One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/oligos_7nt_mkv5_m3/peak-motifs_oligos_7nt_mkv5_m3.tf -format2 tf -file2 $RSAT/public_html/motif_databases/cisBP2/cisBP_Homo_sapiens_2019.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/oligos_7nt_mkv5_m3/peak-motifs_oligos_7nt_mkv5_m3_vs_db_cisBP_Homo_sapiens

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv5_m3_shift5 ; 242 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv5_m3_shift5 (oligos_7nt_mkv5_m3)
; oligos_7nt_mkv5_m3; m=0 (reference); ncol1=11; shift=5; ncol=16; -----wtATTTTTAww ; Alignment reference a 0 0 0 0 0 6128 5376 17701 1060 1433 672 1169 1446 17563 6843 7102 c 0 0 0 0 0 3509 5122 1136 776 461 394 651 977 1147 3654 3601 g 0 0 0 0 0 4469 3873 1162 808 801 418 730 773 1002 3673 3889 t 0 0 0 0 0 7500 7235 1607 18962 18911 20122 19056 18410 1894 7436 7014

M09597_2.00_rc_shift4 (BORCS8-MEF2B,MEF2C_rc)
; oligos_7nt_mkv5_m3 versus M09597_2.00_rc (BORCS8-MEF2B,MEF2C_rc); m=1/241; ncol2=12; w=-1; offset=-1; strand=R; shift=4; score=0.722452; ----kCTATTTttrgh ; cor=; Ncor= a 0 0 0 0 10.8 5 0.5 92.9 9.3 9.9 6.4 20.2 16.2 53.8 14.6 30.5 c 0 0 0 0 10 69.3 5.8 1.1 0.7 2.4 4.3 17.5 7.8 0.1 6.5 33.7 g 0 0 0 0 43.9 6.2 0.2 3 1 0.6 0.6 3.3 11.9 44.4 60 9.9 t 0 0 0 0 35.2 19.5 93.5 3 89 87.1 88.7 59 64.1 1.7 18.9 25.9

M03340_2.00_rc_shift4 (BORCS8-MEF2B,MEF2A_rc)
; oligos_7nt_mkv5_m3 versus M03340_2.00_rc (BORCS8-MEF2B,MEF2A_rc); m=2/241; ncol2=12; w=-1; offset=-1; strand=R; shift=4; score=0.70964; ----kCTATTTwTAGm ; cor=; Ncor= a 0 0 0 0 8.58175 1.04076 0.102669 99.7945 3.84615 4.99022 13.7411 46.6598 0.408998 99.0816 4.73978 40.556 c 0 0 0 0 3.7037 84.2151 0 0 0 0 0 0.20555 0 0 0.27881 38.8389 g 0 0 0 0 33.243 0.433651 0.205339 0.20555 0.394477 0 0.177305 0 0.306748 0.918367 90.2416 7.03189 t 0 0 0 0 54.4715 14.3105 99.692 0 95.7594 95.0098 86.0816 53.1346 99.2843 0 4.73978 13.5732

M02745_2.00_rc_shift5 (BORCS8-MEF2B,MEF2C_rc)
; oligos_7nt_mkv5_m3 versus M02745_2.00_rc (BORCS8-MEF2B,MEF2C_rc); m=3/241; ncol2=12; w=0; offset=0; strand=R; shift=5; score=0.707547; -----CTATTTwTAGt ; cor=; Ncor= a 0 0 0 0 0 0.447761 0.0501002 99.7492 0.0501505 3.06271 2.30505 36.9846 0.150225 99.7492 0.0501505 24.8523 c 0 0 0 0 0 98.9552 0.0501002 0.200602 0.150451 0.0486145 0.147131 0.283286 0.2003 0.100301 0.100301 12.4106 g 0 0 0 0 0 0.149254 0.250501 0.0501505 0.0501505 0.194458 0 0.125905 0.0500751 0.0501505 99.7492 0.870918 t 0 0 0 0 0 0.447761 99.6493 0 99.7492 96.6942 97.5478 62.6062 99.5994 0.100301 0.100301 61.8663

M09248_2.00_rc_shift3 (BORCS8-MEF2B,MEF2C_rc)
; oligos_7nt_mkv5_m3 versus M09248_2.00_rc (BORCS8-MEF2B,MEF2C_rc); m=4/241; ncol2=13; w=-2; offset=-2; strand=R; shift=3; score=0.689004; ---dkCTATTTTTrgm ; cor=; Ncor= a 0 0 0 29.8 10.4 3 0.2 94.8 6 8 2.4 14.8 13.8 56.6 15.4 36 c 0 0 0 7.4 9.2 69.2 6.2 1.6 0.6 1.2 3.8 9 4.2 0.4 7.2 36.4 g 0 0 0 28.4 42 4.6 0 0.6 0.2 0.6 1 2.2 12.2 42.2 63.4 10.2 t 0 0 0 34.4 38.4 23.2 93.6 3 93.2 90.2 92.8 74 69.8 0.8 14 17.4

M03343_2.00_rc_shift4 (BORCS8-MEF2B,MEF2D_rc)
; oligos_7nt_mkv5_m3 versus M03343_2.00_rc (BORCS8-MEF2B,MEF2D_rc); m=5/241; ncol2=12; w=-1; offset=-1; strand=R; shift=4; score= 0.6867; ----kCTATTTwTAGh ; cor=; Ncor= a 0 0 0 0 9.05713 0.0811162 0 100 1.17447 3.60345 11.8147 52.0413 0.103111 99.571 0.900748 28.2908 c 0 0 0 0 1.08376 94.1434 0.0688824 0 0.0170213 0.0332116 0 0.0344531 0.0343702 0 0 33.3046 g 0 0 0 0 40.2229 0.275795 0 0 0.0340426 0 0.0607441 0 0.137481 0.377488 98.6234 1.87802 t 0 0 0 0 49.6362 5.49968 99.9311 0 98.7745 96.3633 88.1245 47.9242 99.725 0.0514756 0.475867 36.5265

M09247_2.00_rc_shift3 (BORCS8-MEF2B,MEF2A_rc)
; oligos_7nt_mkv5_m3 versus M09247_2.00_rc (BORCS8-MEF2B,MEF2A_rc); m=6/241; ncol2=13; w=-2; offset=-2; strand=R; shift=3; score=0.681144; ---wkCTATTTTTrgm ; cor=; Ncor= a 0 0 0 27.4 12.8 2.8 0.2 92.8 6.4 10.2 1.4 13.4 14 55 16 36 c 0 0 0 7.8 8 72.4 5.6 0.6 0.2 0.2 4.8 8.2 3.6 0.2 3.8 38.4 g 0 0 0 24.4 38.8 5 0 0.8 0.8 0.4 1 1.2 11.6 43.6 65.8 10.4 t 0 0 0 40.4 40.4 19.8 94.2 5.8 92.6 89.2 92.8 77.2 70.8 1.2 14.4 15.2

M03344_2.00_rc_shift4 (BORCS8-MEF2B,MEF2B_rc)
; oligos_7nt_mkv5_m3 versus M03344_2.00_rc (BORCS8-MEF2B,MEF2B_rc); m=7/241; ncol2=12; w=-1; offset=-1; strand=R; shift=4; score=0.668087; ----kCTATTTwTAGy ; cor=; Ncor= a 0 0 0 0 13.4718 0.0917431 0.0949968 100 1.40845 4.33596 18.3368 52.5063 0.473934 99.2126 0.377358 13.5461 c 0 0 0 0 2.63578 96.3303 0.0633312 0 0 0.0606428 0.309917 0 0 0 0 47.3712 g 0 0 0 0 56.9223 0.58104 0.0949968 0 0 0.0909642 0 0.0634518 0 0.787402 99.0566 1.93133 t 0 0 0 0 26.9702 2.99694 99.7467 0 98.5915 95.5124 81.3533 47.4302 99.5261 0 0.566038 37.1513

M03581_2.00_rc_shift8 (CPEB1_rc)
; oligos_7nt_mkv5_m3 versus M03581_2.00_rc (CPEB1_rc); m=8/241; ncol2=8; w=0; offset=3; strand=R; shift=8; score=0.662299; --------tTTTTATt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 14.3967 0 2.75678 4.47653 0.58627 99.0098 2.18391 17.3424 c 0 0 0 0 0 0 0 0 24.9787 0.58003 3.30422 0.599947 1.26116 0.433228 13.7299 24.9502 g 0 0 0 0 0 0 0 0 9.00192 0 0.104275 0 0 0 1.33908 5.13649 t 0 0 0 0 0 0 0 0 51.6227 99.42 93.8347 94.9235 98.1526 0.557007 82.7471 52.5709

M00710_2.00_rc_shift5 (SOX1_rc)
; oligos_7nt_mkv5_m3 versus M00710_2.00_rc (SOX1_rc); m=9/241; ncol2=10; w=0; offset=0; strand=R; shift=5; score= 0.6599; -----ctATTGTTyw- ; cor=; Ncor= a 0 0 0 0 0 15.0773 18.7572 99.9567 0.0144469 0.0144469 10.291 0.0144469 10.291 20.8429 25.1536 0 c 0 0 0 0 0 37.1677 10.1374 0.0144469 0.0144469 0.0144469 0.0144469 0.0144469 0.0144469 28.9058 14.8771 0 g 0 0 0 0 0 23.7286 10.1374 0.0144469 0.0144469 0.0144469 80.731 8.96351 0.0144469 20.418 14.8771 0 t 0 0 0 0 0 24.0264 60.968 0.0144469 99.9567 99.9567 8.96351 91.0076 89.6801 29.8333 45.0923 0

M08090_2.00_shift5 (ZNF384)
; oligos_7nt_mkv5_m3 versus M08090_2.00 (ZNF384); m=10/241; ncol2=12; w=0; offset=0; strand=D; shift=5; score=0.659684; -----ttTTTTTTkww ; cor=; Ncor= a 0 0 0 0 0 15.2992 14.5763 0.069004 0.627608 0.502744 1.03177 0.61775 0.193868 16.0878 41.984 30.0956 c 0 0 0 0 0 9.52256 9.0921 0 0.0460027 0.0492886 0.0854336 0.0624322 0.0427168 15.5128 15.3715 16.8666 g 0 0 0 0 0 13.022 9.55542 0.0197154 0.0854336 0.0427168 0.069004 0.115007 0.0230013 25.2719 11.3561 23.0835 t 0 0 0 0 0 62.1562 66.7762 99.9113 99.241 99.4053 98.8138 99.2048 99.7404 43.1275 31.2884 29.9543

M01104_2.00_rc_shift6 (M01104_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01104_2.00_rc; m=11/241; ncol2=10; w=0; offset=1; strand=R; shift=6; score=0.658466; ------dwwTwwtttw ; cor=; Ncor= a 0 0 0 0 0 0 32.5326 67.4102 39.3945 20.2484 37.3711 42.1174 22.608 23.1727 22.404 34.642 c 0 0 0 0 0 0 10.7214 2.88867 0.0397012 0.0336438 7.69751 12.3106 22.608 17.5135 22.6292 17.0315 g 0 0 0 0 0 0 26.108 0.0115716 0.00624251 0.0336438 4.48571 8.58882 10.1584 19.9449 19.4771 20.8023 t 0 0 0 0 0 0 30.638 29.6896 60.5595 79.6844 50.4457 36.9831 44.6255 39.3688 35.4896 27.5242

M11309_2.00_rc_shift5 (SOX1,SOX5_rc)
; oligos_7nt_mkv5_m3 versus M11309_2.00_rc (SOX1,SOX5_rc); m=12/241; ncol2=10; w=0; offset=0; strand=R; shift=5; score=0.65292; -----syATTGTTwr- ; cor=; Ncor= a 0 0 0 0 0 21.7391 17.3913 100 0 0 4.34783 0 4.34783 36.3636 40.9091 0 c 0 0 0 0 0 26.087 26.087 0 0 0 0 4.34783 4.34783 13.6364 13.6364 0 g 0 0 0 0 0 30.4348 13.0435 0 4.34783 0 95.6522 0 0 18.1818 27.2727 0 t 0 0 0 0 0 21.7391 43.4783 0 95.6522 100 0 95.6522 91.3043 31.8182 18.1818 0

M09255_2.00_rc_shift3 (BORCS8-MEF2B_rc)
; oligos_7nt_mkv5_m3 versus M09255_2.00_rc (BORCS8-MEF2B_rc); m=13/241; ncol2=14; w=-2; offset=-2; strand=R; shift=3; score=0.639599; ---wkCTATTTtTrgm ; cor=; Ncor= a 0 0 0 28.9738 12.2736 5.03018 1.60966 90.7445 7.64588 5.6338 5.6338 17.505 14.8893 61.3682 13.6821 31.992 c 0 0 0 8.04829 8.2495 68.2093 7.84708 1.40845 2.01207 1.60966 5.6338 12.4748 2.8169 1.20724 5.03018 40.2414 g 0 0 0 22.5352 38.2294 5.4326 0.804829 3.42052 1.20724 1.40845 2.01207 2.61569 8.4507 35.4125 67.2032 11.2676 t 0 0 0 40.4427 41.2475 21.328 89.7384 4.42656 89.1348 91.3481 86.7203 67.4044 73.8431 2.01207 14.0845 16.499

M05866_2.00_rc_shift5 (FOXP2,FOXP4_rc)
; oligos_7nt_mkv5_m3 versus M05866_2.00_rc (FOXP2,FOXP4_rc); m=14/241; ncol2=10; w=0; offset=0; strand=R; shift=5; score=0.637251; -----wttTrTTTAy- ; cor=; Ncor= a 0 0 0 0 0 34.2 24.7 23.7 4 31.6 4 5.6 4.3 77.9 7.9 0 c 0 0 0 0 0 13.7 20.4 10.1 1.7 0.9 2.2 1.7 0.9 1.6 52.7 0 g 0 0 0 0 0 18.8 23.2 9.8 4.6 65 2.9 9.3 16.3 6.5 5.6 0 t 0 0 0 0 0 33.3 31.7 56.5 89.6 2.5 90.9 83.4 78.5 14 33.8 0

M00254_2.00_rc_shift6 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M00254_2.00_rc (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXS1_rc); m=15/241; ncol2=10; w=0; offset=1; strand=R; shift=6; score=0.636898; ------gtTGTTTAyt ; cor=; Ncor= a 0 0 0 0 0 0 22.729 24.1129 0.0230777 8.94953 0.0230777 20.2765 0.0230777 88.2878 13.937 12.3807 c 0 0 0 0 0 0 22.729 22.9966 0.0230777 0.0230777 0.0230777 0.0230777 0.0230777 0.0230777 32.4128 21.051 g 0 0 0 0 0 0 31.8131 21.2529 0.0230777 91.0043 0.0230777 0.0230777 0.0230777 0.0230777 2.2941 12.3807 t 0 0 0 0 0 0 22.729 31.6376 99.9308 0.0230777 99.9308 79.6773 99.9308 11.666 51.3561 54.1876

M02532_2.00_rc_shift4 (LIN54_rc)
; oligos_7nt_mkv5_m3 versus M02532_2.00_rc (LIN54_rc); m=16/241; ncol2=13; w=-1; offset=-1; strand=R; shift=4; score=0.628589; ----maaAATTTwaaw ; cor=; Ncor= a 0 0 0 0 29.4886 27.1117 67.8023 77.7623 82.095 0 0 0 26.2905 62.6998 57.1704 38.6975 c 0 0 0 0 29.4886 24.0964 10.7326 7.41257 3.23238 0.00909916 0.00909916 0.00909916 12.7056 9.59039 14.2765 17.5965 g 0 0 0 0 20.5114 24.396 10.7326 7.41257 3.23238 0.00909916 0.00909916 8.21699 13.1754 18.1194 14.2765 17.5965 t 0 0 0 0 20.5114 24.396 10.7326 7.41257 11.4403 99.9727 99.9727 91.7648 47.8285 9.59039 14.2765 26.1094

M09252_2.00_rc_shift3 (BORCS8-MEF2B_rc)
; oligos_7nt_mkv5_m3 versus M09252_2.00_rc (BORCS8-MEF2B_rc); m=17/241; ncol2=14; w=-2; offset=-2; strand=R; shift=3; score= 0.621; ---dkCTATTTwTAGm ; cor=; Ncor= a 0 0 0 29.4 7.2 2.6 0.2 96.2 5.8 8 9 29.6 7.6 76.4 8.6 30.2 c 0 0 0 6 7.4 75.4 2.4 0 0.4 2.2 3.2 9 1 0 3.4 47.4 g 0 0 0 30.2 48.8 6 0.6 0.4 0.4 0.8 0.6 1.4 5 22.4 78.8 6.4 t 0 0 0 34.4 36.6 16 96.8 3.4 93.4 89 87.2 60 86.4 1.2 9.2 16

M09250_2.00_rc_shift3 (BORCS8-MEF2B,MEF2D_rc)
; oligos_7nt_mkv5_m3 versus M09250_2.00_rc (BORCS8-MEF2B,MEF2D_rc); m=18/241; ncol2=12; w=-2; offset=-2; strand=R; shift=3; score=0.615402; ---dkCTATTTwTAG- ; cor=; Ncor= a 0 0 0 31.2 6.8 2.4 0.2 97 5.4 8 9.4 29.8 8.6 75.4 9.4 0 c 0 0 0 5.6 6.4 75.8 2 0.2 0.6 1.2 4 8.6 1.4 0 3.2 0 g 0 0 0 30.2 50 6 0.6 0.2 0.4 0.8 0.6 1.2 5.4 23.6 78.6 0 t 0 0 0 33 36.8 15.8 97.2 2.6 93.6 90 86 60.4 84.6 1 8.8 0

M07439_2.00_rc_shift4 (M07439_2.00_rc)
; oligos_7nt_mkv5_m3 versus M07439_2.00_rc; m=19/241; ncol2=9; w=-1; offset=-1; strand=R; shift=4; score=0.599245; ----awwATTTwt--- ; cor=; Ncor= a 0 0 0 0 50 52 62 100 0 8 24 28.2828 15 0 0 0 c 0 0 0 0 14 8 2 0 0 0 0 5.05051 15 0 0 0 g 0 0 0 0 14 8 2 0 0 0 0 5.05051 11 0 0 0 t 0 0 0 0 22 32 34 0 100 92 76 61.6162 59 0 0 0

M08479_2.00_rc_shift4 (M08479_2.00_rc)
; oligos_7nt_mkv5_m3 versus M08479_2.00_rc; m=20/241; ncol2=9; w=-1; offset=-1; strand=R; shift=4; score=0.598513; ----awwATTTwt--- ; cor=; Ncor= a 0 0 0 0 50 52 62 100 0 8 24 29 15 0 0 0 c 0 0 0 0 14 8 2 0 0 0 0 5 15 0 0 0 g 0 0 0 0 14 8 2 0 0 0 0 5 11 0 0 0 t 0 0 0 0 22 32 34 0 100 92 76 61 59 0 0 0

M08149_2.00_rc_shift3 (BORCS8-MEF2B,MEF2C_rc)
; oligos_7nt_mkv5_m3 versus M08149_2.00_rc (BORCS8-MEF2B,MEF2C_rc); m=21/241; ncol2=15; w=-2; offset=-2; strand=R; shift=3; score=0.592283; ---wkCTATTTTTrgm ; cor=; Ncor= a 0 0 0 28.2481 11.3173 1.31281 0 94.6582 3.16885 3.44047 0.67904 10.412 11.9058 55.4097 15.2558 34.4047 c 0 0 0 5.70394 6.69986 75.6451 1.44862 0 0.181077 0.0905387 3.93843 10.9099 3.34993 0 3.53101 37.2114 g 0 0 0 20.3712 37.8452 5.43232 0 2.8067 0 0 0 1.44862 11.589 44.5903 63.9203 8.87279 t 0 0 0 45.6768 44.1376 17.6098 98.5514 2.53508 96.6501 96.469 95.3825 77.2295 73.1553 0 17.2929 19.5111

M10935_2.00_rc_shift1 (BORCS8-MEF2B,MEF2A_rc)
; oligos_7nt_mkv5_m3 versus M10935_2.00_rc (BORCS8-MEF2B,MEF2A_rc); m=22/241; ncol2=16; w=-4; offset=-4; strand=R; shift=1; score=0.586438; -rGrGTTATTTTTAGA ; cor=; Ncor= a 0 60 20 60 0 0 0 100 0 0 0 0 0 100 20 80 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 g 0 40 80 40 100 0 0 0 0 0 0 0 0 0 80 0 t 0 0 0 0 0 100 100 0 100 100 100 100 100 0 0 0

M10576_2.00_rc_shift4 (M10576_2.00_rc)
; oligos_7nt_mkv5_m3 versus M10576_2.00_rc; m=23/241; ncol2=14; w=-1; offset=-1; strand=R; shift=4; score=0.584315; ----yswwTGTTTATw ; cor=; Ncor= a 0 0 0 0 16.6667 16.6667 33.3333 50 0 16.6667 0 0 0 100 0 66.6667 c 0 0 0 0 33.3333 33.3333 16.6667 16.6667 0 0 0 0 0 0 16.6667 0 g 0 0 0 0 0 33.3333 16.6667 0 0 83.3333 0 0 0 0 0 0 t 0 0 0 0 50 16.6667 33.3333 33.3333 100 0 100 100 100 0 83.3333 33.3333

M09253_2.00_rc_shift2 (BORCS8-MEF2B_rc)
; oligos_7nt_mkv5_m3 versus M09253_2.00_rc (BORCS8-MEF2B_rc); m=24/241; ncol2=15; w=-3; offset=-3; strand=R; shift=2; score=0.582072; --ktkCTATTTTTrgm ; cor=; Ncor= a 0 0 17.4242 22.3485 10.9848 2.27273 0 91.2879 13.2576 10.6061 3.0303 16.2879 10.9848 57.9545 15.5303 30.303 c 0 0 14.0152 10.6061 7.57576 76.8939 5.30303 0.378788 1.89394 4.16667 4.54545 6.81818 5.30303 0 2.27273 44.697 g 0 0 34.4697 24.6212 36.7424 5.68182 1.13636 1.51515 0.757576 0 0.378788 2.65152 8.33333 40.5303 65.1515 12.1212 t 0 0 34.0909 42.4242 44.697 15.1515 93.5606 6.81818 84.0909 85.2273 92.0455 74.2424 75.3788 1.51515 17.0455 12.8788

M07979_2.00_rc_shift3 (BORCS8-MEF2B,MEF2A_rc)
; oligos_7nt_mkv5_m3 versus M07979_2.00_rc (BORCS8-MEF2B,MEF2A_rc); m=25/241; ncol2=15; w=-2; offset=-2; strand=R; shift=3; score=0.580938; ---dkCTATTTTTrgm ; cor=; Ncor= a 0 0 0 27.9736 13.8767 3.5242 0 96.696 7.489 8.8106 1.7621 16.0793 13.4361 49.3392 15.1982 35.2423 c 0 0 0 7.04849 9.03079 70.2644 4.185 0 0 0.2203 4.4053 11.4537 2.4229 0 5.7269 38.5463 g 0 0 0 26.2115 35.4626 5.28631 0 0 0 0.4405 0 1.9824 12.9956 50.6608 64.0969 10.1322 t 0 0 0 38.7665 41.63 20.9251 95.815 3.304 92.511 90.5286 93.8326 70.4846 71.1454 0 14.978 16.0793

M01105_2.00_rc_shift7 (M01105_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01105_2.00_rc; m=26/241; ncol2=9; w=0; offset=2; strand=R; shift=7; score=0.579301; -------wwwwwyttw ; cor=; Ncor= a 0 0 0 0 0 0 0 46.6117 38.6247 26.005 27.5772 37.0206 24.1521 22.7241 21.5916 26.6444 c 0 0 0 0 0 0 0 10.6106 5.95298 4.47402 14.9841 15.0515 25.3904 19.3642 21.5916 18.5892 g 0 0 0 0 0 0 0 9.60085 4.82539 9.28396 0.213737 17.3133 10.6374 21.1878 23.625 17.3324 t 0 0 0 0 0 0 0 33.1768 50.597 60.2371 57.2249 30.6146 39.8201 36.7239 33.1918 37.434

M07980_2.00_rc_shift3 (BORCS8-MEF2B,MEF2C_rc)
; oligos_7nt_mkv5_m3 versus M07980_2.00_rc (BORCS8-MEF2B,MEF2C_rc); m=27/241; ncol2=15; w=-2; offset=-2; strand=R; shift=3; score=0.570556; ---wkCTATTTTTrgm ; cor=; Ncor= a 0 0 0 30.9426 14.1393 2.8689 0 95.9017 10.041 10.2459 2.0492 13.5246 12.7049 46.5164 15.9836 35.041 c 0 0 0 7.1721 8.6066 74.5901 6.1475 0.4098 1.0246 0.2049 4.918 12.9098 3.6885 0.4098 4.918 38.7295 g 0 0 0 23.5656 39.1393 5.32789 0 0 0 0.2049 0 1.6393 14.5492 53.0738 64.7541 12.2951 t 0 0 0 38.3197 38.1148 17.2131 93.8525 3.6885 88.9344 89.3443 93.0328 71.9263 69.0574 0 14.3443 13.9344

M01679_2.00_rc_shift5 (M01679_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01679_2.00_rc; m=28/241; ncol2=8; w=0; offset=0; strand=R; shift=5; score=0.566835; -----ATwTwTWW--- ; cor=; Ncor= a 0 0 0 0 0 93.6642 10.8261 67.5216 13.5259 35.1242 24.3251 27.7747 27.5826 0 0 0 c 0 0 0 0 0 0.031211 0.0269978 0.0269978 0.0269978 0.0269978 0.0269978 0.0277469 0.0344353 0 0 0 g 0 0 0 0 0 0.031211 0.0269978 0.0269978 0.0269978 0.0269978 0.0269978 0.0277469 0.0344353 0 0 0 t 0 0 0 0 0 6.27341 89.1199 32.4244 86.4201 64.8218 75.621 72.1698 72.3485 0 0 0

M09433_2.00_rc_shift7 (TBPL2_rc)
; oligos_7nt_mkv5_m3 versus M09433_2.00_rc (TBPL2_rc); m=29/241; ncol2=10; w=0; offset=2; strand=R; shift=7; score=0.565895; -------syTTTTATA ; cor=; Ncor= a 0 0 0 0 0 0 0 8.6 3.6 16 0.4 12 2 81.8 19.2 70.4 c 0 0 0 0 0 0 0 43 53.8 7.2 5 1 3.6 10.2 2.4 4.8 g 0 0 0 0 0 0 0 37 1.8 0.6 0 1.8 3 4.4 1.6 11.4 t 0 0 0 0 0 0 0 11.4 40.8 76.2 94.6 85.2 91.4 3.6 76.8 13.4

M10804_2.00_rc_shift4 (NANOGP8,NKX1-1,NKX1-2_rc)
; oligos_7nt_mkv5_m3 versus M10804_2.00_rc (NANOGP8,NKX1-1,NKX1-2_rc); m=30/241; ncol2=14; w=-1; offset=-1; strand=R; shift=4; score=0.56446; ----rywwTrTTTAyw ; cor=; Ncor= a 0 0 0 0 33.3333 16.6667 50 33.3333 0 66.6667 0 0 0 100 0 50 c 0 0 0 0 16.6667 50 16.6667 0 0 0 0 0 0 0 66.6667 0 g 0 0 0 0 50 0 0 16.6667 0 33.3333 0 0 0 0 0 16.6667 t 0 0 0 0 0 33.3333 33.3333 50 100 0 100 100 100 0 33.3333 33.3333

M06203_2.00_rc_shift5 (FOXP4_rc)
; oligos_7nt_mkv5_m3 versus M06203_2.00_rc (FOXP4_rc); m=31/241; ncol2=15; w=0; offset=0; strand=R; shift=5; score=0.56264; -----kswTTTTTTyt ; cor=; Ncor= a 0 0 0 0 0 16.9406 15.5729 44.4812 0 0 0 0 0.441501 2.98013 12.9139 21.7439 c 0 0 0 0 0 15.4235 34.2603 3.31126 0.331126 0 0.883002 0 0 0.993377 31.7881 15.011 g 0 0 0 0 0 38.4324 37.3749 7.28477 0.993377 0 0 0 0 0 5.96026 21.0817 t 0 0 0 0 0 29.2035 12.792 44.9227 98.6755 100 99.117 100 99.5585 96.0265 49.3377 42.1634

M07299_2.00_rc_shift2 (LIN54_rc)
; oligos_7nt_mkv5_m3 versus M07299_2.00_rc (LIN54_rc); m=32/241; ncol2=15; w=-3; offset=-3; strand=R; shift=2; score=0.55767; --TTTRAATTTtwAww ; cor=; Ncor= a 0 0 0 0 1.8939 73.8636 100 95.8333 7.5758 5.6818 0.3788 14.0152 47.3485 73.8636 65.9091 49.2424 c 0 0 0 0 17.0455 0 0 1.1364 0 6.0606 13.2576 15.5303 5.6818 3.4091 3.0303 10.6061 g 0 0 0 0 0 26.1364 0 3.0303 0 0.3788 0 9.8485 14.3939 2.2727 4.1667 3.4091 t 0 0 100 100 81.0606 0 0 0 92.4242 87.8788 86.3636 60.6061 32.5758 20.4545 26.8939 36.7424

M01984_2.00_rc_shift6 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M01984_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc); m=33/241; ncol2=12; w=0; offset=1; strand=R; shift=6; score=0.557614; ------twTGTTTAya ; cor=; Ncor= a 0 0 0 0 0 0 20.2173 31.9997 4.83711 11.8195 0.0220583 0.0220583 0.0220583 81.6007 4.80478 52.8646 c 0 0 0 0 0 0 20.2173 12.7443 4.83711 2.50251 0.0220583 0.0220583 0.0220583 0.0220583 47.1109 22.5799 g 0 0 0 0 0 0 20.2173 23.3808 4.83711 83.1754 0.0220583 0.0220583 10.2206 9.03814 4.80478 12.2778 t 0 0 0 0 0 0 39.3482 31.8752 85.4887 2.50251 99.9338 99.9338 89.7353 9.3391 43.2796 12.2778

M01103_2.00_rc_shift6 (M01103_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01103_2.00_rc; m=34/241; ncol2=12; w=0; offset=1; strand=R; shift=6; score=0.555073; ------wATTwATwTw ; cor=; Ncor= a 0 0 0 0 0 0 37.448 79.0879 2.1966 2.1966 56.8025 82.2016 19.2951 66.5982 9.97341 26.7864 c 0 0 0 0 0 0 15.0363 6.97071 2.1966 2.1966 0.00975078 0.00975078 0.00975078 0.00975078 9.97341 18.039 g 0 0 0 0 0 0 15.0363 6.97071 2.1966 2.1966 0.00975078 0.00975078 0.00975078 0.00975078 9.97341 18.039 t 0 0 0 0 0 0 32.4794 6.97071 93.4102 93.4102 43.178 17.7789 80.6854 33.3823 70.0798 37.1355

M07298_2.00_rc_shift1 (LIN54_rc)
; oligos_7nt_mkv5_m3 versus M07298_2.00_rc (LIN54_rc); m=35/241; ncol2=15; w=-4; offset=-4; strand=R; shift=1; score=0.547132; -wTTTRAATTTTwwAw ; cor=; Ncor= a 0 52.6667 0 0 0 71.8333 100 100 15.5 10.8333 2.3333 5.8333 44.3333 64.8333 80.5 60.6667 c 0 0 0.1667 0 19.6667 0 0 0 3.8333 11 7.1667 11.6667 7.6667 1.1667 1 4.5 g 0 2.6667 0 7.5 0 28.1667 0 0 0 0.5 0 9 11.5 6.1667 2.6667 2.8333 t 0 44.6667 99.8333 92.5 80.3333 0 0 0 80.6667 77.6667 90.5 73.5 36.5 27.8333 15.8333 32

M06197_2.00_rc_shift8 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M06197_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc); m=36/241; ncol2=8; w=0; offset=3; strand=R; shift=8; score=0.546024; --------TGTTTaba ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 15 0 0 0 65 10 65 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 20 g 0 0 0 0 0 0 0 0 0 85 0 5 0 15 25 0 t 0 0 0 0 0 0 0 0 100 0 100 95 100 20 35 15

M07295_2.00_rc_shift1 (LIN54_rc)
; oligos_7nt_mkv5_m3 versus M07295_2.00_rc (LIN54_rc); m=37/241; ncol2=15; w=-4; offset=-4; strand=R; shift=1; score=0.542949; -wTTTrAATwTTtwAW ; cor=; Ncor= a 0 39.531 0 0 0 67.5042 100 100 15.2429 25.4606 1.34 8.5427 23.2831 38.861 71.1893 68.5092 c 0 0 0 0 13.7353 0 0 0 2.6801 16.0804 5.0251 3.0151 7.5377 2.6801 1.34 3.1826 g 0 5.5276 0 14.2379 0 32.4958 0 0 0 2.1776 0 10.8878 8.2077 18.7605 3.3501 2.0101 t 0 54.9414 100 85.7621 86.2647 0 0 0 82.0771 56.2814 93.6348 77.5544 60.9715 39.6985 24.1206 26.2982

M11390_2.00_rc_shift6 (TBP,TBPL2_rc)
; oligos_7nt_mkv5_m3 versus M11390_2.00_rc (TBP,TBPL2_rc); m=38/241; ncol2=8; w=0; offset=1; strand=R; shift=6; score=0.541721; ------wATTTATa-- ; cor=; Ncor= a 0 0 0 0 0 0 38.2979 74.4681 4.25532 0 0 100 14.8936 65.9574 0 0 c 0 0 0 0 0 0 8.51064 12.766 8.51064 0 0 0 12.766 19.1489 0 0 g 0 0 0 0 0 0 8.51064 6.38298 2.12766 0 0 0 0 8.51064 0 0 t 0 0 0 0 0 0 44.6809 6.38298 85.1064 100 100 0 72.3404 6.38298 0 0

M00829_2.00_rc_shift6 (SOX1_rc)
; oligos_7nt_mkv5_m3 versus M00829_2.00_rc (SOX1_rc); m=39/241; ncol2=8; w=0; offset=1; strand=R; shift=6; score=0.538325; ------yATTGTTw-- ; cor=; Ncor= a 0 0 0 0 0 0 20 91.4286 2.85714 2.85714 5.71429 2.85714 12.9032 43.4783 0 0 c 0 0 0 0 0 0 36 2.85714 2.85714 2.85714 2.85714 2.85714 3.22581 13.0435 0 0 g 0 0 0 0 0 0 12 2.85714 2.85714 2.85714 88.5714 2.85714 3.22581 17.3913 0 0 t 0 0 0 0 0 0 32 2.85714 91.4286 91.4286 2.85714 91.4286 80.6452 26.087 0 0

M08236_2.00_shift5 (MZF1)
; oligos_7nt_mkv5_m3 versus M08236_2.00 (MZF1); m=40/241; ncol2=7; w=0; offset=0; strand=D; shift=5; score=0.53753; -----CCATTTT---- ; cor=; Ncor= a 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 c 0 0 0 0 0 75.4902 100 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 24.5098 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 100 100 100 100 0 0 0 0

M01108_2.00_rc_shift7 (M01108_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01108_2.00_rc; m=41/241; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.537032; -------wwTwwttw- ; cor=; Ncor= a 0 0 0 0 0 0 0 58.5557 42.6266 10.0325 37.2223 41.4883 24.5293 17.1695 25.169 0 c 0 0 0 0 0 0 0 6.68575 3.82852 1.85119 1.98756 4.83273 11.0217 18.4144 19.9976 0 g 0 0 0 0 0 0 0 6.82081 1.48065 2.84576 2.99489 3.50928 5.31146 10.731 12.4985 0 t 0 0 0 0 0 0 0 27.9377 52.0642 85.2706 57.7953 50.1697 59.1376 53.6851 42.3349 0

M00300_2.00_shift9 (HOXD13)
; oligos_7nt_mkv5_m3 versus M00300_2.00 (HOXD13); m=42/241; ncol2=8; w=0; offset=4; strand=D; shift=9; score=0.534973; ---------tTTTATt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 20.7937 5.56096 5.19995 14.2885 97.3838 10.4613 18.2501 c 0 0 0 0 0 0 0 0 0 7.92755 1.39545 0.00649182 0.655674 0.00649182 16.3421 0.00729714 g 0 0 0 0 0 0 0 0 0 11.8864 1.39545 0.00649182 0.00649182 0.655674 0.659958 24.8176 t 0 0 0 0 0 0 0 0 0 59.3923 91.6482 94.7871 85.0493 1.95404 72.5366 56.925

M10571_2.00_rc_shift3 (FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M10571_2.00_rc (FOXS1_rc); m=43/241; ncol2=16; w=-2; offset=-2; strand=R; shift=3; score=0.532856; ---cmwwmTATTTAyt ; cor=; Ncor= a 0 0 0 8.33333 35.7143 26.6667 26.6667 60 0 80 0 0 0 100 0 8.33333 c 0 0 0 50 35.7143 20 13.3333 26.6667 0 0 0 0 0 0 33.3333 16.6667 g 0 0 0 16.6667 14.2857 20 20 6.66667 0 20 0 0 0 0 0 8.33333 t 0 0 0 25 14.2857 33.3333 40 6.66667 100 0 100 100 100 0 66.6667 66.6667

M01106_2.00_rc_shift7 (M01106_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01106_2.00_rc; m=44/241; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.532322; -------wwTwwwtt- ; cor=; Ncor= a 0 0 0 0 0 0 0 59.6983 38.2408 16.542 33.4392 37.6733 26.5279 14.1412 20.8888 0 c 0 0 0 0 0 0 0 0.203784 2.78404 3.37333 3.09481 6.95145 11.4524 16.7616 21.525 0 g 0 0 0 0 0 0 0 2.03258 0.774067 3.69101 3.7424 4.01064 5.86027 14.0005 9.20009 0 t 0 0 0 0 0 0 0 38.0653 58.2011 76.3937 59.7236 51.3647 56.1595 55.0968 48.3861 0

M09404_2.00_rc_shift6 (SOX1_rc)
; oligos_7nt_mkv5_m3 versus M09404_2.00_rc (SOX1_rc); m=45/241; ncol2=8; w=0; offset=1; strand=R; shift=6; score=0.531856; ------yATTGTTw-- ; cor=; Ncor= a 0 0 0 0 0 0 13.1209 87.4346 0 1.13089 4.38607 1.13089 5.51695 37.7783 0 0 c 0 0 0 0 0 0 31.2032 0 3.39266 1.13089 3.39266 5.26565 4.26041 15.6085 0 0 g 0 0 0 0 0 0 16.0109 5.78009 6.52219 0 89.9595 0 2.13612 13.0836 0 0 t 0 0 0 0 0 0 39.665 6.78532 90.0852 97.7382 2.26177 93.6035 88.0865 33.5297 0 0

M09390_2.00_rc_shift6 (SOX1,SOX5_rc)
; oligos_7nt_mkv5_m3 versus M09390_2.00_rc (SOX1,SOX5_rc); m=46/241; ncol2=8; w=0; offset=1; strand=R; shift=6; score=0.531856; ------yATTGTTw-- ; cor=; Ncor= a 0 0 0 0 0 0 13.1209 87.4346 0 1.13089 4.38607 1.13089 5.51695 37.7783 0 0 c 0 0 0 0 0 0 31.2032 0 3.39266 1.13089 3.39266 5.26565 4.26041 15.6085 0 0 g 0 0 0 0 0 0 16.0109 5.78009 6.52219 0 89.9595 0 2.13612 13.0836 0 0 t 0 0 0 0 0 0 39.665 6.78532 90.0852 97.7382 2.26177 93.6035 88.0865 33.5297 0 0

M02081_2.00_shift9 (M02081_2.00)
; oligos_7nt_mkv5_m3 versus M02081_2.00; m=47/241; ncol2=8; w=0; offset=4; strand=D; shift=9; score=0.530889; ---------wTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 25.9612 4.8667 5.10061 12.1052 96.797 13.3788 18.4416 c 0 0 0 0 0 0 0 0 0 4.81546 1.39545 1.27993 0.643148 0.0063678 9.55807 0.00709019 g 0 0 0 0 0 0 0 0 0 13.466 0.701194 0.0063678 0.0063678 1.27993 1.27993 25.5318 t 0 0 0 0 0 0 0 0 0 55.7574 93.0367 93.6131 87.2453 1.91671 75.7832 56.0196

M11389_2.00_rc_shift8 (TBP,TBPL2_rc)
; oligos_7nt_mkv5_m3 versus M11389_2.00_rc (TBP,TBPL2_rc); m=48/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.530213; --------yTTTTAWA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 14.7455 0 0 7.18563 0 100 27.0007 72.6253 c 0 0 0 0 0 0 0 0 45.7335 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 10.1796 0 0 0 0 0 0 24.9065 t 0 0 0 0 0 0 0 0 29.3413 100 100 92.8144 100 0 72.9993 2.46821

M03046_2.00_rc_shift7 (FOXI2,FOXI3,FOXJ3_rc)
; oligos_7nt_mkv5_m3 versus M03046_2.00_rc (FOXI2,FOXI3,FOXJ3_rc); m=49/241; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.530118; -------TTgTTTAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 12.7764 0 7.05374 5.32915 4.6549 2.29794 70.5341 0 0 c 0 0 0 0 0 0 0 7.55528 0.605536 14.3954 4.62382 2.16693 3.09033 11.6022 54.6562 0 g 0 0 0 0 0 0 0 9.09091 0 55.1344 0 0.963082 3.56577 4.91099 0 0 t 0 0 0 0 0 0 0 70.5774 99.3945 23.4165 90.047 92.2151 91.046 12.9527 45.3438 0

M09672_2.00_rc_shift7 (HOXC5,HOXC6_rc)
; oligos_7nt_mkv5_m3 versus M09672_2.00_rc (HOXC5,HOXC6_rc); m=50/241; ncol2=10; w=0; offset=2; strand=R; shift=7; score=0.528909; -------kgTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 14.881 17.2619 19.6429 2.97619 0 9.52381 100 0 7.14286 c 0 0 0 0 0 0 0 10.119 12.5 2.97619 0.595238 0 7.14286 0 14.2857 0 g 0 0 0 0 0 0 0 31.5476 50.5952 5.35714 7.7381 0 0 0 0 61.9048 t 0 0 0 0 0 0 0 43.4524 19.6429 72.0238 88.6905 100 83.3333 0 85.7143 30.9524

M03100_2.00_shift8 (HOXA13)
; oligos_7nt_mkv5_m3 versus M03100_2.00 (HOXA13); m=51/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.526504; --------ktTTTATt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.4332 8.83117 0 6.08365 5.43478 100 11.1511 11.6531 c 0 0 0 0 0 0 0 0 9.31174 11.4286 0 0 1.81159 0 0 2.43902 g 0 0 0 0 0 0 0 0 29.1498 15.5844 1.2 0 3.26087 0 0 18.9702 t 0 0 0 0 0 0 0 0 42.1053 64.1558 98.8 93.9163 89.4928 0 88.8489 66.9377

M01992_2.00_rc_shift7 (FOXI3_rc)
; oligos_7nt_mkv5_m3 versus M01992_2.00_rc (FOXI3_rc); m=52/241; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.526153; -------wTGTTTAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 29.9801 0.0586854 11.7958 0.0586854 0.0586854 0.0586854 93.9554 0.0712251 0 c 0 0 0 0 0 0 0 0.0996016 0.0586854 0.0586854 0.0586854 0.0586854 0.0586854 0.0586854 35.6838 0 g 0 0 0 0 0 0 0 20.0199 0.0586854 88.0869 0.0586854 0.0586854 5.92723 0.0586854 7.19373 0 t 0 0 0 0 0 0 0 49.9004 99.8239 0.0586854 99.8239 99.8239 93.9554 5.92723 57.0513 0

M03253_2.00_shift8 (HOXC6)
; oligos_7nt_mkv5_m3 versus M03253_2.00 (HOXC6); m=53/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.524768; --------tTTTTATt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.5912 9.97145 3.14363 1.1396 24.6171 96.2018 0.676773 4.70767 c 0 0 0 0 0 0 0 0 10.4353 6.45728 1.54472 0 1.27623 0.748544 2.5176 6.83371 g 0 0 0 0 0 0 0 0 20.5823 7.35779 1.27371 0 0.311968 0 2.86952 22.5892 t 0 0 0 0 0 0 0 0 47.3912 76.2135 94.0379 98.8604 73.7947 3.04963 93.9361 65.8694

M03141_2.00_shift8 (HOXD13)
; oligos_7nt_mkv5_m3 versus M03141_2.00 (HOXD13); m=54/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.523323; --------kTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 23.9826 6.56506 0 0.57554 13.7845 99.8549 3.89785 8.32595 c 0 0 0 0 0 0 0 0 10.6105 3.98593 0 0 0 0 3.62903 0 g 0 0 0 0 0 0 0 0 30.0872 8.7925 0.145138 0.431655 0 0.145138 0 30.7352 t 0 0 0 0 0 0 0 0 35.3198 80.6565 99.8549 98.9928 86.2155 0 92.4731 60.9389

M01685_2.00_rc_shift7 (M01685_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01685_2.00_rc; m=55/241; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.522307; -------wwWwhyyk- ; cor=; Ncor= a 0 0 0 0 0 0 0 51.7606 25.5906 27.9818 33.4131 28.212 21.7317 23.1669 18.858 0 c 0 0 0 0 0 0 0 7.66473 13.9047 0.170598 17.6185 25.0218 27.3515 26.3831 22.5771 0 g 0 0 0 0 0 0 0 13.5533 0.0299635 0.214715 8.15758 13.3264 13.996 24.8467 28.9896 0 t 0 0 0 0 0 0 0 27.0214 60.4747 71.6329 40.8108 33.4398 36.9207 25.6034 29.5752 0

M03129_2.00_shift8 (HOXC13)
; oligos_7nt_mkv5_m3 versus M03129_2.00 (HOXC13); m=56/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.521043; --------kTTTTATT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 23.3071 8.55346 1.07692 1.5456 10.4895 99.064 2.88754 14.4105 c 0 0 0 0 0 0 0 0 12.7559 5.15723 0 0 0.699301 0.312012 0.607903 0.10917 g 0 0 0 0 0 0 0 0 27.874 6.41509 1.23077 0.309119 0 0.312012 0 16.1572 t 0 0 0 0 0 0 0 0 36.063 79.8742 97.6923 98.1453 88.8112 0.312012 96.5046 69.3231

M01692_2.00_rc_shift7 (M01692_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01692_2.00_rc; m=57/241; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.520943; -------aYtwtyhk- ; cor=; Ncor= a 0 0 0 0 0 0 0 45.4628 0.0420287 23.0937 27.8201 24.4532 23.1593 27.774 19.8875 0 c 0 0 0 0 0 0 0 10.0432 29.0959 15.6357 21.2373 23.4943 25.0882 26.4194 21.979 0 g 0 0 0 0 0 0 0 22.8031 0.00976059 7.23955 15.5764 19.0441 19.5387 20.168 26.3137 0 t 0 0 0 0 0 0 0 21.6909 70.8523 54.031 35.3662 33.0083 32.2138 25.6386 31.8198 0

M07300_2.00_rc_shift1 (LIN54_rc)
; oligos_7nt_mkv5_m3 versus M07300_2.00_rc (LIN54_rc); m=58/241; ncol2=15; w=-4; offset=-4; strand=R; shift=1; score=0.518815; -wTTYrAATTTtrAAw ; cor=; Ncor= a 0 53.0885 0 0 0 46.9115 100 96.995 11.8531 5.0083 1.3356 11.3523 55.2588 82.9716 68.9482 38.7312 c 0 1.6694 0 0 27.212 0 0 1.1686 2.3372 0.1669 4.3406 17.8631 6.8447 0.1669 4.6745 10.1836 g 0 15.5259 0 0 0.1669 53.0885 0 0.1669 0 2.3372 1.0017 22.0367 28.8815 6.8447 3.8397 8.1803 t 0 29.7162 100 100 72.621 0 0 1.6694 85.8097 92.4875 93.3222 48.7479 9.015 10.0167 22.5376 42.9048

M03175_2.00_shift8 (HOXB13)
; oligos_7nt_mkv5_m3 versus M03175_2.00 (HOXB13); m=59/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.516716; --------kTTTTATt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.1075 8.97503 0.625652 0.607577 9.70316 99.7489 3.53141 12.077 c 0 0 0 0 0 0 0 0 6.90399 4.37045 0.0347584 0 0.829876 0 1.29032 0.278164 g 0 0 0 0 0 0 0 0 36.4617 14.308 2.6764 0 0.702202 0.251076 0.747029 23.1803 t 0 0 0 0 0 0 0 0 35.5268 72.3465 96.6632 99.3924 88.7648 0 94.4312 64.4645

M03015_2.00_rc_shift7 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M03015_2.00_rc (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1_rc); m=60/241; ncol2=11; w=0; offset=2; strand=R; shift=7; score=0.516143; -------wTrTTKAYw ; cor=; Ncor= a 0 0 0 0 0 0 0 55.72 0.961689 51.7015 0.595808 0.305564 0.242522 80.2927 0.270184 46.2324 c 0 0 0 0 0 0 0 5.23305 2.26311 0.878735 0.75008 0 0.113177 1.69366 72.2134 10.5677 g 0 0 0 0 0 0 0 7.36504 0.141117 46.77 0.297904 0.578964 28.9518 7.17419 1.78004 8.76129 t 0 0 0 0 0 0 0 31.682 96.6341 0.649731 98.3562 99.1155 70.6925 10.8394 25.7364 34.4387

M09251_2.00_rc_shift1 (BORCS8-MEF2B,MEF2B_rc)
; oligos_7nt_mkv5_m3 versus M09251_2.00_rc (BORCS8-MEF2B,MEF2B_rc); m=61/241; ncol2=14; w=-4; offset=-4; strand=R; shift=1; score=0.514974; -rkkkCTATTTTtrG- ; cor=; Ncor= a 0 25.4 19.4 20.4 16.8 4.8 0.2 86.2 10.6 7.6 3.6 13.4 17 47.2 12.2 0 c 0 11.8 11 3.6 10.4 77.2 8.8 2.6 2 0.6 4.8 11.8 5.6 0 5.2 0 g 0 41.4 25.2 27.2 37.4 4 0.2 3.2 0.6 0.4 1.4 4.8 14 48.8 69.6 0 t 0 21.4 44.4 48.8 35.4 14 90.8 8 86.8 91.4 90.2 70 63.4 4 13 0

M02681_2.00_rc_shift7 (FOXD1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M02681_2.00_rc (FOXD1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc); m=62/241; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.514103; -------wTGTTTAC- ; cor=; Ncor= a 0 0 0 0 0 0 0 40 0 5 0 0 0 100 5 0 c 0 0 0 0 0 0 0 15 0 0 5 0 0 0 85 0 g 0 0 0 0 0 0 0 10 0 90 5 0 5 0 5 0 t 0 0 0 0 0 0 0 35 100 5 90 100 95 0 5 0

M03048_2.00_rc_shift2 (FOXI2,FOXI3,FOXJ3_rc)
; oligos_7nt_mkv5_m3 versus M03048_2.00_rc (FOXI2,FOXI3,FOXJ3_rc); m=63/241; ncol2=13; w=-3; offset=-3; strand=R; shift=2; score=0.512829; --TGTTTATGTTTAC- ; cor=; Ncor= a 0 0 0 4.02576 0 0.21645 3.34646 77.87 2.59434 18.0277 1.37615 6.59341 5.66893 85.4286 0.170648 0 c 0 0 3.24826 3.05958 7.34967 1.94805 1.9685 2.90456 0 1.23267 0 1.97802 0.680272 2.85714 77.4744 0 g 0 0 0 91.7874 0.668151 8.44156 18.8976 2.90456 0 79.9692 2.75229 0 0.453515 8 0.170648 0 t 0 0 96.7517 1.12721 91.9822 89.3939 75.7874 16.3209 97.4057 0.770416 95.8716 91.4286 93.1973 3.71429 22.1843 0

M03018_2.00_rc_shift2 (FOXI2,FOXI3,FOXJ2_rc)
; oligos_7nt_mkv5_m3 versus M03018_2.00_rc (FOXI2,FOXI3,FOXJ2_rc); m=64/241; ncol2=13; w=-3; offset=-3; strand=R; shift=2; score=0.511869; --TGTTkwTGTTTAC- ; cor=; Ncor= a 0 0 2.25543 9.80022 1.20964 11.2156 13.2479 62.844 0.0878049 15.9307 1.03981 5.39481 6.30264 89.007 0.373669 0 c 0 0 3.26396 1.55192 3.37769 1.83848 0.930674 1.07066 3.19024 0.538721 0.564468 1.2227 0.425729 0.786559 77.4055 0 g 0 0 2.20959 76.747 3.05201 6.62357 28.471 1.88754 0.253659 82.1356 0.87146 2.02539 4.90514 5.64435 1.7251 0 t 0 0 92.271 11.9009 92.3607 80.3224 57.3504 34.1978 96.4683 1.3949 97.5243 91.3571 88.3665 4.56204 20.4957 0

M01974_2.00_rc_shift7 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI2,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M01974_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI2,FOXI3,FOXS1_rc); m=65/241; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.511828; -------tTGTTTAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 21.7448 0.0285388 2.88242 0.0285388 5.7363 0.0285388 97.0605 4.20133 0 c 0 0 0 0 0 0 0 13.0642 0.0285388 0.0285388 0.0285388 0.0285388 0.0285388 0.0285388 54.1181 0 g 0 0 0 0 0 0 0 21.7448 0.0285388 91.3527 0.0285388 0.0285388 17.1518 0.0285388 0.0415973 0 t 0 0 0 0 0 0 0 43.4462 99.9144 5.7363 99.9144 94.2066 82.7911 2.88242 41.6389 0

M01978_2.00_rc_shift7 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXG1,FOXI2,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M01978_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXG1,FOXI2,FOXI3,FOXS1_rc); m=66/241; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.511734; -------wTGTTTAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 33.2781 0.110619 0.110619 0.110619 0.110619 0.110619 99.6681 0.124378 0 c 0 0 0 0 0 0 0 0.165563 0.110619 0.110619 0.110619 0.110619 0.110619 0.110619 62.3134 0 g 0 0 0 0 0 0 0 16.7219 0.110619 99.6681 0.110619 0.110619 0.110619 0.110619 0.124378 0 t 0 0 0 0 0 0 0 49.8344 99.6681 0.110619 99.6681 99.6681 99.6681 0.110619 37.4378 0

M03739_2.00_rc_shift6 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI2,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M03739_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI2,FOXI3,FOXS1_rc); m=67/241; ncol2=13; w=0; offset=1; strand=R; shift=6; score= 0.5116; ------wwTGTTTAyw ; cor=; Ncor= a 0 0 0 0 0 0 45.8798 31.6376 4.55639 17.4642 0.398974 1.48632 0.416107 79.6598 1.16311 26.9331 c 0 0 0 0 0 0 9.06453 8.80799 2.15126 0.457424 0.555714 0 0.161074 0.632039 47.15 11.959 g 0 0 0 0 0 0 10.4689 11.587 0.668092 81.3042 0.270732 2.22253 6.37584 8.64169 1.84329 12.1466 t 0 0 0 0 0 0 34.5868 47.9674 92.6243 0.774103 98.7746 96.2912 93.047 11.0664 49.8436 48.9613

M01687_2.00_rc_shift4 (M01687_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01687_2.00_rc; m=68/241; ncol2=8; w=-1; offset=-1; strand=R; shift=4; score=0.511199; ----ATTAWTTT---- ; cor=; Ncor= a 0 0 0 0 77.6997 20.5934 16.6759 83.2686 30.5494 16.6759 11.7803 4.03355 0 0 0 0 c 0 0 0 0 0.0369822 0.0293772 0.0277469 0.0277469 0.0277469 0.0277469 0.0293772 12.0208 0 0 0 0 g 0 0 0 0 3.73521 2.9671 0.0277469 0.0277469 0.0277469 0.0277469 0.0293772 0.0399361 0 0 0 0 t 0 0 0 0 18.5281 76.4101 83.2686 16.6759 69.3951 83.2686 88.161 83.9058 0 0 0 0

M01677_2.00_rc_shift7 (M01677_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01677_2.00_rc; m=69/241; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.511098; -------dYtwtymk- ; cor=; Ncor= a 0 0 0 0 0 0 0 42.6484 0.0236203 21.1901 28.4048 23.7414 22.7749 27.9056 15.6489 0 c 0 0 0 0 0 0 0 6.12874 26.6916 17.8773 21.4679 24.4645 25.1702 27.0808 19.4997 0 g 0 0 0 0 0 0 0 25.8675 0.000129006 3.33187 15.4337 17.7648 17.7371 20.2636 27.1235 0 t 0 0 0 0 0 0 0 25.3553 73.2846 57.6007 34.6936 34.0293 34.3177 24.75 37.7279 0

M03247_2.00_shift8 (M03247_2.00)
; oligos_7nt_mkv5_m3 versus M03247_2.00; m=70/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.509343; --------dtTTTATt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.2933 12.7523 1.00825 1.95531 11.3423 99.7631 4.5208 15.439 c 0 0 0 0 0 0 0 0 8.68533 5.04587 0.091659 0 2.24398 0.189484 0.271248 0 g 0 0 0 0 0 0 0 0 30.3749 17.7982 2.38313 0 0.489596 0.0473709 0 16.8221 t 0 0 0 0 0 0 0 0 34.6464 64.4037 96.517 98.0447 85.9241 0 95.208 67.7388

M01680_2.00_rc_shift4 (M01680_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01680_2.00_rc; m=71/241; ncol2=8; w=-1; offset=-1; strand=R; shift=4; score=0.506728; ----TTTATTTT---- ; cor=; Ncor= a 0 0 0 0 0.328947 0.247525 0.247525 74.505 0.247525 0.247525 0.247525 0.328947 0 0 0 0 c 0 0 0 0 0.328947 0.247525 0.247525 0.247525 0.247525 0.247525 0.247525 0.328947 0 0 0 0 g 0 0 0 0 0.328947 0.247525 0.247525 0.247525 0.247525 0.247525 0.247525 0.328947 0 0 0 0 t 0 0 0 0 99.0132 99.2574 99.2574 25 99.2574 99.2574 99.2574 99.0132 0 0 0 0

M00296_2.00_rc_shift9 (HOXD13_rc)
; oligos_7nt_mkv5_m3 versus M00296_2.00_rc (HOXD13_rc); m=72/241; ncol2=8; w=0; offset=4; strand=R; shift=9; score=0.505781; ---------wTTTATm ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 28.8872 1.52227 3.4782 18.7517 99.9792 6.25521 55.8958 c 0 0 0 0 0 0 0 0 0 7.78543 0.00757346 0.00694252 0.00694252 0.00694252 2.78395 25.1968 g 0 0 0 0 0 0 0 0 0 14.4491 0.00757346 0.00694252 0.00694252 0.00694252 0.00694252 10.2409 t 0 0 0 0 0 0 0 0 0 48.8783 98.4626 96.5079 81.2344 0.00694252 90.9539 8.66656

M08213_2.00_rc_shift4 (BORCS8-MEF2B,MEF2A_rc)
; oligos_7nt_mkv5_m3 versus M08213_2.00_rc (BORCS8-MEF2B,MEF2A_rc); m=73/241; ncol2=8; w=-1; offset=-1; strand=R; shift=4; score=0.504608; ----gcTATTTT---- ; cor=; Ncor= a 0 0 0 0 10.2353 7.41179 6 72.9412 6.8235 5.88239 4.2353 6.7059 0 0 0 0 c 0 0 0 0 7.88239 67.5293 5.4118 7.0588 4.8235 3.7647 4.5882 7.7647 0 0 0 0 g 0 0 0 0 58.9411 9.17649 0.5882 7.7647 3.6471 3.8824 2.8235 4.5882 0 0 0 0 t 0 0 0 0 22.9412 15.8824 88 12.2353 84.7059 86.4705 88.353 80.9412 0 0 0 0

M00253_2.00_rc_shift7 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M00253_2.00_rc (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1_rc); m=74/241; ncol2=11; w=0; offset=2; strand=R; shift=7; score=0.504403; -------tTrwTTATw ; cor=; Ncor= a 0 0 0 0 0 0 0 17.7023 7.41999 34.7728 31.0808 0.028741 10.5045 99.9138 0.028741 47.9225 c 0 0 0 0 0 0 0 17.7023 7.41999 5.06064 9.48884 0.028741 0.028741 0.028741 19.2366 7.32644 g 0 0 0 0 0 0 0 17.7023 7.41999 35.6583 0.028741 10.0734 0.028741 0.028741 0.028741 17.8925 t 0 0 0 0 0 0 0 46.8931 77.74 24.5082 59.4016 89.8691 89.438 0.028741 80.7059 26.8585

M06211_2.00_rc_shift9 (HOXC5,HOXC6_rc)
; oligos_7nt_mkv5_m3 versus M06211_2.00_rc (HOXC5,HOXC6_rc); m=75/241; ncol2=8; w=0; offset=4; strand=R; shift=9; score=0.504165; ---------TTTTATG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 14.2857 14.2857 0 0 100 0 0 c 0 0 0 0 0 0 0 0 0 14.2857 0 0 0 0 14.2857 14.2857 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 71.4286 t 0 0 0 0 0 0 0 0 0 71.4286 85.7143 100 100 0 85.7143 14.2857

M05104_2.00_shift8 (HOXC5,HOXC6,HOXD9)
; oligos_7nt_mkv5_m3 versus M05104_2.00 (HOXC5,HOXC6,HOXD9); m=76/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.504016; --------kTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 22.267 9.56522 0.324675 0.512629 19.5059 98.9976 0 2.53062 c 0 0 0 0 0 0 0 0 15.3853 5.4526 0 0.0745643 0 0 0 1.86619 g 0 0 0 0 0 0 0 0 30.5738 8.95937 0.732839 0 0.165688 0 1.08504 33.9785 t 0 0 0 0 0 0 0 0 31.7739 76.0228 98.9425 99.4128 80.3284 1.00241 98.915 61.6247

M10558_2.00_rc_shift4 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXL1,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M10558_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXL1,FOXS1_rc); m=77/241; ncol2=16; w=-1; offset=-1; strand=R; shift=4; score=0.501158; ----wtywTrTTTATr ; cor=; Ncor= a 0 0 0 0 34.7826 21.7391 17.3913 34.7826 0 39.1304 0 0 0 91.3043 0 30.4348 c 0 0 0 0 17.3913 21.7391 39.1304 8.69565 4.34783 0 0 0 0 0 8.69565 8.69565 g 0 0 0 0 17.3913 13.0435 13.0435 17.3913 4.34783 60.8696 0 0 4.34783 8.69565 0 43.4783 t 0 0 0 0 30.4348 43.4783 30.4348 39.1304 91.3043 0 100 100 95.6522 0 91.3043 17.3913

M03252_2.00_shift8 (HOXC6)
; oligos_7nt_mkv5_m3 versus M03252_2.00 (HOXC6); m=78/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.500407; --------wTTTWAyG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.269 14.2081 2.74463 2.71605 26.4339 99.8733 0 5.6928 c 0 0 0 0 0 0 0 0 6.34518 5.42986 0 0 0.498753 0.126743 49.905 1.28894 g 0 0 0 0 0 0 0 0 20.3046 9.04977 3.22196 0 1.24688 0 0 84.6402 t 0 0 0 0 0 0 0 0 47.0812 71.3122 94.0334 97.284 71.8204 0 50.095 8.37809

M03098_2.00_shift8 (HOXA13)
; oligos_7nt_mkv5_m3 versus M03098_2.00 (HOXA13); m=79/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.498799; --------ktTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 23.4043 13.569 2.85714 5.35714 14.3312 96.4486 4.60405 15.6317 c 0 0 0 0 0 0 0 0 8.31721 7.63968 0 1.60714 0.636943 0 0.368324 1.39186 g 0 0 0 0 0 0 0 0 36.7505 19.9544 5 0.892857 2.86624 3.5514 0 27.7302 t 0 0 0 0 0 0 0 0 31.528 58.8369 92.1429 92.1429 82.1656 0 95.0276 55.2463

M03030_2.00_shift7 (FOXB1,FOXB2)
; oligos_7nt_mkv5_m3 versus M03030_2.00 (FOXB1,FOXB2); m=80/241; ncol2=11; w=0; offset=2; strand=D; shift=7; score=0.498776; -------aTrTTKACw ; cor=; Ncor= a 0 0 0 0 0 0 0 58.5879 2.05738 65.811 3.02056 5.12441 1.0445 92.7719 1.51626 65.0509 c 0 0 0 0 0 0 0 8.12747 2.19734 1.49147 0.657251 0 1.07311 1.53241 83.6513 5.4767 g 0 0 0 0 0 0 0 8.37597 0 32.296 0.657251 2.86483 27.901 3.25468 0.660308 2.91912 t 0 0 0 0 0 0 0 24.9086 95.7453 0.401549 95.6649 92.0108 69.9814 2.44101 14.1722 26.5533

M05332_2.00_shift8 (HOXC5,HOXC6,HOXC9)
; oligos_7nt_mkv5_m3 versus M05332_2.00 (HOXC5,HOXC6,HOXC9); m=81/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.497579; --------kTTTTATK ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.4001 5.99539 0 0 19.67 99.7018 0 1.95314 c 0 0 0 0 0 0 0 0 13.7122 3.27021 0 0 0 0 0.0332226 0.729596 g 0 0 0 0 0 0 0 0 35.7461 6.19767 0 0.548652 0 0 0 29.1385 t 0 0 0 0 0 0 0 0 26.1416 84.5367 100 99.4513 80.33 0.298211 99.9668 68.1787

M03229_2.00_shift8 (HOXC10,HOXC6)
; oligos_7nt_mkv5_m3 versus M03229_2.00 (HOXC10,HOXC6); m=82/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.497268; --------wtTTwATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.6724 14.5876 5.38218 4.13724 34.4364 93.408 1.15725 1.51237 c 0 0 0 0 0 0 0 0 14.6205 13.2415 2.48756 0.782038 1.75801 0 7.1931 8.32509 g 0 0 0 0 0 0 0 0 21.2517 13.398 7.21393 0.353179 1.16339 0 6.44429 37.0883 t 0 0 0 0 0 0 0 0 38.4554 58.7729 84.9163 94.7275 62.6422 6.59204 85.2054 53.0742

M00294_2.00_rc_shift9 (HOXD13_rc)
; oligos_7nt_mkv5_m3 versus M00294_2.00_rc (HOXD13_rc); m=83/241; ncol2=8; w=0; offset=4; strand=R; shift=9; score=0.496772; ---------tTTWACr ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 21.2137 4.3225 2.58643 25.8062 99.3357 18.3024 30.3688 c 0 0 0 0 0 0 0 0 0 4.04887 0.00719217 0.00644995 1.29644 0.00644995 77.1106 2.96949 g 0 0 0 0 0 0 0 0 0 14.1458 4.3225 0.00644995 0.00644995 0.00644995 0.00653424 49.6223 t 0 0 0 0 0 0 0 0 0 60.5917 91.3478 97.4007 72.8909 0.651445 4.5805 17.0394

M07551_2.00_shift2 (CTCF)
; oligos_7nt_mkv5_m3 versus M07551_2.00 (CTCF); m=84/241; ncol2=11; w=-3; offset=-3; strand=D; shift=2; score=0.496769; --YTTTTrTTTTT--- ; cor=; Ncor= a 0 0 0 5.2632 0 5.2632 0 52.6316 0 5.2632 0 0 0 0 0 0 c 0 0 31.5789 0 0 0 0 5.2632 5.2632 10.5263 0 0 0 0 0 0 g 0 0 0 10.5263 0 15.7895 0 26.3158 0 10.5263 0 0 0 0 0 0 t 0 0 68.4211 84.2105 100 78.9474 100 15.7895 94.7368 73.6842 100 100 100 0 0 0

M10943_2.00_rc_shift2 (BORCS8-MEF2B,MEF2A_rc)
; oligos_7nt_mkv5_m3 versus M10943_2.00_rc (BORCS8-MEF2B,MEF2A_rc); m=85/241; ncol2=16; w=-3; offset=-3; strand=R; shift=2; score=0.496294; --rdkCTATTTwTAGm ; cor=; Ncor= a 0 0 44.7368 26.3158 7.89474 0 0 100 2.63158 13.1579 21.0526 60.5263 0 100 10.5263 36.8421 c 0 0 10.5263 5.26316 7.89474 92.1053 0 0 0 0 0 0 0 0 2.63158 52.6316 g 0 0 31.5789 34.2105 31.5789 0 0 0 0 0 0 0 0 0 86.8421 0 t 0 0 13.1579 34.2105 52.6316 7.89474 100 0 97.3684 86.8421 78.9474 39.4737 100 0 0 10.5263

M03228_2.00_shift8 (HOXC10,HOXC6)
; oligos_7nt_mkv5_m3 versus M03228_2.00 (HOXC10,HOXC6); m=86/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.494639; --------ktTTwATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 23.9526 12.427 2.34706 3.15315 34.5756 96.251 0.408163 12.0858 c 0 0 0 0 0 0 0 0 7.65975 6.58882 1.69296 0.12285 0 0 2.61224 2.12157 g 0 0 0 0 0 0 0 0 26.4917 15.3183 5.07888 0 2.23602 0.733496 0.571429 56.3051 t 0 0 0 0 0 0 0 0 41.8959 65.6658 90.8811 96.724 63.1884 3.01548 96.4082 29.4875

M07646_2.00_shift4 (ZNF613)
; oligos_7nt_mkv5_m3 versus M07646_2.00 (ZNF613); m=87/241; ncol2=9; w=-1; offset=-1; strand=D; shift=4; score=0.493842; ----mTTTTTTTW--- ; cor=; Ncor= a 0 0 0 0 29.5902 9.2623 4.34426 0.0819672 0.0819672 3.68852 3.68852 0.0819672 25.3279 0 0 0 c 0 0 0 0 42.377 7.95082 1.06557 0.0819672 2.04918 5.65574 0.0819672 0.0819672 0.0819672 0 0 0 g 0 0 0 0 18.1148 0.0819672 0.0819672 21.7213 0.0819672 0.0819672 0.0819672 0.0819672 0.0819672 0 0 0 t 0 0 0 0 9.91803 82.7049 94.5082 78.1148 97.7869 90.5738 96.1475 99.7541 74.5082 0 0 0

M05109_2.00_shift8 (HOXC5,HOXC6,HOXD9)
; oligos_7nt_mkv5_m3 versus M05109_2.00 (HOXC5,HOXC6,HOXD9); m=88/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.493458; --------dTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.9182 9.98407 0 0.746088 24.9587 98.7031 0.0234852 3.48391 c 0 0 0 0 0 0 0 0 13.2555 5.53356 0 0 0 0 2.5775 2.53683 g 0 0 0 0 0 0 0 0 35.4703 10.0205 0 0 0.0366703 0 1.32691 32.4827 t 0 0 0 0 0 0 0 0 25.356 74.4619 100 99.2539 75.0046 1.2969 96.0721 61.4965

M09572_2.00_shift8 (M09572_2.00)
; oligos_7nt_mkv5_m3 versus M09572_2.00; m=89/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.492401; --------rtTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.8 13.5 0.1 0.1 0.1 99.7 0.1 1.7 c 0 0 0 0 0 0 0 0 15.4 7.3 0.1 0.1 0.1 0.1 0.1 0.1 g 0 0 0 0 0 0 0 0 28.5 11.5 0.1 0.1 0.1 0.1 0.1 49.3 t 0 0 0 0 0 0 0 0 24.3 67.8 99.7 99.7 99.7 0.1 99.7 48.9

M03283_2.00_shift8 (HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M03283_2.00 (HOXC5,HOXC6); m=90/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.489504; --------wtTTwATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 33.3333 14.4737 3.36538 7.98122 48.2234 87.7828 2.15517 0 c 0 0 0 0 0 0 0 0 9.74359 13.1579 0 0 0 3.16742 13.3621 11.7264 g 0 0 0 0 0 0 0 0 14.359 8.55263 3.36538 0.938967 1.52284 3.16742 0.862069 25.0814 t 0 0 0 0 0 0 0 0 42.5641 63.8158 93.2692 91.0798 50.2538 5.88235 83.6207 63.1922

M03034_2.00_rc_shift8 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXL1,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M03034_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXL1,FOXS1_rc); m=91/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.488621; --------TGTTTAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.350443 22.113 0 0.310366 0 91.8171 2.83803 0 c 0 0 0 0 0 0 0 0 0 0 1.01792 0 1.043 0 54.2875 0 g 0 0 0 0 0 0 0 0 1.11317 77.887 1.66938 0.786261 11.4913 7.99078 0.263531 0 t 0 0 0 0 0 0 0 0 98.5364 0 97.3127 98.9034 87.4657 0.192086 42.611 0

M05114_2.00_shift8 (HOXC6,HOXD10)
; oligos_7nt_mkv5_m3 versus M05114_2.00 (HOXC6,HOXD10); m=92/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.488597; --------rTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.5264 6.05307 0 0 14.9956 98.0885 0 0 c 0 0 0 0 0 0 0 0 12.7245 3.93864 0 0 0 0 0 0.814664 g 0 0 0 0 0 0 0 0 40.1744 9.16252 0.15361 0 0 0 0 32.9939 t 0 0 0 0 0 0 0 0 20.5747 80.8458 99.8464 100 85.0044 1.91147 100 66.1914

M05334_2.00_shift8 (HOXC5,HOXC6,HOXC9)
; oligos_7nt_mkv5_m3 versus M05334_2.00 (HOXC5,HOXC6,HOXC9); m=93/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.487627; --------rTTTWATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 28.4254 11.5352 0.252958 0.722813 25.7764 98.2163 0.0856431 4.62912 c 0 0 0 0 0 0 0 0 14.2495 7.4459 0 0 0 0 3.20772 0.0655539 g 0 0 0 0 0 0 0 0 33.6769 11.592 0 0 0.223985 0 1.53379 33.6645 t 0 0 0 0 0 0 0 0 23.6483 69.4269 99.747 99.2772 73.9996 1.78371 95.1728 61.6409

M08325_2.00_shift4 (ZNF22)
; oligos_7nt_mkv5_m3 versus M08325_2.00 (ZNF22); m=94/241; ncol2=9; w=-1; offset=-1; strand=D; shift=4; score=0.48696; ----TTTTTTTTT--- ; cor=; Ncor= a 0 0 0 0 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0 0 0 c 0 0 0 0 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0 0 0 g 0 0 0 0 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0 0 0 t 0 0 0 0 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 0 0 0

M08306_2.00_shift4 (ZNF384)
; oligos_7nt_mkv5_m3 versus M08306_2.00 (ZNF384); m=95/241; ncol2=9; w=-1; offset=-1; strand=D; shift=4; score=0.48696; ----CTTTTTTTT--- ; cor=; Ncor= a 0 0 0 0 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0 0 0 c 0 0 0 0 75.8041 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0 0 0 g 0 0 0 0 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0 0 0 t 0 0 0 0 24.0497 99.7807 99.7807 99.7807 99.7807 99.7807 99.7807 99.7807 99.7807 0 0 0

M10812_2.00_rc_shift3 (PAX4_rc)
; oligos_7nt_mkv5_m3 versus M10812_2.00_rc (PAX4_rc); m=96/241; ncol2=11; w=-2; offset=-2; strand=R; shift=3; score=0.486942; ---sbtAATTwkTy-- ; cor=; Ncor= a 0 0 0 5.26316 5 20 80 90 0 5 50 15 0 13.3333 0 0 c 0 0 0 31.5789 25 20 5 0 0 10 10 5 22.2222 46.6667 0 0 g 0 0 0 47.3684 45 5 5 0 0 10 0 25 5.55556 13.3333 0 0 t 0 0 0 15.7895 25 55 10 10 100 75 40 55 72.2222 26.6667 0 0

M03062_2.00_rc_shift8 (M03062_2.00_rc)
; oligos_7nt_mkv5_m3 versus M03062_2.00_rc; m=97/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.485578; --------TGTTTAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 4.10243 15.8346 5.17674 6.47157 2.58999 71.6054 1.86097 0 c 0 0 0 0 0 0 0 0 2.19493 5.33537 2.44014 4.21128 2.50219 8.00719 61.7406 0 g 0 0 0 0 0 0 0 0 0 68.3308 10.6043 3.99714 16.1984 12.1406 0 0 t 0 0 0 0 0 0 0 0 93.7026 10.4992 81.7788 85.32 78.7094 8.24681 36.3985 0

M03060_2.00_rc_shift8 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M03060_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1_rc); m=98/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.484961; --------TGTTTAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 22.49 1.77515 3.48624 0.411184 83.4739 0 0 c 0 0 0 0 0 0 0 0 0.60241 0 0 3.76147 2.13816 0 38.7065 0 g 0 0 0 0 0 0 0 0 0 76.8072 0.591716 1.92661 16.0362 12.6476 1.49254 0 t 0 0 0 0 0 0 0 0 99.3976 0.702811 97.6331 90.8257 81.4145 3.87858 59.801 0

M03132_2.00_shift8 (HOXC11)
; oligos_7nt_mkv5_m3 versus M03132_2.00 (HOXC11); m=99/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.482147; --------wtTTwATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.8379 16.5589 4.43605 7.37836 28.9492 92.7315 4.81016 8.43284 c 0 0 0 0 0 0 0 0 14.7367 8.5692 1.44722 1.02433 1.94025 0 11.4579 6.47042 g 0 0 0 0 0 0 0 0 23.036 12.0348 5.41136 1.34443 1.23626 0 7.53952 32.8983 t 0 0 0 0 0 0 0 0 36.3894 62.8371 88.7054 90.2529 67.8743 7.26854 76.1924 52.1985

M03135_2.00_shift9 (HOXC12)
; oligos_7nt_mkv5_m3 versus M03135_2.00 (HOXC12); m=100/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.481721; ---------TTTTATT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 7.97118 1.35097 2.28491 13.4884 88.3074 1.47249 2.54091 c 0 0 0 0 0 0 0 0 0 5.56181 0.168871 0.0564175 0.709914 0.0510595 7.98243 11.025 g 0 0 0 0 0 0 0 0 0 8.57915 1.12581 0.0846262 1.12607 0 1.18832 11.9509 t 0 0 0 0 0 0 0 0 0 77.8879 97.3543 97.574 84.6756 11.6416 89.3568 74.4832

M08420_2.00_shift8 (M08420_2.00)
; oligos_7nt_mkv5_m3 versus M08420_2.00; m=101/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.481481; --------kTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.7977 17.5423 0 0 2.90925 95.8749 0 3.60399 c 0 0 0 0 0 0 0 0 0 6.38298 0 0 0 0 8.07642 0 g 0 0 0 0 0 0 0 0 32.7833 4.99349 0 0 0 4.12505 0 64.0469 t 0 0 0 0 0 0 0 0 45.419 71.0812 100 100 97.0908 0 91.9236 32.3491

M03134_2.00_shift8 (HOXC11)
; oligos_7nt_mkv5_m3 versus M03134_2.00 (HOXC11); m=102/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.481401; --------ktTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.2759 14.5644 3.79859 7.73381 20.0366 90.354 6.99756 3.17173 c 0 0 0 0 0 0 0 0 17.319 5.0065 0 0.44964 1.18939 2.47788 9.03173 7.65745 g 0 0 0 0 0 0 0 0 26.0274 14.0442 6.00707 0 5.3065 0 0.895037 42.9089 t 0 0 0 0 0 0 0 0 37.3777 66.3849 90.1943 91.8165 73.4675 7.16814 83.0757 46.2619

M05290_2.00_shift8 (HOXB9,HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M05290_2.00 (HOXB9,HOXC5,HOXC6); m=103/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.480806; --------rtTTWATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 34.2756 13.1792 0 2.58398 29.9398 100 2.2763 4.42433 c 0 0 0 0 0 0 0 0 14.0459 7.74566 0.601375 0 1.92771 0 7.29984 3.46908 g 0 0 0 0 0 0 0 0 31.5371 13.6994 2.23368 0 0 0 1.64835 35.2438 t 0 0 0 0 0 0 0 0 20.1413 65.3757 97.1649 97.416 68.1325 0 88.7755 56.8627

M00164_2.00_rc_shift8 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M00164_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc); m=104/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.478996; --------TrTTKAyw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 5.3457 33.2944 4.12605 4.00149 4.43052 72.07 12.5062 35.4381 c 0 0 0 0 0 0 0 0 4.55531 3.33806 2.35684 0.03164 0.0719717 3.18241 41.9393 19.6443 g 0 0 0 0 0 0 0 0 4.78886 60.0627 0.0770978 5.3477 25.4959 10.0507 10.8724 18.134 t 0 0 0 0 0 0 0 0 85.3101 3.30484 93.44 90.6192 70.0016 14.6969 34.6821 26.7836

M01691_2.00_rc_shift7 (M01691_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01691_2.00_rc; m=105/241; ncol2=7; w=0; offset=2; strand=R; shift=7; score=0.478483; -------atwwwyk-- ; cor=; Ncor= a 0 0 0 0 0 0 0 50.3232 19.3674 27.503 28.4747 30.0345 24.5068 20.4268 0 0 c 0 0 0 0 0 0 0 4.84751 22.9563 1.41099 15.4718 18.3999 25.2531 24.7011 0 0 g 0 0 0 0 0 0 0 21.2949 0.0723378 12.8622 9.57368 10.6158 19.0859 27.5733 0 0 t 0 0 0 0 0 0 0 23.5345 57.604 58.2238 46.4798 40.9498 31.1542 27.2989 0 0

M06200_2.00_rc_shift8 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6_rc)
; oligos_7nt_mkv5_m3 versus M06200_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6_rc); m=106/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.478354; --------TGTTTAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 5 0 0 0 0 100 5 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50 0 g 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 95 0 100 100 100 0 45 0

M03206_2.00_rc_shift9 (HOXD12_rc)
; oligos_7nt_mkv5_m3 versus M03206_2.00_rc (HOXD12_rc); m=107/241; ncol2=9; w=0; offset=4; strand=R; shift=9; score=0.477893; ---------TTTTATt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 8.35165 2.31111 0.769971 14.532 87.8943 0.450857 0.982318 c 0 0 0 0 0 0 0 0 0 7.98535 1.51111 0 0.246305 0 1.62308 16.8304 g 0 0 0 0 0 0 0 0 0 8.13187 4.53333 0 0.574713 0.767263 4.95942 14.6693 t 0 0 0 0 0 0 0 0 0 75.5311 91.6444 99.23 84.647 11.3384 92.9666 67.518

M09682_2.00_shift8 (HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M09682_2.00 (HOXC5,HOXC6); m=108/241; ncol2=9; w=0; offset=3; strand=D; shift=8; score=0.474601; --------ttTTAATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 7.23684 0.657895 19.9561 12.5 68.8596 98.0263 0.657895 0.657895 c 0 0 0 0 0 0 0 0 9.86842 20.614 0.657895 0 0.657895 0.657895 0.657895 0.657895 g 0 0 0 0 0 0 0 0 15.1316 14.2544 8.99123 0 8.99123 0.657895 4.82456 36.8421 t 0 0 0 0 0 0 0 0 67.7632 64.4737 70.3947 87.5 21.4912 0.657895 93.8596 61.8421

M05117_2.00_rc_shift8 (HOXC6,HOXD10_rc)
; oligos_7nt_mkv5_m3 versus M05117_2.00_rc (HOXC6,HOXD10_rc); m=109/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.473764; --------dTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.0358 6.58426 2.09966 0 12.7032 94.4279 0 0.851558 c 0 0 0 0 0 0 0 0 8.1352 3.56549 0.167973 0 0 0.432783 1.74255 1.35475 g 0 0 0 0 0 0 0 0 33.1997 6.8695 0 0.0572574 0 0 0.140528 30.2303 t 0 0 0 0 0 0 0 0 33.6293 82.9807 97.7324 99.9427 87.2968 5.1393 98.1169 67.5634

M05111_2.00_shift8 (HOXC5,HOXC6,HOXD9)
; oligos_7nt_mkv5_m3 versus M05111_2.00 (HOXC5,HOXC6,HOXD9); m=110/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.472617; --------gtTTWATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 22.8443 13.4576 0.292475 1.57068 27.9512 98.674 1.69318 3.97459 c 0 0 0 0 0 0 0 0 17.8331 10.4382 0 0 0 0.0276243 4.84864 0 g 0 0 0 0 0 0 0 0 40.2856 14.4755 4.73278 0 0.580232 0 1.82145 37.84 t 0 0 0 0 0 0 0 0 19.037 61.6287 94.9747 98.4293 71.4686 1.29834 91.6367 58.1854

M03045_2.00_rc_shift8 (FOXD3,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI2,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M03045_2.00_rc (FOXD3,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI2,FOXI3,FOXS1_rc); m=111/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.472259; --------TrTTTAC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2.57147 42.1102 0.281999 0.0934579 0.875985 77.7451 1.31838 0 c 0 0 0 0 0 0 0 0 14.6195 0.6827 0.328999 0 0.112627 1.60539 71.7836 0 g 0 0 0 0 0 0 0 0 0 56.3227 0 1.09034 19.6221 11.5196 2.54584 0 t 0 0 0 0 0 0 0 0 82.809 0.884407 99.389 98.8162 79.3893 9.1299 24.3522 0

M05395_2.00_shift8 (HOXA10,HOXC6)
; oligos_7nt_mkv5_m3 versus M05395_2.00 (HOXA10,HOXC6); m=112/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.471597; --------kTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 22.9094 4.51972 0 0 10.8053 98.5685 0 0.879813 c 0 0 0 0 0 0 0 0 14.6073 4.02553 0 0 0 0 0.732821 0.968601 g 0 0 0 0 0 0 0 0 32.7484 6.3832 0.0846433 0 0 0 0 31.4553 t 0 0 0 0 0 0 0 0 29.735 85.0716 99.9154 100 89.1947 1.43147 99.2672 66.6963

M03054_2.00_rc_shift8 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI2,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M03054_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI2,FOXI3,FOXS1_rc); m=113/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.47149; --------TGTTTAC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 16.6735 0 0 0 88.4672 0.221637 0 c 0 0 0 0 0 0 0 0 0.442294 0.411353 0 0.0688231 0 1.68263 77.7532 0 g 0 0 0 0 0 0 0 0 0 82.0924 0 0.784584 10.1758 4.38467 0 0 t 0 0 0 0 0 0 0 0 99.5577 0.822707 100 99.1466 89.8242 5.46549 22.0252 0

M03196_2.00_shift9 (CDX2)
; oligos_7nt_mkv5_m3 versus M03196_2.00 (CDX2); m=114/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.471169; ---------tTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 13.1579 3.56245 6.04396 6.46244 97.4779 0.0821355 7.96533 c 0 0 0 0 0 0 0 0 0 10.2541 2.13747 0.845309 0.125892 0.309735 8.9117 1.11432 g 0 0 0 0 0 0 0 0 0 20.6443 1.96982 0 0.96517 1.0177 0.533881 38.052 t 0 0 0 0 0 0 0 0 0 55.9437 92.3303 93.1107 92.4465 1.19469 90.4723 52.8683

M05112_2.00_shift8 (HOXC6,HOXD10)
; oligos_7nt_mkv5_m3 versus M05112_2.00 (HOXC6,HOXD10); m=115/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.471013; --------rtTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 27.0316 12.5541 0.858545 0 20.9387 99.2893 0 0.784122 c 0 0 0 0 0 0 0 0 16.5895 11.7647 0 0 0 0 1.69702 1.9603 g 0 0 0 0 0 0 0 0 37.4316 15.2024 2.04415 0 0 0 0 39.0591 t 0 0 0 0 0 0 0 0 18.9474 60.4787 97.0973 100 79.0613 0.710702 98.303 58.1965

M07301_2.00_rc_shift1 (LIN54_rc)
; oligos_7nt_mkv5_m3 versus M07301_2.00_rc (LIN54_rc); m=116/241; ncol2=14; w=-4; offset=-4; strand=R; shift=1; score=0.470098; -wTTYrAATTTtrAA- ; cor=; Ncor= a 0 57 0 0 0 52.1667 100 98.1667 16 2.8333 2.6667 11 53.1667 81.1667 70 0 c 0 0.5 0 0 31.1667 0 0 0.6667 4.6667 1.3333 6.8333 19.3333 7.1667 0.5 3.5 0 g 0 13.1667 0 0 0 47.8333 0 0 0 2.1667 1.5 20.1667 27.5 7.1667 6.8333 0 t 0 29.3333 100 100 68.8333 0 0 1.1667 79.3333 93.6667 89 49.5 12.1667 11.1667 19.6667 0

M03086_2.00_shift8 (HOXA9,HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M03086_2.00 (HOXA9,HOXC5,HOXC6); m=117/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.469905; --------ttTTWATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.4004 14.6154 3.5194 4.32579 28.2054 95.6844 2.71866 6.43318 c 0 0 0 0 0 0 0 0 14.6761 11.0788 1.32908 0.856145 1.40911 0 7.31086 6.87013 g 0 0 0 0 0 0 0 0 24.9254 14.7859 6.03934 0.405542 0.978223 0.125585 4.63293 30.3576 t 0 0 0 0 0 0 0 0 35.9981 59.5199 89.1122 94.4125 69.4072 4.18998 85.3375 56.3391

M03043_2.00_rc_shift8 (FOXD2,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M03043_2.00_rc (FOXD2,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc); m=118/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.469246; --------TRTTTAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 7.77042 26.6631 1.84114 1.61861 5.29334 74.313 1.53925 0 c 0 0 0 0 0 0 0 0 9.84547 1.47835 0 1.01163 0 0 64.6998 0 g 0 0 0 0 0 0 0 0 0 71.8585 0 2.98432 12.3952 15.2927 2.71934 0 t 0 0 0 0 0 0 0 0 82.3841 0 98.1589 94.3854 82.3114 10.3943 31.0416 0

M03773_2.00_shift8 (HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M03773_2.00 (HOXC5,HOXC6); m=119/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.46913; --------kTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.0957 10.4474 0.638503 0.728763 22.5406 99.3089 0.233543 5.72137 c 0 0 0 0 0 0 0 0 9.27583 4.33172 0.215309 0 0.517769 0 3.06525 1.68477 g 0 0 0 0 0 0 0 0 34.5186 10.6868 2.05657 0 0 0 1.26259 36.6758 t 0 0 0 0 0 0 0 0 32.1098 74.5341 97.0896 99.2712 76.9416 0.691069 95.4386 55.9181

M05119_2.00_rc_shift8 (HOXC6,HOXD10_rc)
; oligos_7nt_mkv5_m3 versus M05119_2.00_rc (HOXC6,HOXD10_rc); m=120/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.468041; --------dTTTTATT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 27.5792 0 0.406918 0 8.41908 97.8022 0 0 c 0 0 0 0 0 0 0 0 8.27375 2.08522 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 34.525 9.15684 0 0 0 0 0 22.1781 t 0 0 0 0 0 0 0 0 29.6221 88.7579 99.5931 100 91.5809 2.1978 100 77.8219

M03139_2.00_rc_shift8 (HOXD11_rc)
; oligos_7nt_mkv5_m3 versus M03139_2.00_rc (HOXD11_rc); m=121/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.467755; --------wtTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 29.8701 19.8324 2.90456 1.28755 24.2424 96.6387 0 8.55019 c 0 0 0 0 0 0 0 0 9.95671 7.82123 0 0 0 0 77.1812 0 g 0 0 0 0 0 0 0 0 22.0779 8.10056 1.65975 0 0 0 0 85.5019 t 0 0 0 0 0 0 0 0 38.0952 64.2458 95.4357 98.7124 75.7576 3.36134 22.8188 5.94796

M00394_2.00_shift9 (M00394_2.00)
; oligos_7nt_mkv5_m3 versus M00394_2.00; m=122/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.467723; ---------wtTtayk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 26.8595 16.1909 14.6018 23.7832 61.6295 10.5546 24.0622 c 0 0 0 0 0 0 0 0 0 15.8096 8.45238 11.1467 13.8596 13.0807 32.6735 11.7123 g 0 0 0 0 0 0 0 0 0 20.71 11.64 4.76427 10.4749 14.8967 9.93997 34.8357 t 0 0 0 0 0 0 0 0 0 36.6209 63.7168 69.4873 51.8823 10.3931 46.8319 29.3897

M05085_2.00_rc_shift8 (HOXC12_rc)
; oligos_7nt_mkv5_m3 versus M05085_2.00_rc (HOXC12_rc); m=123/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.46505; --------dTTTTATT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.7143 11.4206 3.54331 5.92593 17.8571 99.1903 0.37037 0 c 0 0 0 0 0 0 0 0 11.4286 6.40669 0 3.33333 0.324675 0 6.66667 8.5044 g 0 0 0 0 0 0 0 0 30.6122 13.9276 0 0 2.27273 0.809717 2.22222 19.6481 t 0 0 0 0 0 0 0 0 32.2449 68.2451 96.4567 90.7407 79.5455 0 90.7407 71.8475

M04979_2.00_shift8 (HOXA13)
; oligos_7nt_mkv5_m3 versus M04979_2.00 (HOXA13); m=124/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.465009; --------kTTTTATT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.1601 7.21393 3.33333 4.05862 3.62401 100 2.23214 8.33333 c 0 0 0 0 0 0 0 0 6.3867 3.56551 0 0 0 0 2.79018 0 g 0 0 0 0 0 0 0 0 44.007 18.6567 2.11111 0 0 0 0 17.0175 t 0 0 0 0 0 0 0 0 30.4462 70.5638 94.5556 95.9414 96.376 0 94.9777 74.6491

M04981_2.00_shift8 (HOXA13)
; oligos_7nt_mkv5_m3 versus M04981_2.00 (HOXA13); m=125/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.464912; --------kTTTTATt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.3556 12.9957 2.13493 0.524476 8.2449 100 1.81818 10.9903 c 0 0 0 0 0 0 0 0 11.5556 5.2471 0 0.786713 0 0 0.865801 0.966184 g 0 0 0 0 0 0 0 0 36.4444 13.1788 1.87874 0.437063 0 0 0 20.1691 t 0 0 0 0 0 0 0 0 27.6444 68.5784 95.9863 98.2517 91.7551 0 97.316 67.8744

M03040_2.00_rc_shift8 (FOXO4_rc)
; oligos_7nt_mkv5_m3 versus M03040_2.00_rc (FOXO4_rc); m=126/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.464648; --------TGTTTAC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.735565 14.9059 0.182548 0.359518 0.298998 90.9214 0 0 c 0 0 0 0 0 0 0 0 0.183891 0.513459 1.64294 0.341542 0.478397 2.07946 76.1756 0 g 0 0 0 0 0 0 0 0 0.183891 83.6782 0 2.62448 18.8219 1.16653 0.184136 0 t 0 0 0 0 0 0 0 0 98.8967 0.902443 98.1745 96.6745 80.4007 5.83263 23.6402 0

M03026_2.00_rc_shift8 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI1,FOXI2,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M03026_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI1,FOXI2,FOXI3,FOXS1_rc); m=127/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.463342; --------TGTTTAC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 13.0856 1.24693 0 0 96.8376 0 0 c 0 0 0 0 0 0 0 0 0.479662 0.775444 0.547893 0 0.643255 0.65494 88.7346 0 g 0 0 0 0 0 0 0 0 0.230238 83.6026 0.434536 0.442478 9.38804 1.12275 0.668724 0 t 0 0 0 0 0 0 0 0 99.2901 2.53635 97.7706 99.5575 89.9687 1.38473 10.5967 0

M03209_2.00_shift9 (HOXD12)
; oligos_7nt_mkv5_m3 versus M03209_2.00 (HOXD12); m=128/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.46222; ---------tTTWATy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 14.3561 3.03176 5.66319 26.1533 88.7271 1.20037 0 c 0 0 0 0 0 0 0 0 0 12.2304 1.49182 0 3.55975 2.0667 7.84857 26.8308 g 0 0 0 0 0 0 0 0 0 15.2187 4.5717 0.496771 1.6709 0.892438 3.73961 12.7598 t 0 0 0 0 0 0 0 0 0 58.1947 90.9047 93.84 68.6161 8.31376 87.2114 60.4093

M00008_2.00_rc_shift6 (M00008_2.00_rc)
; oligos_7nt_mkv5_m3 versus M00008_2.00_rc; m=129/241; ncol2=7; w=0; offset=1; strand=R; shift=6; score=0.462141; ------wwttwwt--- ; cor=; Ncor= a 0 0 0 0 0 0 42.9198 45.8058 21.8294 20.3138 30.0157 26.1864 22.2583 0 0 0 c 0 0 0 0 0 0 11.2384 8.20227 6.31709 11.1484 20.9413 23.6944 24.5993 0 0 0 g 0 0 0 0 0 0 13.7266 13.3887 4.27703 6.89847 11.2652 18.4532 24.8465 0 0 0 t 0 0 0 0 0 0 32.1153 32.6032 67.5764 61.6393 37.7778 31.6659 28.2959 0 0 0

M09149_2.00_shift9 (HOXB13)
; oligos_7nt_mkv5_m3 versus M09149_2.00 (HOXB13); m=130/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.461938; ---------TTTTATd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 6.8 1 0 1.4 94.4 2.4 26.2 c 0 0 0 0 0 0 0 0 0 10.8 0.6 0.4 2.4 2.2 10 1 g 0 0 0 0 0 0 0 0 0 10 1.8 0.2 2.6 3.4 0.2 32.4 t 0 0 0 0 0 0 0 0 0 72.4 96.6 99.4 93.6 0 87.4 40.4

M00298_2.00_shift9 (HOXD13)
; oligos_7nt_mkv5_m3 versus M00298_2.00 (HOXD13); m=131/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.461761; ---------tTTwAyd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 24.6046 11.8286 12.6973 29.5284 90.579 5.48617 30.326 c 0 0 0 0 0 0 0 0 0 14.4824 4.01695 5.11095 6.08211 0.0332474 28.0007 6.76664 g 0 0 0 0 0 0 0 0 0 20.347 8.17044 3.03857 4.32907 6.2728 2.29844 29.7255 t 0 0 0 0 0 0 0 0 0 40.5661 75.984 79.1532 60.0605 3.11498 64.2146 33.1819

M03248_2.00_shift8 (M03248_2.00)
; oligos_7nt_mkv5_m3 versus M03248_2.00; m=132/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.460565; --------dtTTTAyk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.737 15.4627 2.64523 2.19171 20.4086 99.865 0.697987 12.0983 c 0 0 0 0 0 0 0 0 10.1108 7.04061 1.06328 0 0.595871 0.0809935 59.3557 1.12468 g 0 0 0 0 0 0 0 0 35.0906 15.9288 0.363071 0.132031 0.276655 0.0539957 0 59.4312 t 0 0 0 0 0 0 0 0 28.0616 61.5679 95.9284 97.6763 78.7189 0 39.9463 27.3458

M03115_2.00_shift9 (CDX1)
; oligos_7nt_mkv5_m3 versus M03115_2.00 (CDX1); m=133/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.460288; ---------tTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 17.4682 6.10065 8.15551 13.0443 99.5705 0.722727 8.14506 c 0 0 0 0 0 0 0 0 0 13.554 2.39903 0.760012 1.00548 0 7.3933 1.9296 g 0 0 0 0 0 0 0 0 0 18.8376 4.59188 0.721037 2.69324 0.128838 1.30872 38.8151 t 0 0 0 0 0 0 0 0 0 50.1402 86.9084 90.3634 83.257 0.300623 90.5753 51.1102

M00473_2.00_shift9 (M00473_2.00)
; oligos_7nt_mkv5_m3 versus M00473_2.00; m=134/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.459979; ---------tTTwAyd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 24.449 12.4284 12.3768 27.1565 80.9605 7.64758 25.0689 c 0 0 0 0 0 0 0 0 0 16.0642 6.17177 5.96448 7.78047 1.94247 38.2594 6.7641 g 0 0 0 0 0 0 0 0 0 21.9023 10.5908 3.72782 5.82184 9.06083 3.47082 38.154 t 0 0 0 0 0 0 0 0 0 37.5845 70.809 77.9309 59.2412 8.03624 50.6222 30.013

M02719_2.00_rc_shift7 (SOX1_rc)
; oligos_7nt_mkv5_m3 versus M02719_2.00_rc (SOX1_rc); m=135/241; ncol2=7; w=0; offset=2; strand=R; shift=7; score=0.459808; -------ATTGTTw-- ; cor=; Ncor= a 0 0 0 0 0 0 0 100 0 0 4.34783 0 4.34783 34.7826 0 0 c 0 0 0 0 0 0 0 0 0 0 0 4.34783 4.34783 13.0435 0 0 g 0 0 0 0 0 0 0 0 4.34783 0 95.6522 0 0 17.3913 0 0 t 0 0 0 0 0 0 0 0 95.6522 100 0 95.6522 91.3043 34.7826 0 0

M05341_2.00_shift8 (HOXC10,HOXC6)
; oligos_7nt_mkv5_m3 versus M05341_2.00 (HOXC10,HOXC6); m=136/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.45973; --------gTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 23.515 2.8028 0 0 5.85334 95.497 0 0 c 0 0 0 0 0 0 0 0 11.4605 0 0 0.173974 0 0 0 0 g 0 0 0 0 0 0 0 0 45.5276 1.66834 0 0.208768 0 0 0 32.5877 t 0 0 0 0 0 0 0 0 19.4969 95.5289 100 99.6173 94.1467 4.503 100 67.4123

M05083_2.00_rc_shift8 (HOXC12_rc)
; oligos_7nt_mkv5_m3 versus M05083_2.00_rc (HOXC12_rc); m=137/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.459615; --------rtTTTATT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.4145 13.6819 0 0 16.1905 99.509 0 0.950119 c 0 0 0 0 0 0 0 0 13.9803 8.45384 0 0 0 0 13.5135 5.70071 g 0 0 0 0 0 0 0 0 31.25 10.2336 0.977199 0 1.08844 0.490998 0 21.1401 t 0 0 0 0 0 0 0 0 23.3553 67.6307 99.0228 100 82.7211 0 86.4865 72.209

M05076_2.00_shift8 (HOXC11)
; oligos_7nt_mkv5_m3 versus M05076_2.00 (HOXC11); m=138/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.458929; --------dtTTWATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.0335 17.0621 1.83968 0.400712 26.0798 99.9107 0 4.68412 c 0 0 0 0 0 0 0 0 16.1824 7.23164 0 0 0 0 11.8275 3.32612 g 0 0 0 0 0 0 0 0 32.4989 12.5141 0.175208 0 0.719895 0.0893256 2.82335 47.963 t 0 0 0 0 0 0 0 0 26.2852 63.1921 97.9851 99.5993 73.2003 0 85.3491 44.0268

M03230_2.00_shift8 (HOXC10,HOXC6)
; oligos_7nt_mkv5_m3 versus M03230_2.00 (HOXC10,HOXC6); m=139/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.458551; --------wtTTwAyG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 33.9975 19.9329 5.25281 3.07136 32.5054 99.1662 0.408233 4.11924 c 0 0 0 0 0 0 0 0 14.1034 9.91982 2.41573 0.150557 0.124185 0 54.6181 0.325203 g 0 0 0 0 0 0 0 0 21.1395 10.2741 2.13483 0.0903342 0.155231 0 0.102058 87.019 t 0 0 0 0 0 0 0 0 30.7597 59.8732 90.1966 96.6877 67.2152 0.833848 44.8716 8.53659

M10761_2.00_rc_shift9 (NKX2-6_rc)
; oligos_7nt_mkv5_m3 versus M10761_2.00_rc (NKX2-6_rc); m=140/241; ncol2=7; w=0; offset=4; strand=R; shift=9; score=0.458448; ---------mTTTatr ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 47.3684 21.0526 5.26316 21.0526 57.8947 21.0526 31.5789 c 0 0 0 0 0 0 0 0 0 31.5789 0 0 0 15.7895 15.7895 15.7895 g 0 0 0 0 0 0 0 0 0 10.5263 5.26316 0 10.5263 21.0526 10.5263 47.3684 t 0 0 0 0 0 0 0 0 0 10.5263 73.6842 94.7368 68.4211 5.26316 52.6316 5.26316

M09102_2.00_rc_shift1 (FOXI2,FOXI3,FOXP4_rc)
; oligos_7nt_mkv5_m3 versus M09102_2.00_rc (FOXI2,FOXI3,FOXP4_rc); m=141/241; ncol2=13; w=-4; offset=-4; strand=R; shift=1; score=0.45827; -tTGTTTATkkTTw-- ; cor=; Ncor= a 0 19.4096 0 8.29351 0.107382 0 0.883421 81.8242 0 11.3282 4.40217 5.27816 0.586565 35.8521 0 0 c 0 14.6471 0 0 0 0 0 0 7.11126 0 0 0 1.01355 7.03788 0 0 g 0 16.469 0 91.438 0 0 17.5693 3.69269 0 43.021 32.5679 2.91214 1.68075 13.8458 0 0 t 0 49.4743 100 0.268455 99.8926 100 81.5473 14.4831 92.8887 45.6508 63.0299 91.8097 96.7191 43.2642 0 0

M09098_2.00_rc_shift1 (FOXI2,FOXI3,FOXJ3_rc)
; oligos_7nt_mkv5_m3 versus M09098_2.00_rc (FOXI2,FOXI3,FOXJ3_rc); m=142/241; ncol2=13; w=-4; offset=-4; strand=R; shift=1; score=0.45827; -tTGTTTATkkTTw-- ; cor=; Ncor= a 0 19.4096 0 8.29351 0.107382 0 0.883421 81.8242 0 11.3282 4.40217 5.27816 0.586565 35.8521 0 0 c 0 14.6471 0 0 0 0 0 0 7.11126 0 0 0 1.01355 7.03788 0 0 g 0 16.469 0 91.438 0 0 17.5693 3.69269 0 43.021 32.5679 2.91214 1.68075 13.8458 0 0 t 0 49.4743 100 0.268455 99.8926 100 81.5473 14.4831 92.8887 45.6508 63.0299 91.8097 96.7191 43.2642 0 0

M05106_2.00_shift8 (HOXC5,HOXC6,HOXD9)
; oligos_7nt_mkv5_m3 versus M05106_2.00 (HOXC5,HOXC6,HOXD9); m=143/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.458169; --------gtTTwATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.5111 16.6242 3.35229 4.05666 28.7304 98.1518 0.812568 5.09129 c 0 0 0 0 0 0 0 0 21.0491 15.6383 1.25711 0 1.88508 0 10.5092 1.63272 g 0 0 0 0 0 0 0 0 43.3759 17.1851 6.37534 0.193175 1.83965 0 8.12568 41.0639 t 0 0 0 0 0 0 0 0 15.0639 50.5524 89.0153 95.7502 67.5449 1.84818 80.5525 52.2121

M03012_2.00_rc_shift8 (FOXP3_rc)
; oligos_7nt_mkv5_m3 versus M03012_2.00_rc (FOXP3_rc); m=144/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.458087; --------TGTTTAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 13.8298 0 3.50877 12.8099 74.5583 0 0 c 0 0 0 0 0 0 0 0 7.86026 11.3475 17.8182 3.94737 0 0 64.9289 0 g 0 0 0 0 0 0 0 0 0 74.8227 5.45455 0 0 18.3746 0 0 t 0 0 0 0 0 0 0 0 92.1397 0 76.7273 92.5439 87.1901 7.06714 35.0711 0

M05080_2.00_shift8 (HOXC11)
; oligos_7nt_mkv5_m3 versus M05080_2.00 (HOXC11); m=145/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.45679; --------ktTTwATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.6981 17.2757 1.62162 3.98551 28.0813 99.4361 0.446429 5.96546 c 0 0 0 0 0 0 0 0 16.9811 6.97674 2.16216 0.181159 0 0.56391 13.9881 4.23862 g 0 0 0 0 0 0 0 0 34.3396 17.165 0.900901 0 4.7014 0 6.84524 48.2732 t 0 0 0 0 0 0 0 0 26.9811 58.5825 95.3153 95.8333 67.2173 0 78.7202 41.5228

M05339_2.00_shift8 (HOXC10,HOXC6)
; oligos_7nt_mkv5_m3 versus M05339_2.00 (HOXC10,HOXC6); m=146/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.45671; --------rTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.7716 7.89438 0 0 11.6899 98.9649 0 0 c 0 0 0 0 0 0 0 0 13.9918 4.27051 0 0 0 0 0.630431 0 g 0 0 0 0 0 0 0 0 38.4259 9.26849 0 0 0 0 0 36.0386 t 0 0 0 0 0 0 0 0 21.8107 78.5666 100 100 88.3101 1.03513 99.3696 63.9614

M05397_2.00_shift8 (HOXA10,HOXC6)
; oligos_7nt_mkv5_m3 versus M05397_2.00 (HOXA10,HOXC6); m=147/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.455156; --------gTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.6936 10.5779 0 1.06914 15.9485 94.6758 0 1.73934 c 0 0 0 0 0 0 0 0 13.951 5.27572 0 0.0712758 0.867744 0 0.537827 0.476531 g 0 0 0 0 0 0 0 0 37.0584 10.6045 0.644699 0 0.179533 0 0 31.6893 t 0 0 0 0 0 0 0 0 24.297 73.5419 99.3553 98.8596 83.0042 5.32423 99.4622 66.0948

M03085_2.00_shift7 (HOXA9,HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M03085_2.00 (HOXA9,HOXC5,HOXC6); m=148/241; ncol2=12; w=0; offset=2; strand=D; shift=7; score=0.454953; -------wwtTTWAyG ; cor=; Ncor= a 0 0 0 0 0 0 0 31.4617 29.9844 20.4436 5.00308 2.09424 28.1015 99.1385 0.551181 3.19527 c 0 0 0 0 0 0 0 21.2344 16.0392 9.31608 0.51261 0 0.441501 0 58.8976 0.0788955 g 0 0 0 0 0 0 0 20.41 23.2346 14.9353 2.46053 0 0.507726 0 0.0918635 88.5207 t 0 0 0 0 0 0 0 26.8939 30.7418 55.305 92.0238 97.9058 70.9492 0.861498 40.4593 8.20513

M04898_2.00_shift8 (HOXA11)
; oligos_7nt_mkv5_m3 versus M04898_2.00 (HOXA11); m=149/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.454754; --------dtTTtATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.7406 18.9453 1.25 3.28947 24.9428 100 2.04604 4.46043 c 0 0 0 0 0 0 0 0 9.21502 10.1562 0 0 4.11899 0 18.4143 7.76978 g 0 0 0 0 0 0 0 0 33.7884 13.8672 7.5 0.657895 4.11899 0 4.85934 45.7554 t 0 0 0 0 0 0 0 0 25.256 57.0312 91.25 96.0526 66.8192 0 74.6803 42.0144

M03050_2.00_rc_shift8 (FOXO6,FOXP4_rc)
; oligos_7nt_mkv5_m3 versus M03050_2.00_rc (FOXO6,FOXP4_rc); m=150/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.454293; --------TGTTTAC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 5.17404 0 0.358819 0 97.4206 0 0 c 0 0 0 0 0 0 0 0 0.184712 0.416611 0 0 0.085585 0.443766 82.9398 0 g 0 0 0 0 0 0 0 0 0 94.4094 0 2.69114 14.0237 0 0 0 t 0 0 0 0 0 0 0 0 99.8153 0 100 96.95 85.8907 2.13563 17.0602 0

M05078_2.00_shift8 (HOXC11)
; oligos_7nt_mkv5_m3 versus M05078_2.00 (HOXC11); m=151/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.454123; --------ktTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.9481 16.84 0.865266 0.25413 23.6538 100 0.29274 5.92718 c 0 0 0 0 0 0 0 0 14.8623 5.4 0.123609 0.508259 0 0 7.37705 1.35478 g 0 0 0 0 0 0 0 0 37.476 15.28 2.47219 0 1.25 0 0.87822 48.6311 t 0 0 0 0 0 0 0 0 26.7136 62.48 96.5389 99.2376 75.0962 0 91.452 44.0869

M00299_2.00_shift9 (HOXD13)
; oligos_7nt_mkv5_m3 versus M00299_2.00 (HOXD13); m=152/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.453798; ---------ttTwAyd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 24.6631 14.6319 16.2793 26.8819 85.0146 7.10144 27.3384 c 0 0 0 0 0 0 0 0 0 17.0357 6.91164 6.48759 11.2622 0.164117 34.4772 8.48494 g 0 0 0 0 0 0 0 0 0 21.8742 12.2216 2.80076 6.62898 9.80432 5.42109 32.73 t 0 0 0 0 0 0 0 0 0 36.427 66.2348 74.4324 55.227 5.01695 53.0003 31.4466

M09100_2.00_rc_shift8 (FOXI2,FOXI3_rc)
; oligos_7nt_mkv5_m3 versus M09100_2.00_rc (FOXI2,FOXI3_rc); m=153/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.453388; --------TrTTTrTt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.8707 0 0 0 54.8813 0 11.8734 c 0 0 0 0 0 0 0 0 2.37467 0 0 0 0 0 19.2612 21.6359 g 0 0 0 0 0 0 0 0 0 64.3799 2.37467 0 0 45.1187 0 0 t 0 0 0 0 0 0 0 0 97.6253 4.74934 97.6253 100 100 0 80.7388 66.4908

M09084_2.00_rc_shift8 (FOXI2,FOXI3,FOXJ2_rc)
; oligos_7nt_mkv5_m3 versus M09084_2.00_rc (FOXI2,FOXI3,FOXJ2_rc); m=154/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.453388; --------TrTTTrTt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.8707 0 0 0 54.8813 0 11.8734 c 0 0 0 0 0 0 0 0 2.37467 0 0 0 0 0 19.2612 21.6359 g 0 0 0 0 0 0 0 0 0 64.3799 2.37467 0 0 45.1187 0 0 t 0 0 0 0 0 0 0 0 97.6253 4.74934 97.6253 100 100 0 80.7388 66.4908

M03274_2.00_shift7 (M03274_2.00)
; oligos_7nt_mkv5_m3 versus M03274_2.00; m=155/241; ncol2=12; w=0; offset=2; strand=D; shift=7; score=0.452971; -------awtTTwAYG ; cor=; Ncor= a 0 0 0 0 0 0 0 48.7216 29.9716 16.7375 5.16796 4.20624 29.8611 97.5069 0.726895 4.67532 c 0 0 0 0 0 0 0 15.9091 21.3068 9.94053 0.387597 0.27137 1.80556 0.415512 73.1049 0 g 0 0 0 0 0 0 0 15.625 23.2955 13.5089 3.48837 0 0.416667 0.138504 0.207684 91.4286 t 0 0 0 0 0 0 0 19.7443 25.4261 59.8131 90.9561 95.5224 67.9167 1.93906 25.9605 3.8961

M03275_2.00_shift8 (M03275_2.00)
; oligos_7nt_mkv5_m3 versus M03275_2.00; m=156/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.452939; --------dtTTwATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 28.7129 13.0986 0.227273 5.38642 37.2922 93.0876 0.178891 3.23974 c 0 0 0 0 0 0 0 0 17.8218 10.7042 0.909091 0 0.950119 0 10.9123 8.09935 g 0 0 0 0 0 0 0 0 25.2475 19.2958 7.04545 0 3.32542 0 16.6369 45.0324 t 0 0 0 0 0 0 0 0 28.2178 56.9014 91.8182 94.6136 58.4323 6.91244 72.2719 43.6285

M05201_2.00_shift8 (HOXB13)
; oligos_7nt_mkv5_m3 versus M05201_2.00 (HOXB13); m=157/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.451362; --------gTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 22.3602 6.94981 0 0.0775795 1.52905 100 0.231422 8.94056 c 0 0 0 0 0 0 0 0 8.46273 3.35907 0.129232 0 0 0 0.411417 0.294744 g 0 0 0 0 0 0 0 0 52.3551 15.0965 0 0 0 0 0 27.493 t 0 0 0 0 0 0 0 0 16.8219 74.5946 99.8708 99.9224 98.4709 0 99.3572 63.2717

M00796_2.00_rc_shift8 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M00796_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXS1_rc); m=158/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.451326; --------TrTTkayw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11.0835 32.3871 7.97426 8.346 11.1071 56.2548 7.58821 30.8572 c 0 0 0 0 0 0 0 0 6.85832 5.19533 8.99096 5.11298 4.89193 5.81181 43.2326 20.8921 g 0 0 0 0 0 0 0 0 7.20995 56.1351 5.8487 9.69667 28.4341 16.6081 10.4499 19.4796 t 0 0 0 0 0 0 0 0 74.8482 6.28246 77.1861 76.8444 55.5669 21.3252 38.7293 28.7711

M00295_2.00_shift9 (HOXD13)
; oligos_7nt_mkv5_m3 versus M00295_2.00 (HOXD13); m=159/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.451281; ---------ttTwAyd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 24.5248 14.8915 16.1116 27.0247 86.3064 6.93706 26.9029 c 0 0 0 0 0 0 0 0 0 17.2823 7.62011 6.35689 10.9874 1.11394 33.344 8.34976 g 0 0 0 0 0 0 0 0 0 21.9702 12.0708 3.12533 6.46726 9.09663 4.74399 32.8592 t 0 0 0 0 0 0 0 0 0 36.2227 65.4176 74.4062 55.5205 3.48303 54.975 31.8881

M03101_2.00_rc_shift8 (HOXA13_rc)
; oligos_7nt_mkv5_m3 versus M03101_2.00_rc (HOXA13_rc); m=160/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.451234; --------kTTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 22 14.5363 0 0 6.52174 94.9367 1.39276 16.4345 c 0 0 0 0 0 0 0 0 10.6667 7.76942 0 0 0 0 83.5655 0 g 0 0 0 0 0 0 0 0 26 2.50627 0 0 0.310559 0.949367 1.67131 83.5655 t 0 0 0 0 0 0 0 0 41.3333 75.188 100 100 93.1677 4.11392 13.3705 0

M05337_2.00_shift8 (HOXC10,HOXC6)
; oligos_7nt_mkv5_m3 versus M05337_2.00 (HOXC10,HOXC6); m=161/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.45076; --------gTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.5214 7.38383 0 0 9.30587 97.8601 0 0 c 0 0 0 0 0 0 0 0 20.6056 3.50095 0.167926 0 0 0 0 0.152207 g 0 0 0 0 0 0 0 0 40.286 13.4309 0 0.668338 0 0 0 39.5231 t 0 0 0 0 0 0 0 0 18.587 75.6843 99.8321 99.3317 90.6941 2.13992 100 60.3247

M06223_2.00_shift9 (M06223_2.00)
; oligos_7nt_mkv5_m3 versus M06223_2.00; m=162/241; ncol2=8; w=0; offset=4; strand=D; shift=9; score=0.449424; ---------wTTwATT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 31.5789 7.89474 10.5263 31.5789 100 0 10.5263 c 0 0 0 0 0 0 0 0 0 15.7895 7.89474 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 10.5263 7.89474 0 5.26316 0 0 18.4211 t 0 0 0 0 0 0 0 0 0 42.1053 76.3158 89.4737 63.1579 0 100 71.0526

M03282_2.00_shift9 (HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M03282_2.00 (HOXC5,HOXC6); m=163/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.449174; ---------tTTwATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 3.46535 14.1129 4.43548 32.7536 93.5185 9.57447 0 c 0 0 0 0 0 0 0 0 0 15.3465 0 0 0 0 18.7943 1.94805 g 0 0 0 0 0 0 0 0 0 14.3564 4.43548 14.1129 8.69565 6.48148 0 65.5844 t 0 0 0 0 0 0 0 0 0 66.8317 81.4516 81.4516 58.5507 0 71.6312 32.4675

M04900_2.00_shift8 (HOXA11)
; oligos_7nt_mkv5_m3 versus M04900_2.00 (HOXA11); m=164/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.44906; --------rtTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 37.0588 12.5448 3.8674 2.85714 19.8113 100 2.55102 2.6087 c 0 0 0 0 0 0 0 0 11.7647 17.5627 0 0 0 0 10.7143 3.47826 g 0 0 0 0 0 0 0 0 30.5882 8.96057 2.20994 0 0 0 0 44.6377 t 0 0 0 0 0 0 0 0 20.5882 60.9319 93.9227 97.1429 80.1887 0 86.7347 49.2754

M05124_2.00_shift8 (HOXD13)
; oligos_7nt_mkv5_m3 versus M05124_2.00 (HOXD13); m=165/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.448676; --------gtTTTATT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.8246 15.99 2.63852 1.10957 12.3321 100 3.53569 10.0349 c 0 0 0 0 0 0 0 0 8.77193 3.9347 0.395778 0 0.610501 0 1.33422 0 g 0 0 0 0 0 0 0 0 45.5439 20.3851 2.90237 0 0 0 0 18.7718 t 0 0 0 0 0 0 0 0 23.8596 59.6902 94.0633 98.8904 87.0574 0 95.1301 71.1932

M03284_2.00_shift9 (HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M03284_2.00 (HOXC5,HOXC6); m=166/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.448533; ---------tTTWAyG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 15.2941 0 5.34759 25.4386 83.7438 4.26357 17.4274 c 0 0 0 0 0 0 0 0 0 12.3529 0 1.60428 0 9.35961 65.8915 0 g 0 0 0 0 0 0 0 0 0 16.4706 3.9548 2.13904 0 3.44828 2.71318 70.5394 t 0 0 0 0 0 0 0 0 0 55.8824 96.0452 90.9091 74.5614 3.44828 27.1318 12.0332

M01982_2.00_rc_shift8 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M01982_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1_rc); m=167/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.448356; --------TrTTkayw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 12.9996 29.6601 9.61432 10.0543 10.9388 54.0882 8.3516 31.3657 c 0 0 0 0 0 0 0 0 9.82488 5.25827 10.5197 7.67525 8.77857 8.00941 46.1757 20.8158 g 0 0 0 0 0 0 0 0 7.42549 55.6901 8.11126 10.8917 27.1754 18.0044 9.51104 19.9996 t 0 0 0 0 0 0 0 0 69.75 9.39148 71.7547 71.3788 53.1072 19.8979 35.9617 27.8189

M08264_2.00_shift0 (ZNF250)
; oligos_7nt_mkv5_m3 versus M08264_2.00 (ZNF250); m=168/241; ncol2=15; w=-5; offset=-5; strand=D; shift=0; score=0.44734; yskTGCAmTTTTtky- ; cor=; Ncor= a 6.772 24.1136 23.1186 4.1401 4.843 6.3428 80.6669 49.0867 9.7772 9.2487 6.0683 4.7969 8.8516 22.6415 12.4046 0 c 40.6685 41.3352 3.4385 9.0666 4.3396 84.4506 3.2184 25.6044 3.0187 1.4353 6.9298 11.7032 17.6487 20.6044 34.122 0 g 13.404 28.5453 28.3133 11.2185 86.4813 4.0122 13.1469 7.734 5.2103 1.8085 1.3468 3.1771 14.6437 25.0427 24.4656 0 t 39.1556 6.006 45.1295 75.5747 4.3361 5.1943 2.9678 17.5748 81.9938 87.5075 85.6551 80.3227 58.8561 31.7114 29.0079 0

M09545_2.00_rc_shift8 (FOXA1_rc)
; oligos_7nt_mkv5_m3 versus M09545_2.00_rc (FOXA1_rc); m=169/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.446756; --------TRTTTACw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.1 28.4 0.1 0.1 0.1 84.5 0.1 30.7 c 0 0 0 0 0 0 0 0 0.1 0.1 0.1 0.1 0.1 0.1 88.4 9.6 g 0 0 0 0 0 0 0 0 0.1 71.4 0.1 1.3 6.7 15.3 0.1 0.1 t 0 0 0 0 0 0 0 0 99.7 0.1 99.7 98.5 93.1 0.1 11.4 59.6

M05105_2.00_rc_shift8 (HOXC5,HOXC6,HOXD9_rc)
; oligos_7nt_mkv5_m3 versus M05105_2.00_rc (HOXC5,HOXC6,HOXD9_rc); m=170/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.446246; --------dtTTTAYG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.0438 16.9129 1.65127 0.653214 16.4016 100 0 0 c 0 0 0 0 0 0 0 0 12.5631 8.0946 0 0 0 0 68.3657 0.0938416 g 0 0 0 0 0 0 0 0 30.3041 11.4518 0 0 0 0 0 99.9062 t 0 0 0 0 0 0 0 0 26.089 63.5407 98.3487 99.3468 83.5984 0 31.6343 0

M06476_2.00_shift10 (HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M06476_2.00 (HOXC5,HOXC6); m=171/241; ncol2=7; w=0; offset=5; strand=D; shift=10; score=0.445434; ----------TTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 4.7619 0 23.8095 100 0 14.2857 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14.2857 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52.381 t 0 0 0 0 0 0 0 0 0 0 95.2381 100 76.1905 0 85.7143 33.3333

M04983_2.00_shift8 (HOXA13)
; oligos_7nt_mkv5_m3 versus M04983_2.00 (HOXA13); m=172/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.444448; --------rkTTTATT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.0204 3.58056 0 0 16.3823 100 0 18.209 c 0 0 0 0 0 0 0 0 10.6122 7.92839 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 40.8163 25.8312 2 0 0 0 7.89474 8.65672 t 0 0 0 0 0 0 0 0 17.551 62.6598 98 100 83.6177 0 92.1053 73.1343

M05082_2.00_shift8 (HOXC11)
; oligos_7nt_mkv5_m3 versus M05082_2.00 (HOXC11); m=173/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.444425; --------dtTTwAyk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.3425 18.0534 4.16667 11.5502 34.6369 98.9796 2.1097 4.02299 c 0 0 0 0 0 0 0 0 16.0959 17.1115 1.66667 0 2.7933 0 27.6371 6.89655 g 0 0 0 0 0 0 0 0 26.0274 19.1523 13.3333 0 8.37989 1.02041 8.86076 47.2701 t 0 0 0 0 0 0 0 0 32.5342 45.6829 80.8333 88.4498 54.1899 0 61.3924 41.8103

M03140_2.00_shift9 (HOXD11)
; oligos_7nt_mkv5_m3 versus M03140_2.00 (HOXD11); m=174/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.443358; ---------tTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 9.7561 4.23729 2.6087 24.8366 84.6774 5.88235 2.9703 c 0 0 0 0 0 0 0 0 0 12.8049 4.23729 5.21739 2.61438 3.22581 11.0294 5.44554 g 0 0 0 0 0 0 0 0 0 13.4146 2.54237 0.869565 3.92157 5.64516 5.88235 39.604 t 0 0 0 0 0 0 0 0 0 64.0244 88.9831 91.3043 68.6275 6.45161 77.2059 51.9802

M09543_2.00_rc_shift8 (FOXA1_rc)
; oligos_7nt_mkv5_m3 versus M09543_2.00_rc (FOXA1_rc); m=175/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.442854; --------TGTTTACw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.1 22.3 0.1 0.1 0.1 84.6 0.1 31.3 c 0 0 0 0 0 0 0 0 0.1 0.1 0.1 0.1 0.1 0.1 87 11.1 g 0 0 0 0 0 0 0 0 0.1 77.5 0.1 2.9 10.5 15.2 0.1 0.2 t 0 0 0 0 0 0 0 0 99.7 0.1 99.7 96.9 89.3 0.1 12.8 57.5

M01983_2.00_shift8 (FOXB2)
; oligos_7nt_mkv5_m3 versus M01983_2.00 (FOXB2); m=176/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.442836; --------TrTTtACw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10.2112 36.2449 5.42313 7.09827 5.85288 74.04 5.58926 50.6065 c 0 0 0 0 0 0 0 0 6.70923 5.87261 4.3959 6.61838 7.00717 3.2694 70.1648 12.8595 g 0 0 0 0 0 0 0 0 5.33071 51.9509 3.63523 13.3278 23.2646 15.5585 3.32293 8.19955 t 0 0 0 0 0 0 0 0 77.7489 5.93163 86.5457 72.9556 63.8753 7.1321 20.923 28.3345

M09186_2.00_rc_shift9 (M09186_2.00_rc)
; oligos_7nt_mkv5_m3 versus M09186_2.00_rc; m=177/241; ncol2=8; w=0; offset=4; strand=R; shift=9; score=0.439741; ---------aTTTAtG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 46.595 3.22581 3.22581 6.45161 80.6452 24.7312 20.6093 c 0 0 0 0 0 0 0 0 0 24.3728 0 0 5.37634 0 9.319 0 g 0 0 0 0 0 0 0 0 0 4.83871 9.67742 3.22581 12.9032 16.129 3.22581 79.3907 t 0 0 0 0 0 0 0 0 0 24.1935 87.0968 93.5484 75.2688 3.22581 62.724 0

M09140_2.00_rc_shift9 (CDX1_rc)
; oligos_7nt_mkv5_m3 versus M09140_2.00_rc (CDX1_rc); m=178/241; ncol2=8; w=0; offset=4; strand=R; shift=9; score=0.439741; ---------aTTTAtG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 46.595 3.22581 3.22581 6.45161 80.6452 24.7312 20.6093 c 0 0 0 0 0 0 0 0 0 24.3728 0 0 5.37634 0 9.319 0 g 0 0 0 0 0 0 0 0 0 4.83871 9.67742 3.22581 12.9032 16.129 3.22581 79.3907 t 0 0 0 0 0 0 0 0 0 24.1935 87.0968 93.5484 75.2688 3.22581 62.724 0

M06225_2.00_shift9 (M06225_2.00)
; oligos_7nt_mkv5_m3 versus M06225_2.00; m=179/241; ncol2=8; w=0; offset=4; strand=D; shift=9; score=0.438846; ---------tTTwATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 24.3662 9.01408 12.6761 44.9296 100 0 14.4366 c 0 0 0 0 0 0 0 0 0 17.3239 9.50704 1.05634 0.704225 0 8.4507 1.19718 g 0 0 0 0 0 0 0 0 0 21.831 8.16901 0.422535 3.59155 0 2.32394 27.9577 t 0 0 0 0 0 0 0 0 0 36.4789 73.3099 85.8451 50.7746 0 89.2254 56.4085

M04977_2.00_shift8 (HOXA13)
; oligos_7nt_mkv5_m3 versus M04977_2.00 (HOXA13); m=180/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.438835; --------gTTTTATK ; cor=; Ncor= a 0 0 0 0 0 0 0 0 15.52 6.22627 0 0 0 100 0 0 c 0 0 0 0 0 0 0 0 8.16 2.73349 0 0.104712 1.75077 0 0 0 g 0 0 0 0 0 0 0 0 60.64 18.6029 0 0 0 0 0 29.2285 t 0 0 0 0 0 0 0 0 15.68 72.4374 100 99.8953 98.2492 0 100 70.7715

M05331_2.00_rc_shift8 (HOXC5,HOXC6,HOXC9_rc)
; oligos_7nt_mkv5_m3 versus M05331_2.00_rc (HOXC5,HOXC6,HOXC9_rc); m=181/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.438631; --------rTTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 32.5397 15.7511 0 0 11.8741 99.8651 0 0 c 0 0 0 0 0 0 0 0 14.0982 6.07624 0 0 0 0.070685 78.5256 0 g 0 0 0 0 0 0 0 0 32.411 9.04319 0.0771555 0 0 0.0321295 0 100 t 0 0 0 0 0 0 0 0 20.951 69.1295 99.9228 100 88.1259 0.0321295 21.4744 0

M02524_2.00_rc_shift9 (LIN54_rc)
; oligos_7nt_mkv5_m3 versus M02524_2.00_rc (LIN54_rc); m=182/241; ncol2=9; w=0; offset=4; strand=R; shift=9; score=0.437183; ---------wTTTAAA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 33.2237 0.247525 0.198413 0.165563 82.947 99.5033 99.5033 c 0 0 0 0 0 0 0 0 0 0.328947 0.247525 0.198413 16.7219 0.165563 0.165563 0.165563 g 0 0 0 0 0 0 0 0 0 0.328947 0.247525 0.198413 0.165563 16.7219 0.165563 0.165563 t 0 0 0 0 0 0 0 0 0 66.1184 99.2574 99.4048 82.947 0.165563 0.165563 0.165563

M05335_2.00_shift8 (HOXC10,HOXC6)
; oligos_7nt_mkv5_m3 versus M05335_2.00 (HOXC10,HOXC6); m=183/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.437044; --------gtTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.8 13.3747 0 0 22.471 100 1.51246 3.4 c 0 0 0 0 0 0 0 0 17.5 10.4966 0.575264 0 0.15444 0 5.78292 2.65 g 0 0 0 0 0 0 0 0 43.8 19.6953 3.54746 0 0.15444 0 3.73665 43.95 t 0 0 0 0 0 0 0 0 16.9 56.4334 95.8773 100 77.2201 0 88.968 50

M05289_2.00_rc_shift8 (HOXB9,HOXC5,HOXC6_rc)
; oligos_7nt_mkv5_m3 versus M05289_2.00_rc (HOXB9,HOXC5,HOXC6_rc); m=184/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.434736; --------atTTTAYG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 38.3279 17.2096 0.894266 0 19.9224 99.9457 0 0 c 0 0 0 0 0 0 0 0 14.1694 7.11756 0 0 0.129366 0.0542594 73.9165 0 g 0 0 0 0 0 0 0 0 24.8643 10.4462 2.20936 0 0.517464 0 0.24077 100 t 0 0 0 0 0 0 0 0 22.6384 65.2266 96.8964 100 79.4308 0 25.8427 0

M03176_2.00_rc_shift8 (HOXB13_rc)
; oligos_7nt_mkv5_m3 versus M03176_2.00_rc (HOXB13_rc); m=185/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.434227; --------dtTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.8876 13.6517 0.786749 0.955546 15.2895 99.6656 0.299401 9.90532 c 0 0 0 0 0 0 0 0 7.63423 6.06742 0.0414079 0 0.211864 0 79.3081 0.400583 g 0 0 0 0 0 0 0 0 31.25 13.3146 0.455487 0 0.317797 0.250836 0.0332668 86.8172 t 0 0 0 0 0 0 0 0 34.2282 66.9663 98.7164 99.0445 84.1808 0.083612 20.3593 2.87691

M03142_2.00_rc_shift8 (HOXD13_rc)
; oligos_7nt_mkv5_m3 versus M03142_2.00_rc (HOXD13_rc); m=186/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.433632; --------dTTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.1457 9.0301 0 0.662983 8.92678 99.2274 0 10.6383 c 0 0 0 0 0 0 0 0 6.89655 3.76254 0.221976 0 0.802407 0 82.1005 0.0967118 g 0 0 0 0 0 0 0 0 32.4805 12.0401 0 0 0.100301 0.220751 0 86.9439 t 0 0 0 0 0 0 0 0 29.4772 75.1672 99.778 99.337 90.1705 0.551876 17.8995 2.32108

M05108_2.00_rc_shift8 (HOXC5,HOXC6,HOXD9_rc)
; oligos_7nt_mkv5_m3 versus M05108_2.00_rc (HOXC5,HOXC6,HOXD9_rc); m=187/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.433588; --------rtTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 30.5353 17.9134 0.604267 0.470064 16.5127 99.9938 0 0 c 0 0 0 0 0 0 0 0 14.1081 7.75978 0.0801578 0.0185552 0 0 76.5383 0 g 0 0 0 0 0 0 0 0 33.3396 12.7274 0.147984 0.0371103 0 0 0 99.0089 t 0 0 0 0 0 0 0 0 22.017 61.5994 99.1676 99.4743 83.4873 0.00621736 23.4617 0.991135

M05129_2.00_shift8 (CDX4)
; oligos_7nt_mkv5_m3 versus M05129_2.00 (CDX4); m=188/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.432902; --------gtTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 23.284 13.0973 0 0 0 100 0 0 c 0 0 0 0 0 0 0 0 16.0818 5.88251 0 0 0 0 0 0.10687 g 0 0 0 0 0 0 0 0 49.0157 17.6177 0.24334 0 0 0 0 46.92 t 0 0 0 0 0 0 0 0 11.6185 63.4025 99.7567 100 100 0 100 52.9731

M10527_2.00_rc_shift3 (FOXI2,FOXI3,FOXJ2_rc)
; oligos_7nt_mkv5_m3 versus M10527_2.00_rc (FOXI2,FOXI3,FOXJ2_rc); m=189/241; ncol2=18; w=-2; offset=-2; strand=R; shift=3; score=0.43251; ---wkdwwTrTTTrTt ; cor=; Ncor= a 0 0 0 29.2683 17.0732 26.8293 43.9024 34.1463 0 34.1463 0 0 0 63.4146 0 12.1951 c 0 0 0 14.6341 17.0732 17.0732 4.87805 14.6341 2.43902 0 0 0 0 0 21.9512 17.0732 g 0 0 0 12.1951 26.8293 29.2683 24.3902 21.9512 0 65.8537 0 0 0 36.5854 0 7.31707 t 0 0 0 43.9024 39.0244 26.8293 26.8293 29.2683 97.561 0 100 100 100 0 78.0488 63.4146

M03130_2.00_rc_shift8 (HOXC13_rc)
; oligos_7nt_mkv5_m3 versus M03130_2.00_rc (HOXC13_rc); m=190/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.432197; --------dTTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 28.8217 11.891 0.0794913 0.629426 11.5789 99.6038 0.263852 9.26316 c 0 0 0 0 0 0 0 0 11.7038 5.16241 0 0.157356 0.140351 0.396197 82.9156 0.701754 g 0 0 0 0 0 0 0 0 28.5032 10.0348 0 0.314713 0.0701754 0 0.263852 88.2105 t 0 0 0 0 0 0 0 0 30.9713 72.9118 99.9205 98.8985 88.2105 0 16.5567 1.82456

M04852_2.00_rc_shift7 (FOXD2,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M04852_2.00_rc (FOXD2,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc); m=191/241; ncol2=13; w=0; offset=2; strand=R; shift=7; score=0.432159; -------wTRTTTAYw ; cor=; Ncor= a 0 0 0 0 0 0 0 34.6346 3.27484 27.7014 0.545184 0.176508 0.164794 83.8696 0.0688863 25.9049 c 0 0 0 0 0 0 0 8.59193 1.95863 0 0.413018 0.272786 0.164794 0 68.8289 12.5438 g 0 0 0 0 0 0 0 16.7334 0.830461 72.2986 0 3.35366 9.85768 14.0599 1.15959 20.1501 t 0 0 0 0 0 0 0 40.04 93.9361 0 99.0418 96.197 89.8127 2.07051 29.9426 41.4012

M00389_2.00_shift9 (M00389_2.00)
; oligos_7nt_mkv5_m3 versus M00389_2.00; m=192/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.431711; ---------tTTwAyd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 24.4352 11.2366 12.2987 27.1439 89.4248 6.768 25.2481 c 0 0 0 0 0 0 0 0 0 15.2721 4.21724 4.39072 6.627 0.0504586 35.595 5.41272 g 0 0 0 0 0 0 0 0 0 20.0059 8.66403 1.08274 3.97948 5.89084 2.36838 36.9199 t 0 0 0 0 0 0 0 0 0 40.2869 75.8821 82.2278 62.2496 4.6339 55.2686 32.4192

M01107_2.00_rc_shift4 (M01107_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01107_2.00_rc; m=193/241; ncol2=8; w=-1; offset=-1; strand=R; shift=4; score=0.428691; ----wwTwwtTt---- ; cor=; Ncor= a 0 0 0 0 58.1615 31.742 14.6253 41.2998 41.256 24.0556 12.1077 18.0905 0 0 0 0 c 0 0 0 0 4.82217 4.21075 4.44932 3.03696 3.5247 6.89205 10.9555 17.9105 0 0 0 0 g 0 0 0 0 2.78215 5.04118 4.77193 3.1609 2.77263 3.00527 7.95531 1.48496 0 0 0 0 t 0 0 0 0 34.2342 59.0061 76.1535 52.5023 52.4467 66.0471 68.9816 62.5139 0 0 0 0

M06202_2.00_rc_shift7 (FOXP4_rc)
; oligos_7nt_mkv5_m3 versus M06202_2.00_rc (FOXP4_rc); m=194/241; ncol2=14; w=0; offset=2; strand=R; shift=7; score=0.428256; -------aTTTTTTTr ; cor=; Ncor= a 0 0 0 0 0 0 0 59.0909 0 0 0 0 0 0 0 36.3636 c 0 0 0 0 0 0 0 18.1818 0 0 0 0 0 0 9.09091 18.1818 g 0 0 0 0 0 0 0 4.54545 0 0 0 0 0 0 0 40.9091 t 0 0 0 0 0 0 0 18.1818 100 100 100 100 100 100 90.9091 4.54545

M05072_2.00_shift8 (HOXC13)
; oligos_7nt_mkv5_m3 versus M05072_2.00 (HOXC13); m=195/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.426428; --------gtTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.4685 9.14798 0 0 0 100 0 7.01262 c 0 0 0 0 0 0 0 0 13.6364 3.5426 0 0 0 0 0 0.233754 g 0 0 0 0 0 0 0 0 58.1119 23.1839 0 0 0.832178 0 0 25.9 t 0 0 0 0 0 0 0 0 6.78322 64.1256 100 100 99.1678 0 100 66.8537

M03099_2.00_rc_shift8 (HOXA13_rc)
; oligos_7nt_mkv5_m3 versus M03099_2.00_rc (HOXA13_rc); m=196/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.424282; --------ktTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 22.2096 17.1843 1.20087 3.51648 17.5162 99.5465 0 10.9912 c 0 0 0 0 0 0 0 0 13.2118 6.34921 1.63755 0 0.278035 0 78.9568 0.392542 g 0 0 0 0 0 0 0 0 32.6879 15.873 1.31004 0 0.834106 0.453515 0.989209 86.1629 t 0 0 0 0 0 0 0 0 31.8907 60.5935 95.8515 96.4835 81.3716 0 20.054 2.45339

M03131_2.00_shift8 (HOXC11)
; oligos_7nt_mkv5_m3 versus M03131_2.00 (HOXC11); m=197/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.424036; --------wtTTwAyG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 33.5285 20.3768 4.62469 5.18287 33.9965 99.5145 0.505968 9.0792 c 0 0 0 0 0 0 0 0 13.1538 8.46047 1.54749 0.496232 0.367008 0 66.4764 0.579524 g 0 0 0 0 0 0 0 0 20.9602 11.9394 2.68588 0.147032 0.656751 0.252476 0.40218 82.4855 t 0 0 0 0 0 0 0 0 32.3575 59.2233 91.1419 94.1739 64.9797 0.233055 32.6155 7.85576

M09112_2.00_rc_shift8 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M09112_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXS1_rc); m=198/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.423325; --------TGTTTAyw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2.2 7.6 0 0.2 0.4 77 0.6 54.4 c 0 0 0 0 0 0 0 0 0.2 0.4 0.2 0.4 0.6 7.6 55.8 11 g 0 0 0 0 0 0 0 0 0.4 91 0 2 10.8 1.4 5.8 8.2 t 0 0 0 0 0 0 0 0 97.2 1 99.8 97.4 88.2 14 37.8 26.4

M05116_2.00_rc_shift8 (HOXC6,HOXD10_rc)
; oligos_7nt_mkv5_m3 versus M05116_2.00_rc (HOXC6,HOXD10_rc); m=199/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.423103; --------dTTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 30.0538 11.9383 0.149317 0 7.35148 96.8515 0 0 c 0 0 0 0 0 0 0 0 10.3983 4.29649 0 0 0.35764 3.14846 78.4761 0 g 0 0 0 0 0 0 0 0 31.2164 7.59265 0.767918 0 0 0 0.0168947 99.3158 t 0 0 0 0 0 0 0 0 28.3315 76.1725 99.0828 100 92.2909 0 21.507 0.684199

M03136_2.00_rc_shift8 (HOXC12_rc)
; oligos_7nt_mkv5_m3 versus M03136_2.00_rc (HOXC12_rc); m=200/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.422908; --------dTTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.2776 9.00822 0.668357 0.578168 11.3576 99.9302 0 3.48962 c 0 0 0 0 0 0 0 0 8.6572 4.70526 0 0.0462535 0.10269 0.0232558 91.9144 0.256904 g 0 0 0 0 0 0 0 0 26.5069 11.1247 0.299608 0 0.287533 0.0465116 0.0427807 91.9931 t 0 0 0 0 0 0 0 0 33.5583 75.1618 99.032 99.3756 88.2522 0 8.04278 4.26033

M00505_2.00_shift9 (M00505_2.00)
; oligos_7nt_mkv5_m3 versus M00505_2.00; m=201/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.422571; ---------ttTwAyd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 24.2902 13.7233 14.5926 28.3836 84.3774 7.49952 26.3896 c 0 0 0 0 0 0 0 0 0 17.4628 7.83888 5.58739 9.35407 0.0370792 37.1454 7.79099 g 0 0 0 0 0 0 0 0 0 20.9068 11.8118 1.52274 5.67353 10.0272 3.6871 34.2254 t 0 0 0 0 0 0 0 0 0 37.3403 66.6261 78.2973 56.5888 5.55834 51.668 31.594

M02945_2.00_shift0 (ONECUT3)
; oligos_7nt_mkv5_m3 versus M02945_2.00 (ONECUT3); m=202/241; ncol2=14; w=-5; offset=-5; strand=D; shift=0; score=0.422258; wtTATyGATTTTtt-- ; cor=; Ncor= a 38.0694 19.4408 5.13622 99.0874 0.359653 0.180003 0.0818197 97.608 0.179241 0.862069 16.0954 11.3583 11.6612 13.6678 0 0 c 10.4095 6.85855 2.78398 0.114081 0.147131 34.8552 0.0490918 0.224755 0.668079 1.62835 1.4764 6.44243 18.7664 22.8289 0 0 g 20.9012 14.1612 1.5632 0.0977836 0.0980873 0.327279 99.4927 1.65356 0.081473 0.446999 2.28052 3.54463 6.23355 16.8092 0 0 t 30.62 59.5395 90.5166 0.700782 99.3951 64.6375 0.37637 0.513726 99.0712 97.0626 80.1476 78.6546 63.3388 46.6941 0 0

M03780_2.00_shift8 (M03780_2.00)
; oligos_7nt_mkv5_m3 versus M03780_2.00; m=203/241; ncol2=12; w=0; offset=3; strand=D; shift=8; score=0.421857; --------gtTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 23.9344 13.6467 0.507361 0.687736 0.29192 100 0 1.17695 c 0 0 0 0 0 0 0 0 19.524 6.4377 0.143182 0 0 0 0.250854 0.120834 g 0 0 0 0 0 0 0 0 33.6429 16.1242 0.476235 0.0125043 0 0 0.144241 48.8544 t 0 0 0 0 0 0 0 0 22.8987 63.7915 98.8732 99.2998 99.7081 0 99.6049 49.8478

M03207_2.00_rc_shift8 (HOXD12_rc)
; oligos_7nt_mkv5_m3 versus M03207_2.00_rc (HOXD12_rc); m=204/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.420541; --------kTTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.8099 16.5363 3.10515 0 13.9535 99.2017 0 0 c 0 0 0 0 0 0 0 0 5.62865 2.50391 0.42343 0.218978 0.125707 0 86.7386 0.363636 g 0 0 0 0 0 0 0 0 35.2339 9.6505 0 0 0 0.725689 0.126904 99.4182 t 0 0 0 0 0 0 0 0 39.3275 71.3093 96.4714 99.781 85.9208 0.0725689 13.1345 0.218182

M05399_2.00_shift8 (HOXA10,HOXC6)
; oligos_7nt_mkv5_m3 versus M05399_2.00 (HOXA10,HOXC6); m=205/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.420227; --------gtTTWATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.3421 16.918 5.76692 4.71366 26.8568 100 0.0395257 1.35268 c 0 0 0 0 0 0 0 0 18.4004 19.9149 0 0 0.132626 0 13.083 6.02558 g 0 0 0 0 0 0 0 0 41.1003 21.3457 7.60913 0 1.2931 0 1.3834 39.4245 t 0 0 0 0 0 0 0 0 20.1572 41.8213 86.6239 95.2863 71.7175 0 85.4941 53.1972

M05018_2.00_shift8 (CDX1)
; oligos_7nt_mkv5_m3 versus M05018_2.00 (CDX1); m=206/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.419981; --------gtTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.1558 10.7769 0 0 0 100 0 0 c 0 0 0 0 0 0 0 0 14.1759 5.39322 0.0999106 0 0.0526094 0 0 0.147167 g 0 0 0 0 0 0 0 0 56.2878 23.0946 0 0 0 0 0 61.9416 t 0 0 0 0 0 0 0 0 9.38043 60.7353 99.9001 100 99.9474 0 100 37.9113

M05131_2.00_shift8 (CDX4)
; oligos_7nt_mkv5_m3 versus M05131_2.00 (CDX4); m=207/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.419974; --------gtTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 17.1171 12.117 0.875 3.71747 0 100 0 4.24403 c 0 0 0 0 0 0 0 0 17.6319 10.585 0 0 0 0 0 0.132626 g 0 0 0 0 0 0 0 0 55.3411 23.1894 2 0 1.52091 0 0 44.0981 t 0 0 0 0 0 0 0 0 9.90991 54.1086 97.125 96.2825 98.4791 0 100 51.5252

M05394_2.00_rc_shift8 (HOXA10,HOXC6_rc)
; oligos_7nt_mkv5_m3 versus M05394_2.00_rc (HOXA10,HOXC6_rc); m=208/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.419511; --------dTTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 29.0947 13.8229 0.503914 0 9.7756 99.991 0 0 c 0 0 0 0 0 0 0 0 11.4226 4.86577 0 0.0180848 0 0 76.9397 0 g 0 0 0 0 0 0 0 0 31.9436 9.95741 0 0 0 0.00904323 0 100 t 0 0 0 0 0 0 0 0 27.5391 71.3539 99.4961 99.9819 90.2244 0 23.0603 0

M02092_2.00_shift9 (HOXB13)
; oligos_7nt_mkv5_m3 versus M02092_2.00 (HOXB13); m=209/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.41949; ---------tTTwAyd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 24.4335 11.9073 12.6395 28.824 84.122 6.1093 27.3557 c 0 0 0 0 0 0 0 0 0 16.7091 7.66871 8.47254 8.50971 0.0408548 34.1176 6.48132 g 0 0 0 0 0 0 0 0 0 21.6706 11.2138 6.15233 6.89784 10.7217 2.38646 33.4123 t 0 0 0 0 0 0 0 0 0 37.1868 69.2102 72.7356 55.7684 5.11546 57.3867 32.7507

M00410_2.00_shift9 (HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M00410_2.00 (HOXC5,HOXC6); m=210/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.418284; ---------ttTwAyk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 23.4744 14.2094 10.5763 35.4051 74.0176 4.56811 13.6557 c 0 0 0 0 0 0 0 0 0 16.8763 9.43005 8.92285 7.00663 7.8798 26.8187 10.9589 g 0 0 0 0 0 0 0 0 0 16.8763 10.7392 6.16332 5.2955 8.2838 8.92716 38.6348 t 0 0 0 0 0 0 0 0 0 42.7731 65.6214 74.3375 52.2927 9.81883 59.6861 36.7506

M00293_2.00_shift9 (HOXD13)
; oligos_7nt_mkv5_m3 versus M00293_2.00 (HOXD13); m=211/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.418245; ---------wtTwAyd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 25.0172 15.0367 16.1218 27.456 85.6643 6.94433 26.9658 c 0 0 0 0 0 0 0 0 0 17.8065 7.61786 6.29762 10.9417 1.09465 34.0533 8.45341 g 0 0 0 0 0 0 0 0 0 21.3183 11.9472 3.12731 6.31282 9.30393 4.51735 32.9361 t 0 0 0 0 0 0 0 0 0 35.8579 65.3982 74.4533 55.2895 3.93707 54.485 31.6447

M02520_2.00_shift9 (LIN54)
; oligos_7nt_mkv5_m3 versus M02520_2.00 (LIN54); m=212/241; ncol2=8; w=0; offset=4; strand=D; shift=9; score=0.417995; ---------aTTTAAA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 49.7525 0.198413 0.198413 0.198413 79.5635 99.4048 99.4048 c 0 0 0 0 0 0 0 0 0 0.247525 0.198413 0.198413 20.0397 0.198413 0.198413 0.198413 g 0 0 0 0 0 0 0 0 0 25 0.198413 0.198413 0.198413 20.0397 0.198413 0.198413 t 0 0 0 0 0 0 0 0 0 25 99.4048 99.4048 79.5635 0.198413 0.198413 0.198413

M09580_2.00_shift9 (M09580_2.00)
; oligos_7nt_mkv5_m3 versus M09580_2.00; m=213/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.417757; ---------wTTTATG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.4 0.1 4.8 0.7 99.6 0.9 0.7 c 0 0 0 0 0 0 0 0 0 12.1 0.3 0.4 1.2 0.2 24.5 2.8 g 0 0 0 0 0 0 0 0 0 12.9 4.2 0.1 0.1 0.1 2.1 75.6 t 0 0 0 0 0 0 0 0 0 44.6 95.4 94.7 98 0.1 72.5 20.9

M02651_2.00_rc_shift10 (ARID3B,ARID3C_rc)
; oligos_7nt_mkv5_m3 versus M02651_2.00_rc (ARID3B,ARID3C_rc); m=214/241; ncol2=6; w=0; offset=5; strand=R; shift=10; score=0.415891; ----------TTTrAT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 22.2222 0 0 62.963 100 0 c 0 0 0 0 0 0 0 0 0 0 3.7037 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 33.3333 0 0 t 0 0 0 0 0 0 0 0 0 0 74.0741 100 100 3.7037 0 100

M00508_2.00_shift9 (M00508_2.00)
; oligos_7nt_mkv5_m3 versus M00508_2.00; m=215/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.413283; ---------wtTwAyk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 25.448 17.4738 16.2033 29.035 73.5952 7.07332 15.3114 c 0 0 0 0 0 0 0 0 0 17.7545 10.1828 6.99515 7.0887 3.59154 38.719 15.3114 g 0 0 0 0 0 0 0 0 0 21.0444 13.7454 6.32947 12.5347 11.0075 10.5522 37.2853 t 0 0 0 0 0 0 0 0 0 35.7531 58.598 70.4721 51.3416 11.8057 43.6555 32.0918

M05401_2.00_shift8 (HOXA10,HOXC6)
; oligos_7nt_mkv5_m3 versus M05401_2.00 (HOXA10,HOXC6); m=216/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.413139; --------rtTTWATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.3114 17.0041 3.73906 4.20025 30.0304 98.9868 0 4.82315 c 0 0 0 0 0 0 0 0 20.0623 16.5917 0 0 1.00304 0 8.76777 3.55994 g 0 0 0 0 0 0 0 0 38.2117 24.2782 6.88146 0.466695 0.668693 0 2.48815 40.0092 t 0 0 0 0 0 0 0 0 16.4146 42.126 89.3795 95.3331 68.2979 1.01322 88.7441 51.6077

M02526_2.00_rc_shift9 (LIN54_rc)
; oligos_7nt_mkv5_m3 versus M02526_2.00_rc (LIN54_rc); m=217/241; ncol2=8; w=0; offset=4; strand=R; shift=9; score=0.412858; ---------wTTTraa ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 35.529 11.4105 12.6833 4.288 32.0018 65.0057 59.4649 c 0 0 0 0 0 0 0 0 0 10.5946 8.53807 3.59766 23.0075 8.54881 8.97528 11.1941 g 0 0 0 0 0 0 0 0 0 24.7877 6.01667 3.85851 0.0422488 52.2371 11.0726 15.1105 t 0 0 0 0 0 0 0 0 0 29.0887 74.0348 79.8606 72.6622 7.21233 14.9465 14.2305

M00297_2.00_shift9 (HOXD13)
; oligos_7nt_mkv5_m3 versus M00297_2.00 (HOXD13); m=218/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.411448; ---------ttTwrta ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 24.7742 15.9546 10.9389 29.07 63.9446 6.16869 46.006 c 0 0 0 0 0 0 0 0 0 16.4414 7.31368 3.39506 7.76562 2.99821 13.3229 15.9391 g 0 0 0 0 0 0 0 0 0 22.1935 12.6765 6.43867 8.58233 28.1632 17.107 17.7924 t 0 0 0 0 0 0 0 0 0 36.5909 64.0553 79.2274 54.5821 4.89403 63.4014 20.2625

M09161_2.00_shift9 (HOXC5,HOXC6,HOXC9)
; oligos_7nt_mkv5_m3 versus M09161_2.00 (HOXC5,HOXC6,HOXC9); m=219/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.410833; ---------wTTtATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 26 4 0.8 22.4 96 1.2 5.2 c 0 0 0 0 0 0 0 0 0 15.6 2.8 1.2 12.6 2.4 2.4 0.4 g 0 0 0 0 0 0 0 0 0 7.4 4.6 1.6 3.2 1.2 1.8 45.4 t 0 0 0 0 0 0 0 0 0 51 88.6 96.4 61.8 0.4 94.6 49

M09674_2.00_shift9 (M09674_2.00)
; oligos_7nt_mkv5_m3 versus M09674_2.00; m=220/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.410791; ---------tTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 22.328 8.22898 9.08945 14.9577 80.5999 0.968992 13.0954 c 0 0 0 0 0 0 0 0 0 20.6828 2.32558 0.968992 6.0972 0.968992 0.968992 0.968992 g 0 0 0 0 0 0 0 0 0 8.5486 2.32558 3.53309 1.74419 6.87239 0.968992 52.4448 t 0 0 0 0 0 0 0 0 0 48.4407 87.1199 86.4085 77.201 11.5587 97.093 33.4908

M03208_2.00_rc_shift8 (HOXD12_rc)
; oligos_7nt_mkv5_m3 versus M03208_2.00_rc (HOXD12_rc); m=221/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.410383; --------wtTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.2139 19.0248 5.44508 1.29668 19.9091 99.7379 0.173085 5.73192 c 0 0 0 0 0 0 0 0 15.2916 10.2311 0 0 0.0826105 0.262055 82.3453 3.57143 g 0 0 0 0 0 0 0 0 23.9096 17.1082 4.45076 0 1.40438 0 0 83.9065 t 0 0 0 0 0 0 0 0 29.5849 53.6359 90.1042 98.7033 78.6039 0 17.4816 6.79012

M01245_2.00_shift9 (HOXC6)
; oligos_7nt_mkv5_m3 versus M01245_2.00 (HOXC6); m=222/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.410202; ---------ttTwATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 20.4823 15.1097 14.2891 34.1776 85.2398 2.89001 11.4242 c 0 0 0 0 0 0 0 0 0 15.6358 5.96158 5.00031 4.76629 2.81642 14.1719 8.80862 g 0 0 0 0 0 0 0 0 0 16.4374 11.8857 4.80424 5.26757 6.65566 6.89819 32.9744 t 0 0 0 0 0 0 0 0 0 47.4445 67.0431 75.9063 55.7886 5.28815 76.0399 46.7929

M00538_2.00_shift9 (M00538_2.00)
; oligos_7nt_mkv5_m3 versus M00538_2.00; m=223/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.409251; ---------wttwayk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 26.5831 19.3737 16.2686 29.7385 67.7597 7.64973 13.9819 c 0 0 0 0 0 0 0 0 0 17.8192 10.8473 7.76196 8.52023 7.35932 37.5124 15.2986 g 0 0 0 0 0 0 0 0 0 21.1212 12.7295 8.6645 12.7107 11.2006 12.1177 38.0067 t 0 0 0 0 0 0 0 0 0 34.4765 57.0495 67.305 49.0305 13.6804 42.7202 32.7127

M05118_2.00_rc_shift8 (HOXC6,HOXD10_rc)
; oligos_7nt_mkv5_m3 versus M05118_2.00_rc (HOXC6,HOXD10_rc); m=224/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.409162; --------dTTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.105 12.2901 0.187617 0 4.51067 99.6009 0 0 c 0 0 0 0 0 0 0 0 9.57402 3.43928 0.291849 0 0 0 95.0491 0 g 0 0 0 0 0 0 0 0 30.8098 6.97637 0.667084 0.210438 0 0.399076 0 100 t 0 0 0 0 0 0 0 0 28.5112 77.2942 98.8535 99.7896 95.4893 0 4.95089 0

M03781_2.00_shift8 (M03781_2.00)
; oligos_7nt_mkv5_m3 versus M03781_2.00; m=225/241; ncol2=12; w=0; offset=3; strand=D; shift=8; score=0.408689; --------rtTTTATK ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.9348 19.5558 0.311947 0.595017 0.335445 99.9719 0 1.32636 c 0 0 0 0 0 0 0 0 19.6119 6.85995 0.0372474 0 0.0372717 0 7.67238 0.590618 g 0 0 0 0 0 0 0 0 30.3858 20.5144 0.0884626 0 0 0.0280505 0 72.1701 t 0 0 0 0 0 0 0 0 23.0676 53.0699 99.5623 99.405 99.6273 0 92.3276 25.9129

M03772_2.00_rc_shift8 (HOXC5,HOXC6_rc)
; oligos_7nt_mkv5_m3 versus M03772_2.00_rc (HOXC5,HOXC6_rc); m=226/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.407824; --------dtTTTAyG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 34.053 22.0741 1.69682 0.650142 20.5006 99.741 0 0 c 0 0 0 0 0 0 0 0 10.5083 7.1787 0.323518 0.0744955 0 0 67.3539 0.0672359 g 0 0 0 0 0 0 0 0 30.0355 11.9846 1.34689 0.155763 0.184137 0.14311 0 98.4065 t 0 0 0 0 0 0 0 0 25.4031 58.7626 96.6328 99.1196 79.3153 0.115851 32.6461 1.52626

M04982_2.00_rc_shift8 (HOXA13_rc)
; oligos_7nt_mkv5_m3 versus M04982_2.00_rc (HOXA13_rc); m=227/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.407727; --------dtTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 29.4964 20.1018 0.477646 0.771754 11.0613 99.7285 0.0342877 6.17573 c 0 0 0 0 0 0 0 0 10.8886 4.89816 0.248376 0.0192938 0.34459 0 88.1536 0 g 0 0 0 0 0 0 0 0 33.0935 12.6576 1.03172 0 0 0.271528 0 92.5819 t 0 0 0 0 0 0 0 0 26.5215 62.3424 98.2423 99.209 88.5941 0 11.8121 1.24235

M08131_2.00_shift9 (CDX2)
; oligos_7nt_mkv5_m3 versus M08131_2.00 (CDX2); m=228/241; ncol2=11; w=0; offset=4; strand=D; shift=9; score=0.407156; ---------tTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 7.57671 0 0 0 100 0 4.25798 c 0 0 0 0 0 0 0 0 0 19.5992 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 9.39261 0 0 0 0 0 52.0977 t 0 0 0 0 0 0 0 0 0 63.4314 100 100 100 0 100 43.6443

M06194_2.00_rc_shift8 (FOXB2_rc)
; oligos_7nt_mkv5_m3 versus M06194_2.00_rc (FOXB2_rc); m=229/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.406723; --------TGTTTryy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11.1111 18.5185 0 0 0 48.1481 14.8148 22.2222 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48.1481 25.9259 g 0 0 0 0 0 0 0 0 0 81.4815 0 0 3.7037 51.8519 7.40741 11.1111 t 0 0 0 0 0 0 0 0 88.8889 0 100 100 96.2963 0 29.6296 40.7407

M08200_2.00_rc_shift8 (FOXB2_rc)
; oligos_7nt_mkv5_m3 versus M08200_2.00_rc (FOXB2_rc); m=230/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.406723; --------TGTTTryy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11.1111 18.5185 0 0 0 48.1481 14.8148 22.2222 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48.1481 25.9259 g 0 0 0 0 0 0 0 0 0 81.4815 0 0 3.7037 51.8519 7.40741 11.1111 t 0 0 0 0 0 0 0 0 88.8889 0 100 100 96.2963 0 29.6296 40.7407

M06473_2.00_rc_shift8 (FOXB2_rc)
; oligos_7nt_mkv5_m3 versus M06473_2.00_rc (FOXB2_rc); m=231/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.406723; --------TGTTTryy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11.1111 18.5185 0 0 0 48.1481 14.8148 22.2222 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48.1481 25.9259 g 0 0 0 0 0 0 0 0 0 81.4815 0 0 3.7037 51.8519 7.40741 11.1111 t 0 0 0 0 0 0 0 0 88.8889 0 100 100 96.2963 0 29.6296 40.7407

M03133_2.00_rc_shift8 (HOXC11_rc)
; oligos_7nt_mkv5_m3 versus M03133_2.00_rc (HOXC11_rc); m=232/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.405515; --------dtTTWACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 30.122 19.6655 0.86546 1.67866 27.1377 99.5146 0 3.73049 c 0 0 0 0 0 0 0 0 15.6098 7.07045 0.668765 0 1.00361 0 81.2149 0.456795 g 0 0 0 0 0 0 0 0 25.5285 10.9225 1.69158 0 0.240867 0 0 93.6429 t 0 0 0 0 0 0 0 0 28.7398 62.3416 96.7742 98.3213 71.6178 0.485437 18.7851 2.16978

M00390_2.00_shift9 (M00390_2.00)
; oligos_7nt_mkv5_m3 versus M00390_2.00; m=233/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.405365; ---------ttTwAyk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 24.3261 15.0809 13.2509 37.5039 78.6702 4.99344 14.4111 c 0 0 0 0 0 0 0 0 0 16.6357 9.61601 7.12825 4.78002 2.25977 38.0205 8.31446 g 0 0 0 0 0 0 0 0 0 20.1167 9.71266 3.36715 5.0251 7.06578 7.6762 47.3703 t 0 0 0 0 0 0 0 0 0 38.9216 65.5904 76.2537 52.691 12.0043 49.3099 29.9041

M07961_2.00_rc_shift8 (FOXA1_rc)
; oligos_7nt_mkv5_m3 versus M07961_2.00_rc (FOXA1_rc); m=234/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.404247; --------TRTTTACw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2.449 27.3469 0 0.2041 0 76.1224 1.0204 41.0204 c 0 0 0 0 0 0 0 0 0.4082 0.816301 0 0 0.2041 0 86.9388 10.6122 g 0 0 0 0 0 0 0 0 0 71.8368 0 3.0612 20.6122 21.6327 0 0 t 0 0 0 0 0 0 0 0 97.1428 0 100 96.7347 79.1837 2.2449 12.0408 48.3673

M00554_2.00_shift9 (HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M00554_2.00 (HOXC5,HOXC6); m=235/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.40275; ---------wtTwAyk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 25.1496 14.8997 12.2081 38.1649 88.2245 4.81214 16.5526 c 0 0 0 0 0 0 0 0 0 17.7226 7.32536 5.27038 3.7883 0.0298935 26.8735 8.72809 g 0 0 0 0 0 0 0 0 0 19.9822 13.6173 5.65252 7.04217 6.04895 9.69046 40.7129 t 0 0 0 0 0 0 0 0 0 37.1455 64.1576 76.869 51.0046 5.69668 58.6239 34.0063

M02942_2.00_shift0 (ONECUT2)
; oligos_7nt_mkv5_m3 versus M02942_2.00 (ONECUT2); m=236/241; ncol2=14; w=-5; offset=-5; strand=D; shift=0; score=0.402699; wwTATyGATTTttt-- ; cor=; Ncor= a 40.5383 26.057 7.39538 98.5904 0.915522 0 0.209293 98.9596 0.249688 0.792393 18.5185 14.428 12.9154 15.3911 0 0 c 9.96636 7.45381 3.78788 0 0.0416146 62.0301 0 0.374532 0.749064 4.51664 2.58326 10.6716 21.666 22.6661 0 0 g 22.1194 18.0395 3.0303 0.580431 0.0832293 0.668338 99.5396 0.332917 0.0416146 0.475436 4.8864 7.22823 8.07741 18.7132 0 0 t 27.3759 48.4497 85.7864 0.829187 98.9596 37.3016 0.251151 0.332917 98.9596 94.2155 74.0118 67.6722 57.3412 43.2296 0 0

M00750_2.00_rc_shift3 (M00750_2.00_rc)
; oligos_7nt_mkv5_m3 versus M00750_2.00_rc; m=237/241; ncol2=8; w=-2; offset=-2; strand=R; shift=3; score=0.401987; ---aTtTwTTT----- ; cor=; Ncor= a 0 0 0 66.6667 15.3846 20 13.3333 60 13.3333 6.66667 8.33333 0 0 0 0 0 c 0 0 0 8.33333 7.69231 6.66667 6.66667 6.66667 6.66667 6.66667 8.33333 0 0 0 0 0 g 0 0 0 8.33333 7.69231 6.66667 6.66667 6.66667 6.66667 6.66667 8.33333 0 0 0 0 0 t 0 0 0 16.6667 69.2308 66.6667 73.3333 26.6667 73.3333 80 75 0 0 0 0 0

M05203_2.00_rc_shift8 (HOXB13_rc)
; oligos_7nt_mkv5_m3 versus M05203_2.00_rc (HOXB13_rc); m=238/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.400924; --------dTTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 30.929 14.7394 0 0 2.31467 99.7813 0 0 c 0 0 0 0 0 0 0 0 11.8215 3.22992 0 0 0 0.177065 99.9009 0.0365211 g 0 0 0 0 0 0 0 0 30.9238 8.00525 0 0 0 0 0.0990667 99.9635 t 0 0 0 0 0 0 0 0 26.3257 74.0254 100 100 97.6853 0.0416623 0 0

M05122_2.00_shift8 (HOXD13)
; oligos_7nt_mkv5_m3 versus M05122_2.00 (HOXD13); m=239/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.400776; --------GkTTTATK ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.543478 0 0 0 0 98.3957 0 0 c 0 0 0 0 0 0 0 0 0.815217 2.06349 0 3.15789 0 0 1.34048 0 g 0 0 0 0 0 0 0 0 82.337 39.5238 16.5533 0 0 0 0 27.5591 t 0 0 0 0 0 0 0 0 16.3043 58.4127 83.4467 96.8421 100 1.60428 98.6595 72.4409

M00239_2.00_rc_shift2 (GFI1B_rc)
; oligos_7nt_mkv5_m3 versus M00239_2.00_rc (GFI1B_rc); m=240/241; ncol2=11; w=-3; offset=-3; strand=R; shift=2; score=0.400519; --cyCWGATTTmt--- ; cor=; Ncor= a 0 0 22.4599 19.8505 2.43281 69.9754 0.0187568 99.9437 0.0187568 0.0187568 2.5589 34.8939 22.5859 0 0 0 c 0 0 32.6204 40.8074 72.5158 0.0187568 0.0187568 0.0187568 0.0187568 0.0187568 2.5589 25.0171 22.5859 0 0 0 g 0 0 22.4599 9.81583 22.6185 0.0187568 99.9437 0.0187568 0.0187568 0.0187568 2.5589 15.2029 22.5859 0 0 0 t 0 0 22.4599 29.5263 2.43281 29.9871 0.0187568 0.0187568 99.9437 99.9437 92.3233 24.8861 32.2422 0 0 0

M02943_2.00_shift0 (ONECUT1)
; oligos_7nt_mkv5_m3 versus M02943_2.00 (ONECUT1); m=241/241; ncol2=14; w=-5; offset=-5; strand=D; shift=0; score=0.40005; wwTATyGATTTttt-- ; cor=; Ncor= a 35.5083 25.4795 8.75432 99.8611 0.327332 0.025243 0.0377929 99.6346 0.188513 0.323315 20.7494 15.7417 15.0607 15.0986 0 0 c 11.3935 7.73736 3.86442 0 0.0251794 52.884 0.113379 0.0881945 0.301621 4.69405 2.51924 10.8308 23.6975 24.4815 0 0 g 19.3728 17.5531 2.01857 0.0505114 0.0881279 0.164079 99.6221 0.125992 0.125676 0.287391 4.28728 6.92903 9.01619 17.3875 0 0 t 33.7253 49.23 85.3627 0.088395 99.5594 46.9267 0.226757 0.151191 99.3842 94.6952 72.4441 66.4985 52.2256 43.0324 0 0