One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/oligos_6nt_mkv4_m1/peak-motifs_oligos_6nt_mkv4_m1.tf -format2 tf -file2 $RSAT/public_html/motif_databases/cisBP2/cisBP_Homo_sapiens_2019.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/oligos_6nt_mkv4_m1/peak-motifs_oligos_6nt_mkv4_m1_vs_db_cisBP_Homo_sapiens

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv4_m1_shift7 ; 24 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv4_m1_shift7 (oligos_6nt_mkv4_m1)
; oligos_6nt_mkv4_m1; m=0 (reference); ncol1=11; shift=7; ncol=18; -------ssGCGGAGCss ; Alignment reference a 0 0 0 0 0 0 0 2477 1752 736 77 179 169 11341 264 412 1936 2079 c 0 0 0 0 0 0 0 5049 6877 2288 14466 487 1016 2434 575 13567 5116 4692 g 0 0 0 0 0 0 0 5416 4352 10937 72 14039 13418 580 13692 492 5302 5971 t 0 0 0 0 0 0 0 1905 1866 886 232 142 244 492 316 376 2493 2105

M07717_2.00_rc_shift5 (ZNF441_rc)
; oligos_6nt_mkv4_m1 versus M07717_2.00_rc (ZNF441_rc); m=1/23; ncol2=12; w=-2; offset=-2; strand=R; shift=5; score=0.666934; -----gGrGgCGGAGyy- ; cor=; Ncor= a 0 0 0 0 0 14.0766 9.57207 36.5991 11.3739 23.0856 0.112613 0.112613 0.112613 78.491 0.112613 0.112613 6.41892 0 c 0 0 0 0 0 22.1847 20.3829 6.41892 7.77027 10.9234 99.6622 0.112613 0.112613 0.112613 0.112613 51.0135 48.3108 0 g 0 0 0 0 0 47.8604 69.9324 56.4189 80.7432 65.4279 0.112613 99.6622 99.6622 21.2838 99.6622 1.46396 18.5811 0 t 0 0 0 0 0 15.8784 0.112613 0.563063 0.112613 0.563063 0.112613 0.112613 0.112613 0.112613 0.112613 47.4099 26.6892 0

M07585_2.00_shift7 (ZNF331)
; oligos_6nt_mkv4_m1 versus M07585_2.00 (ZNF331); m=2/23; ncol2=12; w=0; offset=0; strand=D; shift=7; score=0.643739; -------yTGCwGAGCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 3.09406 19.9257 2.59901 0.123762 52.599 1.11386 95.6683 6.55941 1.60891 21.4109 9.03465 c 0 0 0 0 0 0 0 63.9851 4.08416 2.10396 99.6287 0.618812 0.123762 0.123762 0.123762 98.1436 69.9257 79.8267 g 0 0 0 0 0 0 0 3.58911 6.55941 95.1733 0.123762 1.60891 98.6386 3.58911 92.698 0.123762 0.123762 0.618812 t 0 0 0 0 0 0 0 29.3317 69.4307 0.123762 0.123762 45.1733 0.123762 0.618812 0.618812 0.123762 8.5396 10.5198

M11037_2.00_shift6 (M11037_2.00)
; oligos_6nt_mkv4_m1 versus M11037_2.00; m=3/23; ncol2=11; w=-1; offset=-1; strand=D; shift=6; score=0.599595; ------csCGCTGAGsy- ; cor=; Ncor= a 0 0 0 0 0 0 14 16 0 0 4.0404 4.0404 8.08081 96 4 2 15.1515 0 c 0 0 0 0 0 0 45 27 91.9192 5 93.9394 2.0202 0 0 4 55 32.3232 0 g 0 0 0 0 0 0 23 55 4.0404 93 0 2.0202 85.8586 2 92 26 24.2424 0 t 0 0 0 0 0 0 18 2 4.0404 2 2.0202 91.9192 6.06061 2 0 17 28.2828 0

M02698_2.00_shift6 (M02698_2.00)
; oligos_6nt_mkv4_m1 versus M02698_2.00; m=4/23; ncol2=11; w=-1; offset=-1; strand=D; shift=6; score=0.599595; ------csCGCTGAGsy- ; cor=; Ncor= a 0 0 0 0 0 0 14 16 0 0 4.0404 4.0404 8.08081 96 4 2 15.1515 0 c 0 0 0 0 0 0 45 27 91.9192 5 93.9394 2.0202 0 0 4 55 32.3232 0 g 0 0 0 0 0 0 23 55 4.0404 93 0 2.0202 85.8586 2 92 26 24.2424 0 t 0 0 0 0 0 0 18 2 4.0404 2 2.0202 91.9192 6.06061 2 0 17 28.2828 0

M08298_2.00_rc_shift6 (KLF7_rc)
; oligos_6nt_mkv4_m1 versus M08298_2.00_rc (KLF7_rc); m=5/23; ncol2=11; w=-1; offset=-1; strand=R; shift=6; score=0.590347; ------kGGGCGkgGcc- ; cor=; Ncor= a 0 0 0 0 0 0 24.055 0 0 0 0 0 0 18.5567 2.0619 9.9656 12.0275 0 c 0 0 0 0 0 0 9.622 0 0 0 80.756 0 0 0 0 57.0447 46.7354 0 g 0 0 0 0 0 0 37.1134 100 100 100 0 100 67.6976 61.512 88.6598 17.5258 20.2749 0 t 0 0 0 0 0 0 29.2096 0 0 0 19.244 0 32.3024 19.9313 9.2784 15.4639 20.9622 0

M08296_2.00_rc_shift4 (SP4_rc)
; oligos_6nt_mkv4_m1 versus M08296_2.00_rc (SP4_rc); m=6/23; ncol2=15; w=-3; offset=-3; strand=R; shift=4; score=0.557199; ----rgGRGGcGGrGCcd ; cor=; Ncor= a 0 0 0 0 32.996 19.0283 7.8947 30.3644 0.2024 0 19.8381 0 1.8219 35.0202 15.1822 7.4899 8.2996 25.9109 c 0 0 0 0 5.8704 4.8583 0 1.0121 0 0 67.6113 1.417 2.6316 3.4413 7.085 69.8381 48.583 14.9798 g 0 0 0 0 45.3441 63.9676 70.2429 68.6235 99.7976 99.7976 0 98.583 83.4008 56.2753 75.9109 11.1336 18.8259 26.5182 t 0 0 0 0 15.7895 12.1457 21.8623 0 0 0.2024 12.5506 0 12.1457 5.2632 1.8219 11.5385 24.2915 32.5911

M08323_2.00_rc_shift6 (KLF15_rc)
; oligos_6nt_mkv4_m1 versus M08323_2.00_rc (KLF15_rc); m=7/23; ncol2=15; w=-1; offset=-1; strand=R; shift=6; score=0.546444; ------GRGGcGGrGccg ; cor=; Ncor= a 0 0 0 0 0 0 17.0683 28.3133 0 0.6024 22.2892 0 0 41.7671 12.0482 19.2771 24.498 15.0602 c 0 0 0 0 0 0 3.2129 0.8032 0 0.2008 58.8353 0 3.012 1.2048 0 46.1847 36.1446 8.8353 g 0 0 0 0 0 0 69.0763 70.8835 100 99.1968 0 100 88.755 47.5904 85.3414 24.8996 23.0924 62.4498 t 0 0 0 0 0 0 10.6426 0 0 0 18.8755 0 8.2329 9.4378 2.6104 9.6386 16.2651 13.6546

M06160_2.00_rc_shift4 (M06160_2.00_rc)
; oligos_6nt_mkv4_m1 versus M06160_2.00_rc; m=8/23; ncol2=15; w=-3; offset=-3; strand=R; shift=4; score=0.516183; ----rgkGGGCGkGGCyw ; cor=; Ncor= a 0 0 0 0 36.7909 22.3473 13.3545 16.8521 0 0 5.88235 0.158983 0 21.7806 6.83625 7.47218 18.442 43.04 c 0 0 0 0 13.128 7.55627 1.43084 0 0 0 90.461 0 0 1.27186 5.40541 74.2448 42.4483 14.4 g 0 0 0 0 27.2285 62.701 42.1304 81.876 99.3641 99.2051 0 99.2051 60.5723 72.496 81.2401 0.953895 11.2878 8.96 t 0 0 0 0 22.8525 7.3955 43.0843 1.27186 0.63593 0.794913 3.6566 0.63593 39.4277 4.45151 6.51828 17.3291 27.8219 33.6

M08879_2.00_rc_shift5 (KLF12_rc)
; oligos_6nt_mkv4_m1 versus M08879_2.00_rc (KLF12_rc); m=9/23; ncol2=11; w=-2; offset=-2; strand=R; shift=5; score=0.508145; -----mgGGGCGGGGC-- ; cor=; Ncor= a 0 0 0 0 0 37.8319 24.7788 6.41593 0 0 9.0708 2.21239 0.442478 9.73451 1.32743 13.0531 0 0 c 0 0 0 0 0 34.292 3.09735 0 0.221239 0 87.8319 0.221239 0.884956 0 0.663717 80.0885 0 0 g 0 0 0 0 0 19.469 58.1858 93.1416 99.5575 100 0.221239 96.0177 79.2035 86.2832 96.4602 2.87611 0 0 t 0 0 0 0 0 8.40708 13.9381 0.442478 0.221239 0 2.87611 1.54867 19.469 3.9823 1.54867 3.9823 0 0

M10300_2.00_rc_shift4 (SP1_rc)
; oligos_6nt_mkv4_m1 versus M10300_2.00_rc (SP1_rc); m=10/23; ncol2=13; w=-3; offset=-3; strand=R; shift=4; score=0.503018; ----rggGGGCGGGgyb- ; cor=; Ncor= a 0 0 0 0 29.6296 22.2222 12.963 15.7407 0 0 17.5926 1.85185 0 19.4444 15.7407 2.77778 8.33333 0 c 0 0 0 0 19.4444 18.5185 9.25926 0.925926 0 1.85185 74.0741 4.62963 0.925926 4.62963 9.25926 50.9259 37.037 0 g 0 0 0 0 32.4074 51.8519 60.1852 82.4074 100 98.1481 0 91.6667 91.6667 70.3704 66.6667 19.4444 29.6296 0 t 0 0 0 0 18.5185 7.40741 17.5926 0.925926 0 0 8.33333 1.85185 7.40741 5.55556 8.33333 26.8519 25 0

M07616_2.00_rc_shift11 (ZNF610_rc)
; oligos_6nt_mkv4_m1 versus M07616_2.00_rc (ZNF610_rc); m=11/23; ncol2=9; w=0; offset=4; strand=R; shift=11; score=0.492568; -----------GGAGCGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0.0814332 0.0814332 99.7557 0.0814332 0.0814332 0.0814332 0.0814332 c 0 0 0 0 0 0 0 0 0 0 0 0.0814332 0.0814332 0.0814332 0.0814332 99.7557 0.0814332 14.4137 g 0 0 0 0 0 0 0 0 0 0 0 99.7557 99.7557 0.0814332 99.7557 0.0814332 99.7557 79.886 t 0 0 0 0 0 0 0 0 0 0 0 0.0814332 0.0814332 0.0814332 0.0814332 0.0814332 0.0814332 5.61889

M01913_2.00_shift5 (DNMT1)
; oligos_6nt_mkv4_m1 versus M01913_2.00 (DNMT1); m=12/23; ncol2=10; w=-2; offset=-2; strand=D; shift=5; score=0.492547; -----ssymgCGGsr--- ; cor=; Ncor= a 0 0 0 0 0 23.4138 22.394 17.2639 27.4855 19.1374 0.00313502 0.0301987 4.00612 21.9725 30.6596 0 0 0 c 0 0 0 0 0 28.0314 26.8105 34.4193 27.4855 16.4717 99.971 20.9062 13.9827 26.5703 20.1448 0 0 0 g 0 0 0 0 0 29.7648 30.5326 23.072 24.8699 43.4514 0.0197398 79.0471 77.3099 27.6546 30.9678 0 0 0 t 0 0 0 0 0 18.79 20.2629 25.2448 20.1591 20.9396 0 0.0165734 4.70122 23.8026 18.2278 0 0 0

M08326_2.00_rc_shift6 (SP2_rc)
; oligos_6nt_mkv4_m1 versus M08326_2.00_rc (SP2_rc); m=13/23; ncol2=9; w=-1; offset=-1; strand=R; shift=6; score=0.479975; ------gGGGCGGGg--- ; cor=; Ncor= a 0 0 0 0 0 0 11.4548 0.083612 0.083612 0.083612 0.083612 0.083612 0.083612 18.8127 21.4883 0 0 0 c 0 0 0 0 0 0 1.08696 0.083612 0.083612 0.083612 93.3946 0.083612 0.083612 0.083612 14.7993 0 0 0 g 0 0 0 0 0 0 64.9666 99.7492 99.7492 99.7492 0.083612 99.7492 97.408 74.3311 63.6288 0 0 0 t 0 0 0 0 0 0 22.4916 0.083612 0.083612 0.083612 6.43813 0.083612 2.42475 6.77258 0.083612 0 0 0

M08327_2.00_rc_shift11 (ZNF610_rc)
; oligos_6nt_mkv4_m1 versus M08327_2.00_rc (ZNF610_rc); m=14/23; ncol2=9; w=0; offset=4; strand=R; shift=11; score=0.475146; -----------GGAGCGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 11.3271 0.0670241 99.7989 0.0670241 0.0670241 0.0670241 0.0670241 c 0 0 0 0 0 0 0 0 0 0 0 5.42895 0.0670241 0.0670241 0.0670241 99.7989 0.0670241 4.89276 g 0 0 0 0 0 0 0 0 0 0 0 75.4021 99.7989 0.0670241 99.7989 0.0670241 99.7989 86.9303 t 0 0 0 0 0 0 0 0 0 0 0 7.84182 0.0670241 0.0670241 0.0670241 0.0670241 0.0670241 8.10992

M09259_2.00_shift8 (M09259_2.00)
; oligos_6nt_mkv4_m1 versus M09259_2.00; m=15/23; ncol2=7; w=0; offset=1; strand=D; shift=8; score=0.469995; --------sCCGGrr--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2.50053 0 0 0 0 57.5069 44.1707 0 0 0 c 0 0 0 0 0 0 0 0 59.1686 100 100 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 35.8303 0 0 100 100 42.4931 55.8293 0 0 0 t 0 0 0 0 0 0 0 0 2.50053 0 0 0 0 0 0 0 0 0

M09257_2.00_shift8 (MECP2)
; oligos_6nt_mkv4_m1 versus M09257_2.00 (MECP2); m=16/23; ncol2=7; w=0; offset=1; strand=D; shift=8; score=0.469995; --------sCCGGrr--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2.50053 0 0 0 0 57.5069 44.1707 0 0 0 c 0 0 0 0 0 0 0 0 59.1686 100 100 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 35.8303 0 0 100 100 42.4931 55.8293 0 0 0 t 0 0 0 0 0 0 0 0 2.50053 0 0 0 0 0 0 0 0 0

M00339_2.00_shift3 (PAX6)
; oligos_6nt_mkv4_m1 versus M00339_2.00 (PAX6); m=17/23; ncol2=13; w=-4; offset=-4; strand=D; shift=3; score=0.450314; ---grsacGgcGGwkc-- ; cor=; Ncor= a 0 0 0 22.6447 29.7397 17.8071 47.9093 5.06887 9.3262 9.19812 19.9138 2.37697 4.7031 48.1988 17.6587 19.9528 0 0 c 0 0 0 22.6447 20.3186 37.2742 17.409 65.1331 10.7374 9.44277 49.6149 11.617 4.7031 16.391 17.6587 40.1415 0 0 g 0 0 0 32.0658 29.6231 27.1116 16.603 15.3081 69.8687 60.5757 21.0027 83.6291 85.8907 7.2146 37.8474 19.9528 0 0 t 0 0 0 22.6447 20.3186 17.8071 18.0787 14.4899 10.0677 20.7834 9.4686 2.37697 4.7031 28.1956 26.8352 19.9528 0 0

M00224_2.00_rc_shift6 (KLF1_rc)
; oligos_6nt_mkv4_m1 versus M00224_2.00_rc (KLF1_rc); m=18/23; ncol2=8; w=-1; offset=-1; strand=R; shift=6; score=0.438301; ------dGGGCGkr---- ; cor=; Ncor= a 0 0 0 0 0 0 28.5511 0.110619 0.110619 0.110619 0.110619 0.110619 0.110619 49.8756 0 0 0 0 c 0 0 0 0 0 0 0.142045 0.110619 0.110619 0.110619 99.6681 0.110619 0.110619 0.124378 0 0 0 0 g 0 0 0 0 0 0 42.7557 99.6681 99.6681 99.6681 0.110619 99.6681 66.4823 49.8756 0 0 0 0 t 0 0 0 0 0 0 28.5511 0.110619 0.110619 0.110619 0.110619 0.110619 33.2965 0.124378 0 0 0 0

M01919_2.00_shift6 (M01919_2.00)
; oligos_6nt_mkv4_m1 versus M01919_2.00; m=19/23; ncol2=7; w=-1; offset=-1; strand=D; shift=6; score=0.426674; ------tyasCGg----- ; cor=; Ncor= a 0 0 0 0 0 0 24.0571 23.1338 33.9485 12.3203 0.0637745 2.27505 16.5154 0 0 0 0 0 c 0 0 0 0 0 0 24.7897 26.3454 22.7563 31.5398 98.2581 0.00291467 13.254 0 0 0 0 0 g 0 0 0 0 0 0 24.2988 20.5178 21.4311 37.76 0.000141614 97.7099 45.3448 0 0 0 0 0 t 0 0 0 0 0 0 26.8544 30.0029 21.8641 18.3798 1.67799 0.0121795 24.8858 0 0 0 0 0

M08975_2.00_rc_shift0 (M08975_2.00_rc)
; oligos_6nt_mkv4_m1 versus M08975_2.00_rc; m=20/23; ncol2=20; w=-7; offset=-7; strand=R; shift=0; score=0.420824; grgmargrGGCGGrGccr ; cor=; Ncor= a 22.2445 26.6533 14.0281 40.481 52.7054 34.6693 23.0461 34.2685 6.81363 3.60721 12.4248 5.61122 5.41082 35.2705 21.4429 19.8397 24.8497 32.6653 c 24.8497 14.8297 18.0361 25.0501 11.2224 2.60521 1.80361 2.00401 1.2024 0.400802 76.9539 1.60321 1.80361 3.00601 1.002 59.7194 41.483 7.81563 g 45.491 46.2926 60.521 24.8497 22.4449 54.9098 63.7275 61.523 90.1804 93.5872 1.002 85.5711 86.1723 56.7134 74.7495 14.2285 12.4248 36.4729 t 7.41483 12.2244 7.41483 9.61924 13.6273 7.81563 11.4228 2.20441 1.80361 2.40481 9.61924 7.21443 6.61323 5.01002 2.80561 6.21242 21.2425 23.0461

M08873_2.00_rc_shift0 (SP4_rc)
; oligos_6nt_mkv4_m1 versus M08873_2.00_rc (SP4_rc); m=21/23; ncol2=20; w=-7; offset=-7; strand=R; shift=0; score=0.420824; grgmargrGGCGGrGccr ; cor=; Ncor= a 22.2445 26.6533 14.0281 40.481 52.7054 34.6693 23.0461 34.2685 6.81363 3.60721 12.4248 5.61122 5.41082 35.2705 21.4429 19.8397 24.8497 32.6653 c 24.8497 14.8297 18.0361 25.0501 11.2224 2.60521 1.80361 2.00401 1.2024 0.400802 76.9539 1.60321 1.80361 3.00601 1.002 59.7194 41.483 7.81563 g 45.491 46.2926 60.521 24.8497 22.4449 54.9098 63.7275 61.523 90.1804 93.5872 1.002 85.5711 86.1723 56.7134 74.7495 14.2285 12.4248 36.4729 t 7.41483 12.2244 7.41483 9.61924 13.6273 7.81563 11.4228 2.20441 1.80361 2.40481 9.61924 7.21443 6.61323 5.01002 2.80561 6.21242 21.2425 23.0461

M08954_2.00_rc_shift11 (ZBTB14_rc)
; oligos_6nt_mkv4_m1 versus M08954_2.00_rc (ZBTB14_rc); m=22/23; ncol2=9; w=0; offset=4; strand=R; shift=11; score=0.41039; -----------gGwGCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 17.6715 9.35551 67.5676 2.4948 1.0395 1.2474 7.69231 c 0 0 0 0 0 0 0 0 0 0 0 19.5426 9.77131 0 1.0395 96.8815 0.4158 91.8919 g 0 0 0 0 0 0 0 0 0 0 0 48.8565 77.9626 0.2079 95.0104 1.4553 97.2973 0.2079 t 0 0 0 0 0 0 0 0 0 0 0 13.9293 2.9106 32.2245 1.4553 0.623701 1.0395 0.2079

M02541_2.00_shift6 (M02541_2.00)
; oligos_6nt_mkv4_m1 versus M02541_2.00; m=23/23; ncol2=8; w=-1; offset=-1; strand=D; shift=6; score=0.409065; ------CCCGCGGG---- ; cor=; Ncor= a 0 0 0 0 0 0 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0 0 0 0 c 0 0 0 0 0 0 97.1154 97.1154 97.1154 0.961538 97.1154 0.961538 0.961538 0.961538 0 0 0 0 g 0 0 0 0 0 0 0.961538 0.961538 0.961538 97.1154 0.961538 97.1154 97.1154 97.1154 0 0 0 0 t 0 0 0 0 0 0 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv4_m1_shift7 (oligos_6nt_mkv4_m1)				; oligos_6nt_mkv4_m1; m=0 (reference); ncol1=11; shift=7; ncol=18; -------ssGCGGAGCss ; Alignment reference a 0 0 0 0 0 0 0 2477 1752 736 77 179 169 11341 264 412 1936 2079 c 0 0 0 0 0 0 0 5049 6877 2288 14466 487 1016 2434 575 13567 5116 4692 g 0 0 0 0 0 0 0 5416 4352 10937 72 14039 13418 580 13692 492 5302 5971 t 0 0 0 0 0 0 0 1905 1866 886 232 142 244 492 316 376 2493 2105
M07717_2.00_rc_shift5 (ZNF441_rc)				; oligos_6nt_mkv4_m1 versus M07717_2.00_rc (ZNF441_rc); m=1/23; ncol2=12; w=-2; offset=-2; strand=R; shift=5; score=0.666934; -----gGrGgCGGAGyy- ; cor=; Ncor= a 0 0 0 0 0 14.0766 9.57207 36.5991 11.3739 23.0856 0.112613 0.112613 0.112613 78.491 0.112613 0.112613 6.41892 0 c 0 0 0 0 0 22.1847 20.3829 6.41892 7.77027 10.9234 99.6622 0.112613 0.112613 0.112613 0.112613 51.0135 48.3108 0 g 0 0 0 0 0 47.8604 69.9324 56.4189 80.7432 65.4279 0.112613 99.6622 99.6622 21.2838 99.6622 1.46396 18.5811 0 t 0 0 0 0 0 15.8784 0.112613 0.563063 0.112613 0.563063 0.112613 0.112613 0.112613 0.112613 0.112613 47.4099 26.6892 0
M07585_2.00_shift7 (ZNF331)				; oligos_6nt_mkv4_m1 versus M07585_2.00 (ZNF331); m=2/23; ncol2=12; w=0; offset=0; strand=D; shift=7; score=0.643739; -------yTGCwGAGCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 3.09406 19.9257 2.59901 0.123762 52.599 1.11386 95.6683 6.55941 1.60891 21.4109 9.03465 c 0 0 0 0 0 0 0 63.9851 4.08416 2.10396 99.6287 0.618812 0.123762 0.123762 0.123762 98.1436 69.9257 79.8267 g 0 0 0 0 0 0 0 3.58911 6.55941 95.1733 0.123762 1.60891 98.6386 3.58911 92.698 0.123762 0.123762 0.618812 t 0 0 0 0 0 0 0 29.3317 69.4307 0.123762 0.123762 45.1733 0.123762 0.618812 0.618812 0.123762 8.5396 10.5198
M11037_2.00_shift6 (M11037_2.00)				; oligos_6nt_mkv4_m1 versus M11037_2.00; m=3/23; ncol2=11; w=-1; offset=-1; strand=D; shift=6; score=0.599595; ------csCGCTGAGsy- ; cor=; Ncor= a 0 0 0 0 0 0 14 16 0 0 4.0404 4.0404 8.08081 96 4 2 15.1515 0 c 0 0 0 0 0 0 45 27 91.9192 5 93.9394 2.0202 0 0 4 55 32.3232 0 g 0 0 0 0 0 0 23 55 4.0404 93 0 2.0202 85.8586 2 92 26 24.2424 0 t 0 0 0 0 0 0 18 2 4.0404 2 2.0202 91.9192 6.06061 2 0 17 28.2828 0
M02698_2.00_shift6 (M02698_2.00)				; oligos_6nt_mkv4_m1 versus M02698_2.00; m=4/23; ncol2=11; w=-1; offset=-1; strand=D; shift=6; score=0.599595; ------csCGCTGAGsy- ; cor=; Ncor= a 0 0 0 0 0 0 14 16 0 0 4.0404 4.0404 8.08081 96 4 2 15.1515 0 c 0 0 0 0 0 0 45 27 91.9192 5 93.9394 2.0202 0 0 4 55 32.3232 0 g 0 0 0 0 0 0 23 55 4.0404 93 0 2.0202 85.8586 2 92 26 24.2424 0 t 0 0 0 0 0 0 18 2 4.0404 2 2.0202 91.9192 6.06061 2 0 17 28.2828 0
M08298_2.00_rc_shift6 (KLF7_rc)				; oligos_6nt_mkv4_m1 versus M08298_2.00_rc (KLF7_rc); m=5/23; ncol2=11; w=-1; offset=-1; strand=R; shift=6; score=0.590347; ------kGGGCGkgGcc- ; cor=; Ncor= a 0 0 0 0 0 0 24.055 0 0 0 0 0 0 18.5567 2.0619 9.9656 12.0275 0 c 0 0 0 0 0 0 9.622 0 0 0 80.756 0 0 0 0 57.0447 46.7354 0 g 0 0 0 0 0 0 37.1134 100 100 100 0 100 67.6976 61.512 88.6598 17.5258 20.2749 0 t 0 0 0 0 0 0 29.2096 0 0 0 19.244 0 32.3024 19.9313 9.2784 15.4639 20.9622 0
M08296_2.00_rc_shift4 (SP4_rc)				; oligos_6nt_mkv4_m1 versus M08296_2.00_rc (SP4_rc); m=6/23; ncol2=15; w=-3; offset=-3; strand=R; shift=4; score=0.557199; ----rgGRGGcGGrGCcd ; cor=; Ncor= a 0 0 0 0 32.996 19.0283 7.8947 30.3644 0.2024 0 19.8381 0 1.8219 35.0202 15.1822 7.4899 8.2996 25.9109 c 0 0 0 0 5.8704 4.8583 0 1.0121 0 0 67.6113 1.417 2.6316 3.4413 7.085 69.8381 48.583 14.9798 g 0 0 0 0 45.3441 63.9676 70.2429 68.6235 99.7976 99.7976 0 98.583 83.4008 56.2753 75.9109 11.1336 18.8259 26.5182 t 0 0 0 0 15.7895 12.1457 21.8623 0 0 0.2024 12.5506 0 12.1457 5.2632 1.8219 11.5385 24.2915 32.5911
M08323_2.00_rc_shift6 (KLF15_rc)				; oligos_6nt_mkv4_m1 versus M08323_2.00_rc (KLF15_rc); m=7/23; ncol2=15; w=-1; offset=-1; strand=R; shift=6; score=0.546444; ------GRGGcGGrGccg ; cor=; Ncor= a 0 0 0 0 0 0 17.0683 28.3133 0 0.6024 22.2892 0 0 41.7671 12.0482 19.2771 24.498 15.0602 c 0 0 0 0 0 0 3.2129 0.8032 0 0.2008 58.8353 0 3.012 1.2048 0 46.1847 36.1446 8.8353 g 0 0 0 0 0 0 69.0763 70.8835 100 99.1968 0 100 88.755 47.5904 85.3414 24.8996 23.0924 62.4498 t 0 0 0 0 0 0 10.6426 0 0 0 18.8755 0 8.2329 9.4378 2.6104 9.6386 16.2651 13.6546
M06160_2.00_rc_shift4 (M06160_2.00_rc)				; oligos_6nt_mkv4_m1 versus M06160_2.00_rc; m=8/23; ncol2=15; w=-3; offset=-3; strand=R; shift=4; score=0.516183; ----rgkGGGCGkGGCyw ; cor=; Ncor= a 0 0 0 0 36.7909 22.3473 13.3545 16.8521 0 0 5.88235 0.158983 0 21.7806 6.83625 7.47218 18.442 43.04 c 0 0 0 0 13.128 7.55627 1.43084 0 0 0 90.461 0 0 1.27186 5.40541 74.2448 42.4483 14.4 g 0 0 0 0 27.2285 62.701 42.1304 81.876 99.3641 99.2051 0 99.2051 60.5723 72.496 81.2401 0.953895 11.2878 8.96 t 0 0 0 0 22.8525 7.3955 43.0843 1.27186 0.63593 0.794913 3.6566 0.63593 39.4277 4.45151 6.51828 17.3291 27.8219 33.6
M08879_2.00_rc_shift5 (KLF12_rc)				; oligos_6nt_mkv4_m1 versus M08879_2.00_rc (KLF12_rc); m=9/23; ncol2=11; w=-2; offset=-2; strand=R; shift=5; score=0.508145; -----mgGGGCGGGGC-- ; cor=; Ncor= a 0 0 0 0 0 37.8319 24.7788 6.41593 0 0 9.0708 2.21239 0.442478 9.73451 1.32743 13.0531 0 0 c 0 0 0 0 0 34.292 3.09735 0 0.221239 0 87.8319 0.221239 0.884956 0 0.663717 80.0885 0 0 g 0 0 0 0 0 19.469 58.1858 93.1416 99.5575 100 0.221239 96.0177 79.2035 86.2832 96.4602 2.87611 0 0 t 0 0 0 0 0 8.40708 13.9381 0.442478 0.221239 0 2.87611 1.54867 19.469 3.9823 1.54867 3.9823 0 0
M10300_2.00_rc_shift4 (SP1_rc)				; oligos_6nt_mkv4_m1 versus M10300_2.00_rc (SP1_rc); m=10/23; ncol2=13; w=-3; offset=-3; strand=R; shift=4; score=0.503018; ----rggGGGCGGGgyb- ; cor=; Ncor= a 0 0 0 0 29.6296 22.2222 12.963 15.7407 0 0 17.5926 1.85185 0 19.4444 15.7407 2.77778 8.33333 0 c 0 0 0 0 19.4444 18.5185 9.25926 0.925926 0 1.85185 74.0741 4.62963 0.925926 4.62963 9.25926 50.9259 37.037 0 g 0 0 0 0 32.4074 51.8519 60.1852 82.4074 100 98.1481 0 91.6667 91.6667 70.3704 66.6667 19.4444 29.6296 0 t 0 0 0 0 18.5185 7.40741 17.5926 0.925926 0 0 8.33333 1.85185 7.40741 5.55556 8.33333 26.8519 25 0
M07616_2.00_rc_shift11 (ZNF610_rc)				; oligos_6nt_mkv4_m1 versus M07616_2.00_rc (ZNF610_rc); m=11/23; ncol2=9; w=0; offset=4; strand=R; shift=11; score=0.492568; -----------GGAGCGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0.0814332 0.0814332 99.7557 0.0814332 0.0814332 0.0814332 0.0814332 c 0 0 0 0 0 0 0 0 0 0 0 0.0814332 0.0814332 0.0814332 0.0814332 99.7557 0.0814332 14.4137 g 0 0 0 0 0 0 0 0 0 0 0 99.7557 99.7557 0.0814332 99.7557 0.0814332 99.7557 79.886 t 0 0 0 0 0 0 0 0 0 0 0 0.0814332 0.0814332 0.0814332 0.0814332 0.0814332 0.0814332 5.61889
M01913_2.00_shift5 (DNMT1)				; oligos_6nt_mkv4_m1 versus M01913_2.00 (DNMT1); m=12/23; ncol2=10; w=-2; offset=-2; strand=D; shift=5; score=0.492547; -----ssymgCGGsr--- ; cor=; Ncor= a 0 0 0 0 0 23.4138 22.394 17.2639 27.4855 19.1374 0.00313502 0.0301987 4.00612 21.9725 30.6596 0 0 0 c 0 0 0 0 0 28.0314 26.8105 34.4193 27.4855 16.4717 99.971 20.9062 13.9827 26.5703 20.1448 0 0 0 g 0 0 0 0 0 29.7648 30.5326 23.072 24.8699 43.4514 0.0197398 79.0471 77.3099 27.6546 30.9678 0 0 0 t 0 0 0 0 0 18.79 20.2629 25.2448 20.1591 20.9396 0 0.0165734 4.70122 23.8026 18.2278 0 0 0
M08326_2.00_rc_shift6 (SP2_rc)				; oligos_6nt_mkv4_m1 versus M08326_2.00_rc (SP2_rc); m=13/23; ncol2=9; w=-1; offset=-1; strand=R; shift=6; score=0.479975; ------gGGGCGGGg--- ; cor=; Ncor= a 0 0 0 0 0 0 11.4548 0.083612 0.083612 0.083612 0.083612 0.083612 0.083612 18.8127 21.4883 0 0 0 c 0 0 0 0 0 0 1.08696 0.083612 0.083612 0.083612 93.3946 0.083612 0.083612 0.083612 14.7993 0 0 0 g 0 0 0 0 0 0 64.9666 99.7492 99.7492 99.7492 0.083612 99.7492 97.408 74.3311 63.6288 0 0 0 t 0 0 0 0 0 0 22.4916 0.083612 0.083612 0.083612 6.43813 0.083612 2.42475 6.77258 0.083612 0 0 0
M08327_2.00_rc_shift11 (ZNF610_rc)				; oligos_6nt_mkv4_m1 versus M08327_2.00_rc (ZNF610_rc); m=14/23; ncol2=9; w=0; offset=4; strand=R; shift=11; score=0.475146; -----------GGAGCGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 11.3271 0.0670241 99.7989 0.0670241 0.0670241 0.0670241 0.0670241 c 0 0 0 0 0 0 0 0 0 0 0 5.42895 0.0670241 0.0670241 0.0670241 99.7989 0.0670241 4.89276 g 0 0 0 0 0 0 0 0 0 0 0 75.4021 99.7989 0.0670241 99.7989 0.0670241 99.7989 86.9303 t 0 0 0 0 0 0 0 0 0 0 0 7.84182 0.0670241 0.0670241 0.0670241 0.0670241 0.0670241 8.10992
M09259_2.00_shift8 (M09259_2.00)				; oligos_6nt_mkv4_m1 versus M09259_2.00; m=15/23; ncol2=7; w=0; offset=1; strand=D; shift=8; score=0.469995; --------sCCGGrr--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2.50053 0 0 0 0 57.5069 44.1707 0 0 0 c 0 0 0 0 0 0 0 0 59.1686 100 100 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 35.8303 0 0 100 100 42.4931 55.8293 0 0 0 t 0 0 0 0 0 0 0 0 2.50053 0 0 0 0 0 0 0 0 0
M09257_2.00_shift8 (MECP2)				; oligos_6nt_mkv4_m1 versus M09257_2.00 (MECP2); m=16/23; ncol2=7; w=0; offset=1; strand=D; shift=8; score=0.469995; --------sCCGGrr--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2.50053 0 0 0 0 57.5069 44.1707 0 0 0 c 0 0 0 0 0 0 0 0 59.1686 100 100 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 35.8303 0 0 100 100 42.4931 55.8293 0 0 0 t 0 0 0 0 0 0 0 0 2.50053 0 0 0 0 0 0 0 0 0
M00339_2.00_shift3 (PAX6)				; oligos_6nt_mkv4_m1 versus M00339_2.00 (PAX6); m=17/23; ncol2=13; w=-4; offset=-4; strand=D; shift=3; score=0.450314; ---grsacGgcGGwkc-- ; cor=; Ncor= a 0 0 0 22.6447 29.7397 17.8071 47.9093 5.06887 9.3262 9.19812 19.9138 2.37697 4.7031 48.1988 17.6587 19.9528 0 0 c 0 0 0 22.6447 20.3186 37.2742 17.409 65.1331 10.7374 9.44277 49.6149 11.617 4.7031 16.391 17.6587 40.1415 0 0 g 0 0 0 32.0658 29.6231 27.1116 16.603 15.3081 69.8687 60.5757 21.0027 83.6291 85.8907 7.2146 37.8474 19.9528 0 0 t 0 0 0 22.6447 20.3186 17.8071 18.0787 14.4899 10.0677 20.7834 9.4686 2.37697 4.7031 28.1956 26.8352 19.9528 0 0
M00224_2.00_rc_shift6 (KLF1_rc)				; oligos_6nt_mkv4_m1 versus M00224_2.00_rc (KLF1_rc); m=18/23; ncol2=8; w=-1; offset=-1; strand=R; shift=6; score=0.438301; ------dGGGCGkr---- ; cor=; Ncor= a 0 0 0 0 0 0 28.5511 0.110619 0.110619 0.110619 0.110619 0.110619 0.110619 49.8756 0 0 0 0 c 0 0 0 0 0 0 0.142045 0.110619 0.110619 0.110619 99.6681 0.110619 0.110619 0.124378 0 0 0 0 g 0 0 0 0 0 0 42.7557 99.6681 99.6681 99.6681 0.110619 99.6681 66.4823 49.8756 0 0 0 0 t 0 0 0 0 0 0 28.5511 0.110619 0.110619 0.110619 0.110619 0.110619 33.2965 0.124378 0 0 0 0
M01919_2.00_shift6 (M01919_2.00)				; oligos_6nt_mkv4_m1 versus M01919_2.00; m=19/23; ncol2=7; w=-1; offset=-1; strand=D; shift=6; score=0.426674; ------tyasCGg----- ; cor=; Ncor= a 0 0 0 0 0 0 24.0571 23.1338 33.9485 12.3203 0.0637745 2.27505 16.5154 0 0 0 0 0 c 0 0 0 0 0 0 24.7897 26.3454 22.7563 31.5398 98.2581 0.00291467 13.254 0 0 0 0 0 g 0 0 0 0 0 0 24.2988 20.5178 21.4311 37.76 0.000141614 97.7099 45.3448 0 0 0 0 0 t 0 0 0 0 0 0 26.8544 30.0029 21.8641 18.3798 1.67799 0.0121795 24.8858 0 0 0 0 0
M08975_2.00_rc_shift0 (M08975_2.00_rc)				; oligos_6nt_mkv4_m1 versus M08975_2.00_rc; m=20/23; ncol2=20; w=-7; offset=-7; strand=R; shift=0; score=0.420824; grgmargrGGCGGrGccr ; cor=; Ncor= a 22.2445 26.6533 14.0281 40.481 52.7054 34.6693 23.0461 34.2685 6.81363 3.60721 12.4248 5.61122 5.41082 35.2705 21.4429 19.8397 24.8497 32.6653 c 24.8497 14.8297 18.0361 25.0501 11.2224 2.60521 1.80361 2.00401 1.2024 0.400802 76.9539 1.60321 1.80361 3.00601 1.002 59.7194 41.483 7.81563 g 45.491 46.2926 60.521 24.8497 22.4449 54.9098 63.7275 61.523 90.1804 93.5872 1.002 85.5711 86.1723 56.7134 74.7495 14.2285 12.4248 36.4729 t 7.41483 12.2244 7.41483 9.61924 13.6273 7.81563 11.4228 2.20441 1.80361 2.40481 9.61924 7.21443 6.61323 5.01002 2.80561 6.21242 21.2425 23.0461
M08873_2.00_rc_shift0 (SP4_rc)				; oligos_6nt_mkv4_m1 versus M08873_2.00_rc (SP4_rc); m=21/23; ncol2=20; w=-7; offset=-7; strand=R; shift=0; score=0.420824; grgmargrGGCGGrGccr ; cor=; Ncor= a 22.2445 26.6533 14.0281 40.481 52.7054 34.6693 23.0461 34.2685 6.81363 3.60721 12.4248 5.61122 5.41082 35.2705 21.4429 19.8397 24.8497 32.6653 c 24.8497 14.8297 18.0361 25.0501 11.2224 2.60521 1.80361 2.00401 1.2024 0.400802 76.9539 1.60321 1.80361 3.00601 1.002 59.7194 41.483 7.81563 g 45.491 46.2926 60.521 24.8497 22.4449 54.9098 63.7275 61.523 90.1804 93.5872 1.002 85.5711 86.1723 56.7134 74.7495 14.2285 12.4248 36.4729 t 7.41483 12.2244 7.41483 9.61924 13.6273 7.81563 11.4228 2.20441 1.80361 2.40481 9.61924 7.21443 6.61323 5.01002 2.80561 6.21242 21.2425 23.0461
M08954_2.00_rc_shift11 (ZBTB14_rc)				; oligos_6nt_mkv4_m1 versus M08954_2.00_rc (ZBTB14_rc); m=22/23; ncol2=9; w=0; offset=4; strand=R; shift=11; score=0.41039; -----------gGwGCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 17.6715 9.35551 67.5676 2.4948 1.0395 1.2474 7.69231 c 0 0 0 0 0 0 0 0 0 0 0 19.5426 9.77131 0 1.0395 96.8815 0.4158 91.8919 g 0 0 0 0 0 0 0 0 0 0 0 48.8565 77.9626 0.2079 95.0104 1.4553 97.2973 0.2079 t 0 0 0 0 0 0 0 0 0 0 0 13.9293 2.9106 32.2245 1.4553 0.623701 1.0395 0.2079
M02541_2.00_shift6 (M02541_2.00)				; oligos_6nt_mkv4_m1 versus M02541_2.00; m=23/23; ncol2=8; w=-1; offset=-1; strand=D; shift=6; score=0.409065; ------CCCGCGGG---- ; cor=; Ncor= a 0 0 0 0 0 0 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0 0 0 0 c 0 0 0 0 0 0 97.1154 97.1154 97.1154 0.961538 97.1154 0.961538 0.961538 0.961538 0 0 0 0 g 0 0 0 0 0 0 0.961538 0.961538 0.961538 97.1154 0.961538 97.1154 97.1154 97.1154 0 0 0 0 t 0 0 0 0 0 0 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0 0 0 0