; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/12/19/peak-motifs.2025-12-19.115413_2025-12-19.115413_FZ7H1y/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2025/12/19/peak-motifs.2025-12-19.115413_2025-12-19.115413_FZ7H1y/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/12/19/peak-motifs.2025-12-19.115413_2025-12-19.115413_FZ7H1y/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/12/19/peak-motifs.2025-12-19.115413_2025-12-19.115413_FZ7H1y/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	40	2	4	3	46	43	1	3	1	46	45	2	2	8	45
c	1	3	0	1	1	0	1	0	1	1	0	2	5	2	1
g	4	1	37	41	0	2	1	41	43	0	0	0	37	33	0
t	2	41	6	2	0	2	44	3	2	0	2	43	3	4	1
//
; Sites	47
>site_0
ATGAAAGGGAATGTT
>site_1
ATGGAATGGAATGAA
>site_2
ATGGAATGAAATGGA
>site_3
ATGAAATGGAATGGA
>site_4
ATGGAATGGAATGGA
>site_5
ATGGAATGGAAAGCA
>site_6
ACGGAATTGAATGGA
>site_7
ATTGAATGGAATCAA
>site_8
GTTGAATGGAATTGA
>site_9
ATGGAATTGAATGGA
>site_10
ATTGAATGGAATGGA
>site_11
ATGGAATGGAATGGA
>site_12
ATGGAATGGATTGGA
>site_13
ATGGATTGGAATCAA
>site_14
ATGGAATAGAATGGA
>site_15
ATAGAATGGAATGGA
>site_16
ATGGAATGGAATTGA
>site_17
ATGGAATTGAATGGA
>site_18
ATTGAATGGAATTAC
>site_19
GTGAAATGGCATGGA
>site_20
ATGGCATGGAAAGGA
>site_21
ATGGAAAGGAACGGA
>site_22
AAGGAACGGAATATA
>site_23
ATGGAATAGAATGGA
>site_24
ATAGAATGGAATGGA
>site_25
ATGGAATGGAATGGA
>site_26
ATGGAATGGAATCAA
>site_27
ACTGAATGGAATGTA
>site_28
ATGGAATGTAATGGA
>site_29
ATGTAATGGAATGCA
>site_30
ATGGAATGCAATGTA
>site_31
ATGCAATGTAATGGA
>site_32
ATGTAATGGAATGGA
>site_33
ATGGAATGGAACCAA
>site_34
TAAGAGTGGAATGGA
>site_35
GTGGAATGGATTGGA
>site_36
ATGGATTGGAATAGA
>site_37
TTGGAATAGAATGGA
>site_38
ATAGAATGGAATGGA
>site_39
ATGGAATGGAATGAA
>site_40
AGGGAATGGAATCAA
>site_41
CCTGAGTGGAATGGA
>site_42
GTGGAATGGAATGGA
>site_43
ATGGAATGGAATGGA
>site_44
ATGGAATGGAATGGA
>site_45
ATGGAATGGAATGGA
>site_46
ATGGAATGGAATGGA
a	7	1	4	0	11	0	1	1	0	11	10	1	3	1
c	2	4	0	0	0	0	0	0	0	0	1	5	4	5
g	0	4	1	11	0	11	0	0	10	0	0	1	3	1
t	2	2	6	0	0	0	10	10	1	0	0	4	1	4
//
; Sites	11
>site_0
CTTGAGTTGAACAC
>site_1
AAGGAGTTTAACCT
>site_2
AGTGAGTTGAATGC
>site_3
ACTGAGTTGAACAT
>site_4
TGTGAGTTGACTAC
>site_5
ACAGAGTTGAACCT
>site_6
CCAGAGTTGAATGG
>site_7
AGAGAGTAGAAGGA
>site_8
ATTGAGTTGAATTC
>site_9
ACAGAGTTGAACCT
>site_10
TGTGAGATGAAACC
a	3	35	41	37	41	0	41	0	2	32	36
c	1	2	0	0	0	0	0	1	39	2	1
g	3	4	0	0	0	0	0	0	0	3	1
t	34	0	0	4	0	41	0	40	0	4	3
//
; Sites	41
>site_0
CCAAATATCTG
>site_1
AGAAATACCGT
>site_2
GGAAATATCCT
>site_3
TGAAATATCTT
>site_4
ACAAATATCCC
>site_5
TAAAATATCAA
>site_6
TAAAATATCAA
>site_7
TAAAATATCAA
>site_8
TAATATATCAA
>site_9
TAAAATATCAA
>site_10
TAAAATATCAA
>site_11
TAAAATATCGA
>site_12
GAAAATATCAA
>site_13
TAAAATATATA
>site_14
TAAAATATCAA
>site_15
TAAAATATCAA
>site_16
TAAAATATCAA
>site_17
TAAAATATCAA
>site_18
TAAAATATCAA
>site_19
TAAAATATCAA
>site_20
TAAAATATCAA
>site_21
TAAAATATCAA
>site_22
TGAAATATCAA
>site_23
TAAAATATCAA
>site_24
TAATATATCAA
>site_25
TAATATATCAA
>site_26
TAAAATATCAA
>site_27
TAAAATATCAA
>site_28
TAAAATATCAA
>site_29
TAAAATATCAA
>site_30
TAAAATATCAA
>site_31
TAAAATATATA
>site_32
TAAAATATCAA
>site_33
TAAAATATCAA
>site_34
TAAAATATCGA
>site_35
TAAAATATCAA
>site_36
AAATATATCAA
>site_37
TAAAATATCAA
>site_38
GAAAATATCAA
>site_39
TAAAATATCAA
>site_40
TAAAATATCAA
a	0	0	1	0	0	1	0	2	0	0	0	0	0	1	1	1	1	0	0	1
c	1	1	0	1	1	0	0	0	0	0	2	2	0	1	0	0	0	1	1	0
g	0	1	1	0	0	0	1	0	2	2	0	0	0	0	0	1	1	0	1	1
t	1	0	0	1	1	1	1	0	0	0	0	0	2	0	1	0	0	1	0	0
//
; Sites	2
>site_0
TCACCATAGGCCTCAAACCG
>site_1
CGGTTTGAGGCCTATGGTGA
a	41	2	2	61	63	61	0	1	62	0	1	2
c	21	19	57	0	0	1	0	0	0	42	35	36
g	0	2	2	2	0	0	61	0	1	1	21	1
t	1	40	2	0	0	1	2	62	0	20	6	24
//
; Sites	63
>site_0
CACAAAGTAGTT
>site_1
ATCAAAGTACCC
>site_2
CCCAAAGTATGT
>site_3
ATCAAAGTACCC
>site_4
CCCAAAGTATGT
>site_5
ATCAAAGTACCC
>site_6
ATCAAAGTACCC
>site_7
CCCAAAGTATGT
>site_8
ATCAAAGTACCC
>site_9
CCCAAAGTATGT
>site_10
ATCAAAGTACCC
>site_11
ATGAAAGTACCC
>site_12
ATCGAAGTACTC
>site_13
TGTAAAGTACAT
>site_14
ATCAAAGTACCA
>site_15
ATCAAAGTACTC
>site_16
ATCAAAGTACCC
>site_17
CCCAAAGTATGT
>site_18
ATCAATGTACCC
>site_19
CCCAAAGTATGT
>site_20
ATAAAAGTACCC
>site_21
ATCAAAGTACCG
>site_22
ATCAAAGTACCC
>site_23
ATCAAAGTACCC
>site_24
CCCAAAGTATGT
>site_25
ATCAAAGTACCC
>site_26
CCCAAAGTATGT
>site_27
ATCAAAGTACCC
>site_28
CCCAAAGTATGT
>site_29
ATCAAAGTACTC
>site_30
ATCAAAGTACCC
>site_31
AACAAATTACCC
>site_32
ATAAAAGTACCC
>site_33
ATCAACGTACCC
>site_34
CCCAAAGTATGT
>site_35
ATCAAAGTACCC
>site_36
CCCAAAGTATGT
>site_37
ATCAAAGTACGC
>site_38
CGCAAAGTATGT
>site_39
CCCAAAGTATGT
>site_40
ATCAAAGTACCC
>site_41
CCCAAAGTATGT
>site_42
ATCAAAGTACCC
>site_43
CCCAAAGTATGT
>site_44
ATCAAAGTGCCT
>site_45
ATGAAAGTACCC
>site_46
ATCAAAGTACTC
>site_47
ATCAAAGTACCA
>site_48
ATTAAAGTACTC
>site_49
ATCAAATTACCC
>site_50
ATCAAAGTACCC
>site_51
CCCAAAGTATGT
>site_52
ATCGAAGTACCT
>site_53
ATCAAAGTACCC
>site_54
CCCAAAGTATGT
>site_55
ATCAAAGTACCC
>site_56
ATCAAAGTACCC
>site_57
CCCAAAGTATGT
>site_58
ATCAAAGTACCC
>site_59
CCCAAAGTATGT
>site_60
ATCAAAGTACCC
>site_61
CCCAAAGTATGT
>site_62
ATCAAAGAACCC
; Host name	rsat
; Job started	2025-12-19.115424
; Job done	2025-12-19.115424
; Seconds	0.11
;	user	0.11
;	system	0.02
;	cuser	0
;	csystem	0
