/var/www/html/rsat/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/oligos_7nt_mkv5_m2/peak-motifs_oligos_7nt_mkv5_m2_vs_db_cisBP_Homo_sapiens.tab 
 compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/oligos_7nt_mkv5_m2/peak-motifs_oligos_7nt_mkv5_m2.tf -format2 tf -file2 $RSAT/public_html/motif_databases/cisBP2/cisBP_Homo_sapiens_2019.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/oligos_7nt_mkv5_m2/peak-motifs_oligos_7nt_mkv5_m2_vs_db_cisBP_Homo_sapiens
 Program version       	1.118
 Quick mode 
 Input files
	file2 	$RSAT/public_html/motif_databases/cisBP2/cisBP_Homo_sapiens_2019.tf
	file1 	$RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/oligos_7nt_mkv5_m2/peak-motifs_oligos_7nt_mkv5_m2.tf
 Output files
	match_table_html	$RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/oligos_7nt_mkv5_m2/peak-motifs_oligos_7nt_mkv5_m2_vs_db_cisBP_Homo_sapiens.html
	match_table_txt	$RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/oligos_7nt_mkv5_m2/peak-motifs_oligos_7nt_mkv5_m2_vs_db_cisBP_Homo_sapiens.tab
	alignments_1ton_html	$RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/oligos_7nt_mkv5_m2/peak-motifs_oligos_7nt_mkv5_m2_vs_db_cisBP_Homo_sapiens_alignments_1ton.html
	alignments_1ton	$RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/oligos_7nt_mkv5_m2/peak-motifs_oligos_7nt_mkv5_m2_vs_db_cisBP_Homo_sapiens_alignments_1ton.tab
	prefix       	$RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/oligos_7nt_mkv5_m2/peak-motifs_oligos_7nt_mkv5_m2_vs_db_cisBP_Homo_sapiens
	html_index   	$RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/oligos_7nt_mkv5_m2/peak-motifs_oligos_7nt_mkv5_m2_vs_db_cisBP_Homo_sapiens_index.html
 Matrices
	file1	1 matrices	$RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/oligos_7nt_mkv5_m2/peak-motifs_oligos_7nt_mkv5_m2.tf
		file1	1	12	14454
	file2	6607 matrices	$RSAT/public_html/motif_databases/cisBP2/cisBP_Homo_sapiens_2019.tf
		file2		1		7		100.0001
		file2		2		9		100.0001
		file2		3		8		100.00002892
		file2		4		9		100.0001
		file2		5		10		100.0001
		file2		6		11		100.00004702
		file2		7		10		100.00006
		file2		8		10		100.00005411
		file2		9		10		100.000031
		file2		10		10		100.0001
		file2		11		9		100
		...	6597 more matrices
 Column content
	1	id1          	Identifier of the first matrix
	2	id2          	Identifier of the second matrix
	3	name1        	Name of the first matrix
	4	name2        	Name of the second matrix
	5	cor          	Pearson coefficient of correlation between frequency matrices
	6	Ncor         	Normalized correlation. Ncor = cor * Wr
	7	w1           	Width of the first matrix
	8	w2           	Width of the second matrix
	9	w            	Alignment length (number of overlapping columns between matrix 1 and matrix 2, as a function of the offset)
	10	W            	Total alignment length (overlapping + non-overlapping columns). W = w1 + w2 - w
	11	Wr           	Relative alignment length (overlap divided by the total alignemnt length). Wr = w/W
	12	wr1          	Alignment length relative to the width of the first matrix. wr1 = w/w1
	13	wr2          	Alignment length relative to the width of the second matrix. wr2 = w/w2
	14	strand       	"strand", i.e. orientation of matrix 2 relative to matrix 1 (D=direct;  R=reverse)
	15	offset       	shift of the second matrix relative to the first matrix (negative:left; positive: right)
id1 id2 name1 name2 cor Ncor w1 w2 w W Wr wr1 wr2 strand offset
oligos_7nt_mkv5_m2 M05860_2.00 oligos_7nt_mkv5_m2 M05860_2.00 0.716 0.661 12 13 12 13 0.9231 1.0000 0.9231 R 0
oligos_7nt_mkv5_m2 M08996_2.00 oligos_7nt_mkv5_m2 M08996_2.00 0.746 0.639 12 14 12 14 0.8571 1.0000 0.8571 R -1
oligos_7nt_mkv5_m2 M07928_2.00 oligos_7nt_mkv5_m2 EGR1 0.791 0.633 12 15 12 15 0.8000 1.0000 0.8000 R -2
oligos_7nt_mkv5_m2 M07723_2.00 oligos_7nt_mkv5_m2 ZNF860 0.757 0.605 12 15 12 15 0.8000 1.0000 0.8000 R -1
oligos_7nt_mkv5_m2 M00765_2.00 oligos_7nt_mkv5_m2 M00765_2.00 0.782 0.587 12 9 9 12 0.7500 0.7500 1.0000 R 3
oligos_7nt_mkv5_m2 M08290_2.00 oligos_7nt_mkv5_m2 MAZ 0.777 0.583 12 9 9 12 0.7500 0.7500 1.0000 R 3
oligos_7nt_mkv5_m2 M09034_2.00 oligos_7nt_mkv5_m2 E2F6 0.729 0.573 12 13 11 14 0.7857 0.9167 0.8462 D -2
oligos_7nt_mkv5_m2 M07616_2.00 oligos_7nt_mkv5_m2 ZNF610 0.930 0.573 12 9 8 13 0.6154 0.6667 0.8889 R 4
oligos_7nt_mkv5_m2 M09038_2.00 oligos_7nt_mkv5_m2 M09038_2.00 0.823 0.570 12 10 9 13 0.6923 0.7500 0.9000 D -1
oligos_7nt_mkv5_m2 M08109_2.00 oligos_7nt_mkv5_m2 E2F4 0.733 0.564 12 11 10 13 0.7692 0.8333 0.9091 D -1
oligos_7nt_mkv5_m2 M08107_2.00 oligos_7nt_mkv5_m2 E2F6 0.729 0.561 12 11 10 13 0.7692 0.8333 0.9091 D -1
oligos_7nt_mkv5_m2 M08349_2.00 oligos_7nt_mkv5_m2 EGR3 0.742 0.556 12 9 9 12 0.7500 0.7500 1.0000 R 1
oligos_7nt_mkv5_m2 M01862_2.00 oligos_7nt_mkv5_m2 M01862_2.00 0.740 0.555 12 9 9 12 0.7500 0.7500 1.0000 R 3
oligos_7nt_mkv5_m2 M08327_2.00 oligos_7nt_mkv5_m2 ZNF610 0.897 0.552 12 9 8 13 0.6154 0.6667 0.8889 R 4
oligos_7nt_mkv5_m2 M04698_2.00 oligos_7nt_mkv5_m2 E2F2 0.715 0.550 12 11 10 13 0.7692 0.8333 0.9091 D 2
oligos_7nt_mkv5_m2 M08302_2.00 oligos_7nt_mkv5_m2 EGR2 0.732 0.549 12 9 9 12 0.7500 0.7500 1.0000 R 1
oligos_7nt_mkv5_m2 M00242_2.00 oligos_7nt_mkv5_m2 KLF11 0.816 0.544 12 8 8 12 0.6667 0.6667 1.0000 R 3
oligos_7nt_mkv5_m2 M00241_2.00 oligos_7nt_mkv5_m2 KLF11 0.815 0.543 12 8 8 12 0.6667 0.6667 1.0000 R 3
oligos_7nt_mkv5_m2 M08108_2.00 oligos_7nt_mkv5_m2 TFDP1,TFDP2,TFDP3 0.705 0.542 12 11 10 13 0.7692 0.8333 0.9091 D -1
oligos_7nt_mkv5_m2 M09043_2.00 oligos_7nt_mkv5_m2 M09043_2.00 0.755 0.539 12 12 10 14 0.7143 0.8333 0.8333 D -2
oligos_7nt_mkv5_m2 M07949_2.00 oligos_7nt_mkv5_m2 ELF1,ETV3L 0.700 0.539 12 11 10 13 0.7692 0.8333 0.9091 D -1
oligos_7nt_mkv5_m2 M07652_2.00 oligos_7nt_mkv5_m2 ZNF543 0.715 0.511 12 12 10 14 0.7143 0.8333 0.8333 R 2
oligos_7nt_mkv5_m2 M07754_2.00 oligos_7nt_mkv5_m2 ZNF468 0.714 0.510 12 12 10 14 0.7143 0.8333 0.8333 R 2
oligos_7nt_mkv5_m2 M08287_2.00 oligos_7nt_mkv5_m2 PATZ1 0.743 0.495 12 8 8 12 0.6667 0.6667 1.0000 R 3
oligos_7nt_mkv5_m2 M07707_2.00 oligos_7nt_mkv5_m2 ZNF846 0.989 0.494 12 6 6 12 0.5000 0.5000 1.0000 R 1
oligos_7nt_mkv5_m2 M07940_2.00 oligos_7nt_mkv5_m2 E2F6 0.769 0.494 12 11 9 14 0.6429 0.7500 0.8182 D -2
oligos_7nt_mkv5_m2 M08954_2.00 oligos_7nt_mkv5_m2 ZBTB14 0.803 0.494 12 9 8 13 0.6154 0.6667 0.8889 R 4
oligos_7nt_mkv5_m2 M07939_2.00 oligos_7nt_mkv5_m2 E2F6 0.766 0.492 12 11 9 14 0.6429 0.7500 0.8182 D -2
oligos_7nt_mkv5_m2 M00632_2.00 oligos_7nt_mkv5_m2 M00632_2.00 0.709 0.491 12 10 9 13 0.6923 0.7500 0.9000 R 3
oligos_7nt_mkv5_m2 M07941_2.00 oligos_7nt_mkv5_m2 E2F6 0.763 0.490 12 11 9 14 0.6429 0.7500 0.8182 D -2
oligos_7nt_mkv5_m2 M00622_2.00 oligos_7nt_mkv5_m2 M00622_2.00 0.733 0.489 12 8 8 12 0.6667 0.6667 1.0000 R 2
oligos_7nt_mkv5_m2 M07947_2.00 oligos_7nt_mkv5_m2 ELF1,ETV3L 0.707 0.486 12 15 11 16 0.6875 0.9167 0.7333 D -4
oligos_7nt_mkv5_m2 M00224_2.00 oligos_7nt_mkv5_m2 KLF1 0.715 0.476 12 8 8 12 0.6667 0.6667 1.0000 R 4
oligos_7nt_mkv5_m2 M09036_2.00 oligos_7nt_mkv5_m2 E2F4 0.714 0.476 12 13 10 15 0.6667 0.8333 0.7692 D -3
oligos_7nt_mkv5_m2 M09505_2.00 oligos_7nt_mkv5_m2 MAZ 0.711 0.474 12 8 8 12 0.6667 0.6667 1.0000 R 3
oligos_7nt_mkv5_m2 M06090_2.00 oligos_7nt_mkv5_m2 M06090_2.00 0.711 0.474 12 8 8 12 0.6667 0.6667 1.0000 R 1
oligos_7nt_mkv5_m2 M07626_2.00 oligos_7nt_mkv5_m2 ZNF282 0.931 0.465 12 6 6 12 0.5000 0.5000 1.0000 R 2
oligos_7nt_mkv5_m2 M08326_2.00 oligos_7nt_mkv5_m2 SP2 0.755 0.465 12 9 8 13 0.6154 0.6667 0.8889 R 4
oligos_7nt_mkv5_m2 M07927_2.00 oligos_7nt_mkv5_m2 EGR1 0.769 0.462 12 20 12 20 0.6000 1.0000 0.6000 R -1
oligos_7nt_mkv5_m2 M02888_2.00 oligos_7nt_mkv5_m2 KLF16 0.713 0.459 12 11 9 14 0.6429 0.7500 0.8182 R 3
oligos_7nt_mkv5_m2 M07929_2.00 oligos_7nt_mkv5_m2 EGR1 0.749 0.450 12 20 12 20 0.6000 1.0000 0.6000 R 0
oligos_7nt_mkv5_m2 M08387_2.00 oligos_7nt_mkv5_m2 ZBTB14 0.729 0.449 12 9 8 13 0.6154 0.6667 0.8889 R 4
oligos_7nt_mkv5_m2 M09030_2.00 oligos_7nt_mkv5_m2 E2F1 0.718 0.449 12 14 10 16 0.6250 0.8333 0.7143 D -4
oligos_7nt_mkv5_m2 M08279_2.00 oligos_7nt_mkv5_m2 ZNF37A 0.724 0.446 12 9 8 13 0.6154 0.6667 0.8889 R 4
oligos_7nt_mkv5_m2 M09257_2.00 oligos_7nt_mkv5_m2 MECP2 0.753 0.439 12 7 7 12 0.5833 0.5833 1.0000 D 0
oligos_7nt_mkv5_m2 M09259_2.00 oligos_7nt_mkv5_m2 M09259_2.00 0.753 0.439 12 7 7 12 0.5833 0.5833 1.0000 D 0
oligos_7nt_mkv5_m2 M08275_2.00 oligos_7nt_mkv5_m2 ZFP64 0.725 0.427 12 15 10 17 0.5882 0.8333 0.6667 R -5
oligos_7nt_mkv5_m2 M09041_2.00 oligos_7nt_mkv5_m2 M09041_2.00 0.711 0.426 12 12 9 15 0.6000 0.7500 0.7500 D -3
oligos_7nt_mkv5_m2 M09521_2.00 oligos_7nt_mkv5_m2 E2F1 0.737 0.421 12 10 8 14 0.5714 0.6667 0.8000 D -2 
 Host name	rsat
 Job started	2026-01-04.220844
 Job done	2026-01-04.220856
 Seconds	2.91
	user	2.91
	system	0.99
	cuser	6.47
;	csystem	1.44