One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/positions_7nt_m4/peak-motifs_positions_7nt_m4.tf -format2 tf -file2 $RSAT/public_html/motif_databases/cisBP2/cisBP_Homo_sapiens_2019.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/positions_7nt_m4/peak-motifs_positions_7nt_m4_vs_db_cisBP_Homo_sapiens

One-to-n matrix alignment; reference matrix: positions_7nt_m4_shift2 ; 26 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
positions_7nt_m4_shift2 (positions_7nt_m4)
; positions_7nt_m4; m=0 (reference); ncol1=12; shift=2; ncol=14; --sgGGTGCACCcs ; Alignment reference a 0 0 922 1241 118 104 282 59 136 4261 72 259 992 993 c 0 0 1770 1137 165 470 289 183 4930 476 4662 4766 1938 1623 g 0 0 1623 1938 4766 4662 476 4930 183 289 470 165 1137 1770 t 0 0 993 992 259 72 4261 136 59 282 104 118 1241 922

M04386_2.00_shift4 (ZNF263)
; positions_7nt_m4 versus M04386_2.00 (ZNF263); m=1/25; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.601191; ----vGTsCTCCCy ; cor=; Ncor= a 0 0 0 0 29.7705 4.34783 0 3.37328 3.93013 2.36613 0 0.455433 10.6842 14.6885 c 0 0 0 0 36.7869 7.37986 2.98982 27.2526 95.1341 2.67746 96.764 99.2193 80.2632 32.6557 g 0 0 0 0 25.9016 87.2426 0 67.6875 0 0 0 0.325309 2.78947 20.9836 t 0 0 0 0 7.54098 1.02975 97.0102 1.68664 0.935745 94.9564 3.23604 0 6.26316 31.6721

M04387_2.00_rc_shift2 (ZNF263_rc)
; positions_7nt_m4 versus M04387_2.00_rc (ZNF263_rc); m=2/25; ncol2=10; w=0; offset=0; strand=R; shift=2; score=0.600109; --rGGGAGsACs-- ; cor=; Ncor= a 0 0 31.8725 8.33674 1.97198 0 92.5711 2.11752 1.07362 94.2091 1.97505 7.11845 0 0 c 0 0 13.0336 2.86065 2.02387 2.31916 0 2.17046 67.3696 0 91.3202 25.8542 0 0 g 0 0 34.5475 71.8022 91.178 97.0182 5.79557 93.0122 28.9494 5.79088 3.69023 45.1025 0 0 t 0 0 20.5464 17.0004 4.82615 0.662617 1.6333 2.69984 2.60736 0 3.01455 21.9248 0 0

M07771_2.00_shift0 (ZNF674)
; positions_7nt_m4 versus M07771_2.00 (ZNF674); m=3/25; ncol2=12; w=-2; offset=-2; strand=D; shift=0; score=0.563004; yybTGGyGCyCC-- ; cor=; Ncor= a 12.199 5.87798 2.36354 0.110765 13.5452 0.110765 0.554338 0.110765 13.8641 5.53264 0.554338 0.110765 0 0 c 35.2387 29.5329 35.6007 24.7289 0.110765 0.110765 34.2515 0.110765 68.6299 37.9346 97.4519 99.6677 0 0 g 22.7491 10.3032 31.247 0.110765 82.2454 86.8 15.4207 98.3184 12.9648 0.110765 0.110765 0.110765 0 0 t 29.8132 54.286 30.7888 75.0495 4.09859 12.9784 49.7735 1.46003 4.54126 56.4219 1.88301 0.110765 0 0

M07732_2.00_shift3 (ZNF790)
; positions_7nt_m4 versus M07732_2.00 (ZNF790); m=4/25; ncol2=8; w=0; offset=1; strand=D; shift=3; score=0.551032; ---TGCTGCAC--- ; cor=; Ncor= a 0 0 0 0 2.7027 0 0 0 0 91.8919 0 0 0 0 c 0 0 0 2.7027 0 81.0811 0 0 100 0 100 0 0 0 g 0 0 0 16.2162 97.2973 18.9189 0 100 0 8.1081 0 0 0 0 t 0 0 0 81.0811 0 0 100 0 0 0 0 0 0 0

M00336_2.00_rc_shift3 (PAX6_rc)
; positions_7nt_m4 versus M00336_2.00_rc (PAX6_rc); m=5/25; ncol2=8; w=0; offset=1; strand=R; shift=3; score=0.541251; ---GTGTGCAY--- ; cor=; Ncor= a 0 0 0 22.2345 6.71543 0.0664894 0.0664894 0.0664894 0.0664894 99.8005 0.0766871 0 0 0 c 0 0 0 0.110619 0.0664894 0.0664894 6.71543 0.0664894 99.8005 0.0664894 69.0951 0 0 0 g 0 0 0 77.5442 13.3644 99.8005 0.0664894 99.8005 0.0664894 0.0664894 0.0766871 0 0 0 t 0 0 0 0.110619 79.8537 0.0664894 93.1516 0.0664894 0.0664894 0.0664894 30.7515 0 0 0

M00766_2.00_rc_shift3 (M00766_2.00_rc)
; positions_7nt_m4 versus M00766_2.00_rc; m=6/25; ncol2=8; w=0; offset=1; strand=R; shift=3; score=0.495915; ---gGGAGsAC--- ; cor=; Ncor= a 0 0 0 15 3.84615 3.57143 89.2857 3.57143 3.57143 89.2857 4.54545 0 0 0 c 0 0 0 15 3.84615 3.57143 3.57143 3.57143 53.5714 3.57143 81.8182 0 0 0 g 0 0 0 60 80.7692 89.2857 3.57143 71.4286 39.2857 3.57143 9.09091 0 0 0 t 0 0 0 10 11.5385 3.57143 3.57143 21.4286 3.57143 3.57143 4.54545 0 0 0

M00142_2.00_rc_shift3 (ZNF691_rc)
; positions_7nt_m4 versus M00142_2.00_rc (ZNF691_rc); m=7/25; ncol2=8; w=0; offset=1; strand=R; shift=3; score=0.479875; ---rkGAGyAC--- ; cor=; Ncor= a 0 0 0 51.6489 8.14737 1.89551 97.1426 0.952471 0 79.1865 5.49014 0 0 0 c 0 0 0 10.01 12.7964 0.0094304 0.952471 0.0094304 64.7468 18.8143 89.006 0 0 0 g 0 0 0 28.3311 52.3129 98.0856 1.89551 97.1426 0.961538 0.00989707 1.3828 0 0 0 t 0 0 0 10.01 26.7434 0.0094304 0.0094304 1.89551 34.2822 1.98931 4.12103 0 0 0

M04392_2.00_rc_shift0 (SNAI2_rc)
; positions_7nt_m4 versus M04392_2.00_rc (SNAI2_rc); m=8/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.475413; rrCAGGTGCA---- ; cor=; Ncor= a 42.7063 62.5998 0 100 0 0.190442 0.023777 0 0 68.0061 0 0 0 0 c 8.96947 0 100 0 0 0 0.0772752 0 79.4015 3.94167 0 0 0 0 g 35.8361 32.3761 0 0 100 99.7917 0.225881 100 0 23.9186 0 0 0 0 t 12.4881 5.02407 0 0 0 0.017854 99.6731 0 20.5985 4.13355 0 0 0 0

M08775_2.00_shift6 (M08775_2.00)
; positions_7nt_m4 versus M08775_2.00; m=9/25; ncol2=9; w=0; offset=4; strand=D; shift=6; score=0.47529; ------yrCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 19.9921 31.573 0 99.884 0 0 0 0 c 0 0 0 0 0 0 34.674 0 100 0.11602 100 100 0 0 g 0 0 0 0 0 0 8.0382 65.935 0 0 0 0 0 100 t 0 0 0 0 0 0 37.2957 2.49199 0 0 0 0 100 0

M04443_2.00_rc_shift0 (SNAI1_rc)
; positions_7nt_m4 versus M04443_2.00_rc (SNAI1_rc); m=10/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.47274; arCAGGTGcA---- ; cor=; Ncor= a 47.7129 45.2762 1.84936 97.7416 1.39111 0.0937427 0.526617 0.98711 2.46875 68.6642 0 0 0 0 c 13.0307 0.617352 95.5615 0 0.866591 0 0 0 66.6094 6.36336 0 0 0 0 g 24.1379 48.7267 1.73728 1.45592 97.2178 99.9063 1.86606 99.0129 8.21094 16.7752 0 0 0 0 t 15.1185 5.37978 0.851827 0.802476 0.524515 0 97.6073 0 22.7109 8.19721 0 0 0 0

M04394_2.00_rc_shift0 (SNAI2_rc)
; positions_7nt_m4 versus M04394_2.00_rc (SNAI2_rc); m=11/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.46398; rrCAGGTGCa---- ; cor=; Ncor= a 41.7209 61.9346 0 99.9118 1.92227 0 0 0.413835 2.72069 60.9233 0 0 0 0 c 10.748 0.435455 100 0.0579491 0 0.0126072 0 0.0376213 68.1978 7.1332 0 0 0 0 g 34.9952 32.4259 0 0 97.9789 99.9874 0.0378119 99.4583 8.03481 24.5091 0 0 0 0 t 12.5359 5.20405 0 0.0302343 0.0988313 0 99.9622 0.0902912 21.0467 7.43432 0 0 0 0

M04607_2.00_shift6 (SNAI3)
; positions_7nt_m4 versus M04607_2.00 (SNAI3); m=12/25; ncol2=10; w=0; offset=4; strand=D; shift=6; score= 0.4531; ------trCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 7.38318 27.3869 0.47081 99.3639 0 0.667909 0.0477327 0.555027 c 0 0 0 0 0 0 20.9479 14.7375 98.054 0.445293 99.7127 97.0488 0.540971 0 g 0 0 0 0 0 0 9.18558 54.1327 0 0.19084 0.287265 0.45045 0 99.0802 t 0 0 0 0 0 0 62.4833 3.74285 1.4752 0 0 1.83287 99.4113 0.364732

M08973_2.00_shift5 (M08973_2.00)
; positions_7nt_m4 versus M08973_2.00; m=13/25; ncol2=11; w=0; offset=3; strand=D; shift=5; score=0.452543; -----mtgCACCTG ; cor=; Ncor= a 0 0 0 0 0 36.4372 19.6356 21.4575 0.404858 99.7976 0 0 0 0.202429 c 0 0 0 0 0 30.5668 20.8502 15.3846 99.5951 0 99.7976 99.7976 0 0 g 0 0 0 0 0 21.6599 23.8866 60.5263 0 0 0 0 0 99.7976 t 0 0 0 0 0 11.336 35.6275 2.63158 0 0.202429 0.202429 0.202429 100 0

M04393_2.00_rc_shift0 (SNAI2_rc)
; positions_7nt_m4 versus M04393_2.00_rc (SNAI2_rc); m=14/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.452461; rrCAGGTGcr---- ; cor=; Ncor= a 37.8363 53.9334 0 100 1.10288 0 0 0 2.69082 48.6089 0 0 0 0 c 13.0222 0.117782 100 0 0 0 0 0 65.6645 9.09527 0 0 0 0 g 32.4109 38.912 0 0 98.8971 100 0.0501283 100 7.14839 32.754 0 0 0 0 t 16.7306 7.03681 0 0 0 0 99.9499 0 24.4963 9.54176 0 0 0 0

M02728_2.00_rc_shift2 (TCF4_rc)
; positions_7nt_m4 versus M02728_2.00_rc (TCF4_rc); m=15/25; ncol2=7; w=0; offset=0; strand=R; shift=2; score=0.447703; --CAGGTGy----- ; cor=; Ncor= a 0 0 0.647821 98.3422 0.0574053 2.40128 0.2936 0.298507 2.85714 0 0 0 0 0 c 0 0 97.821 0.236827 3.90356 8.96478 0.998238 0 47.9365 0 0 0 0 0 g 0 0 0.294464 0.769686 95.3502 88.6339 1.1744 99.1642 9.66811 0 0 0 0 0 t 0 0 1.23675 0.651273 0.688863 0 97.5338 0.537313 39.5382 0 0 0 0 0

M04444_2.00_shift6 (SNAI1)
; positions_7nt_m4 versus M04444_2.00 (SNAI1); m=16/25; ncol2=10; w=0; offset=4; strand=D; shift=6; score=0.446918; ------yGCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 5.98876 19.479 0.134373 100 0 0.0322103 0.0460193 0.00657505 c 0 0 0 0 0 0 46.6276 9.42949 99.6592 0 100 97.945 0 0.0263002 g 0 0 0 0 0 0 4.56805 69.3091 0 0 0 0.0805257 0 99.9671 t 0 0 0 0 0 0 42.8155 1.78242 0.206476 0 0 1.94228 99.954 0

M04608_2.00_rc_shift0 (SNAI3_rc)
; positions_7nt_m4 versus M04608_2.00_rc (SNAI3_rc); m=17/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.444579; rrCAGGTGyr---- ; cor=; Ncor= a 43.1493 55.3369 0.806723 99.8979 2.20903 0.102145 0.168124 1.9385 2.8208 54.0541 0 0 0 0 c 12.0654 0.333556 98.6218 0 1.05506 0 0 0 54.0929 5.86092 0 0 0 0 g 28.8344 42.5284 0.571429 0 96.7359 99.8979 1.17687 98.0615 17.1091 35.044 0 0 0 0 t 15.9509 1.8012 0 0.102145 0 0 98.655 0 25.9771 5.041 0 0 0 0

M04442_2.00_shift6 (SNAI1)
; positions_7nt_m4 versus M04442_2.00 (SNAI1); m=18/25; ncol2=10; w=0; offset=4; strand=D; shift=6; score=0.438068; ------yrCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 13.8336 26.2356 0 100 0 0 0 0 c 0 0 0 0 0 0 35.0855 11.9189 100 0 100 99.5913 0 0 g 0 0 0 0 0 0 13.6551 59.4683 0 0 0 0 0 100 t 0 0 0 0 0 0 37.4258 2.37716 0 0 0 0.408703 100 0

M08853_2.00_rc_shift0 (SNAI2_rc)
; positions_7nt_m4 versus M08853_2.00_rc (SNAI2_rc); m=19/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.437035; rrCAGGTGca---- ; cor=; Ncor= a 40 43 0.2 100 0 0 0 0 0.4 37.4 0 0 0 0 c 7.2 0.4 99.8 0 0 0 0 0 56.2 23.2 0 0 0 0 g 42.6 56.4 0 0 100 100 0 99.4 21 18.8 0 0 0 0 t 10.2 0.2 0 0 0 0 100 0.6 22.4 20.6 0 0 0 0

M04395_2.00_rc_shift0 (SNAI2_rc)
; positions_7nt_m4 versus M04395_2.00_rc (SNAI2_rc); m=20/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.433513; rrCAGGTGcr---- ; cor=; Ncor= a 34.6441 46.5531 0 100 3.56037 0 0 0.512821 3.74194 37.6205 0 0 0 0 c 13.6662 0.264692 100 0 0 0 0 0 59.0645 7.87723 0 0 0 0 g 34.93 46.0207 0 0 96.3684 100 0 99.1464 13.0474 45.5218 0 0 0 0 t 16.7598 7.16155 0 0 0.0712074 0 100 0.340819 24.1461 8.98042 0 0 0 0

M10091_2.00_shift5 (ZEB1)
; positions_7nt_m4 versus M10091_2.00 (ZEB1); m=21/25; ncol2=12; w=0; offset=3; strand=D; shift=5; score=0.425348; -----vyrCACCTG ; cor=; Ncor= a 0 0 0 0 0 25 8.33333 41.6667 0 100 0 0 0 0 c 0 0 0 0 0 41.6667 33.3333 0 100 0 91.6667 91.6667 0 0 g 0 0 0 0 0 33.3333 16.6667 58.3333 0 0 0 8.33333 0 100 t 0 0 0 0 0 0 41.6667 0 0 0 8.33333 0 100 0

M04441_2.00_rc_shift0 (SNAI1_rc)
; positions_7nt_m4 versus M04441_2.00_rc (SNAI1_rc); m=22/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.413973; drCAGGTGyr---- ; cor=; Ncor= a 26.3924 29.1363 2.11947 95.4341 7.8242 0.358441 0.189413 3.36206 6.08683 32.6156 0 0 0 0 c 15.9486 2.08741 94.9579 1.41847 2.29055 0.0248917 0 0 40.6209 14.8464 0 0 0 0 g 32.0773 54.1186 1.30685 0.434616 88.5295 99.4773 0.209351 95.1569 19.7051 31.9884 0 0 0 0 t 25.5817 14.6577 1.61574 2.71277 1.35572 0.139394 99.6012 1.48102 33.5871 20.5496 0 0 0 0

M02807_2.00_rc_shift0 (TCF4_rc)
; positions_7nt_m4 versus M02807_2.00_rc (TCF4_rc); m=23/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.404063; wvCAGGTGyr---- ; cor=; Ncor= a 26.4568 30.986 0.122597 99.4279 0 5.56204 0 0.0638695 2.01121 25.4979 0 0 0 0 c 23.7915 31.0991 99.7205 0 1.86255 9.65227 0 0 47.4036 10.4647 0 0 0 0 g 23.6636 36.0757 0.0245194 0 97.8679 84.7857 0 99.9067 12.1214 40.7376 0 0 0 0 t 26.088 1.83919 0.132405 0.572071 0.269516 0 100 0.0294782 38.4638 23.2997 0 0 0 0

M02808_2.00_rc_shift0 (TCF4_rc)
; positions_7nt_m4 versus M02808_2.00_rc (TCF4_rc); m=24/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.403261; wrcAGGTGyd---- ; cor=; Ncor= a 27.2727 31.5047 14.9671 91.7986 7.80488 7.16216 18.5185 0 8.6478 25.5887 0 0 0 0 c 22.5705 24.7649 52.4671 0 4.7561 6.62162 0.83632 5.83215 31.4465 12.7159 0 0 0 0 g 19.279 33.3856 24.2599 8.20144 77.8049 86.2162 4.42055 90.7539 19.1824 33.124 0 0 0 0 t 30.8777 10.3448 8.30592 0 9.63415 0 76.2246 3.41394 40.7233 28.5714 0 0 0 0

M02794_2.00_shift6 (MESP1)
; positions_7nt_m4 versus M02794_2.00 (MESP1); m=25/25; ncol2=10; w=0; offset=4; strand=D; shift=6; score=0.401311; ------hrCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 40.2098 47.0383 0 88.5802 0 2.40964 0 0 c 0 0 0 0 0 0 25.5245 19.1638 100 11.4198 86.4458 86.4458 11.1455 9.28144 g 0 0 0 0 0 0 4.8951 31.7073 0 0 9.33735 4.51807 0 85.9281 t 0 0 0 0 0 0 29.3706 2.09059 0 0 4.21687 6.62651 88.8545 4.79042

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
positions_7nt_m4_shift2 (positions_7nt_m4)				; positions_7nt_m4; m=0 (reference); ncol1=12; shift=2; ncol=14; --sgGGTGCACCcs ; Alignment reference a 0 0 922 1241 118 104 282 59 136 4261 72 259 992 993 c 0 0 1770 1137 165 470 289 183 4930 476 4662 4766 1938 1623 g 0 0 1623 1938 4766 4662 476 4930 183 289 470 165 1137 1770 t 0 0 993 992 259 72 4261 136 59 282 104 118 1241 922
M04386_2.00_shift4 (ZNF263)				; positions_7nt_m4 versus M04386_2.00 (ZNF263); m=1/25; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.601191; ----vGTsCTCCCy ; cor=; Ncor= a 0 0 0 0 29.7705 4.34783 0 3.37328 3.93013 2.36613 0 0.455433 10.6842 14.6885 c 0 0 0 0 36.7869 7.37986 2.98982 27.2526 95.1341 2.67746 96.764 99.2193 80.2632 32.6557 g 0 0 0 0 25.9016 87.2426 0 67.6875 0 0 0 0.325309 2.78947 20.9836 t 0 0 0 0 7.54098 1.02975 97.0102 1.68664 0.935745 94.9564 3.23604 0 6.26316 31.6721
M04387_2.00_rc_shift2 (ZNF263_rc)				; positions_7nt_m4 versus M04387_2.00_rc (ZNF263_rc); m=2/25; ncol2=10; w=0; offset=0; strand=R; shift=2; score=0.600109; --rGGGAGsACs-- ; cor=; Ncor= a 0 0 31.8725 8.33674 1.97198 0 92.5711 2.11752 1.07362 94.2091 1.97505 7.11845 0 0 c 0 0 13.0336 2.86065 2.02387 2.31916 0 2.17046 67.3696 0 91.3202 25.8542 0 0 g 0 0 34.5475 71.8022 91.178 97.0182 5.79557 93.0122 28.9494 5.79088 3.69023 45.1025 0 0 t 0 0 20.5464 17.0004 4.82615 0.662617 1.6333 2.69984 2.60736 0 3.01455 21.9248 0 0
M07771_2.00_shift0 (ZNF674)				; positions_7nt_m4 versus M07771_2.00 (ZNF674); m=3/25; ncol2=12; w=-2; offset=-2; strand=D; shift=0; score=0.563004; yybTGGyGCyCC-- ; cor=; Ncor= a 12.199 5.87798 2.36354 0.110765 13.5452 0.110765 0.554338 0.110765 13.8641 5.53264 0.554338 0.110765 0 0 c 35.2387 29.5329 35.6007 24.7289 0.110765 0.110765 34.2515 0.110765 68.6299 37.9346 97.4519 99.6677 0 0 g 22.7491 10.3032 31.247 0.110765 82.2454 86.8 15.4207 98.3184 12.9648 0.110765 0.110765 0.110765 0 0 t 29.8132 54.286 30.7888 75.0495 4.09859 12.9784 49.7735 1.46003 4.54126 56.4219 1.88301 0.110765 0 0
M07732_2.00_shift3 (ZNF790)				; positions_7nt_m4 versus M07732_2.00 (ZNF790); m=4/25; ncol2=8; w=0; offset=1; strand=D; shift=3; score=0.551032; ---TGCTGCAC--- ; cor=; Ncor= a 0 0 0 0 2.7027 0 0 0 0 91.8919 0 0 0 0 c 0 0 0 2.7027 0 81.0811 0 0 100 0 100 0 0 0 g 0 0 0 16.2162 97.2973 18.9189 0 100 0 8.1081 0 0 0 0 t 0 0 0 81.0811 0 0 100 0 0 0 0 0 0 0
M00336_2.00_rc_shift3 (PAX6_rc)				; positions_7nt_m4 versus M00336_2.00_rc (PAX6_rc); m=5/25; ncol2=8; w=0; offset=1; strand=R; shift=3; score=0.541251; ---GTGTGCAY--- ; cor=; Ncor= a 0 0 0 22.2345 6.71543 0.0664894 0.0664894 0.0664894 0.0664894 99.8005 0.0766871 0 0 0 c 0 0 0 0.110619 0.0664894 0.0664894 6.71543 0.0664894 99.8005 0.0664894 69.0951 0 0 0 g 0 0 0 77.5442 13.3644 99.8005 0.0664894 99.8005 0.0664894 0.0664894 0.0766871 0 0 0 t 0 0 0 0.110619 79.8537 0.0664894 93.1516 0.0664894 0.0664894 0.0664894 30.7515 0 0 0
M00766_2.00_rc_shift3 (M00766_2.00_rc)				; positions_7nt_m4 versus M00766_2.00_rc; m=6/25; ncol2=8; w=0; offset=1; strand=R; shift=3; score=0.495915; ---gGGAGsAC--- ; cor=; Ncor= a 0 0 0 15 3.84615 3.57143 89.2857 3.57143 3.57143 89.2857 4.54545 0 0 0 c 0 0 0 15 3.84615 3.57143 3.57143 3.57143 53.5714 3.57143 81.8182 0 0 0 g 0 0 0 60 80.7692 89.2857 3.57143 71.4286 39.2857 3.57143 9.09091 0 0 0 t 0 0 0 10 11.5385 3.57143 3.57143 21.4286 3.57143 3.57143 4.54545 0 0 0
M00142_2.00_rc_shift3 (ZNF691_rc)				; positions_7nt_m4 versus M00142_2.00_rc (ZNF691_rc); m=7/25; ncol2=8; w=0; offset=1; strand=R; shift=3; score=0.479875; ---rkGAGyAC--- ; cor=; Ncor= a 0 0 0 51.6489 8.14737 1.89551 97.1426 0.952471 0 79.1865 5.49014 0 0 0 c 0 0 0 10.01 12.7964 0.0094304 0.952471 0.0094304 64.7468 18.8143 89.006 0 0 0 g 0 0 0 28.3311 52.3129 98.0856 1.89551 97.1426 0.961538 0.00989707 1.3828 0 0 0 t 0 0 0 10.01 26.7434 0.0094304 0.0094304 1.89551 34.2822 1.98931 4.12103 0 0 0
M04392_2.00_rc_shift0 (SNAI2_rc)				; positions_7nt_m4 versus M04392_2.00_rc (SNAI2_rc); m=8/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.475413; rrCAGGTGCA---- ; cor=; Ncor= a 42.7063 62.5998 0 100 0 0.190442 0.023777 0 0 68.0061 0 0 0 0 c 8.96947 0 100 0 0 0 0.0772752 0 79.4015 3.94167 0 0 0 0 g 35.8361 32.3761 0 0 100 99.7917 0.225881 100 0 23.9186 0 0 0 0 t 12.4881 5.02407 0 0 0 0.017854 99.6731 0 20.5985 4.13355 0 0 0 0
M08775_2.00_shift6 (M08775_2.00)				; positions_7nt_m4 versus M08775_2.00; m=9/25; ncol2=9; w=0; offset=4; strand=D; shift=6; score=0.47529; ------yrCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 19.9921 31.573 0 99.884 0 0 0 0 c 0 0 0 0 0 0 34.674 0 100 0.11602 100 100 0 0 g 0 0 0 0 0 0 8.0382 65.935 0 0 0 0 0 100 t 0 0 0 0 0 0 37.2957 2.49199 0 0 0 0 100 0
M04443_2.00_rc_shift0 (SNAI1_rc)				; positions_7nt_m4 versus M04443_2.00_rc (SNAI1_rc); m=10/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.47274; arCAGGTGcA---- ; cor=; Ncor= a 47.7129 45.2762 1.84936 97.7416 1.39111 0.0937427 0.526617 0.98711 2.46875 68.6642 0 0 0 0 c 13.0307 0.617352 95.5615 0 0.866591 0 0 0 66.6094 6.36336 0 0 0 0 g 24.1379 48.7267 1.73728 1.45592 97.2178 99.9063 1.86606 99.0129 8.21094 16.7752 0 0 0 0 t 15.1185 5.37978 0.851827 0.802476 0.524515 0 97.6073 0 22.7109 8.19721 0 0 0 0
M04394_2.00_rc_shift0 (SNAI2_rc)				; positions_7nt_m4 versus M04394_2.00_rc (SNAI2_rc); m=11/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.46398; rrCAGGTGCa---- ; cor=; Ncor= a 41.7209 61.9346 0 99.9118 1.92227 0 0 0.413835 2.72069 60.9233 0 0 0 0 c 10.748 0.435455 100 0.0579491 0 0.0126072 0 0.0376213 68.1978 7.1332 0 0 0 0 g 34.9952 32.4259 0 0 97.9789 99.9874 0.0378119 99.4583 8.03481 24.5091 0 0 0 0 t 12.5359 5.20405 0 0.0302343 0.0988313 0 99.9622 0.0902912 21.0467 7.43432 0 0 0 0
M04607_2.00_shift6 (SNAI3)				; positions_7nt_m4 versus M04607_2.00 (SNAI3); m=12/25; ncol2=10; w=0; offset=4; strand=D; shift=6; score= 0.4531; ------trCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 7.38318 27.3869 0.47081 99.3639 0 0.667909 0.0477327 0.555027 c 0 0 0 0 0 0 20.9479 14.7375 98.054 0.445293 99.7127 97.0488 0.540971 0 g 0 0 0 0 0 0 9.18558 54.1327 0 0.19084 0.287265 0.45045 0 99.0802 t 0 0 0 0 0 0 62.4833 3.74285 1.4752 0 0 1.83287 99.4113 0.364732
M08973_2.00_shift5 (M08973_2.00)				; positions_7nt_m4 versus M08973_2.00; m=13/25; ncol2=11; w=0; offset=3; strand=D; shift=5; score=0.452543; -----mtgCACCTG ; cor=; Ncor= a 0 0 0 0 0 36.4372 19.6356 21.4575 0.404858 99.7976 0 0 0 0.202429 c 0 0 0 0 0 30.5668 20.8502 15.3846 99.5951 0 99.7976 99.7976 0 0 g 0 0 0 0 0 21.6599 23.8866 60.5263 0 0 0 0 0 99.7976 t 0 0 0 0 0 11.336 35.6275 2.63158 0 0.202429 0.202429 0.202429 100 0
M04393_2.00_rc_shift0 (SNAI2_rc)				; positions_7nt_m4 versus M04393_2.00_rc (SNAI2_rc); m=14/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.452461; rrCAGGTGcr---- ; cor=; Ncor= a 37.8363 53.9334 0 100 1.10288 0 0 0 2.69082 48.6089 0 0 0 0 c 13.0222 0.117782 100 0 0 0 0 0 65.6645 9.09527 0 0 0 0 g 32.4109 38.912 0 0 98.8971 100 0.0501283 100 7.14839 32.754 0 0 0 0 t 16.7306 7.03681 0 0 0 0 99.9499 0 24.4963 9.54176 0 0 0 0
M02728_2.00_rc_shift2 (TCF4_rc)				; positions_7nt_m4 versus M02728_2.00_rc (TCF4_rc); m=15/25; ncol2=7; w=0; offset=0; strand=R; shift=2; score=0.447703; --CAGGTGy----- ; cor=; Ncor= a 0 0 0.647821 98.3422 0.0574053 2.40128 0.2936 0.298507 2.85714 0 0 0 0 0 c 0 0 97.821 0.236827 3.90356 8.96478 0.998238 0 47.9365 0 0 0 0 0 g 0 0 0.294464 0.769686 95.3502 88.6339 1.1744 99.1642 9.66811 0 0 0 0 0 t 0 0 1.23675 0.651273 0.688863 0 97.5338 0.537313 39.5382 0 0 0 0 0
M04444_2.00_shift6 (SNAI1)				; positions_7nt_m4 versus M04444_2.00 (SNAI1); m=16/25; ncol2=10; w=0; offset=4; strand=D; shift=6; score=0.446918; ------yGCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 5.98876 19.479 0.134373 100 0 0.0322103 0.0460193 0.00657505 c 0 0 0 0 0 0 46.6276 9.42949 99.6592 0 100 97.945 0 0.0263002 g 0 0 0 0 0 0 4.56805 69.3091 0 0 0 0.0805257 0 99.9671 t 0 0 0 0 0 0 42.8155 1.78242 0.206476 0 0 1.94228 99.954 0
M04608_2.00_rc_shift0 (SNAI3_rc)				; positions_7nt_m4 versus M04608_2.00_rc (SNAI3_rc); m=17/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.444579; rrCAGGTGyr---- ; cor=; Ncor= a 43.1493 55.3369 0.806723 99.8979 2.20903 0.102145 0.168124 1.9385 2.8208 54.0541 0 0 0 0 c 12.0654 0.333556 98.6218 0 1.05506 0 0 0 54.0929 5.86092 0 0 0 0 g 28.8344 42.5284 0.571429 0 96.7359 99.8979 1.17687 98.0615 17.1091 35.044 0 0 0 0 t 15.9509 1.8012 0 0.102145 0 0 98.655 0 25.9771 5.041 0 0 0 0
M04442_2.00_shift6 (SNAI1)				; positions_7nt_m4 versus M04442_2.00 (SNAI1); m=18/25; ncol2=10; w=0; offset=4; strand=D; shift=6; score=0.438068; ------yrCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 13.8336 26.2356 0 100 0 0 0 0 c 0 0 0 0 0 0 35.0855 11.9189 100 0 100 99.5913 0 0 g 0 0 0 0 0 0 13.6551 59.4683 0 0 0 0 0 100 t 0 0 0 0 0 0 37.4258 2.37716 0 0 0 0.408703 100 0
M08853_2.00_rc_shift0 (SNAI2_rc)				; positions_7nt_m4 versus M08853_2.00_rc (SNAI2_rc); m=19/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.437035; rrCAGGTGca---- ; cor=; Ncor= a 40 43 0.2 100 0 0 0 0 0.4 37.4 0 0 0 0 c 7.2 0.4 99.8 0 0 0 0 0 56.2 23.2 0 0 0 0 g 42.6 56.4 0 0 100 100 0 99.4 21 18.8 0 0 0 0 t 10.2 0.2 0 0 0 0 100 0.6 22.4 20.6 0 0 0 0
M04395_2.00_rc_shift0 (SNAI2_rc)				; positions_7nt_m4 versus M04395_2.00_rc (SNAI2_rc); m=20/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.433513; rrCAGGTGcr---- ; cor=; Ncor= a 34.6441 46.5531 0 100 3.56037 0 0 0.512821 3.74194 37.6205 0 0 0 0 c 13.6662 0.264692 100 0 0 0 0 0 59.0645 7.87723 0 0 0 0 g 34.93 46.0207 0 0 96.3684 100 0 99.1464 13.0474 45.5218 0 0 0 0 t 16.7598 7.16155 0 0 0.0712074 0 100 0.340819 24.1461 8.98042 0 0 0 0
M10091_2.00_shift5 (ZEB1)				; positions_7nt_m4 versus M10091_2.00 (ZEB1); m=21/25; ncol2=12; w=0; offset=3; strand=D; shift=5; score=0.425348; -----vyrCACCTG ; cor=; Ncor= a 0 0 0 0 0 25 8.33333 41.6667 0 100 0 0 0 0 c 0 0 0 0 0 41.6667 33.3333 0 100 0 91.6667 91.6667 0 0 g 0 0 0 0 0 33.3333 16.6667 58.3333 0 0 0 8.33333 0 100 t 0 0 0 0 0 0 41.6667 0 0 0 8.33333 0 100 0
M04441_2.00_rc_shift0 (SNAI1_rc)				; positions_7nt_m4 versus M04441_2.00_rc (SNAI1_rc); m=22/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.413973; drCAGGTGyr---- ; cor=; Ncor= a 26.3924 29.1363 2.11947 95.4341 7.8242 0.358441 0.189413 3.36206 6.08683 32.6156 0 0 0 0 c 15.9486 2.08741 94.9579 1.41847 2.29055 0.0248917 0 0 40.6209 14.8464 0 0 0 0 g 32.0773 54.1186 1.30685 0.434616 88.5295 99.4773 0.209351 95.1569 19.7051 31.9884 0 0 0 0 t 25.5817 14.6577 1.61574 2.71277 1.35572 0.139394 99.6012 1.48102 33.5871 20.5496 0 0 0 0
M02807_2.00_rc_shift0 (TCF4_rc)				; positions_7nt_m4 versus M02807_2.00_rc (TCF4_rc); m=23/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.404063; wvCAGGTGyr---- ; cor=; Ncor= a 26.4568 30.986 0.122597 99.4279 0 5.56204 0 0.0638695 2.01121 25.4979 0 0 0 0 c 23.7915 31.0991 99.7205 0 1.86255 9.65227 0 0 47.4036 10.4647 0 0 0 0 g 23.6636 36.0757 0.0245194 0 97.8679 84.7857 0 99.9067 12.1214 40.7376 0 0 0 0 t 26.088 1.83919 0.132405 0.572071 0.269516 0 100 0.0294782 38.4638 23.2997 0 0 0 0
M02808_2.00_rc_shift0 (TCF4_rc)				; positions_7nt_m4 versus M02808_2.00_rc (TCF4_rc); m=24/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.403261; wrcAGGTGyd---- ; cor=; Ncor= a 27.2727 31.5047 14.9671 91.7986 7.80488 7.16216 18.5185 0 8.6478 25.5887 0 0 0 0 c 22.5705 24.7649 52.4671 0 4.7561 6.62162 0.83632 5.83215 31.4465 12.7159 0 0 0 0 g 19.279 33.3856 24.2599 8.20144 77.8049 86.2162 4.42055 90.7539 19.1824 33.124 0 0 0 0 t 30.8777 10.3448 8.30592 0 9.63415 0 76.2246 3.41394 40.7233 28.5714 0 0 0 0
M02794_2.00_shift6 (MESP1)				; positions_7nt_m4 versus M02794_2.00 (MESP1); m=25/25; ncol2=10; w=0; offset=4; strand=D; shift=6; score=0.401311; ------hrCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 40.2098 47.0383 0 88.5802 0 2.40964 0 0 c 0 0 0 0 0 0 25.5245 19.1638 100 11.4198 86.4458 86.4458 11.1455 9.28144 g 0 0 0 0 0 0 4.8951 31.7073 0 0 9.33735 4.51807 0 85.9281 t 0 0 0 0 0 0 29.3706 2.09059 0 0 4.21687 6.62651 88.8545 4.79042