/var/www/html/rsat/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab 
 compare-matrices  -v 1 -format transfac -file $RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/peak-motifs_motifs_discovered.tf -distinct -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab
 Program version       	1.118
 Quick mode 
 Input files
	file2 	$RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/peak-motifs_motifs_discovered.tf
	file1 	$RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/peak-motifs_motifs_discovered.tf
 Output files
	match_table_html	$RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/peak-motifs_motifs_disco_compa.html
	html_index   	$RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/peak-motifs_motifs_disco_compa_index.html
	alignments_1ton_html	$RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/peak-motifs_motifs_disco_compa_alignments_1ton.html
	match_table_txt	$RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab
	alignments_1ton	$RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/peak-motifs_motifs_disco_compa_alignments_1ton.tab
	prefix       	$RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/peak-motifs_motifs_disco_compa
 Matrices
	file1	20 matrices	$RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/peak-motifs_motifs_discovered.tf
		file1	1	11	14847
		file1	2	17	4250
		file1	3	13	11953
		file1	4	13	15495
		file1	5	10	15970
		file1	6	10	8140
		file1	7	12	13874
		file1	8	11	16801
		file1	9	11	25731
		file1	10	10	8792
		file1	11	15	21066
		...	10 more matrices
	file2	20 matrices	$RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/peak-motifs_motifs_discovered.tf
		file2		1		11		14847
		file2		2		17		4250
		file2		3		13		11953
		file2		4		13		15495
		file2		5		10		15970
		file2		6		10		8140
		file2		7		12		13874
		file2		8		11		16801
		file2		9		11		25731
		file2		10		10		8792
		file2		11		15		21066
		...	10 more matrices
 Column content
	1	id1          	Identifier of the first matrix
	2	id2          	Identifier of the second matrix
	3	name1        	Name of the first matrix
	4	name2        	Name of the second matrix
	5	cor          	Pearson coefficient of correlation between frequency matrices
	6	Ncor         	Normalized correlation. Ncor = cor * Wr
	7	w1           	Width of the first matrix
	8	w2           	Width of the second matrix
	9	w            	Alignment length (number of overlapping columns between matrix 1 and matrix 2, as a function of the offset)
	10	W            	Total alignment length (overlapping + non-overlapping columns). W = w1 + w2 - w
	11	Wr           	Relative alignment length (overlap divided by the total alignemnt length). Wr = w/W
	12	wr1          	Alignment length relative to the width of the first matrix. wr1 = w/w1
	13	wr2          	Alignment length relative to the width of the second matrix. wr2 = w/w2
	14	strand       	"strand", i.e. orientation of matrix 2 relative to matrix 1 (D=direct;  R=reverse)
	15	offset       	shift of the second matrix relative to the first matrix (negative:left; positive: right)
id1 id2 name1 name2 cor Ncor w1 w2 w W Wr wr1 wr2 strand offset
positions_7nt_m5 positions_7nt_m5 positions_7nt_m5 positions_7nt_m5 1.000 1.000 12 12 12 12 1.0000 1.0000 1.0000 D 0
oligos_7nt_mkv5_m3 oligos_7nt_mkv5_m3 oligos_7nt_mkv5_m3 oligos_7nt_mkv5_m3 1.000 1.000 11 11 11 11 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv4_m5 oligos_6nt_mkv4_m5 oligos_6nt_mkv4_m5 oligos_6nt_mkv4_m5 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 D 0
positions_6nt_m3 positions_6nt_m3 positions_6nt_m3 positions_6nt_m3 1.000 1.000 11 11 11 11 1.0000 1.0000 1.0000 D 0
positions_6nt_m5 positions_6nt_m5 positions_6nt_m5 positions_6nt_m5 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 D 0
positions_6nt_m1 positions_6nt_m1 positions_6nt_m1 positions_6nt_m1 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 D 0
oligos_7nt_mkv5_m4 oligos_7nt_mkv5_m4 oligos_7nt_mkv5_m4 oligos_7nt_mkv5_m4 1.000 1.000 12 12 12 12 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv4_m2 oligos_6nt_mkv4_m2 oligos_6nt_mkv4_m2 oligos_6nt_mkv4_m2 1.000 1.000 17 17 17 17 1.0000 1.0000 1.0000 D 0
positions_6nt_m2 positions_6nt_m2 positions_6nt_m2 positions_6nt_m2 1.000 1.000 12 12 12 12 1.0000 1.0000 1.0000 D 0
oligos_7nt_mkv5_m2 oligos_7nt_mkv5_m2 oligos_7nt_mkv5_m2 oligos_7nt_mkv5_m2 1.000 1.000 12 12 12 12 1.0000 1.0000 1.0000 D 0
oligos_7nt_mkv5_m1 oligos_7nt_mkv5_m1 oligos_7nt_mkv5_m1 oligos_7nt_mkv5_m1 1.000 1.000 15 15 15 15 1.0000 1.0000 1.0000 D 0
positions_6nt_m4 positions_6nt_m4 positions_6nt_m4 positions_6nt_m4 1.000 1.000 11 11 11 11 1.0000 1.0000 1.0000 D 0
positions_7nt_m4 positions_7nt_m4 positions_7nt_m4 positions_7nt_m4 1.000 1.000 12 12 12 12 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv4_m3 oligos_6nt_mkv4_m3 oligos_6nt_mkv4_m3 oligos_6nt_mkv4_m3 1.000 1.000 13 13 13 13 1.0000 1.0000 1.0000 D 0
positions_7nt_m2 positions_7nt_m2 positions_7nt_m2 positions_7nt_m2 1.000 1.000 12 12 12 12 1.0000 1.0000 1.0000 D 0
positions_7nt_m1 positions_7nt_m1 positions_7nt_m1 positions_7nt_m1 1.000 1.000 11 11 11 11 1.0000 1.0000 1.0000 D 0
positions_7nt_m3 positions_7nt_m3 positions_7nt_m3 positions_7nt_m3 1.000 1.000 11 11 11 11 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv4_m1 oligos_6nt_mkv4_m1 oligos_6nt_mkv4_m1 oligos_6nt_mkv4_m1 1.000 1.000 11 11 11 11 1.0000 1.0000 1.0000 D 0
oligos_7nt_mkv5_m5 oligos_7nt_mkv5_m5 oligos_7nt_mkv5_m5 oligos_7nt_mkv5_m5 1.000 1.000 12 12 12 12 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv4_m4 oligos_6nt_mkv4_m4 oligos_6nt_mkv4_m4 oligos_6nt_mkv4_m4 1.000 1.000 13 13 13 13 1.0000 1.0000 1.0000 D 0
positions_7nt_m1 positions_6nt_m2 positions_7nt_m1 positions_6nt_m2 0.966 0.885 11 12 11 12 0.9167 1.0000 0.9167 R 0
positions_6nt_m2 positions_7nt_m1 positions_6nt_m2 positions_7nt_m1 0.966 0.885 12 11 11 12 0.9167 0.9167 1.0000 R 1
oligos_7nt_mkv5_m4 positions_7nt_m1 oligos_7nt_mkv5_m4 positions_7nt_m1 0.962 0.882 12 11 11 12 0.9167 0.9167 1.0000 D 1
positions_7nt_m1 oligos_7nt_mkv5_m4 positions_7nt_m1 oligos_7nt_mkv5_m4 0.962 0.882 11 12 11 12 0.9167 1.0000 0.9167 D -1
oligos_6nt_mkv4_m4 oligos_6nt_mkv4_m3 oligos_6nt_mkv4_m4 oligos_6nt_mkv4_m3 0.866 0.866 13 13 13 13 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv4_m3 oligos_6nt_mkv4_m4 oligos_6nt_mkv4_m3 oligos_6nt_mkv4_m4 0.866 0.866 13 13 13 13 1.0000 1.0000 1.0000 D 0
positions_6nt_m3 positions_6nt_m4 positions_6nt_m3 positions_6nt_m4 0.865 0.865 11 11 11 11 1.0000 1.0000 1.0000 D 0
positions_6nt_m4 positions_6nt_m3 positions_6nt_m4 positions_6nt_m3 0.865 0.865 11 11 11 11 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv4_m4 oligos_7nt_mkv5_m1 oligos_6nt_mkv4_m4 oligos_7nt_mkv5_m1 0.959 0.831 13 15 13 15 0.8667 1.0000 0.8667 D -2
oligos_7nt_mkv5_m1 oligos_6nt_mkv4_m4 oligos_7nt_mkv5_m1 oligos_6nt_mkv4_m4 0.959 0.831 15 13 13 15 0.8667 0.8667 1.0000 D 2
positions_7nt_m1 positions_7nt_m3 positions_7nt_m1 positions_7nt_m3 0.820 0.820 11 11 11 11 1.0000 1.0000 1.0000 D 0
positions_7nt_m3 positions_7nt_m1 positions_7nt_m3 positions_7nt_m1 0.820 0.820 11 11 11 11 1.0000 1.0000 1.0000 D 0
positions_7nt_m3 positions_6nt_m2 positions_7nt_m3 positions_6nt_m2 0.860 0.788 11 12 11 12 0.9167 1.0000 0.9167 R 0
positions_6nt_m2 positions_7nt_m3 positions_6nt_m2 positions_7nt_m3 0.860 0.788 12 11 11 12 0.9167 0.9167 1.0000 R 1
oligos_7nt_mkv5_m4 positions_6nt_m2 oligos_7nt_mkv5_m4 positions_6nt_m2 0.922 0.780 12 12 11 13 0.8462 0.9167 0.9167 R 1
positions_6nt_m2 oligos_7nt_mkv5_m4 positions_6nt_m2 oligos_7nt_mkv5_m4 0.922 0.780 12 12 11 13 0.8462 0.9167 0.9167 R 1
oligos_7nt_mkv5_m2 oligos_6nt_mkv4_m4 oligos_7nt_mkv5_m2 oligos_6nt_mkv4_m4 0.842 0.777 12 13 12 13 0.9231 1.0000 0.9231 R -1
oligos_6nt_mkv4_m4 oligos_7nt_mkv5_m2 oligos_6nt_mkv4_m4 oligos_7nt_mkv5_m2 0.842 0.777 13 12 12 13 0.9231 0.9231 1.0000 R 0
oligos_6nt_mkv4_m3 oligos_7nt_mkv5_m1 oligos_6nt_mkv4_m3 oligos_7nt_mkv5_m1 0.867 0.752 13 15 13 15 0.8667 1.0000 0.8667 D -2
oligos_7nt_mkv5_m1 oligos_6nt_mkv4_m3 oligos_7nt_mkv5_m1 oligos_6nt_mkv4_m3 0.867 0.752 15 13 13 15 0.8667 0.8667 1.0000 D 2
positions_7nt_m3 oligos_7nt_mkv5_m4 positions_7nt_m3 oligos_7nt_mkv5_m4 0.812 0.744 11 12 11 12 0.9167 1.0000 0.9167 D -1
oligos_7nt_mkv5_m4 positions_7nt_m3 oligos_7nt_mkv5_m4 positions_7nt_m3 0.812 0.744 12 11 11 12 0.9167 0.9167 1.0000 D 1
oligos_6nt_mkv4_m3 oligos_7nt_mkv5_m2 oligos_6nt_mkv4_m3 oligos_7nt_mkv5_m2 0.737 0.680 13 12 12 13 0.9231 0.9231 1.0000 R 0
oligos_7nt_mkv5_m2 oligos_6nt_mkv4_m3 oligos_7nt_mkv5_m2 oligos_6nt_mkv4_m3 0.737 0.680 12 13 12 13 0.9231 1.0000 0.9231 R -1
oligos_6nt_mkv4_m3 positions_7nt_m3 oligos_6nt_mkv4_m3 positions_7nt_m3 0.787 0.666 13 11 11 13 0.8462 0.8462 1.0000 D 0
positions_7nt_m3 oligos_6nt_mkv4_m3 positions_7nt_m3 oligos_6nt_mkv4_m3 0.787 0.666 11 13 11 13 0.8462 1.0000 0.8462 D 0
oligos_7nt_mkv5_m4 oligos_6nt_mkv4_m3 oligos_7nt_mkv5_m4 oligos_6nt_mkv4_m3 0.717 0.662 12 13 12 13 0.9231 1.0000 0.9231 D -1
oligos_6nt_mkv4_m3 oligos_7nt_mkv5_m4 oligos_6nt_mkv4_m3 oligos_7nt_mkv5_m4 0.717 0.662 13 12 12 13 0.9231 0.9231 1.0000 D 1
oligos_7nt_mkv5_m2 oligos_7nt_mkv5_m1 oligos_7nt_mkv5_m2 oligos_7nt_mkv5_m1 0.815 0.652 12 15 12 15 0.8000 1.0000 0.8000 R -1
oligos_7nt_mkv5_m1 oligos_7nt_mkv5_m2 oligos_7nt_mkv5_m1 oligos_7nt_mkv5_m2 0.815 0.652 15 12 12 15 0.8000 0.8000 1.0000 R 2
oligos_6nt_mkv4_m4 positions_7nt_m3 oligos_6nt_mkv4_m4 positions_7nt_m3 0.769 0.650 13 11 11 13 0.8462 0.8462 1.0000 D 0
positions_7nt_m3 oligos_6nt_mkv4_m4 positions_7nt_m3 oligos_6nt_mkv4_m4 0.769 0.650 11 13 11 13 0.8462 1.0000 0.8462 D 0
oligos_6nt_mkv4_m4 oligos_7nt_mkv5_m5 oligos_6nt_mkv4_m4 oligos_7nt_mkv5_m5 0.703 0.649 13 12 12 13 0.9231 0.9231 1.0000 D 0
oligos_7nt_mkv5_m5 oligos_6nt_mkv4_m4 oligos_7nt_mkv5_m5 oligos_6nt_mkv4_m4 0.703 0.649 12 13 12 13 0.9231 1.0000 0.9231 D 0
oligos_6nt_mkv4_m3 positions_7nt_m1 oligos_6nt_mkv4_m3 positions_7nt_m1 0.744 0.630 13 11 11 13 0.8462 0.8462 1.0000 D 2
positions_7nt_m1 oligos_6nt_mkv4_m3 positions_7nt_m1 oligos_6nt_mkv4_m3 0.744 0.630 11 13 11 13 0.8462 1.0000 0.8462 D -2
positions_7nt_m3 oligos_7nt_mkv5_m1 positions_7nt_m3 oligos_7nt_mkv5_m1 0.766 0.562 11 15 11 15 0.7333 1.0000 0.7333 D -2
oligos_7nt_mkv5_m1 positions_7nt_m3 oligos_7nt_mkv5_m1 positions_7nt_m3 0.766 0.562 15 11 11 15 0.7333 0.7333 1.0000 D 2
positions_7nt_m3 oligos_7nt_mkv5_m2 positions_7nt_m3 oligos_7nt_mkv5_m2 0.730 0.561 11 12 10 13 0.7692 0.9091 0.8333 R -2
oligos_7nt_mkv5_m2 positions_7nt_m3 oligos_7nt_mkv5_m2 positions_7nt_m3 0.730 0.561 12 11 10 13 0.7692 0.8333 0.9091 R -1
positions_6nt_m2 oligos_6nt_mkv4_m3 positions_6nt_m2 oligos_6nt_mkv4_m3 0.708 0.556 12 13 11 14 0.7857 0.9167 0.8462 R 1
oligos_6nt_mkv4_m3 positions_6nt_m2 oligos_6nt_mkv4_m3 positions_6nt_m2 0.708 0.556 13 12 11 14 0.7857 0.8462 0.9167 R 2
positions_6nt_m4 oligos_7nt_mkv5_m3 positions_6nt_m4 oligos_7nt_mkv5_m3 0.779 0.539 11 11 9 13 0.6923 0.8182 0.8182 R 2
oligos_7nt_mkv5_m3 positions_6nt_m4 oligos_7nt_mkv5_m3 positions_6nt_m4 0.779 0.539 11 11 9 13 0.6923 0.8182 0.8182 R 2
oligos_7nt_mkv5_m3 positions_6nt_m3 oligos_7nt_mkv5_m3 positions_6nt_m3 0.768 0.532 11 11 9 13 0.6923 0.8182 0.8182 R 2
positions_6nt_m3 oligos_7nt_mkv5_m3 positions_6nt_m3 oligos_7nt_mkv5_m3 0.768 0.532 11 11 9 13 0.6923 0.8182 0.8182 R 2
oligos_7nt_mkv5_m2 oligos_6nt_mkv4_m5 oligos_7nt_mkv5_m2 oligos_6nt_mkv4_m5 0.703 0.487 12 10 9 13 0.6923 0.7500 0.9000 R 3
oligos_6nt_mkv4_m5 oligos_7nt_mkv5_m2 oligos_6nt_mkv4_m5 oligos_7nt_mkv5_m2 0.703 0.487 10 12 9 13 0.6923 0.9000 0.7500 R 1
oligos_6nt_mkv4_m5 oligos_7nt_mkv5_m1 oligos_6nt_mkv4_m5 oligos_7nt_mkv5_m1 0.713 0.475 10 15 10 15 0.6667 1.0000 0.6667 D -5
oligos_7nt_mkv5_m1 oligos_6nt_mkv4_m5 oligos_7nt_mkv5_m1 oligos_6nt_mkv4_m5 0.713 0.475 15 10 10 15 0.6667 0.6667 1.0000 D 5
positions_7nt_m3 oligos_6nt_mkv4_m5 positions_7nt_m3 oligos_6nt_mkv4_m5 0.819 0.409 11 10 7 14 0.5000 0.6364 0.7000 D -3
oligos_6nt_mkv4_m5 positions_7nt_m3 oligos_6nt_mkv4_m5 positions_7nt_m3 0.819 0.409 10 11 7 14 0.5000 0.7000 0.6364 D 3
oligos_7nt_mkv5_m4 positions_6nt_m1 oligos_7nt_mkv5_m4 positions_6nt_m1 0.707 0.404 12 10 8 14 0.5714 0.6667 0.8000 R 4
positions_6nt_m1 oligos_7nt_mkv5_m4 positions_6nt_m1 oligos_7nt_mkv5_m4 0.707 0.404 10 12 8 14 0.5714 0.8000 0.6667 R 2 
 Host name	rsat
 Job started	2026-01-04.220158
 Job done	2026-01-04.220243
 Seconds	6.68
	user	6.68
	system	1.45
	cuser	34.05
;	csystem	2.96