AC  M09174_2.00_rc_shift4
XX
ID  HOXC5,NANOGP8,NKX1-1,NKX1-2,TLX1_rc
XX
DE  positions_6nt_m3 versus M09174_2.00_rc (HOXC5,NANOGP8,NKX1-1,NKX1-2,TLX1_rc); m=161/246; ncol2=13; w=-2; offset=-2; strand=R; shift=4; score=0.592608; ----argymATAAATCA
P0           a         c         g         t
1            0         0         0         0
2            0         0         0         0
3            0         0         0         0
4            0         0         0         0
5      43.2264   13.3453   20.3654   23.0629
6      36.8264     9.913   38.2683   14.9923
7       23.746    18.037   50.6883   7.52873
8      13.4032   53.8171   6.26086   26.5189
9      27.8742   52.6736    1.6037   17.8485
10     81.8995       3.4   12.7797   1.92076
11    0.182582   2.35488   1.73206   95.7305
12     69.7455   18.2359    6.2704   5.74821
13     89.2697   3.64301  0.427119    6.6602
14      91.306   4.09728  0.352888   4.24384
15     11.8079  0.751872    4.2011   83.2391
16     4.05357   80.0297   3.89728   12.0194
17     70.8839   6.30114  0.591934   22.2231
XX
CC  shift: 4
CC  consensus.strict: ----aggccATAAATCA
CC  consensus.strict.rc: TGATTTATGGCCT----
CC  consensus.IUPAC: ----argymATAAATCA
CC  consensus.IUPAC.rc: TGATTTATKRCYT----
CC  consensus.regexp: ----a[ag]g[ct][ac]ATAAATCA
CC  consensus.regexp.rc: TGATTTAT[GT][AG]C[CT]T----
CC  description: positions_6nt_m3 versus M09174_2.00_rc (HOXC5,NANOGP8,NKX1-1,NKX1-2,TLX1_rc); m=161/246; ncol2=13; w=-2; offset=-2; strand=R; shift=4; score=0.592608; ----argymATAAATCA
XX
//