Warning: the index file is older than the FASTA file.
WARNING. chromosome (chr10_KI270824v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr10_KI270824v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr14_GL000009v2_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr14_GL000194v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr14_KI270725v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr14_KI270725v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr14_KI270725v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr14_KI270725v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr14_KI270725v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr14_KI270725v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr16_KI270728v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr17_GL000205v2_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr17_GL383563v3_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr17_KI270729v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr17_KI270729v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr17_KI270858v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270706v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270709v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270709v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270709v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270709v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270709v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270709v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270709v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270709v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270709v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270709v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270709v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270709v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270709v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270709v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270709v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270709v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270709v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270712v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270712v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr1_KI270765v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270732v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270732v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270732v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270732v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270732v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270732v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270733v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270733v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270733v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270733v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270733v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270733v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270733v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270733v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270733v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270733v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270733v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270733v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270735v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270735v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270735v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270735v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270735v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270735v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270735v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr22_KI270737v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270772v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270772v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270772v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270772v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270772v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270772v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270772v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270772v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270772v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270772v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270772v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270894v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270894v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270894v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270894v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270894v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270894v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270894v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270894v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270894v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270894v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270894v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr2_KI270894v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr3_GL000221v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr3_GL000221v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr3_GL000221v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr3_GL000221v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr5_GL949742v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr8_KI270813v1_alt) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr9_KI270719v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr9_KI270719v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr9_KI270719v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr9_KI270719v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr9_KI270719v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chr9_KI270720v1_random) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrM) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrM) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000195v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000195v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000195v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000195v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000216v2) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000218v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000219v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000219v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000219v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000219v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000219v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000220v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000220v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000220v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000220v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000220v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000220v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000220v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000220v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000220v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000220v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_GL000220v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270333v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270333v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270336v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270337v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270438v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270438v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270438v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270438v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270442v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270466v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270467v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270467v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270742v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270742v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270742v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270742v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270742v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270742v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270743v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270744v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270746v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270746v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270746v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270749v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270749v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270750v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270751v1) was not found in the FASTA file. Skipping.
WARNING. chromosome (chrUn_KI270751v1) was not found in the FASTA file. Skipping.