One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.175405_2026-01-04.175405_YulKOI/results/discovered_motifs/oligos_6nt_test_vs_ctrl_m5/peak-motifs_oligos_6nt_test_vs_ctrl_m5.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.175405_2026-01-04.175405_YulKOI/results/discovered_motifs/oligos_6nt_test_vs_ctrl_m5/peak-motifs_oligos_6nt_test_vs_ctrl_m5_vs_db_JASPAR2024_CORE_vertebrates_non-redundant

One-to-n matrix alignment; reference matrix: oligos_6nt_test_vs_ctrl_m5_shift0 ; 100 matrices ; sort_field=Ncor

Matrix nameAligned logoscor Ncor Aligned matrices
oligos_6nt_test_vs_ctrl_m5_shift0 (oligos_6nt_test_vs_ctrl_m5)     
; oligos_6nt_test_vs_ctrl_m5; m=0 (reference); ncol1=11; shift=0; ncol=11; wwAGCTAATww
; Alignment reference
a	2105	1768	6036	373	681	330	6023	5704	290	2389	2096
c	1159	1421	57	251	5390	153	208	347	216	969	1486
g	1455	1138	234	5702	326	97	180	235	175	1318	944
t	2040	2432	432	433	362	6179	348	473	6078	2083	2233
MA1480.2_shift2 (DPRX) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1480.2 (DPRX); m=1/99; ncol2=9; w=0; offset=2; strand=D; shift=2; score=0.627569; --aGmTAATCy
; cor=; Ncor=
a	0	0	4696.0	936.0	5801.0	0.0	8562.0	8562.0	0.0	1014.0	303.0
c	0	0	1411.0	1011.0	2761.0	0.0	1730.0	0.0	0.0	8562.0	8562.0
g	0	0	1509.0	8562.0	110.0	0.0	1121.0	0.0	198.0	222.0	754.0
t	0	0	945.0	437.0	370.0	8562.0	1071.0	0.0	8562.0	350.0	3231.0
MA0793.2_shift2 (POU6F2) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0793.2 (POU6F2); m=2/99; ncol2=9; w=0; offset=2; strand=D; shift=2; score=0.591694; --asCTmATTA
; cor=; Ncor=
a	0	0	1848.0	714.0	239.0	75.0	1192.0	3297.0	0.0	0.0	3297.0
c	0	0	321.0	1181.0	3297.0	64.0	2105.0	75.0	4.0	12.0	27.0
g	0	0	582.0	2116.0	219.0	114.0	50.0	0.0	0.0	41.0	22.0
t	0	0	546.0	266.0	257.0	3297.0	81.0	21.0	3297.0	3297.0	53.0
MA1963.2_shift4 (SATB1) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1963.2 (SATB1); m=3/99; ncol2=7; w=0; offset=4; strand=D; shift=4; score=0.570398; ----CTAATAA
; cor=; Ncor=
a	0	0	0	0	262.0	492.0	33670.0	32708.0	288.0	32009.0	30660.0
c	0	0	0	0	33122.0	195.0	164.0	115.0	128.0	485.0	881.0
g	0	0	0	0	140.0	37.0	221.0	120.0	123.0	889.0	1071.0
t	0	0	0	0	700.0	33500.0	169.0	1281.0	33685.0	841.0	1612.0
MA0726.2_shift4 (VSX2) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0726.2 (VSX2); m=4/99; ncol2=7; w=0; offset=4; strand=D; shift=4; score=0.541776; ----yTAATTA
; cor=; Ncor=
a	0	0	0	0	427.0	1080.0	13809.0	13809.0	118.0	626.0	13809.0
c	0	0	0	0	9554.0	2725.0	397.0	124.0	186.0	567.0	321.0
g	0	0	0	0	445.0	363.0	343.0	123.0	92.0	447.0	2109.0
t	0	0	0	0	4255.0	13809.0	402.0	63.0	13809.0	13809.0	1014.0
MA0725.2_shift4 (VSX1) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0725.2 (VSX1); m=5/99; ncol2=7; w=0; offset=4; strand=D; shift=4; score=0.539648; ----yTAATTA
; cor=; Ncor=
a	0	0	0	0	756.0	1836.0	13572.0	13572.0	172.0	898.0	13572.0
c	0	0	0	0	8453.0	3131.0	626.0	154.0	199.0	761.0	516.0
g	0	0	0	0	561.0	572.0	553.0	172.0	103.0	984.0	3337.0
t	0	0	0	0	5119.0	13572.0	554.0	90.0	13572.0	13572.0	1372.0
MA0722.2_shift4 (VAX1) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0722.2 (VAX1); m=6/99; ncol2=7; w=0; offset=4; strand=D; shift=4; score=0.534331; ----yTAATtA
; cor=; Ncor=
a	0	0	0	0	447.0	679.0	5253.0	5253.0	297.0	508.0	5253.0
c	0	0	0	0	2775.0	995.0	863.0	153.0	86.0	321.0	87.0
g	0	0	0	0	455.0	101.0	189.0	46.0	213.0	1951.0	1332.0
t	0	0	0	0	2479.0	5253.0	302.0	133.0	5253.0	5253.0	398.0
MA0035.5_shift4 (GATA1) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0035.5 (GATA1); m=7/99; ncol2=7; w=0; offset=4; strand=D; shift=4; score=0.519104; ----CTWATCT
; cor=; Ncor=
a	0	0	0	0	3953.0	1314.0	49692.0	67550.0	2206.0	2567.0	7397.0
c	0	0	0	0	62419.0	595.0	710.0	1292.0	1238.0	65937.0	3025.0
g	0	0	0	0	2712.0	652.0	856.0	988.0	618.0	1471.0	765.0
t	0	0	0	0	2744.0	69267.0	20570.0	1998.0	67766.0	1853.0	60641.0
MA0912.2_shift4 (HOXD3) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0912.2 (HOXD3); m=8/99; ncol2=8; w=0; offset=4; strand=D; shift=4; score=0.517537; ----CTAATTA
; cor=; Ncor=
a	0	0	0	0	276.0	0.0	14562.0	14562.0	0.0	0.0	14562.0
c	0	0	0	0	11615.0	94.0	742.0	0.0	0.0	0.0	0.0
g	0	0	0	0	827.0	0.0	0.0	0.0	0.0	4453.0	2198.0
t	0	0	0	0	2947.0	14562.0	0.0	0.0	14562.0	14562.0	0.0
MA1608.2_rc_shift4 (Isl1_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1608.2_rc (Isl1_rc); m=9/99; ncol2=7; w=0; offset=4; strand=R; shift=4; score=0.516699; ----cTAATGG
; cor=; Ncor=
a	0	0	0	0	436.0	110.0	5430.0	5482.0	32.0	266.0	379.0
c	0	0	0	0	3702.0	20.0	39.0	34.0	99.0	54.0	192.0
g	0	0	0	0	410.0	45.0	104.0	54.0	30.0	4885.0	4710.0
t	0	0	0	0	1089.0	5462.0	64.0	67.0	5476.0	432.0	356.0
MA1518.3_rc_shift3 (Lhx1_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1518.3_rc (Lhx1_rc); m=10/99; ncol2=10; w=0; offset=3; strand=R; shift=3; score=0.516423; ---gcTAATTA
; cor=; Ncor=
a	0	0	0	45.0	36.0	13.0	407.0	438.0	10.0	3.0	411.0
c	0	0	0	59.0	260.0	24.0	28.0	1.0	5.0	16.0	6.0
g	0	0	0	276.0	64.0	5.0	16.0	5.0	2.0	30.0	24.0
t	0	0	0	74.0	94.0	412.0	3.0	10.0	437.0	405.0	13.0
MA0661.2_shift4 (MEOX1) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0661.2 (MEOX1); m=11/99; ncol2=7; w=0; offset=4; strand=D; shift=4; score=0.511165; ----sTAATTA
; cor=; Ncor=
a	0	0	0	0	150.0	64.0	3000.0	3000.0	8.0	14.0	3000.0
c	0	0	0	0	1637.0	406.0	848.0	0.0	29.0	242.0	0.0
g	0	0	0	0	1363.0	53.0	151.0	2.0	0.0	328.0	338.0
t	0	0	0	0	115.0	3000.0	39.0	3.0	3000.0	3000.0	6.0
MA0701.3_shift4 (LHX9) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0701.3 (LHX9); m=12/99; ncol2=7; w=0; offset=4; strand=D; shift=4; score=0.509495; ----CyAATTA
; cor=; Ncor=
a	0	0	0	0	390.0	0.0	6075.0	6075.0	0.0	0.0	6075.0
c	0	0	0	0	6075.0	2093.0	505.0	0.0	0.0	0.0	0.0
g	0	0	0	0	1056.0	0.0	0.0	0.0	0.0	170.0	305.0
t	0	0	0	0	1219.0	3983.0	20.0	0.0	6075.0	6075.0	0.0
MA0903.2_rc_shift5 (HOXB3_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0903.2_rc (HOXB3_rc); m=13/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.509203; -----TAATkr
; cor=; Ncor=
a	0	0	0	0	0	574.0	12899.0	12899.0	242.0	697.0	7920.0
c	0	0	0	0	0	0.0	0.0	0.0	640.0	838.0	604.0
g	0	0	0	0	0	119.0	839.0	150.0	545.0	5106.0	4979.0
t	0	0	0	0	0	12899.0	441.0	0.0	12899.0	7793.0	1744.0
MA0075.4_shift4 (PRRX2) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0075.4 (PRRX2); m=14/99; ncol2=7; w=0; offset=4; strand=D; shift=4; score=0.508859; ----cyAATTA
; cor=; Ncor=
a	0	0	0	0	778.0	122.0	6720.0	6720.0	0.0	0.0	6720.0
c	0	0	0	0	6720.0	2008.0	29.0	0.0	0.0	0.0	1.0
g	0	0	0	0	1613.0	131.0	3.0	0.0	0.0	0.0	399.0
t	0	0	0	0	1933.0	4711.0	0.0	0.0	6720.0	6720.0	0.0
MA0887.2_rc_shift5 (EVX1_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0887.2_rc (EVX1_rc); m=15/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.506285; -----TAATta
; cor=; Ncor=
a	0	0	0	0	0	172.0	7894.0	7894.0	0.0	358.0	7894.0
c	0	0	0	0	0	725.0	171.0	267.0	236.0	1885.0	269.0
g	0	0	0	0	0	14.0	463.0	67.0	29.0	1752.0	2343.0
t	0	0	0	0	0	7894.0	232.0	0.0	7894.0	3899.0	1196.0
MA0888.2_rc_shift5 (EVX2_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0888.2_rc (EVX2_rc); m=16/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.505613; -----TAATtA
; cor=; Ncor=
a	0	0	0	0	0	446.0	20419.0	20419.0	0.0	752.0	20419.0
c	0	0	0	0	0	1559.0	445.0	702.0	881.0	4541.0	969.0
g	0	0	0	0	0	0.0	863.0	166.0	156.0	5018.0	5669.0
t	0	0	0	0	0	20419.0	303.0	5.0	20419.0	10108.0	2541.0
MA0892.2_rc_shift5 (GSX1_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0892.2_rc (GSX1_rc); m=17/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.505446; -----TAATkr
; cor=; Ncor=
a	0	0	0	0	0	103.0	1183.0	1183.0	50.0	177.0	733.0
c	0	0	0	0	0	9.0	0.0	3.0	123.0	60.0	48.0
g	0	0	0	0	0	0.0	106.0	79.0	106.0	402.0	450.0
t	0	0	0	0	0	1183.0	106.0	90.0	1183.0	781.0	124.0
MA0675.2_rc_shift5 (NKX6-2_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0675.2_rc (NKX6-2_rc); m=18/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.504307; -----TAATkr
; cor=; Ncor=
a	0	0	0	0	0	678.0	18935.0	18935.0	546.0	2582.0	11104.0
c	0	0	0	0	0	775.0	551.0	0.0	191.0	1053.0	814.0
g	0	0	0	0	0	370.0	2233.0	0.0	310.0	7581.0	7831.0
t	0	0	0	0	0	18935.0	2468.0	584.0	18935.0	11354.0	1172.0
MA0132.3_rc_shift5 (PDX1_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0132.3_rc (PDX1_rc); m=19/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.500641; -----TAATkr
; cor=; Ncor=
a	0	0	0	0	0	0.0	7130.0	7130.0	0.0	78.0	4661.0
c	0	0	0	0	0	0.0	0.0	0.0	0.0	185.0	0.0
g	0	0	0	0	0	0.0	0.0	0.0	45.0	2291.0	2469.0
t	0	0	0	0	0	7130.0	0.0	0.0	7130.0	4839.0	292.0
MA1463.2_shift4 (ARGFX) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1463.2 (ARGFX); m=20/99; ncol2=8; w=0; offset=4; strand=D; shift=4; score=0.49975; ----cTAATTA
; cor=; Ncor=
a	0	0	0	0	2558.0	270.0	16589.0	16589.0	0.0	0.0	16589.0
c	0	0	0	0	16589.0	1130.0	46.0	0.0	0.0	44.0	499.0
g	0	0	0	0	1748.0	96.0	0.0	0.0	0.0	0.0	1492.0
t	0	0	0	0	4423.0	16589.0	4.0	0.0	16589.0	16589.0	1048.0
MA2119.1_shift4 (HOXA3) 
; oligos_6nt_test_vs_ctrl_m5 versus MA2119.1 (HOXA3); m=21/99; ncol2=7; w=0; offset=4; strand=D; shift=4; score=0.498221; ----sTMATTA
; cor=; Ncor=
a	0	0	0	0	93.0	0.0	2540.0	2540.0	0.0	0.0	2540.0
c	0	0	0	0	1246.0	502.0	1022.0	0.0	0.0	0.0	0.0
g	0	0	0	0	1294.0	0.0	10.0	0.0	0.0	517.0	361.0
t	0	0	0	0	138.0	2540.0	0.0	0.0	2540.0	2540.0	0.0
MA1498.3_rc_shift5 (HOXA7_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1498.3_rc (HOXA7_rc); m=22/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.497579; -----TAATkr
; cor=; Ncor=
a	0	0	0	0	0	806.0	8075.0	8075.0	306.0	815.0	3085.0
c	0	0	0	0	0	252.0	0.0	0.0	622.0	525.0	310.0
g	0	0	0	0	0	478.0	439.0	0.0	199.0	3628.0	4990.0
t	0	0	0	0	0	8075.0	994.0	2.0	8075.0	4447.0	1082.0
MA0710.2_shift4 (NOTO) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0710.2 (NOTO); m=23/99; ncol2=7; w=0; offset=4; strand=D; shift=4; score=0.497289; ----ytMATTA
; cor=; Ncor=
a	0	0	0	0	774.0	7097.0	15096.0	21405.0	0.0	374.0	21405.0
c	0	0	0	0	13986.0	4001.0	6310.0	0.0	0.0	62.0	0.0
g	0	0	0	0	617.0	573.0	0.0	0.0	0.0	422.0	2057.0
t	0	0	0	0	7419.0	21405.0	139.0	0.0	21405.0	21405.0	1904.0
MA0876.2_rc_shift5 (BSX_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0876.2_rc (BSX_rc); m=24/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.497156; -----TAATkr
; cor=; Ncor=
a	0	0	0	0	0	0.0	8832.0	8832.0	66.0	116.0	3247.0
c	0	0	0	0	0	0.0	0.0	0.0	1078.0	2197.0	103.0
g	0	0	0	0	0	0.0	0.0	0.0	194.0	2483.0	5585.0
t	0	0	0	0	0	8832.0	96.0	0.0	8832.0	4036.0	688.0
MA0630.2_shift5 (SHOX) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0630.2 (SHOX); m=25/99; ncol2=6; w=0; offset=5; strand=D; shift=5; score=0.495581; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	74.0	852.0	991.0	15.0	98.0	416.0
c	0	0	0	0	0	30.0	48.0	2.0	15.0	50.0	48.0
g	0	0	0	0	0	9.0	55.0	5.0	27.0	84.0	424.0
t	0	0	0	0	0	886.0	45.0	2.0	943.0	768.0	111.0
MA0723.3_rc_shift5 (VAX2_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0723.3_rc (VAX2_rc); m=26/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.49406; -----TAATtr
; cor=; Ncor=
a	0	0	0	0	0	1082.0	13498.0	13498.0	1850.0	2652.0	7807.0
c	0	0	0	0	0	0.0	2988.0	0.0	0.0	962.0	117.0
g	0	0	0	0	0	0.0	133.0	0.0	422.0	5627.0	5691.0
t	0	0	0	0	0	13498.0	1361.0	357.0	13498.0	13498.0	857.0
MA0875.2_rc_shift5 (BARX1_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0875.2_rc (BARX1_rc); m=27/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.493122; -----TAATkg
; cor=; Ncor=
a	0	0	0	0	0	0.0	6805.0	6805.0	0.0	87.0	1667.0
c	0	0	0	0	0	0.0	0.0	0.0	192.0	1386.0	246.0
g	0	0	0	0	0	0.0	0.0	0.0	207.0	1992.0	5138.0
t	0	0	0	0	0	6805.0	0.0	0.0	6805.0	3339.0	590.0
MA0618.2_rc_shift4 (LBX1_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0618.2_rc (LBX1_rc); m=28/99; ncol2=7; w=0; offset=4; strand=R; shift=4; score=0.493035; ----CYARTTA
; cor=; Ncor=
a	0	0	0	0	57.0	0.0	738.0	738.0	0.0	0.0	951.0
c	0	0	0	0	799.0	268.0	119.0	0.0	0.0	0.0	0.0
g	0	0	0	0	114.0	0.0	0.0	262.0	0.0	0.0	49.0
t	0	0	0	0	29.0	731.0	143.0	0.0	999.0	999.0	0.0
MA0068.2_shift4 (PAX4) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0068.2 (PAX4); m=29/99; ncol2=8; w=0; offset=4; strand=D; shift=4; score=0.491395; ----ctAATTA
; cor=; Ncor=
a	0	0	0	0	37.0	58.0	333.0	333.0	0.0	18.0	333.0
c	0	0	0	0	333.0	30.0	2.0	0.0	0.0	11.0	89.0
g	0	0	0	0	47.0	120.0	0.0	0.0	5.0	10.0	11.0
t	0	0	0	0	105.0	333.0	3.0	0.0	333.0	333.0	12.0
MA0644.3_shift4 (ESX1) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0644.3 (ESX1); m=30/99; ncol2=7; w=0; offset=4; strand=D; shift=4; score=0.490882; ----yyAATTA
; cor=; Ncor=
a	0	0	0	0	1070.0	589.0	19670.0	19670.0	0.0	47.0	19670.0
c	0	0	0	0	11980.0	7595.0	634.0	95.0	0.0	1009.0	0.0
g	0	0	0	0	2110.0	0.0	821.0	0.0	0.0	225.0	925.0
t	0	0	0	0	7690.0	12075.0	181.0	0.0	19670.0	19670.0	557.0
MA0707.3_rc_shift5 (MNX1_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0707.3_rc (MNX1_rc); m=31/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.490698; -----TAATyr
; cor=; Ncor=
a	0	0	0	0	0	0.0	19178.0	19178.0	0.0	0.0	11058.0
c	0	0	0	0	0	0.0	797.0	0.0	0.0	16561.0	0.0
g	0	0	0	0	0	0.0	2158.0	0.0	0.0	3243.0	8120.0
t	0	0	0	0	0	19178.0	0.0	0.0	19178.0	19178.0	0.0
MA0706.2_shift4 (MEOX2) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0706.2 (MEOX2); m=32/99; ncol2=7; w=0; offset=4; strand=D; shift=4; score=0.48928; ----sTaATtA
; cor=; Ncor=
a	0	0	0	0	3262.0	1469.0	23930.0	23930.0	76.0	1152.0	23930.0
c	0	0	0	0	8942.0	5055.0	8988.0	788.0	38.0	6039.0	359.0
g	0	0	0	0	14987.0	642.0	3016.0	272.0	169.0	4974.0	4099.0
t	0	0	0	0	2754.0	23930.0	900.0	492.0	23930.0	23930.0	1032.0
MA1481.2_rc_shift5 (DRGX_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1481.2_rc (DRGX_rc); m=33/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.489042; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	144.0	14867.0	14867.0	0.0	0.0	8870.0
c	0	0	0	0	0	962.0	209.0	0.0	0.0	2037.0	1111.0
g	0	0	0	0	0	17.0	813.0	0.0	0.0	501.0	5997.0
t	0	0	0	0	0	14867.0	0.0	0.0	14867.0	14867.0	1079.0
MA2093.1_shift4 (HOXB1) 
; oligos_6nt_test_vs_ctrl_m5 versus MA2093.1 (HOXB1); m=34/99; ncol2=7; w=0; offset=4; strand=D; shift=4; score=0.488794; ----sTAATTA
; cor=; Ncor=
a	0	0	0	0	71.0	0.0	2003.0	2003.0	0.0	0.0	2003.0
c	0	0	0	0	705.0	412.0	450.0	0.0	0.0	253.0	47.0
g	0	0	0	0	1298.0	0.0	307.0	0.0	1.0	262.0	633.0
t	0	0	0	0	0.0	2003.0	0.0	0.0	2003.0	2003.0	0.0
MA1507.2_rc_shift5 (HOXD4_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1507.2_rc (HOXD4_rc); m=35/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.488335; -----TAATkR
; cor=; Ncor=
a	0	0	0	0	0	0.0	3405.0	3405.0	0.0	0.0	3405.0
c	0	0	0	0	0	194.0	0.0	0.0	176.0	0.0	0.0
g	0	0	0	0	0	0.0	0.0	0.0	0.0	1862.0	1184.0
t	0	0	0	0	0	3405.0	0.0	0.0	3405.0	1542.0	0.0
MA0702.3_shift4 (LMX1A) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0702.3 (LMX1A); m=36/99; ncol2=7; w=0; offset=4; strand=D; shift=4; score=0.487054; ----yTAATTA
; cor=; Ncor=
a	0	0	0	0	90.0	0.0	7355.0	7355.0	0.0	0.0	7355.0
c	0	0	0	0	2222.0	31.0	0.0	9.0	50.0	0.0	102.0
g	0	0	0	0	305.0	19.0	0.0	0.0	0.0	0.0	501.0
t	0	0	0	0	5133.0	7355.0	0.0	0.0	7355.0	7355.0	0.0
MA0658.2_shift4 (LHX6) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0658.2 (LHX6); m=37/99; ncol2=8; w=0; offset=4; strand=D; shift=4; score=0.486285; ----cTAATTA
; cor=; Ncor=
a	0	0	0	0	529.0	0.0	4438.0	4438.0	0.0	0.0	4438.0
c	0	0	0	0	3015.0	253.0	90.0	14.0	98.0	766.0	0.0
g	0	0	0	0	791.0	28.0	487.0	0.0	15.0	108.0	243.0
t	0	0	0	0	1422.0	4438.0	0.0	0.0	4438.0	4438.0	2.0
MA0721.2_rc_shift5 (UNCX_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0721.2_rc (UNCX_rc); m=38/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.486171; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	3885.0	36926.0	36926.0	890.0	2629.0	20126.0
c	0	0	0	0	0	731.0	1782.0	117.0	420.0	4582.0	2086.0
g	0	0	0	0	0	2211.0	3958.0	806.0	1302.0	2540.0	16800.0
t	0	0	0	0	0	36926.0	3111.0	481.0	36926.0	36926.0	3975.0
MA1504.2_rc_shift5 (HOXC4_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1504.2_rc (HOXC4_rc); m=39/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.485987; -----TAATkR
; cor=; Ncor=
a	0	0	0	0	0	0.0	8759.0	8759.0	0.0	0.0	8759.0
c	0	0	0	0	0	825.0	0.0	0.0	583.0	0.0	0.0
g	0	0	0	0	0	0.0	0.0	0.0	0.0	5152.0	3111.0
t	0	0	0	0	0	8759.0	0.0	0.0	8759.0	3607.0	188.0
MA0634.2_rc_shift5 (ALX3_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0634.2_rc (ALX3_rc); m=40/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.485835; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	977.0	7877.0	7877.0	231.0	629.0	4510.0
c	0	0	0	0	0	87.0	239.0	8.0	141.0	885.0	345.0
g	0	0	0	0	0	449.0	729.0	72.0	317.0	506.0	3367.0
t	0	0	0	0	0	7877.0	697.0	76.0	7877.0	7877.0	794.0
MA1499.2_rc_shift5 (HOXB4_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1499.2_rc (HOXB4_rc); m=41/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.484967; -----TAATkA
; cor=; Ncor=
a	0	0	0	0	0	0.0	9080.0	9080.0	0.0	0.0	9080.0
c	0	0	0	0	0	55.0	271.0	0.0	265.0	0.0	0.0
g	0	0	0	0	0	0.0	0.0	0.0	0.0	5459.0	2103.0
t	0	0	0	0	0	9080.0	0.0	0.0	9080.0	3621.0	0.0
MA0902.3_rc_shift5 (HOXB2_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0902.3_rc (HOXB2_rc); m=42/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.484511; -----TAATkr
; cor=; Ncor=
a	0	0	0	0	0	0.0	6827.0	6827.0	0.0	0.0	3993.0
c	0	0	0	0	0	0.0	1876.0	0.0	0.0	199.0	0.0
g	0	0	0	0	0	0.0	0.0	0.0	0.0	3276.0	2834.0
t	0	0	0	0	0	6827.0	0.0	0.0	6827.0	6827.0	51.0
MA0882.2_rc_shift5 (DLX6_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0882.2_rc (DLX6_rc); m=43/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.484493; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	193.0	2623.0	2623.0	56.0	184.0	1212.0
c	0	0	0	0	0	16.0	68.0	0.0	0.0	143.0	21.0
g	0	0	0	0	0	30.0	140.0	0.0	124.0	273.0	1410.0
t	0	0	0	0	0	2623.0	48.0	12.0	2623.0	2623.0	137.0
MA0704.2_rc_shift5 (Lhx4_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0704.2_rc (Lhx4_rc); m=44/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.48434; -----TAATTA
; cor=; Ncor=
a	0	0	0	0	0	135.0	2896.0	2896.0	155.0	255.0	2896.0
c	0	0	0	0	0	316.0	57.0	0.0	0.0	309.0	0.0
g	0	0	0	0	0	39.0	446.0	0.0	0.0	428.0	912.0
t	0	0	0	0	0	2896.0	0.0	0.0	2896.0	2896.0	217.0
MA0880.2_rc_shift5 (Dlx3_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0880.2_rc (Dlx3_rc); m=45/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.483726; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	691.0	7323.0	7323.0	299.0	643.0	3190.0
c	0	0	0	0	0	101.0	452.0	60.0	62.0	587.0	164.0
g	0	0	0	0	0	202.0	535.0	66.0	536.0	995.0	4133.0
t	0	0	0	0	0	7323.0	399.0	173.0	7323.0	7323.0	572.0
MA0716.2_rc_shift5 (PRRX1_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0716.2_rc (PRRX1_rc); m=46/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.483634; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	1229.0	23897.0	23897.0	209.0	810.0	12775.0
c	0	0	0	0	0	136.0	1004.0	0.0	202.0	1776.0	1121.0
g	0	0	0	0	0	644.0	2302.0	3.0	503.0	1088.0	11122.0
t	0	0	0	0	0	23897.0	1264.0	0.0	23897.0	23897.0	2373.0
MA0885.3_rc_shift4 (Dlx2_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0885.3_rc (Dlx2_rc); m=47/99; ncol2=8; w=0; offset=4; strand=R; shift=4; score=0.483316; ----CTAATTG
; cor=; Ncor=
a	0	0	0	0	723.0	377.0	6948.0	7175.0	143.0	138.0	908.0
c	0	0	0	0	5246.0	114.0	103.0	61.0	114.0	47.0	159.0
g	0	0	0	0	537.0	22.0	316.0	45.0	135.0	164.0	6082.0
t	0	0	0	0	931.0	6924.0	70.0	156.0	7045.0	7088.0	288.0
MA0879.3_rc_shift5 (DLX1_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0879.3_rc (DLX1_rc); m=48/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.483167; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	614.0	6231.0	6231.0	0.0	540.0	2171.0
c	0	0	0	0	0	168.0	155.0	0.0	0.0	954.0	0.0
g	0	0	0	0	0	0.0	639.0	0.0	222.0	1212.0	4059.0
t	0	0	0	0	0	6231.0	0.0	0.0	6231.0	6231.0	265.0
MA0886.2_rc_shift5 (EMX2_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0886.2_rc (EMX2_rc); m=49/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.482654; -----TAATTA
; cor=; Ncor=
a	0	0	0	0	0	0.0	37262.0	37262.0	0.0	1236.0	29501.0
c	0	0	0	0	0	0.0	4025.0	0.0	0.0	678.0	0.0
g	0	0	0	0	0	0.0	0.0	0.0	0.0	4938.0	7761.0
t	0	0	0	0	0	37262.0	0.0	0.0	37262.0	37262.0	834.0
MA0717.2_rc_shift5 (RAX2_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0717.2_rc (RAX2_rc); m=50/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.482232; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	4258.0	38860.0	38860.0	1030.0	2421.0	19215.0
c	0	0	0	0	0	360.0	2513.0	125.0	757.0	4490.0	1688.0
g	0	0	0	0	0	2644.0	4232.0	738.0	1523.0	3060.0	19645.0
t	0	0	0	0	0	38860.0	2167.0	270.0	38860.0	38860.0	3558.0
MA1577.2_rc_shift5 (TLX2_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1577.2_rc (TLX2_rc); m=51/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.482175; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	0.0	7799.0	7799.0	0.0	0.0	8156.0
c	0	0	0	0	0	0.0	0.0	0.0	0.0	80.0	1112.0
g	0	0	0	0	0	0.0	0.0	0.0	0.0	0.0	7799.0
t	0	0	0	0	0	7799.0	0.0	0.0	7799.0	7799.0	1435.0
MA1519.2_shift4 (LHX5) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1519.2 (LHX5); m=52/99; ncol2=7; w=0; offset=4; strand=D; shift=4; score=0.482172; ----sYAATTA
; cor=; Ncor=
a	0	0	0	0	394.0	0.0	7142.0	7142.0	0.0	0.0	7142.0
c	0	0	0	0	3420.0	2093.0	187.0	0.0	0.0	144.0	0.0
g	0	0	0	0	3721.0	0.0	0.0	0.0	0.0	28.0	160.0
t	0	0	0	0	1215.0	5049.0	0.0	0.0	7142.0	7142.0	0.0
MA0674.2_rc_shift4 (NKX6-1_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0674.2_rc (NKX6-1_rc); m=53/99; ncol2=7; w=0; offset=4; strand=R; shift=4; score=0.481081; ----tTAATkR
; cor=; Ncor=
a	0	0	0	0	327.0	17.0	2212.0	2212.0	40.0	195.0	1640.0
c	0	0	0	0	142.0	132.0	0.0	0.0	12.0	0.0	0.0
g	0	0	0	0	294.0	27.0	45.0	0.0	200.0	805.0	573.0
t	0	0	0	0	1450.0	2212.0	58.0	0.0	2212.0	1407.0	0.0
MA0158.2_rc_shift4 (HOXA5_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0158.2_rc (HOXA5_rc); m=54/99; ncol2=8; w=0; offset=4; strand=R; shift=4; score=0.481051; ----sTAATkr
; cor=; Ncor=
a	0	0	0	0	54.0	0.0	3130.0	3130.0	0.0	0.0	2078.0
c	0	0	0	0	1133.0	0.0	885.0	0.0	0.0	81.0	0.0
g	0	0	0	0	1463.0	0.0	0.0	0.0	0.0	1632.0	1052.0
t	0	0	0	0	480.0	3130.0	0.0	0.0	3130.0	3130.0	0.0
MA0662.2_rc_shift5 (MIXL1_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0662.2_rc (MIXL1_rc); m=55/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.480842; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	2895.0	27042.0	27042.0	736.0	1038.0	15403.0
c	0	0	0	0	0	115.0	2031.0	181.0	556.0	3660.0	1245.0
g	0	0	0	0	0	1903.0	4270.0	510.0	662.0	1911.0	11639.0
t	0	0	0	0	0	27042.0	1385.0	0.0	27042.0	27042.0	2635.0
MA0881.2_rc_shift5 (Dlx4_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0881.2_rc (Dlx4_rc); m=56/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.480699; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	1127.0	12054.0	12054.0	499.0	883.0	5213.0
c	0	0	0	0	0	134.0	542.0	38.0	55.0	739.0	145.0
g	0	0	0	0	0	316.0	868.0	85.0	744.0	1500.0	6841.0
t	0	0	0	0	0	12054.0	440.0	88.0	12054.0	12054.0	724.0
MA0900.3_rc_shift5 (HOXA2_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0900.3_rc (HOXA2_rc); m=57/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.480521; -----TAATKA
; cor=; Ncor=
a	0	0	0	0	0	0.0	56949.0	56949.0	0.0	0.0	56949.0
c	0	0	0	0	0	2052.0	0.0	0.0	0.0	290.0	0.0
g	0	0	0	0	0	0.0	0.0	0.0	0.0	17275.0	3636.0
t	0	0	0	0	0	56949.0	0.0	0.0	56949.0	39674.0	0.0
MA1476.3_rc_shift4 (Dlx5_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1476.3_rc (Dlx5_rc); m=58/99; ncol2=8; w=0; offset=4; strand=R; shift=4; score=0.480174; ----cTAATTG
; cor=; Ncor=
a	0	0	0	0	561.0	198.0	3849.0	3960.0	58.0	64.0	494.0
c	0	0	0	0	2658.0	37.0	52.0	23.0	59.0	19.0	78.0
g	0	0	0	0	304.0	6.0	143.0	26.0	62.0	88.0	3363.0
t	0	0	0	0	554.0	3836.0	33.0	68.0	3898.0	3906.0	142.0
MA0720.2_rc_shift5 (Shox2_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0720.2_rc (Shox2_rc); m=59/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.47971; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	895.0	18179.0	18179.0	79.0	766.0	9152.0
c	0	0	0	0	0	36.0	870.0	0.0	3.0	426.0	228.0
g	0	0	0	0	0	193.0	545.0	12.0	138.0	626.0	9027.0
t	0	0	0	0	0	18179.0	597.0	29.0	18179.0	18179.0	979.0
MA0125.2_shift5 (Nobox) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0125.2 (Nobox); m=60/99; ncol2=6; w=0; offset=5; strand=D; shift=5; score=0.478525; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	0.0	36.0	38.0	1.0	2.0	15.0
c	0	0	0	0	0	1.0	0.0	0.0	1.0	0.0	0.0
g	0	0	0	0	0	0.0	0.0	0.0	2.0	4.0	22.0
t	0	0	0	0	0	37.0	2.0	0.0	34.0	32.0	1.0
MA0612.3_rc_shift5 (EMX1_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0612.3_rc (EMX1_rc); m=61/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.478063; -----TAATTA
; cor=; Ncor=
a	0	0	0	0	0	0.0	9544.0	9544.0	0.0	0.0	7281.0
c	0	0	0	0	0	0.0	933.0	0.0	0.0	0.0	0.0
g	0	0	0	0	0	0.0	0.0	0.0	0.0	1235.0	2263.0
t	0	0	0	0	0	9544.0	0.0	0.0	9544.0	9544.0	19.0
MA0654.2_rc_shift5 (ISX_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0654.2_rc (ISX_rc); m=62/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.474977; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	49.0	2065.0	2065.0	10.0	24.0	1061.0
c	0	0	0	0	0	0.0	24.0	0.0	0.0	5.0	0.0
g	0	0	0	0	0	0.0	0.0	0.0	16.0	48.0	1003.0
t	0	0	0	0	0	2065.0	0.0	0.0	2065.0	2065.0	10.0
MA0699.2_rc_shift5 (LBX2_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0699.2_rc (LBX2_rc); m=63/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.474954; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	148.0	2996.0	2996.0	89.0	57.0	1362.0
c	0	0	0	0	0	106.0	293.0	118.0	130.0	325.0	109.0
g	0	0	0	0	0	34.0	258.0	29.0	290.0	338.0	1634.0
t	0	0	0	0	0	2996.0	150.0	0.0	2996.0	2996.0	157.0
MA0890.2_rc_shift5 (GBX2_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0890.2_rc (GBX2_rc); m=64/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.474036; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	650.0	27366.0	27366.0	25.0	227.0	11855.0
c	0	0	0	0	0	30.0	673.0	65.0	114.0	1113.0	106.0
g	0	0	0	0	0	73.0	570.0	61.0	250.0	570.0	15511.0
t	0	0	0	0	0	27366.0	318.0	0.0	27366.0	27366.0	699.0
MA0718.2_rc_shift5 (RAX_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0718.2_rc (RAX_rc); m=65/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.472874; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	126.0	2412.0	2412.0	24.0	40.0	1131.0
c	0	0	0	0	0	20.0	49.0	0.0	12.0	3.0	25.0
g	0	0	0	0	0	0.0	71.0	0.0	38.0	17.0	1281.0
t	0	0	0	0	0	2412.0	71.0	123.0	2412.0	2412.0	214.0
MA0889.2_shift4 (GBX1) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0889.2 (GBX1); m=66/99; ncol2=7; w=0; offset=4; strand=D; shift=4; score=0.472111; ----syAATTA
; cor=; Ncor=
a	0	0	0	0	1674.0	243.0	27339.0	27339.0	45.0	312.0	27339.0
c	0	0	0	0	14978.0	13543.0	589.0	172.0	128.0	438.0	50.0
g	0	0	0	0	6964.0	15.0	758.0	29.0	1.0	246.0	8.0
t	0	0	0	0	3723.0	13796.0	157.0	23.0	27339.0	27339.0	321.0
MA0621.2_shift4 (mix-a) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0621.2 (mix-a); m=67/99; ncol2=7; w=0; offset=4; strand=D; shift=4; score=0.471047; ----tTAATTA
; cor=; Ncor=
a	0	0	0	0	130.0	0.0	1000.0	1000.0	0.0	0.0	938.0
c	0	0	0	0	146.0	0.0	0.0	0.0	0.0	0.0	21.0
g	0	0	0	0	46.0	0.0	0.0	0.0	0.0	0.0	21.0
t	0	0	0	0	679.0	1000.0	0.0	0.0	1000.0	1000.0	21.0
MA0894.2_shift5 (HESX1) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0894.2 (HESX1); m=68/99; ncol2=6; w=0; offset=5; strand=D; shift=5; score=0.470311; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	187.0	4072.0	4072.0	0.0	0.0	1892.0
c	0	0	0	0	0	0.0	0.0	7.0	0.0	15.0	38.0
g	0	0	0	0	0	34.0	53.0	9.0	15.0	0.0	2180.0
t	0	0	0	0	0	4072.0	31.0	0.0	4072.0	4072.0	97.0
MA0027.3_rc_shift5 (EN1_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0027.3_rc (EN1_rc); m=69/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.467972; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	132.0	2891.0	2891.0	0.0	0.0	1562.0
c	0	0	0	0	0	30.0	162.0	0.0	0.0	71.0	5.0
g	0	0	0	0	0	0.0	483.0	0.0	28.0	99.0	1328.0
t	0	0	0	0	0	2891.0	57.0	0.0	2891.0	2891.0	104.0
MA0709.2_rc_shift5 (Msx3_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0709.2_rc (Msx3_rc); m=70/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.466015; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	213.0	8380.0	8380.0	5.0	94.0	2582.0
c	0	0	0	0	0	88.0	105.0	0.0	38.0	237.0	29.0
g	0	0	0	0	0	59.0	215.0	0.0	89.0	160.0	5798.0
t	0	0	0	0	0	8380.0	121.0	0.0	8380.0	8380.0	312.0
MA0666.3_rc_shift5 (MSX1_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0666.3_rc (MSX1_rc); m=71/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.46593; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	0.0	5064.0	5064.0	0.0	0.0	2415.0
c	0	0	0	0	0	159.0	0.0	0.0	0.0	146.0	0.0
g	0	0	0	0	0	0.0	280.0	0.0	42.0	125.0	5064.0
t	0	0	0	0	0	5064.0	0.0	0.0	5064.0	5064.0	227.0
MA0648.2_shift5 (GSC) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0648.2 (GSC); m=72/99; ncol2=6; w=0; offset=5; strand=D; shift=5; score=0.463109; -----TAATCC
; cor=; Ncor=
a	0	0	0	0	0	0.0	6081.0	6081.0	0.0	416.0	315.0
c	0	0	0	0	0	54.0	71.0	0.0	25.0	6081.0	6081.0
g	0	0	0	0	0	0.0	176.0	0.0	144.0	452.0	828.0
t	0	0	0	0	0	6081.0	89.0	0.0	6081.0	787.0	1099.0
MA0891.2_shift5 (GSC2) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0891.2 (GSC2); m=73/99; ncol2=6; w=0; offset=5; strand=D; shift=5; score=0.462352; -----TAATCc
; cor=; Ncor=
a	0	0	0	0	0	116.0	2016.0	2016.0	0.0	255.0	182.0
c	0	0	0	0	0	0.0	87.0	11.0	41.0	2016.0	2016.0
g	0	0	0	0	0	0.0	56.0	0.0	145.0	179.0	422.0
t	0	0	0	0	0	2016.0	201.0	132.0	2016.0	204.0	439.0
MA0708.3_rc_shift5 (MSX2_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0708.3_rc (MSX2_rc); m=74/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.461827; -----TAATTR
; cor=; Ncor=
a	0	0	0	0	0	0.0	6353.0	6353.0	0.0	0.0	2737.0
c	0	0	0	0	0	243.0	0.0	0.0	0.0	259.0	0.0
g	0	0	0	0	0	0.0	600.0	0.0	112.0	175.0	6353.0
t	0	0	0	0	0	6353.0	62.0	0.0	6353.0	6353.0	220.0
MA1495.2_shift5 (HOXA1) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1495.2 (HOXA1); m=75/99; ncol2=6; w=0; offset=5; strand=D; shift=5; score=0.461812; -----TAATtA
; cor=; Ncor=
a	0	0	0	0	0	0.0	7406.0	7406.0	0.0	0.0	7406.0
c	0	0	0	0	0	1546.0	2083.0	0.0	0.0	1310.0	0.0
g	0	0	0	0	0	0.0	1244.0	0.0	0.0	2265.0	1576.0
t	0	0	0	0	0	7406.0	0.0	0.0	7406.0	7406.0	0.0
MA0904.3_shift5 (HOXB5) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0904.3 (HOXB5); m=76/99; ncol2=6; w=0; offset=5; strand=D; shift=5; score=0.461377; -----TMATKA
; cor=; Ncor=
a	0	0	0	0	0	0.0	3067.0	3067.0	0.0	6.0	3067.0
c	0	0	0	0	0	537.0	1031.0	0.0	0.0	26.0	0.0
g	0	0	0	0	0	0.0	0.0	0.0	0.0	1061.0	564.0
t	0	0	0	0	0	3067.0	0.0	0.0	3067.0	3067.0	0.0
MA0628.2_shift5 (POU6F1) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0628.2 (POU6F1); m=77/99; ncol2=6; w=0; offset=5; strand=D; shift=5; score=0.460855; -----TAATTA
; cor=; Ncor=
a	0	0	0	0	0	32.0	905.0	938.0	14.0	18.0	950.0
c	0	0	0	0	0	10.0	70.0	34.0	14.0	8.0	8.0
g	0	0	0	0	0	8.0	8.0	14.0	34.0	70.0	10.0
t	0	0	0	0	0	950.0	18.0	14.0	938.0	905.0	32.0
MA0854.2_shift4 (Alx1) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0854.2 (Alx1); m=78/99; ncol2=8; w=0; offset=4; strand=D; shift=4; score=0.460389; ----yTAATTA
; cor=; Ncor=
a	0	0	0	0	5.0	1.0	98.0	98.0	1.0	0.0	92.0
c	0	0	0	0	40.0	7.0	0.0	0.0	1.0	1.0	0.0
g	0	0	0	0	2.0	0.0	1.0	1.0	0.0	0.0	7.0
t	0	0	0	0	53.0	92.0	0.0	1.0	98.0	98.0	1.0
MA1505.2_rc_shift5 (HOXC8_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1505.2_rc (HOXC8_rc); m=79/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.455491; -----YAATTr
; cor=; Ncor=
a	0	0	0	0	0	0.0	9273.0	9273.0	0.0	983.0	9273.0
c	0	0	0	0	0	4325.0	2656.0	211.0	0.0	19.0	0.0
g	0	0	0	0	0	0.0	99.0	0.0	20.0	2727.0	4555.0
t	0	0	0	0	0	9273.0	961.0	0.0	9273.0	9273.0	0.0
MA0705.2_shift5 (Lhx8) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0705.2 (Lhx8); m=80/99; ncol2=6; w=0; offset=5; strand=D; shift=5; score=0.451761; -----YAATYR
; cor=; Ncor=
a	0	0	0	0	0	0.0	5092.0	5092.0	0.0	0.0	5092.0
c	0	0	0	0	0	1996.0	160.0	0.0	0.0	2083.0	0.0
g	0	0	0	0	0	0.0	1670.0	0.0	0.0	88.0	1929.0
t	0	0	0	0	0	5092.0	0.0	0.0	5092.0	5092.0	0.0
MA0893.3_rc_shift5 (GSX2_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0893.3_rc (GSX2_rc); m=81/99; ncol2=7; w=0; offset=5; strand=R; shift=5; score=0.450654; -----TAATkr
; cor=; Ncor=
a	0	0	0	0	0	20.0	4998.0	4998.0	0.0	29.0	4998.0
c	0	0	0	0	0	1005.0	77.0	0.0	708.0	95.0	400.0
g	0	0	0	0	0	0.0	0.0	121.0	0.0	2223.0	2611.0
t	0	0	0	0	0	4998.0	0.0	0.0	4998.0	2775.0	503.0
MA0724.1_rc_shift4 (VENTX_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0724.1_rc (VENTX_rc); m=82/99; ncol2=9; w=0; offset=4; strand=R; shift=4; score=0.45038; ----yTAATyG
; cor=; Ncor=
a	0	0	0	0	2189.0	0.0	23923.0	23923.0	74.0	626.0	3964.0
c	0	0	0	0	15103.0	0.0	0.0	0.0	0.0	16128.0	0.0
g	0	0	0	0	706.0	0.0	0.0	0.0	203.0	5650.0	23923.0
t	0	0	0	0	8820.0	23923.0	0.0	0.0	23923.0	7795.0	562.0
MA0700.3_rc_shift5 (LHX2_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0700.3_rc (LHX2_rc); m=83/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.447865; -----TAATTG
; cor=; Ncor=
a	0	0	0	0	0	39.0	6256.0	6082.0	133.0	420.0	640.0
c	0	0	0	0	0	6.0	5.0	64.0	77.0	52.0	37.0
g	0	0	0	0	0	13.0	5.0	58.0	101.0	71.0	5612.0
t	0	0	0	0	0	6275.0	67.0	129.0	6022.0	5790.0	44.0
MA1502.2_rc_shift5 (HOXB8_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1502.2_rc (HOXB8_rc); m=84/99; ncol2=7; w=0; offset=5; strand=R; shift=5; score=0.445032; -----TAATkr
; cor=; Ncor=
a	0	0	0	0	0	0.0	4474.0	4474.0	0.0	0.0	1914.0
c	0	0	0	0	0	0.0	542.0	0.0	0.0	89.0	0.0
g	0	0	0	0	0	0.0	0.0	0.0	0.0	3374.0	2560.0
t	0	0	0	0	0	4474.0	284.0	0.0	4474.0	4474.0	0.0
MA1497.2_rc_shift5 (HOXA6_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1497.2_rc (HOXA6_rc); m=85/99; ncol2=7; w=0; offset=5; strand=R; shift=5; score=0.444171; -----TAATkr
; cor=; Ncor=
a	0	0	0	0	0	663.0	7201.0	7201.0	11.0	1482.0	4234.0
c	0	0	0	0	0	502.0	553.0	0.0	908.0	833.0	100.0
g	0	0	0	0	0	94.0	233.0	0.0	745.0	3768.0	2967.0
t	0	0	0	0	0	7201.0	1911.0	0.0	7201.0	7201.0	87.0
MA1500.2_shift5 (HOXB6) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1500.2 (HOXB6); m=86/99; ncol2=7; w=0; offset=5; strand=D; shift=5; score=0.44416; -----TAATkr
; cor=; Ncor=
a	0	0	0	0	0	0.0	6192.0	6192.0	0.0	403.0	3128.0
c	0	0	0	0	0	710.0	647.0	0.0	436.0	926.0	0.0
g	0	0	0	0	0	0.0	0.0	0.0	727.0	4139.0	3064.0
t	0	0	0	0	0	6192.0	564.0	0.0	6192.0	6192.0	0.0
MA0910.3_rc_shift5 (HOXD8_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0910.3_rc (HOXD8_rc); m=87/99; ncol2=7; w=0; offset=5; strand=R; shift=5; score=0.443298; -----TAATkr
; cor=; Ncor=
a	0	0	0	0	0	0.0	3629.0	3629.0	0.0	0.0	1480.0
c	0	0	0	0	0	0.0	507.0	0.0	0.0	47.0	0.0
g	0	0	0	0	0	0.0	0.0	0.0	0.0	3006.0	2150.0
t	0	0	0	0	0	3629.0	178.0	0.0	3629.0	3629.0	0.0
MA0711.2_shift5 (OTX1) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0711.2 (OTX1); m=88/99; ncol2=6; w=0; offset=5; strand=D; shift=5; score=0.439117; -----TAATCc
; cor=; Ncor=
a	0	0	0	0	0	745.0	23441.0	23441.0	243.0	647.0	789.0
c	0	0	0	0	0	90.0	0.0	0.0	0.0	23441.0	23441.0
g	0	0	0	0	0	0.0	254.0	0.0	3160.0	659.0	8662.0
t	0	0	0	0	0	23441.0	544.0	0.0	23441.0	378.0	3363.0
MA1501.2_rc_shift5 (HOXB7_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1501.2_rc (HOXB7_rc); m=89/99; ncol2=7; w=0; offset=5; strand=R; shift=5; score=0.438885; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	0.0	828.0	828.0	0.0	0.0	828.0
c	0	0	0	0	0	151.0	0.0	31.0	0.0	0.0	51.0
g	0	0	0	0	0	0.0	3.0	0.0	29.0	222.0	359.0
t	0	0	0	0	0	828.0	79.0	0.0	828.0	828.0	0.0
MA0642.3_rc_shift5 (EN2_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0642.3_rc (EN2_rc); m=90/99; ncol2=7; w=0; offset=5; strand=R; shift=5; score=0.438539; -----TAATTr
; cor=; Ncor=
a	0	0	0	0	0	0.0	898.0	898.0	0.0	103.0	321.0
c	0	0	0	0	0	168.0	0.0	0.0	31.0	44.0	0.0
g	0	0	0	0	0	4.0	0.0	0.0	0.0	198.0	577.0
t	0	0	0	0	0	898.0	28.0	0.0	898.0	898.0	0.0
MA1496.2_rc_shift5 (HOXA4_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1496.2_rc (HOXA4_rc); m=91/99; ncol2=7; w=0; offset=5; strand=R; shift=5; score=0.428408; -----TAATkR
; cor=; Ncor=
a	0	0	0	0	0	0.0	2454.0	2454.0	0.0	0.0	2454.0
c	0	0	0	0	0	260.0	171.0	39.0	684.0	176.0	0.0
g	0	0	0	0	0	146.0	173.0	0.0	0.0	1561.0	967.0
t	0	0	0	0	0	2454.0	0.0	0.0	2454.0	893.0	0.0
MA0714.2_shift5 (PITX3) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0714.2 (PITX3); m=92/99; ncol2=6; w=0; offset=5; strand=D; shift=5; score=0.426942; -----TAATCC
; cor=; Ncor=
a	0	0	0	0	0	493.0	6253.0	6253.0	262.0	318.0	227.0
c	0	0	0	0	0	51.0	32.0	0.0	138.0	6253.0	6253.0
g	0	0	0	0	0	9.0	260.0	15.0	1101.0	166.0	239.0
t	0	0	0	0	0	6253.0	158.0	0.0	6253.0	236.0	968.0
MA2334.1_shift2 (ZNF547) 
; oligos_6nt_test_vs_ctrl_m5 versus MA2334.1 (ZNF547); m=93/99; ncol2=13; w=0; offset=2; strand=D; shift=2; score=0.425976; --TGCTAATGC
; cor=; Ncor=
a	0	0	42.0	16.0	3.0	38.0	402.0	423.0	27.0	2.0	3.0
c	0	0	15.0	12.0	420.0	12.0	13.0	2.0	11.0	8.0	429.0
g	0	0	42.0	394.0	3.0	4.0	12.0	10.0	2.0	393.0	3.0
t	0	0	338.0	15.0	11.0	383.0	10.0	2.0	397.0	34.0	2.0
MA0703.3_rc_shift4 (LMX1B_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0703.3_rc (LMX1B_rc); m=94/99; ncol2=8; w=0; offset=4; strand=R; shift=4; score=0.42445; ----tTAATTA
; cor=; Ncor=
a	0	0	0	0	609.0	0.0	4064.0	4064.0	0.0	0.0	4064.0
c	0	0	0	0	350.0	0.0	0.0	0.0	0.0	0.0	0.0
g	0	0	0	0	785.0	12.0	0.0	0.0	0.0	0.0	0.0
t	0	0	0	0	2319.0	4064.0	0.0	0.0	4064.0	4064.0	0.0
MA0682.3_shift5 (PITX1) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0682.3 (PITX1); m=95/99; ncol2=6; w=0; offset=5; strand=D; shift=5; score=0.420418; -----TAATCC
; cor=; Ncor=
a	0	0	0	0	0	0.0	10531.0	10531.0	0.0	143.0	68.0
c	0	0	0	0	0	0.0	0.0	0.0	0.0	10531.0	10531.0
g	0	0	0	0	0	0.0	0.0	0.0	1039.0	0.0	134.0
t	0	0	0	0	0	10531.0	0.0	0.0	10531.0	141.0	547.0
MA0467.3_rc_shift5 (Crx_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA0467.3_rc (Crx_rc); m=96/99; ncol2=6; w=0; offset=5; strand=R; shift=5; score=0.419389; -----TAATCC
; cor=; Ncor=
a	0	0	0	0	0	44.0	4238.0	4281.0	47.0	71.0	30.0
c	0	0	0	0	0	23.0	20.0	9.0	42.0	4200.0	4129.0
g	0	0	0	0	0	25.0	25.0	32.0	17.0	36.0	155.0
t	0	0	0	0	0	4241.0	50.0	11.0	4227.0	26.0	19.0
MA1549.2_shift5 (POU6F1) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1549.2 (POU6F1); m=97/99; ncol2=7; w=0; offset=5; strand=D; shift=5; score=0.415497; -----TAATGA
; cor=; Ncor=
a	0	0	0	0	0	164.0	6413.0	6413.0	0.0	67.0	6413.0
c	0	0	0	0	0	273.0	179.0	0.0	0.0	206.0	96.0
g	0	0	0	0	0	10.0	255.0	0.0	298.0	5799.0	0.0
t	0	0	0	0	0	6413.0	0.0	0.0	6413.0	615.0	411.0
MA1530.2_rc_shift4 (NKX6-3_rc) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1530.2_rc (NKX6-3_rc); m=98/99; ncol2=8; w=0; offset=4; strand=R; shift=4; score=0.415442; ----wTAATGr
; cor=; Ncor=
a	0	0	0	0	3753.0	0.0	6906.0	6906.0	0.0	626.0	6906.0
c	0	0	0	0	379.0	701.0	0.0	0.0	0.0	533.0	0.0
g	0	0	0	0	789.0	0.0	467.0	0.0	0.0	6753.0	4562.0
t	0	0	0	0	6906.0	6906.0	0.0	0.0	6906.0	153.0	0.0
MA1547.2_shift4 (PITX2) 
; oligos_6nt_test_vs_ctrl_m5 versus MA1547.2 (PITX2); m=99/99; ncol2=8; w=0; offset=4; strand=D; shift=4; score=0.412603; ----yTAATCC
; cor=; Ncor=
a	0	0	0	0	924.0	0.0	8019.0	8019.0	0.0	0.0	0.0
c	0	0	0	0	2782.0	51.0	0.0	0.0	0.0	8019.0	8019.0
g	0	0	0	0	454.0	0.0	0.0	0.0	668.0	0.0	0.0
t	0	0	0	0	3859.0	8019.0	0.0	0.0	8019.0	0.0	189.0