One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.175405_2026-01-04.175405_YulKOI/results/discovered_motifs/oligos_6nt_test_vs_ctrl_m4/peak-motifs_oligos_6nt_test_vs_ctrl_m4.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.175405_2026-01-04.175405_YulKOI/results/discovered_motifs/oligos_6nt_test_vs_ctrl_m4/peak-motifs_oligos_6nt_test_vs_ctrl_m4_vs_db_JASPAR2024_CORE_vertebrates_non-redundant

One-to-n matrix alignment; reference matrix: oligos_6nt_test_vs_ctrl_m4_shift6 ; 17 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_test_vs_ctrl_m4_shift6 (oligos_6nt_test_vs_ctrl_m4)
; oligos_6nt_test_vs_ctrl_m4; m=0 (reference); ncol1=10; shift=6; ncol=16; ------ryATGTGCdt ; Alignment reference a 0 0 0 0 0 0 1622 1218 4687 102 176 159 208 87 1434 1234 c 0 0 0 0 0 0 1071 1533 137 576 73 273 55 5079 1165 1150 g 0 0 0 0 0 0 1414 1214 395 73 5022 108 4977 21 1363 1201 t 0 0 0 0 0 0 1224 1366 112 4580 60 4791 91 144 1369 1746

MA2325.1_rc_shift6 (EPAS1_rc)
; oligos_6nt_test_vs_ctrl_m4 versus MA2325.1_rc (EPAS1_rc); m=1/16; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.67162; ------skACGTGCg- ; cor=; Ncor= a 0 0 0 0 0 0 48.0 13.0 583.0 5.0 3.0 1.0 3.0 44.0 100.0 0 c 0 0 0 0 0 0 255.0 43.0 16.0 626.0 6.0 15.0 1.0 545.0 115.0 0 g 0 0 0 0 0 0 323.0 174.0 36.0 2.0 629.0 4.0 635.0 23.0 352.0 0 t 0 0 0 0 0 0 14.0 410.0 5.0 7.0 2.0 620.0 1.0 28.0 73.0 0

MA1560.2_shift6 (SOHLH2)
; oligos_6nt_test_vs_ctrl_m4 versus MA1560.2 (SOHLH2); m=2/16; ncol2=8; w=0; offset=0; strand=D; shift=6; score=0.570062; ------gCACGTGc-- ; cor=; Ncor= a 0 0 0 0 0 0 172.0 45.0 1212.0 0.0 14.0 36.0 41.0 272.0 0 0 c 0 0 0 0 0 0 264.0 1212.0 0.0 1212.0 0.0 65.0 4.0 1212.0 0 0 g 0 0 0 0 0 0 1212.0 29.0 41.0 11.0 1212.0 0.0 1212.0 172.0 0 0 t 0 0 0 0 0 0 276.0 70.0 0.0 7.0 15.0 1212.0 4.0 153.0 0 0

MA1108.3_rc_shift7 (MXI1_rc)
; oligos_6nt_test_vs_ctrl_m4 versus MA1108.3_rc (MXI1_rc); m=3/16; ncol2=6; w=0; offset=1; strand=R; shift=7; score=0.554053; -------CATGTG--- ; cor=; Ncor= a 0 0 0 0 0 0 0 175.0 21541.0 0.0 468.0 7.0 460.0 0 0 0 c 0 0 0 0 0 0 0 21232.0 0.0 1542.0 18.0 170.0 97.0 0 0 0 g 0 0 0 0 0 0 0 114.0 507.0 0.0 21552.0 1.0 21382.0 0 0 0 t 0 0 0 0 0 0 0 527.0 0.0 20506.0 10.0 21870.0 109.0 0 0 0

MA0819.3_shift6 (CLOCK)
; oligos_6nt_test_vs_ctrl_m4 versus MA0819.3 (CLOCK); m=4/16; ncol2=7; w=0; offset=0; strand=D; shift=6; score=0.514584; ------aCACGTG--- ; cor=; Ncor= a 0 0 0 0 0 0 2009.0 146.0 2009.0 0.0 244.0 7.0 5.0 0 0 0 c 0 0 0 0 0 0 584.0 2009.0 3.0 2009.0 11.0 87.0 1.0 0 0 0 g 0 0 0 0 0 0 383.0 0.0 52.0 4.0 2009.0 6.0 2009.0 0 0 0 t 0 0 0 0 0 0 89.0 0.0 0.0 302.0 0.0 2009.0 52.0 0 0 0

MA0692.2_rc_shift5 (TFEB_rc)
; oligos_6nt_test_vs_ctrl_m4 versus MA0692.2_rc (TFEB_rc); m=5/16; ncol2=8; w=-1; offset=-1; strand=R; shift=5; score=0.473218; -----rTCACGTG--- ; cor=; Ncor= a 0 0 0 0 0 2826.0 807.0 11.0 8715.0 5.0 1155.0 274.0 3.0 0 0 0 c 0 0 0 0 0 558.0 872.0 8715.0 150.0 8715.0 83.0 62.0 0.0 0 0 0 g 0 0 0 0 0 5889.0 2342.0 10.0 169.0 288.0 8715.0 286.0 8715.0 0 0 0 t 0 0 0 0 0 283.0 8715.0 9.0 454.0 2762.0 0.0 8715.0 17.0 0 0 0

MA1106.2_shift8 (HIF1A)
; oligos_6nt_test_vs_ctrl_m4 versus MA1106.2 (HIF1A); m=6/16; ncol2=6; w=0; offset=2; strand=D; shift=8; score=0.472247; --------ACGTGC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 976.0 0.0 1.0 2.0 84.0 88.0 0 0 c 0 0 0 0 0 0 0 0 0.0 979.0 0.0 33.0 41.0 837.0 0 0 g 0 0 0 0 0 0 0 0 2.0 0.0 979.0 11.0 844.0 20.0 0 0 t 0 0 0 0 0 0 0 0 2.0 1.0 0.0 934.0 11.0 35.0 0 0

MA0004.1_shift7 (Arnt)
; oligos_6nt_test_vs_ctrl_m4 versus MA0004.1 (Arnt); m=7/16; ncol2=6; w=0; offset=1; strand=D; shift=7; score=0.438619; -------CACGTG--- ; cor=; Ncor= a 0 0 0 0 0 0 0 4.0 19.0 0.0 0.0 0.0 0.0 0 0 0 c 0 0 0 0 0 0 0 16.0 0.0 20.0 0.0 0.0 0.0 0 0 0 g 0 0 0 0 0 0 0 0.0 1.0 0.0 20.0 0.0 20.0 0 0 0 t 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 20.0 0.0 0 0 0

MA1121.2_rc_shift5 (TEAD2_rc)
; oligos_6nt_test_vs_ctrl_m4 versus MA1121.2_rc (TEAD2_rc); m=8/16; ncol2=7; w=-1; offset=-1; strand=R; shift=5; score=0.433611; -----GGAATGT---- ; cor=; Ncor= a 0 0 0 0 0 18.0 24.0 510.0 524.0 9.0 11.0 14.0 0 0 0 0 c 0 0 0 0 0 3.0 10.0 9.0 6.0 11.0 14.0 70.0 0 0 0 0 g 0 0 0 0 0 513.0 500.0 8.0 10.0 5.0 478.0 17.0 0 0 0 0 t 0 0 0 0 0 8.0 8.0 15.0 2.0 517.0 39.0 441.0 0 0 0 0

MA0058.4_rc_shift7 (MAX_rc)
; oligos_6nt_test_vs_ctrl_m4 versus MA0058.4_rc (MAX_rc); m=9/16; ncol2=6; w=0; offset=1; strand=R; shift=7; score=0.433436; -------CACGTG--- ; cor=; Ncor= a 0 0 0 0 0 0 0 36.0 6876.0 19.0 229.0 38.0 0.0 0 0 0 c 0 0 0 0 0 0 0 6876.0 20.0 6876.0 7.0 87.0 0.0 0 0 0 g 0 0 0 0 0 0 0 27.0 159.0 39.0 6876.0 0.0 6876.0 0 0 0 t 0 0 0 0 0 0 0 0.0 69.0 329.0 0.0 6876.0 39.0 0 0 0

MA0738.2_shift10 (HIC2)
; oligos_6nt_test_vs_ctrl_m4 versus MA0738.2 (HIC2); m=10/16; ncol2=6; w=0; offset=4; strand=D; shift=10; score=0.431414; ----------rTGCCM ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 2606.0 0.0 494.0 23.0 435.0 1466.0 c 0 0 0 0 0 0 0 0 0 0 394.0 117.0 354.0 4891.0 4891.0 3425.0 g 0 0 0 0 0 0 0 0 0 0 2285.0 0.0 4891.0 14.0 0.0 0.0 t 0 0 0 0 0 0 0 0 0 0 367.0 4891.0 151.0 0.0 59.0 0.0

MA0825.2_shift7 (MNT)
; oligos_6nt_test_vs_ctrl_m4 versus MA0825.2 (MNT); m=11/16; ncol2=6; w=0; offset=1; strand=D; shift=7; score=0.430336; -------CACGTG--- ; cor=; Ncor= a 0 0 0 0 0 0 0 27.0 681.0 0.0 15.0 0.0 0.0 0 0 0 c 0 0 0 0 0 0 0 681.0 0.0 681.0 0.0 0.0 0.0 0 0 0 g 0 0 0 0 0 0 0 0.0 0.0 7.0 681.0 15.0 681.0 0 0 0 t 0 0 0 0 0 0 0 5.0 21.0 16.0 0.0 681.0 25.0 0 0 0

MA0622.2_shift7 (Mlxip)
; oligos_6nt_test_vs_ctrl_m4 versus MA0622.2 (Mlxip); m=12/16; ncol2=6; w=0; offset=1; strand=D; shift=7; score=0.426619; -------CACGTG--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.0 999.0 0.0 0.0 0.0 0.0 0 0 0 c 0 0 0 0 0 0 0 999.0 0.0 999.0 0.0 0.0 0.0 0 0 0 g 0 0 0 0 0 0 0 0.0 0.0 0.0 999.0 0.0 999.0 0 0 0 t 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 999.0 0.0 0 0 0

MA0727.2_shift0 (NR3C2)
; oligos_6nt_test_vs_ctrl_m4 versus MA0727.2 (NR3C2); m=13/16; ncol2=15; w=-6; offset=-6; strand=D; shift=0; score=0.41847; rGwACAywrTGTwCy- ; cor=; Ncor= a 15033.0 57.0 17523.0 30042.0 0.0 33515.0 7347.0 17996.0 22920.0 401.0 0.0 4.0 13789.0 16.0 560.0 0 c 226.0 8.0 1377.0 15.0 49953.0 28.0 18273.0 4833.0 1933.0 996.0 9.0 23.0 7366.0 42687.0 25680.0 0 g 26931.0 55731.0 6650.0 13.0 5.0 1053.0 3144.0 8538.0 14022.0 22.0 58888.0 3.0 1346.0 9.0 582.0 0 t 535.0 60.0 13654.0 9.0 0.0 221.0 16489.0 11062.0 4023.0 43465.0 0.0 44513.0 18547.0 83.0 16504.0 0

MA0113.4_shift0 (NR3C1)
; oligos_6nt_test_vs_ctrl_m4 versus MA0113.4 (NR3C1); m=14/16; ncol2=15; w=-6; offset=-6; strand=D; shift=0; score=0.414127; rGwACAywrTGTwCy- ; cor=; Ncor= a 8885.0 40.0 8932.0 18207.0 0.0 18421.0 2470.0 7736.0 11413.0 81.0 0.0 8.0 8832.0 33.0 234.0 0 c 107.0 7.0 599.0 8.0 24481.0 18.0 9569.0 3656.0 964.0 565.0 11.0 9.0 3149.0 24380.0 14665.0 0 g 12768.0 27337.0 2854.0 9.0 14.0 698.0 1583.0 5589.0 7861.0 50.0 27160.0 50.0 648.0 5.0 188.0 0 t 225.0 38.0 10448.0 10.0 0.0 71.0 10711.0 5972.0 1822.0 23751.0 5.0 24434.0 10375.0 58.0 9821.0 0

MA2327.1_shift3 (PGR)
; oligos_6nt_test_vs_ctrl_m4 versus MA2327.1 (PGR); m=15/16; ncol2=9; w=-3; offset=-3; strand=D; shift=3; score=0.404481; ---ACAkwmTGT---- ; cor=; Ncor= a 0 0 0 29390.0 299.0 27485.0 5276.0 8275.0 8527.0 328.0 765.0 173.0 0 0 0 0 c 0 0 0 121.0 28612.0 363.0 6470.0 6654.0 9602.0 1695.0 185.0 190.0 0 0 0 0 g 0 0 0 189.0 185.0 1689.0 9598.0 6656.0 6465.0 364.0 28617.0 122.0 0 0 0 0 t 0 0 0 164.0 768.0 327.0 8520.0 8279.0 5270.0 27477.0 297.0 29379.0 0 0 0 0

MA1155.1_rc_shift0 (ZSCAN4_rc)
; oligos_6nt_test_vs_ctrl_m4 versus MA1155.1_rc (ZSCAN4_rc); m=16/16; ncol2=15; w=-6; offset=-6; strand=R; shift=0; score=0.403908; tTTtCAGkGTGTGCa- ; cor=; Ncor= a 229.0 1.0 6.0 362.0 218.0 1699.0 2.0 8.0 73.0 2.0 0.0 2.0 0.0 0.0 1373.0 0 c 365.0 2.0 0.0 230.0 1873.0 75.0 0.0 320.0 0.0 2.0 0.0 0.0 1.0 1737.0 112.0 0 g 200.0 0.0 279.0 107.0 50.0 11.0 1684.0 374.0 1702.0 0.0 1665.0 0.0 1676.0 2.0 383.0 0 t 1000.0 1269.0 1225.0 1118.0 3.0 8.0 7.0 772.0 3.0 1281.0 0.0 1292.0 0.0 290.0 257.0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_test_vs_ctrl_m4_shift6 (oligos_6nt_test_vs_ctrl_m4)				; oligos_6nt_test_vs_ctrl_m4; m=0 (reference); ncol1=10; shift=6; ncol=16; ------ryATGTGCdt ; Alignment reference a 0 0 0 0 0 0 1622 1218 4687 102 176 159 208 87 1434 1234 c 0 0 0 0 0 0 1071 1533 137 576 73 273 55 5079 1165 1150 g 0 0 0 0 0 0 1414 1214 395 73 5022 108 4977 21 1363 1201 t 0 0 0 0 0 0 1224 1366 112 4580 60 4791 91 144 1369 1746
MA2325.1_rc_shift6 (EPAS1_rc)				; oligos_6nt_test_vs_ctrl_m4 versus MA2325.1_rc (EPAS1_rc); m=1/16; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.67162; ------skACGTGCg- ; cor=; Ncor= a 0 0 0 0 0 0 48.0 13.0 583.0 5.0 3.0 1.0 3.0 44.0 100.0 0 c 0 0 0 0 0 0 255.0 43.0 16.0 626.0 6.0 15.0 1.0 545.0 115.0 0 g 0 0 0 0 0 0 323.0 174.0 36.0 2.0 629.0 4.0 635.0 23.0 352.0 0 t 0 0 0 0 0 0 14.0 410.0 5.0 7.0 2.0 620.0 1.0 28.0 73.0 0
MA1560.2_shift6 (SOHLH2)				; oligos_6nt_test_vs_ctrl_m4 versus MA1560.2 (SOHLH2); m=2/16; ncol2=8; w=0; offset=0; strand=D; shift=6; score=0.570062; ------gCACGTGc-- ; cor=; Ncor= a 0 0 0 0 0 0 172.0 45.0 1212.0 0.0 14.0 36.0 41.0 272.0 0 0 c 0 0 0 0 0 0 264.0 1212.0 0.0 1212.0 0.0 65.0 4.0 1212.0 0 0 g 0 0 0 0 0 0 1212.0 29.0 41.0 11.0 1212.0 0.0 1212.0 172.0 0 0 t 0 0 0 0 0 0 276.0 70.0 0.0 7.0 15.0 1212.0 4.0 153.0 0 0
MA1108.3_rc_shift7 (MXI1_rc)				; oligos_6nt_test_vs_ctrl_m4 versus MA1108.3_rc (MXI1_rc); m=3/16; ncol2=6; w=0; offset=1; strand=R; shift=7; score=0.554053; -------CATGTG--- ; cor=; Ncor= a 0 0 0 0 0 0 0 175.0 21541.0 0.0 468.0 7.0 460.0 0 0 0 c 0 0 0 0 0 0 0 21232.0 0.0 1542.0 18.0 170.0 97.0 0 0 0 g 0 0 0 0 0 0 0 114.0 507.0 0.0 21552.0 1.0 21382.0 0 0 0 t 0 0 0 0 0 0 0 527.0 0.0 20506.0 10.0 21870.0 109.0 0 0 0
MA0819.3_shift6 (CLOCK)				; oligos_6nt_test_vs_ctrl_m4 versus MA0819.3 (CLOCK); m=4/16; ncol2=7; w=0; offset=0; strand=D; shift=6; score=0.514584; ------aCACGTG--- ; cor=; Ncor= a 0 0 0 0 0 0 2009.0 146.0 2009.0 0.0 244.0 7.0 5.0 0 0 0 c 0 0 0 0 0 0 584.0 2009.0 3.0 2009.0 11.0 87.0 1.0 0 0 0 g 0 0 0 0 0 0 383.0 0.0 52.0 4.0 2009.0 6.0 2009.0 0 0 0 t 0 0 0 0 0 0 89.0 0.0 0.0 302.0 0.0 2009.0 52.0 0 0 0
MA0692.2_rc_shift5 (TFEB_rc)				; oligos_6nt_test_vs_ctrl_m4 versus MA0692.2_rc (TFEB_rc); m=5/16; ncol2=8; w=-1; offset=-1; strand=R; shift=5; score=0.473218; -----rTCACGTG--- ; cor=; Ncor= a 0 0 0 0 0 2826.0 807.0 11.0 8715.0 5.0 1155.0 274.0 3.0 0 0 0 c 0 0 0 0 0 558.0 872.0 8715.0 150.0 8715.0 83.0 62.0 0.0 0 0 0 g 0 0 0 0 0 5889.0 2342.0 10.0 169.0 288.0 8715.0 286.0 8715.0 0 0 0 t 0 0 0 0 0 283.0 8715.0 9.0 454.0 2762.0 0.0 8715.0 17.0 0 0 0
MA1106.2_shift8 (HIF1A)				; oligos_6nt_test_vs_ctrl_m4 versus MA1106.2 (HIF1A); m=6/16; ncol2=6; w=0; offset=2; strand=D; shift=8; score=0.472247; --------ACGTGC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 976.0 0.0 1.0 2.0 84.0 88.0 0 0 c 0 0 0 0 0 0 0 0 0.0 979.0 0.0 33.0 41.0 837.0 0 0 g 0 0 0 0 0 0 0 0 2.0 0.0 979.0 11.0 844.0 20.0 0 0 t 0 0 0 0 0 0 0 0 2.0 1.0 0.0 934.0 11.0 35.0 0 0
MA0004.1_shift7 (Arnt)				; oligos_6nt_test_vs_ctrl_m4 versus MA0004.1 (Arnt); m=7/16; ncol2=6; w=0; offset=1; strand=D; shift=7; score=0.438619; -------CACGTG--- ; cor=; Ncor= a 0 0 0 0 0 0 0 4.0 19.0 0.0 0.0 0.0 0.0 0 0 0 c 0 0 0 0 0 0 0 16.0 0.0 20.0 0.0 0.0 0.0 0 0 0 g 0 0 0 0 0 0 0 0.0 1.0 0.0 20.0 0.0 20.0 0 0 0 t 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 20.0 0.0 0 0 0
MA1121.2_rc_shift5 (TEAD2_rc)				; oligos_6nt_test_vs_ctrl_m4 versus MA1121.2_rc (TEAD2_rc); m=8/16; ncol2=7; w=-1; offset=-1; strand=R; shift=5; score=0.433611; -----GGAATGT---- ; cor=; Ncor= a 0 0 0 0 0 18.0 24.0 510.0 524.0 9.0 11.0 14.0 0 0 0 0 c 0 0 0 0 0 3.0 10.0 9.0 6.0 11.0 14.0 70.0 0 0 0 0 g 0 0 0 0 0 513.0 500.0 8.0 10.0 5.0 478.0 17.0 0 0 0 0 t 0 0 0 0 0 8.0 8.0 15.0 2.0 517.0 39.0 441.0 0 0 0 0
MA0058.4_rc_shift7 (MAX_rc)				; oligos_6nt_test_vs_ctrl_m4 versus MA0058.4_rc (MAX_rc); m=9/16; ncol2=6; w=0; offset=1; strand=R; shift=7; score=0.433436; -------CACGTG--- ; cor=; Ncor= a 0 0 0 0 0 0 0 36.0 6876.0 19.0 229.0 38.0 0.0 0 0 0 c 0 0 0 0 0 0 0 6876.0 20.0 6876.0 7.0 87.0 0.0 0 0 0 g 0 0 0 0 0 0 0 27.0 159.0 39.0 6876.0 0.0 6876.0 0 0 0 t 0 0 0 0 0 0 0 0.0 69.0 329.0 0.0 6876.0 39.0 0 0 0
MA0738.2_shift10 (HIC2)				; oligos_6nt_test_vs_ctrl_m4 versus MA0738.2 (HIC2); m=10/16; ncol2=6; w=0; offset=4; strand=D; shift=10; score=0.431414; ----------rTGCCM ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 2606.0 0.0 494.0 23.0 435.0 1466.0 c 0 0 0 0 0 0 0 0 0 0 394.0 117.0 354.0 4891.0 4891.0 3425.0 g 0 0 0 0 0 0 0 0 0 0 2285.0 0.0 4891.0 14.0 0.0 0.0 t 0 0 0 0 0 0 0 0 0 0 367.0 4891.0 151.0 0.0 59.0 0.0
MA0825.2_shift7 (MNT)				; oligos_6nt_test_vs_ctrl_m4 versus MA0825.2 (MNT); m=11/16; ncol2=6; w=0; offset=1; strand=D; shift=7; score=0.430336; -------CACGTG--- ; cor=; Ncor= a 0 0 0 0 0 0 0 27.0 681.0 0.0 15.0 0.0 0.0 0 0 0 c 0 0 0 0 0 0 0 681.0 0.0 681.0 0.0 0.0 0.0 0 0 0 g 0 0 0 0 0 0 0 0.0 0.0 7.0 681.0 15.0 681.0 0 0 0 t 0 0 0 0 0 0 0 5.0 21.0 16.0 0.0 681.0 25.0 0 0 0
MA0622.2_shift7 (Mlxip)				; oligos_6nt_test_vs_ctrl_m4 versus MA0622.2 (Mlxip); m=12/16; ncol2=6; w=0; offset=1; strand=D; shift=7; score=0.426619; -------CACGTG--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.0 999.0 0.0 0.0 0.0 0.0 0 0 0 c 0 0 0 0 0 0 0 999.0 0.0 999.0 0.0 0.0 0.0 0 0 0 g 0 0 0 0 0 0 0 0.0 0.0 0.0 999.0 0.0 999.0 0 0 0 t 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 999.0 0.0 0 0 0
MA0727.2_shift0 (NR3C2)				; oligos_6nt_test_vs_ctrl_m4 versus MA0727.2 (NR3C2); m=13/16; ncol2=15; w=-6; offset=-6; strand=D; shift=0; score=0.41847; rGwACAywrTGTwCy- ; cor=; Ncor= a 15033.0 57.0 17523.0 30042.0 0.0 33515.0 7347.0 17996.0 22920.0 401.0 0.0 4.0 13789.0 16.0 560.0 0 c 226.0 8.0 1377.0 15.0 49953.0 28.0 18273.0 4833.0 1933.0 996.0 9.0 23.0 7366.0 42687.0 25680.0 0 g 26931.0 55731.0 6650.0 13.0 5.0 1053.0 3144.0 8538.0 14022.0 22.0 58888.0 3.0 1346.0 9.0 582.0 0 t 535.0 60.0 13654.0 9.0 0.0 221.0 16489.0 11062.0 4023.0 43465.0 0.0 44513.0 18547.0 83.0 16504.0 0
MA0113.4_shift0 (NR3C1)				; oligos_6nt_test_vs_ctrl_m4 versus MA0113.4 (NR3C1); m=14/16; ncol2=15; w=-6; offset=-6; strand=D; shift=0; score=0.414127; rGwACAywrTGTwCy- ; cor=; Ncor= a 8885.0 40.0 8932.0 18207.0 0.0 18421.0 2470.0 7736.0 11413.0 81.0 0.0 8.0 8832.0 33.0 234.0 0 c 107.0 7.0 599.0 8.0 24481.0 18.0 9569.0 3656.0 964.0 565.0 11.0 9.0 3149.0 24380.0 14665.0 0 g 12768.0 27337.0 2854.0 9.0 14.0 698.0 1583.0 5589.0 7861.0 50.0 27160.0 50.0 648.0 5.0 188.0 0 t 225.0 38.0 10448.0 10.0 0.0 71.0 10711.0 5972.0 1822.0 23751.0 5.0 24434.0 10375.0 58.0 9821.0 0
MA2327.1_shift3 (PGR)				; oligos_6nt_test_vs_ctrl_m4 versus MA2327.1 (PGR); m=15/16; ncol2=9; w=-3; offset=-3; strand=D; shift=3; score=0.404481; ---ACAkwmTGT---- ; cor=; Ncor= a 0 0 0 29390.0 299.0 27485.0 5276.0 8275.0 8527.0 328.0 765.0 173.0 0 0 0 0 c 0 0 0 121.0 28612.0 363.0 6470.0 6654.0 9602.0 1695.0 185.0 190.0 0 0 0 0 g 0 0 0 189.0 185.0 1689.0 9598.0 6656.0 6465.0 364.0 28617.0 122.0 0 0 0 0 t 0 0 0 164.0 768.0 327.0 8520.0 8279.0 5270.0 27477.0 297.0 29379.0 0 0 0 0
MA1155.1_rc_shift0 (ZSCAN4_rc)				; oligos_6nt_test_vs_ctrl_m4 versus MA1155.1_rc (ZSCAN4_rc); m=16/16; ncol2=15; w=-6; offset=-6; strand=R; shift=0; score=0.403908; tTTtCAGkGTGTGCa- ; cor=; Ncor= a 229.0 1.0 6.0 362.0 218.0 1699.0 2.0 8.0 73.0 2.0 0.0 2.0 0.0 0.0 1373.0 0 c 365.0 2.0 0.0 230.0 1873.0 75.0 0.0 320.0 0.0 2.0 0.0 0.0 1.0 1737.0 112.0 0 g 200.0 0.0 279.0 107.0 50.0 11.0 1684.0 374.0 1702.0 0.0 1665.0 0.0 1676.0 2.0 383.0 0 t 1000.0 1269.0 1225.0 1118.0 3.0 8.0 7.0 772.0 3.0 1281.0 0.0 1292.0 0.0 290.0 257.0 0