; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/12/19/peak-motifs.2025-12-19.115413_2025-12-19.115413_FZ7H1y/results/oligos_6nt_mkv1/peak-motifs_oligos-2str-noov_6nt_mkv1_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2025/12/19/peak-motifs.2025-12-19.115413_2025-12-19.115413_FZ7H1y/results/oligos_6nt_mkv1/peak-motifs_oligos-2str-noov_6nt_mkv1_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/12/19/peak-motifs.2025-12-19.115413_2025-12-19.115413_FZ7H1y/results/oligos_6nt_mkv1/peak-motifs_oligos-2str-noov_6nt_mkv1_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/12/19/peak-motifs.2025-12-19.115413_2025-12-19.115413_FZ7H1y/results/oligos_6nt_mkv1/peak-motifs_oligos-2str-noov_6nt_mkv1_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	0	3	3	44	2	0	2	3	46	2	0	3	7	40
c	0	35	36	0	0	0	43	42	0	3	0	42	35	1
g	2	2	5	2	0	0	1	0	1	0	1	1	2	5
t	46	8	4	2	46	48	2	3	1	43	47	2	4	2
//
; Sites	48
>site_0
TTCATTCCATTCCA
>site_1
TCCATTTCATTCCA
>site_2
TCCATTCCATTTCA
>site_3
TCCATTCCATTCCA
>site_4
TGCTTTCCATTCCA
>site_5
TCCATTCAATTCCG
>site_6
TTGATTCCATTCAA
>site_7
TCAATTCCATTCAA
>site_8
TCCATTCAATTCCA
>site_9
TCCATTCCATTCAA
>site_10
TCCATTCCATTCCA
>site_11
TCCAATCCATTCCA
>site_12
TTGATTCCAATCCA
>site_13
TCTATTCCATTTGG
>site_14
TCCATTCTATTCCA
>site_15
TCCATTCCATTCTA
>site_16
TCAATTCCATTCCA
>site_17
TCCATTCAATTCCA
>site_18
GTAATTCCATTCAA
>site_19
GCCATTTCACTCGG
>site_20
TCCTTTCCATGCCA
>site_21
TCCGTTCCTTTCCA
>site_22
TATATTCCGTTCCT
>site_23
TCTATTCCATTAAA
>site_24
TCCATTCTATTCCA
>site_25
TCCATTCCATTCTA
>site_26
TCCATTCCATTCCA
>site_27
TTGATTCCATTCCA
>site_28
TACATTCCATTCAG
>site_29
TCCATTACATTCCA
>site_30
TGCATTCCATTACA
>site_31
TACATTGCATTCCA
>site_32
TCCATTACATTGCA
>site_33
TCCATTCCATTACA
>site_34
TTGGTTCCATTCCA
>site_35
TCCATTCCACTCTT
>site_36
TCCAATCCATTCCA
>site_37
TCTATTCCAATCCA
>site_38
TCCATTCTATTCCA
>site_39
TCCATTCCATTCTA
>site_40
TTCATTCCATTCCA
>site_41
TTGATTCCATTCCC
>site_42
TCCATTCCACTCAG
>site_43
TCCATTCCATTCCA
>site_44
TCCATTCCATTCCA
>site_45
TCCATTCCATTCCA
>site_46
TCCATTCCATTCCA
>site_47
TCCATTCCATTCCA
a	1	9	0	0	1	13	15	0	0	0	7	4
c	8	1	0	0	15	2	0	13	0	16	4	4
g	4	5	1	0	0	0	0	0	0	0	0	6
t	3	1	15	16	0	1	1	3	16	0	5	2
//
; Sites	16
>site_0
TGTTCAACTCAA
>site_1
GGTTAAACTCCT
>site_2
CATTCAACTCAC
>site_3
TGTTCAACTCAG
>site_4
TAGTCAACTCAC
>site_5
GGTTCAACTCTG
>site_6
CATTCAATTCCG
>site_7
CATTCAACTCTG
>site_8
CATTCAATTCCA
>site_9
CATTCAATTCCA
>site_10
CATTCCACTCTT
>site_11
CATTCCACTCAG
>site_12
CCTTCTACTCTC
>site_13
AATTCAACTCAA
>site_14
GGTTCAACTCTG
>site_15
GTTTCATCTCAC
a	3	35	41	37	41	0	41	0	2	32	36
c	1	2	0	0	0	0	0	1	39	2	1
g	3	4	0	0	0	0	0	0	0	3	1
t	34	0	0	4	0	41	0	40	0	4	3
//
; Sites	41
>site_0
CCAAATATCTG
>site_1
AGAAATACCGT
>site_2
GGAAATATCCT
>site_3
TGAAATATCTT
>site_4
ACAAATATCCC
>site_5
TAAAATATCAA
>site_6
TAAAATATCAA
>site_7
TAAAATATCAA
>site_8
TAATATATCAA
>site_9
TAAAATATCAA
>site_10
TAAAATATCAA
>site_11
TAAAATATCGA
>site_12
GAAAATATCAA
>site_13
TAAAATATATA
>site_14
TAAAATATCAA
>site_15
TAAAATATCAA
>site_16
TAAAATATCAA
>site_17
TAAAATATCAA
>site_18
TAAAATATCAA
>site_19
TAAAATATCAA
>site_20
TAAAATATCAA
>site_21
TAAAATATCAA
>site_22
TGAAATATCAA
>site_23
TAAAATATCAA
>site_24
TAATATATCAA
>site_25
TAATATATCAA
>site_26
TAAAATATCAA
>site_27
TAAAATATCAA
>site_28
TAAAATATCAA
>site_29
TAAAATATCAA
>site_30
TAAAATATCAA
>site_31
TAAAATATATA
>site_32
TAAAATATCAA
>site_33
TAAAATATCAA
>site_34
TAAAATATCGA
>site_35
TAAAATATCAA
>site_36
AAATATATCAA
>site_37
TAAAATATCAA
>site_38
GAAAATATCAA
>site_39
TAAAATATCAA
>site_40
TAAAATATCAA
a	1	0	2	1	8	0	0	0	0	0	3	4	4	4
c	3	4	1	0	0	0	0	8	8	0	4	1	0	0
g	0	0	1	4	0	8	8	0	0	0	0	1	4	3
t	4	4	4	3	0	0	0	0	0	8	1	2	0	1
//
; Sites	8
>site_0
TTTGAGGCCTTCGT
>site_1
ACGAAGGCCTCAAA
>site_2
TTTGAGGCCTAGGG
>site_3
CCCTAGGCCTCAAA
>site_4
CCATAGGCCTCAAA
>site_5
TTTGAGGCCTATGG
>site_6
CCATAGGCCTCAAA
>site_7
TTTGAGGCCTATGG
a	2	1	40	0	39	0	40	40	34	36	4
c	0	3	0	40	1	0	0	0	0	1	1
g	33	3	0	0	0	0	0	0	0	1	0
t	5	33	0	0	0	40	0	0	6	2	35
//
; Sites	40
>site_0
TCACATAAAAA
>site_1
ACACATAAACC
>site_2
TAACATAATAA
>site_3
TGACATAATTA
>site_4
TCACATAAAAA
>site_5
GTACATAAAAT
>site_6
GTACATAAAAT
>site_7
GTACATAATAT
>site_8
GTACATAAAAT
>site_9
GTACATAAAAT
>site_10
GTACATAAAAT
>site_11
GGACATAAAAT
>site_12
GTACATAAAAT
>site_13
GTACATAAAAT
>site_14
GTACATAAAAT
>site_15
GTACATAAAAT
>site_16
GTACATAAAAT
>site_17
GTACATAAAAT
>site_18
GTACATAAAAT
>site_19
GTACATAAAAT
>site_20
GTACATAAAAT
>site_21
GTACATAAAAT
>site_22
ATACATAATTT
>site_23
GTACATAAAAT
>site_24
GTACATAATAT
>site_25
GTACATAATAT
>site_26
GTACATAAAAT
>site_27
TTACATAAAAT
>site_28
GTACATAAAAT
>site_29
GTACATAAAAT
>site_30
GTACATAAAAT
>site_31
GTACATAAAAT
>site_32
GTACATAAAAT
>site_33
GGACATAAAAT
>site_34
GTACATAAAAT
>site_35
GTACATAAAAT
>site_36
GTACCTAAAGT
>site_37
GTACATAAAAT
>site_38
GTACATAAAAT
>site_39
GTACATAAAAT
; Host name	rsat
; Job started	2025-12-19.115420
; Job done	2025-12-19.115420
; Seconds	0.15
;	user	0.15
;	system	0.02
;	cuser	0
;	csystem	0
