One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/positions_7nt_m3/peak-motifs_positions_7nt_m3.tf -format2 tf -file2 $RSAT/public_html/motif_databases/cisBP2/cisBP_Homo_sapiens_2019.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/positions_7nt_m3/peak-motifs_positions_7nt_m3_vs_db_cisBP_Homo_sapiens

One-to-n matrix alignment; reference matrix: positions_7nt_m3_shift8 ; 155 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
positions_7nt_m3_shift8 (positions_7nt_m3)
; positions_7nt_m3; m=0 (reference); ncol1=11; shift=8; ncol=19; --------csCTCCCCCgs ; Alignment reference a 0 0 0 0 0 0 0 0 1897 2563 64 86 293 300 258 733 68 3148 1946 c 0 0 0 0 0 0 0 0 6412 5906 14069 0 14209 13356 13001 12415 13819 3111 6267 g 0 0 0 0 0 0 0 0 3582 3899 450 601 79 804 1177 1327 677 5991 4161 t 0 0 0 0 0 0 0 0 2713 2236 21 13917 23 144 168 129 40 2354 2230

M08358_2.00_shift8 (ZNF467)
; positions_7nt_m3 versus M08358_2.00 (ZNF467); m=1/154; ncol2=12; w=0; offset=0; strand=D; shift=8; score=0.825576; --------CCCTCCCCCyC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1.11257 0.850785 0.065445 0.065445 0.065445 1.37435 0.065445 0.065445 1.37435 18.6518 2.94503 c 0 0 0 0 0 0 0 0 74.411 87.7618 99.8037 0.065445 85.6675 93.5209 89.3325 84.3586 73.6257 34.8822 79.6466 g 0 0 0 0 0 0 0 0 4.25393 0.065445 0.065445 0.850785 3.46859 0.065445 1.11257 0.065445 1.63613 10.2749 5.03927 t 0 0 0 0 0 0 0 0 20.2225 11.322 0.065445 99.0183 10.7984 5.03927 9.48953 15.5105 23.3639 36.1911 12.3691

M00249_2.00_shift9 (WT1)
; positions_7nt_m3 versus M00249_2.00 (WT1); m=2/154; ncol2=11; w=0; offset=1; strand=D; shift=9; score=0.790666; ---------mCyCCCCCrc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.7654 9.76681 2.48942 0.022935 0.022935 0.022935 9.70563 0.022935 25.8716 15.2561 c 0 0 0 0 0 0 0 0 0 29.4673 70.6996 32.473 99.9312 99.9312 99.9312 90.2485 99.9312 15.4144 54.2316 g 0 0 0 0 0 0 0 0 0 19.8837 9.76681 2.48942 0.022935 0.022935 0.022935 0.022935 0.022935 53.5748 15.2561 t 0 0 0 0 0 0 0 0 0 19.8837 9.76681 62.5481 0.022935 0.022935 0.022935 0.022935 0.022935 5.13927 15.2561

M00139_2.00_shift9 (M00139_2.00)
; positions_7nt_m3 versus M00139_2.00; m=3/154; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.762727; ---------cmwCCCCCmh ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 17.3942 26.206 44.9152 3.32464 2.67398 1.01422 1.97029 2.08507 36.1848 29.3413 c 0 0 0 0 0 0 0 0 0 56.0438 41.9294 5.39124 92.8851 95.9251 96.9428 95.4098 95.0881 40.3922 35.4809 g 0 0 0 0 0 0 0 0 0 13.0154 12.2557 15.4063 2.29645 0.721493 0.138639 0.801061 1.20298 5.63298 9.66968 t 0 0 0 0 0 0 0 0 0 13.5466 19.609 34.2873 1.49386 0.679476 1.90431 1.81881 1.62386 17.79 25.5081

M08107_2.00_rc_shift8 (E2F6_rc)
; positions_7nt_m3 versus M08107_2.00_rc (E2F6_rc); m=4/154; ncol2=11; w=0; offset=0; strand=R; shift=8; score= 0.7393; --------byyTCCCGCCy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 13.4567 6.52884 0 0 0 0 0 4.75154 0 0 16.6485 c 0 0 0 0 0 0 0 0 32.9706 41.1679 38.8466 0 98.2227 100 99.7461 0 100 69.2419 50.9975 g 0 0 0 0 0 0 0 0 25.6075 16.4672 0 0 1.05187 0 0 70.8741 0 14.7262 2.9017 t 0 0 0 0 0 0 0 0 27.9652 35.8361 61.1534 100 0.725426 0 0.253899 24.3743 0 16.0319 29.4523

M08349_2.00_shift10 (EGR3)
; positions_7nt_m3 versus M08349_2.00 (EGR3); m=5/154; ncol2=9; w=0; offset=2; strand=D; shift=10; score=0.720903; ----------CkCCYCCdC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0647668 21.8264 0.0647668 0.0647668 0.0647668 18.1995 0.0647668 29.5984 0.0647668 c 0 0 0 0 0 0 0 0 0 0 99.8057 0.0647668 99.8057 99.8057 73.6399 81.671 99.8057 0.0647668 75.7124 g 0 0 0 0 0 0 0 0 0 0 0.0647668 49.0285 0.0647668 0.0647668 0.0647668 0.0647668 0.0647668 40.2202 24.158 t 0 0 0 0 0 0 0 0 0 0 0.0647668 29.0803 0.0647668 0.0647668 26.2306 0.0647668 0.0647668 30.1166 0.0647668

M00133_2.00_shift8 (M00133_2.00)
; positions_7nt_m3 versus M00133_2.00; m=6/154; ncol2=10; w=0; offset=0; strand=D; shift=8; score=0.709935; --------cmCgCCCmcy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.0214 42.3407 2.97602 15.6909 0.0767376 0.0263797 0.0433909 29.6789 10.202 20.7575 0 c 0 0 0 0 0 0 0 0 45.8577 50.1866 90.9753 1.40928 98.7545 99.967 83.3039 56.2855 54.1945 29.7523 0 g 0 0 0 0 0 0 0 0 11.8882 2.87413 2.48578 66.892 0.00389772 0.00304224 0.00127157 1.35045 11.9721 14.923 0 t 0 0 0 0 0 0 0 0 21.2327 4.59858 3.56295 16.0079 1.1649 0 16.6514 12.6852 23.6315 34.5672 0

M08109_2.00_rc_shift8 (E2F4_rc)
; positions_7nt_m3 versus M08109_2.00_rc (E2F4_rc); m=7/154; ncol2=11; w=0; offset=0; strand=R; shift=8; score=0.700071; --------yyyTCCCGCsc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.4888 5.16507 0 0 0 0 0 0 0 0 20.6603 c 0 0 0 0 0 0 0 0 32.8009 38.3387 33.2801 3.99361 97.0181 86.9542 100 0 99.4143 64.59 45.1544 g 0 0 0 0 0 0 0 0 20.9265 18.5836 0 0 2.18317 11.6081 0 100 0.585729 27.1565 19.7018 t 0 0 0 0 0 0 0 0 26.7838 37.9127 66.7199 96.0064 0.798722 1.4377 0 0 0 8.25346 14.4835

M02891_2.00_shift9 (ZNF740)
; positions_7nt_m3 versus M02891_2.00 (ZNF740); m=8/154; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.691214; ---------mCCCCCCCAc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 27.3826 7.78087 6.20484 0.948509 0.902527 0.361991 2.33996 4.5264 68.0266 12.4568 c 0 0 0 0 0 0 0 0 0 46.2576 85.391 91.4152 97.1545 97.0668 97.3303 94.9669 90.1509 18.5642 61.8815 g 0 0 0 0 0 0 0 0 0 17.7592 1.07185 0.297493 0.361337 0.541516 0.950226 1.6777 0.963956 3.60531 5.29344 t 0 0 0 0 0 0 0 0 0 8.60065 5.75625 2.08245 1.53568 1.48917 1.35747 1.01545 4.35876 9.80392 20.3682

M08979_2.00_shift8 (M08979_2.00)
; positions_7nt_m3 versus M08979_2.00; m=9/154; ncol2=10; w=0; offset=0; strand=D; shift=8; score=0.689932; --------CcCwCCChsc- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 4.4 22.6 0.4 58.6 1.4 1.2 1.4 29 13 16.8 0 c 0 0 0 0 0 0 0 0 81.4 66 98.8 1 80.4 98.2 97.2 34.4 47.8 51.4 0 g 0 0 0 0 0 0 0 0 2.4 1.6 0.2 3 16.2 0.4 0.2 0.6 25.8 13.8 0 t 0 0 0 0 0 0 0 0 11.8 9.8 0.6 37.4 2 0.2 1.2 36 13.4 18 0

M08866_2.00_shift8 (SALL4)
; positions_7nt_m3 versus M08866_2.00 (SALL4); m=10/154; ncol2=10; w=0; offset=0; strand=D; shift=8; score=0.689932; --------CcCwCCChsc- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 4.4 22.6 0.4 58.6 1.4 1.2 1.4 29 13 16.8 0 c 0 0 0 0 0 0 0 0 81.4 66 98.8 1 80.4 98.2 97.2 34.4 47.8 51.4 0 g 0 0 0 0 0 0 0 0 2.4 1.6 0.2 3 16.2 0.4 0.2 0.6 25.8 13.8 0 t 0 0 0 0 0 0 0 0 11.8 9.8 0.6 37.4 2 0.2 1.2 36 13.4 18 0

M09038_2.00_rc_shift9 (M09038_2.00_rc)
; positions_7nt_m3 versus M09038_2.00_rc; m=11/154; ncol2=10; w=0; offset=1; strand=R; shift=9; score=0.688093; ---------syTCCCGCsc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 5.62249 0.200803 0.401606 0.200803 0.803213 0.401606 0.803213 1.60643 0.200803 13.0522 c 0 0 0 0 0 0 0 0 0 47.1888 47.1888 0.803213 92.1687 96.1847 94.5783 0 95.3815 61.8474 57.0281 g 0 0 0 0 0 0 0 0 0 26.3052 8.43373 0.401606 1.00402 2.61044 3.01205 91.7671 2.40964 25.7028 11.245 t 0 0 0 0 0 0 0 0 0 20.8835 44.1767 98.3936 6.62651 0.401606 2.00803 7.42972 0.60241 12.249 18.6747

M00776_2.00_shift9 (M00776_2.00)
; positions_7nt_m3 versus M00776_2.00; m=12/154; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.687765; ---------mcgCCCmCgy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 28.0343 15.9193 23.9553 8.00057 1.93417 3.06438 62.2598 2.16924 21.9875 14.4571 c 0 0 0 0 0 0 0 0 0 40.1824 56.1223 8.72499 89.078 91.8062 79.0315 27.6968 92.2383 7.03203 46.117 g 0 0 0 0 0 0 0 0 0 12.2243 9.27695 49.2146 0.00744296 5.58274 1.29673 5.37263 2.25777 55.1731 13.3455 t 0 0 0 0 0 0 0 0 0 19.5589 18.6815 18.1051 2.91396 0.67684 16.6074 4.67074 3.33468 15.8074 26.0804

M04509_2.00_shift6 (ZNF281)
; positions_7nt_m3 versus M04509_2.00 (ZNF281); m=13/154; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.687662; ------gCCCCTCCCCCa- ; cor=; Ncor= a 0 0 0 0 0 0 11.2647 2.15385 4.33229 0.138504 6.92892 2.06233 0 1.67286 3.41696 3.75881 5.06993 67.5349 0 c 0 0 0 0 0 0 14.7892 92.2198 93.9705 98.2918 91.0148 0 99.8126 98.3271 91.263 81.9107 92.5699 23.0233 0 g 0 0 0 0 0 0 61.2647 0.835165 1.25056 0 0.49173 0 0.0937207 0 1.25433 5.91229 0 1.67442 0 t 0 0 0 0 0 0 12.6814 4.79121 0.446628 1.56971 1.5646 97.9377 0.0937207 0 4.06574 8.41817 2.36014 7.76744 0

M08302_2.00_shift10 (EGR2)
; positions_7nt_m3 versus M08302_2.00 (EGR2); m=14/154; ncol2=9; w=0; offset=2; strand=D; shift=10; score=0.687446; ----------CgCCCmCdC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0739645 23.1509 0.0739645 0.0739645 0.0739645 37.9438 0.0739645 28.4763 0.0739645 c 0 0 0 0 0 0 0 0 0 0 99.7781 0.0739645 99.7781 99.7781 84.0976 61.9083 99.7781 0.0739645 89.1272 g 0 0 0 0 0 0 0 0 0 0 0.0739645 55.6953 0.0739645 0.0739645 0.0739645 0.0739645 0.0739645 45.932 10.7249 t 0 0 0 0 0 0 0 0 0 0 0.0739645 21.0799 0.0739645 0.0739645 15.7544 0.0739645 0.0739645 25.5178 0.0739645

M02892_2.00_shift9 (ZNF740)
; positions_7nt_m3 versus M02892_2.00 (ZNF740); m=15/154; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.685097; ---------cCCCCCCCAc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 19.8051 2.29439 1.13194 1.38249 5.04422 0.612944 0.899119 1.61807 72.652 7.5187 c 0 0 0 0 0 0 0 0 0 57.0798 95.976 96.1797 96.3843 89.0599 98.035 97.7882 91.6568 7.02739 67.8055 g 0 0 0 0 0 0 0 0 0 16.0537 0.352983 1.04351 1.08118 2.86603 0.757166 0.143859 1.1967 7.08083 3.35411 t 0 0 0 0 0 0 0 0 0 7.06142 1.37663 1.64485 1.15207 3.02981 0.594916 1.16885 5.5284 13.2398 21.3217

M02935_2.00_shift9 (M02935_2.00)
; positions_7nt_m3 versus M02935_2.00; m=16/154; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.68249; ---------mCCCCCCCac ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.3121 18.5904 16.9679 4.701 3.83543 6.26236 7.45322 11.3504 67.0956 16.2721 c 0 0 0 0 0 0 0 0 0 34.1858 70.7181 77.5219 91.9115 92.7127 87.6401 84.3324 77.3865 10.4971 53.3507 g 0 0 0 0 0 0 0 0 0 22.1888 2.79255 0.670554 0.829589 0.27894 1.35135 3.8059 3.11409 6.98965 7.0626 t 0 0 0 0 0 0 0 0 0 13.3133 7.89894 4.83965 2.5579 3.17294 4.74621 4.4085 8.14901 15.4176 23.3146

M09515_2.00_shift8 (M09515_2.00)
; positions_7nt_m3 versus M09515_2.00; m=17/154; ncol2=12; w=0; offset=0; strand=D; shift=8; score=0.676809; --------cmCrCCCACrc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.4 32.9 1.4 25.3 0.1 0.1 0.1 86.1 0.1 25.5 2.6 c 0 0 0 0 0 0 0 0 35.7 51.3 95.3 0.1 99.7 99.7 94.3 13.7 99.7 3.5 67.8 g 0 0 0 0 0 0 0 0 19.2 6.6 0.1 58.7 0.1 0.1 0.1 0.1 0.1 55.2 18.2 t 0 0 0 0 0 0 0 0 24.8 9.2 3.2 15.9 0.1 0.1 5.5 0.1 0.1 15.8 11.4

M04510_2.00_shift6 (ZNF281)
; positions_7nt_m3 versus M04510_2.00 (ZNF281); m=18/154; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.673884; ------rCCCmTCCCCCr- ; cor=; Ncor= a 0 0 0 0 0 0 26.988 15.4793 12.0417 1.77179 33.1018 15.3637 4.31528 5.19077 15.1746 16.4008 6.88917 27.1103 0 c 0 0 0 0 0 0 6.55738 70.9328 80.4375 96.1729 59.0519 0.0777907 89.432 89.8181 71.7682 69.4927 86.564 11.3775 0 g 0 0 0 0 0 0 58.4781 7.34484 3.875 1.25207 4.72007 6.06768 3.941 3.54925 7.16939 6.30937 2.48181 49.3761 0 t 0 0 0 0 0 0 7.97651 6.24311 3.64583 0.803213 3.12628 78.4909 2.31176 1.44188 5.88782 7.7971 4.06504 12.136 0

M04438_2.00_shift8 (EGR1)
; positions_7nt_m3 versus M04438_2.00 (EGR1); m=19/154; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.671748; --------cmCrCCCmCgc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.812 28.5357 7.63283 29.7004 2.48685 4.75973 4.16748 54.8634 0.170648 22.7166 8.27459 c 0 0 0 0 0 0 0 0 41.1735 47.1176 78.0531 7.48997 94.1416 90.0915 77.0299 32.5111 95.9776 13.8829 66.0792 g 0 0 0 0 0 0 0 0 16.2306 10.4727 2.55749 46.4378 0.908656 2.746 4.40227 6.24303 0 42.2063 8.17388 t 0 0 0 0 0 0 0 0 22.7838 13.8739 11.7565 16.3718 2.46294 2.40275 14.4003 6.38239 3.85178 21.1943 17.4723

M00230_2.00_shift9 (EGR2)
; positions_7nt_m3 versus M00230_2.00 (EGR2); m=20/154; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.668049; ---------mcrCCCmccy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.4696 12.7214 30.8306 6.07116 0.756708 7.19322 39.7106 8.59421 16.1831 12.8811 c 0 0 0 0 0 0 0 0 0 37.5897 53.1588 7.45219 86.795 95.7003 69.626 41.7466 67.4299 63.6863 47.7397 g 0 0 0 0 0 0 0 0 0 12.5125 11.1706 43.7507 0.00921935 3.22593 2.41848 9.03963 6.49536 5.77749 10.1326 t 0 0 0 0 0 0 0 0 0 19.4283 22.9492 17.9665 7.12457 0.317024 20.7623 9.50311 17.4805 14.3531 29.2466

M04628_2.00_shift7 (ZNF460)
; positions_7nt_m3 versus M04628_2.00 (ZNF460); m=21/154; ncol2=13; w=-1; offset=-1; strand=D; shift=7; score=0.653969; -------caaCgCCCCCCs ; cor=; Ncor= a 0 0 0 0 0 0 0 15.4613 40.5896 59.0674 9.85222 9.84802 3.35946 5.41761 3.78198 7.64263 5.35308 2.81532 23.9674 c 0 0 0 0 0 0 0 47.8803 24.8677 23.9378 78.9163 20.6687 89.6976 90.4063 89.099 86.2217 91.2301 90.2027 26.925 g 0 0 0 0 0 0 0 23.5661 19.9546 9.63731 3.94089 48.693 1.34378 0.790068 4.33815 3.12164 1.93622 2.81532 40.8465 t 0 0 0 0 0 0 0 13.0923 14.5881 7.35751 7.29064 20.7903 5.5991 3.386 2.78087 3.01399 1.48064 4.16667 8.26109

M08906_2.00_shift6 (ZNF281)
; positions_7nt_m3 versus M08906_2.00 (ZNF281); m=22/154; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score=0.650439; ------yCCCCTCCCCCwc ; cor=; Ncor= a 0 0 0 0 0 0 9.12863 2.48963 1.65975 1.03734 12.8631 12.6556 0.414938 0.622407 0.622407 1.65975 1.03734 47.0954 14.1079 c 0 0 0 0 0 0 27.1784 87.3444 94.1909 97.9253 74.0664 0.207469 96.473 97.9253 89.6266 97.5104 96.888 17.4274 50.8299 g 0 0 0 0 0 0 24.8963 1.65975 0.622407 0 0.207469 10.9959 0.414938 0.414938 1.65975 0.414938 0.829876 7.67635 18.0498 t 0 0 0 0 0 0 38.7967 8.50622 3.52697 1.03734 12.8631 76.1411 2.6971 1.03734 8.09129 0.414938 1.24481 27.8008 17.0124

M01917_2.00_rc_shift11 (M01917_2.00_rc)
; positions_7nt_m3 versus M01917_2.00_rc; m=23/154; ncol2=8; w=0; offset=3; strand=R; shift=11; score=0.650024; -----------tCCCCCCc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 10.8757 6.35513 3.18153 0.801333 3.97493 2.38813 7.38283 7.34593 c 0 0 0 0 0 0 0 0 0 0 0 23.9135 78.5544 81.728 97.596 93.629 87.2818 68.0187 62.3716 g 0 0 0 0 0 0 0 0 0 0 0 17.3946 7.94192 8.73532 1.59473 2.38813 8.73532 20.4933 17.434 t 0 0 0 0 0 0 0 0 0 0 0 47.8162 7.14852 6.35513 0.00793399 0.00793399 1.59473 4.10521 12.8485

M08999_2.00_shift7 (M08999_2.00)
; positions_7nt_m3 versus M08999_2.00; m=24/154; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.649147; -------CCCCTCCCCCac ; cor=; Ncor= a 0 0 0 0 0 0 0 1.8 1 0 8.4 16.6 0 0 0 0 0 62.8 18.4 c 0 0 0 0 0 0 0 95.8 98.6 99.8 86.6 0.4 100 100 98.8 99.2 100 23.6 61.6 g 0 0 0 0 0 0 0 0.6 0 0 0 3.8 0 0 0 0 0 2.8 6.8 t 0 0 0 0 0 0 0 1.8 0.4 0.2 5 79.2 0 0 1.2 0.8 0 10.8 13.2

M09523_2.00_rc_shift8 (E2F6_rc)
; positions_7nt_m3 versus M09523_2.00_rc (E2F6_rc); m=25/154; ncol2=10; w=0; offset=0; strand=R; shift=8; score=0.648649; --------syyTCCCGCb- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.3 16.4 7.5 0.1 2.6 11.1 2.9 10.4 0.4 5.1 0 c 0 0 0 0 0 0 0 0 30 28.9 26.2 5 86.7 76.8 81.9 2.7 92.2 43.4 0 g 0 0 0 0 0 0 0 0 25.7 17.5 4.6 1.2 6.3 6.1 14.2 73.2 4 26.2 0 t 0 0 0 0 0 0 0 0 20 37.2 61.7 93.7 4.4 6 1 13.7 3.4 25.4 0

M07717_2.00_shift8 (ZNF441)
; positions_7nt_m3 versus M07717_2.00 (ZNF441); m=26/154; ncol2=12; w=0; offset=0; strand=D; shift=8; score=0.648277; --------rrCTCCGcCyC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.6892 47.4099 0.112613 0.112613 0.112613 0.112613 0.112613 0.563063 0.112613 0.563063 0.112613 c 0 0 0 0 0 0 0 0 18.5811 1.46396 99.6622 21.2838 99.6622 99.6622 0.112613 65.4279 80.7432 56.4189 69.9324 g 0 0 0 0 0 0 0 0 48.3108 51.0135 0.112613 0.112613 0.112613 0.112613 99.6622 10.9234 7.77027 6.41892 20.3829 t 0 0 0 0 0 0 0 0 6.41892 0.112613 0.112613 78.491 0.112613 0.112613 0.112613 23.0856 11.3739 36.5991 9.57207

M08025_2.00_shift7 (M08025_2.00)
; positions_7nt_m3 versus M08025_2.00; m=27/154; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.648269; -------CCCCTCCCCCmc ; cor=; Ncor= a 0 0 0 0 0 0 0 2.8571 0 0 6.66669 22.8571 0 0.9524 0.9524 3.8095 5.7143 59.0477 24.7619 c 0 0 0 0 0 0 0 94.2857 82.8571 100 80.9523 0.9524 100 98.0952 93.3333 93.3333 94.2857 27.619 45.7143 g 0 0 0 0 0 0 0 1.9048 0 0 0 4.7619 0 0 0.9524 0.9524 0 2.8571 17.1429 t 0 0 0 0 0 0 0 0.9524 17.1429 0 12.381 71.4286 0 0.9524 4.7619 1.9048 0 10.4762 12.381

M04437_2.00_shift8 (EGR1)
; positions_7nt_m3 versus M04437_2.00 (EGR1); m=28/154; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.644985; --------cmCrCCCmCgC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.713 33.137 9.66458 31.2385 1.54779 2.98439 5.56261 59.4771 0.032352 17.4956 7.29218 c 0 0 0 0 0 0 0 0 39.8983 41.6636 73.5642 8.67825 97.2874 93.3119 77.4321 33.5479 98.625 13.0649 74.9754 g 0 0 0 0 0 0 0 0 15.8413 12.5506 6.11728 48.8111 0.191479 1.72942 1.0414 4.23373 0.210288 60.1638 5.01722 t 0 0 0 0 0 0 0 0 19.5474 12.6488 10.654 11.2721 0.973352 1.97429 15.9639 2.7412 1.13232 9.27571 12.7152

M09043_2.00_rc_shift8 (M09043_2.00_rc)
; positions_7nt_m3 versus M09043_2.00_rc; m=29/154; ncol2=12; w=0; offset=0; strand=R; shift=8; score=0.643943; --------cyyTCCCGCCm ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10.7682 5.02773 0.606722 0.199908 1.0347 0.805946 2.3994 2.4233 0.623281 1.47737 27.3399 c 0 0 0 0 0 0 0 0 48.3293 51.9152 35.8988 18.67 96.9688 91.8483 88.9192 0.223295 94.011 71.9488 46.0562 g 0 0 0 0 0 0 0 0 22.2715 17.0811 5.2133 0.31514 0.968297 6.48752 2.89362 85.7663 2.82431 11.8017 6.42487 t 0 0 0 0 0 0 0 0 18.631 25.976 58.2812 80.8149 1.02822 0.858185 5.78776 11.5871 2.54144 14.7722 20.179

M05860_2.00_shift7 (M05860_2.00)
; positions_7nt_m3 versus M05860_2.00; m=30/154; ncol2=13; w=-1; offset=-1; strand=D; shift=7; score=0.640125; -------cymCGCCCmCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 22.4 21 32.6 1 22.2 0.1 0.1 0.1 64.5 0.1 12.8 3.5 c 0 0 0 0 0 0 0 32.3 31.8 51.5 93.5 0.7 99.7 99.8 92.1 35.1 99.8 3.2 71.6 g 0 0 0 0 0 0 0 22.9 19.3 8.6 0.9 69.5 0.1 0.1 0.1 0.2 0.1 71 7.5 t 0 0 0 0 0 0 0 22.4 27.9 7.3 4.6 7.6 0.1 0.1 7.7 0.1 0.1 13.1 17.5

M08996_2.00_shift7 (M08996_2.00)
; positions_7nt_m3 versus M08996_2.00; m=31/154; ncol2=14; w=-1; offset=-1; strand=D; shift=7; score=0.630492; -------cyCCgCCCmCgC ; cor=; Ncor= a 0 0 0 0 0 0 0 10.5691 10.3659 16.8699 0.406504 23.9837 0 0.609756 0 44.9187 1.01626 16.2602 1.42276 c 0 0 0 0 0 0 0 57.7236 54.878 77.8455 98.9837 0 100 98.9837 96.3415 54.4715 98.7805 1.21951 89.6341 g 0 0 0 0 0 0 0 9.7561 8.53659 2.84553 0.609756 61.1789 0 0.406504 0.203252 0.203252 0 67.0732 3.86179 t 0 0 0 0 0 0 0 21.9512 26.2195 2.43902 0 14.8374 0 0 3.45528 0.406504 0.203252 15.4472 5.0813

M08994_2.00_shift6 (M08994_2.00)
; positions_7nt_m3 versus M08994_2.00; m=32/154; ncol2=14; w=-2; offset=-2; strand=D; shift=6; score=0.624465; ------ccyCCrCCCMCrC ; cor=; Ncor= a 0 0 0 0 0 0 10.6 17.6 11 19 3.2 32 0 1 0.8 68.2 1.8 31.2 4.4 c 0 0 0 0 0 0 50 52.8 54.2 73 92.4 1.4 98 98.4 92.6 29.6 95 6.8 72.8 g 0 0 0 0 0 0 17 10.8 9.6 0.8 1.6 41.8 1.8 0.4 0.4 1.4 1.2 39.8 13.4 t 0 0 0 0 0 0 22.4 18.8 25.2 7.2 2.8 24.8 0.2 0.2 6.2 0.8 2 22.2 9.4

M09034_2.00_rc_shift7 (E2F6_rc)
; positions_7nt_m3 versus M09034_2.00_rc (E2F6_rc); m=33/154; ncol2=13; w=-1; offset=-1; strand=R; shift=7; score=0.624425; -------yyyyTCCCGCCy ; cor=; Ncor= a 0 0 0 0 0 0 0 13.6 12.6 7 1.6 1.2 1.2 3.2 4.8 6.6 1 2 14.8 c 0 0 0 0 0 0 0 42.6 37.8 43.8 43.6 1.4 87.2 89.6 89.4 1.2 96.4 70 55.6 g 0 0 0 0 0 0 0 16.2 21.8 10.8 3.6 3.2 4.4 4.8 1.8 70.8 1.6 12.6 3.4 t 0 0 0 0 0 0 0 27.6 27.8 38.4 51.2 94.2 7.2 2.4 4 21.4 1 15.4 26.2

M10133_2.00_shift11 (MZF1)
; positions_7nt_m3 versus M10133_2.00 (MZF1); m=34/154; ncol2=8; w=0; offset=3; strand=D; shift=11; score=0.618785; -----------TCCCCmcy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 45 15 15 c 0 0 0 0 0 0 0 0 0 0 0 5 100 95 90 100 25 55 30 g 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 15 10 15 t 0 0 0 0 0 0 0 0 0 0 0 90 0 0 5 0 15 20 40

M05849_2.00_shift9 (ZNF282)
; positions_7nt_m3 versus M05849_2.00 (ZNF282); m=35/154; ncol2=11; w=0; offset=1; strand=D; shift=9; score=0.616868; ---------cmTCCCaCAC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 18.8119 44.5545 9.901 8.9109 0 0 54.4554 0 69.3069 0 c 0 0 0 0 0 0 0 0 0 45.5446 41.5842 1.9802 90.099 100 99.0099 6.9307 96.0396 24.7525 100 g 0 0 0 0 0 0 0 0 0 10.8911 3.9604 4.9505 0.9901 0 0.9901 24.7525 3.9604 2.9703 0 t 0 0 0 0 0 0 0 0 0 24.7525 9.901 83.1683 0 0 0 13.8614 0 2.9703 0

M04467_2.00_shift6 (ZNF740)
; positions_7nt_m3 versus M04467_2.00 (ZNF740); m=36/154; ncol2=13; w=-2; offset=-2; strand=D; shift=6; score=0.614616; ------cygCCCCCCCCAC ; cor=; Ncor= a 0 0 0 0 0 0 16.3462 8.51666 16.5473 3.08014 1.76844 2.31023 1.0166 1.14401 1.92819 1.04027 2.9304 83.0305 7.7469 c 0 0 0 0 0 0 49.2445 35.7951 15.4853 86.9019 96.9303 95.8086 98.3734 97.7793 96.6755 97.7852 95.9374 12.5147 71.2892 g 0 0 0 0 0 0 14.011 4.99686 55.9397 9.65909 1.2012 0.627063 0.169434 0.336474 0.49867 0.402685 0.566101 1.17233 1.33057 t 0 0 0 0 0 0 20.3984 50.6914 12.0277 0.358852 0.1001 1.25413 0.440529 0.740242 0.897606 0.771812 0.566101 3.28253 19.6334

M04469_2.00_shift6 (ZNF740)
; positions_7nt_m3 versus M04469_2.00 (ZNF740); m=37/154; ncol2=13; w=-2; offset=-2; strand=D; shift=6; score=0.613802; ------cyrCCCCCCCCAc ; cor=; Ncor= a 0 0 0 0 0 0 17.6303 12.5679 29.8318 4.99584 9.32203 1.64684 2.00182 2.10623 0.927644 0.188147 9.74576 70.5214 13.2522 c 0 0 0 0 0 0 47.5829 52.5213 14.0747 87.8435 89.4068 96.5233 95.9964 96.6117 97.8664 99.2474 89.4068 15.9759 67.5416 g 0 0 0 0 0 0 17.2512 5.58573 43.2909 3.08077 1.18644 0.365965 0.636943 0.274725 0.649351 0.28222 0.508475 4.54545 3.45711 t 0 0 0 0 0 0 17.5355 29.3251 12.8026 4.07993 0.0847458 1.46386 1.36488 1.00733 0.556586 0.28222 0.338983 8.95722 15.749

M04470_2.00_shift6 (ZNF740)
; positions_7nt_m3 versus M04470_2.00 (ZNF740); m=38/154; ncol2=13; w=-2; offset=-2; strand=D; shift=6; score=0.613717; ------cygCCCCCCCCaC ; cor=; Ncor= a 0 0 0 0 0 0 15.541 8.9477 24.4419 2.9212 3.81944 0.361011 0.433839 0.433526 0.21692 0 4.37731 67.2363 7.04148 c 0 0 0 0 0 0 48.2934 47.385 14.4533 93.5462 95.625 99.4224 99.5662 99.4942 99.5662 100 84.8952 14.2578 75.1638 g 0 0 0 0 0 0 16.7756 4.34783 52.0999 1.97011 0 0 0 0.0722543 0 0 9.98767 11.2793 1.74672 t 0 0 0 0 0 0 19.39 39.3195 9.00492 1.5625 0.555556 0.216606 0 0 0.21692 0 0.739827 7.22656 16.048

M00765_2.00_shift8 (M00765_2.00)
; positions_7nt_m3 versus M00765_2.00; m=39/154; ncol2=9; w=0; offset=0; strand=D; shift=8; score=0.612524; --------cmCGCCCMc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 17.435 41.7838 0.00455751 0.00455751 0.00455751 0.00455751 0.00455751 30.5774 7.56959 0 0 c 0 0 0 0 0 0 0 0 47.6951 58.2071 99.9863 8.49137 99.9863 91.4995 99.9863 69.4134 59.8878 0 0 g 0 0 0 0 0 0 0 0 17.435 0.00455751 0.00455751 91.4995 0.00455751 8.49137 0.00455751 0.00455751 7.56959 0 0 t 0 0 0 0 0 0 0 0 17.435 0 0 0 0 0 0 0 24.973 0 0

M07940_2.00_rc_shift9 (E2F6_rc)
; positions_7nt_m3 versus M07940_2.00_rc (E2F6_rc); m=40/154; ncol2=11; w=0; offset=1; strand=R; shift=9; score=0.611737; ---------yyTCCCGCcc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 3.8314 0 0 0 0 0 4.2146 0 0 15.7088 c 0 0 0 0 0 0 0 0 0 36.7816 37.1648 0 100 100 90.0383 0 100 62.0689 47.5096 g 0 0 0 0 0 0 0 0 0 18.3908 2.2989 0 0 0 0 83.1417 0 20.6897 12.2605 t 0 0 0 0 0 0 0 0 0 40.9962 60.5363 100 0 0 9.9617 12.6437 0 17.2414 24.5211

M07941_2.00_rc_shift9 (E2F6_rc)
; positions_7nt_m3 versus M07941_2.00_rc (E2F6_rc); m=41/154; ncol2=11; w=0; offset=1; strand=R; shift=9; score=0.609675; ---------yyTCCCGCcc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 8.59379 0 0 0.7812 0 0.3906 7.03121 0 0 19.1406 c 0 0 0 0 0 0 0 0 0 39.8438 35.5469 0 99.2188 100 99.6094 0 100 63.6719 51.5626 g 0 0 0 0 0 0 0 0 0 14.4531 0 0 0 0 0 84.7657 0 22.6562 7.03121 t 0 0 0 0 0 0 0 0 0 37.1094 64.4531 100 0 0 0 8.20311 0 13.6719 22.2656

M03706_2.00_shift6 (M03706_2.00)
; positions_7nt_m3 versus M03706_2.00; m=42/154; ncol2=13; w=-2; offset=-2; strand=D; shift=6; score=0.608851; ------GmCACGCCCmCyy ; cor=; Ncor= a 0 0 0 0 0 0 23.3211 37.4477 0.930714 69.7044 4.95466 22.5231 0.383944 1.1708 0.880339 28.9079 2.44621 18.8759 22.0495 c 0 0 0 0 0 0 4.34676 56.3408 97.5526 8.34975 91.6451 0.479945 98.7784 97.4518 92.2726 65.3429 83.407 37.5044 32.1555 g 0 0 0 0 0 0 69.1087 1.99084 0.620476 21.5025 2.16969 74.4943 0.383944 0.65427 0.945549 0.577234 0.825228 8.16543 11.6254 t 0 0 0 0 0 0 3.22344 4.22059 0.896243 0.44335 1.23057 2.50257 0.453752 0.72314 5.90153 5.17202 13.3215 35.4542 34.1696

M04462_2.00_shift8 (EGR4)
; positions_7nt_m3 versus M04462_2.00 (EGR4); m=43/154; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.604632; --------ymCGCCCMCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 18.605 38.9584 0.633624 9.8065 0 0.0572574 0 72.8326 0 16.0613 1.10299 c 0 0 0 0 0 0 0 0 42.2801 56.974 98.2963 0.322504 99.7999 99.9284 95.7088 25.7694 99.9857 1.82149 89.5344 g 0 0 0 0 0 0 0 0 10.169 1.09935 0 83.3851 0.0428878 0 0.205648 1.14763 0.0143225 74.7991 2.70617 t 0 0 0 0 0 0 0 0 28.9459 2.96826 1.07012 6.48591 0.157255 0.0143143 4.08555 0.250391 0 7.31812 6.65641

M07939_2.00_rc_shift9 (E2F6_rc)
; positions_7nt_m3 versus M07939_2.00_rc (E2F6_rc); m=44/154; ncol2=11; w=0; offset=1; strand=R; shift=9; score=0.603124; ---------yyTCCCGCcy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 9.7902 0 0 0 0 1.3986 3.4965 0 0 15.3846 c 0 0 0 0 0 0 0 0 0 34.2657 33.2168 0 97.9021 100 98.6014 0 100 65.035 47.9021 g 0 0 0 0 0 0 0 0 0 20.6294 0 0 2.0979 0 0 82.5175 0 18.8811 8.3916 t 0 0 0 0 0 0 0 0 0 35.3147 66.7832 100 0 0 0 13.986 0 16.0839 28.3217

M06073_2.00_shift7 (M06073_2.00)
; positions_7nt_m3 versus M06073_2.00; m=45/154; ncol2=14; w=-1; offset=-1; strand=D; shift=7; score=0.601674; -------mcmCrCCCmCrc ; cor=; Ncor= a 0 0 0 0 0 0 0 27.4252 23.9949 36.4842 8.51155 32.763 1.62532 0 1.66809 67.408 0.342173 30.8811 15.6544 c 0 0 0 0 0 0 0 32.4569 37.3824 47.6476 81.9076 3.89222 98.3747 100 83.2763 29.8118 99.6578 13.6869 59.0248 g 0 0 0 0 0 0 0 20.8976 15.0128 6.97177 3.84944 51.0693 0 0 0 0.25663 0 46.1078 9.83747 t 0 0 0 0 0 0 0 19.2203 23.6099 8.89649 5.73139 12.2754 0 0 15.0556 2.52352 0 9.32421 15.4833

M06072_2.00_shift7 (M06072_2.00)
; positions_7nt_m3 versus M06072_2.00; m=46/154; ncol2=14; w=-1; offset=-1; strand=D; shift=7; score=0.598395; -------hmmCGCCCmCvy ; cor=; Ncor= a 0 0 0 0 0 0 0 27.7778 26.3158 47.3684 10.5263 15.7895 0 0 0 57.8947 0 31.5789 10.5263 c 0 0 0 0 0 0 0 44.4444 47.3684 47.3684 84.2105 0 100 94.7368 100 36.8421 100 26.3158 52.6316 g 0 0 0 0 0 0 0 0 21.0526 5.26316 0 73.6842 0 5.26316 0 0 0 42.1053 5.26316 t 0 0 0 0 0 0 0 27.7778 5.26316 0 5.26316 10.5263 0 0 0 5.26316 0 0 31.5789

M07563_2.00_shift10 (ZNF263)
; positions_7nt_m3 versus M07563_2.00 (ZNF263); m=47/154; ncol2=9; w=0; offset=2; strand=D; shift=10; score=0.598218; ----------STCCTCCCy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0652742 0.0652742 0.0652742 0.848564 0.0652742 0.0652742 0.0652742 5.5483 6.33159 c 0 0 0 0 0 0 0 0 0 0 70.8225 0.0652742 82.5718 96.1488 0.0652742 99.8042 99.8042 75.5222 46.2794 g 0 0 0 0 0 0 0 0 0 0 26.6971 0.0652742 17.2977 0.0652742 0.0652742 0.0652742 0.0652742 0.0652742 19.9086 t 0 0 0 0 0 0 0 0 0 0 2.41514 99.8042 0.0652742 2.93734 99.8042 0.0652742 0.0652742 18.8642 27.4804

M00233_2.00_shift10 (EGR2)
; positions_7nt_m3 versus M00233_2.00 (EGR2); m=48/154; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.597365; ----------crCCCmCgy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 17.7414 25.6279 11.1401 0.99736 5.34589 49.217 2.94523 21.4637 12.4753 c 0 0 0 0 0 0 0 0 0 0 50.1942 8.11473 80.6845 95.3311 71.9757 40.2955 90.034 11.205 47.1698 g 0 0 0 0 0 0 0 0 0 0 11.6569 43.9776 2.18267 2.99623 2.26218 5.4534 1.9159 49.2231 14.2073 t 0 0 0 0 0 0 0 0 0 0 20.4075 22.2798 5.99273 0.675269 20.4162 5.03412 5.10483 18.1082 26.1475

M10137_2.00_shift7 (PATZ1)
; positions_7nt_m3 versus M10137_2.00 (PATZ1); m=49/154; ncol2=13; w=-1; offset=-1; strand=D; shift=7; score=0.596812; -------kgkCCCCCCCCs ; cor=; Ncor= a 0 0 0 0 0 0 0 12.8205 15.3846 17.9487 0 0 0 0 10.2564 0 5.12821 2.5641 0 c 0 0 0 0 0 0 0 15.3846 10.2564 0 100 100 97.4359 100 74.359 92.5 89.7436 71.7949 55.2632 g 0 0 0 0 0 0 0 28.2051 51.2821 51.2821 0 0 0 0 0 0 0 10.2564 31.5789 t 0 0 0 0 0 0 0 43.5897 23.0769 30.7692 0 0 2.5641 0 15.3846 7.5 5.12821 15.3846 13.1579

M04513_2.00_shift6 (KLF15)
; positions_7nt_m3 versus M04513_2.00 (KLF15); m=50/154; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.589626; ------rcCmCrCCCmcc- ; cor=; Ncor= a 0 0 0 0 0 0 28.524 19.4706 14.8438 61.7341 3.34436 26.8483 3.79323 5.3418 6.84564 33.1376 11.742 21.0788 0 c 0 0 0 0 0 0 15.5473 63.1813 75.3437 31.1753 88.6071 11.12 89.6616 90.0635 80.906 55.3028 67.6831 45.1452 0 g 0 0 0 0 0 0 49.5025 6.36792 2.3125 3.19846 1.94781 48.307 1.3016 2.24131 4.83221 2.89908 3.75044 9.50207 0 t 0 0 0 0 0 0 6.4262 10.9801 7.5 3.8921 6.1007 13.7247 5.24358 2.35338 7.41611 8.66055 16.8244 24.2739 0

M08398_2.00_shift5 (KLF14)
; positions_7nt_m3 versus M08398_2.00 (KLF14); m=51/154; ncol2=14; w=-3; offset=-3; strand=D; shift=5; score=0.587357; -----ggcCmCGCCCmCyy ; cor=; Ncor= a 0 0 0 0 0 22.5873 11.9097 9.2402 4.3121 37.7823 0 13.963 0 0 0 41.6838 2.6694 13.347 13.7577 c 0 0 0 0 0 13.7577 14.5791 60.9856 79.4661 61.3963 99.5893 0 100 100 92.4025 49.076 74.1273 45.9959 34.7023 g 0 0 0 0 0 57.2895 67.3511 7.3922 4.3121 0.8214 0 77.2074 0 0 0 0.8214 4.7228 8.0082 20.1232 t 0 0 0 0 0 6.3655 6.1602 22.3819 11.9097 0 0.4107 8.8296 0 0 7.5975 8.4189 18.4805 32.6489 31.4168

M04511_2.00_shift6 (KLF15)
; positions_7nt_m3 versus M04511_2.00 (KLF15); m=52/154; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.585714; ------vccmCgCCCmcc- ; cor=; Ncor= a 0 0 0 0 0 0 29.0396 21.2916 15.9457 54.3609 0 19.6352 0.665188 3.79702 1.63279 36.4374 11.0315 17.5305 0 c 0 0 0 0 0 0 25.3811 52.9566 65.996 34.7006 96.8981 23.1277 96.9697 93.1157 87.4375 48.7021 64.9423 48.3232 0 g 0 0 0 0 0 0 34.4893 12.1695 5.5332 3.43899 0 50.9119 0.406504 2.37757 2.53249 4.34783 7.1985 12.5381 0 t 0 0 0 0 0 0 11.0899 13.5822 12.5252 7.49948 3.10192 6.32518 1.95861 0.709723 8.3972 10.5127 16.8277 21.6082 0

M00784_2.00_shift10 (M00784_2.00)
; positions_7nt_m3 versus M00784_2.00; m=53/154; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.583711; ----------cCCCCCCay ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 17.3335 21.1796 0.0178463 0.803491 0.0177459 2.56885 12.8322 46.6398 19.5656 c 0 0 0 0 0 0 0 0 0 0 64.2411 73.1883 99.8869 96.661 98.3368 95.9145 75.336 24.84 35.2961 g 0 0 0 0 0 0 0 0 0 0 11.1634 0.0305936 0.0610562 0.072891 0.110626 0.0783521 1.32572 14.3314 12.2285 t 0 0 0 0 0 0 0 0 0 0 7.26191 5.60151 0.0341852 2.46258 1.5348 1.43829 10.5061 14.1888 32.9098

M01862_2.00_shift8 (M01862_2.00)
; positions_7nt_m3 versus M01862_2.00; m=54/154; ncol2=9; w=0; offset=0; strand=D; shift=8; score=0.582266; --------hmCGCCCmy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.7384 42.0657 0.00439598 0.00439598 0.00439598 0.00439598 0.00439598 40.0281 6.56255 0 0 c 0 0 0 0 0 0 0 0 26.8904 57.9255 99.9868 0.00439598 99.9868 99.9868 99.9868 59.9631 55.5822 0 0 g 0 0 0 0 0 0 0 0 18.4418 0.00439598 0.00439598 99.9868 0.00439598 0.00439598 0.00439598 0.00439598 6.56255 0 0 t 0 0 0 0 0 0 0 0 27.9294 0 0 0 0 0 0 0 31.2927 0 0

M00223_2.00_shift8 (KLF1)
; positions_7nt_m3 versus M00223_2.00 (KLF1); m=55/154; ncol2=9; w=0; offset=0; strand=D; shift=8; score=0.582108; --------wwybmCCCC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.7492 26.1893 24.8111 20.2632 32.7309 7.58489 13.0131 16.1177 2.67489 0 0 c 0 0 0 0 0 0 0 0 24.0083 24.9121 25.3123 28.4688 30.2144 70.5385 84.4328 79.037 78.5636 0 0 g 0 0 0 0 0 0 0 0 24.4933 23.2279 24.5642 25.2495 23.0651 0.417345 1.38535 4.22034 1.05539 0 0 t 0 0 0 0 0 0 0 0 25.7492 25.6707 25.3123 26.0185 13.9897 21.4593 1.16877 0.62495 17.7061 0 0

M08321_2.00_shift5 (ZNF281)
; positions_7nt_m3 versus M08321_2.00 (ZNF281); m=56/154; ncol2=12; w=-3; offset=-3; strand=D; shift=5; score=0.582074; -----ybCCCCTCCCCC-- ; cor=; Ncor= a 0 0 0 0 0 9.89583 12.5744 0.967262 1.86012 0.0744048 10.4911 9.59821 0.0744048 0.0744048 0.0744048 0.0744048 0.0744048 0 0 c 0 0 0 0 0 39.3601 27.753 92.3363 96.2054 99.7768 77.1577 0.0744048 99.7768 99.7768 96.2054 99.7768 99.7768 0 0 g 0 0 0 0 0 24.4792 27.1577 2.75298 0.0744048 0.0744048 0.0744048 17.0387 0.0744048 0.0744048 0.0744048 0.0744048 0.0744048 0 0 t 0 0 0 0 0 26.2649 32.5149 3.94345 1.86012 0.0744048 12.2768 73.2887 0.0744048 0.0744048 3.64583 0.0744048 0.0744048 0 0

M00143_2.00_shift10 (M00143_2.00)
; positions_7nt_m3 versus M00143_2.00; m=57/154; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.579969; ----------ccCCCCCay ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 23.4762 22.5596 3.46737 4.55575 4.44789 11.7815 6.04568 40.4091 24.0527 c 0 0 0 0 0 0 0 0 0 0 48.715 67.0984 90.3233 89.6927 84.1356 86.1883 87.2994 15.0151 29.9716 g 0 0 0 0 0 0 0 0 0 0 10.7616 2.68092 2.81059 0.0747497 2.18678 0.285514 0.548452 20.0665 17.4659 t 0 0 0 0 0 0 0 0 0 0 17.0472 7.66113 3.39871 5.67681 9.22973 1.74462 6.10644 24.5093 28.5098

M00241_2.00_shift9 (KLF11)
; positions_7nt_m3 versus M00241_2.00 (KLF11); m=58/154; ncol2=8; w=0; offset=1; strand=D; shift=9; score=0.579858; ---------mCGCCCCC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 38.4202 0.0499002 10.0299 5.03992 5.03992 0.0499002 25 0.0664894 0 0 c 0 0 0 0 0 0 0 0 0 61.4264 99.8503 10.0299 94.8603 89.8703 99.8503 74.9002 93.1516 0 0 g 0 0 0 0 0 0 0 0 0 0.0766871 0.0499002 79.8902 0.0499002 5.03992 0.0499002 0.0499002 0.0664894 0 0 t 0 0 0 0 0 0 0 0 0 0.0766871 0.0499002 0.0499002 0.0499002 0.0499002 0.0499002 0.0499002 6.71543 0 0

M00242_2.00_shift9 (KLF11)
; positions_7nt_m3 versus M00242_2.00 (KLF11); m=59/154; ncol2=8; w=0; offset=1; strand=D; shift=9; score=0.579509; ---------mCGCCCCC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 35.6838 0.052521 5.30462 5.30462 0.052521 0.052521 21.0609 0.0766871 0 0 c 0 0 0 0 0 0 0 0 0 64.1738 99.8424 10.5567 94.5903 94.5903 99.8424 78.834 92.1012 0 0 g 0 0 0 0 0 0 0 0 0 0.0712251 0.052521 84.0861 0.052521 5.30462 0.052521 0.052521 0.0766871 0 0 t 0 0 0 0 0 0 0 0 0 0.0712251 0.052521 0.052521 0.052521 0.052521 0.052521 0.052521 7.7454 0 0

M00341_2.00_shift10 (PAX6)
; positions_7nt_m3 versus M00341_2.00 (PAX6); m=60/154; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.578714; ----------sTsCCCGGs ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 4.94776 0.0443374 3.84757 1.27985 1.4569 0.642756 5.92253 3.31751 6.94236 c 0 0 0 0 0 0 0 0 0 0 46.0135 0.0456877 63.9078 93.3865 95.2316 99.2865 23.3072 5.80787 38.384 g 0 0 0 0 0 0 0 0 0 0 33.4127 0.0195276 29.8875 0.776271 3.02319 0.000919215 70.7225 90.8504 49.7814 t 0 0 0 0 0 0 0 0 0 0 15.626 99.8904 2.35712 4.55737 0.288319 0.0698091 0.0477758 0.0242149 4.8922

M09506_2.00_shift10 (EGR1)
; positions_7nt_m3 versus M09506_2.00 (EGR1); m=61/154; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.576189; ----------CrCCCMCrC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 2.4 42.2 0.1 2.4 0.1 71.6 0.1 30 0.4 c 0 0 0 0 0 0 0 0 0 0 94 1 99.7 97.3 97.1 28.2 99.7 2.3 88.2 g 0 0 0 0 0 0 0 0 0 0 0.2 41.5 0.1 0.2 0.1 0.1 0.1 52.3 3.6 t 0 0 0 0 0 0 0 0 0 0 3.4 15.3 0.1 0.1 2.7 0.1 0.1 15.4 7.8

M00622_2.00_shift10 (M00622_2.00)
; positions_7nt_m3 versus M00622_2.00; m=62/154; ncol2=8; w=0; offset=2; strand=D; shift=10; score=0.57248; ----------CgCCCmCg- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 4.20133 13.3489 0.0302663 0.0302663 0.0302663 57.5363 0.0302663 16.6805 0 c 0 0 0 0 0 0 0 0 0 0 91.5557 23.3356 99.9092 99.9092 96.8826 33.3232 99.9092 8.36106 0 g 0 0 0 0 0 0 0 0 0 0 0.0415973 56.6245 0.0302663 0.0302663 0.0302663 9.11017 0.0302663 66.5973 0 t 0 0 0 0 0 0 0 0 0 0 4.20133 6.69108 0.0302663 0.0302663 3.0569 0.0302663 0.0302663 8.36106 0

M04514_2.00_shift6 (KLF15)
; positions_7nt_m3 versus M04514_2.00 (KLF15); m=63/154; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.565042; ------GCCMCGCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 0 22.0614 15.9576 2.97039 68.0475 0 8.01932 0 0 0 34.3078 3.20988 21.9548 0 c 0 0 0 0 0 0 0 81.541 87.8529 31.9525 100 0 100 100 93.6858 61.6939 75.7059 34.0573 0 g 0 0 0 0 0 0 75.7569 0 2.87204 0 0 86.2995 0 0 0 0 0.901771 12.7407 0 t 0 0 0 0 0 0 2.18166 2.50137 6.30471 0 0 5.68116 0 0 6.31424 3.99828 20.1825 31.2472 0

M08317_2.00_shift6 (KLF10)
; positions_7nt_m3 versus M08317_2.00 (KLF10); m=64/154; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score=0.563205; ------gcCmCRCCCCCys ; cor=; Ncor= a 0 0 0 0 0 0 5.6645 19.1721 3.9216 45.098 0 29.1939 0 0.2179 0.2179 19.1721 4.5752 16.5577 11.5468 c 0 0 0 0 0 0 17.8649 64.2702 87.3638 47.4946 94.5534 0 100 99.7821 89.3246 69.0632 69.281 28.976 38.9978 g 0 0 0 0 0 0 66.2309 6.5359 1.3072 7.4074 4.5752 68.8453 0 0 0 0.6536 4.793 23.3115 27.6688 t 0 0 0 0 0 0 10.2397 10.0218 7.4074 0 0.8715 1.9608 0 0 10.4575 11.1111 21.3508 31.1547 21.7865

M04512_2.00_shift6 (KLF15)
; positions_7nt_m3 versus M04512_2.00 (KLF15); m=65/154; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.561309; ------rCCmCGCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 0 26.7918 15.1634 5.5098 65.5063 0.240964 13.6948 0.359368 0.120627 0.406939 26.0445 5.30621 13.4058 0 c 0 0 0 0 0 0 10.7319 70.854 81.1765 31.3766 99.759 1.54364 99.1854 99.8794 88.67 61.7603 71.1917 50.8454 0 g 0 0 0 0 0 0 51.6875 5.57933 9.43137 2.19937 0 81.9315 0.167705 0 0.321268 0.487805 3.16162 10.5556 0 t 0 0 0 0 0 0 10.7888 8.40322 3.88235 0.917722 0 2.83 0.287494 0 10.6018 11.7073 20.3405 25.1932 0

M08096_2.00_shift6 (SP1)
; positions_7nt_m3 versus M08096_2.00 (SP1); m=66/154; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.559419; ------gCCCCkCCCCy-- ; cor=; Ncor= a 0 0 0 0 0 0 9.81223 0 1.1335 0 0 15.5599 0 0 0 12.0678 7.46508 0 0 c 0 0 0 0 0 0 20.4488 71.1587 76.746 100 99.1642 0 100 100 76.4713 72.7845 56.8926 0 0 g 0 0 0 0 0 0 48.9008 7.35058 0 0 0 52.9425 0 0 0 0 8.40394 0 0 t 0 0 0 0 0 0 20.8381 21.4907 22.1204 0 0.835814 31.4976 0 0 23.5287 15.1477 27.2384 0 0

M07928_2.00_shift7 (EGR1)
; positions_7nt_m3 versus M07928_2.00 (EGR1); m=67/154; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.556906; -------yyCCGCCCmCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 10.2828 13.8817 14.91 0.7712 7.455 0 0 0 37.018 0 3.856 0.2571 c 0 0 0 0 0 0 0 46.7866 40.1028 76.3496 98.7147 0 100 100 94.0874 61.9537 100 0 93.3162 g 0 0 0 0 0 0 0 17.7378 19.7943 2.5707 0 88.1748 0 0 0 1.0283 0 88.689 1.7995 t 0 0 0 0 0 0 0 25.1928 26.2211 6.1697 0.5141 4.3702 0 0 5.9126 0 0 7.45501 4.6272

M00778_2.00_shift10 (M00778_2.00)
; positions_7nt_m3 versus M00778_2.00; m=68/154; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.549158; ----------cgCCCMCGc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 10.1428 18.7938 2.98506 0.0789937 0.779978 73.0394 0.052912 12.7618 6.82934 c 0 0 0 0 0 0 0 0 0 0 65.8094 3.20121 95.93 99.6449 91.9744 25.3049 99.5715 4.33385 62.2543 g 0 0 0 0 0 0 0 0 0 0 5.56648 63.6582 0.255028 0.23731 0.206286 0.836105 0.0424629 74.1771 8.0143 t 0 0 0 0 0 0 0 0 0 0 18.4814 14.3468 0.829957 0.0388368 7.03931 0.819549 0.333163 8.72729 22.9021

M02888_2.00_shift6 (KLF16)
; positions_7nt_m3 versus M02888_2.00 (KLF16); m=69/154; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.549007; ------gmCMCgCCCMC-- ; cor=; Ncor= a 0 0 0 0 0 0 21.8146 33.2964 3.5942 69.9939 3.85064 18.5102 0.493827 0.123305 0.925926 26.152 1.57094 0 0 c 0 0 0 0 0 0 17.5237 59.5713 93.4493 28.0584 94.049 6.4432 99.5062 99.3835 93.287 70.3172 79.136 0 0 g 0 0 0 0 0 0 52.8005 2.84553 0.347826 1.94766 0.991832 60.0372 0 0.493218 0.173611 1.13704 1.12911 0 0 t 0 0 0 0 0 0 7.86112 4.28677 2.6087 0 1.10852 15.0093 0 0 5.61343 2.39378 18.164 0 0

M02921_2.00_shift6 (SP1)
; positions_7nt_m3 versus M02921_2.00 (SP1); m=70/154; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.543928; ------rCCmCrCCCmc-- ; cor=; Ncor= a 0 0 0 0 0 0 46.3014 19.2941 6.62971 47.0964 0.606612 30.0733 0 0.183038 0.127065 38.9714 17.6778 0 0 c 0 0 0 0 0 0 2.23634 70.7016 75.4216 47.7062 99.0294 0.867355 99.6642 99.6034 82.9733 47.5875 51.7187 0 0 g 0 0 0 0 0 0 43.205 3.37809 1.8711 4.96516 0.181984 48.8261 0.030525 0.0610128 0 1.56416 10.4546 0 0 t 0 0 0 0 0 0 8.25724 6.62625 16.0776 0.232288 0.181984 20.2333 0.30525 0.152532 16.8996 11.877 20.1489 0 0

M02898_2.00_shift6 (SP6,SP8)
; positions_7nt_m3 versus M02898_2.00 (SP6,SP8); m=71/154; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.542566; ------rmCACgCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 0 31.1377 31.5789 12.1951 78.6982 3.88889 9.32836 2.77778 1.16279 0 51.1364 5.41667 18.6747 0 c 0 0 0 0 0 0 16.1677 66.0819 81.4634 19.5266 92.7778 13.806 92.7778 97.093 89.7849 43.75 69.5833 31.3253 0 g 0 0 0 0 0 0 46.7066 0 0 0.591716 0.555556 62.3134 3.33333 1.74419 2.15054 3.40909 8.75 0.60241 0 t 0 0 0 0 0 0 5.98802 2.33918 6.34146 1.18343 2.77778 14.5522 1.11111 0 8.06452 1.70455 16.25 49.3976 0

M10300_2.00_shift5 (SP1)
; positions_7nt_m3 versus M10300_2.00 (SP1); m=72/154; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.542034; -----vrcCCCGCCCccy- ; cor=; Ncor= a 0 0 0 0 0 25 26.8519 8.33333 5.55556 7.40741 1.85185 8.33333 0 0 0.925926 17.5926 7.40741 18.5185 0 c 0 0 0 0 0 29.6296 19.4444 66.6667 70.3704 91.6667 91.6667 0 98.1481 100 82.4074 60.1852 51.8519 32.4074 0 g 0 0 0 0 0 37.037 50.9259 9.25926 4.62963 0.925926 4.62963 74.0741 1.85185 0 0.925926 9.25926 18.5185 19.4444 0 t 0 0 0 0 0 8.33333 2.77778 15.7407 19.4444 0 1.85185 17.5926 0 0 15.7407 12.963 22.2222 29.6296 0

M00135_2.00_shift10 (M00135_2.00)
; positions_7nt_m3 versus M00135_2.00; m=73/154; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.540693; ----------mgmCCCCcw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 34.2572 8.19755 37.9693 0.923364 0.131831 14.6301 2.6438 18.9683 31.1332 c 0 0 0 0 0 0 0 0 0 0 26.9477 5.33258 58.3686 98.5209 99.8597 83.3526 79.2191 45.2756 21.9392 g 0 0 0 0 0 0 0 0 0 0 20.3666 63.0441 0.004593 0.00680749 0.00406137 0.0174761 2.14302 12.5883 20.6616 t 0 0 0 0 0 0 0 0 0 0 18.4285 23.4257 3.65749 0.548959 0 1.99986 15.9941 23.1679 26.266

M04645_2.00_shift6 (SP6,SP9)
; positions_7nt_m3 versus M04645_2.00 (SP6,SP9); m=74/154; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.540291; ------rcCmCGCCCmcy- ; cor=; Ncor= a 0 0 0 0 0 0 34.0131 14.7242 10.1294 65.7105 0.0806777 6.95222 0.8846 0 1.33288 41.9423 6.64311 17.1359 0 c 0 0 0 0 0 0 17.9445 63.7617 77.343 30.2145 98.8705 6.58979 98.5525 98.7908 83.7662 44.2998 65.8304 47.6132 0 g 0 0 0 0 0 0 38.8254 8.0385 3.56579 1.50134 0.68576 80.7578 0 0 0.820232 1.33709 6.74912 8.32313 0 t 0 0 0 0 0 0 9.21697 13.4755 8.96182 2.57373 0.36305 5.70016 0.562927 1.20919 14.0807 12.4208 20.7774 26.9278 0

M04530_2.00_shift2 (ZNF444)
; positions_7nt_m3 versus M04530_2.00 (ZNF444); m=75/154; ncol2=16; w=-6; offset=-6; strand=D; shift=2; score=0.539847; --ccrtCCCCCTCCCCCm- ; cor=; Ncor= a 0 0 14.2547 10.0366 35.0522 21.7179 0.373886 0.461095 0.373778 0 0.78853 0.358372 0.387041 0.13002 0.628661 0.311791 0.45977 29.0635 0 c 0 0 44.11 65.1368 5.80812 13.4159 99.0653 99.3228 99.1518 99.812 98.7814 0.874427 98.9392 99.7544 98.6998 95.7058 98.9943 42.1769 0 g 0 0 21.5485 11.3731 56.9684 0.675169 0.345125 0.0432277 0 0 0.157706 0.0286697 0.0716743 0.0866802 0.171453 0 0.445402 9.19091 0 t 0 0 20.0868 13.4535 2.17126 64.191 0.215703 0.172911 0.474411 0.18797 0.272401 98.7385 0.602064 0.0288934 0.500071 3.98243 0.100575 19.5687 0

M04529_2.00_shift2 (ZNF444)
; positions_7nt_m3 versus M04529_2.00 (ZNF444); m=76/154; ncol2=16; w=-6; offset=-6; strand=D; shift=2; score=0.539152; --ccGTCCCCCTCCCCCm- ; cor=; Ncor= a 0 0 18.4334 8.68599 21.0837 15.4828 0.210084 0.26866 0.175152 0.0233454 0.687886 0.418118 0.0700853 0.21028 0.0935126 0.287158 0.174948 26.0202 0 c 0 0 36.7144 67.4881 6.29233 11.9161 99.288 99.5211 99.5213 99.4631 99.1139 0.778165 99.5795 99.5794 99.6143 94.8771 99.4868 44.137 0 g 0 0 24.6717 10.7262 70.035 1.145 0.233427 0.093447 0 0.163418 0.0466364 0.139373 0 0.0350467 0.0935126 0.160809 0.0349895 7.24672 0 t 0 0 20.1806 13.0997 2.58903 71.4561 0.268441 0.116809 0.303596 0.350181 0.151568 98.6643 0.350426 0.175234 0.198714 4.67494 0.303242 22.5962 0

M04658_2.00_shift5 (KLF14)
; positions_7nt_m3 versus M04658_2.00 (KLF14); m=77/154; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.536377; -----crcCaCrCCCmcc- ; cor=; Ncor= a 0 0 0 0 0 18.6657 35.0563 17.8602 3.48319 54.8431 1.55897 35.8318 0 0.333264 0.287186 35.8439 11.1429 20.7362 0 c 0 0 0 0 0 38.9313 10.1459 62.6548 88.8259 20.6916 98.0821 0 99.6665 99.5938 80.7754 50.5193 62.5422 41.0331 0 g 0 0 0 0 0 19.7218 44.6686 8.18319 1.66264 16.1782 0 52.0917 0 0.0729015 0.0675733 2.51964 5.99601 13.7927 0 t 0 0 0 0 0 22.6812 10.1292 11.3018 6.02824 8.28698 0.358974 12.0765 0.333507 0 18.8698 11.1171 20.3189 24.4379 0

M00339_2.00_rc_shift9 (PAX6_rc)
; positions_7nt_m3 versus M00339_2.00_rc (PAX6_rc); m=78/154; ncol2=13; w=0; offset=1; strand=R; shift=9; score= 0.5339; ---------gmwCCgcCgt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 19.9528 26.8352 28.1956 4.7031 2.37697 9.4686 20.7834 10.0677 14.4899 18.0787 c 0 0 0 0 0 0 0 0 0 19.9528 37.8474 7.2146 85.8907 83.6291 21.0027 60.5757 69.8687 15.3081 16.603 g 0 0 0 0 0 0 0 0 0 40.1415 17.6587 16.391 4.7031 11.617 49.6149 9.44277 10.7374 65.1331 17.409 t 0 0 0 0 0 0 0 0 0 19.9528 17.6587 48.1988 4.7031 2.37697 19.9138 9.19812 9.3262 5.06887 47.9093

M08092_2.00_shift6 (SP2)
; positions_7nt_m3 versus M08092_2.00 (SP2); m=79/154; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score=0.533703; ------gyCCCGCCyCyyc ; cor=; Ncor= a 0 0 0 0 0 0 9.48992 2.31317 3.08422 0 0 10.3203 0 0 0 12.2183 6.82088 11.0913 13.4045 c 0 0 0 0 0 0 15.0059 48.102 82.2064 99.5848 97.4496 0 100 98.2206 65.7177 70.9371 57.5919 32.8588 42.5267 g 0 0 0 0 0 0 60.9727 15.2432 0.059312 0.415184 0 75.9193 0 0 0 0 5.87189 19.2764 23.7841 t 0 0 0 0 0 0 14.5314 34.3416 14.6501 0 2.55042 13.7604 0 1.77936 34.2823 16.8446 29.7153 36.7734 20.2847

M00375_2.00_shift11 (M00375_2.00)
; positions_7nt_m3 versus M00375_2.00; m=80/154; ncol2=9; w=0; offset=3; strand=D; shift=11; score=0.532023; -----------gCCcmCgc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 24.3908 13.6334 2.50247 7.7362 48.4453 2.10408 20.8312 15.2373 c 0 0 0 0 0 0 0 0 0 0 0 12.7331 74.6286 84.5445 67.0817 40.4649 91.2753 12.1393 46.7 g 0 0 0 0 0 0 0 0 0 0 0 41.026 2.7802 9.1823 3.72814 5.15741 0.424807 48.7377 13.9258 t 0 0 0 0 0 0 0 0 0 0 0 21.8501 8.95779 3.77076 21.454 5.93243 6.19585 18.2918 24.1369

M08880_2.00_shift5 (KLF9)
; positions_7nt_m3 versus M08880_2.00 (KLF9); m=81/154; ncol2=15; w=-3; offset=-3; strand=D; shift=5; score=0.531143; -----gGcCMCGCCCmCyy ; cor=; Ncor= a 0 0 0 0 0 14.4531 10.9375 16.0156 1.5625 71.875 0 23.0469 0 1.5625 0 32.0312 2.73438 9.76562 9.375 c 0 0 0 0 0 20.3125 3.125 67.1875 97.6562 26.1719 100 0.390625 99.2188 98.0469 98.4375 63.2812 80.0781 26.5625 46.0938 g 0 0 0 0 0 52.3438 84.375 11.7188 0.390625 1.5625 0 75.7812 0.78125 0.390625 0 0.390625 1.17188 13.6719 18.75 t 0 0 0 0 0 12.8906 1.5625 5.07812 0.390625 0.390625 0 0.78125 0 0 1.5625 4.29688 16.0156 50 25.7812

M08900_2.00_shift7 (ZIC1)
; positions_7nt_m3 versus M08900_2.00 (ZIC1); m=82/154; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.531099; -------smCCwCCCm--- ; cor=; Ncor= a 0 0 0 0 0 0 0 6.59609 61.2378 0 11.7264 49.5114 0 2.9316 0 30.1303 0 0 0 c 0 0 0 0 0 0 0 27.443 26.7101 70.684 76.5472 17.5896 94.1368 94.1368 85.342 51.9544 0 0 0 g 0 0 0 0 0 0 0 44.3811 8.79479 23.4528 0 2.9316 5.86319 2.9316 5.86319 13.1922 0 0 0 t 0 0 0 0 0 0 0 21.5798 3.25733 5.86319 11.7264 29.9674 0 0 8.79479 4.72313 0 0 0

M08990_2.00_shift7 (M08990_2.00)
; positions_7nt_m3 versus M08990_2.00; m=83/154; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.531099; -------smCCwCCCm--- ; cor=; Ncor= a 0 0 0 0 0 0 0 6.59609 61.2378 0 11.7264 49.5114 0 2.9316 0 30.1303 0 0 0 c 0 0 0 0 0 0 0 27.443 26.7101 70.684 76.5472 17.5896 94.1368 94.1368 85.342 51.9544 0 0 0 g 0 0 0 0 0 0 0 44.3811 8.79479 23.4528 0 2.9316 5.86319 2.9316 5.86319 13.1922 0 0 0 t 0 0 0 0 0 0 0 21.5798 3.25733 5.86319 11.7264 29.9674 0 0 8.79479 4.72313 0 0 0

M09505_2.00_shift9 (MAZ)
; positions_7nt_m3 versus M09505_2.00 (MAZ); m=84/154; ncol2=8; w=0; offset=1; strand=D; shift=9; score=0.530984; ---------CCCCcCCC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0.1 0.1 0.1 0.1 5.4 8.4 0.1 0.1 0 0 c 0 0 0 0 0 0 0 0 0 99.7 95.6 89.4 84.8 60.7 70.2 99.7 98.9 0 0 g 0 0 0 0 0 0 0 0 0 0.1 0.1 5.8 6.1 14.9 8.2 0.1 0.1 0 0 t 0 0 0 0 0 0 0 0 0 0.1 4.2 4.7 9 19 13.2 0.1 0.9 0 0

M07755_2.00_shift5 (ZNF616)
; positions_7nt_m3 versus M07755_2.00 (ZNF616); m=85/154; ncol2=15; w=-3; offset=-3; strand=D; shift=5; score=0.529921; -----yCrygCTCACCywy ; cor=; Ncor= a 0 0 0 0 0 8.97059 7.79412 47.2059 2.5 21.3235 0.147059 0.735294 0.147059 80.1471 0.147059 0.147059 3.67647 33.6765 4.85294 c 0 0 0 0 0 26.6176 73.0882 3.08824 59.5588 12.5 96.0294 0.147059 83.0882 0.147059 93.6765 85.4412 48.9706 18.9706 46.6176 g 0 0 0 0 0 8.38235 6.02941 44.8529 4.85294 62.5 0.147059 0.147059 0.147059 4.85294 1.91176 0.147059 5.44118 18.9706 13.6765 t 0 0 0 0 0 56.0294 13.0882 4.85294 33.0882 3.67647 3.67647 98.9706 16.6176 14.8529 4.26471 14.2647 41.9118 28.3824 34.8529

M07626_2.00_shift10 (ZNF282)
; positions_7nt_m3 versus M07626_2.00 (ZNF282); m=86/154; ncol2=6; w=0; offset=2; strand=D; shift=10; score=0.529418; ----------CTCCCs--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 0 0 0 c 0 0 0 0 0 0 0 0 0 0 99.7614 0.0795234 99.7614 99.7614 99.7614 56.9037 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 42.9372 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0.0795234 99.7614 0.0795234 0.0795234 0.0795234 0.0795234 0 0 0

M08323_2.00_shift4 (KLF15)
; positions_7nt_m3 versus M08323_2.00 (KLF15); m=87/154; ncol2=15; w=-4; offset=-4; strand=D; shift=4; score=0.52799; ----ccCcggCyCCgCCYC ; cor=; Ncor= a 0 0 0 0 5.4217 3.8153 6.4257 13.6546 16.2651 9.6386 2.6104 9.4378 8.2329 0 18.8755 0 0 0 10.6426 c 0 0 0 0 65.261 64.0562 70.8835 62.4498 23.0924 24.8996 85.3414 47.5904 88.755 100 0 99.1968 100 70.8835 69.0763 g 0 0 0 0 16.4659 17.8715 5.4217 8.8353 36.1446 46.1847 0 1.2048 3.012 0 58.8353 0.2008 0 0.8032 3.2129 t 0 0 0 0 12.8514 14.257 17.2691 15.0602 24.498 19.2771 12.0482 41.7671 0 0 22.2892 0.6024 0 28.3133 17.0683

M04657_2.00_shift5 (KLF14)
; positions_7nt_m3 versus M04657_2.00 (KLF14); m=88/154; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.51738; -----srcCaCGCCCmcy- ; cor=; Ncor= a 0 0 0 0 0 24.251 42.2284 16.4532 5.29267 65.2909 2.21104 18.4092 0.217797 0.265128 0.689655 35.1905 10.5908 19.8902 0 c 0 0 0 0 0 26.5725 11.9261 63.3006 87.1854 18.7423 97.2095 2.73727 99.1755 99.423 86.2069 52.5107 61.7582 39.8745 0 g 0 0 0 0 0 28.5961 38.409 8.59895 1.31291 11.4093 0.21348 71.5167 0.0777847 0.311915 0.351589 1.89847 6.2606 13.3804 0 t 0 0 0 0 0 20.5804 7.43645 11.6473 6.20897 4.55756 0.365965 7.33677 0.528936 0 12.7519 10.4003 21.3904 26.8549 0

M04559_2.00_shift5 (SP3,SP6)
; positions_7nt_m3 versus M04559_2.00 (SP3,SP6); m=89/154; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.516559; -----sgCCMCGCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 18.12 23.453 11.418 5.5243 73.9408 0 14.5351 0 0 0.185874 48.8032 4.24892 21.0642 0 c 0 0 0 0 0 30.96 6.35643 77.1332 85.2344 25.9592 100 0 99.4628 100 84.4711 42.5361 75.2961 41.0082 0 g 0 0 0 0 0 26.08 60.8498 3.00879 1.15942 0.019984 0 70.9581 0.0198965 0 0 0.511602 1.74845 7.9816 0 t 0 0 0 0 0 24.84 9.34075 8.44006 8.08184 0.0799361 0 14.5067 0.51731 0 15.343 8.1491 18.7065 29.946 0

M08967_2.00_shift4 (M08967_2.00)
; positions_7nt_m3 versus M08967_2.00; m=90/154; ncol2=19; w=-4; offset=-4; strand=D; shift=4; score=0.515494; ----cckCCCCkCCCCCwc ; cor=; Ncor= a 0 0 0 0 7.6 9 7.2 0.8 3.4 1.2 2.8 6 0.2 1.8 3.4 5.2 2.4 32.2 9 c 0 0 0 0 58.2 53.2 12.8 87 82.2 93.2 84.4 1.2 98 88.4 77.6 81.8 90.2 15.8 67.4 g 0 0 0 0 21 14.4 44.2 4.4 0.4 1.6 0.6 29.2 0.4 1.4 2.8 5.2 3 22 15.2 t 0 0 0 0 13.2 23.4 35.8 7.8 14 4 12.2 63.6 1.4 8.4 16.2 7.8 4.4 30 8.4

M08882_2.00_shift6 (EGR1)
; positions_7nt_m3 versus M08882_2.00 (EGR1); m=91/154; ncol2=17; w=-2; offset=-2; strand=D; shift=6; score=0.513482; ------yyyCCrCCCmCgC ; cor=; Ncor= a 0 0 0 0 0 0 11.8 15 12.8 17.2 6 30 1.4 2.2 1.4 55.4 4 21.2 5 c 0 0 0 0 0 0 43.6 45.6 40.6 69.6 84.2 0.4 93 95.8 89.2 41 87 4.6 80.8 g 0 0 0 0 0 0 18.2 8.2 12.8 2.2 1 47.6 3.2 0.4 0.2 0.4 3.4 50.6 3 t 0 0 0 0 0 0 26.4 31.2 33.8 11 8.8 22 2.4 1.6 9.2 3.2 5.6 23.6 11.2

M04540_2.00_shift5 (KLF13)
; positions_7nt_m3 versus M04540_2.00 (KLF13); m=92/154; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.512658; -----crCCACrCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 20.513 34.9546 17.3045 1.51246 75.5084 0 30.9757 0.0176134 0.364275 0.154971 35.7388 6.61041 18.839 0 c 0 0 0 0 0 34.234 4.11928 76.293 95.8513 18.075 99.9119 0 99.9031 99.5743 90.1534 55.83 73.1145 43.0158 0 g 0 0 0 0 0 22.3246 57.854 2.4346 1.62653 5.56794 0 65.2592 0.00440335 0.0351108 0.107288 0.799128 2.66336 10.2878 0 t 0 0 0 0 0 22.9284 3.07208 3.96799 1.00972 0.84867 0.0880747 3.76517 0.0748569 0.0263331 9.58436 7.63208 17.6118 27.8574 0

M04538_2.00_shift5 (KLF13)
; positions_7nt_m3 versus M04538_2.00 (KLF13); m=93/154; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.508449; -----crCCACRCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 19.2843 33.2076 18.5758 1.25656 80.2155 0 28.5787 0 0.126017 0.0174972 33.8885 5.28546 18.457 0 c 0 0 0 0 0 37.2752 4.84968 74.7925 96.574 13.6604 100 0 100 99.7862 91.4439 59.5032 76.796 44.2501 0 g 0 0 0 0 0 21.3509 58.8905 2.47009 1.45613 5.61149 0 69.5658 0 0.0305495 0.139978 0.45747 1.64547 9.06969 0 t 0 0 0 0 0 22.0896 3.0522 4.16166 0.713283 0.512647 0 1.85555 0 0.0572803 8.39866 6.15082 16.2731 28.2232 0

M02910_2.00_shift6 (SP3,SP6)
; positions_7nt_m3 versus M02910_2.00 (SP3,SP6); m=94/154; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.506602; ------sCCACrCCCmc-- ; cor=; Ncor= a 0 0 0 0 0 0 22.3999 17.6351 8.55439 71.6826 2.25957 26.1176 2.06696 2.5942 0.957055 43.3481 12.7548 0 0 c 0 0 0 0 0 0 30.0549 70.9806 83.8812 23.8364 93.3343 3.89076 96.2009 95.7826 81.092 45.3752 55.8995 0 0 g 0 0 0 0 0 0 35.5782 4.23155 3.17299 2.67418 1.2004 55.5378 0.55313 0.768116 1.5092 2.34931 9.05016 0 0 t 0 0 0 0 0 0 11.9671 7.15283 4.39142 1.80688 3.20576 14.4538 1.17904 0.855072 16.4417 8.92737 22.2955 0 0

M04537_2.00_shift5 (KLF13)
; positions_7nt_m3 versus M04537_2.00 (KLF13); m=95/154; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score= 0.5051; -----crCCACRCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 23.8837 39.5377 16.4845 4.1606 76.1744 0.202505 25.201 0.217115 0.321351 0.192691 39.3057 7.57222 19.0559 0 c 0 0 0 0 0 31.1724 11.4831 71.5224 92.0949 21.3192 99.61 0.889699 99.431 99.2527 91.3977 51.1096 70.0514 40.3629 0 g 0 0 0 0 0 24.2527 43.8909 6.20389 0.811317 1.99025 0 71.1813 0.164708 0.246618 0.144519 0.680735 3.81613 13.0402 0 t 0 0 0 0 0 20.6912 5.08826 5.78922 2.93322 0.516203 0.187505 2.72805 0.187168 0.179359 8.26509 8.90402 18.5603 27.541 0

M04468_2.00_shift9 (ZNF740)
; positions_7nt_m3 versus M04468_2.00 (ZNF740); m=96/154; ncol2=13; w=0; offset=1; strand=D; shift=9; score=0.503344; ---------cygCCCCCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 10.4898 3.7037 13.6842 3.32393 0.10327 0.892538 0.757303 2.56321 1.37761 2.66999 c 0 0 0 0 0 0 0 0 0 61.1477 45.0794 12.2978 85.5127 93.8726 96.9654 98.7018 92.345 96.609 97.33 g 0 0 0 0 0 0 0 0 0 11.0015 3.59788 58.6906 10.5989 1.13597 1.21385 0.036062 0.311742 0 0 t 0 0 0 0 0 0 0 0 0 17.3611 47.619 15.3273 0.56444 4.88812 0.92824 0.504868 4.78005 2.01342 0

M08884_2.00_shift7 (EGR2)
; positions_7nt_m3 versus M08884_2.00 (EGR2); m=97/154; ncol2=18; w=-1; offset=-1; strand=D; shift=7; score=0.500684; -------yyCCdCCCmCwC ; cor=; Ncor= a 0 0 0 0 0 0 0 13.6 8.2 10.8 6.2 34.6 2 6 1.8 48.6 1.4 39.6 5.6 c 0 0 0 0 0 0 0 56.2 50.2 78.2 87.4 2.2 91.6 89 79.4 46.2 93 4.4 76.6 g 0 0 0 0 0 0 0 4.8 7.4 3.4 0.6 28.2 4 1.4 0.6 1.2 2.2 19 10.2 t 0 0 0 0 0 0 0 25.4 34.2 7.6 5.8 35 2.4 3.6 18.2 4 3.4 37 7.6

M04386_2.00_shift6 (ZNF263)
; positions_7nt_m3 versus M04386_2.00 (ZNF263); m=98/154; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.498041; ------vGTsCTCCCy--- ; cor=; Ncor= a 0 0 0 0 0 0 29.7705 4.34783 0 3.37328 3.93013 2.36613 0 0.455433 10.6842 14.6885 0 0 0 c 0 0 0 0 0 0 36.7869 7.37986 2.98982 27.2526 95.1341 2.67746 96.764 99.2193 80.2632 32.6557 0 0 0 g 0 0 0 0 0 0 25.9016 87.2426 0 67.6875 0 0 0 0.325309 2.78947 20.9836 0 0 0 t 0 0 0 0 0 0 7.54098 1.02975 97.0102 1.68664 0.935745 94.9564 3.23604 0 6.26316 31.6721 0 0 0

M04387_2.00_shift6 (ZNF263)
; positions_7nt_m3 versus M04387_2.00 (ZNF263); m=99/154; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.495608; ------sGTsCTCCCy--- ; cor=; Ncor= a 0 0 0 0 0 0 21.9248 3.01455 0 2.60736 2.69984 1.6333 0.662617 4.82615 17.0004 20.5464 0 0 0 c 0 0 0 0 0 0 45.1025 3.69023 5.79088 28.9494 93.0122 5.79557 97.0182 91.178 71.8022 34.5475 0 0 0 g 0 0 0 0 0 0 25.8542 91.3202 0 67.3696 2.17046 0 2.31916 2.02387 2.86065 13.0336 0 0 0 t 0 0 0 0 0 0 7.11845 1.97505 94.2091 1.07362 2.11752 92.5711 0 1.97198 8.33674 31.8725 0 0 0

M08287_2.00_shift7 (PATZ1)
; positions_7nt_m3 versus M08287_2.00 (PATZ1); m=100/154; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score=0.493575; -------CCCCkCCC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 7.7333 0 0 22.1333 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 94.1333 81.0667 100 100 0 100 100 84 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 35.2 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 5.8667 11.2 0 0 42.6667 0 0 16 0 0 0 0

M08342_2.00_shift3 (ZNF596)
; positions_7nt_m3 versus M08342_2.00 (ZNF596); m=101/154; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.492132; ---kCTCkSbCTCyyycy- ; cor=; Ncor= a 0 0 0 0.123152 0.123152 0.123152 0.123152 9.97496 0.123152 7.51224 0.123152 0.123152 0.123152 14.4087 2.58681 3.5714 5.54229 7.01949 0 c 0 0 0 4.55661 99.6305 8.99069 98.6453 3.07879 28.2023 32.6358 99.6305 0.615758 99.6305 47.4143 50.8622 28.2022 67.61 27.7096 0 g 0 0 0 62.6845 0.123152 2.09342 1.10836 42.4885 69.0883 29.68 0.123152 0.123152 0.123152 4.064 14.9013 20.8132 11.4537 17.8576 0 t 0 0 0 32.6358 0.123152 88.7927 0.123152 44.4577 2.58618 30.172 0.123152 99.1379 0.123152 34.113 31.6496 47.4132 15.3939 47.4133 0

M08968_2.00_shift1 (M08968_2.00)
; positions_7nt_m3 versus M08968_2.00; m=102/154; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.491861; -CycCycCyCCTCCYyCbC ; cor=; Ncor= a 0 2.6 5 3.8 6 9.2 5.6 1.2 3.8 4.4 1 2.2 0 1.2 0.8 6.2 1.4 14.6 3.8 c 0 68 47.2 67.4 75.2 38.8 51.6 71.4 38.6 90.8 97 0.4 97.2 95.6 71.4 59.6 80.4 27.6 76.2 g 0 8 10.8 9.4 6.8 21.4 18.6 3.6 10 1.2 0.8 14.8 1.6 2.6 2.6 5.2 8.4 30.4 11.2 t 0 21.4 37 19.4 12 30.6 24.2 23.8 47.6 3.6 1.2 82.6 1.2 0.6 25.2 29 9.8 27.4 8.8

M08937_2.00_shift1 (WT1)
; positions_7nt_m3 versus M08937_2.00 (WT1); m=103/154; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.491861; -CycCycCyCCTCCYyCbC ; cor=; Ncor= a 0 2.6 5 3.8 6 9.2 5.6 1.2 3.8 4.4 1 2.2 0 1.2 0.8 6.2 1.4 14.6 3.8 c 0 68 47.2 67.4 75.2 38.8 51.6 71.4 38.6 90.8 97 0.4 97.2 95.6 71.4 59.6 80.4 27.6 76.2 g 0 8 10.8 9.4 6.8 21.4 18.6 3.6 10 1.2 0.8 14.8 1.6 2.6 2.6 5.2 8.4 30.4 11.2 t 0 21.4 37 19.4 12 30.6 24.2 23.8 47.6 3.6 1.2 82.6 1.2 0.6 25.2 29 9.8 27.4 8.8

M08086_2.00_shift6 (KLF5)
; positions_7nt_m3 versus M08086_2.00 (KLF5); m=104/154; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.490279; ------gCCMCrCCCh--- ; cor=; Ncor= a 0 0 0 0 0 0 10.4989 0 0 25.5455 0 37.1097 0 0 0 28.7635 0 0 0 c 0 0 0 0 0 0 14.863 87.4293 88.2228 70.3034 100 0 100 100 96.5028 41.1065 0 0 0 g 0 0 0 0 0 0 55.6315 0 0 0 0 38.0721 0 0 0 0 0 0 0 t 0 0 0 0 0 0 19.0067 12.5707 11.7772 4.15105 0 24.8182 0 0 3.49717 30.13 0 0 0

M00231_2.00_shift12 (EGR2)
; positions_7nt_m3 versus M00231_2.00 (EGR2); m=105/154; ncol2=8; w=0; offset=4; strand=D; shift=12; score=0.485953; ------------mCCmCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 36.8338 0.0120424 0.0120424 43.3646 0.0120424 10.9824 0.013151 c 0 0 0 0 0 0 0 0 0 0 0 0 56.1185 99.9639 99.9639 56.6113 98.7596 2.45002 93.3851 g 0 0 0 0 0 0 0 0 0 0 0 0 1.77069 0.0120424 0.0120424 0.0120424 1.21628 84.1175 0.013151 t 0 0 0 0 0 0 0 0 0 0 0 0 5.277 0.0120424 0.0120424 0.0120424 0.0120424 2.45002 6.58864

M06117_2.00_shift6 (SP6)
; positions_7nt_m3 versus M06117_2.00 (SP6); m=106/154; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.485857; ------gmymCGCCCmc-- ; cor=; Ncor= a 0 0 0 0 0 0 18.1818 27.2727 0 54.5455 0 4.54545 4.54545 0 0 54.5455 4.54545 0 0 c 0 0 0 0 0 0 4.54545 45.4545 59.0909 45.4545 100 0 95.4545 100 86.3636 31.8182 63.6364 0 0 g 0 0 0 0 0 0 59.0909 9.09091 0 0 0 86.3636 0 0 0 0 13.6364 0 0 t 0 0 0 0 0 0 18.1818 18.1818 40.9091 0 0 9.09091 0 0 13.6364 13.6364 18.1818 0 0

M08878_2.00_shift4 (ZBTB17)
; positions_7nt_m3 versus M08878_2.00 (ZBTB17); m=107/154; ncol2=19; w=-4; offset=-4; strand=D; shift=4; score=0.485622; ----yykYCCcTCCCCCwc ; cor=; Ncor= a 0 0 0 0 12 18.6 6 2.6 2 4.6 23.2 10.2 0.4 5.2 4.4 9 0.8 45.8 9.2 c 0 0 0 0 50.8 33.2 13.6 71 72.6 88.6 53.8 0.2 85 79 68.4 68 81.2 9.4 57.2 g 0 0 0 0 11.4 6.2 27.6 0.8 2.2 1.6 3.2 20 7.4 0.6 3.4 2.6 4 12.8 13.6 t 0 0 0 0 25.8 42 52.8 25.6 23.2 5.2 19.8 69.6 7.2 15.2 23.8 20.4 14 32 20

M08296_2.00_shift3 (SP4)
; positions_7nt_m3 versus M08296_2.00 (SP4); m=108/154; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.485001; ---yhgGCyCCgCCYCcy- ; cor=; Ncor= a 0 0 0 15.7895 32.5911 24.2915 11.5385 1.8219 5.2632 12.1457 0 12.5506 0.2024 0 0 21.8623 12.1457 15.7895 0 c 0 0 0 42.5101 26.5182 18.8259 11.1336 75.9109 56.2753 83.4008 98.583 0 99.7976 99.7976 68.6235 70.2429 63.9676 45.3441 0 g 0 0 0 12.9555 14.9798 48.583 69.8381 7.085 3.4413 2.6316 1.417 67.6113 0 0 1.0121 0 4.8583 5.8704 0 t 0 0 0 28.7449 25.9109 8.2996 7.4899 15.1822 35.0202 1.8219 0 19.8381 0 0.2024 30.3644 7.8947 19.0283 32.996 0

M08326_2.00_shift7 (SP2)
; positions_7nt_m3 versus M08326_2.00 (SP2); m=109/154; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.483682; -------cCCCGCCCc--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.083612 6.77258 2.42475 0.083612 6.43813 0.083612 0.083612 0.083612 22.4916 0 0 0 c 0 0 0 0 0 0 0 63.6288 74.3311 97.408 99.7492 0.083612 99.7492 99.7492 99.7492 64.9666 0 0 0 g 0 0 0 0 0 0 0 14.7993 0.083612 0.083612 0.083612 93.3946 0.083612 0.083612 0.083612 1.08696 0 0 0 t 0 0 0 0 0 0 0 21.4883 18.8127 0.083612 0.083612 0.083612 0.083612 0.083612 0.083612 11.4548 0 0 0

M01864_2.00_shift12 (M01864_2.00)
; positions_7nt_m3 versus M01864_2.00; m=110/154; ncol2=9; w=0; offset=4; strand=D; shift=12; score=0.482923; ------------CCCmCGc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 16.0527 1.55222 2.3878 48.8627 1.22013 16.7571 8.3944 c 0 0 0 0 0 0 0 0 0 0 0 0 73.3965 93.6616 88.2675 47.8952 96.4432 2.79778 59.0016 g 0 0 0 0 0 0 0 0 0 0 0 0 4.64539 4.13583 1.01043 1.76653 0.65636 68.6365 10.4601 t 0 0 0 0 0 0 0 0 0 0 0 0 5.90545 0.650307 8.33424 1.47553 1.68027 11.8086 22.144

M02932_2.00_shift7 (M02932_2.00)
; positions_7nt_m3 versus M02932_2.00; m=111/154; ncol2=16; w=-1; offset=-1; strand=D; shift=7; score=0.481697; -------mhmCGCCCmCkC ; cor=; Ncor= a 0 0 0 0 0 0 0 32.3142 32.2785 61.8182 0 7.54445 0 0.157812 0 51.7114 0.314961 0.422833 0.157978 c 0 0 0 0 0 0 0 32.4196 30.9072 36.6753 99.6845 0.432484 99.9473 99.737 100 48.1306 99.5276 16.7321 99.842 g 0 0 0 0 0 0 0 11.3337 3.69198 0.363636 0.0525762 91.11 0.0527148 0.105208 0 0.157978 0 25.5814 0 t 0 0 0 0 0 0 0 23.9325 33.1224 1.14286 0.262881 0.913023 0 0 0 0 0.15748 57.2637 0

M00766_2.00_shift7 (M00766_2.00)
; positions_7nt_m3 versus M00766_2.00; m=112/154; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score=0.480393; -------GTsCTCCc---- ; cor=; Ncor= a 0 0 0 0 0 0 0 4.54545 3.57143 3.57143 21.4286 3.57143 3.57143 11.5385 10 0 0 0 0 c 0 0 0 0 0 0 0 9.09091 3.57143 39.2857 71.4286 3.57143 89.2857 80.7692 60 0 0 0 0 g 0 0 0 0 0 0 0 81.8182 3.57143 53.5714 3.57143 3.57143 3.57143 3.84615 15 0 0 0 0 t 0 0 0 0 0 0 0 4.54545 89.2857 3.57143 3.57143 89.2857 3.57143 3.84615 15 0 0 0 0

M02663_2.00_shift11 (MZF1)
; positions_7nt_m3 versus M02663_2.00 (MZF1); m=113/154; ncol2=6; w=0; offset=3; strand=D; shift=11; score=0.480242; -----------TCCCCr-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 5 40 0 0 c 0 0 0 0 0 0 0 0 0 0 0 10 100 95 90 95 20 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 t 0 0 0 0 0 0 0 0 0 0 0 90 0 0 10 0 15 0 0

M07669_2.00_rc_shift7 (ZNF730_rc)
; positions_7nt_m3 versus M07669_2.00_rc (ZNF730_rc); m=114/154; ncol2=9; w=-1; offset=-1; strand=R; shift=7; score=0.476451; -------TrGCtkCCC--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.247525 56.6832 0.247525 0.247525 21.0396 0.247525 0.247525 0.247525 10.1485 0 0 0 c 0 0 0 0 0 0 0 0.247525 0.247525 15.099 99.2574 14.1089 13.1188 99.2574 99.2574 75.495 0 0 0 g 0 0 0 0 0 0 0 0.247525 35.8911 69.5545 0.247525 6.18812 35.8911 0.247525 0.247525 0.247525 0 0 0 t 0 0 0 0 0 0 0 99.2574 7.17822 15.099 0.247525 58.6634 50.7426 0.247525 0.247525 14.1089 0 0 0

M05846_2.00_shift2 (CTCF)
; positions_7nt_m3 versus M05846_2.00 (CTCF); m=115/154; ncol2=17; w=-6; offset=-6; strand=D; shift=2; score=0.475676; --cscwmyasCgCCcCCtw ; cor=; Ncor= a 0 0 15.4 14.5 17.5 31.6 39.5 11.8 46.5 16.2 2.5 8.1 5.4 1.8 12.4 4.3 8.8 17.9 37.2 c 0 0 44.8 40.6 42.1 20.3 36.3 33.9 18.1 25.1 77.1 13.4 80.3 92.7 66.5 80.3 77.9 15.4 10.6 g 0 0 15.9 26.4 21.5 20.4 9.9 19.6 17.9 50.7 5.3 64.3 10.9 4 15.4 1.9 7 4 21 t 0 0 23.9 18.4 18.9 27.6 14.3 34.8 17.5 8 15.1 14.3 3.4 1.5 5.7 13.6 6.3 62.8 31.2

M01172_2.00_shift11 (VEZF1)
; positions_7nt_m3 versus M01172_2.00 (VEZF1); m=116/154; ncol2=10; w=0; offset=3; strand=D; shift=11; score= 0.4742; -----------CCCCCCmy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 7.173 0.17421 0.427526 0.21282 0.666427 1.00267 40.685 4.47697 c 0 0 0 0 0 0 0 0 0 0 0 79.0692 99.7338 99.5102 99.7526 98.9066 97.7743 35.7253 55.0887 g 0 0 0 0 0 0 0 0 0 0 0 13.7402 0.0839533 0.0167436 0.0014197 0.00207909 0.333758 11.088 7.02128 t 0 0 0 0 0 0 0 0 0 0 0 0.0176032 0 0.0455138 0.0331303 0.424933 0.889284 12.5016 33.413

M07754_2.00_shift10 (ZNF468)
; positions_7nt_m3 versus M07754_2.00 (ZNF468); m=117/154; ncol2=12; w=0; offset=2; strand=D; shift=10; score=0.473193; ----------CrCCCCCTC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 16.3043 42.6812 0.942029 0.0724638 0.0724638 0.0724638 0.0724638 2.97101 0.0724638 c 0 0 0 0 0 0 0 0 0 0 77.7536 0.942029 84.7101 98.913 88.4783 99.7826 99.4928 0.0724638 99.7826 g 0 0 0 0 0 0 0 0 0 0 2.10145 46.1594 9.92754 0.362319 0.0724638 0.0724638 0.0724638 0.652174 0.0724638 t 0 0 0 0 0 0 0 0 0 0 3.84058 10.2174 4.42029 0.652174 11.3768 0.0724638 0.362319 96.3043 0.0724638

M07652_2.00_shift4 (ZNF543)
; positions_7nt_m3 versus M07652_2.00 (ZNF543); m=118/154; ncol2=12; w=-4; offset=-4; strand=D; shift=4; score=0.468282; ----sGsCCCCKCCcs--- ; cor=; Ncor= a 0 0 0 0 3.72984 0.100806 0.504032 0.100806 0.100806 0.100806 0.100806 0.100806 0.100806 11.3911 14.2137 6.55242 0 0 0 c 0 0 0 0 31.9556 0.100806 50.1008 96.875 70.2621 87.6008 99.6976 0.504032 98.8911 88.4073 51.3105 50.9073 0 0 0 g 0 0 0 0 64.2137 88.4073 30.746 0.100806 9.375 8.97177 0.100806 25.9073 0.504032 0.100806 20.6653 29.1331 0 0 0 t 0 0 0 0 0.100806 11.3911 18.6492 2.92339 20.2621 3.32661 0.100806 73.4879 0.504032 0.100806 13.8105 13.4073 0 0 0

M00617_2.00_shift7 (M00617_2.00)
; positions_7nt_m3 versus M00617_2.00; m=119/154; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.466688; -------ccmCGCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 0 23.489 19.4417 52.2892 0.827505 19.3067 3.00723e-10 0.283087 0.101233 35.4676 0 0 0 c 0 0 0 0 0 0 0 38.3414 47.819 36.118 98.5594 3.09116e-07 99.9999 99.2854 80.6139 23.3039 0 0 0 g 0 0 0 0 0 0 0 14.6807 9.46331 5.97026 6.91425e-05 72.9993 3.40174e-19 0.430847 0.375188 8.48772 0 0 0 t 0 0 0 0 0 0 0 23.489 23.276 5.62258 0.61303 7.69407 0 0 18.9096 32.7408 0 0 0

M08261_2.00_shift9 (ZSCAN22)
; positions_7nt_m3 versus M08261_2.00 (ZSCAN22); m=120/154; ncol2=15; w=0; offset=1; strand=D; shift=9; score=0.463463; ---------CCTCCtCCmT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 4.6 1.4 4.2 3.2 0.6 10.2 1.4 0.4 37.8 2 c 0 0 0 0 0 0 0 0 0 83.4 91 4.6 94 79.8 11.8 97.4 93.4 47.6 4.2 g 0 0 0 0 0 0 0 0 0 4 1.6 13.4 1.4 0.4 24.2 0.2 1.2 9 0.2 t 0 0 0 0 0 0 0 0 0 8 6 77.8 1.4 19.2 53.8 1 5 5.6 93.6

M04457_2.00_shift6 (KLF16)
; positions_7nt_m3 versus M04457_2.00 (KLF16); m=121/154; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.462233; ------rcCmCgCCCm--- ; cor=; Ncor= a 0 0 0 0 0 0 32.0237 21.6005 9.64297 56.0179 0 23.6651 2.08927 5.70598 7.5165 27.5834 0 0 0 c 0 0 0 0 0 0 22.5292 57.0911 77.8929 27.5676 97.7205 13.1345 92.8205 88.8061 78.6577 52.9773 0 0 0 g 0 0 0 0 0 0 35.8502 11.3551 4.04845 9.23888 0 56.8721 1.82336 3.18008 3.21906 3.76509 0 0 0 t 0 0 0 0 0 0 9.59689 9.95327 8.41568 7.17561 2.27954 6.32828 3.26686 2.30783 10.6068 15.6742 0 0 0

M08290_2.00_shift6 (MAZ)
; positions_7nt_m3 versus M08290_2.00 (MAZ); m=122/154; ncol2=9; w=-2; offset=-2; strand=D; shift=6; score=0.461201; ------sCCCCkCCC---- ; cor=; Ncor= a 0 0 0 0 0 0 2.21823 0.059952 0.059952 0.059952 0.059952 8.93285 0.059952 0.059952 0.059952 0 0 0 0 c 0 0 0 0 0 0 52.8177 92.1463 99.8201 99.8201 99.8201 0.059952 99.8201 99.8201 88.789 0 0 0 0 g 0 0 0 0 0 0 37.7098 0.059952 0.059952 0.059952 0.059952 35.3118 0.059952 0.059952 0.059952 0 0 0 0 t 0 0 0 0 0 0 7.2542 7.73381 0.059952 0.059952 0.059952 55.6954 0.059952 0.059952 11.0911 0 0 0 0

M07727_2.00_shift4 (ZNF460)
; positions_7nt_m3 versus M07727_2.00 (ZNF460); m=123/154; ncol2=12; w=-4; offset=-4; strand=D; shift=4; score=0.461095; ----cgCCrCCkCCCC--- ; cor=; Ncor= a 0 0 0 0 15.7 0.1 0.1 4.1 26.5 0.1 0.1 10.5 0.1 0.1 3.7 3.7 0 0 0 c 0 0 0 0 66.9 23.3 85.3 95.7 9.7 99.7 99.7 0.1 99.7 77.7 77.3 68.1 0 0 0 g 0 0 0 0 17.3 66.1 14.5 0.1 50.1 0.1 0.1 28.5 0.1 22.1 4.5 18.9 0 0 0 t 0 0 0 0 0.1 10.5 0.1 0.1 13.7 0.1 0.1 60.9 0.1 0.1 14.5 9.3 0 0 0

M08445_2.00_shift10 (INSM1)
; positions_7nt_m3 versus M08445_2.00 (INSM1); m=124/154; ncol2=12; w=0; offset=2; strand=D; shift=10; score=0.454236; ----------ygcCCCCwk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 8.33333 20.8333 25 0 0 0 0 33.3333 12.5 c 0 0 0 0 0 0 0 0 0 0 50 0 66.6667 100 100 95.8333 100 0 0 g 0 0 0 0 0 0 0 0 0 0 0 66.6667 8.33333 0 0 4.16667 0 0 62.5 t 0 0 0 0 0 0 0 0 0 0 41.6667 12.5 0 0 0 0 0 66.6667 25

M07751_2.00_shift3 (ZNF534)
; positions_7nt_m3 versus M07751_2.00 (ZNF534); m=125/154; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.452362; ---vggyTCTykCCCCcc- ; cor=; Ncor= a 0 0 0 32.329 11.1564 24.8371 6.92182 1.7101 0.0814332 0.0814332 0.0814332 0.407166 0.407166 0.0814332 0.0814332 15.0651 8.87622 6.92182 0 c 0 0 0 26.1401 17.0195 17.0195 30.7003 1.05863 99.7557 14.4137 64.5765 0.0814332 99.1042 87.3779 99.43 69.4625 49.5928 61.645 0 g 0 0 0 32.329 60.342 54.4788 12.4593 8.22476 0.0814332 0.0814332 0.0814332 53.5016 0.0814332 0.0814332 0.0814332 7.24756 17.9967 12.1336 0 t 0 0 0 9.20195 11.4821 3.6645 49.9186 89.0065 0.0814332 85.4235 35.2606 46.0098 0.407166 12.4593 0.407166 8.22476 23.5342 19.2997 0

M06159_2.00_shift3 (M06159_2.00)
; positions_7nt_m3 versus M06159_2.00; m=126/154; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.452071; ---ktgRCCmCGCCCmyh- ; cor=; Ncor= a 0 0 0 4.16667 25 20.8333 25 0 0 41.6667 0 4.16667 0 0 0 33.3333 4.34783 26.087 0 c 0 0 0 4.16667 12.5 8.33333 0 87.5 83.3333 58.3333 100 4.16667 100 100 95.8333 58.3333 47.8261 26.087 0 g 0 0 0 29.1667 8.33333 54.1667 75 0 4.16667 0 0 83.3333 0 0 0 4.16667 17.3913 8.69565 0 t 0 0 0 62.5 54.1667 16.6667 0 12.5 12.5 0 0 8.33333 0 0 4.16667 4.16667 30.4348 39.1304 0

M00779_2.00_shift6 (M00779_2.00)
; positions_7nt_m3 versus M00779_2.00; m=127/154; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.450425; ------rccmCrCCYh--- ; cor=; Ncor= a 0 0 0 0 0 0 27.1429 23.9158 19.9845 44.052 6.52389 36.7441 3.85933 3.10594 4.58462 32.2624 0 0 0 c 0 0 0 0 0 0 17.8341 41.8687 46.7566 34.3077 84.3918 0.00329278 94.6792 96.8649 70.2954 25.126 0 0 0 g 0 0 0 0 0 0 36.2745 15.4026 12.8707 12.0056 0.00980827 49.5994 0.013043 0.0134782 0.0240579 15.3929 0 0 0 t 0 0 0 0 0 0 18.7485 18.8128 20.3882 9.6347 9.07452 13.6533 1.44845 0.0156594 25.0959 27.2187 0 0 0

M00134_2.00_shift6 (M00134_2.00)
; positions_7nt_m3 versus M00134_2.00; m=128/154; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.444843; ------gccmCgCCCh--- ; cor=; Ncor= a 0 0 0 0 0 0 23.4441 21.9242 17.7318 51.5538 0.989471 22.8736 0.00886864 0.0191497 0.112067 34.2124 0 0 0 c 0 0 0 0 0 0 18.0766 49.7789 53.8047 35.2557 97.4574 1.03044 99.9596 99.9363 82.3801 25.8571 0 0 0 g 0 0 0 0 0 0 41.4554 11.5605 7.65501 8.95871 0.0320459 66.0217 0.0241075 0.0173274 0.0228534 7.71053 0 0 0 t 0 0 0 0 0 0 17.0239 16.7365 20.8085 4.2318 1.52107 10.0743 0 0.0271748 17.485 32.22 0 0 0

M11228_2.00_rc_shift6 (NFKB1_rc)
; positions_7nt_m3 versus M11228_2.00_rc (NFKB1_rc); m=129/154; ncol2=10; w=-2; offset=-2; strand=R; shift=6; score=0.443548; ------GGGrATCCCC--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11.1111 55.5556 83.3333 5.55556 0 0 0 0 0 0 0 c 0 0 0 0 0 0 5.55556 0 0 5.55556 16.6667 0 88.8889 100 100 100 0 0 0 g 0 0 0 0 0 0 94.4444 100 88.8889 38.8889 0 5.55556 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 88.8889 11.1111 0 0 0 0 0 0

M08361_2.00_shift6 (ZSCAN22)
; positions_7nt_m3 versus M08361_2.00 (ZSCAN22); m=130/154; ncol2=18; w=-2; offset=-2; strand=D; shift=6; score=0.441568; ------cyGCCTCCkCCmT ; cor=; Ncor= a 0 0 0 0 0 0 10.4947 19.5856 7.01872 2.20588 1.40374 2.20588 0.0668449 0.0668449 7.82086 0.0668449 0.601604 38.3021 3.54278 c 0 0 0 0 0 0 47.1257 30.8155 6.21658 85.8957 93.6497 3.81016 99.2647 87.7674 13.4358 97.1257 90.1738 41.2433 2.20588 g 0 0 0 0 0 0 24.3984 24.3984 76.5374 2.74064 0.601604 21.7246 0.601604 0.601604 40.9759 0.0668449 2.20588 16.1096 0.0668449 t 0 0 0 0 0 0 17.9813 25.2005 10.2273 9.15775 4.34492 72.2594 0.0668449 11.5642 37.7674 2.74064 7.01872 4.34492 94.1845

M04606_2.00_shift3 (SP1)
; positions_7nt_m3 versus M04606_2.00 (SP1); m=131/154; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.441126; ---twrGCCmCGCCCmCw- ; cor=; Ncor= a 0 0 0 16.9909 56.8037 51.2491 18.8739 5.40541 0.947551 64.5165 0.218648 12.3046 0 0 0 52.4992 4.05832 28.9973 0 c 0 0 0 22.2937 5.17881 2.43829 1.62252 91.9364 84.7191 33.994 99.4534 1.27804 100 100 93.8199 43.1881 71.4114 22.203 0 g 0 0 0 16.7869 2.76005 42.8571 77.9504 1.0395 0.987588 1.06907 0 80.2991 0 0 0.120882 0.563852 2.16444 6.4177 0 t 0 0 0 43.9285 35.2575 3.4555 1.55318 1.61865 13.3458 0.42042 0.327971 6.11829 0 0 6.05923 3.74886 22.3658 42.3819 0

M06160_2.00_shift3 (M06160_2.00)
; positions_7nt_m3 versus M06160_2.00; m=132/154; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.440258; ---kwrGCCmCGCCCmcy- ; cor=; Ncor= a 0 0 0 11.04 33.6 27.8219 17.3291 6.51828 4.45151 39.4277 0.63593 3.6566 0.794913 0.63593 1.27186 43.0843 7.3955 22.8525 0 c 0 0 0 19.04 8.96 11.2878 0.953895 81.2401 72.496 60.5723 99.2051 0 99.2051 99.3641 81.876 42.1304 62.701 27.2285 0 g 0 0 0 25.12 14.4 42.4483 74.2448 5.40541 1.27186 0 0 90.461 0 0 0 1.43084 7.55627 13.128 0 t 0 0 0 44.8 43.04 18.442 7.47218 6.83625 21.7806 0 0.158983 5.88235 0 0 16.8521 13.3545 22.3473 36.7909 0

M07844_2.00_shift3 (ZNF263)
; positions_7nt_m3 versus M07844_2.00 (ZNF263); m=133/154; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.440126; ---ccycyycsTCCTCCC- ; cor=; Ncor= a 0 0 0 12.5843 8.5393 12.1348 8.98879 15.0562 4.0449 19.5506 3.5955 1.3483 0.2247 2.2472 0 0 1.7978 6.9663 0 c 0 0 0 57.3034 58.2022 32.3596 64.4943 29.4382 45.618 59.5505 55.2809 6.2921 78.6517 97.3034 0 95.5056 95.5055 69.6629 0 g 0 0 0 13.2584 12.5843 10.3371 17.0787 17.5281 19.3258 12.3596 31.236 0 19.3258 0 0 0.6742 0.674199 1.7978 0 t 0 0 0 16.8539 20.6742 45.1685 9.43819 37.9775 31.0112 8.53929 9.8876 92.3596 1.7978 0.4494 100 3.8202 2.0225 21.573 0

M08920_2.00_shift1 (SP3,SP6)
; positions_7nt_m3 versus M08920_2.00 (SP3,SP6); m=134/154; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.438025; -cscysgCCCCgCCCccyc ; cor=; Ncor= a 0 12.6205 11.5512 11.6114 15.9639 20.5271 9.27711 3.70482 5.63253 10.6325 3.10241 8.73494 0.451807 0.993976 0.421687 16.5964 7.37952 11.5211 11.2952 c 0 44.9849 45.5572 51.5813 44.9849 31.5512 23.9157 73.4639 71.9277 87.1687 89.0211 5.06024 96.6265 97.741 85.4819 63.8253 55.4669 38.9307 43.9006 g 0 24.1867 26.506 16.747 13.2982 36.7169 55.3916 13.3133 3.49398 1.4759 3.43373 62.756 1.95783 1.0241 0.240964 7.5 19.9699 21.9277 22.003 t 0 18.2078 16.3855 20.0602 25.753 11.2048 11.4157 9.51807 18.9458 0.722892 4.44277 23.4488 0.963855 0.240964 13.8554 12.0783 17.1837 27.6205 22.8012

M08978_2.00_shift1 (M08978_2.00)
; positions_7nt_m3 versus M08978_2.00; m=135/154; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.438025; -cscysgCCCCgCCCccyc ; cor=; Ncor= a 0 12.6205 11.5512 11.6114 15.9639 20.5271 9.27711 3.70482 5.63253 10.6325 3.10241 8.73494 0.451807 0.993976 0.421687 16.5964 7.37952 11.5211 11.2952 c 0 44.9849 45.5572 51.5813 44.9849 31.5512 23.9157 73.4639 71.9277 87.1687 89.0211 5.06024 96.6265 97.741 85.4819 63.8253 55.4669 38.9307 43.9006 g 0 24.1867 26.506 16.747 13.2982 36.7169 55.3916 13.3133 3.49398 1.4759 3.43373 62.756 1.95783 1.0241 0.240964 7.5 19.9699 21.9277 22.003 t 0 18.2078 16.3855 20.0602 25.753 11.2048 11.4157 9.51807 18.9458 0.722892 4.44277 23.4488 0.963855 0.240964 13.8554 12.0783 17.1837 27.6205 22.8012

M00787_2.00_shift6 (M00787_2.00)
; positions_7nt_m3 versus M00787_2.00; m=136/154; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.437841; ------rccmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 25.986 23.1178 19.3153 50.6834 0.194537 30.2468 0.00336185 0.00625172 2.24714 39.1927 0 0 0 c 0 0 0 0 0 0 15.6045 47.0215 51.4647 34.6604 99.7699 0.00388508 99.9566 99.9931 79.0168 22.3872 0 0 0 g 0 0 0 0 0 0 41.1638 13.0737 10.2872 8.63306 0.00306676 62.1399 0.00261821 0.000459717 0.0148413 12.4098 0 0 0 t 0 0 0 0 0 0 17.2456 16.787 18.9328 6.02308 0.0324799 7.60943 0.0374307 0 18.7213 26.0102 0 0 0

M08935_2.00_shift9 (ZSCAN22)
; positions_7nt_m3 versus M08935_2.00 (ZSCAN22); m=137/154; ncol2=16; w=0; offset=1; strand=D; shift=9; score=0.436505; ---------CCTCCkCCmT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 3.57143 1.2605 2.94118 1.89076 1.2605 5.88235 0.840336 0.840336 25.4202 2.31092 c 0 0 0 0 0 0 0 0 0 84.6639 91.5966 2.10084 95.7983 85.9244 8.82353 95.7983 90.3361 54.6218 10.084 g 0 0 0 0 0 0 0 0 0 4.83193 0.630252 23.5294 0.420168 0.840336 31.0924 0.840336 0.420168 6.30252 1.47059 t 0 0 0 0 0 0 0 0 0 6.93277 6.51261 71.4286 1.89076 11.9748 54.2017 2.52101 8.40336 13.6555 86.1345

M08243_2.00_shift6 (KLF4)
; positions_7nt_m3 versus M08243_2.00 (KLF4); m=138/154; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.431256; ------gCCmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 21.5541 6.6731 2.8826 47.0176 0.7831 49.183 0.3685 0.2997 0.1386 40.7052 0 0 0 c 0 0 0 0 0 0 6.4761 87.4843 89.9686 50.1722 98.364 0.2536 98.4801 99.0776 97.6252 23.5703 0 0 0 g 0 0 0 0 0 0 66.0954 3.0022 1.0613 1.8427 0.346 44.1938 0.8289 0.3 0.2081 1.8688 0 0 0 t 0 0 0 0 0 0 5.8745 2.8404 6.0875 0.9675 0.5068 6.3696 0.3225 0.3227 2.028 33.8558 0 0 0

M08246_2.00_shift6 (KLF10)
; positions_7nt_m3 versus M08246_2.00 (KLF10); m=139/154; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.431256; ------gCCmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 21.554 6.673 2.8825 47.0175 0.7831 49.183 0.3685 0.2997 0.1386 40.7052 0 0 0 c 0 0 0 0 0 0 6.4761 87.4843 89.9687 50.1723 98.3641 0.2537 98.4802 99.0777 97.6252 23.5703 0 0 0 g 0 0 0 0 0 0 66.0954 3.0023 1.0613 1.8427 0.3461 44.1938 0.8289 0.3001 0.2082 1.8688 0 0 0 t 0 0 0 0 0 0 5.8745 2.8403 6.0874 0.9675 0.5068 6.3696 0.3225 0.3227 2.0279 33.8557 0 0 0

M07927_2.00_shift1 (EGR1)
; positions_7nt_m3 versus M07927_2.00 (EGR1); m=140/154; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.427528; -ccscscccCCGCCCmCGC ; cor=; Ncor= a 0 13.0705 16.1826 11.6183 17.0124 13.9004 13.0705 12.6556 12.0332 15.7676 1.0373 19.2946 0 0 0 43.5685 0 5.6017 0 c 0 48.1328 49.5851 44.1909 45.8506 38.1743 49.7925 47.3029 41.0788 76.3486 97.5104 0 100 100 94.6058 56.0166 100 0 92.1162 g 0 22.6141 22.8216 25.1037 18.4647 30.7054 20.5394 17.4274 21.9917 2.4896 0.2075 71.5768 0 0 0 0.4149 0 85.6846 4.3568 t 0 16.1826 11.4108 19.0871 18.6722 17.2199 16.5975 22.6141 24.8963 5.39421 1.2448 9.1286 0 0 5.3942 0 0 8.7137 3.527

M07929_2.00_shift0 (EGR1)
; positions_7nt_m3 versus M07929_2.00 (EGR1); m=141/154; ncol2=20; w=-8; offset=-8; strand=D; shift=0; score=0.42545; ccsccssccCCGCCCmCGC ; cor=; Ncor= a 13.9394 15.1515 12.7273 16.9697 17.1717 18.1818 10.101 16.9697 13.5354 18.3838 0.404 19.798 0 0 0 51.5151 0 7.0707 0 c 46.2626 45.6566 46.0606 44.2424 48.2828 35.5556 48.8889 44.4444 40 73.9394 97.9798 0 100 99.798 95.1515 47.6768 99.798 0.6061 90.3031 g 24.4444 22.6263 25.6566 23.0303 17.7778 29.4949 25.0505 18.7879 21.6162 0.8081 0 69.6969 0 0.202 0 0.808099 0.202 80.202 4.2424 t 15.3535 16.5657 15.5556 15.7576 16.7677 16.7677 15.9596 19.798 24.8485 6.8687 1.6162 10.5051 0 0 4.8485 0 0 12.1212 5.45451

M08987_2.00_shift0 (M08987_2.00)
; positions_7nt_m3 versus M08987_2.00; m=142/154; ncol2=19; w=-8; offset=-8; strand=D; shift=0; score=0.42457; CCycyCCcybCyCCkCCYy ; cor=; Ncor= a 6.88935 7.51566 14.6138 5.21921 3.34029 1.25261 3.13152 13.9875 20.8768 4.38413 0.835073 5.21921 8.76827 0.626305 10.8559 0.208768 0 3.34029 11.0647 c 73.0689 74.3215 44.6764 66.5971 57.62 77.0355 79.7495 58.2463 28.6013 29.8539 86.8476 42.38 88.5177 91.858 0 97.4948 99.7912 69.5198 54.2797 g 1.67015 9.39457 12.9436 10.4384 13.3612 3.13152 2.08768 4.38413 16.0752 34.4468 0.626305 3.13152 1.46138 0.626305 35.4906 0.626305 0.208768 1.25261 3.54906 t 18.3716 8.76827 27.7662 17.7453 25.6785 18.5804 15.0313 23.382 34.4468 31.3152 11.691 49.2693 1.25261 6.88935 53.6534 1.67015 0 25.8873 31.1065

M08907_2.00_shift0 (KLF15)
; positions_7nt_m3 versus M08907_2.00 (KLF15); m=143/154; ncol2=19; w=-8; offset=-8; strand=D; shift=0; score=0.42457; CCycyCCcybCyCCkCCYy ; cor=; Ncor= a 6.88935 7.51566 14.6138 5.21921 3.34029 1.25261 3.13152 13.9875 20.8768 4.38413 0.835073 5.21921 8.76827 0.626305 10.8559 0.208768 0 3.34029 11.0647 c 73.0689 74.3215 44.6764 66.5971 57.62 77.0355 79.7495 58.2463 28.6013 29.8539 86.8476 42.38 88.5177 91.858 0 97.4948 99.7912 69.5198 54.2797 g 1.67015 9.39457 12.9436 10.4384 13.3612 3.13152 2.08768 4.38413 16.0752 34.4468 0.626305 3.13152 1.46138 0.626305 35.4906 0.626305 0.208768 1.25261 3.54906 t 18.3716 8.76827 27.7662 17.7453 25.6785 18.5804 15.0313 23.382 34.4468 31.3152 11.691 49.2693 1.25261 6.88935 53.6534 1.67015 0 25.8873 31.1065

M08893_2.00_shift1 (VEZF1)
; positions_7nt_m3 versus M08893_2.00 (VEZF1); m=144/154; ncol2=22; w=-7; offset=-7; strand=D; shift=1; score=0.420257; -yyycyccycCTCCyycyy ; cor=; Ncor= a 0 9.8 6.8 5.4 12.2 8.2 5.4 11.2 9.6 4.4 2.2 8 3.4 7 5.6 12.6 5 9.8 5.6 c 0 52.4 55.8 54.2 56.8 27.2 67.2 64.6 58.4 67 70.4 1.2 83 86 58.4 49.8 64.4 50 35 g 0 4.2 6.6 2.2 9.8 18.2 12.4 3.2 4.6 8 2.6 8.6 11.8 1.2 6.4 11.2 11.2 6 8.8 t 0 33.6 30.8 38.2 21.2 46.4 15 21 27.4 20.6 24.8 82.2 1.8 5.8 29.6 26.4 19.4 34.2 50.6

M00142_2.00_shift7 (ZNF691)
; positions_7nt_m3 versus M00142_2.00 (ZNF691); m=145/154; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score=0.418321; -------GTrCTCmy---- ; cor=; Ncor= a 0 0 0 0 0 0 0 4.12103 1.98931 34.2822 1.89551 0.0094304 0.0094304 26.7434 10.01 0 0 0 0 c 0 0 0 0 0 0 0 1.3828 0.00989707 0.961538 97.1426 1.89551 98.0856 52.3129 28.3311 0 0 0 0 g 0 0 0 0 0 0 0 89.006 18.8143 64.7468 0.0094304 0.952471 0.0094304 12.7964 10.01 0 0 0 0 t 0 0 0 0 0 0 0 5.49014 79.1865 0 0.952471 97.1426 1.89551 8.14737 51.6489 0 0 0 0

M09163_2.00_rc_shift7 (NKX2-4,NKX2-5,NKX2-6_rc)
; positions_7nt_m3 versus M09163_2.00_rc (NKX2-4,NKX2-5,NKX2-6_rc); m=146/154; ncol2=8; w=-1; offset=-1; strand=R; shift=7; score=0.414593; -------sCwCTymm---- ; cor=; Ncor= a 0 0 0 0 0 0 0 4.40882 3.00601 37.6754 0 0.400802 2.40481 27.2545 41.8838 0 0 0 0 c 0 0 0 0 0 0 0 48.497 76.9539 1.80361 95.992 0 51.9038 53.7074 31.0621 0 0 0 0 g 0 0 0 0 0 0 0 30.2605 0.200401 6.01202 0.400802 1.60321 3.40681 11.4228 16.4329 0 0 0 0 t 0 0 0 0 0 0 0 16.8337 19.8397 54.509 3.60721 97.996 42.2846 7.61523 10.6212 0 0 0 0

M07709_2.00_shift6 (ZKSCAN5)
; positions_7nt_m3 versus M07709_2.00 (ZKSCAN5); m=147/154; ncol2=9; w=-2; offset=-2; strand=D; shift=6; score=0.411117; ------TCACCTCCy---- ; cor=; Ncor= a 0 0 0 0 0 0 0.0739645 0.0739645 87.0562 6.28698 0.0739645 0.0739645 0.0739645 3.3284 13.9792 0 0 0 0 c 0 0 0 0 0 0 0.0739645 98.003 0.0739645 93.5651 90.6065 0.0739645 99.7781 88.2396 32.9142 0 0 0 0 g 0 0 0 0 0 0 0.0739645 0.0739645 5.99112 0.0739645 0.0739645 0.0739645 0.0739645 0.0739645 12.796 0 0 0 0 t 0 0 0 0 0 0 99.7781 1.84911 6.8787 0.0739645 9.24556 99.7781 0.0739645 8.35799 40.3107 0 0 0 0

M08298_2.00_shift5 (KLF7)
; positions_7nt_m3 versus M08298_2.00 (KLF7); m=148/154; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.409938; -----ggCcmCGCCCm--- ; cor=; Ncor= a 0 0 0 0 0 20.9622 15.4639 9.2784 19.9313 32.3024 0 19.244 0 0 0 29.2096 0 0 0 c 0 0 0 0 0 20.2749 17.5258 88.6598 61.512 67.6976 100 0 100 100 100 37.1134 0 0 0 g 0 0 0 0 0 46.7354 57.0447 0 0 0 0 80.756 0 0 0 9.622 0 0 0 t 0 0 0 0 0 12.0275 9.9656 2.0619 18.5567 0 0 0 0 0 0 24.055 0 0 0

M08857_2.00_shift0 (KLF6)
; positions_7nt_m3 versus M08857_2.00 (KLF6); m=149/154; ncol2=19; w=-8; offset=-8; strand=D; shift=0; score=0.409664; yyccmdgCCMCdCCCyycc ; cor=; Ncor= a 5.24194 10.6855 6.45161 11.6935 25.8065 25 10.8871 4.6371 4.23387 26.0081 2.21774 28.2258 1.20968 2.01613 13.1048 15.3226 8.46774 5.04032 14.9194 c 45.5645 43.3468 60.2823 60.8871 52.2177 13.7097 20.7661 83.6694 68.3468 68.9516 85.4839 0 89.1129 95.5645 81.4516 36.8952 28.0242 47.9839 51.0081 g 23.3871 11.0887 17.1371 12.7016 15.7258 31.8548 45.3629 3.02419 6.45161 2.21774 0.604839 45.7661 5.24194 0 0.604839 1.81452 18.9516 24.7984 18.5484 t 25.8065 34.879 16.129 14.7177 6.25 29.4355 22.9839 8.66935 20.9677 2.82258 11.6935 26.0081 4.43548 2.41935 4.83871 45.9677 44.5565 22.1774 15.5242

M08962_2.00_shift0 (M08962_2.00)
; positions_7nt_m3 versus M08962_2.00; m=150/154; ncol2=19; w=-8; offset=-8; strand=D; shift=0; score=0.409664; yyccmdgCCMCdCCCyycc ; cor=; Ncor= a 5.24194 10.6855 6.45161 11.6935 25.8065 25 10.8871 4.6371 4.23387 26.0081 2.21774 28.2258 1.20968 2.01613 13.1048 15.3226 8.46774 5.04032 14.9194 c 45.5645 43.3468 60.2823 60.8871 52.2177 13.7097 20.7661 83.6694 68.3468 68.9516 85.4839 0 89.1129 95.5645 81.4516 36.8952 28.0242 47.9839 51.0081 g 23.3871 11.0887 17.1371 12.7016 15.7258 31.8548 45.3629 3.02419 6.45161 2.21774 0.604839 45.7661 5.24194 0 0.604839 1.81452 18.9516 24.7984 18.5484 t 25.8065 34.879 16.129 14.7177 6.25 29.4355 22.9839 8.66935 20.9677 2.82258 11.6935 26.0081 4.43548 2.41935 4.83871 45.9677 44.5565 22.1774 15.5242

M08021_2.00_shift5 (M08021_2.00)
; positions_7nt_m3 versus M08021_2.00; m=151/154; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.405495; -----rrCCmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 27.5748 27.2425 4.6512 3.6545 45.515 0 52.4917 0 0 0 39.5349 0 0 0 c 0 0 0 0 0 21.2625 6.9767 87.3754 86.7109 49.5017 100 0 100 100 98.6711 19.6013 0 0 0 g 0 0 0 0 0 39.5349 56.1462 2.3256 0 0.996699 0 36.8771 0 0 0 2.6578 0 0 0 t 0 0 0 0 0 11.6279 9.6346 5.6478 9.63459 3.9867 0 10.6312 0 0 1.3289 38.206 0 0 0

M04456_2.00_shift5 (KLF2)
; positions_7nt_m3 versus M04456_2.00 (KLF2); m=152/154; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.404719; -----srCCmCrCCCm--- ; cor=; Ncor= a 0 0 0 0 0 21.2044 38.0149 6.81334 0.934809 48.188 0 37.9653 0 1.70501 0 31.1281 0 0 0 c 0 0 0 0 0 34.4925 19.6371 83.6764 87.0111 42.1117 100 1.9024 99.2424 95.724 90.5994 30.393 0 0 0 g 0 0 0 0 0 26.4348 37.46 6.52945 10.9717 6.82561 0 59.5533 0.701459 2.24628 3.61168 17.7269 0 0 0 t 0 0 0 0 0 17.8682 4.88794 2.98084 1.08241 2.87466 0 0.578991 0.0561167 0.324763 5.78893 20.752 0 0 0

M07707_2.00_shift11 (ZNF846)
; positions_7nt_m3 versus M07707_2.00 (ZNF846); m=153/154; ncol2=6; w=0; offset=3; strand=D; shift=11; score=0.403504; -----------TCCCGs-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 100 100 100 0 50 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 50 0 0 t 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0

M04464_2.00_shift5 (KLF4)
; positions_7nt_m3 versus M04464_2.00 (KLF4); m=154/154; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.400747; -----crCCmCrCCCa--- ; cor=; Ncor= a 0 0 0 0 0 16.7449 31.7536 4.96811 6.89314 53.6107 0 33.5846 0 1.09954 0 38.0943 0 0 0 c 0 0 0 0 0 43.525 22.8541 85.8006 84.3008 38.4297 96.0541 0 99.7269 98.6111 96.1806 22.9896 0 0 0 g 0 0 0 0 0 18.0164 35.545 3.12185 4.86478 4.50207 0.244269 61.163 0 0.270062 0.865475 15.0068 0 0 0 t 0 0 0 0 0 21.7136 9.84729 6.10943 3.94129 3.45759 3.70162 5.25245 0.273117 0.0192901 2.9539 23.9092 0 0 0