One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_motifs/peak-motifs_motifs_discovered.tf -format2 tf -file2 $RSAT/public_html/motif_databases/cisBP2/cisBP_Homo_sapiens_2019.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2026/01/04/peak-motifs.2026-01-04.215525_2026-01-04.215525_0oPAHx/results/discovered_vs_db/peak-motifs_motifs_vs_db_cisBP_Homo_sapiens.tab

One-to-n matrix alignment; reference matrix: positions_6nt_m5_shift9 ; 245 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
positions_6nt_m5_shift9 (positions_6nt_m5)
; positions_6nt_m5; m=0 (reference); ncol1=10; shift=9; ncol=19; ---------baCAGATGyk ; Alignment reference a 0 0 0 0 0 0 0 0 0 1918 2705 52 8511 37 8770 0 437 1672 1903 c 0 0 0 0 0 0 0 0 0 2260 2180 8300 103 792 2 353 97 2322 2061 g 0 0 0 0 0 0 0 0 0 2398 2121 111 146 7173 14 0 8183 1999 2484 t 0 0 0 0 0 0 0 0 0 2216 1786 329 32 790 6 8439 75 2799 2344

M08764_2.00_shift9 (NEUROD4,NEUROD6)
; positions_6nt_m5 versus M08764_2.00 (NEUROD4,NEUROD6); m=1/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.897798; ---------rrCAGATGGy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 43.4 52.4 2.2 99.8 0.2 73 0.8 0.2 0.8 7.6 c 0 0 0 0 0 0 0 0 0 7.2 20.8 97.6 0 0 22 0 0 4.8 39.6 g 0 0 0 0 0 0 0 0 0 47 26.6 0.2 0 97.4 5 0 99.2 76.8 12.6 t 0 0 0 0 0 0 0 0 0 2.4 0.2 0 0.2 2.4 0 99.2 0.6 17.6 40.2

M08735_2.00_shift9 (NEUROD1,NEUROD4,NEUROD6)
; positions_6nt_m5 versus M08735_2.00 (NEUROD1,NEUROD4,NEUROD6); m=2/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.897798; ---------rrCAGATGGy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 43.4 52.4 2.2 99.8 0.2 73 0.8 0.2 0.8 7.6 c 0 0 0 0 0 0 0 0 0 7.2 20.8 97.6 0 0 22 0 0 4.8 39.6 g 0 0 0 0 0 0 0 0 0 47 26.6 0.2 0 97.4 5 0 99.2 76.8 12.6 t 0 0 0 0 0 0 0 0 0 2.4 0.2 0 0.2 2.4 0 99.2 0.6 17.6 40.2

M08770_2.00_shift9 (NEUROD4,NEUROD6)
; positions_6nt_m5 versus M08770_2.00 (NEUROD4,NEUROD6); m=3/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.895145; ---------rrCAGATGGy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 49 42.2 0.2 100 0.2 75 10.4 0.2 0.4 10 c 0 0 0 0 0 0 0 0 0 8.2 19.4 99.8 0 0.6 22.4 0.2 0 17.4 39.2 g 0 0 0 0 0 0 0 0 0 36.4 38 0 0 92.8 2.4 0.6 95.8 78.8 16.2 t 0 0 0 0 0 0 0 0 0 6.4 0.4 0 0 6.4 0.2 88.8 4 3.4 34.6

M05955_2.00_shift9 (TWIST2)
; positions_6nt_m5 versus M05955_2.00 (TWIST2); m=4/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.893612; ---------rCCAGATGTb ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 52.1739 4.34783 0 100 0 95.6522 0 0 0 0 c 0 0 0 0 0 0 0 0 0 17.3913 82.6087 95.6522 0 13.0435 0 0 4.34783 8.69565 31.8182 g 0 0 0 0 0 0 0 0 0 30.4348 8.69565 0 0 69.5652 4.34783 0 95.6522 17.3913 31.8182 t 0 0 0 0 0 0 0 0 0 0 4.34783 4.34783 0 17.3913 0 100 0 73.913 36.3636

M09474_2.00_shift9 (NEUROD4,NEUROD6)
; positions_6nt_m5 versus M09474_2.00 (NEUROD4,NEUROD6); m=5/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.882404; ---------rrCAGATGGy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 54.8 50.8 0.1 99 0.5 72.7 1 0.4 1.7 6.8 c 0 0 0 0 0 0 0 0 0 4.6 22.2 99 0.4 0.8 22.1 0.9 0.4 3.4 51.1 g 0 0 0 0 0 0 0 0 0 35.6 26.5 0.2 0.3 95.2 4.2 0.4 97.7 82.1 10 t 0 0 0 0 0 0 0 0 0 5 0.5 0.7 0.3 3.5 1 97.7 1.5 12.8 32.1

M09477_2.00_shift9 (M09477_2.00)
; positions_6nt_m5 versus M09477_2.00; m=6/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.849515; ---------rmCAkmTGgy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 49 51 0.1 95.9 4.8 63 15.1 0.1 1.8 20.6 c 0 0 0 0 0 0 0 0 0 8.6 28.3 97.5 1.4 5 36.2 9.4 0.2 15.9 32.5 g 0 0 0 0 0 0 0 0 0 29.1 18.5 0.1 1.8 51.3 0.7 0.1 78.2 64.4 9.7 t 0 0 0 0 0 0 0 0 0 13.2 2.2 2.3 0.9 38.9 0.1 75.4 21.5 17.9 37.1

M05987_2.00_rc_shift9 (M05987_2.00_rc)
; positions_6nt_m5 versus M05987_2.00_rc; m=7/244; ncol2=9; w=0; offset=0; strand=R; shift=9; score=0.834882; ---------RmCAGATGk- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 31.25 56.25 0 100 0 93.75 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 37.5 100 0 0 0 0 0 6.25 0 g 0 0 0 0 0 0 0 0 0 68.75 6.25 0 0 81.25 6.25 0 100 31.25 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 18.75 0 100 0 62.5 0

M04066_2.00_shift9 (TFAP4)
; positions_6nt_m5 versus M04066_2.00 (TFAP4); m=8/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.833428; ---------ahCAkaTGdt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 60.2906 35.9438 0 100 0 60.5103 0 0 27.3642 9.28412 c 0 0 0 0 0 0 0 0 0 15.0121 30.5221 98.8095 0 12.4845 21.3852 7.77778 2.35294 7.84708 20.5817 g 0 0 0 0 0 0 0 0 0 12.954 8.03213 1.19048 0 25.958 18.1045 0 97.6471 32.7968 14.4295 t 0 0 0 0 0 0 0 0 0 11.7433 25.502 0 0 61.5575 0 92.2222 0 31.992 55.7047

M04072_2.00_rc_shift9 (TFAP4_rc)
; positions_6nt_m5 versus M04072_2.00_rc (TFAP4_rc); m=9/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.828976; ---------ahCAyaTGdt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 53.3847 37.8812 0 91.7526 1.03093 56.947 1.88088 0 27.1268 10.383 c 0 0 0 0 0 0 0 0 0 14.653 28.5714 100 0 25.3436 17.8245 0.470219 0.479233 2.56822 20.5106 g 0 0 0 0 0 0 0 0 0 21.7652 7.0626 0 7.51105 20.1031 24.6801 0 99.5208 33.8684 16.0851 t 0 0 0 0 0 0 0 0 0 10.1971 26.4848 0 0.736377 53.5223 0.548446 97.6489 0 36.4366 53.0213

M09840_2.00_rc_shift9 (MYOD1_rc)
; positions_6nt_m5 versus M09840_2.00_rc (MYOD1_rc); m=10/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.828724; ---------rrCAGgTGsw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 35.7143 42.8571 0 100 7.14286 21.4286 0 0 7.14286 28.5714 c 0 0 0 0 0 0 0 0 0 0 14.2857 100 0 7.14286 21.4286 0 0 35.7143 21.4286 g 0 0 0 0 0 0 0 0 0 64.2857 28.5714 0 0 85.7143 50 0 100 35.7143 14.2857 t 0 0 0 0 0 0 0 0 0 0 14.2857 0 0 0 7.14286 100 0 21.4286 35.7143

M04068_2.00_rc_shift9 (TFAP4_rc)
; positions_6nt_m5 versus M04068_2.00_rc (TFAP4_rc); m=11/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.827785; ---------awCAtaTGwt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 54.8536 34.3633 0 92.3476 1.42307 63.2327 0.0887705 0 31.5543 12.9331 c 0 0 0 0 0 0 0 0 0 14.5609 21.4888 100 0 15.9205 17.3179 5.10431 0 8.47378 18.1698 g 0 0 0 0 0 0 0 0 0 17.6939 9.45693 0 5.79334 19.33 19.331 0 99.6269 22.5655 12.4041 t 0 0 0 0 0 0 0 0 0 12.8916 34.691 0 1.85906 63.3264 0.118413 94.8069 0.373134 37.4064 56.493

M01730_2.00_shift9 (M01730_2.00)
; positions_6nt_m5 versus M01730_2.00; m=12/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.827645; ---------rmCAkmTGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 34.9915 35.7002 13.9509 72.4593 6.4454 51.5285 4.77625 0.0632758 5.21386 22.4752 c 0 0 0 0 0 0 0 0 0 14.6774 41.7355 82.7857 4.15669e-09 12.6184 29.4078 22.7645 3.20015 17.3504 27.8558 g 0 0 0 0 0 0 0 0 0 27.8558 17.3504 3.20015 22.7645 29.4078 12.6184 4.15669e-09 82.7857 41.7355 14.6774 t 0 0 0 0 0 0 0 0 0 22.4752 5.21386 0.0632758 4.77625 51.5285 6.4454 72.4593 13.9509 35.7002 34.9915

M00117_2.00_shift9 (M00117_2.00)
; positions_6nt_m5 versus M00117_2.00; m=13/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score= 0.8197; ---------rrCAgcTGyy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 31.5548 34.2567 3.62955 88.7445 2.23128 16.1589 3.44795 0.684525 11.2687 19.8202 c 0 0 0 0 0 0 0 0 0 18.1281 21.565 95.6859 2.60361 23.3167 58.2932 5.20401 2.51998e-09 32.9096 30.4969 g 0 0 0 0 0 0 0 0 0 30.4969 32.9096 2.51998e-09 5.20401 58.2932 23.3167 2.60361 95.6859 21.565 18.1281 t 0 0 0 0 0 0 0 0 0 19.8202 11.2687 0.684525 3.44795 16.1589 2.23128 88.7445 3.62955 34.2567 31.5548

M01754_2.00_rc_shift9 (M01754_2.00_rc)
; positions_6nt_m5 versus M01754_2.00_rc; m=14/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.819538; ---------rmCATATGtt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 29.4121 30.3479 0 99.9968 0 91.2055 0 0 4.74843 15.1898 c 0 0 0 0 0 0 0 0 0 20.2526 50.0296 99.9968 0.00106698 0.00106698 8.79234 0.00106698 0.00106698 11.8649 24.3456 g 0 0 0 0 0 0 0 0 0 30.0826 9.81126 0.00106698 0.00106698 8.79234 0.00106698 0.00106698 99.9968 16.8178 22.1525 t 0 0 0 0 0 0 0 0 0 20.2526 9.81126 0.00106698 0.00106698 91.2055 0.00106698 99.9968 0.00106698 66.5688 38.3121

M02820_2.00_shift9 (M02820_2.00)
; positions_6nt_m5 versus M02820_2.00; m=15/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.813394; ---------rmCATATGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 54.8576 50.925 3.89972 95.0046 1.42857 93.2788 2.0794 0.188501 3.30739 9.99219 c 0 0 0 0 0 0 0 0 0 9.04523 32.5219 95.3575 1.85014 0.840336 6.72116 0.378072 0.0942507 22.7626 38.5636 g 0 0 0 0 0 0 0 0 0 31.1558 14.5083 0.742804 3.14524 11.4286 0 0.47259 96.7955 36.5759 9.83607 t 0 0 0 0 0 0 0 0 0 4.94137 2.04479 0 0 86.3025 0 97.0699 2.92177 37.3541 41.6081

M04195_2.00_rc_shift9 (BHLHA15_rc)
; positions_6nt_m5 versus M04195_2.00_rc (BHLHA15_rc); m=16/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.813147; ---------rrCAGCTGbt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 38.3389 46.8173 0 96.2868 0.541339 23.2107 8.02578 2.07547 3.72243 11.2957 c 0 0 0 0 0 0 0 0 0 20.9967 22.5554 100 0 3.54331 74.7515 1.93322 0.377358 27.1599 23.7209 g 0 0 0 0 0 0 0 0 0 27.2425 28.1365 0 0.256082 74.0157 1.49105 1.93322 94.5912 27.8952 18.6711 t 0 0 0 0 0 0 0 0 0 13.4219 2.49077 0 3.45711 21.8996 0.54672 88.1078 2.95597 41.2224 46.3123

M04225_2.00_rc_shift9 (OLIG2_rc)
; positions_6nt_m5 versus M04225_2.00_rc (OLIG2_rc); m=17/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.812158; ---------amCAkmTGTt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 59.6154 58.0882 0 86.8132 0 52.5424 0 0 0.900901 11.0169 c 0 0 0 0 0 0 0 0 0 16.3462 31.6176 100 0 0 44.6328 0 0 9.00901 6.77966 g 0 0 0 0 0 0 0 0 0 16.3462 2.94118 0 13.1868 50.641 2.82486 0 100 18.9189 15.2542 t 0 0 0 0 0 0 0 0 0 7.69231 7.35294 0 0 49.359 0 100 0 71.1712 66.9492

M04070_2.00_shift9 (TFAP4)
; positions_6nt_m5 versus M04070_2.00 (TFAP4); m=18/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.809961; ---------amCAyrTGdt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 55.7625 43.0063 0 100 0 55.6977 0 0 26.3265 4.61538 c 0 0 0 0 0 0 0 0 0 12.8056 32.5678 99.3776 0 31.3661 18.7209 2.83976 0 0 23.3136 g 0 0 0 0 0 0 0 0 0 24.447 2.92276 0.622407 0 16.2842 25.5814 0 100 29.3878 15.3846 t 0 0 0 0 0 0 0 0 0 6.98487 21.5031 0 0 52.3497 0 97.1602 0 44.2857 56.6864

M04196_2.00_shift9 (BHLHA15)
; positions_6nt_m5 versus M04196_2.00 (BHLHA15); m=19/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.80981; ---------rmCATATGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 40.6291 26.6298 2.01068 82.9701 0.13151 83.7134 3.46012 0 2.76642 16.2399 c 0 0 0 0 0 0 0 0 0 15.6939 47.5583 96.8897 0.618779 6.28617 12.7036 13.3386 0 23.0455 29.4976 g 0 0 0 0 0 0 0 0 0 28.7613 23.5266 1.09959 14.7162 12.4671 3.58306 1.74326 95.7467 46.6442 14.5219 t 0 0 0 0 0 0 0 0 0 14.9157 2.2853 0 1.69492 81.1152 0 81.458 4.25334 27.5439 39.7407

M04194_2.00_shift9 (ATOH7)
; positions_6nt_m5 versus M04194_2.00 (ATOH7); m=20/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.808221; ---------AmCATATGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 68.7623 38.5714 1.86916 97.7654 0 87.8661 0 0 2.7619 6.05536 c 0 0 0 0 0 0 0 0 0 6.67976 35.8095 98.1308 0 17.7232 5.1046 5.14905 4.97738 12.1905 45.5882 g 0 0 0 0 0 0 0 0 0 18.664 23.1429 0 2.23464 10.7021 7.02929 0 95.0226 37.5238 3.11419 t 0 0 0 0 0 0 0 0 0 5.89391 2.47619 0 0 71.5746 0 94.8509 0 47.5238 45.2422

M04193_2.00_rc_shift9 (ATOH7_rc)
; positions_6nt_m5 versus M04193_2.00_rc (ATOH7_rc); m=21/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.80669; ---------rmCATATGkT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 42.6813 40.8708 0 93.4383 0 79.8206 6.65138 0 6.32022 6.12043 c 0 0 0 0 0 0 0 0 0 0.273598 36.6573 100 3.28084 8.04124 6.61435 11.6972 0 21.6292 14.0178 g 0 0 0 0 0 0 0 0 0 54.7196 21.7697 0 3.28084 18.5567 11.8834 0 100 29.6348 9.57552 t 0 0 0 0 0 0 0 0 0 2.32558 0.702247 0 0 73.4021 1.68161 81.6514 0 42.4157 70.2863

M04198_2.00_rc_shift9 (BHLHA15_rc)
; positions_6nt_m5 versus M04198_2.00_rc (BHLHA15_rc); m=22/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.800605; ---------rmCATATGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 44.715 27.1732 2.07702 96.1628 0 92.1755 1.15568 0 0.78906 16.0753 c 0 0 0 0 0 0 0 0 0 11.4715 53.2833 97.923 0 0.883563 6.92843 2.69375 0 18.4126 27.5595 g 0 0 0 0 0 0 0 0 0 27.5254 18.5089 0 3.13177 7.8149 0.896094 0 98.4127 53.3455 11.4975 t 0 0 0 0 0 0 0 0 0 16.2881 1.03459 0 0.705392 91.3015 0 96.1506 1.5873 27.4529 44.8677

M01729_2.00_rc_shift9 (M01729_2.00_rc)
; positions_6nt_m5 versus M01729_2.00_rc; m=23/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.794322; ---------rcCATATGyt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 36.1199 13.8914 0 99.9862 0 99.9862 0 0 6.70327 17.5491 c 0 0 0 0 0 0 0 0 0 18.3013 65.1658 99.9862 0.00460189 0.00460189 0.00460189 0.00460189 0.00460189 29.8563 23.6272 g 0 0 0 0 0 0 0 0 0 27.2775 13.4874 0.00460189 0.00460189 0.00460189 0.00460189 0.00460189 99.9862 22.0536 17.5491 t 0 0 0 0 0 0 0 0 0 18.3013 7.45553 0.00460189 0.00460189 99.9862 0.00460189 99.9862 0.00460189 41.3869 41.2746

M01718_2.00_rc_shift9 (TWIST2_rc)
; positions_6nt_m5 versus M01718_2.00_rc (TWIST2_rc); m=24/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.79361; ---------rmCATATGTk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.1828 28.2456 0.0139305 99.9582 0.0139305 78.9108 0.0139305 0.0139305 5.02683 18.1123 c 0 0 0 0 0 0 0 0 0 19.9871 57.9511 99.9582 0.0139305 21.7001 0.0139305 0.0139305 0.0139305 5.02683 18.1123 g 0 0 0 0 0 0 0 0 0 29.843 6.90164 0.0139305 0.0139305 0.0139305 21.0614 0.0139305 99.9582 15.4736 27.2271 t 0 0 0 0 0 0 0 0 0 19.9871 6.90164 0.0139305 0.0139305 78.2721 0.0139305 99.9582 0.0139305 74.4728 36.5483

M04174_2.00_shift9 (OLIG3)
; positions_6nt_m5 versus M04174_2.00 (OLIG3); m=25/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.793407; ---------aACAkmTGkt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 57.0342 73.8916 0 92.5926 1.91693 58.0808 9.47368 4.09357 0 6.63717 c 0 0 0 0 0 0 0 0 0 18.251 5.41872 100 0.617284 0 37.8788 4.21053 0 7.40741 22.5664 g 0 0 0 0 0 0 0 0 0 24.7148 20.197 0 6.79012 47.9233 1.26263 7.36842 87.7193 56.7901 4.42478 t 0 0 0 0 0 0 0 0 0 0 0.492611 0 0 50.1597 2.77778 78.9474 8.18713 35.8025 66.3717

M04201_2.00_shift9 (NEUROG1)
; positions_6nt_m5 versus M04201_2.00 (NEUROG1); m=26/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.793097; ---------rvCATATGby ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 41.3182 41.5561 0 98.6709 0 96.414 0 0 1.91998 2.44342 c 0 0 0 0 0 0 0 0 0 9.97818 30.006 99.6694 0.00991867 2.0284 2.09343 2.0384 0.18027 28.7595 47.4799 g 0 0 0 0 0 0 0 0 0 45.526 27.0708 0.330628 1.23983 1.88351 1.49254 0 99.6294 28.4379 7.86223 t 0 0 0 0 0 0 0 0 0 3.17765 1.36711 0 0.0793493 96.0881 0 97.9616 0.190285 40.8826 42.2144

M04167_2.00_rc_shift9 (ATOH1_rc)
; positions_6nt_m5 versus M04167_2.00_rc (ATOH1_rc); m=27/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.792987; ---------rmCATATGkt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 35.6922 35.0202 0 96.9204 0 93.2968 0 0 0.0202388 5.28822 c 0 0 0 0 0 0 0 0 0 5.65763 44.4534 99.9595 0 6.0849 2.36027 5.25407 0 24.5497 19.6241 g 0 0 0 0 0 0 0 0 0 54.1932 20 0.0404613 3.07964 3.89871 4.3429 0 100 36.3894 13.1704 t 0 0 0 0 0 0 0 0 0 4.45698 0.526316 0 0 90.0164 0 94.7459 0 39.0407 61.9173

M08738_2.00_shift9 (ATOH1)
; positions_6nt_m5 versus M08738_2.00 (ATOH1); m=28/244; ncol2=9; w=0; offset=0; strand=D; shift=9; score=0.792101; ---------rrCAGmTGG- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 53.4 32.4 0.2 99.8 0 58.6 1.8 0.2 3.2 0 c 0 0 0 0 0 0 0 0 0 4.2 15.4 99.6 0 0.8 38 0.6 0 11 0 g 0 0 0 0 0 0 0 0 0 37.8 52.2 0.2 0 97.4 3.4 0.2 99 72.2 0 t 0 0 0 0 0 0 0 0 0 4.6 0 0 0.2 1.8 0 97.4 0.8 13.6 0

M08779_2.00_shift9 (M08779_2.00)
; positions_6nt_m5 versus M08779_2.00; m=29/244; ncol2=9; w=0; offset=0; strand=D; shift=9; score=0.792101; ---------rrCAGmTGG- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 53.4 32.4 0.2 99.8 0 58.6 1.8 0.2 3.2 0 c 0 0 0 0 0 0 0 0 0 4.2 15.4 99.6 0 0.8 38 0.6 0 11 0 g 0 0 0 0 0 0 0 0 0 37.8 52.2 0.2 0 97.4 3.4 0.2 99 72.2 0 t 0 0 0 0 0 0 0 0 0 4.6 0 0 0.2 1.8 0 97.4 0.8 13.6 0

M04197_2.00_shift9 (BHLHA15)
; positions_6nt_m5 versus M04197_2.00 (BHLHA15); m=30/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.791856; ---------amCAGCTGkt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 48.3044 56.4901 0.316937 99.8727 0.247729 19.4834 1.00959 0 0.661122 10.5163 c 0 0 0 0 0 0 0 0 0 17.0321 25.1691 99.4422 0 0.206441 80.3936 0 0 15.6963 24.2957 g 0 0 0 0 0 0 0 0 0 22.6033 17.5081 0 0 80.9661 0.122989 0 100 27.2126 16.724 t 0 0 0 0 0 0 0 0 0 12.0602 0.832726 0.240872 0.127324 18.5797 0 98.9904 0 56.4299 48.464

M04136_2.00_shift9 (ASCL1)
; positions_6nt_m5 versus M04136_2.00 (ASCL1); m=31/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.791638; ---------rrCAGCTGyy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 35.9057 27.534 0 95.5389 1.27368 16.3717 3.61074 0.3663 4.2117 18.8714 c 0 0 0 0 0 0 0 0 0 15.2957 11.8835 99.2202 1.94346 14.3044 73.6215 0.352268 0 51.2859 30.111 g 0 0 0 0 0 0 0 0 0 31.2847 56.466 0 0.927562 70.6401 10.0068 0.792602 99.0385 15.1696 17.3451 t 0 0 0 0 0 0 0 0 0 17.5139 4.1165 0.779817 1.59011 13.7818 0 95.2444 0.595238 29.3328 33.6725

M08737_2.00_shift9 (NEUROD2,NEUROD4,NEUROD6)
; positions_6nt_m5 versus M08737_2.00 (NEUROD2,NEUROD4,NEUROD6); m=32/244; ncol2=9; w=0; offset=0; strand=D; shift=9; score=0.790063; ---------rrCAGmTGG- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 46.4 47.2 0.8 100 0 67.8 11.2 0 0.6 0 c 0 0 0 0 0 0 0 0 0 10 9.8 99 0 2.2 28 0.6 0 13.4 0 g 0 0 0 0 0 0 0 0 0 40.6 42.6 0.2 0 95.4 3.2 0.6 95.2 83.4 0 t 0 0 0 0 0 0 0 0 0 3 0.4 0 0 2.4 1 87.6 4.8 2.6 0

M04208_2.00_rc_shift9 (ASCL2_rc)
; positions_6nt_m5 versus M04208_2.00_rc (ASCL2_rc); m=33/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.788388; ---------rrCAGCTGyy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 39.042 32.5863 0 94.7773 0.400155 15.7758 3.79983 1.22037 3.26847 13.9384 c 0 0 0 0 0 0 0 0 0 14.8929 11.5579 100 0.290152 12.5984 72.042 0.644614 0.565971 52.1131 30.344 g 0 0 0 0 0 0 0 0 0 30.9022 52.6631 0 1.67264 71.6794 11.9875 1.35708 98.2137 12.3138 14.1545 t 0 0 0 0 0 0 0 0 0 15.163 3.19263 0 3.25994 15.3221 0.194603 94.1985 0 32.3047 41.5631

M04179_2.00_shift9 (NEUROG2,NEUROG3)
; positions_6nt_m5 versus M04179_2.00 (NEUROG2,NEUROG3); m=34/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.787933; ---------raCATATGty ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 46.1627 58.8994 0.344828 97.6651 0 93.3627 0 0 4.5283 3.04685 c 0 0 0 0 0 0 0 0 0 5.88575 21.5094 99.6552 0 2.70349 1.29222 0.625195 0 20.2201 45.4153 g 0 0 0 0 0 0 0 0 0 45.5568 17.9874 0 2.33487 4.88372 5.34508 0 100 15.8491 5.57632 t 0 0 0 0 0 0 0 0 0 2.39469 1.60377 0 0 92.4128 0 99.3748 0 59.4025 45.9615

M04180_2.00_shift9 (NEUROG2,NEUROG3)
; positions_6nt_m5 versus M04180_2.00 (NEUROG2,NEUROG3); m=35/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.785339; ---------raCATATGty ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 39.0244 55.852 0 98.1842 0 90.8109 1.31885 0.727273 1.40063 2.63865 c 0 0 0 0 0 0 0 0 0 4.13141 22.6684 98.2606 0.830091 4.16766 4.3906 0.801655 0.597403 23.3615 53.6037 g 0 0 0 0 0 0 0 0 0 55.1767 19.683 1.73936 0.985733 5.17365 4.79846 0 98.3117 19.8732 4.91082 t 0 0 0 0 0 0 0 0 0 1.6675 1.79657 0 0 90.6587 0 97.8795 0.363636 55.3647 38.8468

M04202_2.00_shift9 (NEUROG1)
; positions_6nt_m5 versus M04202_2.00 (NEUROG1); m=36/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.785271; ---------rvCATATGby ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 45.2097 46.9111 0.172414 99.6924 0 97.2102 0.44799 0 0.592483 1.77338 c 0 0 0 0 0 0 0 0 0 4.41253 26.5938 99.7722 0.0553744 0.928922 1.84785 0.1166 0 26.2791 48.9003 g 0 0 0 0 0 0 0 0 0 48.2494 25.773 0.0554187 0.252261 1.96572 0.935925 0 100 26.7543 4.93436 t 0 0 0 0 0 0 0 0 0 2.1284 0.722089 0 0 97.1054 0 99.4354 0 46.3741 44.392

M04169_2.00_rc_shift9 (ATOH1_rc)
; positions_6nt_m5 versus M04169_2.00_rc (ATOH1_rc); m=37/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.785254; ---------rmCATATGkT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 36.7804 42.148 0 99.588 0 92.3721 0 0 0.267072 4.71254 c 0 0 0 0 0 0 0 0 0 2.74933 34.8484 100 0 2.23715 5.19977 0.629618 0 24.6334 17.312 g 0 0 0 0 0 0 0 0 0 58.1635 22.2653 0 0.411973 5.48898 2.42817 0 100 31.1584 5.97926 t 0 0 0 0 0 0 0 0 0 2.30685 0.738336 0 0 92.2739 0 99.3704 0 43.9411 71.9962

M04160_2.00_shift9 (NEUROD2,NEUROD4,NEUROD6)
; positions_6nt_m5 versus M04160_2.00 (NEUROD2,NEUROD4,NEUROD6); m=38/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.784857; ---------rrCATATGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 48.6504 53.0864 0 94.2225 0.66357 92.3131 1.56038 0 0 7.95957 c 0 0 0 0 0 0 0 0 0 9.4473 16.0494 98.9513 1.35521 6.76841 1.88679 5.35957 0.452148 4.82709 40.6191 g 0 0 0 0 0 0 0 0 0 36.2468 28.4568 1.04869 4.42225 4.91042 5.80014 3.45997 99.5479 56.5562 8.59128 t 0 0 0 0 0 0 0 0 0 5.65553 2.40741 0 0 87.6576 0 89.6201 0 38.6167 42.8301

M02799_2.00_shift9 (NEUROG2,NEUROG3)
; positions_6nt_m5 versus M02799_2.00 (NEUROG2,NEUROG3); m=39/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.784215; ---------raCATATGyy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 58.042 66.203 0.386698 97.6444 0 97.4223 0 0.0775194 1.27857 3.22355 c 0 0 0 0 0 0 0 0 0 8.04196 18.1865 99.3813 0.607903 0.881705 1.89538 0.1554 0.310078 26.6176 47.232 g 0 0 0 0 0 0 0 0 0 31.8182 14.6316 0 1.67173 4.70242 0 0 99.6124 22.3169 6.79748 t 0 0 0 0 0 0 0 0 0 2.0979 0.978877 0.232019 0.0759878 94.4159 0.682335 99.8446 0 49.7869 42.747

M01750_2.00_shift10 (M01750_2.00)
; positions_6nt_m5 versus M01750_2.00; m=40/244; ncol2=9; w=0; offset=1; strand=D; shift=10; score=0.78037; ----------sCAGrTGyk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 24.1036 7.9879 84.8296 2.16183 25.8214 2.64264 2.78341 12.4622 22.3232 c 0 0 0 0 0 0 0 0 0 0 33.5274 88.937 7.619 16.9617 17.3086 3.35945 1.48242 30.9601 24.1825 g 0 0 0 0 0 0 0 0 0 0 30.035 0.876278 4.57517 76.0169 54.6639 1.07442 90.3488 24.3541 27.8165 t 0 0 0 0 0 0 0 0 0 0 12.334 2.19884 2.97619 4.8596 2.20605 92.9235 5.38533 32.2236 25.6778

M04204_2.00_shift9 (NEUROG1)
; positions_6nt_m5 versus M04204_2.00 (NEUROG1); m=41/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.778424; ---------rrCATATGty ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 48.7857 53.6595 0 99.3644 0 97.9002 0.446844 0 0.188111 1.74542 c 0 0 0 0 0 0 0 0 0 4.32547 20.809 99.2901 0 1.29941 0.718364 0.204804 0.242945 23.2694 46.2094 g 0 0 0 0 0 0 0 0 0 45.4352 25.2681 0.392303 0 1.42753 1.38147 0.390989 99.3272 21.5199 4.54866 t 0 0 0 0 0 0 0 0 0 1.45364 0.263405 0.317579 0.635633 97.2731 0 98.9574 0.429826 55.0226 47.4965

M02807_2.00_rc_shift9 (TCF4_rc)
; positions_6nt_m5 versus M02807_2.00_rc (TCF4_rc); m=42/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.778073; ---------wvCAGGTGyr ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 26.4568 30.986 0.122597 99.4279 0 5.56204 0 0.0638695 2.01121 25.4979 c 0 0 0 0 0 0 0 0 0 23.7915 31.0991 99.7205 0 1.86255 9.65227 0 0 47.4036 10.4647 g 0 0 0 0 0 0 0 0 0 23.6636 36.0757 0.0245194 0 97.8679 84.7857 0 99.9067 12.1214 40.7376 t 0 0 0 0 0 0 0 0 0 26.088 1.83919 0.132405 0.572071 0.269516 0 100 0.0294782 38.4638 23.2997

M01740_2.00_rc_shift10 (M01740_2.00_rc)
; positions_6nt_m5 versus M01740_2.00_rc; m=43/244; ncol2=9; w=0; offset=1; strand=R; shift=10; score=0.777216; ----------sCAGrTGyk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 24.5979 5.88129 87.2648 3.20679 25.2322 0.349873 4.82083 9.12452 22.3098 c 0 0 0 0 0 0 0 0 0 0 35.2569 91.9989 4.34466 13.6709 14.2694 2.13788 0.846154 30.2945 22.0878 g 0 0 0 0 0 0 0 0 0 0 30.0439 0.102466 4.21625 77.8878 57.8654 0.0159199 93.0323 24.3119 27.5232 t 0 0 0 0 0 0 0 0 0 0 10.1013 2.01733 4.1743 5.23449 2.63299 97.4963 1.30076 36.2691 28.0792

M02775_2.00_rc_shift9 (TCF3_rc)
; positions_6nt_m5 versus M02775_2.00_rc (TCF3_rc); m=44/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.776762; ---------hvCAGGTGyk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 28.8114 32.7478 0.063678 98.9219 0 3.38422 0.242874 0 2.73112 23.5799 c 0 0 0 0 0 0 0 0 0 26.8368 25.3622 99.325 0.0887874 5.62682 13.3554 0 0 36.4406 13.0017 g 0 0 0 0 0 0 0 0 0 17.8613 38.646 0.267448 0.443937 94.3732 83.2604 0.0639141 100 16.9381 27.2214 t 0 0 0 0 0 0 0 0 0 26.4906 3.24401 0.343861 0.545408 0 0 99.6932 0 43.8902 36.1969

M04207_2.00_shift9 (ASCL2)
; positions_6nt_m5 versus M04207_2.00 (ASCL2); m=45/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.776447; ---------rrCAGCTGyy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 32.2971 29.5182 0 95.3609 1.12827 9.12531 1.65113 0 3.14644 13.2216 c 0 0 0 0 0 0 0 0 0 20.3876 13.2037 100 0.943215 18.6758 72.1001 1.61228 0 54.9456 35.6883 g 0 0 0 0 0 0 0 0 0 33.0844 54.235 0 1.79018 73.5451 18.7746 0.505051 100 13.9414 22.3658 t 0 0 0 0 0 0 0 0 0 14.2309 3.04311 0 1.90568 6.65083 0 96.2315 0 27.9665 28.7243

M04135_2.00_shift9 (ASCL1)
; positions_6nt_m5 versus M04135_2.00 (ASCL1); m=46/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.776278; ---------rrCAGCTGcy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 28.7041 25.2269 0 91.0272 1.6633 11.2465 2.52352 1.1571 3.27475 19.1027 c 0 0 0 0 0 0 0 0 0 20.9787 9.8525 99.6838 3.23845 20.0218 68.0808 0.513259 0 56.7068 33.6959 g 0 0 0 0 0 0 0 0 0 33.8695 58.2262 0 1.23762 68.5994 20.3641 2.58768 98.1976 15.0601 20.145 t 0 0 0 0 0 0 0 0 0 16.4477 6.6944 0.316241 4.4967 9.71553 0.308547 94.3755 0.645305 24.9584 27.0564

M04203_2.00_rc_shift9 (NEUROG1_rc)
; positions_6nt_m5 versus M04203_2.00_rc (NEUROG1_rc); m=47/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.77474; ---------raCATATGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 45.1894 53.9664 0 98.2407 0.110011 97.7765 0 0 0.653781 1.80276 c 0 0 0 0 0 0 0 0 0 3.21614 24.9076 99.7731 0 3.13531 0 2.38624 0 18.6185 48.8865 g 0 0 0 0 0 0 0 0 0 50.695 20.7279 0.226886 1.75929 0 2.22346 0 100 25.7817 4.95758 t 0 0 0 0 0 0 0 0 0 0.899428 0.398067 0 0 96.7547 0 97.6138 0 54.946 44.3531

M04108_2.00_rc_shift9 (BHLHE23_rc)
; positions_6nt_m5 versus M04108_2.00_rc (BHLHE23_rc); m=48/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.774739; ---------rmCATATGkt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 49.3617 33.3839 0 95.4545 3.49933 97.6012 7.28745 0 3.52761 4.15369 c 0 0 0 0 0 0 0 0 0 4.8227 47.3445 92.2096 0 6.59489 2.3988 4.31849 0 19.7853 11.5265 g 0 0 0 0 0 0 0 0 0 43.1206 19.2716 7.79037 4.54545 2.28802 0 0.539811 99.5413 45.3988 16.7186 t 0 0 0 0 0 0 0 0 0 2.69504 0 0 0 87.6178 0 87.8543 0.458716 31.2883 67.6012

M08928_2.00_rc_shift9 (ZBTB18_rc)
; positions_6nt_m5 versus M08928_2.00_rc (ZBTB18_rc); m=49/244; ncol2=11; w=0; offset=0; strand=R; shift=9; score=0.774209; ---------kCCAGmTGyk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 7.4 11.6 0.8 97.2 0.4 44.8 0.4 0.2 12.2 6 c 0 0 0 0 0 0 0 0 0 14.4 73.6 98.4 1.2 1.4 36.8 1 2.4 26.8 5 g 0 0 0 0 0 0 0 0 0 28 14.4 0.2 0.6 86.6 3 10.8 94.8 1.2 45 t 0 0 0 0 0 0 0 0 0 50.2 0.4 0.6 1 11.6 15.4 87.8 2.6 59.8 44

M03605_2.00_shift9 (TWIST2)
; positions_6nt_m5 versus M03605_2.00 (TWIST2); m=50/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.773488; ---------mACACrTGTt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 56.8528 74.9164 3.84615 96.9697 0.619195 64.7399 0 0 1.82927 8.55746 c 0 0 0 0 0 0 0 0 0 25.3807 12.709 95.7265 0 69.3498 0 0.884956 0 11.5854 20.7824 g 0 0 0 0 0 0 0 0 0 12.4365 8.02676 0.42735 2.5974 12.3839 34.3931 0 100 18.2927 15.8924 t 0 0 0 0 0 0 0 0 0 5.32995 4.34783 0 0.4329 17.6471 0.867052 99.115 0 68.2927 54.7677

M04110_2.00_shift9 (BHLHE23)
; positions_6nt_m5 versus M04110_2.00 (BHLHE23); m=51/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.77215; ---------RmCATATGsy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 70.0348 26.9231 0 88.9381 0.406504 97.5728 0.460829 0 2.48756 1.4881 c 0 0 0 0 0 0 0 0 0 3.48432 48.5577 95.2607 0 13.4146 0 6.91244 3.82775 25.8706 27.9762 g 0 0 0 0 0 0 0 0 0 25.784 24.5192 4.73934 11.0619 4.47154 2.42718 0 96.1722 49.2537 10.7143 t 0 0 0 0 0 0 0 0 0 0.696864 0 0 0 81.7073 0 92.6267 0 22.3881 59.8214

M00756_2.00_rc_shift9 (M00756_2.00_rc)
; positions_6nt_m5 versus M00756_2.00_rc; m=52/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.769511; ---------yrCAGCTGmk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 21.2551 46.7447 0.0178229 93.166 7.11324 13.6912 0.0178229 13.6912 25.0617 23.9759 c 0 0 0 0 0 0 0 0 0 29.342 7.82247 92.2231 0.0178229 6.91063 71.4543 6.91063 0.0178229 67.4128 17.1954 g 0 0 0 0 0 0 0 0 0 21.2551 30.1874 0.0178229 6.79836 71.4543 7.74129 0.0178229 86.2732 3.76275 30.5521 t 0 0 0 0 0 0 0 0 0 28.1479 15.2455 7.74129 0.0178229 14.5218 7.11324 93.0537 0.0178229 3.76275 28.2767

M08351_2.00_rc_shift10 (ZBTB42_rc)
; positions_6nt_m5 versus M08351_2.00_rc (ZBTB42_rc); m=53/244; ncol2=9; w=0; offset=1; strand=R; shift=10; score=0.769265; ----------cCAGmTGyk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 9.42623 0.058548 99.8244 0.058548 46.6628 0.058548 0.058548 1.93208 3.80562 c 0 0 0 0 0 0 0 0 0 0 66.5691 99.8244 0.058548 0.058548 52.0492 0.058548 0.058548 31.9087 8.48946 g 0 0 0 0 0 0 0 0 0 0 23.9461 0.058548 0.058548 99.8244 1.22951 12.2365 99.8244 3.33724 60.7143 t 0 0 0 0 0 0 0 0 0 0 0.058548 0.058548 0.058548 0.058548 0.058548 87.6464 0.058548 62.822 26.9906

M04161_2.00_shift9 (NEUROD2,NEUROD4,NEUROD6)
; positions_6nt_m5 versus M04161_2.00 (NEUROD2,NEUROD4,NEUROD6); m=54/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.76888; ---------rmCATATGyy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 48.6284 34.1064 3.05556 90.7507 0 88.9619 0 0 2.27545 5.17677 c 0 0 0 0 0 0 0 0 0 9.47631 58.2538 94.0278 0.268097 14.0863 1.44547 14.1593 0.587372 36.5269 34.9747 g 0 0 0 0 0 0 0 0 0 35.7855 3.95634 2.91667 8.98123 0 9.59264 0.252845 99.4126 16.6467 9.34343 t 0 0 0 0 0 0 0 0 0 6.10973 3.68349 0 0 85.9137 0 85.5879 0 44.5509 50.5051

M08350_2.00_rc_shift10 (ZBTB18_rc)
; positions_6nt_m5 versus M08350_2.00_rc (ZBTB18_rc); m=55/244; ncol2=9; w=0; offset=1; strand=R; shift=10; score=0.766353; ----------CCAGmTGYk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 8.46963 0.0584112 99.8248 0.0584112 53.3294 0.0584112 0.0584112 0.0584112 3.56308 c 0 0 0 0 0 0 0 0 0 0 76.9276 99.8248 0.0584112 0.0584112 45.8528 0.0584112 0.0584112 29.264 8.23598 g 0 0 0 0 0 0 0 0 0 0 14.5444 0.0584112 0.0584112 99.8248 0.759346 15.479 99.8248 0.0584112 58.0023 t 0 0 0 0 0 0 0 0 0 0 0.0584112 0.0584112 0.0584112 0.0584112 0.0584112 84.4042 0.0584112 70.6192 30.1986

M04210_2.00_rc_shift9 (ASCL2_rc)
; positions_6nt_m5 versus M04210_2.00_rc (ASCL2_rc); m=56/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.764531; ---------rrCAGCTGcy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 31.1901 25.7839 0 96.4189 0.151745 8.25853 3.04699 0.0399202 3.28528 14.6166 c 0 0 0 0 0 0 0 0 0 19.2093 11.541 100 1.46323 15.6601 74.9252 0 0 60.476 30.3914 g 0 0 0 0 0 0 0 0 0 35.4233 57.7385 0 0 75.9939 15.4399 5.02937 99.9601 12.8059 21.4856 t 0 0 0 0 0 0 0 0 0 14.1773 4.93662 0 2.11783 8.19423 1.37642 91.9236 0 23.4328 33.5064

M02795_2.00_shift9 (NEUROD2,NEUROD4,NEUROD6)
; positions_6nt_m5 versus M02795_2.00 (NEUROD2,NEUROD4,NEUROD6); m=57/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.764093; ---------rmCATATGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 43.1632 33.7023 6.59211 82.8721 0.228702 91.0499 2.67078 0 0 5.98614 c 0 0 0 0 0 0 0 0 0 6.36421 43.3579 93.4079 0 2.17267 0 15.8192 5.64804 14.6163 48.4562 g 0 0 0 0 0 0 0 0 0 37.3031 22.9397 0 17.1279 6.86106 8.95009 0 94.352 53.2887 7.49842 t 0 0 0 0 0 0 0 0 0 13.1695 0 0 0 90.7376 0 81.51 0 32.095 38.0592

M04182_2.00_rc_shift9 (NEUROG2,NEUROG3_rc)
; positions_6nt_m5 versus M04182_2.00_rc (NEUROG2,NEUROG3_rc); m=58/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.763514; ---------rrCAtAtGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 34.127 56.5574 0 85.7143 1.76471 79.4118 4.87805 0 3.57143 3.05344 c 0 0 0 0 0 0 0 0 0 11.9048 6.55738 88.5246 0 21.1765 3.67647 18.9024 16.9231 0 54.1985 g 0 0 0 0 0 0 0 0 0 51.5873 31.9672 11.4754 14.2857 13.5294 16.9118 10.3659 83.0769 39.2857 14.5038 t 0 0 0 0 0 0 0 0 0 2.38095 4.91803 0 0 63.5294 0 65.8537 0 57.1429 28.2443

M04211_2.00_shift9 (ASCL2)
; positions_6nt_m5 versus M04211_2.00 (ASCL2); m=59/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.762872; ---------rrCAGCTGyy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 42.0679 27.7125 0 96.7176 0 10.0471 1.821 0 1.28472 12.0363 c 0 0 0 0 0 0 0 0 0 17.1271 10.7464 99.1393 0.954198 9.72489 79.5604 0 0 58.5069 29.5185 g 0 0 0 0 0 0 0 0 0 30.5841 59.848 0 0 81.0621 10.3925 0 100 10.7292 17.4822 t 0 0 0 0 0 0 0 0 0 10.221 1.69316 0.86072 2.32824 9.21305 0 98.179 0 29.4792 40.9629

M03620_2.00_rc_shift9 (M03620_2.00_rc)
; positions_6nt_m5 versus M03620_2.00_rc; m=60/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.761961; ---------gwCAGsTGwy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 23.4143 29.0525 0 88.8657 3.66404 7.61952 4.76858 0 38.1661 8.30721 c 0 0 0 0 0 0 0 0 0 12.5294 12.2161 98.0799 6.47182 21.0259 63.5956 0 0 18.0251 49.2947 g 0 0 0 0 0 0 0 0 0 57.87 22.3962 0 0 71.9842 25.1494 5.68022 100 7.44514 14.2633 t 0 0 0 0 0 0 0 0 0 6.18637 36.3352 1.92012 4.66249 3.32582 3.63546 89.5512 0 36.3636 28.1348

M08762_2.00_rc_shift9 (M08762_2.00_rc)
; positions_6nt_m5 versus M08762_2.00_rc; m=61/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.761848; ---------rgCAGgTGkg ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 41 15.6 1.6 97.2 0.8 15.2 11.2 4.4 9.6 11.4 c 0 0 0 0 0 0 0 0 0 5.6 17 83.6 0.4 0.4 24 1.4 2.4 6 22 g 0 0 0 0 0 0 0 0 0 35.6 65.6 13.6 1 97.8 59 4.4 90.8 53.6 53 t 0 0 0 0 0 0 0 0 0 17.8 1.8 1.2 1.4 1 1.8 83 2.4 30.8 13.6

M02800_2.00_shift9 (NEUROG2,NEUROG3)
; positions_6nt_m5 versus M02800_2.00 (NEUROG2,NEUROG3); m=62/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.761042; ---------raCATATGtY ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 57.4766 66.4587 0.231481 99.3007 0.879121 97.0387 1.15207 0 0.402145 0 c 0 0 0 0 0 0 0 0 0 0.46729 23.4009 98.6111 0 1.0989 1.82232 0.691244 0 22.7882 72.0657 g 0 0 0 0 0 0 0 0 0 42.0561 10.1404 0 0.699301 4.3956 1.13895 0 100 19.7051 0 t 0 0 0 0 0 0 0 0 0 0 0 1.15741 0 93.6264 0 98.1567 0 57.1046 27.9343

M09393_2.00_shift9 (TCF7L2)
; positions_6nt_m5 versus M09393_2.00 (TCF7L2); m=63/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.756809; ---------dGCAGsTGks ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.7847 12.6761 2.8169 93.7626 3.01811 9.45674 9.05433 0.402414 8.4507 9.25553 c 0 0 0 0 0 0 0 0 0 4.22535 14.6881 89.5372 0.804829 10.4628 58.9537 0.603622 1.40845 10.664 27.3642 g 0 0 0 0 0 0 0 0 0 38.2294 68.4105 5.23139 2.61569 82.495 29.9799 0.804829 95.171 46.0765 52.9175 t 0 0 0 0 0 0 0 0 0 26.7606 4.22535 2.41449 2.8169 4.02414 1.60966 89.5372 3.01811 34.8089 10.4628

M04168_2.00_rc_shift9 (ATOH1_rc)
; positions_6nt_m5 versus M04168_2.00_rc (ATOH1_rc); m=64/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.755738; ---------rACAGCTGTT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 35.2713 71.0874 0 99.8411 0 22.1333 0 0 0 2.60524 c 0 0 0 0 0 0 0 0 0 3.72524 8.41674 100 0 1.05282 76.5095 0.382366 0.0908884 17.1967 17.5218 g 0 0 0 0 0 0 0 0 0 59.41 16.5833 0 0 79.8148 1.35723 0.719748 99.9091 6.45161 10.0238 t 0 0 0 0 0 0 0 0 0 1.59345 3.91265 0 0.158946 19.1323 0 98.8979 0 76.3517 69.8491

M04181_2.00_rc_shift9 (NEUROG2,NEUROG3_rc)
; positions_6nt_m5 versus M04181_2.00_rc (NEUROG2,NEUROG3_rc); m=65/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.75475; ---------raCATATGty ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 35.7447 58.7065 0 76.9084 0 75.4682 0.852878 0 1.73697 6.38298 c 0 0 0 0 0 0 0 0 0 11.2766 20.1493 85.7447 3.43511 22.3801 0 13.2196 13.1466 17.6179 49.3617 g 0 0 0 0 0 0 0 0 0 49.7872 17.1642 14.2553 19.6565 6.03908 24.5318 0 86.8534 20.0993 8.08511 t 0 0 0 0 0 0 0 0 0 3.19149 3.9801 0 0 71.5808 0 85.9275 0 60.5459 36.1702

M04200_2.00_rc_shift9 (BHLHE22_rc)
; positions_6nt_m5 versus M04200_2.00_rc (BHLHE22_rc); m=66/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.753535; ---------rmCATATGkT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 54.2212 34.726 2.3531 93.76 0 98.1106 3.22248 0 1.77004 8.35446 c 0 0 0 0 0 0 0 0 0 4.0544 41.3398 97.179 0.504514 0.994259 0.777994 5.32354 0 23.8176 6.55792 g 0 0 0 0 0 0 0 0 0 36.387 22.3198 0.288978 4.35475 0.112029 1.11142 0.425367 98.6313 39.0399 7.25229 t 0 0 0 0 0 0 0 0 0 5.33744 1.6145 0.178891 1.38078 98.8937 0 91.0286 1.36872 35.3724 77.8353

M02784_2.00_rc_shift9 (BHLHE23_rc)
; positions_6nt_m5 versus M02784_2.00_rc (BHLHE23_rc); m=67/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.753492; ---------rrCATATGkT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 62.5752 38.5797 0.760456 89.81 0.378788 99.6169 1.43369 0 0.767754 2.84168 c 0 0 0 0 0 0 0 0 0 2.52708 23.6084 98.8593 0 0.378788 0 4.30108 0 19.0019 23.2747 g 0 0 0 0 0 0 0 0 0 30.5656 37.0441 0.380228 8.29016 0.757576 0.383142 1.07527 98.8593 43.9539 3.51827 t 0 0 0 0 0 0 0 0 0 4.33213 0.767754 0 1.89983 98.4848 0 93.19 1.14068 36.2764 70.3654

M08758_2.00_shift7 (NEUROG3)
; positions_6nt_m5 versus M08758_2.00 (NEUROG3); m=68/244; ncol2=12; w=-2; offset=-2; strand=D; shift=7; score=0.753397; -------rsrrCAGATGGy ; cor=; Ncor= a 0 0 0 0 0 0 0 26.699 11.6505 57.767 43.2039 0.485437 100 0 77.1845 0.970874 0.485437 3.8835 7.28155 c 0 0 0 0 0 0 0 17.4757 25.7282 8.73786 13.1068 98.0583 0 0 22.3301 0 0.485437 10.1942 40.7767 g 0 0 0 0 0 0 0 44.1748 39.8058 28.6408 43.6893 0.485437 0 97.0874 0.485437 0.485437 95.6311 72.8155 21.8447 t 0 0 0 0 0 0 0 11.6505 22.8155 4.85437 0 0.970874 0 2.91262 0 98.5437 3.39806 13.1068 30.0971

M04115_2.00_shift9 (MAX)
; positions_6nt_m5 versus M04115_2.00 (MAX); m=69/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.751244; ---------akCACRTGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 38.74 13.4364 0 81.1865 0 72.6478 0 0 11.5524 16.406 c 0 0 0 0 0 0 0 0 0 17.3352 19.4028 100 0 100 0 0 0 16.9422 31.214 g 0 0 0 0 0 0 0 0 0 20.3189 40.3038 0 18.8135 0 27.3522 0 100 45.8769 13.4774 t 0 0 0 0 0 0 0 0 0 23.6059 26.857 0 0 0 0 100 0 25.6285 38.9026

M04171_2.00_shift9 (OLIG3)
; positions_6nt_m5 versus M04171_2.00 (OLIG3); m=70/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.74934; ---------amCATATGgy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 64.6194 51.8277 3.53718 94.4431 0 97.8861 2.42578 0.0119732 0.879226 9.3322 c 0 0 0 0 0 0 0 0 0 5.08899 32.3107 96.3134 0.085491 0.739905 1.34177 4.24813 0 23.6432 25.7963 g 0 0 0 0 0 0 0 0 0 23.9241 15.5679 0.149458 3.95701 2.28242 0.696203 0 92.5886 61.8096 5.37775 t 0 0 0 0 0 0 0 0 0 6.36751 0.293734 0 1.51441 96.9777 0.0759494 93.3261 7.39943 13.668 59.4938

M01748_2.00_shift9 (M01748_2.00)
; positions_6nt_m5 versus M01748_2.00; m=71/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.749137; ---------acMaTATGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 42.4799 16.9637 27.1365 66.5113 0.136832 79.3894 7.5714 1.16833 3.86337 9.17633 c 0 0 0 0 0 0 0 0 0 11.3479 59.2091 68.7777 3.48118 6.43014 14.0745 15.0952 0.0903175 15.0525 27.0213 g 0 0 0 0 0 0 0 0 0 23.5478 17.1342 2.6936 18.6785 14.3105 5.60896 1.05588 86.9711 42.1629 23.4912 t 0 0 0 0 0 0 0 0 0 22.6244 6.69308 1.39219 11.3291 79.1225 0.927154 76.2775 11.7703 38.9213 40.3111

M02805_2.00_rc_shift9 (FIGLA_rc)
; positions_6nt_m5 versus M02805_2.00_rc (FIGLA_rc); m=72/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.748915; ---------wmCAGGTGkw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 42.3034 46.7416 3.39603 96.0604 0 0 0.76087 1.6031 13.3146 25.2247 c 0 0 0 0 0 0 0 0 0 16.236 31.9663 92.999 0.917431 14.8095 22.8435 0 0 8.98876 9.83146 g 0 0 0 0 0 0 0 0 0 15.8989 12.6404 1.72414 0 84.7619 77.1565 2.5 98.3969 38.9326 15.1685 t 0 0 0 0 0 0 0 0 0 25.5618 8.65169 1.88088 3.02213 0.428571 0 96.7391 0 38.764 49.7753

M04071_2.00_shift9 (TFAP4)
; positions_6nt_m5 versus M04071_2.00 (TFAP4); m=73/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.748337; ---------awCAGCTGwt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 45.8895 34.3264 0 99.6608 0.258918 2.79539 0 0 36.547 11.9374 c 0 0 0 0 0 0 0 0 0 20.2329 21.3582 100 0 4.3153 93.1412 0.0616903 0 7.33599 22.3649 g 0 0 0 0 0 0 0 0 0 22.1922 7.84228 0 0 92.9804 4.0634 0.246761 100 21.0328 20.0931 t 0 0 0 0 0 0 0 0 0 11.6854 36.4732 0 0.339192 2.44534 0 99.6915 0 35.0842 45.6046

M04172_2.00_shift9 (OLIG3)
; positions_6nt_m5 versus M04172_2.00 (OLIG3); m=74/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.748027; ---------AACAkmTGbT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 69.1542 90.5537 0 90.2597 3.65591 39.5833 11.7647 4.64396 0.722022 7.23192 c 0 0 0 0 0 0 0 0 0 13.6816 4.88599 97.2028 9.74026 5.16129 57.9167 4.70588 0 29.6029 11.4713 g 0 0 0 0 0 0 0 0 0 16.1692 4.23453 0 0 59.7849 1.25 1.76471 86.0681 26.7148 11.9701 t 0 0 0 0 0 0 0 0 0 0.995025 0.325733 2.7972 0 31.3978 1.25 81.7647 9.28793 42.9603 69.3267

M08731_2.00_rc_shift9 (TCF12_rc)
; positions_6nt_m5 versus M08731_2.00_rc (TCF12_rc); m=75/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.747881; ---------dsCAGsTGkg ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 29.6 14.2 2.2 84.4 1.4 5.6 1.8 0.4 9.8 1.8 c 0 0 0 0 0 0 0 0 0 12 34 94.8 1.4 12 61 0 0.8 3.2 16 g 0 0 0 0 0 0 0 0 0 26.2 49.4 2.2 0.6 83.8 31.8 1 94 31.8 67.4 t 0 0 0 0 0 0 0 0 0 32.2 2.4 0.8 13.6 2.8 1.6 97.2 4.8 55.2 14.8

M02803_2.00_rc_shift9 (BHLHA15_rc)
; positions_6nt_m5 versus M02803_2.00_rc (BHLHA15_rc); m=76/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.747721; ---------amCATATGGT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 56.2574 28.9022 0.235942 98.0862 0 99.4609 0.0195103 0 0.0394205 10.7224 c 0 0 0 0 0 0 0 0 0 4.32598 58.7111 99.7641 0 0 0.539057 0.877963 0.0589159 4.59249 13.9647 g 0 0 0 0 0 0 0 0 0 23.4726 12.298 0 1.84612 0.665623 0 0.107307 99.6465 70.5233 6.79018 t 0 0 0 0 0 0 0 0 0 15.944 0.0886874 0 0.067659 99.3344 0 98.9952 0.29458 24.8448 68.5227

M04173_2.00_rc_shift9 (OLIG3_rc)
; positions_6nt_m5 versus M04173_2.00_rc (OLIG3_rc); m=77/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.747395; ---------acCATATGkt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 63.9645 12.2694 5.65846 97.0052 0.029036 97.8263 0.882494 0 0.570295 4.44592 c 0 0 0 0 0 0 0 0 0 4.18213 64.2595 94.1934 0.0476872 0.241967 1.74089 1.46763 0 15.3566 24.0067 g 0 0 0 0 0 0 0 0 0 23.7092 22.6055 0.129654 1.5546 1.28726 0.413581 0.0863309 97.676 32.4324 3.85358 t 0 0 0 0 0 0 0 0 0 8.14414 0.865555 0.0185219 1.39247 98.4417 0.0192363 97.5635 2.32402 51.6406 67.6938

M02798_2.00_rc_shift9 (OLIG3_rc)
; positions_6nt_m5 versus M02798_2.00_rc (OLIG3_rc); m=78/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.74614; ---------rvCATATGkT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 57.6807 38.7865 12.5114 87.1643 0 95.1316 1.07527 0.140187 0.281822 4.92905 c 0 0 0 0 0 0 0 0 0 5.3012 34.7158 87.1247 0.0910332 0.542139 3.57675 4.83871 0 9.76984 15.9447 g 0 0 0 0 0 0 0 0 0 29.0361 25.4224 0.181984 10.1957 5.07639 1.2916 0.488759 89.486 52.372 7.61763 t 0 0 0 0 0 0 0 0 0 7.98193 1.07527 0.181984 2.54893 94.3815 0 93.5973 10.3738 37.5763 71.5086

M04175_2.00_shift9 (OLIG3)
; positions_6nt_m5 versus M04175_2.00 (OLIG3); m=79/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.74527; ---------AmCATATGgy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 68.8699 52.6008 1.90493 97.9601 0 99.9815 0.742198 0 0.151383 6.61486 c 0 0 0 0 0 0 0 0 0 4.20677 32.6861 98.0134 0 0.0548847 0.0185065 2.63793 0 22.8472 25.9967 g 0 0 0 0 0 0 0 0 0 22.9269 14.6341 0.0816401 1.74977 1.10684 0 0 94.4245 62.9112 3.28666 t 0 0 0 0 0 0 0 0 0 3.99643 0.0789328 0 0.290118 98.8383 0 96.6199 5.57546 14.0902 64.1018

M03618_2.00_shift9 (M03618_2.00)
; positions_6nt_m5 versus M03618_2.00; m=80/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.744999; ---------AmCATATGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 77.7778 37.3913 0 97.0297 3.92157 98 0 2.9703 0 0 c 0 0 0 0 0 0 0 0 0 0 47.8261 100 1.9802 0 0 2 0 11.7117 40.8163 g 0 0 0 0 0 0 0 0 0 21.2121 14.7826 0 0.990099 0 1 0 97.0297 45.9459 0 t 0 0 0 0 0 0 0 0 0 1.0101 0 0 0 96.0784 1 98 0 42.3423 59.1837

M04199_2.00_rc_shift9 (BHLHE22_rc)
; positions_6nt_m5 versus M04199_2.00_rc (BHLHE22_rc); m=81/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.74433; ---------rmCATATGkT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 59.8308 35.6377 0.0764234 95.7814 0.302058 99.847 0.358102 0 0 4.10105 c 0 0 0 0 0 0 0 0 0 1.65532 45.6913 99.7707 0.330154 1.11384 0.152964 6.08774 0 20.1642 5.67585 g 0 0 0 0 0 0 0 0 0 36.2148 18.288 0.152847 3.8518 0 0 0.0537153 99.5046 42.8871 4.56037 t 0 0 0 0 0 0 0 0 0 2.29906 0.382995 0 0.0366838 98.5841 0 93.5004 0.495427 36.9486 85.6627

M02794_2.00_rc_shift9 (MESP1_rc)
; positions_6nt_m5 versus M02794_2.00_rc (MESP1_rc); m=82/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.741399; ---------mvCAGGTGyd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 26.8293 37.6307 4.79042 88.8545 6.62651 4.21687 0 0 2.09059 29.3706 c 0 0 0 0 0 0 0 0 0 32.4042 25.4355 85.9281 0 4.51807 9.33735 0 0 31.7073 4.8951 g 0 0 0 0 0 0 0 0 0 18.4669 36.5854 9.28144 11.1455 86.4458 86.4458 11.4198 100 19.1638 25.5245 t 0 0 0 0 0 0 0 0 0 22.2997 0.348432 0 0 2.40964 0 88.5802 0 47.0383 40.2098

M08150_2.00_rc_shift9 (MYB_rc)
; positions_6nt_m5 versus M08150_2.00_rc (MYB_rc); m=83/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.740443; ---------kdCAGTTGvk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 23.0517 32.5475 0 91.5521 0 0.392927 0.458415 0.589391 26.85 24.8854 c 0 0 0 0 0 0 0 0 0 14.7348 9.62672 99.2796 4.45318 0 0 2.55403 0.327439 25.9987 19.6464 g 0 0 0 0 0 0 0 0 0 34.5776 31.5652 0.196464 3.92927 100 0.130976 0.196464 99.0832 28.0288 27.6359 t 0 0 0 0 0 0 0 0 0 27.6359 26.2606 0.523903 0.0654879 0 99.4761 96.7911 0 19.1225 27.8324

M04176_2.00_rc_shift9 (OLIG3_rc)
; positions_6nt_m5 versus M04176_2.00_rc (OLIG3_rc); m=84/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.740254; ---------ACCATATGkT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 68.8746 10.8851 2.78212 99.0758 0.0319693 99.488 0 0.125945 0.0273149 3.36571 c 0 0 0 0 0 0 0 0 0 2.17102 69.4904 97.1866 0 0.351662 0.288 0.192555 0 15.0505 24.1247 g 0 0 0 0 0 0 0 0 0 23.5268 19.401 0.0312598 0.669216 0.223785 0.192 0.0320924 97.8904 34.7173 2.28145 t 0 0 0 0 0 0 0 0 0 5.42756 0.223514 0 0.254939 99.3926 0.032 99.7754 1.98363 50.2049 70.2281

M04109_2.00_rc_shift9 (BHLHE23_rc)
; positions_6nt_m5 versus M04109_2.00_rc (BHLHE23_rc); m=85/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.739006; ---------rmCATATGkT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 59.0967 37.1926 0 99.6612 0 99.605 0 0 0 0.805541 c 0 0 0 0 0 0 0 0 0 0.76073 43.7217 100 0.338764 0 0.112858 0.569823 0 24.4862 5.69901 g 0 0 0 0 0 0 0 0 0 39.8463 19.0858 0 0 0.105101 0.282144 0.264848 99.4847 47.8556 0.47429 t 0 0 0 0 0 0 0 0 0 0.296284 0 0 0 99.8949 0 99.1653 0.515298 27.6582 93.0212

M02813_2.00_rc_shift9 (OLIG2_rc)
; positions_6nt_m5 versus M02813_2.00_rc (OLIG2_rc); m=86/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.738605; ---------rmCATATGkT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 64.3343 37.0149 6.728 89.9385 0.241984 100 1.30486 0 0.90549 5.16746 c 0 0 0 0 0 0 0 0 0 2.27909 43.0846 92.5244 0 1.08893 0 3.14353 0.237107 8.03622 13.5407 g 0 0 0 0 0 0 0 0 0 27.549 19.7015 0.172513 8.88765 1.33091 0 0.118624 95.3764 52.575 4.30622 t 0 0 0 0 0 0 0 0 0 5.83766 0.199005 0.575043 1.17384 97.3382 0 95.433 4.38648 38.4833 76.9856

M04226_2.00_shift9 (OLIG2)
; positions_6nt_m5 versus M04226_2.00 (OLIG2); m=87/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.73722; ---------AmCATATGkT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 76.4908 37.531 3.63202 96.1154 0 98.0528 0.972399 0.00747831 0.928586 5.46208 c 0 0 0 0 0 0 0 0 0 5.03175 48.864 96.3381 0.014912 0.870816 1.25504 2.60304 0 12.9534 12.7208 g 0 0 0 0 0 0 0 0 0 13.1846 12.7471 0.0298931 2.56487 1.51446 0.684567 0 96.4029 48.4468 4.35645 t 0 0 0 0 0 0 0 0 0 5.29283 0.857851 0 1.3048 97.6147 0 96.4246 3.58959 37.6712 77.4606

M02806_2.00_rc_shift9 (OLIG1_rc)
; positions_6nt_m5 versus M02806_2.00_rc (OLIG1_rc); m=88/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.736465; ---------AmCATATGkT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 76.194 41.5204 0.645443 96.854 0.0869716 98.7859 0.689002 0 0 1.5342 c 0 0 0 0 0 0 0 0 0 1.71906 40.0983 99.3546 0 0.147852 0.979967 1.19714 0 11.5938 11.4204 g 0 0 0 0 0 0 0 0 0 18.8094 18.276 0 1.48797 0.695773 0.130084 0.00861252 99.5456 36.3525 1.79614 t 0 0 0 0 0 0 0 0 0 3.27759 0.105337 0 1.65802 99.0694 0.104067 98.1052 0.454426 52.0537 85.2492

M01717_2.00_rc_shift10 (M01717_2.00_rc)
; positions_6nt_m5 versus M01717_2.00_rc; m=89/244; ncol2=9; w=0; offset=1; strand=R; shift=10; score=0.73472; ----------mCakmTGdt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 27.3464 9.7576 66.2486 4.32903 29.9713 0.43967 0.0715475 37.8736 11.8253 c 0 0 0 0 0 0 0 0 0 0 42.4609 82.9341 5.60363 20.8081 47.0043 7.23021 0.017122 8.20099 22.8795 g 0 0 0 0 0 0 0 0 0 0 18.1484 3.92767 19.9537 46.7748 21.5471 1.5656 99.7439 27.5019 17.8185 t 0 0 0 0 0 0 0 0 0 0 12.0442 3.38058 8.1941 28.088 1.47733 90.7645 0.167396 26.4235 47.4767

M02812_2.00_rc_shift9 (OLIG2_rc)
; positions_6nt_m5 versus M02812_2.00_rc (OLIG2_rc); m=90/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.73222; ---------amCATATGkT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 65.0081 46.7941 11.7077 90.8636 0 97.7984 1.55734 0 0.319927 5.12722 c 0 0 0 0 0 0 0 0 0 4.74797 32.8554 87.9842 0.181818 0.195503 1.71233 3.96413 0 8.27239 11.0254 g 0 0 0 0 0 0 0 0 0 23.6098 19.7133 0.132042 7.22727 2.10166 0.489237 0.141576 89.8831 47.6234 6.78489 t 0 0 0 0 0 0 0 0 0 6.63415 0.637196 0.176056 1.72727 97.7028 0 94.337 10.1169 43.7843 77.0625

M10282_2.00_rc_shift9 (ZBTB18_rc)
; positions_6nt_m5 versus M10282_2.00_rc (ZBTB18_rc); m=91/244; ncol2=12; w=0; offset=0; strand=R; shift=9; score=0.729212; ---------kCCAGATGTK ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 23 0 100 0 98 0 0 0 0 c 0 0 0 0 0 0 0 0 0 10 74 100 0 2 2 0 0 5 0 g 0 0 0 0 0 0 0 0 0 29 3 0 0 98 0 0 100 0 27 t 0 0 0 0 0 0 0 0 0 61 0 0 0 0 0 100 0 95 73

M04067_2.00_rc_shift9 (TFAP4_rc)
; positions_6nt_m5 versus M04067_2.00_rc (TFAP4_rc); m=92/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.728735; ---------awCAGCTGwt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 54.2395 37.1702 0 99.5464 0 3.25415 0 0 46.8067 6.61126 c 0 0 0 0 0 0 0 0 0 15.9125 11.7135 99.895 0.209351 3.02333 92.8409 0.244755 0 5.52359 22.8561 g 0 0 0 0 0 0 0 0 0 23.8783 5.56683 0.105042 0.209351 93.7562 3.90498 0 100 12.3993 16.6415 t 0 0 0 0 0 0 0 0 0 5.96958 45.5494 0 0.0348918 3.22051 0 99.7552 0 35.2704 53.8912

M04111_2.00_shift9 (BHLHE23)
; positions_6nt_m5 versus M04111_2.00 (BHLHE23); m=93/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.727965; ---------RmCATATGgT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 70.0935 26 0 87.2093 2.94118 95.5414 1.59574 0.625 1.33333 0 c 0 0 0 0 0 0 0 0 0 2.80374 54.6667 100 0 8.82353 0 11.1702 5.625 24.6667 24.0741 g 0 0 0 0 0 0 0 0 0 27.1028 18 0 11.6279 0 3.18471 7.44681 93.75 52.6667 6.48148 t 0 0 0 0 0 0 0 0 0 0 1.33333 0 1.16279 88.2353 1.27389 79.7872 0 21.3333 69.4444

M04224_2.00_shift9 (OLIG2)
; positions_6nt_m5 versus M04224_2.00 (OLIG2); m=94/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.727428; ---------AmCATATGkt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 84.1435 38.6261 2.86364 93.1095 0 98.1459 0.797333 0 0.858704 5.55399 c 0 0 0 0 0 0 0 0 0 6.42407 49.6331 97.0455 0 1.4178 1.16457 6.10322 0.0589188 9.97658 23.7807 g 0 0 0 0 0 0 0 0 0 2.46978 11.3193 0.0909091 6.00378 1.97587 0.689549 0.246448 94.3438 54.9415 4.14435 t 0 0 0 0 0 0 0 0 0 6.96269 0.421546 0 0.886757 96.6063 0 92.853 5.59729 34.2233 66.521

M01746_2.00_rc_shift10 (M01746_2.00_rc)
; positions_6nt_m5 versus M01746_2.00_rc; m=95/244; ncol2=9; w=0; offset=1; strand=R; shift=10; score=0.727371; ----------mCAkmTGKT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 49.7525 0.124378 99.6269 0.124378 62.3134 0.124378 0.124378 0.124378 0.247525 c 0 0 0 0 0 0 0 0 0 0 49.7525 99.6269 0.124378 0.124378 37.4378 0.124378 0.124378 0.124378 25 g 0 0 0 0 0 0 0 0 0 0 0.247525 0.124378 0.124378 37.4378 0.124378 0.124378 99.6269 25 0.247525 t 0 0 0 0 0 0 0 0 0 0 0.247525 0.124378 0.124378 62.3134 0.124378 99.6269 0.124378 74.7512 74.505

M04441_2.00_rc_shift9 (SNAI1_rc)
; positions_6nt_m5 versus M04441_2.00_rc (SNAI1_rc); m=96/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.72563; ---------drCAGGTGyr ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 26.3924 29.1363 2.11947 95.4341 7.8242 0.358441 0.189413 3.36206 6.08683 32.6156 c 0 0 0 0 0 0 0 0 0 15.9486 2.08741 94.9579 1.41847 2.29055 0.0248917 0 0 40.6209 14.8464 g 0 0 0 0 0 0 0 0 0 32.0773 54.1186 1.30685 0.434616 88.5295 99.4773 0.209351 95.1569 19.7051 31.9884 t 0 0 0 0 0 0 0 0 0 25.5817 14.6577 1.61574 2.71277 1.35572 0.139394 99.6012 1.48102 33.5871 20.5496

M02814_2.00_rc_shift9 (M02814_2.00_rc)
; positions_6nt_m5 versus M02814_2.00_rc; m=97/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.724168; ---------rrCAGCTGyt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 54.9724 29.2835 0.660066 98.6842 0.326797 5.17241 4.7619 0.328947 0.292398 4.54545 c 0 0 0 0 0 0 0 0 0 7.73481 4.6729 99.0099 0 0.653595 86.2069 0 0 50.2924 17.8977 g 0 0 0 0 0 0 0 0 0 27.9006 64.1745 0.330033 0 98.0392 6.6092 0 98.6842 11.9883 10.2273 t 0 0 0 0 0 0 0 0 0 9.39227 1.86916 0 1.31579 0.980392 2.01149 95.2381 0.986842 37.4269 67.3295

M04442_2.00_rc_shift9 (SNAI1_rc)
; positions_6nt_m5 versus M04442_2.00_rc (SNAI1_rc); m=98/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.722463; ---------rrCAGGTGyr ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 32.1328 32.3875 0 100 0.408703 0 0 0 2.37716 37.4258 c 0 0 0 0 0 0 0 0 0 14.6578 0 100 0 0 0 0 0 59.4683 13.6551 g 0 0 0 0 0 0 0 0 0 34.8196 58.8029 0 0 99.5913 100 0 100 11.9189 35.0855 t 0 0 0 0 0 0 0 0 0 18.3899 8.80954 0 0 0 0 100 0 26.2356 13.8336

M04395_2.00_rc_shift9 (SNAI2_rc)
; positions_6nt_m5 versus M04395_2.00_rc (SNAI2_rc); m=99/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.720232; ---------rrCAGGTGcr ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 34.6441 46.5531 0 100 3.56037 0 0 0.512821 3.74194 37.6205 c 0 0 0 0 0 0 0 0 0 13.6662 0.264692 100 0 0 0 0 0 59.0645 7.87723 g 0 0 0 0 0 0 0 0 0 34.93 46.0207 0 0 96.3684 100 0 99.1464 13.0474 45.5218 t 0 0 0 0 0 0 0 0 0 16.7598 7.16155 0 0 0.0712074 0 100 0.340819 24.1461 8.98042

M00753_2.00_rc_shift9 (M00753_2.00_rc)
; positions_6nt_m5 versus M00753_2.00_rc; m=100/244; ncol2=9; w=0; offset=0; strand=R; shift=9; score=0.718788; ---------hvCAGGTGy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 26.7667 26.6552 1.21724 97.02 0.509645 9.32009 0.177703 0.508982 6.29823 0 c 0 0 0 0 0 0 0 0 0 26.2367 25.1029 98.1588 0.660286 13.4094 11.2703 3.98428 0.0808352 34.4762 0 g 0 0 0 0 0 0 0 0 0 20.2299 39.3692 0.362978 0.774853 85.2816 78.4273 0.0290818 98.9542 23.3424 0 t 0 0 0 0 0 0 0 0 0 26.7667 8.87274 0.260953 1.54484 0.799282 0.98233 95.8089 0.455963 35.8832 0

M04073_2.00_shift9 (TFAP4)
; positions_6nt_m5 versus M04073_2.00 (TFAP4); m=101/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.718575; ---------awCAGCTGwt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 57.8994 35.6253 0 99.7657 0.0804721 1.41296 0.151515 0.0138026 43.8341 6.85391 c 0 0 0 0 0 0 0 0 0 16.4627 15.6694 99.9172 0.0827016 1.89109 96.4809 0.151515 0.0552105 3.55173 18.9659 g 0 0 0 0 0 0 0 0 0 18.5185 4.573 0.0828272 0.110269 97.0762 1.97281 0 99.9034 16.6005 16.4286 t 0 0 0 0 0 0 0 0 0 7.11943 44.1322 0 0.0413508 0.952253 0.133298 99.697 0.0276052 36.0137 57.7515

M08052_2.00_shift7 (TWIST1,TWIST2)
; positions_6nt_m5 versus M08052_2.00 (TWIST1,TWIST2); m=102/244; ncol2=13; w=-2; offset=-2; strand=D; shift=7; score=0.718236; -------awwCCAGATGTb ; cor=; Ncor= a 0 0 0 0 0 0 0 29.7481 28.436 28.1824 14.5653 1.15773 97.8499 1.30658 90.4129 0.975798 1.25696 5.67286 14.2731 c 0 0 0 0 0 0 0 21.4565 21.1864 15.519 73.0139 97.5963 0.446552 5.03887 5.80517 1.50504 1.32863 9.91234 25.8173 g 0 0 0 0 0 0 0 24.7919 21.1202 20.3594 9.38861 0.551298 0.799383 88.9906 2.99906 0.915155 95.551 13.8707 28.5628 t 0 0 0 0 0 0 0 24.0035 29.2574 35.9391 3.03214 0.694636 0.904129 4.66398 0.782844 96.604 1.86339 70.5441 31.3468

M04166_2.00_rc_shift9 (ATOH1_rc)
; positions_6nt_m5 versus M04166_2.00_rc (ATOH1_rc); m=103/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.71808; ---------RACAGCTGTT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 31.1176 69.0058 0 100 0 11.685 5.26316 0 0 0 c 0 0 0 0 0 0 0 0 0 0 2.55848 100 0 0 88.315 0 0 13.2944 23.2419 g 0 0 0 0 0 0 0 0 0 68.8824 21.6374 0 0 87.0229 0 0 100 13.0752 8.52868 t 0 0 0 0 0 0 0 0 0 0 6.79825 0 0 12.9771 0 94.7368 0 73.6304 68.2294

M04125_2.00_shift9 (ARNTL)
; positions_6nt_m5 versus M04125_2.00 (ARNTL); m=104/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.717357; ---------skCACrTGay ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 23.8982 14.9836 2.81956 90.0483 1.45937 46.3042 3.56159 0 55.861 4.76055 c 0 0 0 0 0 0 0 0 0 25.2609 7.17917 96.5426 0.774093 80.6558 6.47849 5.5675 1.12904 14.8654 54.599 g 0 0 0 0 0 0 0 0 0 32.3936 36.5796 0.130468 6.19951 6.10694 46.1827 1.36416 97.0208 7.52391 10.8641 t 0 0 0 0 0 0 0 0 0 18.4473 41.2576 0.507375 2.97806 11.7779 1.03461 89.5068 1.85017 21.7497 29.7764

M08853_2.00_rc_shift9 (SNAI2_rc)
; positions_6nt_m5 versus M08853_2.00_rc (SNAI2_rc); m=105/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.71723; ---------rrCAGGTGca ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 40 43 0.2 100 0 0 0 0 0.4 37.4 c 0 0 0 0 0 0 0 0 0 7.2 0.4 99.8 0 0 0 0 0 56.2 23.2 g 0 0 0 0 0 0 0 0 0 42.6 56.4 0 0 100 100 0 99.4 21 18.8 t 0 0 0 0 0 0 0 0 0 10.2 0.2 0 0 0 0 100 0.6 22.4 20.6

M04223_2.00_shift9 (OLIG2)
; positions_6nt_m5 versus M04223_2.00 (OLIG2); m=106/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.717185; ---------AACAgmTGTk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 95.1613 83.0986 1.66667 89.3939 0 34.0426 0 0 0 2.29885 c 0 0 0 0 0 0 0 0 0 0 15.493 98.3333 1.51515 15.3061 62.766 7.57576 1.66667 20.2703 19.5402 g 0 0 0 0 0 0 0 0 0 0 0 0 9.09091 60.2041 3.19149 3.0303 98.3333 0 29.8851 t 0 0 0 0 0 0 0 0 0 4.83871 1.40845 0 0 24.4898 0 89.3939 0 79.7297 48.2759

M04159_2.00_shift9 (NPAS2)
; positions_6nt_m5 versus M04159_2.00 (NPAS2); m=107/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.715505; ---------drCrCrTGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 27.8853 53.5539 0 55.9126 0 66.5715 0 0 1.36117 17.3719 c 0 0 0 0 0 0 0 0 0 12.3976 17.1049 98.3405 0 81.4946 0 5.22169 0 16.1601 44.0501 g 0 0 0 0 0 0 0 0 0 27.451 27.0219 0 44.0874 0 33.4285 0 99.8142 28.7074 4.74004 t 0 0 0 0 0 0 0 0 0 32.2661 2.3193 1.65955 0 18.5054 0 94.7783 0.185782 53.7714 33.8379

M04393_2.00_rc_shift9 (SNAI2_rc)
; positions_6nt_m5 versus M04393_2.00_rc (SNAI2_rc); m=108/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.715341; ---------rrCAGGTGcr ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 37.8363 53.9334 0 100 1.10288 0 0 0 2.69082 48.6089 c 0 0 0 0 0 0 0 0 0 13.0222 0.117782 100 0 0 0 0 0 65.6645 9.09527 g 0 0 0 0 0 0 0 0 0 32.4109 38.912 0 0 98.8971 100 0.0501283 100 7.14839 32.754 t 0 0 0 0 0 0 0 0 0 16.7306 7.03681 0 0 0 0 99.9499 0 24.4963 9.54176

M02797_2.00_shift9 (NHLH1)
; positions_6nt_m5 versus M02797_2.00 (NHLH1); m=109/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.712058; ---------mGCAGCTGCg ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 31.6876 12.011 0.0460193 99.632 0 4.41689 0 0 4.81682 3.41959 c 0 0 0 0 0 0 0 0 0 46.0949 3.50034 99.6779 0.183993 5.19698 83.921 0.0460829 0 73.4735 5.57609 g 0 0 0 0 0 0 0 0 0 15.6629 74.3308 0.184077 0.183993 90.7795 11.6621 0.138249 99.8617 6.07191 66.7283 t 0 0 0 0 0 0 0 0 0 6.55459 10.1579 0.0920387 0 4.02347 0 99.8157 0.138313 15.6377 24.276

M04608_2.00_rc_shift9 (SNAI3_rc)
; positions_6nt_m5 versus M04608_2.00_rc (SNAI3_rc); m=110/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.710003; ---------rrCAGGTGyr ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 43.1493 55.3369 0.806723 99.8979 2.20903 0.102145 0.168124 1.9385 2.8208 54.0541 c 0 0 0 0 0 0 0 0 0 12.0654 0.333556 98.6218 0 1.05506 0 0 0 54.0929 5.86092 g 0 0 0 0 0 0 0 0 0 28.8344 42.5284 0.571429 0 96.7359 99.8979 1.17687 98.0615 17.1091 35.044 t 0 0 0 0 0 0 0 0 0 15.9509 1.8012 0 0.102145 0 0 98.655 0 25.9771 5.041

M04151_2.00_rc_shift9 (HAND2_rc)
; positions_6nt_m5 versus M04151_2.00_rc (HAND2_rc); m=111/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.70923; ---------yrCAGGTGTt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 21.0593 25.6044 0.375 97.9038 1.19617 3.63423 0 0 0 6.28183 c 0 0 0 0 0 0 0 0 0 35.6873 12.7473 99.25 0 1.91388 3.28253 0 0.873908 4.21687 5.7725 g 0 0 0 0 0 0 0 0 0 4.91803 61.6484 0.375 1.35635 94.9761 93.0832 3.40633 99.1261 16.0643 20.5433 t 0 0 0 0 0 0 0 0 0 38.3354 0 0 0.739827 1.91388 0 96.5937 0 79.7189 67.4024

M04130_2.00_shift9 (CLOCK)
; positions_6nt_m5 versus M04130_2.00 (CLOCK); m=112/244; ncol2=10; w=0; offset=0; strand=D; shift=9; score=0.706107; ---------drCrCrTGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 28.2472 51.4138 5.62546 56.6138 0 65.8449 0 1.34305 6.28153 19.2984 c 0 0 0 0 0 0 0 0 0 16.3771 11.9079 85.1962 0 81.7689 0 9.59254 1.17038 18.7958 38.977 g 0 0 0 0 0 0 0 0 0 27.5956 30.7287 2.06329 43.3862 0 34.1551 0 88.3346 25.5085 8.25369 t 0 0 0 0 0 0 0 0 0 27.7802 5.94951 7.1151 0 18.2311 0 90.4075 9.15196 49.4142 33.4709

M04444_2.00_rc_shift9 (SNAI1_rc)
; positions_6nt_m5 versus M04444_2.00_rc (SNAI1_rc); m=113/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.705551; ---------rrCAGGTGCr ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 43.5266 39.7461 0 99.954 1.94228 0 0 0.206476 1.78242 42.8155 c 0 0 0 0 0 0 0 0 0 12.6969 0.270699 99.9671 0 0.0805257 0 0 0 69.3091 4.56805 g 0 0 0 0 0 0 0 0 0 27.676 54.8679 0.0263002 0 97.945 100 0 99.6592 9.42949 46.6276 t 0 0 0 0 0 0 0 0 0 16.1005 5.11528 0.00657505 0.0460193 0.0322103 0 100 0.134373 19.479 5.98876

M04607_2.00_rc_shift9 (SNAI3_rc)
; positions_6nt_m5 versus M04607_2.00_rc (SNAI3_rc); m=114/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.705187; ---------arCAGGTGya ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 47.2471 60.9081 0.364732 99.4113 1.83287 0 0 1.4752 3.74285 62.4833 c 0 0 0 0 0 0 0 0 0 10.5794 0 99.0802 0 0.45045 0.287265 0.19084 0 54.1327 9.18558 g 0 0 0 0 0 0 0 0 0 24.4078 36.2463 0 0.540971 97.0488 99.7127 0.445293 98.054 14.7375 20.9479 t 0 0 0 0 0 0 0 0 0 17.7657 2.84559 0.555027 0.0477327 0.667909 0 99.3639 0.47081 27.3869 7.38318

M04150_2.00_rc_shift9 (HAND2_rc)
; positions_6nt_m5 versus M04150_2.00_rc (HAND2_rc); m=115/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.70303; ---------ygCAGGTGTT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 22.8237 21.9831 0 99.4576 0.0977708 1.60651 0 0 0.481888 2.48351 c 0 0 0 0 0 0 0 0 0 29.5496 20.7078 99.4776 0 2.99179 0.119 0.261727 0 5.79927 5.31781 g 0 0 0 0 0 0 0 0 0 5.29186 56.9425 0.522403 0.0401768 96.8127 98.1952 0.0603986 100 11.449 22.7305 t 0 0 0 0 0 0 0 0 0 42.3349 0.366651 0 0.50221 0.0977708 0.0793336 99.6779 0 82.2699 69.4682

M08057_2.00_shift8 (NEUROD1,NEUROD4,NEUROD6)
; positions_6nt_m5 versus M08057_2.00 (NEUROD1,NEUROD4,NEUROD6); m=116/244; ncol2=13; w=-1; offset=-1; strand=D; shift=8; score=0.70224; --------graCAGATGGy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.5837 33.085 56.4855 0.744961 98.2033 0.701139 89.1323 2.41017 0.569676 2.58545 16.3453 c 0 0 0 0 0 0 0 0 18.7993 14.1543 19.8072 98.1595 0.306748 1.05171 6.57318 2.23488 0.306748 4.07537 39.9211 g 0 0 0 0 0 0 0 0 31.8142 39.702 21.6477 0.569676 0.701139 94.3032 3.37423 0.832603 97.7651 85.9772 18.3173 t 0 0 0 0 0 0 0 0 24.8028 13.0587 2.0596 0.525855 0.788782 3.94391 0.920245 94.5223 1.35846 7.36196 25.4163

M04394_2.00_rc_shift9 (SNAI2_rc)
; positions_6nt_m5 versus M04394_2.00_rc (SNAI2_rc); m=117/244; ncol2=10; w=0; offset=0; strand=R; shift=9; score=0.701564; ---------rrCAGGTGCa ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 41.7209 61.9346 0 99.9118 1.92227 0 0 0.413835 2.72069 60.9233 c 0 0 0 0 0 0 0 0 0 10.748 0.435455 100 0.0579491 0 0.0126072 0 0.0376213 68.1978 7.1332 g 0 0 0 0 0 0 0 0 0 34.9952 32.4259 0 0 97.9789 99.9874 0.0378119 99.4583 8.03481 24.5091 t 0 0 0 0 0 0 0 0 0 12.5359 5.20405 0 0.0302343 0.0988313 0 99.9622 0.0902912 21.0467 7.43432

M01742_2.00_shift9 (M01742_2.00)
; positions_6nt_m5 versus M01742_2.00; m=118/244; ncol2=9; w=0; offset=0; strand=D; shift=9; score=0.700416; ---------rACAGcTGw- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 59.7222 88.6062 0.0996016 99.7012 0.110619 22.2345 0.110619 0.110619 39.881 0 c 0 0 0 0 0 0 0 0 0 0.198413 0.110619 99.7012 0.0996016 0.110619 55.4204 0.110619 0.110619 20.0397 0 g 0 0 0 0 0 0 0 0 0 39.881 0.110619 0.0996016 0.0996016 77.5442 0.110619 0.110619 99.6681 0.198413 0 t 0 0 0 0 0 0 0 0 0 0.198413 11.1726 0.0996016 0.0996016 22.2345 22.2345 99.6681 0.110619 39.881 0

M09464_2.00_rc_shift7 (M09464_2.00_rc)
; positions_6nt_m5 versus M09464_2.00_rc; m=119/244; ncol2=12; w=-2; offset=-2; strand=R; shift=7; score=0.698787; -------ryvvCAGcTGby ; cor=; Ncor= a 0 0 0 0 0 0 0 25.9 21.8 28.8 27.1 7.8 84.7 6.2 23.3 10.1 0.2 7.9 20 c 0 0 0 0 0 0 0 22.8 27 31.8 31.5 84.8 0.1 8.5 49.5 6.6 0.1 36.5 27.7 g 0 0 0 0 0 0 0 27.2 25 33.7 32.4 5.9 0.1 69 23.8 6.3 91.8 28.4 20.2 t 0 0 0 0 0 0 0 24.1 26.3 5.7 8.9 1.5 15.1 16.3 3.4 77 7.9 27.2 32.2

M05831_2.00_shift8 (MYF6)
; positions_6nt_m5 versus M05831_2.00 (MYF6); m=120/244; ncol2=11; w=-1; offset=-1; strand=D; shift=8; score=0.695787; --------yaACAgkTGwy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 5.7 66.2 72.5 2.6 87.2 6.6 16.3 2.3 5.6 32.6 11.1 c 0 0 0 0 0 0 0 0 29.5 7.8 13.8 91.2 4.3 7.6 16.7 4.3 2.6 16 31.4 g 0 0 0 0 0 0 0 0 24.6 20.2 8.3 2.3 5.4 63.5 25.7 3.1 89.2 17.2 11.2 t 0 0 0 0 0 0 0 0 40.2 5.9 5.4 3.9 3.1 22.2 41.4 90.3 2.5 34.2 46.3

M01737_2.00_rc_shift10 (M01737_2.00_rc)
; positions_6nt_m5 versus M01737_2.00_rc; m=121/244; ncol2=9; w=0; offset=1; strand=R; shift=10; score=0.692521; ----------mCAssTGkw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 25.0583 1.33844 91.7989 0.838996 4.61796 0.116677 5.98283 17.648 27.2826 c 0 0 0 0 0 0 0 0 0 0 38.1378 98.6426 3.31879 39.8232 31.4989 2.20704 1.40339 21.7719 16.714 g 0 0 0 0 0 0 0 0 0 0 19.3213 0.0150181 4.01325 57.0798 62.7999 0.00063091 88.1371 30.8958 20.6197 t 0 0 0 0 0 0 0 0 0 0 17.4826 0.00389331 0.869011 2.25794 1.08324 97.6757 4.47673 29.6844 35.3836

M04586_2.00_rc_shift7 (ZBTB18_rc)
; positions_6nt_m5 versus M04586_2.00_rc (ZBTB18_rc); m=122/244; ncol2=13; w=-2; offset=-2; strand=R; shift=7; score=0.688795; -------rwkmCAGATGTk ; cor=; Ncor= a 0 0 0 0 0 0 0 34.3956 26.0645 14.4715 25.1261 0.163901 94.1626 0.0758581 68.7615 0.32917 0.13347 2.48315 7.77956 c 0 0 0 0 0 0 0 17.3006 15.3014 10.9865 57.0632 99.6415 0.0290416 7.55737 17.7718 1.26827 0 9.69315 5.33226 g 0 0 0 0 0 0 0 27.4877 22.7866 27.5267 17.5642 0.112682 0.0290416 92.234 6.40464 4.23081 99.8665 1.56084 44.373 t 0 0 0 0 0 0 0 20.8162 35.8475 47.0153 0.246392 0.0819504 5.77928 0.132752 7.06207 94.1717 0 86.2629 42.5152

M09480_2.00_shift7 (M09480_2.00)
; positions_6nt_m5 versus M09480_2.00; m=123/244; ncol2=12; w=-2; offset=-2; strand=D; shift=7; score=0.68765; -------rkrvCAKmTGsy ; cor=; Ncor= a 0 0 0 0 0 0 0 29.6 20.9 48.8 28 0.2 99.5 0.2 38.1 0.2 0.2 0.2 3.6 c 0 0 0 0 0 0 0 23.7 23.7 3.8 42 99.5 0.2 0.2 61.6 0.2 0.2 26.9 46.1 g 0 0 0 0 0 0 0 32.3 27.1 46.8 30 0.2 0.2 71.9 0.2 0.2 99.5 50 5.8 t 0 0 0 0 0 0 0 14.6 28.5 0.8 0.2 0.2 0.2 27.8 0.2 99.5 0.2 23 44.6

M00120_2.00_rc_shift9 (M00120_2.00_rc)
; positions_6nt_m5 versus M00120_2.00_rc; m=124/244; ncol2=9; w=0; offset=0; strand=R; shift=9; score=0.685584; ---------raCAgbtGb- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 44.1097 45.3699 12.6256 99.8705 17.7355 17.1664 12.8869 12.0605 18.6433 0 c 0 0 0 0 0 0 0 0 0 7.21873 14.656 86.9844 0.0312378 17.3843 26.1266 23.2478 5.20667 26.9905 0 g 0 0 0 0 0 0 0 0 0 46.8373 16.5246 0.213467 0.0377743 45.8588 30.0527 10.5509 77.4738 25.4187 0 t 0 0 0 0 0 0 0 0 0 1.83433 23.4495 0.176529 0.0604387 19.0214 26.6544 53.3145 5.25899 28.9475 0

M01497_2.00_shift10 (MAX)
; positions_6nt_m5 versus M01497_2.00 (MAX); m=125/244; ncol2=9; w=0; offset=1; strand=D; shift=10; score=0.68488; ----------sCrCATGsy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 22.8283 14.6848 58.3222 2.97696 76.7166 6.30533 2.69026 18.1899 21.7687 c 0 0 0 0 0 0 0 0 0 0 29.0205 74.9494 4.73974 81.5245 10.4868 16.6331 0.0854039 25.5559 28.8028 g 0 0 0 0 0 0 0 0 0 0 25.9975 4.3354 27.0039 3.89972 12.1839 0.246941 88.2026 33.8137 16.9535 t 0 0 0 0 0 0 0 0 0 0 22.1536 6.0304 9.93419 11.5988 0.612699 76.8146 9.02173 22.4405 32.4751

M04138_2.00_rc_shift10 (TCF12_rc)
; positions_6nt_m5 versus M04138_2.00_rc (TCF12_rc); m=126/244; ncol2=8; w=0; offset=1; strand=R; shift=10; score=0.68223; ----------gCAGRTGy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 23.572 3.52541 100 0 25.5557 0 0 16.6358 0 c 0 0 0 0 0 0 0 0 0 0 14.6699 96.4746 0 4.52956 5.17795 0 0 29.7478 0 g 0 0 0 0 0 0 0 0 0 0 46.9028 0 0 85.2456 69.2663 0 100 21.365 0 t 0 0 0 0 0 0 0 0 0 0 14.8553 0 0 10.2248 0 100 0 32.2515 0

M05985_2.00_rc_shift9 (M05985_2.00_rc)
; positions_6nt_m5 versus M05985_2.00_rc; m=127/244; ncol2=11; w=0; offset=0; strand=R; shift=9; score=0.67976; ---------RmCATATGGT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 31.8182 40.9091 0 90.9091 0 100 0 0 0 13.6364 c 0 0 0 0 0 0 0 0 0 0 45.4545 100 0 0 0 0 0 0 9.09091 g 0 0 0 0 0 0 0 0 0 68.1818 9.09091 0 9.09091 18.1818 0 0 95.4545 95.4545 0 t 0 0 0 0 0 0 0 0 0 0 4.54545 0 0 81.8182 0 100 4.54545 4.54545 77.2727

M04585_2.00_rc_shift7 (ZBTB18_rc)
; positions_6nt_m5 versus M04585_2.00_rc (ZBTB18_rc); m=128/244; ncol2=13; w=-2; offset=-2; strand=R; shift=7; score=0.678001; -------awtCCAGATGTk ; cor=; Ncor= a 0 0 0 0 0 0 0 43.9481 30.5889 8.43771 18.9548 0 98.7795 0 84.4965 0.0401782 0 0.36152 2.79642 c 0 0 0 0 0 0 0 15.0241 11.1765 6.94531 70.8826 99.9555 0.0219909 1.67098 10.7255 0.0511359 0.0148395 6.60377 2.5224 g 0 0 0 0 0 0 0 24.1002 19.0005 22.4506 10.1205 0.0370879 0.0073303 98.329 2.45799 1.46833 99.9852 0.241014 46.3587 t 0 0 0 0 0 0 0 16.9276 39.2342 62.1664 0.0420809 0.00741757 1.19117 0 2.32004 98.4404 0 92.7937 48.3225

M00118_2.00_rc_shift10 (M00118_2.00_rc)
; positions_6nt_m5 versus M00118_2.00_rc; m=129/244; ncol2=8; w=0; offset=1; strand=R; shift=10; score=0.676829; ----------vCAGgTGb- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 25.8484 2.13367 93.9038 0.688338 20.3145 0.42431 0.330192 11.7426 0 c 0 0 0 0 0 0 0 0 0 0 29.7327 97.3045 3.16537 18.6627 13.8923 0.692607 0.0974827 31.9197 0 g 0 0 0 0 0 0 0 0 0 0 32.209 0.300546 1.75465 80.3606 65.4532 0.121567 98.6837 25.3613 0 t 0 0 0 0 0 0 0 0 0 0 12.2099 0.261282 1.17618 0.28838 0.340049 98.7615 0.888625 30.9764 0

M08061_2.00_shift9 (M08061_2.00)
; positions_6nt_m5 versus M08061_2.00; m=130/244; ncol2=11; w=0; offset=0; strand=D; shift=9; score=0.676461; ---------rrCAGCTGsd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 40.4939 59.7851 0 100 0 0.346146 0 0 14.6311 27.6038 c 0 0 0 0 0 0 0 0 0 14.8274 1.71006 100 0 0 84.0101 0 0 44.038 19.4462 g 0 0 0 0 0 0 0 0 0 44.6787 38.5049 0 0 100 15.6437 0 100 30.3833 26.6997 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 10.9475 26.2503

M08062_2.00_shift9 (M08062_2.00)
; positions_6nt_m5 versus M08062_2.00; m=131/244; ncol2=11; w=0; offset=0; strand=D; shift=9; score=0.674718; ---------rRCAGCTGsw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 47.848 68.3986 0 100 0.0620396 1.42691 0 0 14.5405 30.3373 c 0 0 0 0 0 0 0 0 0 12.2916 0.961613 100 0 0 83.924 0 0 42.8616 18.7359 g 0 0 0 0 0 0 0 0 0 39.7286 30.6398 0 0 99.938 14.6491 0 100 29.5541 22.6832 t 0 0 0 0 0 0 0 0 0 0.131834 0 0 0 0 0 100 0 13.0438 28.2435

M02917_2.00_rc_shift7 (ZBTB18_rc)
; positions_6nt_m5 versus M02917_2.00_rc (ZBTB18_rc); m=132/244; ncol2=13; w=-2; offset=-2; strand=R; shift=7; score=0.674368; -------hatCCAGATGTk ; cor=; Ncor= a 0 0 0 0 0 0 0 26.0478 51.6714 5.35097 18.7977 0.153262 98.2464 0.0215455 89.3873 0.101501 0.0219378 0.3412 1.49392 c 0 0 0 0 0 0 0 30.6342 5.50801 8.80615 71.0241 99.7665 0.035935 1.75955 6.85281 0.108751 0.00731261 2.23202 1.25916 g 0 0 0 0 0 0 0 18.2796 18.5429 23.6952 9.86647 0.0218946 0.237171 98.1758 1.81783 0.681505 99.9634 0.2559 39.3398 t 0 0 0 0 0 0 0 25.0384 24.2777 62.1477 0.311737 0.0583856 1.48052 0.0430911 1.94206 99.1082 0.00731261 97.1709 57.9071

M01749_2.00_rc_shift10 (M01749_2.00_rc)
; positions_6nt_m5 versus M01749_2.00_rc; m=133/244; ncol2=8; w=0; offset=1; strand=R; shift=10; score=0.672593; ----------sCATATGt- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 14.3162 0.0499002 99.8503 0.0499002 79.8902 0.0499002 0.0499002 0.0766871 0 c 0 0 0 0 0 0 0 0 0 0 57.0513 99.8503 0.0499002 0.0499002 20.01 0.0499002 0.0499002 23.0828 0 g 0 0 0 0 0 0 0 0 0 0 28.5613 0.0499002 0.0499002 20.01 0.0499002 0.0499002 99.8503 15.4141 0 t 0 0 0 0 0 0 0 0 0 0 0.0712251 0.0499002 0.0499002 79.8902 0.0499002 99.8503 0.0499002 61.4264 0

M08080_2.00_rc_shift8 (ZEB1_rc)
; positions_6nt_m5 versus M08080_2.00_rc (ZEB1_rc); m=134/244; ncol2=11; w=-1; offset=-1; strand=R; shift=8; score=0.671259; --------sssCAGGTGss ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.1564 15.664 16.9308 0.640866 95.7276 0.149039 0.606091 0 3.28879 23.4239 18.3417 c 0 0 0 0 0 0 0 0 28.9533 32.7935 25.7241 96.284 1.76362 3.2242 0.481892 1.10785 0.784937 25.729 25.9725 g 0 0 0 0 0 0 0 0 34.5521 30.389 47.4986 0.884296 2.48895 95.6679 98.753 0 95.3599 27.5722 39.7337 t 0 0 0 0 0 0 0 0 17.3382 21.1536 9.84649 2.19087 0.0198718 0.958816 0.158975 98.8872 0.566347 23.2749 15.9521

M04183_2.00_shift8 (MSC)
; positions_6nt_m5 versus M04183_2.00 (MSC); m=135/244; ncol2=12; w=-1; offset=-1; strand=D; shift=8; score=0.670956; --------yrmCAGmTGty ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.5311 55 56.1828 0 95.4338 3.83142 25.6494 0 3.24074 0.251256 9.42623 c 0 0 0 0 0 0 0 0 35.8852 8.75 25.2688 95.8716 2.28311 2.68199 67.8571 1.41509 0 24.1206 34.0164 g 0 0 0 0 0 0 0 0 16.7464 32.0833 15.3226 0 0 80.0766 4.54545 0 96.7593 23.1156 4.91803 t 0 0 0 0 0 0 0 0 25.8373 4.16667 3.22581 4.12844 2.28311 13.41 1.94805 98.5849 0 52.5126 51.6393

M01723_2.00_rc_shift10 (M01723_2.00_rc)
; positions_6nt_m5 versus M01723_2.00_rc; m=136/244; ncol2=10; w=0; offset=1; strand=R; shift=10; score=0.670541; ----------sCAGGTGyk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 24.3429 6.56145 89.9229 6.41956 17.014 4.88691 6.69592 9.15354 21.8368 c 0 0 0 0 0 0 0 0 0 0 30.638 91.947 3.06165 21.1016 14.644 2.68199 1.12919 31.6311 20.9806 g 0 0 0 0 0 0 0 0 0 0 33.8602 0.853177 3.34997 70.7639 68.3085 0.910793 89.2551 23.9063 25.8833 t 0 0 0 0 0 0 0 0 0 0 11.1589 0.638401 3.66546 1.71489 0.0335082 91.5203 2.91975 35.3091 31.2993

M05990_2.00_shift9 (M05990_2.00)
; positions_6nt_m5 versus M05990_2.00; m=137/244; ncol2=11; w=0; offset=0; strand=D; shift=9; score=0.669209; ---------mvCAsmTGwC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 47.8261 47.8261 0 100 0 26.087 0 0 34.7826 0 c 0 0 0 0 0 0 0 0 0 26.087 26.087 100 0 65.2174 60.8696 0 0 13.0435 73.913 g 0 0 0 0 0 0 0 0 0 4.34783 26.087 0 0 34.7826 13.0435 0 100 8.69565 13.0435 t 0 0 0 0 0 0 0 0 0 21.7391 0 0 0 0 0 100 0 43.4783 13.0435

M09657_2.00_rc_shift7 (TWIST2_rc)
; positions_6nt_m5 versus M09657_2.00_rc (TWIST2_rc); m=138/244; ncol2=12; w=-2; offset=-2; strand=R; shift=7; score=0.668336; -------yyvrCAyaTGTT ; cor=; Ncor= a 0 0 0 0 0 0 0 18.5 0 27.0833 31.6667 0 88 0 63.25 0 4.58333 3.83333 6.83333 c 0 0 0 0 0 0 0 36.1667 41.5 35.0833 19.75 100 3.33333 34.5 18.1667 3.83333 0 0.5 11.0833 g 0 0 0 0 0 0 0 11.8333 20.5 34.3333 44.25 0 8.66667 22.1667 14.25 0 90.5833 16.1667 8.58333 t 0 0 0 0 0 0 0 33.5 38 3.5 4.33333 0 0 43.3333 4.33333 96.1667 4.83333 79.5 73.5

M09407_2.00_shift8 (M09407_2.00)
; positions_6nt_m5 versus M09407_2.00; m=139/244; ncol2=11; w=-1; offset=-1; strand=D; shift=8; score=0.668034; --------cwGCAGsTGks ; cor=; Ncor= a 0 0 0 0 0 0 0 0 23.2 27.8 9.6 0.2 99.6 0 1.6 0.6 0 0.4 3.2 c 0 0 0 0 0 0 0 0 41 5.6 15 98.4 0.2 20.2 65.4 0 0.6 17 25.2 g 0 0 0 0 0 0 0 0 23.2 16 74.8 0.6 0.2 79.4 32.6 0 98 32.4 49.4 t 0 0 0 0 0 0 0 0 12.6 50.6 0.6 0.8 0 0.4 0.4 99.4 1.4 50.2 22.2

M08710_2.00_rc_shift8 (TCF3_rc)
; positions_6nt_m5 versus M08710_2.00_rc (TCF3_rc); m=140/244; ncol2=11; w=-1; offset=-1; strand=R; shift=8; score=0.668034; --------cwGCAGsTGks ; cor=; Ncor= a 0 0 0 0 0 0 0 0 23.2 27.8 9.6 0.2 99.6 0 1.6 0.6 0 0.4 3.2 c 0 0 0 0 0 0 0 0 41 5.6 15 98.4 0.2 20.2 65.4 0 0.6 17 25.2 g 0 0 0 0 0 0 0 0 23.2 16 74.8 0.6 0.2 79.4 32.6 0 98 32.4 49.4 t 0 0 0 0 0 0 0 0 12.6 50.6 0.6 0.8 0 0.4 0.4 99.4 1.4 50.2 22.2

M04215_2.00_rc_shift10 (TCF4_rc)
; positions_6nt_m5 versus M04215_2.00_rc (TCF4_rc); m=141/244; ncol2=8; w=0; offset=1; strand=R; shift=10; score=0.666805; ----------rCAGGTGy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 25.5751 0 100 0 18.3384 0 0 11.0966 0 c 0 0 0 0 0 0 0 0 0 0 18.4861 100 0 1.72533 7.7096 0 0 35.0603 0 g 0 0 0 0 0 0 0 0 0 0 42.5557 0 0 93.1711 73.952 0 100 23.7516 0 t 0 0 0 0 0 0 0 0 0 0 13.383 0 0 5.10355 0 100 0 30.0915 0

M08744_2.00_shift9 (M08744_2.00)
; positions_6nt_m5 versus M08744_2.00; m=142/244; ncol2=9; w=0; offset=0; strand=D; shift=9; score=0.666203; ---------rGCAGsTGb- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 59.519 11.2224 2.40481 99.1984 0.400802 5.41082 0.601202 0.400802 4.60922 0 c 0 0 0 0 0 0 0 0 0 0.801603 1.40281 96.3928 0 0.200401 58.7174 0.200401 0.400802 33.8677 0 g 0 0 0 0 0 0 0 0 0 29.4589 86.7735 1.002 0.400802 97.996 35.2705 0.601202 98.998 35.2705 0 t 0 0 0 0 0 0 0 0 0 10.2204 0.601202 0.200401 0.400802 1.40281 0.601202 98.5972 0.200401 26.2525 0

M04205_2.00_rc_shift10 (FIGLA_rc)
; positions_6nt_m5 versus M04205_2.00_rc (FIGLA_rc); m=143/244; ncol2=9; w=0; offset=1; strand=R; shift=10; score=0.665704; ----------vCAGGTGkk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 38.8604 0 100 0 0 0 0 5.42611 22.6781 c 0 0 0 0 0 0 0 0 0 0 30.2691 100 0 0.434947 0.158028 0 0 11.1055 9.87654 g 0 0 0 0 0 0 0 0 0 0 25.2168 0 0 99.5651 99.842 0 100 55.0905 29.1548 t 0 0 0 0 0 0 0 0 0 0 5.65369 0 0 0 0 100 0 28.3779 38.2906

M02916_2.00_rc_shift7 (ZBTB18_rc)
; positions_6nt_m5 versus M02916_2.00_rc (ZBTB18_rc); m=144/244; ncol2=13; w=-2; offset=-2; strand=R; shift=7; score= 0.6642; -------awTCCAGATGTk ; cor=; Ncor= a 0 0 0 0 0 0 0 38.0319 53.5904 3.84977 13.5593 0.788436 100 0.13089 94.3538 0 0 0 0.529101 c 0 0 0 0 0 0 0 24.4681 5.71809 6.76056 79.661 98.8173 0 1.43979 4.51694 0 0 1.44168 0.132275 g 0 0 0 0 0 0 0 18.75 10.2394 18.7793 6.35593 0.394218 0 98.4293 0.752823 0.132802 99.8672 0 41.4021 t 0 0 0 0 0 0 0 18.75 30.4521 70.6103 0.423729 0 0 0 0.376412 99.8672 0.132802 98.5583 57.9365

M04206_2.00_rc_shift10 (FIGLA_rc)
; positions_6nt_m5 versus M04206_2.00_rc (FIGLA_rc); m=145/244; ncol2=9; w=0; offset=1; strand=R; shift=10; score=0.663686; ----------mCAGGTGkw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 45.5955 0 99.9646 0 0 0 0 9.41652 26.5214 c 0 0 0 0 0 0 0 0 0 0 41.9372 100 0 0 0 0 0 13.2722 11.3872 g 0 0 0 0 0 0 0 0 0 0 8.94637 0 0 100 100 0 100 43.7372 16.0023 t 0 0 0 0 0 0 0 0 0 0 3.52097 0 0.0354202 0 0 100 0 33.5742 46.0891

M05937_2.00_shift8 (M05937_2.00)
; positions_6nt_m5 versus M05937_2.00; m=146/244; ncol2=11; w=-1; offset=-1; strand=D; shift=8; score=0.660607; --------ramCAGCTGAy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 41.1765 66.6667 38.8889 0 100 0 22.2222 0 0 88.8889 0 c 0 0 0 0 0 0 0 0 17.6471 11.1111 38.8889 100 0 0 77.7778 0 0 0 38.8889 g 0 0 0 0 0 0 0 0 41.1765 5.55556 5.55556 0 0 83.3333 0 0 100 11.1111 5.55556 t 0 0 0 0 0 0 0 0 0 16.6667 16.6667 0 0 16.6667 0 100 0 0 55.5556

M04089_2.00_rc_shift8 (TFEB_rc)
; positions_6nt_m5 versus M04089_2.00_rc (TFEB_rc); m=147/244; ncol2=11; w=-1; offset=-1; strand=R; shift=8; score=0.659215; --------rgTCACATGkt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.9279 24.3703 0 0 100 0 88.6044 0.0312061 0 16.8878 9.15727 c 0 0 0 0 0 0 0 0 17.3899 11.3341 0 99.8753 0 94.4289 0 0 0 21.4609 24.5853 g 0 0 0 0 0 0 0 0 31.0958 64.2956 0 0.124708 0 0 11.3956 0 100 30.7632 19.9845 t 0 0 0 0 0 0 0 0 24.5863 0 100 0 0 5.57111 0 99.9688 0 30.8881 46.2729

M05967_2.00_rc_shift10 (M05967_2.00_rc)
; positions_6nt_m5 versus M05967_2.00_rc; m=148/244; ncol2=10; w=0; offset=1; strand=R; shift=10; score=0.657655; ----------SCAkATGTC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 92.8571 7.14286 78.5714 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 75 100 0 21.4286 21.4286 0 0 0 78.5714 g 0 0 0 0 0 0 0 0 0 0 25 0 7.14286 35.7143 0 0 100 7.14286 7.14286 t 0 0 0 0 0 0 0 0 0 0 0 0 0 35.7143 0 100 0 92.8571 14.2857

M08775_2.00_rc_shift10 (M08775_2.00_rc)
; positions_6nt_m5 versus M08775_2.00_rc; m=149/244; ncol2=9; w=0; offset=1; strand=R; shift=10; score=0.657246; ----------vCAGGTGyr ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 33.2041 0 100 0 0 0 0 2.49199 37.2957 c 0 0 0 0 0 0 0 0 0 0 34.2686 100 0 0 0 0 0 65.935 8.0382 g 0 0 0 0 0 0 0 0 0 0 32.4113 0 0 100 100 0.11602 100 0 34.674 t 0 0 0 0 0 0 0 0 0 0 0.11602 0 0 0 0 99.884 0 31.573 19.9921

M04185_2.00_shift8 (MSC)
; positions_6nt_m5 versus M04185_2.00 (MSC); m=150/244; ncol2=12; w=-1; offset=-1; strand=D; shift=8; score=0.654407; --------yrmCAGCTGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 17.9743 55.4147 49.8223 0 95.3741 1.54015 17.6149 2.16216 0 0.431965 5.1168 c 0 0 0 0 0 0 0 0 28.5307 14.2857 27.8607 99.4326 0 8.36084 76.6958 2.43243 0 22.3902 29.366 g 0 0 0 0 0 0 0 0 21.826 25.4608 20.7534 0.567376 3.12925 77.1177 5.68928 0.675676 100 26.7099 16.9077 t 0 0 0 0 0 0 0 0 31.669 4.83871 1.56361 0 1.4966 12.9813 0 94.7297 0 50.468 48.6096

M04079_2.00_rc_shift8 (TFEC_rc)
; positions_6nt_m5 versus M04079_2.00_rc (TFEC_rc); m=151/244; ncol2=11; w=-1; offset=-1; strand=R; shift=8; score=0.652298; --------ggTCACATGry ; cor=; Ncor= a 0 0 0 0 0 0 0 0 23.5052 21.8907 0 0 97.7207 0 78.8277 4.02558 0 27.9694 9.64224 c 0 0 0 0 0 0 0 0 18.9375 14.4821 0.829795 100 2.27926 86.8869 0 0 0 14.5041 25.5619 g 0 0 0 0 0 0 0 0 37.0712 63.6272 0.71401 0 0 0 21.1723 0 100 33.6927 22.503 t 0 0 0 0 0 0 0 0 20.4862 0 98.4562 0 0 13.1131 0 95.9744 0 23.8338 42.2929

M08973_2.00_rc_shift9 (M08973_2.00_rc)
; positions_6nt_m5 versus M08973_2.00_rc; m=152/244; ncol2=11; w=0; offset=0; strand=R; shift=9; score=0.652073; ---------rrCAGGTGca ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 41.2955 47.7733 0 100 0.202429 0.202429 0.202429 0 2.63158 35.6275 c 0 0 0 0 0 0 0 0 0 6.68016 0 99.7976 0 0 0 0 0 60.5263 23.8866 g 0 0 0 0 0 0 0 0 0 42.3077 51.6194 0 0 99.7976 99.7976 0 99.5951 15.3846 20.8502 t 0 0 0 0 0 0 0 0 0 9.7166 0.607287 0.202429 0 0 0 99.7976 0.404858 21.4575 19.6356

M04059_2.00_shift8 (TFE3)
; positions_6nt_m5 versus M04059_2.00 (TFE3); m=153/244; ncol2=11; w=-1; offset=-1; strand=D; shift=8; score=0.651921; --------sGTCACATGby ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.453 24.568 0 0 100 0 92.5243 0 0 6.84671 11.1804 c 0 0 0 0 0 0 0 0 27.558 6.3246 0 100 0 100 0 0 0 34.671 35.2558 g 0 0 0 0 0 0 0 0 27.3678 69.1074 0 0 0 0 7.47575 0 100 32.8452 14.3262 t 0 0 0 0 0 0 0 0 23.6211 0 100 0 0 0 0 100 0 25.6371 39.2376

M04184_2.00_shift8 (MSC)
; positions_6nt_m5 versus M04184_2.00 (MSC); m=154/244; ncol2=12; w=-1; offset=-1; strand=D; shift=8; score=0.650805; --------brmCAtaTGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 14.3975 52.9909 26.7606 8.41552 76.4354 1.35747 65.3374 2.11443 2.12483 5.47731 9.15982 c 0 0 0 0 0 0 0 0 29.9687 7.41222 47.4178 84.0237 0 18.8034 16.5133 18.408 2.39044 19.4053 32.3437 g 0 0 0 0 0 0 0 0 25.7433 30.104 17.2926 5.32544 17.8828 15.5857 17.638 0 84.8606 47.1049 10.1074 t 0 0 0 0 0 0 0 0 29.8905 9.49285 8.52895 2.23537 5.68182 64.2534 0.511247 79.4776 10.6242 28.0125 48.3891

M04188_2.00_shift8 (MSC)
; positions_6nt_m5 versus M04188_2.00 (MSC); m=155/244; ncol2=12; w=-1; offset=-1; strand=D; shift=8; score=0.648331; --------yrmCATATGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 12.4327 52.8127 26.9144 0.736932 86.8235 0 86.3936 0 0 2.70927 9.14722 c 0 0 0 0 0 0 0 0 38.9651 7.0508 58.4997 98.6975 0 7.00247 9.13591 11.5904 1.22972 15.1441 33.6502 g 0 0 0 0 0 0 0 0 19.2568 34.511 13.1967 0.565553 13.1765 9.15708 4.47045 0 98.3604 55.158 7.90838 t 0 0 0 0 0 0 0 0 29.3454 5.62547 1.38913 0 0 83.8404 0 88.4096 0.409906 26.9885 49.2942

M04083_2.00_shift8 (MLX)
; positions_6nt_m5 versus M04083_2.00 (MLX); m=156/244; ncol2=11; w=-1; offset=-1; strand=D; shift=8; score=0.645046; --------grtCACrTGkr ; cor=; Ncor= a 0 0 0 0 0 0 0 0 17.5136 36.8468 9.67329 0 98.7967 0 47.514 0 0 5.2079 43.0911 c 0 0 0 0 0 0 0 0 21.6296 11.9023 14.0615 100 0 92.2511 0.936135 4.93112 0 20.2436 12.6417 g 0 0 0 0 0 0 0 0 37.5892 33.664 20.3555 0 1.20332 0 51.5498 0 100 43.3221 32.0874 t 0 0 0 0 0 0 0 0 23.2675 17.587 55.9097 0 0 7.74893 0 95.0689 0 31.2264 12.1798

M04145_2.00_shift8 (MSGN1)
; positions_6nt_m5 versus M04145_2.00 (MSGN1); m=157/244; ncol2=12; w=-1; offset=-1; strand=D; shift=8; score=0.641591; --------brmCAwwTGgy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.5872 41.483 45.3418 0 96.9652 36.365 58.411 1.1025 0 10.186 5.65376 c 0 0 0 0 0 0 0 0 26.2157 14.06 34.785 100 0 8.47332 1.74943 3.93864 0 18.612 42.9803 g 0 0 0 0 0 0 0 0 26.4008 37.427 12.3837 0 3.03475 3.56694 7.44843 0 99.7148 62.6337 7.52374 t 0 0 0 0 0 0 0 0 26.7962 7.03001 7.48955 0 0 51.5948 32.3911 94.9589 0.285235 8.56827 43.8422

M07806_2.00_rc_shift10 (TCF12_rc)
; positions_6nt_m5 versus M07806_2.00_rc (TCF12_rc); m=158/244; ncol2=8; w=0; offset=1; strand=R; shift=10; score=0.639933; ----------sCAGGTGy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 19.5804 0 94.8718 0 8.1585 0 0 2.7972 0 c 0 0 0 0 0 0 0 0 0 0 50.1166 100 0 0 21.9114 0 0 34.2657 0 g 0 0 0 0 0 0 0 0 0 0 27.972 0 0 100 69.9301 0 100 18.648 0 t 0 0 0 0 0 0 0 0 0 0 2.331 0 5.1282 0 0 100 0 44.289 0

M09470_2.00_rc_shift10 (M09470_2.00_rc)
; positions_6nt_m5 versus M09470_2.00_rc; m=159/244; ncol2=10; w=0; offset=1; strand=R; shift=10; score=0.636669; ----------rCAGCTGyt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 46.7 0.1 99.7 0.1 2.9 0.1 0.1 3.2 12.3 c 0 0 0 0 0 0 0 0 0 0 23.5 99.7 0.1 24.1 72.6 0.1 0.1 25.6 23.1 g 0 0 0 0 0 0 0 0 0 0 27.5 0.1 0.1 72.7 24.4 0.1 99.7 24.8 24.2 t 0 0 0 0 0 0 0 0 0 0 2.2 0.1 0.1 3.1 0.1 99.7 0.1 46.5 40.4

M09466_2.00_shift10 (M09466_2.00)
; positions_6nt_m5 versus M09466_2.00; m=160/244; ncol2=10; w=0; offset=1; strand=D; shift=10; score=0.634099; ----------rCAGCTGyb ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 33.9 0.1 99.7 0.1 0.8 0.1 0.1 0.1 16.1 c 0 0 0 0 0 0 0 0 0 0 17.8 99.7 0.1 12.7 75.3 0.1 0.1 35.3 25.3 g 0 0 0 0 0 0 0 0 0 0 47.6 0.1 0.1 87.1 23.8 0.1 99.7 21.8 29.4 t 0 0 0 0 0 0 0 0 0 0 0.7 0.1 0.1 0.1 0.1 99.7 0.1 42.8 29.2

M04137_2.00_rc_shift10 (TCF12_rc)
; positions_6nt_m5 versus M04137_2.00_rc (TCF12_rc); m=161/244; ncol2=8; w=0; offset=1; strand=R; shift=10; score=0.633888; ----------gCAsGTGb- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 22.4971 2.26478 100 0 14.922 0 0 11.2287 0 c 0 0 0 0 0 0 0 0 0 0 14.1447 97.7352 0 32.8689 6.04793 0 0 33.4859 0 g 0 0 0 0 0 0 0 0 0 0 51.5589 0 0 62.6366 79.0301 0 100 25.5185 0 t 0 0 0 0 0 0 0 0 0 0 11.7992 0 0 4.49454 0 100 0 29.7668 0

M02873_2.00_rc_shift9 (SNAI2_rc)
; positions_6nt_m5 versus M02873_2.00_rc (SNAI2_rc); m=162/244; ncol2=9; w=0; offset=0; strand=R; shift=9; score=0.633439; ---------rrCAGGTGy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 34.3086 43.1476 4.20216 94.7404 12.2184 0.324087 0.0512185 10.4152 8.90467 0 c 0 0 0 0 0 0 0 0 0 14.2231 3.6015 90.331 1.63283 1.10306 0 0.471749 3.65439 33.9313 0 g 0 0 0 0 0 0 0 0 0 31.8372 40.685 2.18512 0.670934 83.7552 99.3859 0 72.0503 22.8849 0 t 0 0 0 0 0 0 0 0 0 19.6311 12.5659 3.28177 2.95588 2.92333 0.289972 99.477 13.8802 34.2791 0

M08772_2.00_shift7 (M08772_2.00)
; positions_6nt_m5 versus M08772_2.00; m=163/244; ncol2=12; w=-2; offset=-2; strand=D; shift=7; score=0.63157; -------rgrmCAAATGGy ; cor=; Ncor= a 0 0 0 0 0 0 0 31 22.8 48.8 48.8 0 100 79 97.6 6.8 0 0.2 6 c 0 0 0 0 0 0 0 12.6 13.2 3 36.4 100 0 0 1.6 0.6 0 2.6 42.2 g 0 0 0 0 0 0 0 39 48.8 47.8 14.2 0 0 15.2 0.8 0.8 99.2 94 9.6 t 0 0 0 0 0 0 0 17.4 15.2 0.4 0.6 0 0 5.8 0 91.8 0.8 3.2 42.2

M09471_2.00_shift9 (TAL2)
; positions_6nt_m5 versus M09471_2.00 (TAL2); m=164/244; ncol2=8; w=0; offset=0; strand=D; shift=9; score=0.63153; ---------arCaGmTG-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 43.5 26.1 1.1 67.2 1 25.8 23 3.7 0 0 c 0 0 0 0 0 0 0 0 0 17.8 23.9 98.3 4.7 3.9 66 3.5 0.5 0 0 g 0 0 0 0 0 0 0 0 0 19.9 37.9 0.3 4.4 70.4 7.8 0.8 76.5 0 0 t 0 0 0 0 0 0 0 0 0 18.8 12.1 0.3 23.7 24.7 0.4 72.7 19.3 0 0

M04144_2.00_shift8 (MSGN1)
; positions_6nt_m5 versus M04144_2.00 (MSGN1); m=165/244; ncol2=12; w=-1; offset=-1; strand=D; shift=8; score=0.631104; --------srmCAwwTGGy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.2688 36.9964 41.2909 0 95.3043 35.3396 55.5321 0 0 7.744 5.54574 c 0 0 0 0 0 0 0 0 27.946 17.9142 39.2068 99.8433 0.254225 11.0343 1.57458 5.5432 0.266041 17.2053 44.5426 g 0 0 0 0 0 0 0 0 31.0058 38.9631 14.2983 0.156666 4.29191 2.57557 8.81485 0 99.734 67.9787 7.82928 t 0 0 0 0 0 0 0 0 21.7794 6.12634 5.20399 0 0.149544 51.0506 34.0784 94.4568 0 7.072 42.0824

M05968_2.00_shift7 (M05968_2.00)
; positions_6nt_m5 versus M05968_2.00; m=166/244; ncol2=11; w=-2; offset=-2; strand=D; shift=7; score=0.629919; -------rtrACAkATGk- ; cor=; Ncor= a 0 0 0 0 0 0 0 35.2941 0 41.1765 70.5882 0 100 0 70.5882 0 0 0 0 c 0 0 0 0 0 0 0 0 23.5294 0 17.6471 100 0 0 17.6471 0 0 13.3333 0 g 0 0 0 0 0 0 0 64.7059 17.6471 58.8235 11.7647 0 0 35.2941 11.7647 0 100 53.3333 0 t 0 0 0 0 0 0 0 0 58.8235 0 0 0 0 64.7059 0 100 0 33.3333 0

M04190_2.00_shift8 (MSC)
; positions_6nt_m5 versus M04190_2.00 (MSC); m=167/244; ncol2=12; w=-1; offset=-1; strand=D; shift=8; score=0.626632; --------yrmCATATGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 9.90342 58.7564 25.0919 0 100 0 99.1254 0 0 0.211534 4.49611 c 0 0 0 0 0 0 0 0 44.7407 1.72721 64.3314 100 0 0 0.874628 0.0361714 0.0389527 10.2037 35.9376 g 0 0 0 0 0 0 0 0 18.0227 35.2638 10.5183 0 0 1.54828 0 0 99.961 63.6579 1.75356 t 0 0 0 0 0 0 0 0 27.3332 4.25259 0.0584502 0 0 98.4517 0 99.9638 0 25.9269 57.8127

M10091_2.00_rc_shift8 (ZEB1_rc)
; positions_6nt_m5 versus M10091_2.00_rc (ZEB1_rc); m=168/244; ncol2=12; w=-1; offset=-1; strand=R; shift=8; score=0.625209; --------gcmCAGGTGyr ; cor=; Ncor= a 0 0 0 0 0 0 0 0 8.33333 25 50 0 100 0 8.33333 0 0 0 41.6667 c 0 0 0 0 0 0 0 0 16.6667 41.6667 41.6667 100 0 8.33333 0 0 0 58.3333 16.6667 g 0 0 0 0 0 0 0 0 50 8.33333 8.33333 0 0 91.6667 91.6667 0 100 0 33.3333 t 0 0 0 0 0 0 0 0 25 25 0 0 0 0 0 100 0 41.6667 8.33333

M04122_2.00_rc_shift8 (MYOD1_rc)
; positions_6nt_m5 versus M04122_2.00_rc (MYOD1_rc); m=169/244; ncol2=12; w=-1; offset=-1; strand=R; shift=8; score=0.624245; --------yraCAgcTGtT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11.5464 46.5682 56.4446 0 97.9303 10.5155 10.4693 1.51362 0.205656 2.71539 2.89193 c 0 0 0 0 0 0 0 0 36.1856 5.95806 16.6133 100 0 16.5464 58.5869 0.554995 0 15.4878 9.01826 g 0 0 0 0 0 0 0 0 23.1443 45.9009 15.4786 0 2.01918 61.1856 20.7323 0.0504541 99.7429 16.7616 14.2694 t 0 0 0 0 0 0 0 0 29.1237 1.57293 11.4635 0 0.0504796 11.7526 10.2114 97.8809 0.0514139 65.0352 73.8204

M09453_2.00_shift8 (TFAP4)
; positions_6nt_m5 versus M09453_2.00 (TFAP4); m=170/244; ncol2=10; w=-1; offset=-1; strand=D; shift=8; score=0.623063; --------amhCAGCTGk- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 32.2 41.9 33 1.4 94.1 2 6 2.2 1.7 24.4 0 c 0 0 0 0 0 0 0 0 23.7 25 26.8 95.5 1.7 2 89.9 1.9 1.6 10 0 g 0 0 0 0 0 0 0 0 21.7 20.7 11.5 1.4 1.8 91.3 2.1 1.7 95.4 28.8 0 t 0 0 0 0 0 0 0 0 22.3 12.3 28.7 1.7 2.4 4.7 2 94.2 1.3 36.8 0

M04118_2.00_rc_shift8 (MYOD1_rc)
; positions_6nt_m5 versus M04118_2.00_rc (MYOD1_rc); m=171/244; ncol2=12; w=-1; offset=-1; strand=R; shift=8; score=0.62107; --------yrACAgcTGTT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11.845 50.6143 69.3012 0.78637 94.3106 9.59507 18.6344 0 0 2.29773 2.17034 c 0 0 0 0 0 0 0 0 34.9626 5.11876 15.3189 99.2136 0 22.1391 46.0793 2.52029 0 12.9126 12.3972 g 0 0 0 0 0 0 0 0 22.6332 42.3833 7.87305 0 3.15615 51.3644 21.3656 0.469885 100 11.2945 10.753 t 0 0 0 0 0 0 0 0 30.5592 1.8837 7.50687 0 2.53322 16.9014 13.9207 97.0098 0 73.4951 74.6794

M04187_2.00_rc_shift8 (MSC_rc)
; positions_6nt_m5 versus M04187_2.00_rc (MSC_rc); m=172/244; ncol2=12; w=-1; offset=-1; strand=R; shift=8; score=0.620981; --------yraCAGCTGty ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11.1823 53.067 60.405 0.355366 94.4744 0 10.0671 0.721311 0 3.32594 5.48824 c 0 0 0 0 0 0 0 0 40.3134 15.1213 20.2068 99.6446 0.876011 2.15124 85.54 3.54098 0 12.5499 32.1454 g 0 0 0 0 0 0 0 0 21.7236 31.3837 19.3882 0 4.6496 91.395 2.92862 3.80328 99.7865 21.9512 10.1212 t 0 0 0 0 0 0 0 0 26.7806 0.42796 0 0 0 6.45372 1.46431 91.9344 0.213523 62.1729 52.2452

M04120_2.00_rc_shift8 (MYOD1_rc)
; positions_6nt_m5 versus M04120_2.00_rc (MYOD1_rc); m=173/244; ncol2=12; w=-1; offset=-1; strand=R; shift=8; score=0.620103; --------yraCAgcTGTT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 12.2781 45.9062 58.32 0 96.501 9.97999 11.878 0.516987 0 2.12132 2.79772 c 0 0 0 0 0 0 0 0 36.6092 5.17845 13.2857 100 0.289575 17.2086 60.9902 1.03397 0 14.0428 11.1357 g 0 0 0 0 0 0 0 0 21.7554 47.3758 12.644 0 2.60618 60.2551 15.7789 0 100 13.7272 12.4609 t 0 0 0 0 0 0 0 0 29.3573 1.53954 15.7503 0 0.603282 12.5563 11.3528 98.449 0 70.1087 73.6057

M04116_2.00_shift8 (MYOD1)
; positions_6nt_m5 versus M04116_2.00 (MYOD1); m=174/244; ncol2=12; w=-1; offset=-1; strand=D; shift=8; score=0.618923; --------baACAssTGty ; cor=; Ncor= a 0 0 0 0 0 0 0 0 6.87637 66.6179 75.5249 0 99.781 8.19312 12.9386 0 0 17.1894 0.653595 c 0 0 0 0 0 0 0 0 37.1617 15.7407 14.1436 100 0 31.0168 47.5146 0 0 13.279 36.9281 g 0 0 0 0 0 0 0 0 29.7001 16.0819 8.78453 0 0.218978 50.5486 30.4825 0 100 13.8493 10 t 0 0 0 0 0 0 0 0 26.2619 1.55945 1.54696 0 0 10.2414 9.06433 100 0 55.6823 52.4183

M02804_2.00_rc_shift8 (BHLHE22_rc)
; positions_6nt_m5 versus M02804_2.00_rc (BHLHE22_rc); m=175/244; ncol2=12; w=-1; offset=-1; strand=R; shift=8; score=0.618624; --------wAmCATATGkT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 32.0943 73.5165 40.3197 0.139553 96.7711 0 99.9002 0.334054 0 0.15984 0.734067 c 0 0 0 0 0 0 0 0 19.2646 1.35135 35.3846 99.7807 0.0966744 0.0598444 0.0199601 1.31657 0 18.6214 14.8482 g 0 0 0 0 0 0 0 0 18.2054 21.5629 24.036 0.0797448 2.22351 0.0997407 0.0798403 0 99.5822 25.6943 0.917584 t 0 0 0 0 0 0 0 0 30.4357 3.56933 0.25974 0 0.908739 99.8404 0 98.3494 0.417827 55.5245 83.5002

M04123_2.00_shift8 (MYOD1)
; positions_6nt_m5 versus M04123_2.00 (MYOD1); m=176/244; ncol2=12; w=-1; offset=-1; strand=D; shift=8; score=0.616548; --------srmCAscTGtC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10.0196 51.7471 54.6137 0 86.5646 7.46562 16.6994 2.86738 5.03731 20.6742 0.625 c 0 0 0 0 0 0 0 0 39.0963 11.1481 25 97.8846 1.87075 28.4872 59.332 3.22581 0 14.541 79.5312 g 0 0 0 0 0 0 0 0 26.1297 33.1115 12.1245 0 8.16327 55.7957 20.2358 2.68817 94.9627 23.6799 5 t 0 0 0 0 0 0 0 0 24.7544 3.99334 8.2618 2.11538 3.40136 8.25147 3.73281 91.2186 0 41.1048 14.8438

M04119_2.00_rc_shift8 (MYOD1_rc)
; positions_6nt_m5 versus M04119_2.00_rc (MYOD1_rc); m=177/244; ncol2=12; w=-1; offset=-1; strand=R; shift=8; score=0.615836; --------YGaCAGsTGty ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 8.77458 47.8224 0 85.4766 2.12014 9.9115 0 0 4.48087 4.16667 c 0 0 0 0 0 0 0 0 73.8053 5.74887 18.7874 100 0 19.788 52.0354 10.0787 1.05079 20.1093 39.5115 g 0 0 0 0 0 0 0 0 0 85.4766 9.26558 0 14.5234 68.5512 30.2655 0.944882 98.9492 13.6612 14.6552 t 0 0 0 0 0 0 0 0 26.1947 0 24.1247 0 0 9.54064 7.78761 88.9764 0 61.7486 41.6667

M04213_2.00_rc_shift8 (MESP2_rc)
; positions_6nt_m5 versus M04213_2.00_rc (MESP2_rc); m=178/244; ncol2=12; w=-1; offset=-1; strand=R; shift=8; score=0.615381; --------yrmCAwwTGkT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 12.0482 34.9112 45.4545 4 89.7297 27.0161 67.7551 0 0 2.03046 5.46218 c 0 0 0 0 0 0 0 0 48.7952 1.77515 38.8889 94.8571 1.08108 6.04839 0 8.28729 4.30108 13.7056 14.7059 g 0 0 0 0 0 0 0 0 13.253 63.3136 15.6566 0 5.40541 0 4.4898 0 89.2473 37.0558 10.084 t 0 0 0 0 0 0 0 0 25.9036 0 0 1.14286 3.78378 66.9355 27.7551 91.7127 6.45161 47.2081 69.7479

M04093_2.00_shift8 (TCF21)
; positions_6nt_m5 versus M04093_2.00 (TCF21); m=179/244; ncol2=12; w=-1; offset=-1; strand=D; shift=8; score=0.614932; --------caCCATATGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 12.9587 60.6398 7.45394 0.449438 83.0476 0 88.4381 2.1 0.447427 1.94473 9.01554 c 0 0 0 0 0 0 0 0 45.6422 1.39082 73.0318 97.9775 0 5.43807 4.36105 10.7 0 8.80246 45.6995 g 0 0 0 0 0 0 0 0 20.0688 24.4784 17.1692 1.34831 15.619 6.74723 7.20081 0 97.5391 54.5548 0.621762 t 0 0 0 0 0 0 0 0 21.3303 13.491 2.34506 0.224719 1.33333 87.8147 0 87.2 2.01342 34.6981 44.6632

M04095_2.00_rc_shift8 (TCF21_rc)
; positions_6nt_m5 versus M04095_2.00_rc (TCF21_rc); m=180/244; ncol2=12; w=-1; offset=-1; strand=R; shift=8; score=0.613329; --------yrmCATATGGT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 9.96122 43.6861 33.2828 0.6691 98.0388 0.258758 96.9331 0.09994 0 0.26377 6.41443 c 0 0 0 0 0 0 0 0 41.1513 1.87006 59.5188 99.3309 0 0.855892 1.04867 1.93884 0.122249 11.0163 19.9379 g 0 0 0 0 0 0 0 0 19.3713 50.7615 6.53533 0 1.88113 1.37341 1.82034 0.039976 99.8166 76.0124 1.2415 t 0 0 0 0 0 0 0 0 29.5162 3.68228 0.663004 0 0.080048 97.5119 0.197863 97.9212 0.0611247 12.7075 72.4061

M04214_2.00_rc_shift10 (TCF4_rc)
; positions_6nt_m5 versus M04214_2.00_rc (TCF4_rc); m=181/244; ncol2=8; w=0; offset=1; strand=R; shift=10; score=0.612884; ----------gCAGGTGb- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 24.0633 0 100 0 5.88659 0 0 8.34889 0 c 0 0 0 0 0 0 0 0 0 0 13.9395 100 0 17.2037 2.55795 0 0 34.7188 0 g 0 0 0 0 0 0 0 0 0 0 52.9805 0 0 81.8618 91.5555 0 100 27.7783 0 t 0 0 0 0 0 0 0 0 0 0 9.01677 0 0 0.934488 0 100 0 29.154 0

M04212_2.00_shift8 (MESP2)
; positions_6nt_m5 versus M04212_2.00 (MESP2); m=182/244; ncol2=12; w=-1; offset=-1; strand=D; shift=8; score=0.60715; --------cAmCATATGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 13.6894 82.7881 63.8344 0.801782 98.3657 24.5852 82.329 0 0.843694 0 0.224014 c 0 0 0 0 0 0 0 0 56.0144 0 33.2026 99.1982 0 0 0 0.39929 0.222025 3.17253 58.6918 g 0 0 0 0 0 0 0 0 15.2603 16.6914 2.96296 0 0.530035 0 0 0.79858 98.8899 56.5406 0 t 0 0 0 0 0 0 0 0 15.0359 0.520446 0 0 1.10424 75.4148 17.671 98.8021 0.044405 40.2868 41.0842

M09458_2.00_shift8 (TCF12)
; positions_6nt_m5 versus M09458_2.00 (TCF12); m=183/244; ncol2=10; w=-1; offset=-1; strand=D; shift=8; score=0.606906; --------carCAGCTGb- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.2 51.9 32.5 0.1 88.7 0.1 0.1 0.1 0.1 0.6 0 c 0 0 0 0 0 0 0 0 42.4 16.2 24.4 99.7 0.1 2.4 89.1 0.1 0.1 35.9 0 g 0 0 0 0 0 0 0 0 20.6 18.2 43 0.1 0.1 97.4 10.7 0.1 99.7 25.8 0 t 0 0 0 0 0 0 0 0 15.7 13.7 0.1 0.1 11.1 0.1 0.1 99.7 0.1 37.6 0

M04085_2.00_rc_shift8 (MYF6_rc)
; positions_6nt_m5 versus M04085_2.00_rc (MYF6_rc); m=184/244; ncol2=12; w=-1; offset=-1; strand=R; shift=8; score=0.605245; --------yRwCAgsTGTy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11.3897 25.486 45.2196 0 99.9611 8.35763 3.64431 0 0 3.23858 2.5909 c 0 0 0 0 0 0 0 0 42.4198 3.11215 8.07788 100 0 19.5335 55.4519 0 0 10.635 25.0078 g 0 0 0 0 0 0 0 0 17.7357 70.6822 6.66943 0 0.0388576 64.966 27.8134 0 100 13.3644 8.00426 t 0 0 0 0 0 0 0 0 28.4548 0.719626 40.0331 0 0 7.14286 13.0904 100 0 72.762 64.397

M09838_2.00_rc_shift8 (MYOD1_rc)
; positions_6nt_m5 versus M09838_2.00_rc (MYOD1_rc); m=185/244; ncol2=12; w=-1; offset=-1; strand=R; shift=8; score=0.604632; --------sraCAGGTGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20 40 60 0 100 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 40 20 0 100 0 0 20 0 0 20 40 g 0 0 0 0 0 0 0 0 40 40 20 0 0 80 80 0 100 40 0 t 0 0 0 0 0 0 0 0 0 0 20 0 0 20 0 100 0 40 60

M07538_2.00_shift8 (TWIST2)
; positions_6nt_m5 versus M07538_2.00 (TWIST2); m=186/244; ncol2=12; w=-1; offset=-1; strand=D; shift=8; score=0.603715; --------caACAyrTGcg ; cor=; Ncor= a 0 0 0 0 0 0 0 0 13.3333 66.6667 80 20 100 13.3333 66.6667 0 0 6.66667 13.3333 c 0 0 0 0 0 0 0 0 53.3333 13.3333 13.3333 80 0 33.3333 6.66667 6.66667 6.66667 66.6667 20 g 0 0 0 0 0 0 0 0 20 13.3333 0 0 0 6.66667 26.6667 20 93.3333 20 46.6667 t 0 0 0 0 0 0 0 0 13.3333 6.66667 6.66667 0 0 46.6667 0 73.3333 0 6.66667 20

M05956_2.00_shift8 (TWIST2)
; positions_6nt_m5 versus M05956_2.00 (TWIST2); m=187/244; ncol2=12; w=-1; offset=-1; strand=D; shift=8; score=0.603715; --------caACAyrTGcg ; cor=; Ncor= a 0 0 0 0 0 0 0 0 13.3333 66.6667 80 20 100 13.3333 66.6667 0 0 6.66667 13.3333 c 0 0 0 0 0 0 0 0 53.3333 13.3333 13.3333 80 0 33.3333 6.66667 6.66667 6.66667 66.6667 20 g 0 0 0 0 0 0 0 0 20 13.3333 0 0 0 6.66667 26.6667 20 93.3333 20 46.6667 t 0 0 0 0 0 0 0 0 13.3333 6.66667 6.66667 0 0 46.6667 0 73.3333 0 6.66667 20

M04121_2.00_rc_shift8 (MYOD1_rc)
; positions_6nt_m5 versus M04121_2.00_rc (MYOD1_rc); m=188/244; ncol2=12; w=-1; offset=-1; strand=R; shift=8; score=0.602881; --------yGwCAGcTGty ; cor=; Ncor= a 0 0 0 0 0 0 0 0 9.18053 8.18243 45.4002 2.06642 96.3757 3.53303 5.90944 2.90163 1.18782 7.10138 3.7062 c 0 0 0 0 0 0 0 0 54.5903 4.15828 18.0281 96.1624 0.517751 15.0538 62.241 3.68011 2.07869 12.9969 30.1887 g 0 0 0 0 0 0 0 0 10.4744 87.391 9.69472 0 3.10651 68.0492 23.4075 1.20311 96.7335 21.7061 8.49057 t 0 0 0 0 0 0 0 0 25.7548 0.268276 26.8771 1.77122 0 13.3641 8.44206 92.2151 0 58.1956 57.6146

M08712_2.00_rc_shift10 (TFAP4_rc)
; positions_6nt_m5 versus M08712_2.00_rc (TFAP4_rc); m=189/244; ncol2=10; w=0; offset=1; strand=R; shift=10; score=0.602196; ----------yCAGCTGwk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 14.2 0.4 99.2 0 1 0.2 0 27.4 5.6 c 0 0 0 0 0 0 0 0 0 0 51.4 99.6 0 1.2 97.4 0.2 0 12.8 5.8 g 0 0 0 0 0 0 0 0 0 0 6.4 0 0 98 1.6 0.2 99.8 18 36.2 t 0 0 0 0 0 0 0 0 0 0 28 0 0.8 0.8 0 99.4 0.2 41.8 52.4

M04092_2.00_shift8 (TCF21)
; positions_6nt_m5 versus M04092_2.00 (TCF21); m=190/244; ncol2=12; w=-1; offset=-1; strand=D; shift=8; score=0.600985; --------sAACAGCTGyy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2.38095 67.9724 76.0309 0 100 0 6.00601 2.1875 0 4.79798 7.5419 c 0 0 0 0 0 0 0 0 50.3401 14.7465 9.02062 100 0 1.26582 88.5886 5.625 0.996678 26.2626 27.6536 g 0 0 0 0 0 0 0 0 28.9116 16.5899 14.9485 0 0 93.3544 4.8048 0 98.0066 20.7071 10.0559 t 0 0 0 0 0 0 0 0 18.3673 0.691244 0 0 0 5.37975 0.600601 92.1875 0.996678 48.2323 54.7486

M09463_2.00_shift8 (M09463_2.00)
; positions_6nt_m5 versus M09463_2.00; m=191/244; ncol2=10; w=-1; offset=-1; strand=D; shift=8; score=0.599248; --------kraCAGCTGy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 16.7 59.9 65.4 0.1 99 1.4 1 0.2 0.1 7.8 0 c 0 0 0 0 0 0 0 0 23.1 9.7 7.5 99.7 0.6 4.3 90.7 0.2 0.1 26 0 g 0 0 0 0 0 0 0 0 25.5 25.6 23 0.1 0.2 93.7 7.2 0.2 99.7 8.4 0 t 0 0 0 0 0 0 0 0 34.8 4.8 4.1 0.1 0.2 0.6 1.1 99.4 0.1 57.8 0

M09002_2.00_rc_shift10 (M09002_2.00_rc)
; positions_6nt_m5 versus M09002_2.00_rc; m=192/244; ncol2=8; w=0; offset=1; strand=R; shift=10; score=0.592481; ----------sCAGGTGk- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 19.6429 0 100 0 0 0 0 5.35714 0 c 0 0 0 0 0 0 0 0 0 0 48.2143 100 0 0 0 0 0 19.6429 0 g 0 0 0 0 0 0 0 0 0 0 26.7857 0 0 100 100 0 100 48.2143 0 t 0 0 0 0 0 0 0 0 0 0 5.35714 0 0 0 0 100 0 26.7857 0

M08886_2.00_rc_shift10 (SNAI1_rc)
; positions_6nt_m5 versus M08886_2.00_rc (SNAI1_rc); m=193/244; ncol2=8; w=0; offset=1; strand=R; shift=10; score=0.592481; ----------sCAGGTGk- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 19.6429 0 100 0 0 0 0 5.35714 0 c 0 0 0 0 0 0 0 0 0 0 48.2143 100 0 0 0 0 0 19.6429 0 g 0 0 0 0 0 0 0 0 0 0 26.7857 0 0 100 100 0 100 48.2143 0 t 0 0 0 0 0 0 0 0 0 0 5.35714 0 0 0 0 100 0 26.7857 0

M04087_2.00_rc_shift8 (MYF6_rc)
; positions_6nt_m5 versus M04087_2.00_rc (MYF6_rc); m=194/244; ncol2=12; w=-1; offset=-1; strand=R; shift=8; score=0.592144; --------yRwCAgsTGTT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11.3996 28.5844 52.0279 0 100 10.876 3.86168 0.0218126 0 1.63235 0.482375 c 0 0 0 0 0 0 0 0 37.0241 1.87851 7.79873 100 0 17.6066 55.0235 0 0 8.01533 19.7238 g 0 0 0 0 0 0 0 0 19.5702 69.5371 5.33498 0 0 64.2304 26.4754 0 100 11.3877 4.20532 t 0 0 0 0 0 0 0 0 32.0061 0 34.8384 0 0 7.28701 14.6395 99.9782 0 78.9646 75.5885

M04117_2.00_rc_shift8 (MYOD1_rc)
; positions_6nt_m5 versus M04117_2.00_rc (MYOD1_rc); m=195/244; ncol2=12; w=-1; offset=-1; strand=R; shift=8; score=0.591556; --------CGwCAgsTGty ; cor=; Ncor= a 0 0 0 0 0 0 0 0 5.43294 8.14941 39.3596 6.35452 89.2977 0 8.03738 0 4.30108 7.26141 0.167504 c 0 0 0 0 0 0 0 0 73.6842 1.18846 22.8079 89.2977 0 14.9733 54.0187 9.57792 0 20.9544 26.8007 g 0 0 0 0 0 0 0 0 3.90492 90.6621 11.5271 0 10.7023 64.8841 31.028 3.73377 95.6989 16.39 10.2178 t 0 0 0 0 0 0 0 0 16.9779 0 26.3054 4.34783 0 20.1426 6.91589 86.6883 0 55.3942 62.8141

M04186_2.00_rc_shift8 (MSC_rc)
; positions_6nt_m5 versus M04186_2.00_rc (MSC_rc); m=196/244; ncol2=12; w=-1; offset=-1; strand=R; shift=8; score=0.589514; --------yrcCATATGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11.0224 63.5606 22.1969 9.29507 93.1327 0 89.9795 3.95968 2.37797 0.4561 6.06926 c 0 0 0 0 0 0 0 0 38.5405 1.26904 66.0205 82.0649 1.76991 8.76289 0.239398 0.863931 7.54068 10.1102 29.7751 g 0 0 0 0 0 0 0 0 18.282 31.8347 10.2242 6.51903 0 0.824742 9.78112 0.467963 82.3217 62.7518 0 t 0 0 0 0 0 0 0 0 32.1551 3.33575 1.55834 2.12102 5.09735 90.4124 0 94.7084 7.7597 26.6819 64.1557

M07805_2.00_shift7 (TCF12)
; positions_6nt_m5 versus M07805_2.00 (TCF12); m=197/244; ncol2=11; w=-2; offset=-2; strand=D; shift=7; score=0.588323; -------rsagCAGsTGk- ; cor=; Ncor= a 0 0 0 0 0 0 0 32 18.2222 48.4444 15.5556 0 100 0 6.22221 0 0 3.7778 0 c 0 0 0 0 0 0 0 19.1111 45.1111 11.7778 20.6667 100 0 3.5556 59.3334 0 0 24.8889 0 g 0 0 0 0 0 0 0 35.1111 31.3333 18 63.7777 0 0 96.4444 34.4444 0 100 32 0 t 0 0 0 0 0 0 0 13.7778 5.33331 21.7778 0 0 0 0 0 100 0 39.3333 0

M04084_2.00_rc_shift8 (MYF6_rc)
; positions_6nt_m5 versus M04084_2.00_rc (MYF6_rc); m=198/244; ncol2=12; w=-1; offset=-1; strand=R; shift=8; score=0.587965; --------yGwCAgsTGty ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10.839 5.48096 26.2027 0.18731 99.3184 1.20681 2.6266 0.397289 0.0473037 23.4605 2.53915 c 0 0 0 0 0 0 0 0 52.5295 1.34273 9.99427 98.9464 0.211516 21.6044 51.6091 0.841318 0 9.64965 37.1138 g 0 0 0 0 0 0 0 0 8.96209 93.0222 3.29324 0.538516 0.470035 66.3512 36.4647 0 99.9527 16.3578 8.04063 t 0 0 0 0 0 0 0 0 27.6694 0.154083 60.5097 0.327792 0 10.8377 9.29957 98.7614 0 50.5321 52.3064

M09469_2.00_shift9 (M09469_2.00)
; positions_6nt_m5 versus M09469_2.00; m=199/244; ncol2=8; w=0; offset=0; strand=D; shift=9; score=0.585371; ---------rACAGCTG-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 57.2 74.1 0.1 99.7 0.4 1 0.1 0.1 0 0 c 0 0 0 0 0 0 0 0 0 13.1 4.6 99.7 0.1 0.1 92.7 0.1 0.1 0 0 g 0 0 0 0 0 0 0 0 0 28.2 21.2 0.1 0.1 99.4 5.4 0.1 99.7 0 0 t 0 0 0 0 0 0 0 0 0 1.5 0.1 0.1 0.1 0.1 0.9 99.7 0.1 0 0

M05986_2.00_rc_shift9 (M05986_2.00_rc)
; positions_6nt_m5 versus M05986_2.00_rc; m=200/244; ncol2=15; w=0; offset=0; strand=R; shift=9; score=0.583285; ---------rmCAkATGGy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 33.3333 61.1111 0 100 0 77.7778 0 0 0 5.55556 c 0 0 0 0 0 0 0 0 0 0 33.3333 100 0 0 5.55556 0 0 11.1111 33.3333 g 0 0 0 0 0 0 0 0 0 50 5.55556 0 0 61.1111 16.6667 0 100 77.7778 11.1111 t 0 0 0 0 0 0 0 0 0 16.6667 0 0 0 38.8889 0 100 0 11.1111 50

M08060_2.00_shift6 (M08060_2.00)
; positions_6nt_m5 versus M08060_2.00; m=201/244; ncol2=13; w=-3; offset=-3; strand=D; shift=6; score=0.579362; ------rrgrrCAGSTGsw ; cor=; Ncor= a 0 0 0 0 0 0 33.8786 27.1681 20.8738 43.1712 60.2268 0 100 0 0.0775067 0.656768 0 11.6627 28.7999 c 0 0 0 0 0 0 18.0428 17.6185 24.2514 11.8504 2.66786 100 0 0 73.7211 0 0 44.8723 20.4087 g 0 0 0 0 0 0 31.2352 47.4096 30.966 44.9131 37.0686 0 0 100 26.2014 0 100 26.5685 22.7992 t 0 0 0 0 0 0 16.8434 7.8037 23.9088 0.0652688 0.0367137 0 0 0 0 99.3432 0 16.8965 27.9922

M04141_2.00_shift7 (FERD3L)
; positions_6nt_m5 versus M04141_2.00 (FERD3L); m=202/244; ncol2=14; w=-2; offset=-2; strand=D; shift=7; score=0.577126; -------GTrmCAtaTGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.369906 56.5803 54.9343 0 100 0 65.2307 0 0 0.686365 0 c 0 0 0 0 0 0 0 0 24.7273 11.4716 31.6816 100 0 12.9965 20.4914 0.192099 0 8.00201 41.1156 g 0 0 0 0 0 0 0 100 0 31.9482 12.5303 0 0 24.0649 14.2779 0.0250564 100 57.1357 2.98096 t 0 0 0 0 0 0 0 0 74.9028 0 0.853771 0 0 62.9386 0 99.7828 0 34.1759 55.9035

M04081_2.00_shift10 (MLX)
; positions_6nt_m5 versus M04081_2.00 (MLX); m=203/244; ncol2=8; w=0; offset=1; strand=D; shift=10; score=0.576741; ----------kCACrTGm- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 13.3117 0 97.2061 0 49.9151 0 0 39.592 0 c 0 0 0 0 0 0 0 0 0 0 17.9673 100 0 100 1.02845 0 0 32.6457 0 g 0 0 0 0 0 0 0 0 0 0 25.9169 0 2.79388 0 49.0564 0 100 19.9483 0 t 0 0 0 0 0 0 0 0 0 0 42.8041 0 0 0 0 100 0 7.81398 0

M05949_2.00_rc_shift9 (M05949_2.00_rc)
; positions_6nt_m5 versus M05949_2.00_rc; m=204/244; ncol2=8; w=0; offset=0; strand=R; shift=9; score=0.57539; ---------rrCAGGTG-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 27.2727 59.0909 0 100 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 4.54545 0 100 0 0 0 0 5.88235 0 0 g 0 0 0 0 0 0 0 0 0 63.6364 40.9091 0 0 100 100 0 94.1176 0 0 t 0 0 0 0 0 0 0 0 0 4.54545 0 0 0 0 0 100 0 0 0

M04143_2.00_shift7 (FERD3L)
; positions_6nt_m5 versus M04143_2.00 (FERD3L); m=205/244; ncol2=14; w=-2; offset=-2; strand=D; shift=7; score=0.572625; -------GTrmCAtaTGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.756792 60.8803 58.7424 0 99.9672 0 67.1684 0 0 1.00969 0 c 0 0 0 0 0 0 0 0 20.4398 11.6466 30.4301 100 0.0246164 12.9854 19.1256 0.0574241 0 7.8969 37.5861 g 0 0 0 0 0 0 0 100 0 27.4732 10.023 0 0.00820546 21.1249 13.706 0 100 51.8634 4.0997 t 0 0 0 0 0 0 0 0 78.8034 0 0.804466 0 0 65.8897 0 99.9426 0 39.23 58.3142

M07842_2.00_rc_shift11 (ZEB1_rc)
; positions_6nt_m5 versus M07842_2.00_rc (ZEB1_rc); m=206/244; ncol2=8; w=0; offset=2; strand=R; shift=11; score=0.568158; -----------CAGGTGag ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 2.2173 100 0 0 0 20.3991 45.0111 18.1818 c 0 0 0 0 0 0 0 0 0 0 0 97.7827 0 0 0 0 0 18.847 11.7517 g 0 0 0 0 0 0 0 0 0 0 0 0 0 100 100 0 79.6009 14.6341 67.4057 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 21.5078 2.6608

M05964_2.00_rc_shift6 (M05964_2.00_rc)
; positions_6nt_m5 versus M05964_2.00_rc; m=207/244; ncol2=12; w=-3; offset=-3; strand=R; shift=6; score=0.56649; ------GGkckCAGRTGk- ; cor=; Ncor= a 0 0 0 0 0 0 6.25 5.88235 11.7647 11.7647 5.88235 0 100 0 29.4118 0 0 0 0 c 0 0 0 0 0 0 6.25 0 11.7647 64.7059 11.7647 100 0 0 0 0 0 12.5 0 g 0 0 0 0 0 0 68.75 70.5882 47.0588 11.7647 41.1765 0 0 94.1176 70.5882 0 100 50 0 t 0 0 0 0 0 0 18.75 23.5294 29.4118 11.7647 41.1765 0 0 5.88235 0 100 0 37.5 0

M08755_2.00_rc_shift7 (M08755_2.00_rc)
; positions_6nt_m5 versus M08755_2.00_rc; m=208/244; ncol2=13; w=-2; offset=-2; strand=R; shift=7; score=0.566236; -------rgrrCAGCTGsk ; cor=; Ncor= a 0 0 0 0 0 0 0 31.2 22.2 37.4 55.2 0 99.4 1.2 0.6 1 0 7.4 24.2 c 0 0 0 0 0 0 0 19.4 16 4.8 4.6 99.8 0.4 0.8 87.6 0.6 0.4 44.6 9.8 g 0 0 0 0 0 0 0 38 43 57.4 39.8 0 0 97 11.4 0 99.2 26.4 35.6 t 0 0 0 0 0 0 0 11.4 18.8 0.4 0.4 0.2 0.2 1 0.4 98.4 0.4 21.6 30.4

M08721_2.00_rc_shift7 (MYOG_rc)
; positions_6nt_m5 versus M08721_2.00_rc (MYOG_rc); m=209/244; ncol2=13; w=-2; offset=-2; strand=R; shift=7; score=0.566236; -------rgrrCAGCTGsk ; cor=; Ncor= a 0 0 0 0 0 0 0 31.2 22.2 37.4 55.2 0 99.4 1.2 0.6 1 0 7.4 24.2 c 0 0 0 0 0 0 0 19.4 16 4.8 4.6 99.8 0.4 0.8 87.6 0.6 0.4 44.6 9.8 g 0 0 0 0 0 0 0 38 43 57.4 39.8 0 0 97 11.4 0 99.2 26.4 35.6 t 0 0 0 0 0 0 0 11.4 18.8 0.4 0.4 0.2 0.2 1 0.4 98.4 0.4 21.6 30.4

M00220_2.00_rc_shift10 (SNAI2_rc)
; positions_6nt_m5 versus M00220_2.00_rc (SNAI2_rc); m=210/244; ncol2=8; w=0; offset=1; strand=R; shift=10; score=0.560962; ----------rCAGGTgs- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 50.4755 2.99164 99.9786 7.86204 0 0 15.8913 16.906 0 c 0 0 0 0 0 0 0 0 0 0 2.9212 96.2474 0.00714082 2.86347 2.14939 0.00714082 2.81203 39.4285 0 g 0 0 0 0 0 0 0 0 0 0 35.9181 0.00746046 0.00714082 89.2674 97.1223 0.00714082 60.7343 26.7596 0 t 0 0 0 0 0 0 0 0 0 0 10.6852 0.753506 0.00714082 0.00714082 0.721223 99.9786 20.5624 16.906 0

M05993_2.00_shift7 (M05993_2.00)
; positions_6nt_m5 versus M05993_2.00; m=211/244; ncol2=10; w=-2; offset=-2; strand=D; shift=7; score=0.558182; -------GtrACAGvTG-- ; cor=; Ncor= a 0 0 0 0 0 0 0 5.26316 10.5263 42.1053 73.6842 0 94.7368 0 26.3158 0 0 0 0 c 0 0 0 0 0 0 0 0 10.5263 21.0526 0 100 0 5.26316 42.1053 5.26316 0 0 0 g 0 0 0 0 0 0 0 78.9474 21.0526 36.8421 10.5263 0 5.26316 78.9474 26.3158 0 89.4737 0 0 t 0 0 0 0 0 0 0 15.7895 57.8947 0 15.7895 0 0 15.7895 5.26316 94.7368 10.5263 0 0

M07624_2.00_rc_shift8 (ZNF778_rc)
; positions_6nt_m5 versus M07624_2.00_rc (ZNF778_rc); m=212/244; ncol2=15; w=-1; offset=-1; strand=R; shift=8; score=0.53998; --------yrCCAGAYGCc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 4.33239 53.4801 2.05966 9.16193 96.3778 0.0710227 96.0938 0.923295 18.2528 9.44602 19.3892 c 0 0 0 0 0 0 0 0 58.0256 8.02557 86.4347 88.4233 0.0710227 0.0710227 2.91193 27.9119 2.62784 87.8551 60.0142 g 0 0 0 0 0 0 0 0 10.0142 32.4574 8.59375 0.355114 3.48011 99.5028 0.923295 0.0710227 75.6392 1.49148 1.20739 t 0 0 0 0 0 0 0 0 27.6278 6.03693 2.91193 2.05966 0.0710227 0.355114 0.0710227 71.0937 3.48011 1.20739 19.3892

M04140_2.00_shift7 (FERD3L)
; positions_6nt_m5 versus M04140_2.00 (FERD3L); m=213/244; ncol2=14; w=-2; offset=-2; strand=D; shift=7; score=0.539875; -------GTrACAGCTGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0.161872 2.32598 50.3918 71.1511 0 98.6012 0 13.3506 0.480112 0 5.77605 0.249966 c 0 0 0 0 0 0 0 0 23.8303 19.9959 11.4673 100 0.699417 1.39659 84.2559 0.393425 0 10.6131 42.9097 g 0 0 0 0 0 0 0 99.8381 1.96421 29.2643 13.0987 0 0.429642 87.7835 2.39349 0.420098 99.8785 31.6264 8.25226 t 0 0 0 0 0 0 0 0 71.8795 0.347902 4.28292 0 0.269775 10.8199 0 98.7064 0.121453 51.9845 48.588

M04142_2.00_shift7 (FERD3L)
; positions_6nt_m5 versus M04142_2.00 (FERD3L); m=214/244; ncol2=14; w=-2; offset=-2; strand=D; shift=7; score=0.538311; -------GTrACAGCTGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0.194412 1.67751 54.0747 74.5776 0 99.6884 0 14.6928 0.446469 0 5.9479 0.394111 c 0 0 0 0 0 0 0 0 18.5841 18.6908 10.4326 100 0 1.40383 83.1012 0 0 10.2695 35.5606 g 0 0 0 0 0 0 0 99.8056 1.28301 26.8675 10.4553 0 0 85.1363 2.20599 0 99.8191 26.0294 8.91053 t 0 0 0 0 0 0 0 0 78.4554 0.366931 4.53454 0 0.311597 13.4598 0 99.5535 0.180873 57.7531 55.1348

M02728_2.00_rc_shift11 (TCF4_rc)
; positions_6nt_m5 versus M02728_2.00_rc (TCF4_rc); m=215/244; ncol2=7; w=0; offset=2; strand=R; shift=11; score=0.537256; -----------CAGGTGy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0.647821 98.3422 0.0574053 2.40128 0.2936 0.298507 2.85714 0 c 0 0 0 0 0 0 0 0 0 0 0 97.821 0.236827 3.90356 8.96478 0.998238 0 47.9365 0 g 0 0 0 0 0 0 0 0 0 0 0 0.294464 0.769686 95.3502 88.6339 1.1744 99.1642 9.66811 0 t 0 0 0 0 0 0 0 0 0 0 0 1.23675 0.651273 0.688863 0 97.5338 0.537313 39.5382 0

M08767_2.00_rc_shift10 (M08767_2.00_rc)
; positions_6nt_m5 versus M08767_2.00_rc; m=216/244; ncol2=7; w=0; offset=1; strand=R; shift=10; score=0.536064; ----------GCAGsTG-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 17.7419 0 100 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 3.22581 100 0 0 56.4516 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 75.8065 0 0 100 43.5484 0 100 0 0 t 0 0 0 0 0 0 0 0 0 0 3.22581 0 0 0 0 100 0 0 0

M08717_2.00_rc_shift10 (MYF6_rc)
; positions_6nt_m5 versus M08717_2.00_rc (MYF6_rc); m=217/244; ncol2=7; w=0; offset=1; strand=R; shift=10; score=0.536064; ----------GCAGsTG-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 17.7419 0 100 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 3.22581 100 0 0 56.4516 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 75.8065 0 0 100 43.5484 0 100 0 0 t 0 0 0 0 0 0 0 0 0 0 3.22581 0 0 0 0 100 0 0 0

M08739_2.00_shift7 (BHLHA15)
; positions_6nt_m5 versus M08739_2.00 (BHLHA15); m=218/244; ncol2=11; w=-2; offset=-2; strand=D; shift=7; score=0.53578; -------ssArCAGCTGg- ; cor=; Ncor= a 0 0 0 0 0 0 0 17.2 15.2 68.8 28 5.6 98.4 0.6 5.4 2.6 0.4 0.2 0 c 0 0 0 0 0 0 0 28.6 45 6.8 10.8 92.2 0.4 0.4 87.8 1.2 0.4 14.8 0 g 0 0 0 0 0 0 0 47.2 29.6 20 61 1.6 1 96.4 6.4 0.4 98.2 63.4 0 t 0 0 0 0 0 0 0 7 10.2 4.4 0.2 0.6 0.2 2.6 0.4 95.8 1 21.6 0

M08774_2.00_shift7 (M08774_2.00)
; positions_6nt_m5 versus M08774_2.00; m=219/244; ncol2=11; w=-2; offset=-2; strand=D; shift=7; score=0.53578; -------ssArCAGCTGg- ; cor=; Ncor= a 0 0 0 0 0 0 0 17.2 15.2 68.8 28 5.6 98.4 0.6 5.4 2.6 0.4 0.2 0 c 0 0 0 0 0 0 0 28.6 45 6.8 10.8 92.2 0.4 0.4 87.8 1.2 0.4 14.8 0 g 0 0 0 0 0 0 0 47.2 29.6 20 61 1.6 1 96.4 6.4 0.4 98.2 63.4 0 t 0 0 0 0 0 0 0 7 10.2 4.4 0.2 0.6 0.2 2.6 0.4 95.8 1 21.6 0

M08730_2.00_rc_shift6 (ASCL1_rc)
; positions_6nt_m5 versus M08730_2.00_rc (ASCL1_rc); m=220/244; ncol2=14; w=-3; offset=-3; strand=R; shift=6; score=0.528973; ------rrsrGCAGsTGsa ; cor=; Ncor= a 0 0 0 0 0 0 27.5 27.9167 23.75 49.1667 12.7083 1.45833 98.75 1.04167 2.08333 1.45833 0.833333 9.79167 37.5 c 0 0 0 0 0 0 15.2083 9.79167 27.5 0.625 8.33333 97.7083 0.208333 0.208333 35.8333 0 0.416667 42.7083 16.0417 g 0 0 0 0 0 0 40.625 49.1667 38.5417 42.0833 78.125 0.416667 0.208333 97.9167 61.4583 0.416667 98.125 25.4167 24.5833 t 0 0 0 0 0 0 16.6667 13.125 10.2083 8.125 0.833333 0.416667 0.833333 0.833333 0.625 98.125 0.625 22.0833 21.875

M08748_2.00_rc_shift6 (M08748_2.00_rc)
; positions_6nt_m5 versus M08748_2.00_rc; m=221/244; ncol2=14; w=-3; offset=-3; strand=R; shift=6; score=0.522459; ------rrvrGCAGsTGsw ; cor=; Ncor= a 0 0 0 0 0 0 31.5436 25.0559 26.6219 42.0582 10.0671 0 99.7763 0.894855 1.11857 0 0 7.38255 46.3087 c 0 0 0 0 0 0 14.094 13.8702 32.2148 0 8.2774 99.7763 0.223714 0 55.2573 0 0 53.915 8.72483 g 0 0 0 0 0 0 38.255 50.5593 35.123 46.7562 79.4183 0.223714 0 99.1051 43.6242 0 100 28.6353 19.0157 t 0 0 0 0 0 0 16.1074 10.5145 6.04027 11.1857 2.23714 0 0 0 0 100 0 10.0671 25.9508

M06050_2.00_rc_shift10 (M06050_2.00_rc)
; positions_6nt_m5 versus M06050_2.00_rc; m=222/244; ncol2=7; w=0; offset=1; strand=R; shift=10; score=0.516667; ----------aCAGGTG-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 63.6364 0 100 9.09091 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 18.1818 0 0 90.9091 100 0 100 0 0 t 0 0 0 0 0 0 0 0 0 0 18.1818 0 0 0 0 100 0 0 0

M09794_2.00_rc_shift7 (TCF3_rc)
; positions_6nt_m5 versus M09794_2.00_rc (TCF3_rc); m=223/244; ncol2=15; w=-2; offset=-2; strand=R; shift=7; score=0.503139; -------vsrGCAGGTGkb ; cor=; Ncor= a 0 0 0 0 0 0 0 36.3636 18.1818 27.2727 18.1818 0 100 0 9.09091 0 0 0 9.09091 c 0 0 0 0 0 0 0 36.3636 45.4545 18.1818 0 100 0 0 18.1818 0 0 0 36.3636 g 0 0 0 0 0 0 0 27.2727 36.3636 36.3636 81.8182 0 0 100 72.7273 0 100 36.3636 27.2727 t 0 0 0 0 0 0 0 0 0 18.1818 0 0 0 0 0 100 0 63.6364 27.2727

M05965_2.00_rc_shift7 (M05965_2.00_rc)
; positions_6nt_m5 versus M05965_2.00_rc; m=224/244; ncol2=15; w=-2; offset=-2; strand=R; shift=7; score=0.497152; -------GgmkCAGGTGbk ; cor=; Ncor= a 0 0 0 0 0 0 0 4.34783 13.0435 26.087 13.0435 0 100 0 4.34783 0 0 0 21.7391 c 0 0 0 0 0 0 0 8.69565 21.7391 47.8261 4.34783 95.6522 0 0 4.34783 0 0 30.4348 4.34783 g 0 0 0 0 0 0 0 73.913 43.4783 17.3913 43.4783 4.34783 0 95.6522 91.3043 0 100 26.087 26.087 t 0 0 0 0 0 0 0 13.0435 21.7391 8.69565 39.1304 0 0 4.34783 0 100 0 43.4783 47.8261

M00221_2.00_rc_shift10 (SNAI2_rc)
; positions_6nt_m5 versus M00221_2.00_rc (SNAI2_rc); m=225/244; ncol2=7; w=0; offset=1; strand=R; shift=10; score=0.496072; ----------rCAGGTg-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 39.6664 11.9741 94.8664 19.9736 7.08434 0.624151 17.3591 0 0 c 0 0 0 0 0 0 0 0 0 0 5.87381 77.6918 0.0166137 3.10934 0.0218815 0.0130188 6.51505 0 0 g 0 0 0 0 0 0 0 0 0 0 35.5345 0.130387 0.000506731 69.7147 85.4462 0.0139627 54.2778 0 0 t 0 0 0 0 0 0 0 0 0 0 18.9254 10.2037 5.11649 7.20238 7.44756 99.3489 21.8481 0 0

M08714_2.00_shift4 (LYL1,TAL2)
; positions_6nt_m5 versus M08714_2.00 (LYL1,TAL2); m=226/244; ncol2=14; w=-5; offset=-5; strand=D; shift=4; score=0.485463; ----sagraarCAGmwGg- ; cor=; Ncor= a 0 0 0 0 22.7373 49.0066 21.4128 32.4503 44.1501 50.9934 51.4349 1.10375 88.7417 9.49227 32.6711 26.2693 13.245 15.011 0 c 0 0 0 0 37.9691 18.1015 11.0375 11.9205 13.0243 22.0751 18.1015 81.0155 0.662252 4.41501 49.0066 4.63576 2.64901 20.3091 0 g 0 0 0 0 27.3731 18.7638 58.0574 51.2141 22.0751 20.7506 29.8013 17.66 0 73.0684 12.5828 5.07726 69.5364 44.1501 0 t 0 0 0 0 11.9205 14.128 9.49227 4.41501 20.7506 6.18102 0.662252 0.220751 10.596 13.0243 5.73951 64.0177 14.5695 20.5298 0

M08763_2.00_shift4 (TAL2)
; positions_6nt_m5 versus M08763_2.00 (TAL2); m=227/244; ncol2=14; w=-5; offset=-5; strand=D; shift=4; score=0.485463; ----sagraarCAGmwGg- ; cor=; Ncor= a 0 0 0 0 22.7373 49.0066 21.4128 32.4503 44.1501 50.9934 51.4349 1.10375 88.7417 9.49227 32.6711 26.2693 13.245 15.011 0 c 0 0 0 0 37.9691 18.1015 11.0375 11.9205 13.0243 22.0751 18.1015 81.0155 0.662252 4.41501 49.0066 4.63576 2.64901 20.3091 0 g 0 0 0 0 27.3731 18.7638 58.0574 51.2141 22.0751 20.7506 29.8013 17.66 0 73.0684 12.5828 5.07726 69.5364 44.1501 0 t 0 0 0 0 11.9205 14.128 9.49227 4.41501 20.7506 6.18102 0.662252 0.220751 10.596 13.0243 5.73951 64.0177 14.5695 20.5298 0

M00222_2.00_rc_shift7 (SNAI2_rc)
; positions_6nt_m5 versus M00222_2.00_rc (SNAI2_rc); m=228/244; ncol2=10; w=-2; offset=-2; strand=R; shift=7; score=0.483322; -------wwrrCAgGTg-- ; cor=; Ncor= a 0 0 0 0 0 0 0 26.887 25.8781 30.8883 40.2463 15.3374 88.9009 21.3174 13.9489 11.4922 20.4318 0 0 c 0 0 0 0 0 0 0 22.9116 23.4155 18.7347 5.61263 68.0536 0.000873959 4.26108 0.0171699 0.12144 5.34997 0 0 g 0 0 0 0 0 0 0 23.8467 22.9518 26.3212 33.9544 1.27162 0.211723 63.4037 72.6319 0.00443454 52.305 0 0 t 0 0 0 0 0 0 0 26.3546 27.7545 24.0558 20.1866 15.3374 10.8865 11.0179 13.402 88.3819 21.9133 0 0

M05963_2.00_rc_shift7 (M05963_2.00_rc)
; positions_6nt_m5 versus M05963_2.00_rc; m=229/244; ncol2=10; w=-2; offset=-2; strand=R; shift=7; score=0.480029; -------GGhkCAGGTG-- ; cor=; Ncor= a 0 0 0 0 0 0 0 9.09091 8.33333 33.3333 0 0 100 0 0 0 0 0 0 c 0 0 0 0 0 0 0 9.09091 0 33.3333 0 100 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 72.7273 83.3333 8.33333 66.6667 0 0 100 100 0 100 0 0 t 0 0 0 0 0 0 0 9.09091 8.33333 25 33.3333 0 0 0 0 100 0 0 0

M08190_2.00_rc_shift11 (ZEB1_rc)
; positions_6nt_m5 versus M08190_2.00_rc (ZEB1_rc); m=230/244; ncol2=10; w=0; offset=2; strand=R; shift=11; score=0.469481; -----------CAGGTGtG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 100 2.9851 1.99 0 2.9851 23.8806 6.4677 c 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 11.4428 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 97.0149 98.01 0 94.0298 0 93.5323 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 2.9851 64.6766 0

M03611_2.00_rc_shift6 (M03611_2.00_rc)
; positions_6nt_m5 versus M03611_2.00_rc; m=231/244; ncol2=16; w=-3; offset=-3; strand=R; shift=6; score=0.465852; ------ggrCrCAGCTGrk ; cor=; Ncor= a 0 0 0 0 0 0 22.2581 18.3338 34.669 6.65291 26.8937 0 99.3009 0.926784 19.189 1.7554 0.0292569 45.6752 1.12233 c 0 0 0 0 0 0 8.35777 8.8589 18.1328 87.9061 11.3273 100 0.61171 13.0677 69.8136 0 0 13.5753 4.78863 g 0 0 0 0 0 0 48.1525 56.2335 30.9468 2.11449 52.0732 0 0.0873871 78.9852 10.2396 0.143885 99.7367 34.6689 30.3217 t 0 0 0 0 0 0 21.2317 16.5738 16.2514 3.32646 9.70581 0 0 7.02039 0.757731 98.1007 0.234055 6.0806 63.7673

M08722_2.00_shift1 (TWIST1,TWIST2)
; positions_6nt_m5 versus M08722_2.00 (TWIST1,TWIST2); m=232/244; ncol2=17; w=-8; offset=-8; strand=D; shift=1; score=0.465099; -wAATkrrwwmCAGATGk- ; cor=; Ncor= a 0 27.163 68.8129 89.7384 7.04225 11.2676 48.8934 49.6982 54.9296 54.7284 29.3763 2.41449 99.1952 2.01207 72.4346 2.8169 3.21932 7.04225 0 c 0 3.62173 3.42052 5.23139 8.85312 16.0966 9.05433 11.8712 7.04225 8.65191 53.5211 96.7807 0.201207 8.04829 18.3099 3.42052 2.8169 15.493 0 g 0 3.62173 18.5111 3.42052 5.6338 29.1751 36.0161 26.7606 9.45674 7.44467 14.4869 0.804829 0.402414 70.2213 8.2495 1.40845 86.9215 26.7606 0 t 0 65.5936 9.25553 1.60966 78.4708 43.4608 6.03622 11.67 28.5714 29.1751 2.61569 0 0.201207 19.7183 1.00604 92.3541 7.04225 50.7042 0

M08766_2.00_shift1 (TWIST2)
; positions_6nt_m5 versus M08766_2.00 (TWIST2); m=233/244; ncol2=17; w=-8; offset=-8; strand=D; shift=1; score=0.457243; -wAATkrrwwmCAGmTGk- ; cor=; Ncor= a 0 25.4 69.8 85.4 6.2 12.6 48.4 48.4 54 56.2 25.8 1.4 99 0.8 66 3.2 1.8 8.8 0 c 0 7.2 3.4 7.6 6.4 21.4 11.6 12.4 8 9 60.2 98.4 0 9.8 25.8 4.6 3.2 18.2 0 g 0 4.6 16.4 4 5.8 28.8 34 29 10 7.2 12.4 0.2 0.2 68 6.4 2 89.6 28.2 0 t 0 62.8 10.4 3 81.6 37.2 6 10.2 28 27.6 1.6 0 0.8 21.4 1.8 90.2 5.4 44.8 0

M09795_2.00_rc_shift6 (TCF3_rc)
; positions_6nt_m5 versus M09795_2.00_rc (TCF3_rc); m=234/244; ncol2=16; w=-3; offset=-3; strand=R; shift=6; score=0.455832; ------awkmrCAGGTGtT ; cor=; Ncor= a 0 0 0 0 0 0 41.4141 31 17 50 50 0 100 0 0 0 0 0 20 c 0 0 0 0 0 0 24.2424 24 17 26 14 100 0 5 16 0 0 24 3 g 0 0 0 0 0 0 17.1717 14 30 7 33 0 0 92 84 0 100 13 8 t 0 0 0 0 0 0 17.1717 31 36 17 3 0 0 3 0 100 0 63 69

M08203_2.00_shift12 (GATA1)
; positions_6nt_m5 versus M08203_2.00 (GATA1); m=235/244; ncol2=10; w=0; offset=3; strand=D; shift=12; score=0.454467; ------------wGATrwy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 66.0377 0 100 0 36.7925 29.2453 17.9245 c 0 0 0 0 0 0 0 0 0 0 0 0 4.717 0 0 0 16.9811 16.0377 25.4717 g 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 25.4717 21.6981 14.1509 t 0 0 0 0 0 0 0 0 0 0 0 0 29.2453 0 0 100 20.7547 33.0189 42.4528

M03610_2.00_shift6 (M03610_2.00)
; positions_6nt_m5 versus M03610_2.00; m=236/244; ncol2=16; w=-3; offset=-3; strand=D; shift=6; score=0.446161; ------rgcAyCAGCTGrT ; cor=; Ncor= a 0 0 0 0 0 0 29.304 24.1758 4.20933 70.8171 5.00736 0.364964 99.8172 0 7.16511 0 0 34.3434 0.768246 c 0 0 0 0 0 0 9.89011 3.663 62.116 23.476 42.1208 99.635 0 4.82529 85.0467 0.182815 0 16.8831 4.86556 g 0 0 0 0 0 0 41.5751 66.1172 19.5677 5.70687 14.5803 0 0.182815 90.8486 7.6324 0 99.8172 44.4444 24.4558 t 0 0 0 0 0 0 19.2308 6.04396 14.1069 0 38.2916 0 0 4.32612 0.155763 99.8172 0.182815 4.329 69.9104

M07965_2.00_rc_shift10 (GATA3_rc)
; positions_6nt_m5 versus M07965_2.00_rc (GATA3_rc); m=237/244; ncol2=15; w=0; offset=1; strand=R; shift=10; score=0.443674; ----------rswGATksy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 43.299 11.3402 60.8248 1.0309 94.8453 0 7.2165 13.4021 16.4948 c 0 0 0 0 0 0 0 0 0 0 15.4639 44.3299 0 5.15461 3.0928 0 19.5876 41.2371 37.1134 g 0 0 0 0 0 0 0 0 0 0 27.8351 31.9588 1.0309 93.8145 0 0 31.9588 25.7732 0 t 0 0 0 0 0 0 0 0 0 0 13.4021 12.3711 38.1443 0 2.0619 100 41.2371 19.5876 46.3918

M08206_2.00_rc_shift12 (M08206_2.00_rc)
; positions_6nt_m5 versus M08206_2.00_rc; m=238/244; ncol2=11; w=0; offset=3; strand=R; shift=12; score=0.439836; ------------AGATbht ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 78.8732 0 100 0 1.4085 25.3521 21.1268 c 0 0 0 0 0 0 0 0 0 0 0 0 4.2254 0 0 0 29.5775 28.169 18.3099 g 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 38.0282 21.1268 5.6338 t 0 0 0 0 0 0 0 0 0 0 0 0 16.9014 0 0 100 30.9859 25.3521 54.9295

M08268_2.00_rc_shift5 (ZNF273_rc)
; positions_6nt_m5 versus M08268_2.00_rc (ZNF273_rc); m=239/244; ncol2=17; w=-4; offset=-4; strand=R; shift=5; score=0.438255; -----marbaGCAGCTGyt ; cor=; Ncor= a 0 0 0 0 0 32.5117 38.185 27.0004 6.9057 47.0078 15.4837 0.9867 95.7687 0.6801 5.584 2.9552 0.8753 7.9051 10.3546 c 0 0 0 0 0 38.869 18.8163 16.424 29.1366 17.0592 8.7952 97.4185 1.0225 12.5541 75.7604 0.9797 0.6928 44.639 22.6037 g 0 0 0 0 0 14.0477 21.1391 36.646 32.4094 24.1901 71.3356 0.9398 1.1719 81.4713 17.9387 0.9431 96.8608 18.0389 19.9152 t 0 0 0 0 0 14.5717 21.8597 19.9296 31.5482 11.7429 4.3855 0.6551 2.0369 5.2946 0.7169 95.122 1.571 29.4171 47.1265

M08745_2.00_shift3 (M08745_2.00)
; positions_6nt_m5 versus M08745_2.00; m=240/244; ncol2=15; w=-6; offset=-6; strand=D; shift=3; score=0.43184; ---grcrggrrCAGsTGc- ; cor=; Ncor= a 0 0 0 19.8 38 17.4 49 22.4 22.8 47.8 65.8 0 99.8 0.6 3.4 0 0 11.4 0 c 0 0 0 15.4 17.4 42.4 9.6 10 23.6 6.8 5 100 0 0.8 66.2 0 0 41.2 0 g 0 0 0 51.6 33 22.2 30 60 36.6 44.8 29 0 0 97.8 30 0.2 99.8 23.8 0 t 0 0 0 13.2 11.6 18 11.4 7.6 17 0.6 0.2 0 0.2 0.8 0.4 99.8 0.2 23.6 0

M08724_2.00_shift3 (MYOD1)
; positions_6nt_m5 versus M08724_2.00 (MYOD1); m=241/244; ncol2=15; w=-6; offset=-6; strand=D; shift=3; score=0.424951; ---grcarsrrCAGCTGc- ; cor=; Ncor= a 0 0 0 20 33.4 21.4 45.2 25.2 20.8 50.8 57 0.2 99.4 1 1.4 0.6 0 13.4 0 c 0 0 0 13.2 22.2 49.6 17 10.8 29.2 6 3.8 99.4 0 0 75 0 0.2 40.8 0 g 0 0 0 51.4 39.6 16 23.4 57.4 33.4 42 39.2 0.4 0.4 98 22.8 0 99.2 23.8 0 t 0 0 0 15.4 4.8 13 14.4 6.6 16.6 1.2 0 0 0.2 1 0.8 99.4 0.6 22 0

M09554_2.00_rc_shift10 (M09554_2.00_rc)
; positions_6nt_m5 versus M09554_2.00_rc; m=242/244; ncol2=15; w=0; offset=1; strand=R; shift=10; score=0.422742; ----------rcwGATwry ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 27.5 23.9 61.7 0.1 99.7 0.1 30.1 33.4 18.6 c 0 0 0 0 0 0 0 0 0 0 20.4 29.9 0.1 0.1 0.1 0.1 23.4 20.2 29.7 g 0 0 0 0 0 0 0 0 0 0 27.6 23.4 0.1 99.7 0.1 0.1 18.6 28 20.9 t 0 0 0 0 0 0 0 0 0 0 24.5 22.8 38.1 0.1 0.1 99.7 27.9 18.4 30.8

M04149_2.00_shift9 (NEUROD1,NEUROD4,NEUROD6)
; positions_6nt_m5 versus M04149_2.00 (NEUROD1,NEUROD4,NEUROD6); m=243/244; ncol2=19; w=0; offset=0; strand=D; shift=9; score=0.408513; ---------rvCATATGky ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 46.5116 40 2.22222 95.5556 0 97.7273 2.27273 2.22222 0 0 c 0 0 0 0 0 0 0 0 0 2.32558 28.8889 95.5556 0 0 0 0 0 18.1818 62.7907 g 0 0 0 0 0 0 0 0 0 51.1628 31.1111 2.22222 2.22222 6.52174 0 0 95.5556 31.8182 0 t 0 0 0 0 0 0 0 0 0 0 0 0 2.22222 93.4783 2.27273 97.7273 2.22222 50 37.2093

M04148_2.00_rc_shift0 (NEUROD1,NEUROD4,NEUROD6_rc)
; positions_6nt_m5 versus M04148_2.00_rc (NEUROD1,NEUROD4,NEUROD6_rc); m=244/244; ncol2=19; w=-9; offset=-9; strand=R; shift=0; score=0.400362; AAwTAssgyrmCATATGky ; cor=; Ncor= a 70.9247 92.1933 60 3.19693 76.0736 23.3871 16.9355 24.0591 4.30108 35.6662 42.3387 0 99.5984 0 98.9362 0.665779 0 1.07672 0.942127 c 8.96092 0.991326 0.134228 0.895141 3.68098 30.2419 35.2151 14.3817 51.0753 0.672948 47.043 99.3324 0.267738 0 1.06383 0.266312 0 12.2476 60.6999 g 3.81316 1.73482 0.134228 0.767263 8.89571 27.0161 27.8226 40.3226 18.2796 62.7187 10.4839 0.534045 0 1.19522 0 0 100 48.5868 0.538358 t 16.3012 5.08055 39.7315 95.1407 11.3497 19.3548 20.0269 21.2366 26.3441 0.942127 0.134409 0.133511 0.133869 98.8048 0 99.0679 0 38.0888 37.8197

One-to-n matrix alignment; reference matrix: positions_6nt_m2_shift5 ; 159 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
positions_6nt_m2_shift5 (positions_6nt_m2)
; positions_6nt_m2; m=0 (reference); ncol1=12; shift=5; ncol=17; -----ggcGTGGGAGgs ; Alignment reference a 0 0 0 0 0 2570 2849 1268 337 568 145 164 220 12227 416 2583 2989 c 0 0 0 0 0 3388 3118 9371 778 833 206 183 381 437 783 3075 3594 g 0 0 0 0 0 5177 6121 1784 12478 1543 13403 13190 13126 791 12196 5915 5045 t 0 0 0 0 0 2739 1786 1451 281 10930 120 337 147 419 479 2301 2246

M09515_2.00_rc_shift5 (M09515_2.00_rc)
; positions_6nt_m2 versus M09515_2.00_rc; m=1/158; ncol2=12; w=0; offset=0; strand=R; shift=5; score=0.873762; -----tgyGTGGGyGkg ; cor=; Ncor= a 0 0 0 0 0 21.6 11.4 15.8 0.1 0.1 5.5 0.1 0.1 15.9 3.2 9.2 24.8 c 0 0 0 0 0 23.1 18.2 55.2 0.1 0.1 0.1 0.1 0.1 58.7 0.1 6.6 19.2 g 0 0 0 0 0 23.1 67.8 3.5 99.7 13.7 94.3 99.7 99.7 0.1 95.3 51.3 35.7 t 0 0 0 0 0 32.2 2.6 25.5 0.1 86.1 0.1 0.1 0.1 25.3 1.4 32.9 20.4

M04438_2.00_rc_shift4 (EGR1_rc)
; positions_6nt_m2 versus M04438_2.00_rc (EGR1_rc); m=2/158; ncol2=13; w=-1; offset=-1; strand=R; shift=4; score=0.786887; ----gkgcGkGGGyGkg ; cor=; Ncor= a 0 0 0 0 20.8587 14.8472 17.4723 21.1943 3.85178 6.38239 14.4003 2.40275 2.46294 16.3718 11.7565 13.8739 22.7838 c 0 0 0 0 14.6341 21.4782 8.17388 42.2063 0 6.24303 4.40227 2.746 0.908656 46.4378 2.55749 10.4727 16.2306 g 0 0 0 0 44.6646 31.813 66.0792 13.8829 95.9776 32.5111 77.0299 90.0915 94.1416 7.48997 78.0531 47.1176 41.1735 t 0 0 0 0 19.8425 31.8616 8.27459 22.7166 0.170648 54.8634 4.16748 4.75973 2.48685 29.7004 7.63283 28.5357 19.812

M04437_2.00_rc_shift4 (EGR1_rc)
; positions_6nt_m2 versus M04437_2.00_rc (EGR1_rc); m=3/158; ncol2=13; w=-1; offset=-1; strand=R; shift=4; score=0.774798; ----kkGcGkGGGyGkg ; cor=; Ncor= a 0 0 0 0 18.4651 15.9295 12.7152 9.27571 1.13232 2.7412 15.9639 1.97429 0.973352 11.2721 10.654 12.6488 19.5474 c 0 0 0 0 15.2345 21.9221 5.01722 60.1638 0.210288 4.23373 1.0414 1.72942 0.191479 48.8111 6.11728 12.5506 15.8413 g 0 0 0 0 40.7019 25.5198 74.9754 13.0649 98.625 33.5479 77.4321 93.3119 97.2874 8.67825 73.5642 41.6636 39.8983 t 0 0 0 0 25.5986 36.6286 7.29218 17.4956 0.032352 59.4771 5.56261 2.98439 1.54779 31.2385 9.66458 33.137 24.713

M05860_2.00_rc_shift5 (M05860_2.00_rc)
; positions_6nt_m2 versus M05860_2.00_rc; m=4/158; ncol2=13; w=0; offset=0; strand=R; shift=5; score=0.772141; -----tGCGkGGGCGkr ; cor=; Ncor= a 0 0 0 0 0 14.5 17.5 13.1 0.1 0.1 7.7 0.1 0.1 7.6 4.6 7.3 27.9 c 0 0 0 0 0 22.2 7.5 71 0.1 0.2 0.1 0.1 0.1 69.5 0.9 8.6 19.3 g 0 0 0 0 0 22.3 71.6 3.2 99.8 35.1 92.1 99.8 99.7 0.7 93.5 51.5 31.8 t 0 0 0 0 0 41 3.5 12.8 0.1 64.5 0.1 0.1 0.1 22.2 1 32.6 21

M04439_2.00_rc_shift4 (EGR2_rc)
; positions_6nt_m2 versus M04439_2.00_rc (EGR2_rc); m=5/158; ncol2=13; w=-1; offset=-1; strand=R; shift=4; score= 0.7662; ----gtGCGTGGGyGkk ; cor=; Ncor= a 0 0 0 0 21.3887 15.9033 10.9842 10.3249 0.151822 0 20.8826 0 0 9.74659 3.26296 10.5732 21.186 c 0 0 0 0 14.9518 23.4097 1.53779 71.2274 0 0.174368 0.197006 0 0.252781 64.1001 1.53551 5.64756 12.367 g 0 0 0 0 39.7364 18.8507 86.6872 2.85199 99.8482 13.8187 77.7384 99.7977 99.7472 1.00715 94.6737 43.3121 40.446 t 0 0 0 0 23.923 41.8363 0.790861 15.5957 0 86.007 1.18203 0.202327 0 25.1462 0.527831 40.4671 26.001

M00249_2.00_rc_shift5 (WT1_rc)
; positions_6nt_m2 versus M00249_2.00_rc (WT1_rc); m=6/158; ncol2=11; w=0; offset=0; strand=R; shift=5; score=0.764073; -----tgyGGGGGrGk- ; cor=; Ncor= a 0 0 0 0 0 22.5335 15.2561 5.13927 0.022935 0.022935 0.022935 0.022935 0.022935 62.5481 9.76681 19.8837 0 c 0 0 0 0 0 22.5335 15.2561 53.5748 0.022935 0.022935 0.022935 0.022935 0.022935 2.48942 9.76681 19.8837 0 g 0 0 0 0 0 22.5335 54.2316 15.4144 99.9312 90.2485 99.9312 99.9312 99.9312 32.473 70.6996 29.4673 0 t 0 0 0 0 0 32.3995 15.2561 25.8716 0.022935 9.70563 0.022935 0.022935 0.022935 2.48942 9.76681 30.7654 0

M09020_2.00_rc_shift5 (RBPJ_rc)
; positions_6nt_m2 versus M09020_2.00_rc (RBPJ_rc); m=7/158; ncol2=11; w=0; offset=0; strand=R; shift=5; score=0.745308; -----rsysTGGGAAm- ; cor=; Ncor= a 0 0 0 0 0 31.6 3.8 5.2 6.4 16.2 2 21 5.4 98.4 75.8 41.6 0 c 0 0 0 0 0 18 29.6 48.6 31.4 9 0.2 0.8 0.4 0.6 1.8 31.6 0 g 0 0 0 0 0 36 48 21.2 60.2 2.6 95.8 73 94 0.8 21.2 22.2 0 t 0 0 0 0 0 14.4 18.6 25 2 72.2 2 5.2 0.2 0.2 1.2 4.6 0

M08994_2.00_rc_shift5 (M08994_2.00_rc)
; positions_6nt_m2 versus M08994_2.00_rc; m=8/158; ncol2=14; w=0; offset=0; strand=R; shift=5; score=0.743229; -----kGyGKGGGyGGr ; cor=; Ncor= a 0 0 0 0 0 13.8 9.4 22.2 2 0.8 6.2 0.2 0.2 24.8 2.8 7.2 25.2 c 0 0 0 0 0 14.2 13.4 39.8 1.2 1.4 0.4 0.4 1.8 41.8 1.6 0.8 9.6 g 0 0 0 0 0 41.8 72.8 6.8 95 29.6 92.6 98.4 98 1.4 92.4 73 54.2 t 0 0 0 0 0 30.2 4.4 31.2 1.8 68.2 0.8 1 0 32 3.2 19 11

M04462_2.00_rc_shift4 (EGR4_rc)
; positions_6nt_m2 versus M04462_2.00_rc (EGR4_rc); m=9/158; ncol2=13; w=-1; offset=-1; strand=R; shift=4; score=0.742164; ----gtGCGKGGGCGkr ; cor=; Ncor= a 0 0 0 0 21.8737 5.13409 6.65641 7.31812 0 0.250391 4.08555 0.0143143 0.157255 6.48591 1.07012 2.96826 28.9459 c 0 0 0 0 8.738 22.6933 2.70617 74.7991 0.0143225 1.14763 0.205648 0 0.0428878 83.3851 0 1.09935 10.169 g 0 0 0 0 45.2371 14.9184 89.5344 1.82149 99.9857 25.7694 95.7088 99.9284 99.7999 0.322504 98.2963 56.974 42.2801 t 0 0 0 0 24.1513 57.2542 1.10299 16.0613 0 72.8326 0 0.0572574 0 9.8065 0.633624 38.9584 18.605

M04440_2.00_rc_shift4 (EGR2_rc)
; positions_6nt_m2 versus M04440_2.00_rc (EGR2_rc); m=10/158; ncol2=13; w=-1; offset=-1; strand=R; shift=4; score=0.738567; ----kyGyGTGGGCGkd ; cor=; Ncor= a 0 0 0 0 23.7347 5.45996 14.1844 13.0029 0 0 4.26829 0.289101 0.260116 3.3977 0.911941 4.05257 28.5922 c 0 0 0 0 12.9727 29.7981 6.17708 59.368 0 0 0.332594 0 0.0289017 84.0381 0.427472 1.80723 14.6015 g 0 0 0 0 35.8639 7.85903 78.6548 0.138145 99.9709 1.2069 95.2882 99.3929 99.3642 0.342215 97.9766 51.7798 30.7155 t 0 0 0 0 27.4287 56.8829 0.983757 27.4909 0.0290782 98.7931 0.110865 0.318011 0.346821 12.222 0.683956 42.3604 26.0908

M08358_2.00_rc_shift5 (ZNF467_rc)
; positions_6nt_m2 versus M08358_2.00_rc (ZNF467_rc); m=11/158; ncol2=12; w=0; offset=0; strand=R; shift=5; score=0.731498; -----GGrGGGGGAGGG ; cor=; Ncor= a 0 0 0 0 0 7.13351 12.3691 36.1911 23.3639 15.5105 9.48953 5.03927 10.7984 99.0183 0.065445 11.322 20.2225 c 0 0 0 0 0 0.065445 5.03927 10.2749 1.63613 0.065445 1.11257 0.065445 3.46859 0.850785 0.065445 0.065445 4.25393 g 0 0 0 0 0 92.7356 79.6466 34.8822 73.6257 84.3586 89.3325 93.5209 85.6675 0.065445 99.8037 87.7618 74.411 t 0 0 0 0 0 0.065445 2.94503 18.6518 1.37435 0.065445 0.065445 1.37435 0.065445 0.065445 0.065445 0.850785 1.11257

M06073_2.00_rc_shift4 (M06073_2.00_rc)
; positions_6nt_m2 versus M06073_2.00_rc; m=12/158; ncol2=14; w=-1; offset=-1; strand=R; shift=4; score=0.725327; ----kkgyGkGGGyGkg ; cor=; Ncor= a 0 0 0 0 19.936 13.3593 15.4833 9.32421 0 2.52352 15.0556 0 0 12.2754 5.73139 8.89649 23.6099 c 0 0 0 0 15.5464 20.882 9.83747 46.1078 0 0.25663 0 0 0 51.0693 3.84944 6.97177 15.0128 g 0 0 0 0 38.9118 25.4215 59.0248 13.6869 99.6578 29.8118 83.2763 100 98.3747 3.89222 81.9076 47.6476 37.3824 t 0 0 0 0 25.6059 40.3372 15.6544 30.8811 0.342173 67.408 1.66809 0 1.62532 32.763 8.51155 36.4842 23.9949

M05849_2.00_rc_shift5 (ZNF282_rc)
; positions_6nt_m2 versus M05849_2.00_rc (ZNF282_rc); m=13/158; ncol2=11; w=0; offset=0; strand=R; shift=5; score=0.723182; -----GGTGtGGGAkg- ; cor=; Ncor= a 0 0 0 0 0 8.9109 0 2.9703 0 13.8614 0 0 0 83.1683 9.901 24.7525 0 c 0 0 0 0 0 0 0 2.9703 3.9604 24.7525 0.9901 0 0.9901 4.9505 3.9604 10.8911 0 g 0 0 0 0 0 77.2277 100 24.7525 96.0396 6.9307 99.0099 100 90.099 1.9802 41.5842 45.5446 0 t 0 0 0 0 0 13.8614 0 69.3069 0 54.4554 0 0 8.9109 9.901 44.5545 18.8119 0

M00776_2.00_rc_shift6 (M00776_2.00_rc)
; positions_6nt_m2 versus M00776_2.00_rc; m=14/158; ncol2=10; w=0; offset=1; strand=R; shift=6; score=0.723067; ------rcGkGGGcgk- ; cor=; Ncor= a 0 0 0 0 0 0 26.0804 15.8074 3.33468 4.67074 16.6074 0.67684 2.91396 18.1051 18.6815 19.5589 0 c 0 0 0 0 0 0 13.3455 55.1731 2.25777 5.37263 1.29673 5.58274 0.00744296 49.2146 9.27695 12.2243 0 g 0 0 0 0 0 0 46.117 7.03203 92.2383 27.6968 79.0315 91.8062 89.078 8.72499 56.1223 40.1824 0 t 0 0 0 0 0 0 14.4571 21.9875 2.16924 62.2598 3.06438 1.93417 8.00057 23.9553 15.9193 28.0343 0

M04461_2.00_rc_shift4 (EGR4_rc)
; positions_6nt_m2 versus M04461_2.00_rc (EGR4_rc); m=15/158; ncol2=13; w=-1; offset=-1; strand=R; shift=4; score=0.717655; ----kTGCGTGGGCGkg ; cor=; Ncor= a 0 0 0 0 21.4658 5.052 1.69235 1.1206 0.0385431 0.144974 4.12123 0.0674699 0.03861 2.87402 0.985595 3.2418 24.8286 c 0 0 0 0 9.72383 13.9896 0.264725 95.1226 0.0192715 0.209407 0.0646831 0.115663 0 91.2986 0.15163 1.65304 8.91357 g 0 0 0 0 39.0498 8.1928 97.9106 0.597042 99.788 16.2371 95.694 99.8169 99.9614 0.343824 98.1425 51.0423 45.2245 t 0 0 0 0 29.7605 72.7656 0.132363 3.15973 0.154172 83.4085 0.120126 0 0 5.48356 0.720243 44.0628 21.0333

M04584_2.00_rc_shift4 (EGR3_rc)
; positions_6nt_m2 versus M04584_2.00_rc (EGR3_rc); m=16/158; ncol2=13; w=-1; offset=-1; strand=R; shift=4; score=0.712539; ----dYGCGTGGGCGkd ; cor=; Ncor= a 0 0 0 0 26.5361 2.30035 5.0657 11.518 0 0 2.96371 0 0.0414852 1.24598 0.228263 0.7848 26.2029 c 0 0 0 0 7.72756 25.6944 3.10417 68.9645 0.0415455 0.0202511 0.120968 0 0.0829703 96.5032 0.124507 0.0413052 13.5597 g 0 0 0 0 35.6176 2.53183 91.4492 0.832974 99.7507 2.7339 96.8145 99.9584 99.6059 0.542605 99.6472 58.1371 30.5978 t 0 0 0 0 30.1187 69.4734 0.38088 18.6845 0.207727 97.2458 0.100806 0.041632 0.269654 1.7082 0 41.0368 29.6397

M02885_2.00_rc_shift5 (EGR2_rc)
; positions_6nt_m2 versus M02885_2.00_rc (EGR2_rc); m=17/158; ncol2=11; w=0; offset=0; strand=R; shift=5; score=0.712265; -----tGCGTGGGCGk- ; cor=; Ncor= a 0 0 0 0 0 15.035 6.67053 3.9666 1.4393 0.0875274 15.5356 0.809465 1.79234 5.22599 4.41889 6.85328 0 c 0 0 0 0 0 18.951 1.16009 93.5746 0.125156 1.13786 2.13124 0.933998 1.54512 87.8296 1.69492 4.53668 0 g 0 0 0 0 0 5.48951 91.9374 0 98.4355 4.814 82.3331 96.7621 96.2917 0 93.8862 32.7703 0 t 0 0 0 0 0 60.5245 0.232019 2.45883 0 93.9606 0 1.4944 0.370828 6.94444 0 55.8398 0

M00778_2.00_rc_shift5 (M00778_2.00_rc)
; positions_6nt_m2 versus M00778_2.00_rc; m=18/158; ncol2=10; w=0; offset=0; strand=R; shift=5; score=0.711675; -----tgCGKGGGcg-- ; cor=; Ncor= a 0 0 0 0 0 19.2321 22.9021 8.72729 0.333163 0.819549 7.03931 0.0388368 0.829957 14.3468 18.4814 0 0 c 0 0 0 0 0 21.9021 8.0143 74.1771 0.0424629 0.836105 0.206286 0.23731 0.255028 63.6582 5.56648 0 0 g 0 0 0 0 0 16.064 62.2543 4.33385 99.5715 25.3049 91.9744 99.6449 95.93 3.20121 65.8094 0 0 t 0 0 0 0 0 42.8018 6.82934 12.7618 0.052912 73.0394 0.779978 0.0789937 2.98506 18.7938 10.1428 0 0

M04583_2.00_rc_shift4 (EGR3_rc)
; positions_6nt_m2 versus M04583_2.00_rc (EGR3_rc); m=19/158; ncol2=13; w=-1; offset=-1; strand=R; shift=4; score=0.711146; ----ktGCGTGGGCGkk ; cor=; Ncor= a 0 0 0 0 23.2693 10.1071 2.96803 2.09352 0.0559268 0.0164577 17.0691 0.0147314 0.0265315 1.73925 0 1.43841 23.8873 c 0 0 0 0 11.7041 17.1504 0 93.5178 0.0677008 0 0.0171254 0.0530332 0.0619067 92.4505 0 0.168541 11.9702 g 0 0 0 0 38.6503 9.8676 96.9118 0.331428 99.6674 7.107 82.8379 99.7614 99.8172 0.319454 99.9203 45.5584 37.4878 t 0 0 0 0 26.3763 62.8749 0.12021 4.05723 0.208989 92.8765 0.075841 0.170885 0.0943341 5.49078 0.0796766 52.8347 26.6547

M00233_2.00_rc_shift5 (EGR2_rc)
; positions_6nt_m2 versus M00233_2.00_rc (EGR2_rc); m=20/158; ncol2=10; w=0; offset=0; strand=R; shift=5; score=0.702666; -----trcGkGGGyg-- ; cor=; Ncor= a 0 0 0 0 0 23.3789 26.1475 18.1082 5.10483 5.03412 20.4162 0.675269 5.99273 22.2798 20.4075 0 0 c 0 0 0 0 0 21.1541 14.2073 49.2231 1.9159 5.4534 2.26218 2.99623 2.18267 43.9776 11.6569 0 0 g 0 0 0 0 0 19.5277 47.1698 11.205 90.034 40.2955 71.9757 95.3311 80.6845 8.11473 50.1942 0 0 t 0 0 0 0 0 35.9394 12.4753 21.4637 2.94523 49.217 5.34589 0.99736 11.1401 25.6279 17.7414 0 0

M08996_2.00_rc_shift4 (M08996_2.00_rc)
; positions_6nt_m2 versus M08996_2.00_rc; m=21/158; ncol2=14; w=-1; offset=-1; strand=R; shift=4; score=0.699377; ----gkGcGkGGGcGGr ; cor=; Ncor= a 0 0 0 0 22.7642 13.6179 5.0813 15.4472 0.203252 0.406504 3.45528 0 0 14.8374 0 2.43902 26.2195 c 0 0 0 0 19.3089 17.2764 3.86179 67.0732 0 0.203252 0.203252 0.406504 0 61.1789 0.609756 2.84553 8.53659 g 0 0 0 0 47.1545 33.9431 89.6341 1.21951 98.7805 54.4715 96.3415 98.9837 100 0 98.9837 77.8455 54.878 t 0 0 0 0 10.7724 35.1626 1.42276 16.2602 1.01626 44.9187 0 0.609756 0 23.9837 0.406504 16.8699 10.3659

M09506_2.00_rc_shift5 (EGR1_rc)
; positions_6nt_m2 versus M09506_2.00_rc (EGR1_rc); m=22/158; ncol2=10; w=0; offset=0; strand=R; shift=5; score=0.69553; -----tGyGKGGGyG-- ; cor=; Ncor= a 0 0 0 0 0 12.8 7.8 15.4 0.1 0.1 2.7 0.1 0.1 15.3 3.4 0 0 c 0 0 0 0 0 7.2 3.6 52.3 0.1 0.1 0.1 0.2 0.1 41.5 0.2 0 0 g 0 0 0 0 0 14.2 88.2 2.3 99.7 28.2 97.1 97.3 99.7 1 94 0 0 t 0 0 0 0 0 65.8 0.4 30 0.1 71.6 0.1 2.4 0.1 42.2 2.4 0 0

M08107_2.00_shift6 (E2F6)
; positions_6nt_m2 versus M08107_2.00 (E2F6); m=23/158; ncol2=11; w=0; offset=1; strand=D; shift=6; score=0.681252; ------rGGCGGGArrv ; cor=; Ncor= a 0 0 0 0 0 0 29.4523 16.0319 0 24.3743 0.253899 0 0.725426 100 61.1534 35.8361 27.9652 c 0 0 0 0 0 0 2.9017 14.7262 0 70.8741 0 0 1.05187 0 0 16.4672 25.6075 g 0 0 0 0 0 0 50.9975 69.2419 100 0 99.7461 100 98.2227 0 38.8466 41.1679 32.9706 t 0 0 0 0 0 0 16.6485 0 0 4.75154 0 0 0 0 0 6.52884 13.4567

M07941_2.00_shift5 (E2F6)
; positions_6nt_m2 versus M07941_2.00 (E2F6); m=24/158; ncol2=11; w=0; offset=0; strand=D; shift=5; score=0.680524; -----gggGCGGGArr- ; cor=; Ncor= a 0 0 0 0 0 20.7031 22.2656 13.6719 0 8.20311 0 0 0 100 64.4531 37.1094 0 c 0 0 0 0 0 21.875 7.03121 22.6562 0 84.7657 0 0 0 0 0 14.4531 0 g 0 0 0 0 0 35.1562 51.5626 63.6719 100 0 99.6094 100 99.2188 0 35.5469 39.8438 0 t 0 0 0 0 0 22.2656 19.1406 0 0 7.03121 0.3906 0 0.7812 0 0 8.59379 0

M06072_2.00_rc_shift4 (M06072_2.00_rc)
; positions_6nt_m2 versus M06072_2.00_rc; m=25/158; ncol2=14; w=-1; offset=-1; strand=R; shift=4; score=0.680043; ----kkrbGkGGGCGkk ; cor=; Ncor= a 0 0 0 0 21.0526 10.5263 31.5789 0 0 5.26316 0 0 0 10.5263 5.26316 0 5.26316 c 0 0 0 0 5.26316 5.26316 5.26316 42.1053 0 0 0 5.26316 0 73.6842 0 5.26316 21.0526 g 0 0 0 0 47.3684 26.3158 52.6316 26.3158 100 36.8421 100 94.7368 100 0 84.2105 47.3684 47.3684 t 0 0 0 0 26.3158 57.8947 10.5263 31.5789 0 57.8947 0 0 0 15.7895 10.5263 47.3684 26.3158

M09034_2.00_shift5 (E2F6)
; positions_6nt_m2 versus M09034_2.00 (E2F6); m=26/158; ncol2=13; w=0; offset=0; strand=D; shift=5; score=0.678594; -----rrGGCGGGArrr ; cor=; Ncor= a 0 0 0 0 0 33.8 26.2 15.4 1 21.4 4 2.4 7.2 94.2 51.2 38.4 27.8 c 0 0 0 0 0 14.8 3.4 12.6 1.6 70.8 1.8 4.8 4.4 3.2 3.6 10.8 21.8 g 0 0 0 0 0 34.2 55.6 70 96.4 1.2 89.4 89.6 87.2 1.4 43.6 43.8 37.8 t 0 0 0 0 0 17.2 14.8 2 1 6.6 4.8 3.2 1.2 1.2 1.6 7 12.6

M10216_2.00_rc_shift4 (EGR4_rc)
; positions_6nt_m2 versus M10216_2.00_rc (EGR4_rc); m=27/158; ncol2=12; w=-1; offset=-1; strand=R; shift=4; score=0.676152; ----wTGCGTGGGyGK- ; cor=; Ncor= a 0 0 0 0 52.6527 9.50951 1.9 5.7 0 0 24.1 0 0 9.4 0 2 0 c 0 0 0 0 0 9.50951 0 94.3 0 0 0 0 0 56.6 0 0 0 g 0 0 0 0 10.5105 7.10711 98.1 0 100 9.3 75.9 100 100 0 100 70 0 t 0 0 0 0 36.8368 73.8739 0 0 0 90.7 0 0 0 34 0 28 0

M07940_2.00_shift5 (E2F6)
; positions_6nt_m2 versus M07940_2.00 (E2F6); m=28/158; ncol2=11; w=0; offset=0; strand=D; shift=5; score=0.67485; -----gggGCGGGArr- ; cor=; Ncor= a 0 0 0 0 0 24.1379 24.5211 17.2414 0 12.6437 9.9617 0 0 100 60.5363 40.9962 0 c 0 0 0 0 0 24.5211 12.2605 20.6897 0 83.1417 0 0 0 0 2.2989 18.3908 0 g 0 0 0 0 0 32.9502 47.5096 62.0689 100 0 90.0383 100 100 0 37.1648 36.7816 0 t 0 0 0 0 0 18.3908 15.7088 0 0 4.2146 0 0 0 0 0 3.8314 0

M09021_2.00_rc_shift6 (M09021_2.00_rc)
; positions_6nt_m2 versus M09021_2.00_rc; m=29/158; ncol2=11; w=0; offset=1; strand=R; shift=6; score=0.666072; ------sysTGGGAAaa ; cor=; Ncor= a 0 0 0 0 0 0 10.2 6.8 9.4 6 0.4 13.4 1 86 90.4 49.8 41.4 c 0 0 0 0 0 0 33 45 39.6 2 1 0.4 2.6 1.2 0.4 19.6 21 g 0 0 0 0 0 0 35.4 21 41.4 3 95.6 75.8 96 12.2 6.4 19.8 23.2 t 0 0 0 0 0 0 21.4 27.2 9.6 89 3 10.4 0.4 0.6 2.8 10.8 14.4

M07939_2.00_shift5 (E2F6)
; positions_6nt_m2 versus M07939_2.00 (E2F6); m=30/158; ncol2=11; w=0; offset=0; strand=D; shift=5; score=0.664265; -----rrgGCGGGArr- ; cor=; Ncor= a 0 0 0 0 0 28.6713 28.3217 16.0839 0 13.986 0 0 0 100 66.7832 35.3147 0 c 0 0 0 0 0 22.7273 8.3916 18.8811 0 82.5175 0 0 2.0979 0 0 20.6294 0 g 0 0 0 0 0 29.021 47.9021 65.035 100 0 98.6014 100 97.9021 0 33.2168 34.2657 0 t 0 0 0 0 0 19.5804 15.3846 0 0 3.4965 1.3986 0 0 0 0 9.7902 0

M02883_2.00_rc_shift3 (EGR1_rc)
; positions_6nt_m2 versus M02883_2.00_rc (EGR1_rc); m=31/158; ncol2=14; w=-2; offset=-2; strand=R; shift=3; score=0.65772; ---wwTGCGkGGGCGka ; cor=; Ncor= a 0 0 0 40.2388 34.7081 10.7724 4 3.77566 0.130124 0.376884 6.2422 0.455729 1.22423 3.51951 1.93424 5.44135 35.5428 c 0 0 0 13.9668 12.5335 14.2276 1.1875 93.1818 0 0 0.93633 0 0.773196 85.4246 0.773694 3.62757 15.3967 g 0 0 0 19.055 24.8527 6.91057 93.8125 1.13636 99.5446 34.3593 92.8215 99.2839 98.0026 0.535578 96.9697 39.5405 24.1127 t 0 0 0 26.7394 27.9057 68.0894 1 1.90616 0.325309 65.2638 0 0.260417 0 10.5203 0.322373 51.3906 24.9478

M10188_2.00_rc_shift4 (EGR1_rc)
; positions_6nt_m2 versus M10188_2.00_rc (EGR1_rc); m=32/158; ncol2=12; w=-1; offset=-1; strand=R; shift=4; score=0.644555; ----wTGCGTRGGCGk- ; cor=; Ncor= a 0 0 0 0 45.4545 5.1 7.3 0 1.8 0 30.9 0 0 12.7 0 0 0 c 0 0 0 0 6.09391 2.6 0 98.2 0 1.8018 0 0 0 76.4 0 0 0 g 0 0 0 0 6.09391 5.1 92.7 0 98.2 14.5145 69.1 100 100 0 100 42.3 0 t 0 0 0 0 42.3576 87.2 0 1.8 0 83.6837 0 0 0 10.9 0 57.7 0

M02886_2.00_rc_shift3 (EGR2_rc)
; positions_6nt_m2 versus M02886_2.00_rc (EGR2_rc); m=33/158; ncol2=15; w=-2; offset=-2; strand=R; shift=3; score=0.638922; ---wdtGCGTGGGCGkd ; cor=; Ncor= a 0 0 0 33.2429 28.7835 13.5981 8.10398 4.0404 0.0713267 0.362903 14.7262 0.19559 0.2488 7.00017 1.33779 7.70861 31.6548 c 0 0 0 16.2628 13.1483 20.1279 0.30581 90.6865 0.249643 0.584677 0 0.302276 0.390972 82.3737 0.457666 2.33186 13.4922 g 0 0 0 23.396 30.5764 10.6025 91.2504 1.74628 99.679 11.2903 84.92 99.2176 99.2003 0.822562 97.3068 41.1833 28.5412 t 0 0 0 27.0983 27.4918 55.6715 0.339789 3.52679 0 87.7621 0.353833 0.284495 0.159943 9.80359 0.897729 48.7763 26.3117

M10279_2.00_rc_shift4 (EGR3_rc)
; positions_6nt_m2 versus M10279_2.00_rc (EGR3_rc); m=34/158; ncol2=12; w=-1; offset=-1; strand=R; shift=4; score=0.638081; ----vtGCGTrGGCGk- ; cor=; Ncor= a 0 0 0 0 30.3 17.0829 1.9 0 0 0 32.1 0 0 5.69431 0 2 0 c 0 0 0 0 27.3 7.29271 0 100 0 0 0 0 0 88.6114 0 0 0 g 0 0 0 0 27.3 9.79021 98.1 0 100 0 67.9 100 100 0 100 34 0 t 0 0 0 0 15.1 65.8342 0 0 0 100 0 0 0 5.69431 0 64 0

M10197_2.00_rc_shift4 (EGR2_rc)
; positions_6nt_m2 versus M10197_2.00_rc (EGR2_rc); m=35/158; ncol2=12; w=-1; offset=-1; strand=R; shift=4; score=0.633417; ----dTGCGTrGGCGk- ; cor=; Ncor= a 0 0 0 0 31.8 5.59441 3.7962 6.29371 0 0 37.5 0 0 5 1.2987 2.5974 0 c 0 0 0 0 9.1 3.6963 0 89.9101 0 0 0 0 0 82.5 0 2.5974 0 g 0 0 0 0 25 9.29071 96.2038 0 100 0 62.5 100 100 0 97.4026 44.8551 0 t 0 0 0 0 34.1 81.4186 0 3.7962 0 100 0 0 0 12.5 1.2987 49.95 0

M00375_2.00_rc_shift5 (M00375_2.00_rc)
; positions_6nt_m2 versus M00375_2.00_rc; m=36/158; ncol2=9; w=0; offset=0; strand=R; shift=5; score=0.632714; -----tgcGkgGGc--- ; cor=; Ncor= a 0 0 0 0 0 20.7941 24.1369 18.2918 6.19585 5.93243 21.454 3.77076 8.95779 21.8501 0 0 0 c 0 0 0 0 0 23.919 13.9258 48.7377 0.424807 5.15741 3.72814 9.1823 2.7802 41.026 0 0 0 g 0 0 0 0 0 21.0031 46.7 12.1393 91.2753 40.4649 67.0817 84.5445 74.6286 12.7331 0 0 0 t 0 0 0 0 0 34.2838 15.2373 20.8312 2.10408 48.4453 7.7362 2.50247 13.6334 24.3908 0 0 0

M09038_2.00_shift6 (M09038_2.00)
; positions_6nt_m2 versus M09038_2.00; m=37/158; ncol2=10; w=0; offset=1; strand=D; shift=6; score=0.627317; ------gsGCGGGArs- ; cor=; Ncor= a 0 0 0 0 0 0 18.6747 12.249 0.60241 7.42972 2.00803 0.401606 6.62651 98.3936 44.1767 20.8835 0 c 0 0 0 0 0 0 11.245 25.7028 2.40964 91.7671 3.01205 2.61044 1.00402 0.401606 8.43373 26.3052 0 g 0 0 0 0 0 0 57.0281 61.8474 95.3815 0 94.5783 96.1847 92.1687 0.803213 47.1888 47.1888 0 t 0 0 0 0 0 0 13.0522 0.200803 1.60643 0.803213 0.401606 0.803213 0.200803 0.401606 0.200803 5.62249 0

M09519_2.00_rc_shift7 (RBPJL_rc)
; positions_6nt_m2 versus M09519_2.00_rc (RBPJL_rc); m=38/158; ncol2=10; w=0; offset=2; strand=R; shift=7; score=0.625539; -------ysTGGGAAar ; cor=; Ncor= a 0 0 0 0 0 0 0 2.3 16.4 0.6 0.1 13.7 0.1 99.2 93.8 50 34.9 c 0 0 0 0 0 0 0 61.1 32.3 0.1 0.1 0.1 0.1 0.1 0.1 23.5 15.5 g 0 0 0 0 0 0 0 10.7 46.2 0.1 99.7 80 99.7 0.1 6 10.5 28.8 t 0 0 0 0 0 0 0 25.9 5.1 99.2 0.1 6.2 0.1 0.6 0.1 16 20.9

M02884_2.00_rc_shift3 (EGR1_rc)
; positions_6nt_m2 versus M02884_2.00_rc (EGR1_rc); m=39/158; ncol2=14; w=-2; offset=-2; strand=R; shift=3; score=0.622545; ---wdTGCGTGGGCGTw ; cor=; Ncor= a 0 0 0 46.3095 36.3415 1.97628 0.779844 0.0926784 0.0605694 0 2.02864 0.784077 0 0 0.366748 1.13852 38.2753 c 0 0 0 10.7738 6.34146 10.5402 0 99.9073 0 0.456026 0 0 0 98.1656 0.183374 0.189753 11.3999 g 0 0 0 12.5595 27.9268 1.31752 99.2202 0 99.9394 20 97.9714 99.2159 100 0 98.7775 24.9209 23.0951 t 0 0 0 30.3571 29.3902 86.166 0 0 0 79.544 0 0 0 1.83443 0.672372 73.7508 27.2298

M04564_2.00_rc_shift3 (GLIS1_rc)
; positions_6nt_m2 versus M04564_2.00_rc (GLIS1_rc); m=40/158; ncol2=15; w=-2; offset=-2; strand=R; shift=3; score=0.616249; ---kcktcGTGGGGGGt ; cor=; Ncor= a 0 0 0 18.0805 8.47896 21.7478 24.4131 8.8349 1.62338 1.25661 2.42272 0 0.507185 12.8241 0 2.39669 0.880503 c 0 0 0 8.99743 64.2071 6.67111 17.505 52.0707 3.00325 23.4788 0.417711 0.373692 0.507185 0.280308 0.337838 0 11.8868 g 0 0 0 46.4439 22.7832 39.7598 8.71898 15.7372 93.75 2.51323 96.7419 83.8565 98.9011 74.1416 98.7331 96.0331 22.327 t 0 0 0 26.4781 4.53074 31.8212 49.3628 23.3573 1.62338 72.7513 0.417711 15.7698 0.0845309 12.754 0.929054 1.57025 64.9057

M08866_2.00_rc_shift7 (SALL4_rc)
; positions_6nt_m2 versus M08866_2.00_rc (SALL4_rc); m=41/158; ncol2=10; w=0; offset=2; strand=R; shift=7; score=0.615603; -------gsdGGGwGgG ; cor=; Ncor= a 0 0 0 0 0 0 0 18 13.4 36 1.2 0.2 2 37.4 0.6 9.8 11.8 c 0 0 0 0 0 0 0 13.8 25.8 0.6 0.2 0.4 16.2 3 0.2 1.6 2.4 g 0 0 0 0 0 0 0 51.4 47.8 34.4 97.2 98.2 80.4 1 98.8 66 81.4 t 0 0 0 0 0 0 0 16.8 13 29 1.4 1.2 1.4 58.6 0.4 22.6 4.4

M08979_2.00_rc_shift7 (M08979_2.00_rc)
; positions_6nt_m2 versus M08979_2.00_rc; m=42/158; ncol2=10; w=0; offset=2; strand=R; shift=7; score=0.615603; -------gsdGGGwGgG ; cor=; Ncor= a 0 0 0 0 0 0 0 18 13.4 36 1.2 0.2 2 37.4 0.6 9.8 11.8 c 0 0 0 0 0 0 0 13.8 25.8 0.6 0.2 0.4 16.2 3 0.2 1.6 2.4 g 0 0 0 0 0 0 0 51.4 47.8 34.4 97.2 98.2 80.4 1 98.8 66 81.4 t 0 0 0 0 0 0 0 16.8 13 29 1.4 1.2 1.4 58.6 0.4 22.6 4.4

M07928_2.00_rc_shift3 (EGR1_rc)
; positions_6nt_m2 versus M07928_2.00_rc (EGR1_rc); m=43/158; ncol2=15; w=-2; offset=-2; strand=R; shift=3; score=0.614644; ---ggkGCGkGGGCGGr ; cor=; Ncor= a 0 0 0 20.8226 19.5373 15.9383 4.6272 7.45501 0 0 5.9126 0 0 4.3702 0.5141 6.1697 26.2211 c 0 0 0 23.6504 23.1362 22.108 1.7995 88.689 0 1.0283 0 0 0 88.1748 0 2.5707 19.7943 g 0 0 0 43.4447 47.0437 28.5347 93.3162 0 100 61.9537 94.0874 100 100 0 98.7147 76.3496 40.1028 t 0 0 0 12.0823 10.2828 33.419 0.2571 3.856 0 37.018 0 0 0 7.455 0.7712 14.91 13.8817

M08345_2.00_shift4 (GLIS1)
; positions_6nt_m2 versus M08345_2.00 (GLIS1); m=44/158; ncol2=14; w=-1; offset=-1; strand=D; shift=4; score=0.612998; ----ckcysyrGGrGGy ; cor=; Ncor= a 0 0 0 0 12.9293 17.3737 8.2828 8.2828 0.404 0 32.5253 0 0 47.4747 4.8485 15.9596 0.202 c 0 0 0 0 61.4141 19.798 64.6465 40.8081 50.101 64.2424 0.202 0 0 0 0 3.4343 49.2929 g 0 0 0 0 22.6263 28.2828 17.5758 9.697 48.8889 0.8081 52.1212 93.9394 100 48.8889 95.1515 70.303 21.4141 t 0 0 0 0 3.0303 34.5455 9.4949 41.2121 0.6061 34.9495 15.1515 6.0606 0 3.6364 0 10.303 29.0909

M08302_2.00_rc_shift6 (EGR2_rc)
; positions_6nt_m2 versus M08302_2.00_rc (EGR2_rc); m=45/158; ncol2=9; w=0; offset=1; strand=R; shift=6; score=0.608551; ------GhGkGGGcG-- ; cor=; Ncor= a 0 0 0 0 0 0 0.0739645 25.5178 0.0739645 0.0739645 15.7544 0.0739645 0.0739645 21.0799 0.0739645 0 0 c 0 0 0 0 0 0 10.7249 45.932 0.0739645 0.0739645 0.0739645 0.0739645 0.0739645 55.6953 0.0739645 0 0 g 0 0 0 0 0 0 89.1272 0.0739645 99.7781 61.9083 84.0976 99.7781 99.7781 0.0739645 99.7781 0 0 t 0 0 0 0 0 0 0.0739645 28.4763 0.0739645 37.9438 0.0739645 0.0739645 0.0739645 23.1509 0.0739645 0 0

M09523_2.00_shift7 (E2F6)
; positions_6nt_m2 versus M09523_2.00 (E2F6); m=46/158; ncol2=10; w=0; offset=2; strand=D; shift=7; score=0.603959; -------vGCGGGArrs ; cor=; Ncor= a 0 0 0 0 0 0 0 25.4 3.4 13.7 1 6 4.4 93.7 61.7 37.2 20 c 0 0 0 0 0 0 0 26.2 4 73.2 14.2 6.1 6.3 1.2 4.6 17.5 25.7 g 0 0 0 0 0 0 0 43.4 92.2 2.7 81.9 76.8 86.7 5 26.2 28.9 30 t 0 0 0 0 0 0 0 5.1 0.4 10.4 2.9 11.1 2.6 0.1 7.5 16.4 24.3

M00230_2.00_rc_shift6 (EGR2_rc)
; positions_6nt_m2 versus M00230_2.00_rc (EGR2_rc); m=47/158; ncol2=10; w=0; offset=1; strand=R; shift=6; score=0.603053; ------rggkGGGygk- ; cor=; Ncor= a 0 0 0 0 0 0 29.2466 14.3531 17.4805 9.50311 20.7623 0.317024 7.12457 17.9665 22.9492 19.4283 0 c 0 0 0 0 0 0 10.1326 5.77749 6.49536 9.03963 2.41848 3.22593 0.00921935 43.7507 11.1706 12.5125 0 g 0 0 0 0 0 0 47.7397 63.6863 67.4299 41.7466 69.626 95.7003 86.795 7.45219 53.1588 37.5897 0 t 0 0 0 0 0 0 12.8811 16.1831 8.59421 39.7106 7.19322 0.756708 6.07116 30.8306 12.7214 30.4696 0

M00133_2.00_rc_shift7 (M00133_2.00_rc)
; positions_6nt_m2 versus M00133_2.00_rc; m=48/158; ncol2=10; w=0; offset=2; strand=R; shift=7; score=0.601191; -------rgkGGGcGkg ; cor=; Ncor= a 0 0 0 0 0 0 0 34.5672 23.6315 12.6852 16.6514 0 1.1649 16.0079 3.56295 4.59858 21.2327 c 0 0 0 0 0 0 0 14.923 11.9721 1.35045 0.00127157 0.00304224 0.00389772 66.892 2.48578 2.87413 11.8882 g 0 0 0 0 0 0 0 29.7523 54.1945 56.2855 83.3039 99.967 98.7545 1.40928 90.9753 50.1866 45.8577 t 0 0 0 0 0 0 0 20.7575 10.202 29.6789 0.0433909 0.0263797 0.0767376 15.6909 2.97602 42.3407 21.0214

M08105_2.00_rc_shift7 (RBPJ_rc)
; positions_6nt_m2 versus M08105_2.00_rc (RBPJ_rc); m=49/158; ncol2=10; w=0; offset=2; strand=R; shift=7; score=0.59732; -------bsTGGGAAmg ; cor=; Ncor= a 0 0 0 0 0 0 0 14.363 20.358 0.0832639 1.45712 0.374688 0.291424 98.6261 99.1674 30.8909 23.5221 c 0 0 0 0 0 0 0 35.0541 36.3031 0.499584 1.0408 0.832639 0.333056 0 0.62448 27.2689 24.1049 g 0 0 0 0 0 0 0 25.1457 32.7644 0.0832639 97.4604 96.2948 96.1282 0.166528 0.041632 24.6461 29.6003 t 0 0 0 0 0 0 0 25.4371 10.5745 99.3339 0.041632 2.49792 3.24729 1.20733 0.166528 17.194 22.7727

M02915_2.00_rc_shift3 (EGR3_rc)
; positions_6nt_m2 versus M02915_2.00_rc (EGR3_rc); m=50/158; ncol2=15; w=-2; offset=-2; strand=R; shift=3; score=0.596734; ---arTGCGKGGGCGkd ; cor=; Ncor= a 0 0 0 41.2689 32.973 5.11509 1.09204 1.15813 0.106157 0.245549 4.18848 0.535332 0 1.57068 0.695187 1.13507 32.5301 c 0 0 0 13.8973 6.60661 10.7417 0.0520021 95.8575 0.37155 0.675261 0.366492 0 0.107643 94.1536 0 0.567537 11.506 g 0 0 0 20.9063 36.036 3.45269 98.752 1.24722 99.5223 27.9312 95.445 99.4647 99.8924 1.39616 99.1979 39.7843 29.2169 t 0 0 0 23.9275 24.3844 80.6905 0.104004 1.73719 0 71.1479 0 0 0 2.87958 0.106952 58.5131 26.747

M00739_2.00_rc_shift8 (RBPJ_rc)
; positions_6nt_m2 versus M00739_2.00_rc (RBPJ_rc); m=51/158; ncol2=9; w=0; offset=3; strand=R; shift=8; score=0.596208; --------rTGgGAamh ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.4743 7.69759 1.85326 21.5592 4.9742 87.454 55.0572 26.081 25.1519 c 0 0 0 0 0 0 0 0 20.2099 10.8147 1.25476 6.69127 1.34214 1.60178 13.9904 36.6425 28.6437 g 0 0 0 0 0 0 0 0 39.495 3.93892 96.2499 54.0983 91.3104 4.57732 19.2666 14.6027 20.7996 t 0 0 0 0 0 0 0 0 13.8208 77.5488 0.642074 17.6512 2.37326 6.3669 11.6858 22.6738 25.4047

M08882_2.00_rc_shift2 (EGR1_rc)
; positions_6nt_m2 versus M08882_2.00_rc (EGR1_rc); m=52/158; ncol2=17; w=-3; offset=-3; strand=R; shift=2; score=0.595897; --grrkGcGkGGGyGGr ; cor=; Ncor= a 0 0 23.2 32 27.8 23.6 11.2 23.6 5.6 3.2 9.2 1.6 2.4 22 8.8 11 33.8 c 0 0 24.8 12.8 18 11.2 3 50.6 3.4 0.4 0.2 0.4 3.2 47.6 1 2.2 12.8 g 0 0 41 31.8 46 35.4 80.8 4.6 87 41 89.2 95.8 93 0.4 84.2 69.6 40.6 t 0 0 11 23.4 8.2 29.8 5 21.2 4 55.4 1.4 2.2 1.4 30 6 17.2 12.8

M00742_2.00_rc_shift8 (RBPJ_rc)
; positions_6nt_m2 versus M00742_2.00_rc (RBPJ_rc); m=53/158; ncol2=9; w=0; offset=3; strand=R; shift=8; score=0.588384; --------gTGgGAamm ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.5675 4.26367 0.903044 23.0162 3.19677 92.6287 64.2555 28.1247 25.4335 c 0 0 0 0 0 0 0 0 18.9428 7.24368 0.581593 5.50799 0.601782 0.269442 10.411 36.4757 27.5517 g 0 0 0 0 0 0 0 0 45.6693 1.99397 98.2993 56.0475 94.8351 3.24982 14.9225 12.1417 22.333 t 0 0 0 0 0 0 0 0 10.8203 86.4987 0.216107 15.4282 1.36635 3.85203 10.411 23.2579 24.6818

M04416_2.00_rc_shift4 (GLI3_rc)
; positions_6nt_m2 versus M04416_2.00_rc (GLI3_rc); m=54/158; ncol2=15; w=-1; offset=-1; strand=R; shift=4; score=0.585782; ----CgwcGTGGGTGGT ; cor=; Ncor= a 0 0 0 0 7.54906 24.6031 34.6933 6.6194 6.55381 0 1.63586 0 0 3.28354 0 0 0.0124198 c 0 0 0 0 76.8469 8.80599 20.3961 52.1395 5.91845 7.35826 0.0759686 0.00433445 0.0206889 0.911312 0.00517143 0.0361982 11.7243 g 0 0 0 0 11.4479 42.3455 12.7418 22.2108 78.0147 0 95.6141 78.3841 99.9586 10.3861 99.9586 99.6122 16.4438 t 0 0 0 0 4.15613 24.2454 32.1687 19.0302 9.51303 92.6417 2.67409 21.6029 0.0155167 85.419 0.0362 0.351639 71.8195

M02931_2.00_rc_shift2 (M02931_2.00_rc)
; positions_6nt_m2 versus M02931_2.00_rc; m=55/158; ncol2=15; w=-3; offset=-3; strand=R; shift=2; score=0.585525; --awdTGCGTGGGCGkw ; cor=; Ncor= a 0 0 41.3736 49.8318 33.6735 2.10084 0.864398 0.893697 0.109111 0.174115 4.39443 0.217984 0.219178 0.92081 0.594916 1.17122 35.2349 c 0 0 13.956 8.68834 7.82313 6.18247 0 97.9774 0.163666 0 0.267953 0.217984 0.109589 96.639 0.270416 0.725042 9.34004 g 0 0 21.3736 11.6592 26.8707 3.06122 98.9735 0.70555 99.7272 20.3134 95.1233 99.1281 99.6164 0.644567 99.1347 32.348 24.1051 t 0 0 23.2967 29.8206 31.6327 88.6555 0.162075 0.42333 0 79.5125 0.214362 0.435967 0.0547945 1.79558 0 65.7557 31.3199

M02889_2.00_rc_shift2 (EGR4_rc)
; positions_6nt_m2 versus M02889_2.00_rc (EGR4_rc); m=56/158; ncol2=16; w=-3; offset=-3; strand=R; shift=2; score=0.583411; --awdTGCGTGGGCGkr ; cor=; Ncor= a 0 0 42.7462 48.2952 33.5029 7.14603 4.59505 2.76775 5.09886 5.79317 2.82084 1.59966 1.90931 8.04232 6.33439 3.17397 38.9936 c 0 0 16.5019 11.4531 7.7068 12.2651 3.8397 75.0684 2.37253 5.55378 2.36865 2.25216 1.36689 80.2298 2.97855 3.03335 9.64318 g 0 0 19.7317 14.3207 26.3614 12.4131 91.3554 19.6149 91.6129 16.8369 94.8105 93.6224 96.4851 5.40325 88.6815 38.6501 30.4483 t 0 0 21.0201 25.9311 32.4289 68.1758 0.20982 2.54896 0.915713 71.8162 0 2.52578 0.238663 6.32465 2.00556 55.1426 20.9149

M04402_2.00_rc_shift4 (GLI2_rc)
; positions_6nt_m2 versus M04402_2.00_rc (GLI2_rc); m=57/158; ncol2=15; w=-1; offset=-1; strand=R; shift=4; score=0.582425; ----CrwcGTGGGTGGT ; cor=; Ncor= a 0 0 0 0 4.31235 28.1178 37.6273 5.24773 4.62215 0.143326 0.91854 0 0 1.79378 0 0.0486766 0 c 0 0 0 0 85.9196 6.55172 16.0065 60.5596 3.81423 3.21887 0.0785593 0 0 0.576146 0 0 9.381 g 0 0 0 0 6.97636 44.0757 8.90617 18.8341 84.9299 0.0418035 97.9937 81.96 100 4.00927 99.9939 99.9513 15.4002 t 0 0 0 0 2.79165 21.2548 37.46 15.3585 6.63369 96.596 1.00919 18.04 0 93.6208 0 0 75.2188

M08349_2.00_rc_shift6 (EGR3_rc)
; positions_6nt_m2 versus M08349_2.00_rc (EGR3_rc); m=58/158; ncol2=9; w=0; offset=1; strand=R; shift=6; score=0.581236; ------GhGGRGGmG-- ; cor=; Ncor= a 0 0 0 0 0 0 0.0647668 30.1166 0.0647668 0.0647668 26.2306 0.0647668 0.0647668 29.0803 0.0647668 0 0 c 0 0 0 0 0 0 24.158 40.2202 0.0647668 0.0647668 0.0647668 0.0647668 0.0647668 49.0285 0.0647668 0 0 g 0 0 0 0 0 0 75.7124 0.0647668 99.8057 81.671 73.6399 99.8057 99.8057 0.0647668 99.8057 0 0 t 0 0 0 0 0 0 0.0647668 29.5984 0.0647668 18.1995 0.0647668 0.0647668 0.0647668 21.8264 0.0647668 0 0

M08939_2.00_rc_shift8 (IKZF1_rc)
; positions_6nt_m2 versus M08939_2.00_rc (IKZF1_rc); m=59/158; ncol2=8; w=0; offset=3; strand=R; shift=8; score=0.579031; --------yTGGGArr- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 4.24448 5.7725 5.60272 1.86757 0 85.0594 32.0883 41.5959 0 c 0 0 0 0 0 0 0 0 28.6078 8.82852 0 3.05603 1.69779 0 3.05603 3.90492 0 g 0 0 0 0 0 0 0 0 23.7691 0 94.3973 95.0764 98.3022 14.9406 53.3107 36.8421 0 t 0 0 0 0 0 0 0 0 43.3786 85.399 0 0 0 0 11.545 17.657 0

M08969_2.00_rc_shift8 (M08969_2.00_rc)
; positions_6nt_m2 versus M08969_2.00_rc; m=60/158; ncol2=8; w=0; offset=3; strand=R; shift=8; score=0.579031; --------yTGGGArr- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 4.24448 5.7725 5.60272 1.86757 0 85.0594 32.0883 41.5959 0 c 0 0 0 0 0 0 0 0 28.6078 8.82852 0 3.05603 1.69779 0 3.05603 3.90492 0 g 0 0 0 0 0 0 0 0 23.7691 0 94.3973 95.0764 98.3022 14.9406 53.3107 36.8421 0 t 0 0 0 0 0 0 0 0 43.3786 85.399 0 0 0 0 11.545 17.657 0

M00622_2.00_rc_shift7 (M00622_2.00_rc)
; positions_6nt_m2 versus M00622_2.00_rc; m=61/158; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.577238; -------cGkGGGcG-- ; cor=; Ncor= a 0 0 0 0 0 0 0 8.36106 0.0302663 0.0302663 3.0569 0.0302663 0.0302663 6.69108 4.20133 0 0 c 0 0 0 0 0 0 0 66.5973 0.0302663 9.11017 0.0302663 0.0302663 0.0302663 56.6245 0.0415973 0 0 g 0 0 0 0 0 0 0 8.36106 99.9092 33.3232 96.8826 99.9092 99.9092 23.3356 91.5557 0 0 t 0 0 0 0 0 0 0 16.6805 0.0302663 57.5363 0.0302663 0.0302663 0.0302663 13.3489 4.20133 0 0

M08025_2.00_rc_shift3 (M08025_2.00_rc)
; positions_6nt_m2 versus M08025_2.00_rc; m=62/158; ncol2=15; w=-2; offset=-2; strand=R; shift=3; score=0.575884; ---grGgkGGGGGAGGG ; cor=; Ncor= a 0 0 0 20 33.3333 12.381 12.381 10.4762 0 1.9048 4.7619 0.9524 0 71.4286 12.381 0 17.1429 c 0 0 0 21.9048 9.5238 12.381 17.1429 2.8571 0 0.9524 0.9524 0 0 4.7619 0 0 0 g 0 0 0 51.4285 40.9524 68.5713 45.7143 27.619 94.2857 93.3333 93.3333 98.0952 100 0.9524 80.9523 100 82.8571 t 0 0 0 6.66669 16.1905 6.66669 24.7619 59.0477 5.7143 3.8095 0.9524 0.9524 0 22.8571 6.66669 0 0

M08999_2.00_rc_shift3 (M08999_2.00_rc)
; positions_6nt_m2 versus M08999_2.00_rc; m=63/158; ncol2=15; w=-2; offset=-2; strand=R; shift=3; score=0.574612; ---ggggtGGGGGAGGG ; cor=; Ncor= a 0 0 0 16.6 14.2 13.6 13.2 10.8 0 0.8 1.2 0 0 79.2 5 0.2 0.4 c 0 0 0 15.8 16 10.6 6.8 2.8 0 0 0 0 0 3.8 0 0 0 g 0 0 0 59.6 60 67.4 61.6 23.6 100 99.2 98.8 100 100 0.4 86.6 99.8 98.6 t 0 0 0 8 9.8 8.4 18.4 62.8 0 0 0 0 0 16.6 8.4 0 1

M08906_2.00_rc_shift4 (ZNF281_rc)
; positions_6nt_m2 versus M08906_2.00_rc (ZNF281_rc); m=64/158; ncol2=15; w=-1; offset=-1; strand=R; shift=4; score=0.573684; ----gggwGGGGGAGGG ; cor=; Ncor= a 0 0 0 0 23.029 20.332 17.0124 27.8008 1.24481 0.414938 8.09129 1.03734 2.6971 76.1411 12.8631 1.03734 3.52697 c 0 0 0 0 17.8423 8.92116 18.0498 7.67635 0.829876 0.414938 1.65975 0.414938 0.414938 10.9959 0.207469 0 0.622407 g 0 0 0 0 45.8506 60.3734 50.8299 17.4274 96.888 97.5104 89.6266 97.9253 96.473 0.207469 74.0664 97.9253 94.1909 t 0 0 0 0 13.278 10.3734 14.1079 47.0954 1.03734 1.65975 0.622407 0.622407 0.414938 12.6556 12.8631 1.03734 1.65975

M01864_2.00_rc_shift4 (M01864_2.00_rc)
; positions_6nt_m2 versus M01864_2.00_rc; m=65/158; ncol2=9; w=-1; offset=-1; strand=R; shift=4; score=0.567757; ----atgCGkGGG---- ; cor=; Ncor= a 0 0 0 0 31.4049 20.2347 22.144 11.8086 1.68027 1.47553 8.33424 0.650307 5.90545 0 0 0 0 c 0 0 0 0 19.4329 22.3629 10.4601 68.6365 0.65636 1.76653 1.01043 4.13583 4.64539 0 0 0 0 g 0 0 0 0 24.704 13.7001 59.0016 2.79778 96.4432 47.8952 88.2675 93.6616 73.3965 0 0 0 0 t 0 0 0 0 24.4582 43.7023 8.3944 16.7571 1.22013 48.8627 2.3878 1.55222 16.0527 0 0 0 0

M04510_2.00_rc_shift7 (ZNF281_rc)
; positions_6nt_m2 versus M04510_2.00_rc (ZNF281_rc); m=66/158; ncol2=12; w=0; offset=2; strand=R; shift=7; score=0.563419; -------yGGGGGAkGG ; cor=; Ncor= a 0 0 0 0 0 0 0 12.136 4.06504 7.7971 5.88782 1.44188 2.31176 78.4909 3.12628 0.803213 3.64583 c 0 0 0 0 0 0 0 49.3761 2.48181 6.30937 7.16939 3.54925 3.941 6.06768 4.72007 1.25207 3.875 g 0 0 0 0 0 0 0 11.3775 86.564 69.4927 71.7682 89.8181 89.432 0.0777907 59.0519 96.1729 80.4375 t 0 0 0 0 0 0 0 27.1103 6.88917 16.4008 15.1746 5.19077 4.31528 15.3637 33.1018 1.77179 12.0417

M00231_2.00_rc_shift5 (EGR2_rc)
; positions_6nt_m2 versus M00231_2.00_rc (EGR2_rc); m=67/158; ncol2=8; w=0; offset=0; strand=R; shift=5; score=0.560234; -----tGCGkGGk---- ; cor=; Ncor= a 0 0 0 0 0 18.1868 6.58864 2.45002 0.0120424 0.0120424 0.0120424 0.0120424 5.277 0 0 0 0 c 0 0 0 0 0 21.8205 0.013151 84.1175 1.21628 0.0120424 0.0120424 0.0120424 1.77069 0 0 0 0 g 0 0 0 0 0 10.9193 93.3851 2.45002 98.7596 56.6113 99.9639 99.9639 56.1185 0 0 0 0 t 0 0 0 0 0 49.0734 0.013151 10.9824 0.0120424 43.3646 0.0120424 0.0120424 36.8338 0 0 0 0

M02643_2.00_rc_shift7 (GLI1_rc)
; positions_6nt_m2 versus M02643_2.00_rc (GLI1_rc); m=68/158; ncol2=11; w=0; offset=2; strand=R; shift=7; score=0.558752; -------CkTGGGTGGT ; cor=; Ncor= a 0 0 0 0 0 0 0 10.7 9.8 0.8 3.8 0 0 6.1 0 0.6 0 c 0 0 0 0 0 0 0 79.2 9.7 0.4 0.8 0 0 1.5 0 0 7.6 g 0 0 0 0 0 0 0 6.8 51.8 0.6 91.4 87.6 100 6.9 100 97.2 6.9 t 0 0 0 0 0 0 0 3.3 28.7 98.2 4 12.4 0 85.5 0 2.1 85.5

M00735_2.00_rc_shift8 (RBPJ_rc)
; positions_6nt_m2 versus M00735_2.00_rc (RBPJ_rc); m=69/158; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.556714; --------rTGgGAacy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.6364 9.7956 3.19331 20.5492 6.4269 84.3087 51.4283 24.6799 24.575 c 0 0 0 0 0 0 0 0 19.767 12.3287 2.72116 8.27156 1.31061 1.59119 15.6456 37.9394 28.268 g 0 0 0 0 0 0 0 0 39.8058 4.76803 93.79 53.6683 89.1653 5.89724 20.4952 15.2715 21.5792 t 0 0 0 0 0 0 0 0 14.7909 73.1076 0.295543 17.5109 3.09718 8.20288 12.4309 22.1091 25.5779

M00741_2.00_rc_shift8 (RBPJ_rc)
; positions_6nt_m2 versus M00741_2.00_rc (RBPJ_rc); m=70/158; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.556254; --------rTGgGAach ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.6826 8.47534 2.72741 20.0622 5.77975 85.6656 53.1744 24.0893 25.3065 c 0 0 0 0 0 0 0 0 19.8026 11.3267 2.25546 7.7589 1.2641 1.5075 15.0831 38.9301 28.2491 g 0 0 0 0 0 0 0 0 40.2783 4.46898 94.9504 55.0829 90.4106 5.20933 19.7584 15.8278 21.1378 t 0 0 0 0 0 0 0 0 14.2366 75.729 0.0667604 17.0959 2.54559 7.61753 11.9841 21.1527 25.3065

M00737_2.00_rc_shift8 (RBPJ_rc)
; positions_6nt_m2 versus M00737_2.00_rc (RBPJ_rc); m=71/158; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.554606; --------rTGgGAach ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.9107 8.96814 2.82812 20.645 5.71038 86.1581 53.2951 24.5873 25.2423 c 0 0 0 0 0 0 0 0 20.1793 11.2873 2.38599 7.44449 1.28696 1.51616 14.5246 38.1769 28.1775 g 0 0 0 0 0 0 0 0 39.8314 4.27883 94.5958 55.0078 90.2231 4.74069 19.8032 14.7646 21.0842 t 0 0 0 0 0 0 0 0 14.0786 75.4657 0.190065 16.9027 2.77954 7.58508 12.3771 22.4711 25.496

M00736_2.00_rc_shift8 (RBPJ_rc)
; positions_6nt_m2 versus M00736_2.00_rc (RBPJ_rc); m=72/158; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.552546; --------gTGgGAamh ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.7805 7.50403 3.40035 21.1053 6.14061 86.0121 57.6754 28.3973 25.8808 c 0 0 0 0 0 0 0 0 17.8153 10.8638 2.39618 7.02535 0.798455 1.19064 12.3645 35.3852 25.8808 g 0 0 0 0 0 0 0 0 42.5236 4.50614 94.0548 56.2342 91.3706 5.66602 18.0804 14.1017 21.8347 t 0 0 0 0 0 0 0 0 14.8806 77.126 0.148656 15.6352 1.69033 7.13126 11.8797 22.1158 26.4036

M02642_2.00_rc_shift7 (GLI3_rc)
; positions_6nt_m2 versus M02642_2.00_rc (GLI3_rc); m=73/158; ncol2=11; w=0; offset=2; strand=R; shift=7; score=0.551362; -------ckTGGGTGGT ; cor=; Ncor= a 0 0 0 0 0 0 0 16.3 15.4 2.7 8.8 0 0 10.4 0 0 0 c 0 0 0 0 0 0 0 65.2 18.1 0.4 1.3 0 0 2.4 0 0 11.9 g 0 0 0 0 0 0 0 13.3 35.9 3.1 84.6 85.3 100 10.6 100 96.6 9.7 t 0 0 0 0 0 0 0 5.2 30.7 93.7 5.4 14.7 0 76.7 0 3.4 78.5

M02641_2.00_rc_shift7 (GLI2_rc)
; positions_6nt_m2 versus M02641_2.00_rc (GLI2_rc); m=74/158; ncol2=11; w=0; offset=2; strand=R; shift=7; score=0.547255; -------CkTGGGTGGT ; cor=; Ncor= a 0 0 0 0 0 0 0 9.1 13.5 0.3 9.5 0 0 8.7 0 0 0 c 0 0 0 0 0 0 0 71.3 12.1 0 0.5 0 0 1 0 0 8.8 g 0 0 0 0 0 0 0 15.6 36.1 0 88.7 90.2 100 6.4 100 95.9 9 t 0 0 0 0 0 0 0 4 38.3 99.7 1.3 9.8 0 83.9 0 4.1 82.2

M02890_2.00_rc_shift2 (EGR4_rc)
; positions_6nt_m2 versus M02890_2.00_rc (EGR4_rc); m=75/158; ncol2=16; w=-3; offset=-3; strand=R; shift=2; score=0.545685; --awrTGCGTGGGCGKw ; cor=; Ncor= a 0 0 54.3269 51.2563 46.2687 2.01005 0 1.10294 0 0 1.26582 0 1.63934 0.364964 0 1.54639 42.439 c 0 0 8.65385 3.51759 0.497512 14.0704 0 97.4265 0.421941 1.0929 0 0 0 99.2701 0 0 3.90244 g 0 0 21.1538 12.5628 29.3532 0 100 0.735294 99.1561 12.0219 98.3122 98.7552 97.541 0 100 25.7732 24.3902 t 0 0 15.8654 32.6633 23.8806 83.9196 0 0.735294 0.421941 86.8852 0.421941 1.24481 0.819672 0.364964 0 72.6804 29.2683

M00740_2.00_rc_shift8 (RBPJ_rc)
; positions_6nt_m2 versus M00740_2.00_rc (RBPJ_rc); m=76/158; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.545658; --------gTGgGAamy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.6135 11.7694 8.42424 23.8762 6.95517 87.6891 60.4377 26.5845 24.3256 c 0 0 0 0 0 0 0 0 15.852 5.84451 0.221156 3.50042 0.0992102 0.305379 8.51316 43.3943 32.5095 g 0 0 0 0 0 0 0 0 43.5232 2.1075 87.4541 58.1417 88.1892 5.22679 20.118 13.0701 14.9025 t 0 0 0 0 0 0 0 0 16.0113 80.2786 3.90053 14.4817 4.75637 6.77878 10.9311 16.951 28.2624

M08884_2.00_rc_shift0 (EGR2_rc)
; positions_6nt_m2 versus M08884_2.00_rc (EGR2_rc); m=77/158; ncol2=18; w=-5; offset=-5; strand=R; shift=0; score=0.541975; grgrrkGwGkGGGhGGr ; cor=; Ncor= a 21.6 29.4 22.8 25.4 32 15 7.6 37 3.4 4 18.2 3.6 2.4 35 5.8 7.6 34.2 c 7.4 9.6 7.4 6.8 10.4 10.4 10.2 19 2.2 1.2 0.6 1.4 4 28.2 0.6 3.4 7.4 g 61.2 41.2 62.2 50.2 50.6 45 76.6 4.4 93 46.2 79.4 89 91.6 2.2 87.4 78.2 50.2 t 9.8 19.8 7.6 17.6 7 29.6 5.6 39.6 1.4 48.6 1.8 6 2 34.6 6.2 10.8 8.2

M00738_2.00_rc_shift8 (RBPJ_rc)
; positions_6nt_m2 versus M00738_2.00_rc (RBPJ_rc); m=78/158; ncol2=8; w=0; offset=3; strand=R; shift=8; score=0.534841; --------rTGgGAam- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.8257 6.56175 1.6784 21.5179 4.35688 88.3444 55.3667 25.9787 0 c 0 0 0 0 0 0 0 0 19.6752 9.78898 1.09181 6.41659 1.10711 1.31159 13.6532 37.9883 0 g 0 0 0 0 0 0 0 0 40.8276 3.71083 96.3359 55.6391 91.997 4.22595 18.9912 14.1156 0 t 0 0 0 0 0 0 0 0 12.6715 79.9384 0.893902 16.4263 2.53896 6.11805 11.9889 21.9174 0

M00229_2.00_rc_shift5 (EGR2_rc)
; positions_6nt_m2 versus M00229_2.00_rc (EGR2_rc); m=79/158; ncol2=9; w=0; offset=0; strand=R; shift=5; score=0.534607; -----tgcGkGkky--- ; cor=; Ncor= a 0 0 0 0 0 19.9197 21.578 16.845 1.59699 0.76819 6.82005 6.80462 7.37992 21.2605 0 0 0 c 0 0 0 0 0 21.5788 6.1822 63.058 0.0132749 11.3167 0.0170751 2.82244 21.9499 31.089 0 0 0 g 0 0 0 0 0 18.3882 65.4754 6.71306 98.3094 28.3969 90.0051 48.7937 29.0426 19.2373 0 0 0 t 0 0 0 0 0 40.1133 6.76441 13.3839 0.0803085 59.5182 3.15777 41.5792 41.6276 28.4132 0 0 0

M04509_2.00_rc_shift7 (ZNF281_rc)
; positions_6nt_m2 versus M04509_2.00_rc (ZNF281_rc); m=80/158; ncol2=12; w=0; offset=2; strand=R; shift=7; score=0.531953; -------tGGGGGAGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 7.76744 2.36014 8.41817 4.06574 0 0.0937207 97.9377 1.5646 1.56971 0.446628 c 0 0 0 0 0 0 0 1.67442 0 5.91229 1.25433 0 0.0937207 0 0.49173 0 1.25056 g 0 0 0 0 0 0 0 23.0233 92.5699 81.9107 91.263 98.3271 99.8126 0 91.0148 98.2918 93.9705 t 0 0 0 0 0 0 0 67.5349 5.06993 3.75881 3.41696 1.67286 0 2.06233 6.92892 0.138504 4.33229

M01862_2.00_rc_shift8 (M01862_2.00_rc)
; positions_6nt_m2 versus M01862_2.00_rc; m=81/158; ncol2=9; w=0; offset=3; strand=R; shift=8; score=0.526201; --------rkGGGCGkd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.2927 0 0 0 0 0 0 0 27.9294 c 0 0 0 0 0 0 0 0 6.56255 0.00439598 0.00439598 0.00439598 0.00439598 99.9868 0.00439598 0.00439598 18.4418 g 0 0 0 0 0 0 0 0 55.5822 59.9631 99.9868 99.9868 99.9868 0.00439598 99.9868 57.9255 26.8904 t 0 0 0 0 0 0 0 0 6.56255 40.0281 0.00439598 0.00439598 0.00439598 0.00439598 0.00439598 42.0657 26.7384

M08398_2.00_rc_shift6 (KLF14_rc)
; positions_6nt_m2 versus M08398_2.00_rc (KLF14_rc); m=82/158; ncol2=14; w=0; offset=1; strand=R; shift=6; score=0.525325; ------rrGkGGGCGkG ; cor=; Ncor= a 0 0 0 0 0 0 31.4168 32.6489 18.4805 8.4189 7.5975 0 0 8.8296 0.4107 0 11.9097 c 0 0 0 0 0 0 20.1232 8.0082 4.7228 0.8214 0 0 0 77.2074 0 0.8214 4.3121 g 0 0 0 0 0 0 34.7023 45.9959 74.1273 49.076 92.4025 100 100 0 99.5893 61.3963 79.4661 t 0 0 0 0 0 0 13.7577 13.347 2.6694 41.6838 0 0 0 13.963 0 37.7823 4.3121

M04504_2.00_rc_shift6 (ZNF75A_rc)
; positions_6nt_m2 versus M04504_2.00_rc (ZNF75A_rc); m=83/158; ncol2=14; w=0; offset=1; strand=R; shift=6; score=0.517075; ------gtGTGGGAAAA ; cor=; Ncor= a 0 0 0 0 0 0 19.586 7.3696 0 0.393279 0.107855 1.204 0.376614 99.8023 80.0173 99.7486 94.1675 c 0 0 0 0 0 0 14.8155 23.4782 0.0899119 0.0893815 0.0359518 0.101747 0.017934 0.0179695 5.43149 0 0 g 0 0 0 0 0 0 46.5887 20.2913 99.8741 0.232392 99.8382 94.1835 99.6055 0.125786 11.2088 0.125718 4.44218 t 0 0 0 0 0 0 19.0099 48.8609 0.0359648 99.2849 0.0179759 4.51077 0 0.0539084 3.34246 0.125718 1.3903

M04511_2.00_rc_shift7 (KLF15_rc)
; positions_6nt_m2 versus M04511_2.00_rc (KLF15_rc); m=84/158; ncol2=12; w=0; offset=2; strand=R; shift=7; score=0.516435; -------ggkGGGcGkg ; cor=; Ncor= a 0 0 0 0 0 0 0 21.6082 16.8277 10.5127 8.3972 0.709723 1.95861 6.32518 3.10192 7.49948 12.5252 c 0 0 0 0 0 0 0 12.5381 7.1985 4.34783 2.53249 2.37757 0.406504 50.9119 0 3.43899 5.5332 g 0 0 0 0 0 0 0 48.3232 64.9423 48.7021 87.4375 93.1157 96.9697 23.1277 96.8981 34.7006 65.996 t 0 0 0 0 0 0 0 17.5305 11.0315 36.4374 1.63279 3.79702 0.665188 19.6352 0 54.3609 15.9457

M02892_2.00_rc_shift8 (ZNF740_rc)
; positions_6nt_m2 versus M02892_2.00_rc (ZNF740_rc); m=85/158; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.515336; --------gTGGGGGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.3217 13.2398 5.5284 1.16885 0.594916 3.02981 1.15207 1.64485 1.37663 c 0 0 0 0 0 0 0 0 3.35411 7.08083 1.1967 0.143859 0.757166 2.86603 1.08118 1.04351 0.352983 g 0 0 0 0 0 0 0 0 67.8055 7.02739 91.6568 97.7882 98.035 89.0599 96.3843 96.1797 95.976 t 0 0 0 0 0 0 0 0 7.5187 72.652 1.61807 0.899119 0.612944 5.04422 1.38249 1.13194 2.29439

M02891_2.00_rc_shift8 (ZNF740_rc)
; positions_6nt_m2 versus M02891_2.00_rc (ZNF740_rc); m=86/158; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.506856; --------gTGGGGGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.3682 9.80392 4.35876 1.01545 1.35747 1.48917 1.53568 2.08245 5.75625 c 0 0 0 0 0 0 0 0 5.29344 3.60531 0.963956 1.6777 0.950226 0.541516 0.361337 0.297493 1.07185 g 0 0 0 0 0 0 0 0 61.8815 18.5642 90.1509 94.9669 97.3303 97.0668 97.1545 91.4152 85.391 t 0 0 0 0 0 0 0 0 12.4568 68.0266 4.5264 2.33996 0.361991 0.902527 0.948509 6.20484 7.78087

M00226_2.00_rc_shift9 (KLF1_rc)
; positions_6nt_m2 versus M00226_2.00_rc (KLF1_rc); m=87/158; ncol2=8; w=0; offset=4; strand=R; shift=9; score=0.504204; ---------kGGGCGkG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 13.0642 0.0302663 0.0302663 0.0302663 0.0302663 0.0302663 0.031211 12.5208 c 0 0 0 0 0 0 0 0 0 4.38368 0.0302663 0.0302663 0.0302663 75.6961 3.0569 0.031211 4.20133 g 0 0 0 0 0 0 0 0 0 30.4253 99.9092 99.9092 99.9092 3.0569 96.8826 59.3321 74.9168 t 0 0 0 0 0 0 0 0 0 52.1267 0.0302663 0.0302663 0.0302663 21.2167 0.0302663 40.6055 8.36106

M00140_2.00_rc_shift9 (M00140_2.00_rc)
; positions_6nt_m2 versus M00140_2.00_rc; m=88/158; ncol2=8; w=0; offset=4; strand=R; shift=9; score=0.504019; ---------TGGGATRG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0.142045 0.110619 0.110619 0.110619 99.6681 0.110619 25 0.198413 c 0 0 0 0 0 0 0 0 0 0.142045 0.110619 0.110619 0.110619 0.110619 0.110619 0.124378 0.198413 g 0 0 0 0 0 0 0 0 0 0.142045 99.6681 99.6681 99.6681 0.110619 0.110619 74.7512 79.5635 t 0 0 0 0 0 0 0 0 0 99.5739 0.110619 0.110619 0.110619 0.110619 99.6681 0.124378 20.0397

M09512_2.00_rc_shift7 (M09512_2.00_rc)
; positions_6nt_m2 versus M09512_2.00_rc; m=89/158; ncol2=12; w=0; offset=2; strand=R; shift=7; score=0.503577; -------csTGGGTGGT ; cor=; Ncor= a 0 0 0 0 0 0 0 8.8 7.1 2.8 2 0.1 0.5 3.3 0.7 0.9 0.5 c 0 0 0 0 0 0 0 56.4 26.4 2.4 0.5 0.1 1.3 0.6 0.2 0.2 7.4 g 0 0 0 0 0 0 0 12.8 54.6 1.5 95.9 90.2 98 1.1 99 97.2 4.1 t 0 0 0 0 0 0 0 21.9 11.9 93.3 1.5 9.6 0.2 95.1 0.1 1.6 88

M02921_2.00_rc_shift8 (SP1_rc)
; positions_6nt_m2 versus M02921_2.00_rc (SP1_rc); m=90/158; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.501254; --------gkGGGyGkG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.1489 11.877 16.8996 0.152532 0.30525 20.2333 0.181984 0.232288 16.0776 c 0 0 0 0 0 0 0 0 10.4546 1.56416 0 0.0610128 0.030525 48.8261 0.181984 4.96516 1.8711 g 0 0 0 0 0 0 0 0 51.7187 47.5875 82.9733 99.6034 99.6642 0.867355 99.0294 47.7062 75.4216 t 0 0 0 0 0 0 0 0 17.6778 38.9714 0.127065 0.183038 0 30.0733 0.606612 47.0964 6.62971

M02935_2.00_rc_shift8 (M02935_2.00_rc)
; positions_6nt_m2 versus M02935_2.00_rc; m=91/158; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.497841; --------gtGGGGGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 23.3146 15.4176 8.14901 4.4085 4.74621 3.17294 2.5579 4.83965 7.89894 c 0 0 0 0 0 0 0 0 7.0626 6.98965 3.11409 3.8059 1.35135 0.27894 0.829589 0.670554 2.79255 g 0 0 0 0 0 0 0 0 53.3507 10.4971 77.3865 84.3324 87.6401 92.7127 91.9115 77.5219 70.7181 t 0 0 0 0 0 0 0 0 16.2721 67.0956 11.3504 7.45322 6.26236 3.83543 4.701 16.9679 18.5904

M07929_2.00_rc_shift5 (EGR1_rc)
; positions_6nt_m2 versus M07929_2.00_rc (EGR1_rc); m=92/158; ncol2=20; w=0; offset=0; strand=R; shift=5; score=0.490494; -----kGCGkGGGCGGg ; cor=; Ncor= a 0 0 0 0 0 12.9293 5.45451 12.1212 0 0 4.8485 0 0 10.5051 1.6162 6.8687 24.8485 c 0 0 0 0 0 17.1717 4.2424 80.202 0.202 0.808099 0 0.202 0 69.6969 0 0.8081 21.6162 g 0 0 0 0 0 29.2929 90.3031 0.6061 99.798 47.6768 95.1515 99.798 100 0 97.9798 73.9394 40 t 0 0 0 0 0 40.6061 0 7.0707 0 51.5151 0 0 0 19.798 0.404 18.3838 13.5354

M00241_2.00_rc_shift8 (KLF11_rc)
; positions_6nt_m2 versus M00241_2.00_rc (KLF11_rc); m=93/158; ncol2=8; w=0; offset=3; strand=R; shift=8; score=0.487231; --------GGGGGCGk- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 6.71543 0.0499002 0.0499002 0.0499002 0.0499002 0.0499002 0.0499002 0.0766871 0 c 0 0 0 0 0 0 0 0 0.0664894 0.0499002 0.0499002 5.03992 0.0499002 79.8902 0.0499002 0.0766871 0 g 0 0 0 0 0 0 0 0 93.1516 74.9002 99.8503 89.8703 94.8603 10.0299 99.8503 61.4264 0 t 0 0 0 0 0 0 0 0 0.0664894 25 0.0499002 5.03992 5.03992 10.0299 0.0499002 38.4202 0

M02732_2.00_rc_shift8 (GLI2_rc)
; positions_6nt_m2 versus M02732_2.00_rc (GLI2_rc); m=94/158; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.487017; --------gTGkGTGGT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 18.135 2.34432 10.5925 0.175336 0.392499 8.832 0.175131 0.930626 0.100536 c 0 0 0 0 0 0 0 0 13.941 11.6484 0.897666 0.263004 0.087222 3.104 0.0437828 0.126904 11.193 g 0 0 0 0 0 0 0 0 53.0459 3.07692 81.2926 66.1601 98.7353 15.616 99.1243 95.7699 12.8351 t 0 0 0 0 0 0 0 0 14.8782 82.9304 7.21724 33.4015 0.784998 72.448 0.656743 3.17259 75.8713

M06117_2.00_rc_shift8 (SP6_rc)
; positions_6nt_m2 versus M06117_2.00_rc (SP6_rc); m=95/158; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.484989; --------gkGGGCGkr ; cor=; Ncor= a 0 0 0 0 0 0 0 0 18.1818 13.6364 13.6364 0 0 9.09091 0 0 40.9091 c 0 0 0 0 0 0 0 0 13.6364 0 0 0 0 86.3636 0 0 0 g 0 0 0 0 0 0 0 0 63.6364 31.8182 86.3636 100 95.4545 0 100 45.4545 59.0909 t 0 0 0 0 0 0 0 0 4.54545 54.5455 0 0 4.54545 4.54545 0 54.5455 0

M07927_2.00_rc_shift4 (EGR1_rc)
; positions_6nt_m2 versus M07927_2.00_rc (EGR1_rc); m=96/158; ncol2=20; w=-1; offset=-1; strand=R; shift=4; score=0.48086; ----gkGCGkGGGCGGg ; cor=; Ncor= a 0 0 0 0 19.5021 15.3527 3.527 8.7137 0 0 5.3942 0 0 9.1286 1.2448 5.39421 24.8963 c 0 0 0 0 24.2739 18.6722 4.3568 85.6846 0 0.4149 0 0 0 71.5768 0.2075 2.4896 21.9917 g 0 0 0 0 45.8506 28.8382 92.1162 0 100 56.0166 94.6058 100 100 0 97.5104 76.3486 41.0788 t 0 0 0 0 10.3734 37.1369 0 5.6017 0 43.5685 0 0 0 19.2946 1.0373 15.7676 12.0332

M08968_2.00_rc_shift4 (M08968_2.00_rc)
; positions_6nt_m2 versus M08968_2.00_rc; m=97/158; ncol2=20; w=-1; offset=-1; strand=R; shift=4; score=0.480259; ----rgGvGrRGGAGGr ; cor=; Ncor= a 0 0 0 0 31.2 21 8.8 27.4 9.8 29 25.2 0.6 1.2 82.6 1.2 3.6 47.6 c 0 0 0 0 10.2 16 11.2 30.4 8.4 5.2 2.6 2.6 1.6 14.8 0.8 1.2 10 g 0 0 0 0 51.4 56 76.2 27.6 80.4 59.6 71.4 95.6 97.2 0.4 97 90.8 38.6 t 0 0 0 0 7.2 7 3.8 14.6 1.4 6.2 0.8 1.2 0 2.2 1 4.4 3.8

M08937_2.00_rc_shift4 (WT1_rc)
; positions_6nt_m2 versus M08937_2.00_rc (WT1_rc); m=98/158; ncol2=20; w=-1; offset=-1; strand=R; shift=4; score=0.480259; ----rgGvGrRGGAGGr ; cor=; Ncor= a 0 0 0 0 31.2 21 8.8 27.4 9.8 29 25.2 0.6 1.2 82.6 1.2 3.6 47.6 c 0 0 0 0 10.2 16 11.2 30.4 8.4 5.2 2.6 2.6 1.6 14.8 0.8 1.2 10 g 0 0 0 0 51.4 56 76.2 27.6 80.4 59.6 71.4 95.6 97.2 0.4 97 90.8 38.6 t 0 0 0 0 7.2 7 3.8 14.6 1.4 6.2 0.8 1.2 0 2.2 1 4.4 3.8

M08900_2.00_rc_shift9 (ZIC1_rc)
; positions_6nt_m2 versus M08900_2.00_rc (ZIC1_rc); m=99/158; ncol2=9; w=0; offset=4; strand=R; shift=9; score=0.480012; ---------kGGGwGGk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 4.72313 8.79479 0 0 29.9674 11.7264 5.86319 3.25733 c 0 0 0 0 0 0 0 0 0 13.1922 5.86319 2.9316 5.86319 2.9316 0 23.4528 8.79479 g 0 0 0 0 0 0 0 0 0 51.9544 85.342 94.1368 94.1368 17.5896 76.5472 70.684 26.7101 t 0 0 0 0 0 0 0 0 0 30.1303 0 2.9316 0 49.5114 11.7264 0 61.2378

M08990_2.00_rc_shift9 (M08990_2.00_rc)
; positions_6nt_m2 versus M08990_2.00_rc; m=100/158; ncol2=9; w=0; offset=4; strand=R; shift=9; score=0.480012; ---------kGGGwGGk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 4.72313 8.79479 0 0 29.9674 11.7264 5.86319 3.25733 c 0 0 0 0 0 0 0 0 0 13.1922 5.86319 2.9316 5.86319 2.9316 0 23.4528 8.79479 g 0 0 0 0 0 0 0 0 0 51.9544 85.342 94.1368 94.1368 17.5896 76.5472 70.684 26.7101 t 0 0 0 0 0 0 0 0 0 30.1303 0 2.9316 0 49.5114 11.7264 0 61.2378

M00242_2.00_rc_shift8 (KLF11_rc)
; positions_6nt_m2 versus M00242_2.00_rc (KLF11_rc); m=101/158; ncol2=8; w=0; offset=3; strand=R; shift=8; score=0.479438; --------GGGGGCGk- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 7.7454 0.052521 0.052521 0.052521 0.052521 0.052521 0.052521 0.0712251 0 c 0 0 0 0 0 0 0 0 0.0766871 0.052521 0.052521 5.30462 0.052521 84.0861 0.052521 0.0712251 0 g 0 0 0 0 0 0 0 0 92.1012 78.834 99.8424 94.5903 94.5903 10.5567 99.8424 64.1738 0 t 0 0 0 0 0 0 0 0 0.0766871 21.0609 0.052521 0.052521 5.30462 5.30462 0.052521 35.6838 0

M07563_2.00_rc_shift9 (ZNF263_rc)
; positions_6nt_m2 versus M07563_2.00_rc (ZNF263_rc); m=102/158; ncol2=9; w=0; offset=4; strand=R; shift=9; score=0.47469; ---------rGGGAGGA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 27.4804 18.8642 0.0652742 0.0652742 99.8042 2.93734 0.0652742 99.8042 c 0 0 0 0 0 0 0 0 0 19.9086 0.0652742 0.0652742 0.0652742 0.0652742 0.0652742 17.2977 0.0652742 g 0 0 0 0 0 0 0 0 0 46.2794 75.5222 99.8042 99.8042 0.0652742 96.1488 82.5718 0.0652742 t 0 0 0 0 0 0 0 0 0 6.33159 5.5483 0.0652742 0.0652742 0.0652742 0.848564 0.0652742 0.0652742

M08967_2.00_rc_shift2 (M08967_2.00_rc)
; positions_6nt_m2 versus M08967_2.00_rc; m=103/158; ncol2=19; w=-3; offset=-3; strand=R; shift=2; score=0.471691; --sgsggwGGGGGmGGG ; cor=; Ncor= a 0 0 10 16.2 17.8 17.8 8.4 30 4.4 7.8 16.2 8.4 1.4 63.6 12.2 4 14 c 0 0 26.6 21.8 31.6 14.6 15.2 22 3 5.2 2.8 1.4 0.4 29.2 0.6 1.6 0.4 g 0 0 55.2 54.8 45.6 58.6 67.4 15.8 90.2 81.8 77.6 88.4 98 1.2 84.4 93.2 82.2 t 0 0 8.2 7.2 5 9 9 32.2 2.4 5.2 3.4 1.8 0.2 6 2.8 1.2 3.4

M02910_2.00_rc_shift8 (SP3,SP6_rc)
; positions_6nt_m2 versus M02910_2.00_rc (SP3,SP6_rc); m=104/158; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.471561; --------gkGGGyGTG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 22.2955 8.92737 16.4417 0.855072 1.17904 14.4538 3.20576 1.80688 4.39142 c 0 0 0 0 0 0 0 0 9.05016 2.34931 1.5092 0.768116 0.55313 55.5378 1.2004 2.67418 3.17299 g 0 0 0 0 0 0 0 0 55.8995 45.3752 81.092 95.7826 96.2009 3.89076 93.3343 23.8364 83.8812 t 0 0 0 0 0 0 0 0 12.7548 43.3481 0.957055 2.5942 2.06696 26.1176 2.25957 71.6826 8.55439

M04559_2.00_rc_shift7 (SP3,SP6_rc)
; positions_6nt_m2 versus M04559_2.00_rc (SP3,SP6_rc); m=105/158; ncol2=13; w=0; offset=2; strand=R; shift=7; score=0.470344; -------rGkGGGCGKG ; cor=; Ncor= a 0 0 0 0 0 0 0 29.946 18.7065 8.1491 15.343 0 0.51731 14.5067 0 0.0799361 8.08184 c 0 0 0 0 0 0 0 7.9816 1.74845 0.511602 0 0 0.0198965 70.9581 0 0.019984 1.15942 g 0 0 0 0 0 0 0 41.0082 75.2961 42.5361 84.4711 100 99.4628 0 100 25.9592 85.2344 t 0 0 0 0 0 0 0 21.0642 4.24892 48.8032 0.185874 0 0 14.5351 0 73.9408 5.5243

M04658_2.00_rc_shift7 (KLF14_rc)
; positions_6nt_m2 versus M04658_2.00_rc (KLF14_rc); m=106/158; ncol2=13; w=0; offset=2; strand=R; shift=7; score=0.46691; -------ggkGGGyGtG ; cor=; Ncor= a 0 0 0 0 0 0 0 24.4379 20.3189 11.1171 18.8698 0 0.333507 12.0765 0.358974 8.28698 6.02824 c 0 0 0 0 0 0 0 13.7927 5.99601 2.51964 0.0675733 0.0729015 0 52.0917 0 16.1782 1.66264 g 0 0 0 0 0 0 0 41.0331 62.5422 50.5193 80.7754 99.5938 99.6665 0 98.0821 20.6916 88.8259 t 0 0 0 0 0 0 0 20.7362 11.1429 35.8439 0.287186 0.333264 0 35.8318 1.55897 54.8431 3.48319

M01917_2.00_shift6 (M01917_2.00)
; positions_6nt_m2 versus M01917_2.00; m=107/158; ncol2=8; w=0; offset=1; strand=D; shift=6; score=0.466895; ------gGGGGGGa--- ; cor=; Ncor= a 0 0 0 0 0 0 12.8485 4.10521 1.59473 0.00793399 0.00793399 6.35513 7.14852 47.8162 0 0 0 c 0 0 0 0 0 0 17.434 20.4933 8.73532 2.38813 1.59473 8.73532 7.94192 17.3946 0 0 0 g 0 0 0 0 0 0 62.3716 68.0187 87.2818 93.629 97.596 81.728 78.5544 23.9135 0 0 0 t 0 0 0 0 0 0 7.34593 7.38283 2.38813 3.97493 0.801333 3.18153 6.35513 10.8757 0 0 0

M02888_2.00_rc_shift8 (KLF16_rc)
; positions_6nt_m2 versus M02888_2.00_rc (KLF16_rc); m=108/158; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.465694; --------GKGGGcGKG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 18.164 2.39378 5.61343 0 0 15.0093 1.10852 0 2.6087 c 0 0 0 0 0 0 0 0 1.12911 1.13704 0.173611 0.493218 0 60.0372 0.991832 1.94766 0.347826 g 0 0 0 0 0 0 0 0 79.136 70.3172 93.287 99.3835 99.5062 6.4432 94.049 28.0584 93.4493 t 0 0 0 0 0 0 0 0 1.57094 26.152 0.925926 0.123305 0.493827 18.5102 3.85064 69.9939 3.5942

M10229_2.00_rc_shift9 (ZIC3_rc)
; positions_6nt_m2 versus M10229_2.00_rc (ZIC3_rc); m=109/158; ncol2=9; w=0; offset=4; strand=R; shift=9; score=0.465155; ---------yGGGkggt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 17.1429 8.57143 2.85714 5.71429 14.2857 14.2857 17.1429 8.57143 c 0 0 0 0 0 0 0 0 0 25.7143 2.85714 2.85714 5.71429 2.85714 11.4286 17.1429 20 g 0 0 0 0 0 0 0 0 0 14.2857 88.5714 82.8571 82.8571 28.5714 65.7143 54.2857 8.57143 t 0 0 0 0 0 0 0 0 0 42.8571 0 11.4286 5.71429 54.2857 8.57143 11.4286 62.8571

M08096_2.00_rc_shift8 (SP1_rc)
; positions_6nt_m2 versus M08096_2.00_rc (SP1_rc); m=110/158; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.45974; --------rGGGGmGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 27.2384 15.1477 23.5287 0 0 31.4976 0.835814 0 22.1204 c 0 0 0 0 0 0 0 0 8.40394 0 0 0 0 52.9425 0 0 0 g 0 0 0 0 0 0 0 0 56.8926 72.7845 76.4713 100 100 0 99.1642 100 76.746 t 0 0 0 0 0 0 0 0 7.46508 12.0678 0 0 0 15.5599 0 0 1.1335

M08321_2.00_rc_shift8 (ZNF281_rc)
; positions_6nt_m2 versus M08321_2.00_rc (ZNF281_rc); m=111/158; ncol2=12; w=0; offset=3; strand=R; shift=8; score=0.458841; --------GGGGGAGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.0744048 0.0744048 3.64583 0.0744048 0.0744048 73.2887 12.2768 0.0744048 1.86012 c 0 0 0 0 0 0 0 0 0.0744048 0.0744048 0.0744048 0.0744048 0.0744048 17.0387 0.0744048 0.0744048 0.0744048 g 0 0 0 0 0 0 0 0 99.7768 99.7768 96.2054 99.7768 99.7768 0.0744048 77.1577 99.7768 96.2054 t 0 0 0 0 0 0 0 0 0.0744048 0.0744048 0.0744048 0.0744048 0.0744048 9.59821 10.4911 0.0744048 1.86012

M00617_2.00_rc_shift9 (M00617_2.00_rc)
; positions_6nt_m2 versus M00617_2.00_rc; m=112/158; ncol2=9; w=0; offset=4; strand=R; shift=9; score=0.456532; ---------wGGGCGkg ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 32.7408 18.9096 0 0 7.69407 0.61303 5.62258 23.276 c 0 0 0 0 0 0 0 0 0 8.48772 0.375188 0.430847 3.40174e-19 72.9993 6.91425e-05 5.97026 9.46331 g 0 0 0 0 0 0 0 0 0 23.3039 80.6139 99.2854 99.9999 3.09116e-07 98.5594 36.118 47.819 t 0 0 0 0 0 0 0 0 0 35.4676 0.101233 0.283087 3.00723e-10 19.3067 0.827505 52.2892 19.4417

M08287_2.00_rc_shift10 (PATZ1_rc)
; positions_6nt_m2 versus M08287_2.00_rc (PATZ1_rc); m=113/158; ncol2=8; w=0; offset=5; strand=R; shift=10; score=0.455925; ----------GGGmGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 16 0 0 42.6667 0 0 11.2 c 0 0 0 0 0 0 0 0 0 0 0 0 0 35.2 0 0 0 g 0 0 0 0 0 0 0 0 0 0 84 100 100 0 100 100 81.0667 t 0 0 0 0 0 0 0 0 0 0 0 0 0 22.1333 0 0 7.7333

M07683_2.00_shift8 (ZNF75D)
; positions_6nt_m2 versus M07683_2.00 (ZNF75D); m=114/158; ncol2=12; w=0; offset=3; strand=D; shift=8; score=0.455465; --------GTGGGAAAg ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.272926 3.32969 1.36463 5.29476 15.1201 99.3996 92.4127 84.9891 9.66157 c 0 0 0 0 0 0 0 0 0.0545852 1.58297 0.0545852 0.0545852 1.80131 0.272926 2.23799 0.0545852 17.5218 g 0 0 0 0 0 0 0 0 99.6179 0.0545852 98.5262 91.1026 80.8406 0.272926 5.07642 14.6834 51.583 t 0 0 0 0 0 0 0 0 0.0545852 95.0328 0.0545852 3.54803 2.23799 0.0545852 0.272926 0.272926 21.2336

M08455_2.00_rc_shift6 (M08455_2.00_rc)
; positions_6nt_m2 versus M08455_2.00_rc; m=115/158; ncol2=16; w=0; offset=1; strand=R; shift=6; score=0.453966; ------byGTGRGAAmC ; cor=; Ncor= a 0 0 0 0 0 0 10 0 0 0 0 30 0 100 100 50 10 c 0 0 0 0 0 0 30 40 0 0 0 0 0 0 0 50 70 g 0 0 0 0 0 0 30 0 100 0 100 70 100 0 0 0 10 t 0 0 0 0 0 0 30 60 0 100 0 0 0 0 0 0 10

M06171_2.00_rc_shift8 (M06171_2.00_rc)
; positions_6nt_m2 versus M06171_2.00_rc; m=116/158; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.451466; --------gtGGGTGTG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20 20 0 0 0 5 0 0 0 c 0 0 0 0 0 0 0 0 5 0 0 0 0 10 0 10 0 g 0 0 0 0 0 0 0 0 55 15 100 100 100 0 100 10 100 t 0 0 0 0 0 0 0 0 20 65 0 0 0 85 0 80 0

M05827_2.00_shift8 (XPA)
; positions_6nt_m2 versus M05827_2.00 (XPA); m=117/158; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.450258; --------gtGTGAGGT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 22.625 6.5233 0 7.00935 5.3066 68.5518 1.77976 0 4.02098 c 0 0 0 0 0 0 0 0 10.125 12.4731 0 7.38318 0 14.2245 4.78309 0 8.12937 g 0 0 0 0 0 0 0 0 54.5 23.6559 100 10.8411 94.3396 5.65553 88.9878 99.3789 17.9196 t 0 0 0 0 0 0 0 0 12.75 57.3477 0 74.7664 0.353774 11.5681 4.44939 0.621118 69.9301

M08086_2.00_rc_shift9 (KLF5_rc)
; positions_6nt_m2 versus M08086_2.00_rc (KLF5_rc); m=118/158; ncol2=10; w=0; offset=4; strand=R; shift=9; score=0.449314; ---------dGGGyGKG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.13 3.49717 0 0 24.8182 0 4.15105 11.7772 c 0 0 0 0 0 0 0 0 0 0 0 0 0 38.0721 0 0 0 g 0 0 0 0 0 0 0 0 0 41.1065 96.5028 100 100 0 100 70.3034 88.2228 t 0 0 0 0 0 0 0 0 0 28.7635 0 0 0 37.1097 0 25.5455 0

M04386_2.00_rc_shift9 (ZNF263_rc)
; positions_6nt_m2 versus M04386_2.00_rc (ZNF263_rc); m=119/158; ncol2=10; w=0; offset=4; strand=R; shift=9; score=0.448412; ---------rGGGAGsA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 31.6721 6.26316 0 3.23604 94.9564 0.935745 1.68664 97.0102 c 0 0 0 0 0 0 0 0 0 20.9836 2.78947 0.325309 0 0 0 67.6875 0 g 0 0 0 0 0 0 0 0 0 32.6557 80.2632 99.2193 96.764 2.67746 95.1341 27.2526 2.98982 t 0 0 0 0 0 0 0 0 0 14.6885 10.6842 0.455433 0 2.36613 3.93013 3.37328 0

M04387_2.00_rc_shift9 (ZNF263_rc)
; positions_6nt_m2 versus M04387_2.00_rc (ZNF263_rc); m=120/158; ncol2=10; w=0; offset=4; strand=R; shift=9; score=0.448406; ---------rGGGAGsA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 31.8725 8.33674 1.97198 0 92.5711 2.11752 1.07362 94.2091 c 0 0 0 0 0 0 0 0 0 13.0336 2.86065 2.02387 2.31916 0 2.17046 67.3696 0 g 0 0 0 0 0 0 0 0 0 34.5475 71.8022 91.178 97.0182 5.79557 93.0122 28.9494 5.79088 t 0 0 0 0 0 0 0 0 0 20.5464 17.0004 4.82615 0.662617 1.6333 2.69984 2.60736 0

M07615_2.00_rc_shift9 (ZNF641_rc)
; positions_6nt_m2 versus M07615_2.00_rc (ZNF641_rc); m=121/158; ncol2=9; w=0; offset=4; strand=R; shift=9; score=0.447514; ---------TGGGGGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 c 0 0 0 0 0 0 0 0 0 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 g 0 0 0 0 0 0 0 0 0 20.0262 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 t 0 0 0 0 0 0 0 0 0 79.712 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089

M08768_2.00_rc_shift4 (M08768_2.00_rc)
; positions_6nt_m2 versus M08768_2.00_rc; m=122/158; ncol2=8; w=-1; offset=-1; strand=R; shift=4; score=0.444845; ----sCrCGTGg----- ; cor=; Ncor= a 0 0 0 0 1.2 8 59.4 0.2 13.8 0.2 0.2 4.2 0 0 0 0 0 c 0 0 0 0 48.6 88.6 1.2 98 2.2 0 0.2 12.4 0 0 0 0 0 g 0 0 0 0 33.6 2 27.8 1 82.4 0.2 99.2 64.6 0 0 0 0 0 t 0 0 0 0 16.6 1.4 11.6 0.8 1.6 99.6 0.4 18.8 0 0 0 0 0

M00766_2.00_rc_shift10 (M00766_2.00_rc)
; positions_6nt_m2 versus M00766_2.00_rc; m=123/158; ncol2=8; w=0; offset=5; strand=R; shift=10; score=0.443029; ----------gGGAGsA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 15 3.84615 3.57143 89.2857 3.57143 3.57143 89.2857 c 0 0 0 0 0 0 0 0 0 0 15 3.84615 3.57143 3.57143 3.57143 53.5714 3.57143 g 0 0 0 0 0 0 0 0 0 0 60 80.7692 89.2857 3.57143 71.4286 39.2857 3.57143 t 0 0 0 0 0 0 0 0 0 0 10 11.5385 3.57143 3.57143 21.4286 3.57143 3.57143

M08878_2.00_rc_shift2 (ZBTB17_rc)
; positions_6nt_m2 versus M08878_2.00_rc (ZBTB17_rc); m=124/158; ncol2=19; w=-3; offset=-3; strand=R; shift=2; score=0.442953; --grrggwGGGGGAgGG ; cor=; Ncor= a 0 0 18.4 38.8 28 21.2 20 32 14 20.4 23.8 15.2 7.2 69.6 19.8 5.2 23.2 c 0 0 23.8 15.6 5.4 8 13.6 12.8 4 2.6 3.4 0.6 7.4 20 3.2 1.6 2.2 g 0 0 43.6 30 54 61 57.2 9.4 81.2 68 68.4 79 85 0.2 53.8 88.6 72.6 t 0 0 14.2 15.6 12.6 9.8 9.2 45.8 0.8 9 4.4 5.2 0.4 10.2 23.2 4.6 2

M08182_2.00_shift4 (MXI1)
; positions_6nt_m2 versus M08182_2.00 (MXI1); m=125/158; ncol2=8; w=-1; offset=-1; strand=D; shift=4; score=0.440787; ----CCACGTGG----- ; cor=; Ncor= a 0 0 0 0 5.79871 4.814 69.0372 4.7046 4.0481 7.0022 4.1575 5.14221 0 0 0 0 0 c 0 0 0 0 77.8994 85.4486 8.6433 81.9475 9.2998 15.3173 5.5799 11.1597 0 0 0 0 0 g 0 0 0 0 11.1597 5.5799 15.3173 9.2998 81.9475 8.6433 85.4486 77.8994 0 0 0 0 0 t 0 0 0 0 5.14221 4.1575 7.0022 4.0481 4.7046 69.0372 4.814 5.79871 0 0 0 0 0

M09947_2.00_shift4 (ATF6)
; positions_6nt_m2 versus M09947_2.00 (ATF6); m=126/158; ncol2=8; w=-1; offset=-1; strand=D; shift=4; score=0.440125; ----TGACGTGG----- ; cor=; Ncor= a 0 0 0 0 0 0 100 0 0 0 0 10 0 0 0 0 0 c 0 0 0 0 0 0 0 100 0 0 10 0 0 0 0 0 0 g 0 0 0 0 0 100 0 0 100 0 90 90 0 0 0 0 0 t 0 0 0 0 100 0 0 0 0 100 0 0 0 0 0 0 0

M00779_2.00_rc_shift9 (M00779_2.00_rc)
; positions_6nt_m2 versus M00779_2.00_rc; m=127/158; ncol2=10; w=0; offset=4; strand=R; shift=9; score=0.438329; ---------dRGGyGkg ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 27.2187 25.0959 0.0156594 1.44845 13.6533 9.07452 9.6347 20.3882 c 0 0 0 0 0 0 0 0 0 15.3929 0.0240579 0.0134782 0.013043 49.5994 0.00980827 12.0056 12.8707 g 0 0 0 0 0 0 0 0 0 25.126 70.2954 96.8649 94.6792 0.00329278 84.3918 34.3077 46.7566 t 0 0 0 0 0 0 0 0 0 32.2624 4.58462 3.10594 3.85933 36.7441 6.52389 44.052 19.9845

M00787_2.00_rc_shift9 (M00787_2.00_rc)
; positions_6nt_m2 versus M00787_2.00_rc; m=128/158; ncol2=10; w=0; offset=4; strand=R; shift=9; score=0.435543; ---------wGGGyGkg ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 26.0102 18.7213 0 0.0374307 7.60943 0.0324799 6.02308 18.9328 c 0 0 0 0 0 0 0 0 0 12.4098 0.0148413 0.000459717 0.00261821 62.1399 0.00306676 8.63306 10.2872 g 0 0 0 0 0 0 0 0 0 22.3872 79.0168 99.9931 99.9566 0.00388508 99.7699 34.6604 51.4647 t 0 0 0 0 0 0 0 0 0 39.1927 2.24714 0.00625172 0.00336185 30.2468 0.194537 50.6834 19.3153

M07626_2.00_rc_shift9 (ZNF282_rc)
; positions_6nt_m2 versus M07626_2.00_rc (ZNF282_rc); m=129/158; ncol2=6; w=0; offset=4; strand=R; shift=9; score=0.43293; ---------sGGGAG-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0.0795234 0.0795234 0.0795234 0.0795234 99.7614 0.0795234 0 0 c 0 0 0 0 0 0 0 0 0 42.9372 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 0 0 g 0 0 0 0 0 0 0 0 0 56.9037 99.7614 99.7614 99.7614 0.0795234 99.7614 0 0 t 0 0 0 0 0 0 0 0 0 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 0 0

M00134_2.00_rc_shift9 (M00134_2.00_rc)
; positions_6nt_m2 versus M00134_2.00_rc; m=130/158; ncol2=10; w=0; offset=4; strand=R; shift=9; score=0.431979; ---------dGGGcGkg ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 32.22 17.485 0.0271748 0 10.0743 1.52107 4.2318 20.8085 c 0 0 0 0 0 0 0 0 0 7.71053 0.0228534 0.0173274 0.0241075 66.0217 0.0320459 8.95871 7.65501 g 0 0 0 0 0 0 0 0 0 25.8571 82.3801 99.9363 99.9596 1.03044 97.4574 35.2557 53.8047 t 0 0 0 0 0 0 0 0 0 34.2124 0.112067 0.0191497 0.00886864 22.8736 0.989471 51.5538 17.7318

M07754_2.00_rc_shift9 (ZNF468_rc)
; positions_6nt_m2 versus M07754_2.00_rc (ZNF468_rc); m=131/158; ncol2=12; w=0; offset=4; strand=R; shift=9; score=0.429964; ---------dGGGAGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 34.5652 4.71014 0.362319 0.0724638 96.3043 0.362319 0.0724638 11.3768 c 0 0 0 0 0 0 0 0 0 8.76812 0.942029 0.362319 0.0724638 0.652174 0.0724638 0.0724638 0.0724638 g 0 0 0 0 0 0 0 0 0 30.7971 93.4058 98.3333 99.7826 0.0724638 99.4928 99.7826 88.4783 t 0 0 0 0 0 0 0 0 0 25.8696 0.942029 0.942029 0.0724638 2.97101 0.0724638 0.0724638 0.0724638

M08243_2.00_rc_shift9 (KLF4_rc)
; positions_6nt_m2 versus M08243_2.00_rc (KLF4_rc); m=132/158; ncol2=10; w=0; offset=4; strand=R; shift=9; score=0.42731; ---------wGGGyGkG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 33.8558 2.028 0.3227 0.3225 6.3696 0.5068 0.9675 6.0875 c 0 0 0 0 0 0 0 0 0 1.8688 0.2081 0.3 0.8289 44.1938 0.346 1.8427 1.0613 g 0 0 0 0 0 0 0 0 0 23.5703 97.6252 99.0776 98.4801 0.2536 98.364 50.1722 89.9686 t 0 0 0 0 0 0 0 0 0 40.7052 0.1386 0.2997 0.3685 49.183 0.7831 47.0176 2.8826

M08246_2.00_rc_shift9 (KLF10_rc)
; positions_6nt_m2 versus M08246_2.00_rc (KLF10_rc); m=133/158; ncol2=10; w=0; offset=4; strand=R; shift=9; score=0.427309; ---------wGGGyGkG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 33.8557 2.0279 0.3227 0.3225 6.3696 0.5068 0.9675 6.0874 c 0 0 0 0 0 0 0 0 0 1.8688 0.2082 0.3001 0.8289 44.1938 0.3461 1.8427 1.0613 g 0 0 0 0 0 0 0 0 0 23.5703 97.6252 99.0777 98.4802 0.2537 98.3641 50.1723 89.9687 t 0 0 0 0 0 0 0 0 0 40.7052 0.1386 0.2997 0.3685 49.183 0.7831 47.0175 2.8825

M08920_2.00_rc_shift4 (SP3,SP6_rc)
; positions_6nt_m2 versus M08920_2.00_rc (SP3,SP6_rc); m=134/158; ncol2=20; w=-1; offset=-1; strand=R; shift=4; score=0.425647; ----gggrggGGGcGGG ; cor=; Ncor= a 0 0 0 0 20.7605 17.5602 22.8012 27.6205 17.1837 12.0783 13.8554 0.240964 0.963855 23.4488 4.44277 0.722892 18.9458 c 0 0 0 0 22.6431 21.8373 22.003 21.9277 19.9699 7.5 0.240964 1.0241 1.95783 62.756 3.43373 1.4759 3.49398 g 0 0 0 0 41.8599 47.4849 43.9006 38.9307 55.4669 63.8253 85.4819 97.741 96.6265 5.06024 89.0211 87.1687 71.9277 t 0 0 0 0 14.7364 13.1175 11.2952 11.5211 7.37952 16.5964 0.421687 0.993976 0.451807 8.73494 3.10241 10.6325 5.63253

M08978_2.00_rc_shift4 (M08978_2.00_rc)
; positions_6nt_m2 versus M08978_2.00_rc; m=135/158; ncol2=20; w=-1; offset=-1; strand=R; shift=4; score=0.425647; ----gggrggGGGcGGG ; cor=; Ncor= a 0 0 0 0 20.7605 17.5602 22.8012 27.6205 17.1837 12.0783 13.8554 0.240964 0.963855 23.4488 4.44277 0.722892 18.9458 c 0 0 0 0 22.6431 21.8373 22.003 21.9277 19.9699 7.5 0.240964 1.0241 1.95783 62.756 3.43373 1.4759 3.49398 g 0 0 0 0 41.8599 47.4849 43.9006 38.9307 55.4669 63.8253 85.4819 97.741 96.6265 5.06024 89.0211 87.1687 71.9277 t 0 0 0 0 14.7364 13.1175 11.2952 11.5211 7.37952 16.5964 0.421687 0.993976 0.451807 8.73494 3.10241 10.6325 5.63253

M08290_2.00_rc_shift10 (MAZ_rc)
; positions_6nt_m2 versus M08290_2.00_rc (MAZ_rc); m=136/158; ncol2=9; w=0; offset=5; strand=R; shift=10; score=0.425397; ----------GGGmGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 11.0911 0.059952 0.059952 55.6954 0.059952 0.059952 0.059952 c 0 0 0 0 0 0 0 0 0 0 0.059952 0.059952 0.059952 35.3118 0.059952 0.059952 0.059952 g 0 0 0 0 0 0 0 0 0 0 88.789 99.8201 99.8201 0.059952 99.8201 99.8201 99.8201 t 0 0 0 0 0 0 0 0 0 0 0.059952 0.059952 0.059952 8.93285 0.059952 0.059952 0.059952

M04410_2.00_rc_shift3 (KLF5_rc)
; positions_6nt_m2 versus M04410_2.00_rc (KLF5_rc); m=137/158; ncol2=10; w=-2; offset=-2; strand=R; shift=3; score=0.422937; ---dGGGyGTGgb---- ; cor=; Ncor= a 0 0 0 27.467 15.2442 3.03207 3.67347 12.1131 6.19572 7.08447 11.5128 7.32782 13.522 0 0 0 0 c 0 0 0 5.65682 1.57869 0 2.91545 47.3512 0 0 0 5.06887 29.7484 0 0 0 0 g 0 0 0 35.5123 78.4904 92.7697 92.7697 3.18452 92.1251 20.663 88.4872 67.2727 26.3522 0 0 0 0 t 0 0 0 31.3639 4.68673 4.19825 0.641399 37.3512 1.67921 72.2525 0 20.3306 30.3774 0 0 0 0

M04530_2.00_rc_shift7 (ZNF444_rc)
; positions_6nt_m2 versus M04530_2.00_rc (ZNF444_rc); m=138/158; ncol2=16; w=0; offset=2; strand=R; shift=7; score=0.42078; -------kGGGGGAGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 19.5687 0.100575 3.98243 0.500071 0.0288934 0.602064 98.7385 0.272401 0.18797 0.474411 c 0 0 0 0 0 0 0 9.19091 0.445402 0 0.171453 0.0866802 0.0716743 0.0286697 0.157706 0 0 g 0 0 0 0 0 0 0 42.1769 98.9943 95.7058 98.6998 99.7544 98.9392 0.874427 98.7814 99.812 99.1518 t 0 0 0 0 0 0 0 29.0635 0.45977 0.311791 0.628661 0.13002 0.387041 0.358372 0.78853 0 0.373778

M10186_2.00_rc_shift6 (KLF12_rc)
; positions_6nt_m2 versus M10186_2.00_rc (KLF12_rc); m=139/158; ncol2=7; w=0; offset=1; strand=R; shift=6; score=0.420576; ------CaGTggg---- ; cor=; Ncor= a 0 0 0 0 0 0 18.1818 63.6364 9.09091 0 18.1818 9.09091 18.1818 0 0 0 0 c 0 0 0 0 0 0 72.7273 18.1818 9.09091 18.1818 9.09091 9.09091 9.09091 0 0 0 0 g 0 0 0 0 0 0 0 0 81.8182 0 63.6364 63.6364 54.5455 0 0 0 0 t 0 0 0 0 0 0 9.09091 18.1818 0 81.8182 9.09091 18.1818 18.1818 0 0 0 0

M04529_2.00_rc_shift7 (ZNF444_rc)
; positions_6nt_m2 versus M04529_2.00_rc (ZNF444_rc); m=140/158; ncol2=16; w=0; offset=2; strand=R; shift=7; score=0.420384; -------kGGGGGAGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 22.5962 0.303242 4.67494 0.198714 0.175234 0.350426 98.6643 0.151568 0.350181 0.303596 c 0 0 0 0 0 0 0 7.24672 0.0349895 0.160809 0.0935126 0.0350467 0 0.139373 0.0466364 0.163418 0 g 0 0 0 0 0 0 0 44.137 99.4868 94.8771 99.6143 99.5794 99.5795 0.778165 99.1139 99.4631 99.5213 t 0 0 0 0 0 0 0 26.0202 0.174948 0.287158 0.0935126 0.21028 0.0700853 0.418118 0.687886 0.0233454 0.175152

M09583_2.00_rc_shift3 (OTP,SEBOX_rc)
; positions_6nt_m2 versus M09583_2.00_rc (OTP,SEBOX_rc); m=141/158; ncol2=10; w=-2; offset=-2; strand=R; shift=3; score=0.420057; ---aGCACGTGGs---- ; cor=; Ncor= a 0 0 0 60 9.9 0.1 92.3 0.1 0.1 8.3 2.3 9.9 12.9 0 0 0 0 c 0 0 0 14.3 9.6 92.3 2.3 99.7 2.3 5.4 4.9 15.2 26.1 0 0 0 0 g 0 0 0 19.4 69.6 0.1 2.6 0.1 95 0.1 87.9 68.1 49.3 0 0 0 0 t 0 0 0 6.3 10.9 7.5 2.8 0.1 2.6 86.2 4.9 6.8 11.6 0 0 0 0

M04467_2.00_rc_shift8 (ZNF740_rc)
; positions_6nt_m2 versus M04467_2.00_rc (ZNF740_rc); m=142/158; ncol2=13; w=0; offset=3; strand=R; shift=8; score=0.417794; --------GTGGGGGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.6334 3.28253 0.566101 0.771812 0.897606 0.740242 0.440529 1.25413 0.1001 c 0 0 0 0 0 0 0 0 1.33057 1.17233 0.566101 0.402685 0.49867 0.336474 0.169434 0.627063 1.2012 g 0 0 0 0 0 0 0 0 71.2892 12.5147 95.9374 97.7852 96.6755 97.7793 98.3734 95.8086 96.9303 t 0 0 0 0 0 0 0 0 7.7469 83.0305 2.9304 1.04027 1.92819 1.14401 1.0166 2.31023 1.76844

M09502_2.00_rc_shift9 (KLF5_rc)
; positions_6nt_m2 versus M09502_2.00_rc (KLF5_rc); m=143/158; ncol2=10; w=0; offset=4; strand=R; shift=9; score=0.417067; ---------wGGGyGkG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 36.4 11.6 0.1 0.1 8.1 1.5 4.6 5.5 c 0 0 0 0 0 0 0 0 0 5.5 0.1 0.1 0.1 42.8 0.1 2.3 0.1 g 0 0 0 0 0 0 0 0 0 22.4 88.2 99.7 99.7 0.1 97.2 40.5 92.2 t 0 0 0 0 0 0 0 0 0 35.7 0.1 0.1 0.1 49 1.2 52.6 2.2

M04468_2.00_rc_shift8 (ZNF740_rc)
; positions_6nt_m2 versus M04468_2.00_rc (ZNF740_rc); m=144/158; ncol2=13; w=0; offset=3; strand=R; shift=8; score= 0.4159; --------GTGGGGGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.5076 3.52157 0.881335 0 2.01342 4.78005 0.504868 0.92824 4.88812 c 0 0 0 0 0 0 0 0 0.17948 0.729695 22.4426 0 0 0.311742 0.036062 1.21385 1.13597 g 0 0 0 0 0 0 0 0 71.4927 11.2627 76.6761 97.33 96.609 92.345 98.7018 96.9654 93.8726 t 0 0 0 0 0 0 0 0 6.82022 84.486 0 2.66999 1.37761 2.56321 0.757303 0.892538 0.10327

M04411_2.00_rc_shift3 (KLF5_rc)
; positions_6nt_m2 versus M04411_2.00_rc (KLF5_rc); m=145/158; ncol2=10; w=-2; offset=-2; strand=R; shift=3; score=0.413803; ---wgGGyGTGkc---- ; cor=; Ncor= a 0 0 0 36.3338 22.7625 3.26816 7.09799 8.58881 3.88792 8.9955 4.24482 9.46489 14.723 0 0 0 0 c 0 0 0 10.605 3.9671 5.31077 1.60176 64.2172 0 8.9955 1.54656 5.62945 43.7682 0 0 0 0 g 0 0 0 21.7566 66.3764 80.07 86.1809 0.585069 96.1121 13.4433 90.2929 52.5827 16.691 0 0 0 0 t 0 0 0 31.3047 6.89405 11.351 5.11935 26.6089 0 68.5657 3.91576 32.3229 24.8178 0 0 0 0

M08342_2.00_rc_shift7 (ZNF596_rc)
; positions_6nt_m2 versus M08342_2.00_rc (ZNF596_rc); m=146/158; ncol2=15; w=0; offset=2; strand=R; shift=7; score=0.41348; -------rgrrrGAGvS ; cor=; Ncor= a 0 0 0 0 0 0 0 47.4133 15.3939 47.4132 31.6496 34.113 0.123152 99.1379 0.123152 30.172 2.58618 c 0 0 0 0 0 0 0 17.8576 11.4537 20.8132 14.9013 4.064 0.123152 0.123152 0.123152 29.68 69.0883 g 0 0 0 0 0 0 0 27.7096 67.61 28.2022 50.8622 47.4143 99.6305 0.615758 99.6305 32.6358 28.2023 t 0 0 0 0 0 0 0 7.01949 5.54229 3.5714 2.58681 14.4087 0.123152 0.123152 0.123152 7.51224 0.123152

M04091_2.00_rc_shift3 (HES1,HES4_rc)
; positions_6nt_m2 versus M04091_2.00_rc (HES1,HES4_rc); m=147/158; ncol2=10; w=-2; offset=-2; strand=R; shift=3; score=0.413345; ---ggyrcGtrks---- ; cor=; Ncor= a 0 0 0 18.1115 23.8439 21.5269 53.5168 20.7317 17.5066 8.99358 28.5476 15.3846 0 0 0 0 0 c 0 0 0 12.6935 6.50289 38.9237 2.44648 47.4085 0 12.4197 7.84641 22.1154 28.5714 0 0 0 0 g 0 0 0 48.1424 44.9422 13.7672 41.5902 14.6341 82.4934 11.9914 51.9199 28.5256 48.0296 0 0 0 0 t 0 0 0 21.0526 24.711 25.7822 2.44648 17.2256 0 66.5953 11.6861 33.9744 23.399 0 0 0 0

M04044_2.00_rc_shift3 (ATF6B_rc)
; positions_6nt_m2 versus M04044_2.00_rc (ATF6B_rc); m=148/158; ncol2=10; w=-2; offset=-2; strand=R; shift=3; score=0.413127; ---ACATCGTGGk---- ; cor=; Ncor= a 0 0 0 74.9638 0 87.3524 14.9618 3.64583 0.572519 0.192308 0 1.07335 7.50408 0 0 0 0 c 0 0 0 6.5123 97.5518 0 3.35878 89.9306 0.572519 0.192308 0.94518 0.357782 8.15661 0 0 0 0 g 0 0 0 5.64399 0 7.08263 2.59542 3.81944 98.855 0 97.9206 92.6655 27.8956 0 0 0 0 t 0 0 0 12.8799 2.44821 5.56492 79.084 2.60417 0 99.6154 1.13422 5.9034 56.4437 0 0 0 0

M00938_2.00_rc_shift4 (MAX_rc)
; positions_6nt_m2 versus M00938_2.00_rc (MAX_rc); m=149/158; ncol2=8; w=-1; offset=-1; strand=R; shift=4; score=0.413103; ----gCACGTGG----- ; cor=; Ncor= a 0 0 0 0 24.4189 0 83.1883 0 16.0333 4.62165 0 8.34127 0 0 0 0 0 c 0 0 0 0 8.14737 99.9758 0.00763126 77.0833 0.00763126 10.0046 0.00861772 3.58163 0 0 0 0 0 g 0 0 0 0 47.6639 0.00806192 15.2701 0.00763126 83.9515 0.776684 95.6653 72.5964 0 0 0 0 0 t 0 0 0 0 19.7699 0.00806192 1.53388 22.9014 0.00763126 84.597 4.31748 15.4807 0 0 0 0 0

M04469_2.00_rc_shift8 (ZNF740_rc)
; positions_6nt_m2 versus M04469_2.00_rc (ZNF740_rc); m=150/158; ncol2=13; w=0; offset=3; strand=R; shift=8; score=0.413004; --------gTGGGGGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 15.749 8.95722 0.338983 0.28222 0.556586 1.00733 1.36488 1.46386 0.0847458 c 0 0 0 0 0 0 0 0 3.45711 4.54545 0.508475 0.28222 0.649351 0.274725 0.636943 0.365965 1.18644 g 0 0 0 0 0 0 0 0 67.5416 15.9759 89.4068 99.2474 97.8664 96.6117 95.9964 96.5233 89.4068 t 0 0 0 0 0 0 0 0 13.2522 70.5214 9.74576 0.188147 0.927644 2.10623 2.00182 1.64684 9.32203

M08894_2.00_rc_shift9 (KLF4_rc)
; positions_6nt_m2 versus M08894_2.00_rc (KLF4_rc); m=151/158; ncol2=10; w=0; offset=4; strand=R; shift=9; score=0.411301; ---------wGGGyGkG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 42 0.8 0.2 1.2 2.6 0.4 0.4 5 c 0 0 0 0 0 0 0 0 0 2 0 0 0.4 44.4 0.4 0.4 1.6 g 0 0 0 0 0 0 0 0 0 20.4 98.8 99.2 97.8 0.4 99.2 43.8 88.6 t 0 0 0 0 0 0 0 0 0 35.6 0.4 0.6 0.6 52.6 0 55.4 4.8

M04470_2.00_rc_shift8 (ZNF740_rc)
; positions_6nt_m2 versus M04470_2.00_rc (ZNF740_rc); m=152/158; ncol2=13; w=0; offset=3; strand=R; shift=8; score=0.408437; --------GtGGGGGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 16.048 7.22656 0.739827 0 0.21692 0 0 0.216606 0.555556 c 0 0 0 0 0 0 0 0 1.74672 11.2793 9.98767 0 0 0.0722543 0 0 0 g 0 0 0 0 0 0 0 0 75.1638 14.2578 84.8952 100 99.5662 99.4942 99.5662 99.4224 95.625 t 0 0 0 0 0 0 0 0 7.04148 67.2363 4.37731 0 0.21692 0.433526 0.433839 0.361011 3.81944

M09505_2.00_rc_shift10 (MAZ_rc)
; positions_6nt_m2 versus M09505_2.00_rc (MAZ_rc); m=153/158; ncol2=8; w=0; offset=5; strand=R; shift=10; score=0.407698; ----------GGGgGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.9 0.1 13.2 19 9 4.7 4.2 c 0 0 0 0 0 0 0 0 0 0 0.1 0.1 8.2 14.9 6.1 5.8 0.1 g 0 0 0 0 0 0 0 0 0 0 98.9 99.7 70.2 60.7 84.8 89.4 95.6 t 0 0 0 0 0 0 0 0 0 0 0.1 0.1 8.4 5.4 0.1 0.1 0.1

M08021_2.00_rc_shift9 (M08021_2.00_rc)
; positions_6nt_m2 versus M08021_2.00_rc; m=154/158; ncol2=11; w=0; offset=4; strand=R; shift=9; score=0.407127; ---------wGGGyGkG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 38.206 1.3289 0 0 10.6312 0 3.9867 9.63459 c 0 0 0 0 0 0 0 0 0 2.6578 0 0 0 36.8771 0 0.996699 0 g 0 0 0 0 0 0 0 0 0 19.6013 98.6711 100 100 0 100 49.5017 86.7109 t 0 0 0 0 0 0 0 0 0 39.5349 0 0 0 52.4917 0 45.515 3.6545

M03704_2.00_rc_shift3 (M03704_2.00_rc)
; positions_6nt_m2 versus M03704_2.00_rc; m=155/158; ncol2=10; w=-2; offset=-2; strand=R; shift=3; score=0.406519; ---dGGGyGTGGy---- ; cor=; Ncor= a 0 0 0 25.8413 6.81151 1.49165 0.759013 2.63873 0.127307 3.91539 4.86147 6.03282 2.87056 0 0 0 0 c 0 0 0 5.35937 0.0587199 1.43198 0 60.8847 0 5.49055 3.816 4.92278 43.8935 0 0 0 0 g 0 0 0 29.4558 92.1315 93.6158 99.241 1.39697 99.8727 19.982 82.0178 75.7239 15.2401 0 0 0 0 t 0 0 0 39.3436 0.998238 3.46062 0 35.0795 0 70.6121 9.30476 13.3205 37.9958 0 0 0 0

M01726_2.00_rc_shift3 (HES4_rc)
; positions_6nt_m2 versus M01726_2.00_rc (HES4_rc); m=156/158; ncol2=10; w=-2; offset=-2; strand=R; shift=3; score=0.40642; ---grcrCGTGss---- ; cor=; Ncor= a 0 0 0 20.0446 32.0634 16.8007 34.7853 2.56595 8.18562 8.23209 7.10715 9.57363 17.8062 0 0 0 0 c 0 0 0 19.8451 15.1457 66.1167 6.68051 76.8864 5.59783 14.1263 1.42063 39.6073 37.6958 0 0 0 0 g 0 0 0 38.3962 30.1962 11.2619 46.9552 4.06466 83.2942 3.34692 87.4529 29.9345 25.7787 0 0 0 0 t 0 0 0 21.714 22.5947 5.82071 11.579 16.483 2.92232 74.2947 4.01927 20.8846 18.7192 0 0 0 0

M07662_2.00_rc_shift2 (HKR1_rc)
; positions_6nt_m2 versus M07662_2.00_rc (HKR1_rc); m=157/158; ncol2=21; w=-3; offset=-3; strand=R; shift=2; score=0.404771; --skgsrcyrgGGAGGa ; cor=; Ncor= a 0 0 19.5975 10.6992 12.8178 14.089 58.1568 19.1737 15.7839 48.8347 23.411 0.105932 16.2076 99.6822 0.529661 3.49576 64.9364 c 0 0 36.1229 17.0551 11.1229 30.6144 8.15678 53.9195 30.6144 9.42797 0.105932 0.105932 0.95339 0.105932 0.105932 0.105932 15.3602 g 0 0 36.5466 38.2415 62.8178 46.7161 31.8856 20.0212 24.2585 32.7331 57.3093 99.6822 82.7331 0.105932 99.2585 96.2924 16.2076 t 0 0 7.73305 34.0042 13.2415 8.58051 1.80085 6.88559 29.3432 9.00424 19.1737 0.105932 0.105932 0.105932 0.105932 0.105932 3.49576

M04457_2.00_rc_shift3 (KLF16_rc)
; positions_6nt_m2 versus M04457_2.00_rc (KLF16_rc); m=158/158; ncol2=10; w=-2; offset=-2; strand=R; shift=3; score=0.403272; ---kGGGcGkGgy---- ; cor=; Ncor= a 0 0 0 15.6742 10.6068 2.30783 3.26686 6.32828 2.27954 7.17561 8.41568 9.95327 9.59689 0 0 0 0 c 0 0 0 3.76509 3.21906 3.18008 1.82336 56.8721 0 9.23888 4.04845 11.3551 35.8502 0 0 0 0 g 0 0 0 52.9773 78.6577 88.8061 92.8205 13.1345 97.7205 27.5676 77.8929 57.0911 22.5292 0 0 0 0 t 0 0 0 27.5834 7.5165 5.70598 2.08927 23.6651 0 56.0179 9.64297 21.6005 32.0237 0 0 0 0

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv5_m1_shift6 ; 216 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv5_m1_shift6 (oligos_7nt_mkv5_m1)
; oligos_7nt_mkv5_m1; m=0 (reference); ncol1=15; shift=6; ncol=21; ------scCCCGCCCCCGCss ; Alignment reference a 0 0 0 0 0 0 2450 2321 676 651 709 1073 528 559 639 653 657 1736 849 2848 2334 c 0 0 0 0 0 0 9452 10145 16891 18012 18449 853 18454 18085 16584 18248 18105 2358 17333 9971 8891 g 0 0 0 0 0 0 5624 5125 2558 1788 1250 17496 1507 1616 2810 1482 1471 15021 2095 5424 6544 t 0 0 0 0 0 0 3540 3475 941 615 658 1644 577 806 1033 683 833 1951 789 2823 3297

M08092_2.00_shift6 (SP2)
; oligos_7nt_mkv5_m1 versus M08092_2.00 (SP2); m=1/215; ncol2=15; w=0; offset=0; strand=D; shift=6; score=0.872149; ------gyCCCGCCyCyyccs ; cor=; Ncor= a 0 0 0 0 0 0 9.48992 2.31317 3.08422 0 0 10.3203 0 0 0 12.2183 6.82088 11.0913 13.4045 13.5231 12.0403 c 0 0 0 0 0 0 15.0059 48.102 82.2064 99.5848 97.4496 0 100 98.2206 65.7177 70.9371 57.5919 32.8588 42.5267 47.0937 44.1874 g 0 0 0 0 0 0 60.9727 15.2432 0.059312 0.415184 0 75.9193 0 0 0 0 5.87189 19.2764 23.7841 24.1993 25.0297 t 0 0 0 0 0 0 14.5314 34.3416 14.6501 0 2.55042 13.7604 0 1.77936 34.2823 16.8446 29.7153 36.7734 20.2847 15.1839 18.7426

M08996_2.00_shift7 (M08996_2.00)
; oligos_7nt_mkv5_m1 versus M08996_2.00; m=2/215; ncol2=14; w=0; offset=1; strand=D; shift=7; score=0.864183; -------cyCCgCCCmCgCmc ; cor=; Ncor= a 0 0 0 0 0 0 0 10.5691 10.3659 16.8699 0.406504 23.9837 0 0.609756 0 44.9187 1.01626 16.2602 1.42276 35.1626 10.7724 c 0 0 0 0 0 0 0 57.7236 54.878 77.8455 98.9837 0 100 98.9837 96.3415 54.4715 98.7805 1.21951 89.6341 33.9431 47.1545 g 0 0 0 0 0 0 0 9.7561 8.53659 2.84553 0.609756 61.1789 0 0.406504 0.203252 0.203252 0 67.0732 3.86179 17.2764 19.3089 t 0 0 0 0 0 0 0 21.9512 26.2195 2.43902 0 14.8374 0 0 3.45528 0.406504 0.203252 15.4472 5.0813 13.6179 22.7642

M08317_2.00_shift6 (KLF10)
; oligos_7nt_mkv5_m1 versus M08317_2.00 (KLF10); m=3/215; ncol2=15; w=0; offset=0; strand=D; shift=6; score=0.849987; ------gcCmCRCCCCCyscc ; cor=; Ncor= a 0 0 0 0 0 0 5.6645 19.1721 3.9216 45.098 0 29.1939 0 0.2179 0.2179 19.1721 4.5752 16.5577 11.5468 11.5468 13.9434 c 0 0 0 0 0 0 17.8649 64.2702 87.3638 47.4946 94.5534 0 100 99.7821 89.3246 69.0632 69.281 28.976 38.9978 59.0414 49.4553 g 0 0 0 0 0 0 66.2309 6.5359 1.3072 7.4074 4.5752 68.8453 0 0 0 0.6536 4.793 23.3115 27.6688 20.0436 22.0044 t 0 0 0 0 0 0 10.2397 10.0218 7.4074 0 0.8715 1.9608 0 0 10.4575 11.1111 21.3508 31.1547 21.7865 9.3682 14.5969

M07928_2.00_shift7 (EGR1)
; oligos_7nt_mkv5_m1 versus M07928_2.00 (EGR1); m=4/215; ncol2=15; w=0; offset=1; strand=D; shift=7; score=0.820774; -------yyCCGCCCmCGCmc ; cor=; Ncor= a 0 0 0 0 0 0 0 10.2828 13.8817 14.91 0.7712 7.455 0 0 0 37.018 0 3.856 0.2571 33.419 10.2828 c 0 0 0 0 0 0 0 46.7866 40.1028 76.3496 98.7147 0 100 100 94.0874 61.9537 100 0 93.3162 28.5347 47.0437 g 0 0 0 0 0 0 0 17.7378 19.7943 2.5707 0 88.1748 0 0 0 1.0283 0 88.689 1.7995 22.108 23.1362 t 0 0 0 0 0 0 0 25.1928 26.2211 6.1697 0.5141 4.3702 0 0 5.9126 0 0 7.45501 4.6272 15.9383 19.5373

M08906_2.00_shift6 (ZNF281)
; oligos_7nt_mkv5_m1 versus M08906_2.00 (ZNF281); m=5/215; ncol2=15; w=0; offset=0; strand=D; shift=6; score=0.807023; ------yCCCCTCCCCCwccc ; cor=; Ncor= a 0 0 0 0 0 0 9.12863 2.48963 1.65975 1.03734 12.8631 12.6556 0.414938 0.622407 0.622407 1.65975 1.03734 47.0954 14.1079 10.3734 13.278 c 0 0 0 0 0 0 27.1784 87.3444 94.1909 97.9253 74.0664 0.207469 96.473 97.9253 89.6266 97.5104 96.888 17.4274 50.8299 60.3734 45.8506 g 0 0 0 0 0 0 24.8963 1.65975 0.622407 0 0.207469 10.9959 0.414938 0.414938 1.65975 0.414938 0.829876 7.67635 18.0498 8.92116 17.8423 t 0 0 0 0 0 0 38.7967 8.50622 3.52697 1.03734 12.8631 76.1411 2.6971 1.03734 8.09129 0.414938 1.24481 27.8008 17.0124 20.332 23.029

M08994_2.00_shift6 (M08994_2.00)
; oligos_7nt_mkv5_m1 versus M08994_2.00; m=6/215; ncol2=14; w=0; offset=0; strand=D; shift=6; score=0.789505; ------ccyCCrCCCMCrCm- ; cor=; Ncor= a 0 0 0 0 0 0 10.6 17.6 11 19 3.2 32 0 1 0.8 68.2 1.8 31.2 4.4 30.2 0 c 0 0 0 0 0 0 50 52.8 54.2 73 92.4 1.4 98 98.4 92.6 29.6 95 6.8 72.8 41.8 0 g 0 0 0 0 0 0 17 10.8 9.6 0.8 1.6 41.8 1.8 0.4 0.4 1.4 1.2 39.8 13.4 14.2 0 t 0 0 0 0 0 0 22.4 18.8 25.2 7.2 2.8 24.8 0.2 0.2 6.2 0.8 2 22.2 9.4 13.8 0

M08882_2.00_shift6 (EGR1)
; oligos_7nt_mkv5_m1 versus M08882_2.00 (EGR1); m=7/215; ncol2=17; w=0; offset=0; strand=D; shift=6; score=0.764026; ------yyyCCrCCCmCgCmy ; cor=; Ncor= a 0 0 0 0 0 0 11.8 15 12.8 17.2 6 30 1.4 2.2 1.4 55.4 4 21.2 5 29.8 8.2 c 0 0 0 0 0 0 43.6 45.6 40.6 69.6 84.2 0.4 93 95.8 89.2 41 87 4.6 80.8 35.4 46 g 0 0 0 0 0 0 18.2 8.2 12.8 2.2 1 47.6 3.2 0.4 0.2 0.4 3.4 50.6 3 11.2 18 t 0 0 0 0 0 0 26.4 31.2 33.8 11 8.8 22 2.4 1.6 9.2 3.2 5.6 23.6 11.2 23.6 27.8

M06072_2.00_shift7 (M06072_2.00)
; oligos_7nt_mkv5_m1 versus M06072_2.00; m=8/215; ncol2=14; w=0; offset=1; strand=D; shift=7; score=0.743688; -------hmmCGCCCmCvymm ; cor=; Ncor= a 0 0 0 0 0 0 0 27.7778 26.3158 47.3684 10.5263 15.7895 0 0 0 57.8947 0 31.5789 10.5263 57.8947 26.3158 c 0 0 0 0 0 0 0 44.4444 47.3684 47.3684 84.2105 0 100 94.7368 100 36.8421 100 26.3158 52.6316 26.3158 47.3684 g 0 0 0 0 0 0 0 0 21.0526 5.26316 0 73.6842 0 5.26316 0 0 0 42.1053 5.26316 5.26316 5.26316 t 0 0 0 0 0 0 0 27.7778 5.26316 0 5.26316 10.5263 0 0 0 5.26316 0 0 31.5789 10.5263 21.0526

M06073_2.00_shift7 (M06073_2.00)
; oligos_7nt_mkv5_m1 versus M06073_2.00; m=9/215; ncol2=14; w=0; offset=1; strand=D; shift=7; score=0.740478; -------mcmCrCCCmCrcmm ; cor=; Ncor= a 0 0 0 0 0 0 0 27.4252 23.9949 36.4842 8.51155 32.763 1.62532 0 1.66809 67.408 0.342173 30.8811 15.6544 40.3372 25.6059 c 0 0 0 0 0 0 0 32.4569 37.3824 47.6476 81.9076 3.89222 98.3747 100 83.2763 29.8118 99.6578 13.6869 59.0248 25.4215 38.9118 g 0 0 0 0 0 0 0 20.8976 15.0128 6.97177 3.84944 51.0693 0 0 0 0.25663 0 46.1078 9.83747 20.882 15.5464 t 0 0 0 0 0 0 0 19.2203 23.6099 8.89649 5.73139 12.2754 0 0 15.0556 2.52352 0 9.32421 15.4833 13.3593 19.936

M05860_2.00_shift7 (M05860_2.00)
; oligos_7nt_mkv5_m1 versus M05860_2.00; m=10/215; ncol2=13; w=0; offset=1; strand=D; shift=7; score=0.731073; -------cymCGCCCmCGCa- ; cor=; Ncor= a 0 0 0 0 0 0 0 22.4 21 32.6 1 22.2 0.1 0.1 0.1 64.5 0.1 12.8 3.5 41 0 c 0 0 0 0 0 0 0 32.3 31.8 51.5 93.5 0.7 99.7 99.8 92.1 35.1 99.8 3.2 71.6 22.3 0 g 0 0 0 0 0 0 0 22.9 19.3 8.6 0.9 69.5 0.1 0.1 0.1 0.2 0.1 71 7.5 22.2 0 t 0 0 0 0 0 0 0 22.4 27.9 7.3 4.6 7.6 0.1 0.1 7.7 0.1 0.1 13.1 17.5 14.5 0

M07642_2.00_shift6 (ZNF519)
; oligos_7nt_mkv5_m1 versus M07642_2.00 (ZNF519); m=11/215; ncol2=15; w=0; offset=0; strand=D; shift=6; score=0.72823; ------csgCsGCmGCCGCCC ; cor=; Ncor= a 0 0 0 0 0 0 6.41667 15.0833 10.4167 7.75 11.75 3.41667 0.0833333 29.0833 2.75 0.0833333 0.0833333 2.41667 0.0833333 0.0833333 1.08333 c 0 0 0 0 0 0 66.75 48.75 12.0833 80.0833 42.4167 7.41667 99.75 46.0833 6.41667 99.75 81.0833 0.0833333 99.75 99.4167 86.4167 g 0 0 0 0 0 0 18.75 26.4167 65.0833 8.75 25.4167 85.0833 0.0833333 7.75 86.4167 0.0833333 0.416667 75.4167 0.0833333 0.416667 11.0833 t 0 0 0 0 0 0 8.08333 9.75 12.4167 3.41667 20.4167 4.08333 0.0833333 17.0833 4.41667 0.0833333 18.4167 22.0833 0.0833333 0.0833333 1.41667

M04438_2.00_shift8 (EGR1)
; oligos_7nt_mkv5_m1 versus M04438_2.00 (EGR1); m=12/215; ncol2=13; w=0; offset=2; strand=D; shift=8; score=0.726619; --------cmCrCCCmCgcmc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.812 28.5357 7.63283 29.7004 2.48685 4.75973 4.16748 54.8634 0.170648 22.7166 8.27459 31.8616 19.8425 c 0 0 0 0 0 0 0 0 41.1735 47.1176 78.0531 7.48997 94.1416 90.0915 77.0299 32.5111 95.9776 13.8829 66.0792 31.813 44.6646 g 0 0 0 0 0 0 0 0 16.2306 10.4727 2.55749 46.4378 0.908656 2.746 4.40227 6.24303 0 42.2063 8.17388 21.4782 14.6341 t 0 0 0 0 0 0 0 0 22.7838 13.8739 11.7565 16.3718 2.46294 2.40275 14.4003 6.38239 3.85178 21.1943 17.4723 14.8472 20.8587

M04462_2.00_shift8 (EGR4)
; oligos_7nt_mkv5_m1 versus M04462_2.00 (EGR4); m=13/215; ncol2=13; w=0; offset=2; strand=D; shift=8; score=0.722059; --------ymCGCCCMCGCac ; cor=; Ncor= a 0 0 0 0 0 0 0 0 18.605 38.9584 0.633624 9.8065 0 0.0572574 0 72.8326 0 16.0613 1.10299 57.2542 24.1513 c 0 0 0 0 0 0 0 0 42.2801 56.974 98.2963 0.322504 99.7999 99.9284 95.7088 25.7694 99.9857 1.82149 89.5344 14.9184 45.2371 g 0 0 0 0 0 0 0 0 10.169 1.09935 0 83.3851 0.0428878 0 0.205648 1.14763 0.0143225 74.7991 2.70617 22.6933 8.738 t 0 0 0 0 0 0 0 0 28.9459 2.96826 1.07012 6.48591 0.157255 0.0143143 4.08555 0.250391 0 7.31812 6.65641 5.13409 21.8737

M04437_2.00_shift8 (EGR1)
; oligos_7nt_mkv5_m1 versus M04437_2.00 (EGR1); m=14/215; ncol2=13; w=0; offset=2; strand=D; shift=8; score=0.719005; --------cmCrCCCmCgCmm ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.713 33.137 9.66458 31.2385 1.54779 2.98439 5.56261 59.4771 0.032352 17.4956 7.29218 36.6286 25.5986 c 0 0 0 0 0 0 0 0 39.8983 41.6636 73.5642 8.67825 97.2874 93.3119 77.4321 33.5479 98.625 13.0649 74.9754 25.5198 40.7019 g 0 0 0 0 0 0 0 0 15.8413 12.5506 6.11728 48.8111 0.191479 1.72942 1.0414 4.23373 0.210288 60.1638 5.01722 21.9221 15.2345 t 0 0 0 0 0 0 0 0 19.5474 12.6488 10.654 11.2721 0.973352 1.97429 15.9639 2.7412 1.13232 9.27571 12.7152 15.9295 18.4651

M08363_2.00_shift7 (SP1)
; oligos_7nt_mkv5_m1 versus M08363_2.00 (SP1); m=15/215; ncol2=15; w=0; offset=1; strand=D; shift=7; score=0.710919; -------CCCcsscyCCkCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 3 5.8 1.4 20.2 13.6 6.4 12.6 12 13.8 3.2 21.6 0 1 1.8 c 0 0 0 0 0 0 0 73.2 71.2 84 55.2 26.4 44 67.8 52.6 80 93.2 0 96.6 97.6 87 g 0 0 0 0 0 0 0 6.8 9.2 2.4 9.2 42.4 31.8 5.6 8.8 2.8 0 40.8 1.4 1.4 0 t 0 0 0 0 0 0 0 17 13.8 12.2 15.4 17.6 17.8 14 26.6 3.4 3.6 37.6 2 0 11.2

M08999_2.00_shift7 (M08999_2.00)
; oligos_7nt_mkv5_m1 versus M08999_2.00; m=16/215; ncol2=15; w=0; offset=1; strand=D; shift=7; score=0.702986; -------CCCCTCCCCCaccc ; cor=; Ncor= a 0 0 0 0 0 0 0 1.8 1 0 8.4 16.6 0 0 0 0 0 62.8 18.4 8.4 9.8 c 0 0 0 0 0 0 0 95.8 98.6 99.8 86.6 0.4 100 100 98.8 99.2 100 23.6 61.6 67.4 60 g 0 0 0 0 0 0 0 0.6 0 0 0 3.8 0 0 0 0 0 2.8 6.8 10.6 16 t 0 0 0 0 0 0 0 1.8 0.4 0.2 5 79.2 0 0 1.2 0.8 0 10.8 13.2 13.6 14.2

M08965_2.00_shift6 (M08965_2.00)
; oligos_7nt_mkv5_m1 versus M08965_2.00; m=17/215; ncol2=15; w=0; offset=0; strand=D; shift=6; score=0.700106; ------gCCmCdCCCwscccc ; cor=; Ncor= a 0 0 0 0 0 0 12.4248 5.01002 0.801603 27.4549 1.2024 42.6854 0.400802 0.200401 0.801603 34.4689 8.81764 11.6232 10.2204 12.2244 17.0341 c 0 0 0 0 0 0 7.81563 85.3707 94.3888 60.9218 94.3888 0.200401 97.7956 99.1984 94.7896 17.0341 29.0581 54.3086 55.1102 66.1323 47.6954 g 0 0 0 0 0 0 59.519 3.80762 0.601202 3.00601 1.002 30.8617 0.801603 0.200401 0 2.20441 46.2926 17.8357 14.8297 9.01804 11.022 t 0 0 0 0 0 0 20.2405 5.81162 4.20842 8.61723 3.40681 26.2525 1.002 0.400802 4.40882 46.2926 15.8317 16.2325 19.8397 12.6253 24.2485

M08323_2.00_shift7 (KLF15)
; oligos_7nt_mkv5_m1 versus M08323_2.00 (KLF15); m=18/215; ncol2=15; w=0; offset=1; strand=D; shift=7; score=0.698071; -------ccCcggCyCCgCCY ; cor=; Ncor= a 0 0 0 0 0 0 0 5.4217 3.8153 6.4257 13.6546 16.2651 9.6386 2.6104 9.4378 8.2329 0 18.8755 0 0 0 c 0 0 0 0 0 0 0 65.261 64.0562 70.8835 62.4498 23.0924 24.8996 85.3414 47.5904 88.755 100 0 99.1968 100 70.8835 g 0 0 0 0 0 0 0 16.4659 17.8715 5.4217 8.8353 36.1446 46.1847 0 1.2048 3.012 0 58.8353 0.2008 0 0.8032 t 0 0 0 0 0 0 0 12.8514 14.257 17.2691 15.0602 24.498 19.2771 12.0482 41.7671 0 0 22.2892 0.6024 0 28.3133

M07927_2.00_shift1 (EGR1)
; oligos_7nt_mkv5_m1 versus M07927_2.00 (EGR1); m=19/215; ncol2=20; w=-5; offset=-5; strand=D; shift=1; score=0.694841; -ccscscccCCGCCCmCGCmc ; cor=; Ncor= a 0 13.0705 16.1826 11.6183 17.0124 13.9004 13.0705 12.6556 12.0332 15.7676 1.0373 19.2946 0 0 0 43.5685 0 5.6017 0 37.1369 10.3734 c 0 48.1328 49.5851 44.1909 45.8506 38.1743 49.7925 47.3029 41.0788 76.3486 97.5104 0 100 100 94.6058 56.0166 100 0 92.1162 28.8382 45.8506 g 0 22.6141 22.8216 25.1037 18.4647 30.7054 20.5394 17.4274 21.9917 2.4896 0.2075 71.5768 0 0 0 0.4149 0 85.6846 4.3568 18.6722 24.2739 t 0 16.1826 11.4108 19.0871 18.6722 17.2199 16.5975 22.6141 24.8963 5.39421 1.2448 9.1286 0 0 5.3942 0 0 8.7137 3.527 15.3527 19.5021

M04461_2.00_shift8 (EGR4)
; oligos_7nt_mkv5_m1 versus M04461_2.00 (EGR4); m=20/215; ncol2=13; w=0; offset=2; strand=D; shift=8; score=0.688803; --------cmCGCCCACGCAm ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.0333 44.0628 0.720243 5.48356 0 0 0.120126 83.4085 0.154172 3.15973 0.132363 72.7656 29.7605 c 0 0 0 0 0 0 0 0 45.2245 51.0423 98.1425 0.343824 99.9614 99.8169 95.694 16.2371 99.788 0.597042 97.9106 8.1928 39.0498 g 0 0 0 0 0 0 0 0 8.91357 1.65304 0.15163 91.2986 0 0.115663 0.0646831 0.209407 0.0192715 95.1226 0.264725 13.9896 9.72383 t 0 0 0 0 0 0 0 0 24.8286 3.2418 0.985595 2.87402 0.03861 0.0674699 4.12123 0.144974 0.0385431 1.1206 1.69235 5.052 21.4658

M08025_2.00_shift7 (M08025_2.00)
; oligos_7nt_mkv5_m1 versus M08025_2.00; m=21/215; ncol2=15; w=0; offset=1; strand=D; shift=7; score=0.684075; -------CCCCTCCCCCmcCy ; cor=; Ncor= a 0 0 0 0 0 0 0 2.8571 0 0 6.66669 22.8571 0 0.9524 0.9524 3.8095 5.7143 59.0477 24.7619 6.66669 16.1905 c 0 0 0 0 0 0 0 94.2857 82.8571 100 80.9523 0.9524 100 98.0952 93.3333 93.3333 94.2857 27.619 45.7143 68.5713 40.9524 g 0 0 0 0 0 0 0 1.9048 0 0 0 4.7619 0 0 0.9524 0.9524 0 2.8571 17.1429 12.381 9.5238 t 0 0 0 0 0 0 0 0.9524 17.1429 0 12.381 71.4286 0 0.9524 4.7619 1.9048 0 10.4762 12.381 12.381 33.3333

M08967_2.00_shift4 (M08967_2.00)
; oligos_7nt_mkv5_m1 versus M08967_2.00; m=22/215; ncol2=19; w=-2; offset=-2; strand=D; shift=4; score=0.68071; ----cckCCCCkCCCCCwccs ; cor=; Ncor= a 0 0 0 0 7.6 9 7.2 0.8 3.4 1.2 2.8 6 0.2 1.8 3.4 5.2 2.4 32.2 9 9 5 c 0 0 0 0 58.2 53.2 12.8 87 82.2 93.2 84.4 1.2 98 88.4 77.6 81.8 90.2 15.8 67.4 58.6 45.6 g 0 0 0 0 21 14.4 44.2 4.4 0.4 1.6 0.6 29.2 0.4 1.4 2.8 5.2 3 22 15.2 14.6 31.6 t 0 0 0 0 13.2 23.4 35.8 7.8 14 4 12.2 63.6 1.4 8.4 16.2 7.8 4.4 30 8.4 17.8 17.8

M08880_2.00_shift5 (KLF9)
; oligos_7nt_mkv5_m1 versus M08880_2.00 (KLF9); m=23/215; ncol2=15; w=-1; offset=-1; strand=D; shift=5; score=0.679997; -----gGcCMCGCCCmCyyc- ; cor=; Ncor= a 0 0 0 0 0 14.4531 10.9375 16.0156 1.5625 71.875 0 23.0469 0 1.5625 0 32.0312 2.73438 9.76562 9.375 11.3281 0 c 0 0 0 0 0 20.3125 3.125 67.1875 97.6562 26.1719 100 0.390625 99.2188 98.0469 98.4375 63.2812 80.0781 26.5625 46.0938 63.6719 0 g 0 0 0 0 0 52.3438 84.375 11.7188 0.390625 1.5625 0 75.7812 0.78125 0.390625 0 0.390625 1.17188 13.6719 18.75 18.75 0 t 0 0 0 0 0 12.8906 1.5625 5.07812 0.390625 0.390625 0 0.78125 0 0 1.5625 4.29688 16.0156 50 25.7812 6.25 0

M04439_2.00_shift8 (EGR2)
; oligos_7nt_mkv5_m1 versus M04439_2.00 (EGR2); m=24/215; ncol2=13; w=0; offset=2; strand=D; shift=8; score=0.677887; --------mmCrCCCACGCac ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.001 40.4671 0.527831 25.1462 0 0.202327 1.18203 86.007 0 15.5957 0.790861 41.8363 23.923 c 0 0 0 0 0 0 0 0 40.446 43.3121 94.6737 1.00715 99.7472 99.7977 77.7384 13.8187 99.8482 2.85199 86.6872 18.8507 39.7364 g 0 0 0 0 0 0 0 0 12.367 5.64756 1.53551 64.1001 0.252781 0 0.197006 0.174368 0 71.2274 1.53779 23.4097 14.9518 t 0 0 0 0 0 0 0 0 21.186 10.5732 3.26296 9.74659 0 0 20.8826 0 0.151822 10.3249 10.9842 15.9033 21.3887

M02915_2.00_shift7 (EGR3)
; oligos_7nt_mkv5_m1 versus M02915_2.00 (EGR3); m=25/215; ncol2=15; w=0; offset=1; strand=D; shift=7; score=0.674393; -------yhmCGCCCMCGCAy ; cor=; Ncor= a 0 0 0 0 0 0 0 19.4798 26.747 58.5131 0.106952 2.87958 0 0 0 71.1479 0 1.73719 0.104004 80.6905 24.3844 c 0 0 0 0 0 0 0 37.2832 29.2169 39.7843 99.1979 1.39616 99.8924 99.4647 95.445 27.9312 99.5223 1.24722 98.752 3.45269 36.036 g 0 0 0 0 0 0 0 16.0694 11.506 0.567537 0 94.1536 0.107643 0 0.366492 0.675261 0.37155 95.8575 0.0520021 10.7417 6.60661 t 0 0 0 0 0 0 0 27.1676 32.5301 1.13507 0.695187 1.57068 0 0.535332 4.18848 0.245549 0.106157 1.15813 1.09204 5.11509 32.973

M08096_2.00_shift6 (SP1)
; oligos_7nt_mkv5_m1 versus M08096_2.00 (SP1); m=26/215; ncol2=11; w=0; offset=0; strand=D; shift=6; score=0.673861; ------gCCCCkCCCCy---- ; cor=; Ncor= a 0 0 0 0 0 0 9.81223 0 1.1335 0 0 15.5599 0 0 0 12.0678 7.46508 0 0 0 0 c 0 0 0 0 0 0 20.4488 71.1587 76.746 100 99.1642 0 100 100 76.4713 72.7845 56.8926 0 0 0 0 g 0 0 0 0 0 0 48.9008 7.35058 0 0 0 52.9425 0 0 0 0 8.40394 0 0 0 0 t 0 0 0 0 0 0 20.8381 21.4907 22.1204 0 0.835814 31.4976 0 0 23.5287 15.1477 27.2384 0 0 0 0

M10300_2.00_shift5 (SP1)
; oligos_7nt_mkv5_m1 versus M10300_2.00 (SP1); m=27/215; ncol2=13; w=-1; offset=-1; strand=D; shift=5; score=0.667933; -----vrcCCCGCCCccy--- ; cor=; Ncor= a 0 0 0 0 0 25 26.8519 8.33333 5.55556 7.40741 1.85185 8.33333 0 0 0.925926 17.5926 7.40741 18.5185 0 0 0 c 0 0 0 0 0 29.6296 19.4444 66.6667 70.3704 91.6667 91.6667 0 98.1481 100 82.4074 60.1852 51.8519 32.4074 0 0 0 g 0 0 0 0 0 37.037 50.9259 9.25926 4.62963 0.925926 4.62963 74.0741 1.85185 0 0.925926 9.25926 18.5185 19.4444 0 0 0 t 0 0 0 0 0 8.33333 2.77778 15.7407 19.4444 0 1.85185 17.5926 0 0 15.7407 12.963 22.2222 29.6296 0 0 0

M08398_2.00_shift5 (KLF14)
; oligos_7nt_mkv5_m1 versus M08398_2.00 (KLF14); m=28/215; ncol2=14; w=-1; offset=-1; strand=D; shift=5; score=0.662425; -----ggcCmCGCCCmCyy-- ; cor=; Ncor= a 0 0 0 0 0 22.5873 11.9097 9.2402 4.3121 37.7823 0 13.963 0 0 0 41.6838 2.6694 13.347 13.7577 0 0 c 0 0 0 0 0 13.7577 14.5791 60.9856 79.4661 61.3963 99.5893 0 100 100 92.4025 49.076 74.1273 45.9959 34.7023 0 0 g 0 0 0 0 0 57.2895 67.3511 7.3922 4.3121 0.8214 0 77.2074 0 0 0 0.8214 4.7228 8.0082 20.1232 0 0 t 0 0 0 0 0 6.3655 6.1602 22.3819 11.9097 0 0.4107 8.8296 0 0 7.5975 8.4189 18.4805 32.6489 31.4168 0 0

M08920_2.00_shift1 (SP3,SP6)
; oligos_7nt_mkv5_m1 versus M08920_2.00 (SP3,SP6); m=29/215; ncol2=20; w=-5; offset=-5; strand=D; shift=1; score=0.662225; -cscysgCCCCgCCCccyccc ; cor=; Ncor= a 0 12.6205 11.5512 11.6114 15.9639 20.5271 9.27711 3.70482 5.63253 10.6325 3.10241 8.73494 0.451807 0.993976 0.421687 16.5964 7.37952 11.5211 11.2952 13.1175 14.7364 c 0 44.9849 45.5572 51.5813 44.9849 31.5512 23.9157 73.4639 71.9277 87.1687 89.0211 5.06024 96.6265 97.741 85.4819 63.8253 55.4669 38.9307 43.9006 47.4849 41.8599 g 0 24.1867 26.506 16.747 13.2982 36.7169 55.3916 13.3133 3.49398 1.4759 3.43373 62.756 1.95783 1.0241 0.240964 7.5 19.9699 21.9277 22.003 21.8373 22.6431 t 0 18.2078 16.3855 20.0602 25.753 11.2048 11.4157 9.51807 18.9458 0.722892 4.44277 23.4488 0.963855 0.240964 13.8554 12.0783 17.1837 27.6205 22.8012 17.5602 20.7605

M08978_2.00_shift1 (M08978_2.00)
; oligos_7nt_mkv5_m1 versus M08978_2.00; m=30/215; ncol2=20; w=-5; offset=-5; strand=D; shift=1; score=0.662225; -cscysgCCCCgCCCccyccc ; cor=; Ncor= a 0 12.6205 11.5512 11.6114 15.9639 20.5271 9.27711 3.70482 5.63253 10.6325 3.10241 8.73494 0.451807 0.993976 0.421687 16.5964 7.37952 11.5211 11.2952 13.1175 14.7364 c 0 44.9849 45.5572 51.5813 44.9849 31.5512 23.9157 73.4639 71.9277 87.1687 89.0211 5.06024 96.6265 97.741 85.4819 63.8253 55.4669 38.9307 43.9006 47.4849 41.8599 g 0 24.1867 26.506 16.747 13.2982 36.7169 55.3916 13.3133 3.49398 1.4759 3.43373 62.756 1.95783 1.0241 0.240964 7.5 19.9699 21.9277 22.003 21.8373 22.6431 t 0 18.2078 16.3855 20.0602 25.753 11.2048 11.4157 9.51807 18.9458 0.722892 4.44277 23.4488 0.963855 0.240964 13.8554 12.0783 17.1837 27.6205 22.8012 17.5602 20.7605

M04583_2.00_shift8 (EGR3)
; oligos_7nt_mkv5_m1 versus M04583_2.00 (EGR3); m=31/215; ncol2=13; w=0; offset=2; strand=D; shift=8; score=0.659743; --------mmCGCCCACGCam ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.6547 52.8347 0.0796766 5.49078 0.0943341 0.170885 0.075841 92.8765 0.208989 4.05723 0.12021 62.8749 26.3763 c 0 0 0 0 0 0 0 0 37.4878 45.5584 99.9203 0.319454 99.8172 99.7614 82.8379 7.107 99.6674 0.331428 96.9118 9.8676 38.6503 g 0 0 0 0 0 0 0 0 11.9702 0.168541 0 92.4505 0.0619067 0.0530332 0.0171254 0 0.0677008 93.5178 0 17.1504 11.7041 t 0 0 0 0 0 0 0 0 23.8873 1.43841 0 1.73925 0.0265315 0.0147314 17.0691 0.0164577 0.0559268 2.09352 2.96803 10.1071 23.2693

M02886_2.00_shift7 (EGR2)
; oligos_7nt_mkv5_m1 versus M02886_2.00 (EGR2); m=32/215; ncol2=15; w=0; offset=1; strand=D; shift=7; score=0.65912; -------yhmCGCCCACGCah ; cor=; Ncor= a 0 0 0 0 0 0 0 24.8517 26.3117 48.7763 0.897729 9.80359 0.159943 0.284495 0.353833 87.7621 0 3.52679 0.339789 55.6715 27.4918 c 0 0 0 0 0 0 0 29.8259 28.5412 41.1833 97.3068 0.822562 99.2003 99.2176 84.92 11.2903 99.679 1.74628 91.2504 10.6025 30.5764 g 0 0 0 0 0 0 0 19.1314 13.4922 2.33186 0.457666 82.3737 0.390972 0.302276 0 0.584677 0.249643 90.6865 0.30581 20.1279 13.1483 t 0 0 0 0 0 0 0 26.1909 31.6548 7.70861 1.33779 7.00017 0.2488 0.19559 14.7262 0.362903 0.0713267 4.0404 8.10398 13.5981 28.7835

M04512_2.00_shift6 (KLF15)
; oligos_7nt_mkv5_m1 versus M04512_2.00 (KLF15); m=33/215; ncol2=12; w=0; offset=0; strand=D; shift=6; score=0.648534; ------rCCmCGCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 0 26.7918 15.1634 5.5098 65.5063 0.240964 13.6948 0.359368 0.120627 0.406939 26.0445 5.30621 13.4058 0 0 0 c 0 0 0 0 0 0 10.7319 70.854 81.1765 31.3766 99.759 1.54364 99.1854 99.8794 88.67 61.7603 71.1917 50.8454 0 0 0 g 0 0 0 0 0 0 51.6875 5.57933 9.43137 2.19937 0 81.9315 0.167705 0 0.321268 0.487805 3.16162 10.5556 0 0 0 t 0 0 0 0 0 0 10.7888 8.40322 3.88235 0.917722 0 2.83 0.287494 0 10.6018 11.7073 20.3405 25.1932 0 0 0

M04584_2.00_shift8 (EGR3)
; oligos_7nt_mkv5_m1 versus M04584_2.00 (EGR3); m=34/215; ncol2=13; w=0; offset=2; strand=D; shift=8; score=0.646555; --------hmCGCCCACGCRh ; cor=; Ncor= a 0 0 0 0 0 0 0 0 29.6397 41.0368 0 1.7082 0.269654 0.041632 0.100806 97.2458 0.207727 18.6845 0.38088 69.4734 30.1187 c 0 0 0 0 0 0 0 0 30.5978 58.1371 99.6472 0.542605 99.6059 99.9584 96.8145 2.7339 99.7507 0.832974 91.4492 2.53183 35.6176 g 0 0 0 0 0 0 0 0 13.5597 0.0413052 0.124507 96.5032 0.0829703 0 0.120968 0.0202511 0.0415455 68.9645 3.10417 25.6944 7.72756 t 0 0 0 0 0 0 0 0 26.2029 0.7848 0.228263 1.24598 0.0414852 0 2.96371 0 0 11.518 5.0657 2.30035 26.5361

M02883_2.00_shift8 (EGR1)
; oligos_7nt_mkv5_m1 versus M02883_2.00 (EGR1); m=35/215; ncol2=14; w=0; offset=2; strand=D; shift=8; score=0.640583; --------tmCGCCCmCGCAw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.9478 51.3906 0.322373 10.5203 0 0.260417 0 65.2638 0.325309 1.90616 1 68.0894 27.9057 c 0 0 0 0 0 0 0 0 24.1127 39.5405 96.9697 0.535578 98.0026 99.2839 92.8215 34.3593 99.5446 1.13636 93.8125 6.91057 24.8527 g 0 0 0 0 0 0 0 0 15.3967 3.62757 0.773694 85.4246 0.773196 0 0.93633 0 0 93.1818 1.1875 14.2276 12.5335 t 0 0 0 0 0 0 0 0 35.5428 5.44135 1.93424 3.51951 1.22423 0.455729 6.2422 0.376884 0.130124 3.77566 4 10.7724 34.7081

M04511_2.00_shift6 (KLF15)
; oligos_7nt_mkv5_m1 versus M04511_2.00 (KLF15); m=36/215; ncol2=12; w=0; offset=0; strand=D; shift=6; score=0.639191; ------vccmCgCCCmcc--- ; cor=; Ncor= a 0 0 0 0 0 0 29.0396 21.2916 15.9457 54.3609 0 19.6352 0.665188 3.79702 1.63279 36.4374 11.0315 17.5305 0 0 0 c 0 0 0 0 0 0 25.3811 52.9566 65.996 34.7006 96.8981 23.1277 96.9697 93.1157 87.4375 48.7021 64.9423 48.3232 0 0 0 g 0 0 0 0 0 0 34.4893 12.1695 5.5332 3.43899 0 50.9119 0.406504 2.37757 2.53249 4.34783 7.1985 12.5381 0 0 0 t 0 0 0 0 0 0 11.0899 13.5822 12.5252 7.49948 3.10192 6.32518 1.95861 0.709723 8.3972 10.5127 16.8277 21.6082 0 0 0

M04510_2.00_shift6 (ZNF281)
; oligos_7nt_mkv5_m1 versus M04510_2.00 (ZNF281); m=37/215; ncol2=12; w=0; offset=0; strand=D; shift=6; score=0.639055; ------rCCCmTCCCCCr--- ; cor=; Ncor= a 0 0 0 0 0 0 26.988 15.4793 12.0417 1.77179 33.1018 15.3637 4.31528 5.19077 15.1746 16.4008 6.88917 27.1103 0 0 0 c 0 0 0 0 0 0 6.55738 70.9328 80.4375 96.1729 59.0519 0.0777907 89.432 89.8181 71.7682 69.4927 86.564 11.3775 0 0 0 g 0 0 0 0 0 0 58.4781 7.34484 3.875 1.25207 4.72007 6.06768 3.941 3.54925 7.16939 6.30937 2.48181 49.3761 0 0 0 t 0 0 0 0 0 0 7.97651 6.24311 3.64583 0.803213 3.12628 78.4909 2.31176 1.44188 5.88782 7.7971 4.06504 12.136 0 0 0

M04440_2.00_shift8 (EGR2)
; oligos_7nt_mkv5_m1 versus M04440_2.00 (EGR2); m=38/215; ncol2=13; w=0; offset=2; strand=D; shift=8; score=0.636325; --------hmCGCCCACrCrm ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.0908 42.3604 0.683956 12.222 0.346821 0.318011 0.110865 98.7931 0.0290782 27.4909 0.983757 56.8829 27.4287 c 0 0 0 0 0 0 0 0 30.7155 51.7798 97.9766 0.342215 99.3642 99.3929 95.2882 1.2069 99.9709 0.138145 78.6548 7.85903 35.8639 g 0 0 0 0 0 0 0 0 14.6015 1.80723 0.427472 84.0381 0.0289017 0 0.332594 0 0 59.368 6.17708 29.7981 12.9727 t 0 0 0 0 0 0 0 0 28.5922 4.05257 0.911941 3.3977 0.260116 0.289101 4.26829 0 0 13.0029 14.1844 5.45996 23.7347

M03706_2.00_shift6 (M03706_2.00)
; oligos_7nt_mkv5_m1 versus M03706_2.00; m=39/215; ncol2=13; w=0; offset=0; strand=D; shift=6; score=0.635066; ------GmCACGCCCmCyy-- ; cor=; Ncor= a 0 0 0 0 0 0 23.3211 37.4477 0.930714 69.7044 4.95466 22.5231 0.383944 1.1708 0.880339 28.9079 2.44621 18.8759 22.0495 0 0 c 0 0 0 0 0 0 4.34676 56.3408 97.5526 8.34975 91.6451 0.479945 98.7784 97.4518 92.2726 65.3429 83.407 37.5044 32.1555 0 0 g 0 0 0 0 0 0 69.1087 1.99084 0.620476 21.5025 2.16969 74.4943 0.383944 0.65427 0.945549 0.577234 0.825228 8.16543 11.6254 0 0 t 0 0 0 0 0 0 3.22344 4.22059 0.896243 0.44335 1.23057 2.50257 0.453752 0.72314 5.90153 5.17202 13.3215 35.4542 34.1696 0 0

M04514_2.00_shift6 (KLF15)
; oligos_7nt_mkv5_m1 versus M04514_2.00 (KLF15); m=40/215; ncol2=12; w=0; offset=0; strand=D; shift=6; score=0.634944; ------GCCMCGCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 0 22.0614 15.9576 2.97039 68.0475 0 8.01932 0 0 0 34.3078 3.20988 21.9548 0 0 0 c 0 0 0 0 0 0 0 81.541 87.8529 31.9525 100 0 100 100 93.6858 61.6939 75.7059 34.0573 0 0 0 g 0 0 0 0 0 0 75.7569 0 2.87204 0 0 86.2995 0 0 0 0 0.901771 12.7407 0 0 0 t 0 0 0 0 0 0 2.18166 2.50137 6.30471 0 0 5.68116 0 0 6.31424 3.99828 20.1825 31.2472 0 0 0

M04645_2.00_shift6 (SP6,SP9)
; oligos_7nt_mkv5_m1 versus M04645_2.00 (SP6,SP9); m=41/215; ncol2=12; w=0; offset=0; strand=D; shift=6; score=0.626835; ------rcCmCGCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 0 34.0131 14.7242 10.1294 65.7105 0.0806777 6.95222 0.8846 0 1.33288 41.9423 6.64311 17.1359 0 0 0 c 0 0 0 0 0 0 17.9445 63.7617 77.343 30.2145 98.8705 6.58979 98.5525 98.7908 83.7662 44.2998 65.8304 47.6132 0 0 0 g 0 0 0 0 0 0 38.8254 8.0385 3.56579 1.50134 0.68576 80.7578 0 0 0.820232 1.33709 6.74912 8.32313 0 0 0 t 0 0 0 0 0 0 9.21697 13.4755 8.96182 2.57373 0.36305 5.70016 0.562927 1.20919 14.0807 12.4208 20.7774 26.9278 0 0 0

M04470_2.00_shift6 (ZNF740)
; oligos_7nt_mkv5_m1 versus M04470_2.00 (ZNF740); m=42/215; ncol2=13; w=0; offset=0; strand=D; shift=6; score=0.626512; ------cygCCCCCCCCaC-- ; cor=; Ncor= a 0 0 0 0 0 0 15.541 8.9477 24.4419 2.9212 3.81944 0.361011 0.433839 0.433526 0.21692 0 4.37731 67.2363 7.04148 0 0 c 0 0 0 0 0 0 48.2934 47.385 14.4533 93.5462 95.625 99.4224 99.5662 99.4942 99.5662 100 84.8952 14.2578 75.1638 0 0 g 0 0 0 0 0 0 16.7756 4.34783 52.0999 1.97011 0 0 0 0.0722543 0 0 9.98767 11.2793 1.74672 0 0 t 0 0 0 0 0 0 19.39 39.3195 9.00492 1.5625 0.555556 0.216606 0 0 0.21692 0 0.739827 7.22656 16.048 0 0

M09515_2.00_shift8 (M09515_2.00)
; oligos_7nt_mkv5_m1 versus M09515_2.00; m=43/215; ncol2=12; w=0; offset=2; strand=D; shift=8; score=0.626496; --------cmCrCCCACrca- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.4 32.9 1.4 25.3 0.1 0.1 0.1 86.1 0.1 25.5 2.6 32.2 0 c 0 0 0 0 0 0 0 0 35.7 51.3 95.3 0.1 99.7 99.7 94.3 13.7 99.7 3.5 67.8 23.1 0 g 0 0 0 0 0 0 0 0 19.2 6.6 0.1 58.7 0.1 0.1 0.1 0.1 0.1 55.2 18.2 23.1 0 t 0 0 0 0 0 0 0 0 24.8 9.2 3.2 15.9 0.1 0.1 5.5 0.1 0.1 15.8 11.4 21.6 0

M04517_2.00_shift6 (SP6,SP8)
; oligos_7nt_mkv5_m1 versus M04517_2.00 (SP6,SP8); m=44/215; ncol2=12; w=0; offset=0; strand=D; shift=6; score=0.626047; ------rcCMCGCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 0 34.3794 20.4684 8.29254 69.9729 0.139373 7.67123 0.209278 0.209497 0.0941029 44.6849 7.16262 22.426 0 0 0 c 0 0 0 0 0 0 15.2327 57.7597 81.6585 27.8559 98.8153 2.86149 98.9187 99.0223 88.9586 44.2458 66.7384 38.3639 0 0 0 g 0 0 0 0 0 0 37.4824 9.47047 0.950187 0.542808 0.278746 86.3318 0 0.628492 1.12923 0.627156 5.68706 9.69676 0 0 0 t 0 0 0 0 0 0 12.9055 12.3014 9.09876 1.62842 0.766551 3.13546 0.871992 0.139665 9.81807 10.4421 20.4119 29.5134 0 0 0

M02888_2.00_shift6 (KLF16)
; oligos_7nt_mkv5_m1 versus M02888_2.00 (KLF16); m=45/215; ncol2=11; w=0; offset=0; strand=D; shift=6; score=0.625775; ------gmCMCgCCCMC---- ; cor=; Ncor= a 0 0 0 0 0 0 21.8146 33.2964 3.5942 69.9939 3.85064 18.5102 0.493827 0.123305 0.925926 26.152 1.57094 0 0 0 0 c 0 0 0 0 0 0 17.5237 59.5713 93.4493 28.0584 94.049 6.4432 99.5062 99.3835 93.287 70.3172 79.136 0 0 0 0 g 0 0 0 0 0 0 52.8005 2.84553 0.347826 1.94766 0.991832 60.0372 0 0.493218 0.173611 1.13704 1.12911 0 0 0 0 t 0 0 0 0 0 0 7.86112 4.28677 2.6087 0 1.10852 15.0093 0 0 5.61343 2.39378 18.164 0 0 0 0

M04513_2.00_shift6 (KLF15)
; oligos_7nt_mkv5_m1 versus M04513_2.00 (KLF15); m=46/215; ncol2=12; w=0; offset=0; strand=D; shift=6; score=0.62257; ------rcCmCrCCCmcc--- ; cor=; Ncor= a 0 0 0 0 0 0 28.524 19.4706 14.8438 61.7341 3.34436 26.8483 3.79323 5.3418 6.84564 33.1376 11.742 21.0788 0 0 0 c 0 0 0 0 0 0 15.5473 63.1813 75.3437 31.1753 88.6071 11.12 89.6616 90.0635 80.906 55.3028 67.6831 45.1452 0 0 0 g 0 0 0 0 0 0 49.5025 6.36792 2.3125 3.19846 1.94781 48.307 1.3016 2.24131 4.83221 2.89908 3.75044 9.50207 0 0 0 t 0 0 0 0 0 0 6.4262 10.9801 7.5 3.8921 6.1007 13.7247 5.24358 2.35338 7.41611 8.66055 16.8244 24.2739 0 0 0

M06118_2.00_shift5 (SP6)
; oligos_7nt_mkv5_m1 versus M06118_2.00 (SP6); m=47/215; ncol2=14; w=-1; offset=-1; strand=D; shift=5; score=0.619565; -----ggycmCGCCCmcyy-- ; cor=; Ncor= a 0 0 0 0 0 18.1996 12.1429 16.1458 15.9722 51.0417 2.60417 6.77083 1.21528 1.73611 1.5625 47.0486 10.2431 13.1944 13.0742 0 0 c 0 0 0 0 0 17.4168 5.35714 45.1389 58.8542 48.7847 96.875 0 98.7847 97.7431 85.7639 41.1458 61.8056 31.25 30.9187 0 0 g 0 0 0 0 0 45.4012 65.8929 11.4583 2.77778 0.173611 0 88.5417 0 0 0 0.347222 5.72917 12.8472 24.735 0 0 t 0 0 0 0 0 18.9824 16.6071 27.2569 22.3958 0 0.520833 4.6875 0 0.520833 12.6736 11.4583 22.2222 42.7083 31.2721 0 0

M08358_2.00_shift8 (ZNF467)
; oligos_7nt_mkv5_m1 versus M08358_2.00 (ZNF467); m=48/215; ncol2=12; w=0; offset=2; strand=D; shift=8; score=0.618528; --------CCCTCCCCCyCC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1.11257 0.850785 0.065445 0.065445 0.065445 1.37435 0.065445 0.065445 1.37435 18.6518 2.94503 0.065445 0 c 0 0 0 0 0 0 0 0 74.411 87.7618 99.8037 0.065445 85.6675 93.5209 89.3325 84.3586 73.6257 34.8822 79.6466 92.7356 0 g 0 0 0 0 0 0 0 0 4.25393 0.065445 0.065445 0.850785 3.46859 0.065445 1.11257 0.065445 1.63613 10.2749 5.03927 0.065445 0 t 0 0 0 0 0 0 0 0 20.2225 11.322 0.065445 99.0183 10.7984 5.03927 9.48953 15.5105 23.3639 36.1911 12.3691 7.13351 0

M02889_2.00_shift7 (EGR4)
; oligos_7nt_mkv5_m1 versus M02889_2.00 (EGR4); m=49/215; ncol2=16; w=0; offset=1; strand=D; shift=7; score=0.616621; -------yymCGCCCACGCAh ; cor=; Ncor= a 0 0 0 0 0 0 0 20.9027 20.9149 55.1426 2.00556 6.32465 0.238663 2.52578 0 71.8162 0.915713 2.54896 0.20982 68.1758 32.4289 c 0 0 0 0 0 0 0 26.1329 30.4483 38.6501 88.6815 5.40325 96.4851 93.6224 94.8105 16.8369 91.6129 19.6149 91.3554 12.4131 26.3614 g 0 0 0 0 0 0 0 17.9832 9.64318 3.03335 2.97855 80.2298 1.36689 2.25216 2.36865 5.55378 2.37253 75.0684 3.8397 12.2651 7.7068 t 0 0 0 0 0 0 0 34.9812 38.9936 3.17397 6.33439 8.04232 1.90931 1.59966 2.82084 5.79317 5.09886 2.76775 4.59505 7.14603 33.5029

M08876_2.00_shift2 (KLF3)
; oligos_7nt_mkv5_m1 versus M08876_2.00 (KLF3); m=50/215; ncol2=19; w=-4; offset=-4; strand=D; shift=2; score=0.615767; --cccrgCCCCrCCChycycc ; cor=; Ncor= a 0 0 13.8554 13.4538 16.8675 27.3092 14.8594 7.02811 4.21687 24.498 0.401606 27.1084 0.200803 0.200803 0 25.1004 11.0442 7.22892 11.245 8.83534 12.6506 c 0 0 48.1928 53.012 49.5984 16.2651 14.8594 84.3373 75.502 72.49 98.1928 0 98.5944 99.1968 96.5863 35.9438 31.5261 49.5984 42.3695 46.1847 47.1888 g 0 0 21.8876 24.2972 20.4819 38.1526 61.8474 1.00402 1.80723 2.61044 0.60241 64.257 0.803213 0 0 4.41767 24.6988 18.6747 20.4819 22.2892 18.8755 t 0 0 16.0643 9.23695 13.0522 18.2731 8.43373 7.63052 18.4739 0.401606 0.803213 8.63454 0.401606 0.60241 3.41365 34.5382 32.7309 24.498 25.9036 22.6908 21.2851

M08982_2.00_shift2 (M08982_2.00)
; oligos_7nt_mkv5_m1 versus M08982_2.00; m=51/215; ncol2=19; w=-4; offset=-4; strand=D; shift=2; score=0.615767; --cccrgCCCCrCCChycycc ; cor=; Ncor= a 0 0 13.8554 13.4538 16.8675 27.3092 14.8594 7.02811 4.21687 24.498 0.401606 27.1084 0.200803 0.200803 0 25.1004 11.0442 7.22892 11.245 8.83534 12.6506 c 0 0 48.1928 53.012 49.5984 16.2651 14.8594 84.3373 75.502 72.49 98.1928 0 98.5944 99.1968 96.5863 35.9438 31.5261 49.5984 42.3695 46.1847 47.1888 g 0 0 21.8876 24.2972 20.4819 38.1526 61.8474 1.00402 1.80723 2.61044 0.60241 64.257 0.803213 0 0 4.41767 24.6988 18.6747 20.4819 22.2892 18.8755 t 0 0 16.0643 9.23695 13.0522 18.2731 8.43373 7.63052 18.4739 0.401606 0.803213 8.63454 0.401606 0.60241 3.41365 34.5382 32.7309 24.498 25.9036 22.6908 21.2851

M04469_2.00_shift6 (ZNF740)
; oligos_7nt_mkv5_m1 versus M04469_2.00 (ZNF740); m=52/215; ncol2=13; w=0; offset=0; strand=D; shift=6; score=0.614894; ------cyrCCCCCCCCAc-- ; cor=; Ncor= a 0 0 0 0 0 0 17.6303 12.5679 29.8318 4.99584 9.32203 1.64684 2.00182 2.10623 0.927644 0.188147 9.74576 70.5214 13.2522 0 0 c 0 0 0 0 0 0 47.5829 52.5213 14.0747 87.8435 89.4068 96.5233 95.9964 96.6117 97.8664 99.2474 89.4068 15.9759 67.5416 0 0 g 0 0 0 0 0 0 17.2512 5.58573 43.2909 3.08077 1.18644 0.365965 0.636943 0.274725 0.649351 0.28222 0.508475 4.54545 3.45711 0 0 t 0 0 0 0 0 0 17.5355 29.3251 12.8026 4.07993 0.0847458 1.46386 1.36488 1.00733 0.556586 0.28222 0.338983 8.95722 15.749 0 0

M07937_2.00_shift7 (ZBTB7A)
; oligos_7nt_mkv5_m1 versus M07937_2.00 (ZBTB7A); m=53/215; ncol2=15; w=0; offset=1; strand=D; shift=7; score=0.61345; -------cssmGmCCCyyscc ; cor=; Ncor= a 0 0 0 0 0 0 0 5.2 19.2 17.4 41 2 56.6 0 0.4 5 0 13 14.2 8.2 6.4 c 0 0 0 0 0 0 0 61.6 37 27.4 33.6 0 43.4 98.8 99.2 92.4 65.8 37 36.4 57.8 55.8 g 0 0 0 0 0 0 0 23.8 26.4 49.8 21.2 96 0 0 0 0 0.4 13 36.6 20.2 23 t 0 0 0 0 0 0 0 9.4 17.4 5.4 4.2 2 0 1.2 0.4 2.6 33.8 37 12.8 13.8 14.8

M08911_2.00_shift0 (SP2)
; oligos_7nt_mkv5_m1 versus M08911_2.00 (SP2); m=54/215; ncol2=22; w=-6; offset=-6; strand=D; shift=0; score=0.612129; scsccggcCCCGCCyCcyssc ; cor=; Ncor= a 5.59912 7.4692 9.40045 10.683 21.5907 20.8381 7.28292 1.99321 2.77539 3.27319 5.0971 5.40346 1.00615 3.93614 1.86169 9.81341 6.78515 10.5576 10.6237 6.24231 5.09449 c 49.492 58.9305 46.6039 52.6531 39.2593 23.3438 21.865 58.1706 78.6049 93.459 90.0299 1.28031 95.6927 91.8605 63.0486 70.6115 65.6845 38.4353 42.0573 50.4652 52.2944 g 32.6366 18.5491 25.794 23.6977 19.0192 50.8124 60.4696 17.7575 8.68857 2.01296 1.63721 88.9741 2.0841 0.424065 5.48717 5.57475 10.0101 22.2099 31.8687 28.2179 24.6121 t 12.2723 15.0512 18.2017 12.9662 20.1308 5.00571 10.3825 22.0787 9.93112 1.25486 3.23577 4.34209 1.21706 3.77932 29.6025 14.0003 17.5203 28.7972 15.4503 15.0745 17.999

M08970_2.00_shift0 (M08970_2.00)
; oligos_7nt_mkv5_m1 versus M08970_2.00; m=55/215; ncol2=22; w=-6; offset=-6; strand=D; shift=0; score=0.612129; scsccggcCCCGCCyCcyssc ; cor=; Ncor= a 5.59912 7.4692 9.40045 10.683 21.5907 20.8381 7.28292 1.99321 2.77539 3.27319 5.0971 5.40346 1.00615 3.93614 1.86169 9.81341 6.78515 10.5576 10.6237 6.24231 5.09449 c 49.492 58.9305 46.6039 52.6531 39.2593 23.3438 21.865 58.1706 78.6049 93.459 90.0299 1.28031 95.6927 91.8605 63.0486 70.6115 65.6845 38.4353 42.0573 50.4652 52.2944 g 32.6366 18.5491 25.794 23.6977 19.0192 50.8124 60.4696 17.7575 8.68857 2.01296 1.63721 88.9741 2.0841 0.424065 5.48717 5.57475 10.0101 22.2099 31.8687 28.2179 24.6121 t 12.2723 15.0512 18.2017 12.9662 20.1308 5.00571 10.3825 22.0787 9.93112 1.25486 3.23577 4.34209 1.21706 3.77932 29.6025 14.0003 17.5203 28.7972 15.4503 15.0745 17.999

M08879_2.00_shift6 (KLF12)
; oligos_7nt_mkv5_m1 versus M08879_2.00 (KLF12); m=56/215; ncol2=11; w=0; offset=0; strand=D; shift=6; score=0.610461; ------GCCCCGCCCck---- ; cor=; Ncor= a 0 0 0 0 0 0 3.9823 1.54867 3.9823 19.469 1.54867 2.87611 0 0.221239 0.442478 13.9381 8.40708 0 0 0 0 c 0 0 0 0 0 0 2.87611 96.4602 86.2832 79.2035 96.0177 0.221239 100 99.5575 93.1416 58.1858 19.469 0 0 0 0 g 0 0 0 0 0 0 80.0885 0.663717 0 0.884956 0.221239 87.8319 0 0.221239 0 3.09735 34.292 0 0 0 0 t 0 0 0 0 0 0 13.0531 1.32743 9.73451 0.442478 2.21239 9.0708 0 0 6.41593 24.7788 37.8319 0 0 0 0

M09037_2.00_rc_shift4 (M09037_2.00_rc)
; oligos_7nt_mkv5_m1 versus M09037_2.00_rc; m=57/215; ncol2=14; w=-2; offset=-2; strand=R; shift=4; score=0.60896; ----wkkyCCCGCCcccy--- ; cor=; Ncor= a 0 0 0 0 32.8 24.2 10.4 4.8 1.8 4 3.2 7 1 0.2 15.6 17.6 6.2 15.4 0 0 0 c 0 0 0 0 19.6 17.6 10.6 32.6 90.4 91 95.8 0.6 97 90 53 55.2 60.4 27.4 0 0 0 g 0 0 0 0 19.6 28 39.4 4.8 1 4.8 0.2 89.8 0.8 7.4 6.6 6.8 10 19 0 0 0 t 0 0 0 0 28 30.2 39.6 57.8 6.8 0.2 0.8 2.6 1.2 2.4 24.8 20.4 23.4 38.2 0 0 0

M08321_2.00_shift5 (ZNF281)
; oligos_7nt_mkv5_m1 versus M08321_2.00 (ZNF281); m=58/215; ncol2=12; w=-1; offset=-1; strand=D; shift=5; score=0.606545; -----ybCCCCTCCCCC---- ; cor=; Ncor= a 0 0 0 0 0 9.89583 12.5744 0.967262 1.86012 0.0744048 10.4911 9.59821 0.0744048 0.0744048 0.0744048 0.0744048 0.0744048 0 0 0 0 c 0 0 0 0 0 39.3601 27.753 92.3363 96.2054 99.7768 77.1577 0.0744048 99.7768 99.7768 96.2054 99.7768 99.7768 0 0 0 0 g 0 0 0 0 0 24.4792 27.1577 2.75298 0.0744048 0.0744048 0.0744048 17.0387 0.0744048 0.0744048 0.0744048 0.0744048 0.0744048 0 0 0 0 t 0 0 0 0 0 26.2649 32.5149 3.94345 1.86012 0.0744048 12.2768 73.2887 0.0744048 0.0744048 3.64583 0.0744048 0.0744048 0 0 0 0

M07929_2.00_shift0 (EGR1)
; oligos_7nt_mkv5_m1 versus M07929_2.00 (EGR1); m=59/215; ncol2=20; w=-6; offset=-6; strand=D; shift=0; score=0.606543; ccsccssccCCGCCCmCGCm- ; cor=; Ncor= a 13.9394 15.1515 12.7273 16.9697 17.1717 18.1818 10.101 16.9697 13.5354 18.3838 0.404 19.798 0 0 0 51.5151 0 7.0707 0 40.6061 0 c 46.2626 45.6566 46.0606 44.2424 48.2828 35.5556 48.8889 44.4444 40 73.9394 97.9798 0 100 99.798 95.1515 47.6768 99.798 0.6061 90.3031 29.2929 0 g 24.4444 22.6263 25.6566 23.0303 17.7778 29.4949 25.0505 18.7879 21.6162 0.8081 0 69.6969 0 0.202 0 0.808099 0.202 80.202 4.2424 17.1717 0 t 15.3535 16.5657 15.5556 15.7576 16.7677 16.7677 15.9596 19.798 24.8485 6.8687 1.6162 10.5051 0 0 4.8485 0 0 12.1212 5.45451 12.9293 0

M08884_2.00_shift7 (EGR2)
; oligos_7nt_mkv5_m1 versus M08884_2.00 (EGR2); m=60/215; ncol2=18; w=0; offset=1; strand=D; shift=7; score=0.605733; -------yyCCdCCCmCwCmy ; cor=; Ncor= a 0 0 0 0 0 0 0 13.6 8.2 10.8 6.2 34.6 2 6 1.8 48.6 1.4 39.6 5.6 29.6 7 c 0 0 0 0 0 0 0 56.2 50.2 78.2 87.4 2.2 91.6 89 79.4 46.2 93 4.4 76.6 45 50.6 g 0 0 0 0 0 0 0 4.8 7.4 3.4 0.6 28.2 4 1.4 0.6 1.2 2.2 19 10.2 10.4 10.4 t 0 0 0 0 0 0 0 25.4 34.2 7.6 5.8 35 2.4 3.6 18.2 4 3.4 37 7.6 15 32

M02932_2.00_shift7 (M02932_2.00)
; oligos_7nt_mkv5_m1 versus M02932_2.00; m=61/215; ncol2=16; w=0; offset=1; strand=D; shift=7; score=0.605125; -------mhmCGCCCmCkCAm ; cor=; Ncor= a 0 0 0 0 0 0 0 32.3142 32.2785 61.8182 0 7.54445 0 0.157812 0 51.7114 0.314961 0.422833 0.157978 89.1816 44.2511 c 0 0 0 0 0 0 0 32.4196 30.9072 36.6753 99.6845 0.432484 99.9473 99.737 100 48.1306 99.5276 16.7321 99.842 5.73848 32.2785 g 0 0 0 0 0 0 0 11.3337 3.69198 0.363636 0.0525762 91.11 0.0527148 0.105208 0 0.157978 0 25.5814 0 3.62183 4.95781 t 0 0 0 0 0 0 0 23.9325 33.1224 1.14286 0.262881 0.913023 0 0 0 0 0.15748 57.2637 0 1.45814 18.5127

M08857_2.00_shift6 (KLF6)
; oligos_7nt_mkv5_m1 versus M08857_2.00 (KLF6); m=62/215; ncol2=19; w=0; offset=0; strand=D; shift=6; score=0.602234; ------yyccmdgCCMCdCCC ; cor=; Ncor= a 0 0 0 0 0 0 5.24194 10.6855 6.45161 11.6935 25.8065 25 10.8871 4.6371 4.23387 26.0081 2.21774 28.2258 1.20968 2.01613 13.1048 c 0 0 0 0 0 0 45.5645 43.3468 60.2823 60.8871 52.2177 13.7097 20.7661 83.6694 68.3468 68.9516 85.4839 0 89.1129 95.5645 81.4516 g 0 0 0 0 0 0 23.3871 11.0887 17.1371 12.7016 15.7258 31.8548 45.3629 3.02419 6.45161 2.21774 0.604839 45.7661 5.24194 0 0.604839 t 0 0 0 0 0 0 25.8065 34.879 16.129 14.7177 6.25 29.4355 22.9839 8.66935 20.9677 2.82258 11.6935 26.0081 4.43548 2.41935 4.83871

M08962_2.00_shift6 (M08962_2.00)
; oligos_7nt_mkv5_m1 versus M08962_2.00; m=63/215; ncol2=19; w=0; offset=0; strand=D; shift=6; score=0.602234; ------yyccmdgCCMCdCCC ; cor=; Ncor= a 0 0 0 0 0 0 5.24194 10.6855 6.45161 11.6935 25.8065 25 10.8871 4.6371 4.23387 26.0081 2.21774 28.2258 1.20968 2.01613 13.1048 c 0 0 0 0 0 0 45.5645 43.3468 60.2823 60.8871 52.2177 13.7097 20.7661 83.6694 68.3468 68.9516 85.4839 0 89.1129 95.5645 81.4516 g 0 0 0 0 0 0 23.3871 11.0887 17.1371 12.7016 15.7258 31.8548 45.3629 3.02419 6.45161 2.21774 0.604839 45.7661 5.24194 0 0.604839 t 0 0 0 0 0 0 25.8065 34.879 16.129 14.7177 6.25 29.4355 22.9839 8.66935 20.9677 2.82258 11.6935 26.0081 4.43548 2.41935 4.83871

M04509_2.00_shift6 (ZNF281)
; oligos_7nt_mkv5_m1 versus M04509_2.00 (ZNF281); m=64/215; ncol2=12; w=0; offset=0; strand=D; shift=6; score=0.601721; ------gCCCCTCCCCCa--- ; cor=; Ncor= a 0 0 0 0 0 0 11.2647 2.15385 4.33229 0.138504 6.92892 2.06233 0 1.67286 3.41696 3.75881 5.06993 67.5349 0 0 0 c 0 0 0 0 0 0 14.7892 92.2198 93.9705 98.2918 91.0148 0 99.8126 98.3271 91.263 81.9107 92.5699 23.0233 0 0 0 g 0 0 0 0 0 0 61.2647 0.835165 1.25056 0 0.49173 0 0.0937207 0 1.25433 5.91229 0 1.67442 0 0 0 t 0 0 0 0 0 0 12.6814 4.79121 0.446628 1.56971 1.5646 97.9377 0.0937207 0 4.06574 8.41817 2.36014 7.76744 0 0 0

M10216_2.00_shift9 (EGR4)
; oligos_7nt_mkv5_m1 versus M10216_2.00 (EGR4); m=65/215; ncol2=12; w=0; offset=3; strand=D; shift=9; score=0.600984; ---------MCrCCCACGCAw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 28 0 34 0 0 0 90.7 0 0 0 73.8739 36.8368 c 0 0 0 0 0 0 0 0 0 70 100 0 100 100 75.9 9.3 100 0 98.1 7.10711 10.5105 g 0 0 0 0 0 0 0 0 0 0 0 56.6 0 0 0 0 0 94.3 0 9.50951 0 t 0 0 0 0 0 0 0 0 0 2 0 9.4 0 0 24.1 0 0 5.7 1.9 9.50951 52.6527

M08878_2.00_shift4 (ZBTB17)
; oligos_7nt_mkv5_m1 versus M08878_2.00 (ZBTB17); m=66/215; ncol2=19; w=-2; offset=-2; strand=D; shift=4; score=0.599592; ----yykYCCcTCCCCCwccy ; cor=; Ncor= a 0 0 0 0 12 18.6 6 2.6 2 4.6 23.2 10.2 0.4 5.2 4.4 9 0.8 45.8 9.2 9.8 12.6 c 0 0 0 0 50.8 33.2 13.6 71 72.6 88.6 53.8 0.2 85 79 68.4 68 81.2 9.4 57.2 61 54 g 0 0 0 0 11.4 6.2 27.6 0.8 2.2 1.6 3.2 20 7.4 0.6 3.4 2.6 4 12.8 13.6 8 5.4 t 0 0 0 0 25.8 42 52.8 25.6 23.2 5.2 19.8 69.6 7.2 15.2 23.8 20.4 14 32 20 21.2 28

M08937_2.00_shift1 (WT1)
; oligos_7nt_mkv5_m1 versus M08937_2.00 (WT1); m=67/215; ncol2=20; w=-5; offset=-5; strand=D; shift=1; score=0.599136; -CycCycCyCCTCCYyCbCcy ; cor=; Ncor= a 0 2.6 5 3.8 6 9.2 5.6 1.2 3.8 4.4 1 2.2 0 1.2 0.8 6.2 1.4 14.6 3.8 7 7.2 c 0 68 47.2 67.4 75.2 38.8 51.6 71.4 38.6 90.8 97 0.4 97.2 95.6 71.4 59.6 80.4 27.6 76.2 56 51.4 g 0 8 10.8 9.4 6.8 21.4 18.6 3.6 10 1.2 0.8 14.8 1.6 2.6 2.6 5.2 8.4 30.4 11.2 16 10.2 t 0 21.4 37 19.4 12 30.6 24.2 23.8 47.6 3.6 1.2 82.6 1.2 0.6 25.2 29 9.8 27.4 8.8 21 31.2

M08968_2.00_shift1 (M08968_2.00)
; oligos_7nt_mkv5_m1 versus M08968_2.00; m=68/215; ncol2=20; w=-5; offset=-5; strand=D; shift=1; score=0.599136; -CycCycCyCCTCCYyCbCcy ; cor=; Ncor= a 0 2.6 5 3.8 6 9.2 5.6 1.2 3.8 4.4 1 2.2 0 1.2 0.8 6.2 1.4 14.6 3.8 7 7.2 c 0 68 47.2 67.4 75.2 38.8 51.6 71.4 38.6 90.8 97 0.4 97.2 95.6 71.4 59.6 80.4 27.6 76.2 56 51.4 g 0 8 10.8 9.4 6.8 21.4 18.6 3.6 10 1.2 0.8 14.8 1.6 2.6 2.6 5.2 8.4 30.4 11.2 16 10.2 t 0 21.4 37 19.4 12 30.6 24.2 23.8 47.6 3.6 1.2 82.6 1.2 0.6 25.2 29 9.8 27.4 8.8 21 31.2

M02921_2.00_shift6 (SP1)
; oligos_7nt_mkv5_m1 versus M02921_2.00 (SP1); m=69/215; ncol2=11; w=0; offset=0; strand=D; shift=6; score=0.598391; ------rCCmCrCCCmc---- ; cor=; Ncor= a 0 0 0 0 0 0 46.3014 19.2941 6.62971 47.0964 0.606612 30.0733 0 0.183038 0.127065 38.9714 17.6778 0 0 0 0 c 0 0 0 0 0 0 2.23634 70.7016 75.4216 47.7062 99.0294 0.867355 99.6642 99.6034 82.9733 47.5875 51.7187 0 0 0 0 g 0 0 0 0 0 0 43.205 3.37809 1.8711 4.96516 0.181984 48.8261 0.030525 0.0610128 0 1.56416 10.4546 0 0 0 0 t 0 0 0 0 0 0 8.25724 6.62625 16.0776 0.232288 0.181984 20.2333 0.30525 0.152532 16.8996 11.877 20.1489 0 0 0 0

M09041_2.00_rc_shift5 (M09041_2.00_rc)
; oligos_7nt_mkv5_m1 versus M09041_2.00_rc; m=70/215; ncol2=12; w=-1; offset=-1; strand=R; shift=5; score=0.595831; -----ykyCCCGCCcyc---- ; cor=; Ncor= a 0 0 0 0 0 14 4.8 1.4 0 2 3.4 5.6 0.4 1.2 16.2 17.8 15.2 0 0 0 0 c 0 0 0 0 0 30.2 16.4 37 96.2 88.4 93.4 0.4 97.4 82.6 64.4 33.6 50.8 0 0 0 0 g 0 0 0 0 0 20.2 28.2 4.2 1.6 1.8 0.8 92.4 0.8 10.4 2.4 11.4 16.2 0 0 0 0 t 0 0 0 0 0 35.6 50.6 57.4 2.2 7.8 2.4 1.6 1.4 5.8 17 37.2 17.8 0 0 0 0

M06117_2.00_shift6 (SP6)
; oligos_7nt_mkv5_m1 versus M06117_2.00 (SP6); m=71/215; ncol2=11; w=0; offset=0; strand=D; shift=6; score=0.590845; ------gmymCGCCCmc---- ; cor=; Ncor= a 0 0 0 0 0 0 18.1818 27.2727 0 54.5455 0 4.54545 4.54545 0 0 54.5455 4.54545 0 0 0 0 c 0 0 0 0 0 0 4.54545 45.4545 59.0909 45.4545 100 0 95.4545 100 86.3636 31.8182 63.6364 0 0 0 0 g 0 0 0 0 0 0 59.0909 9.09091 0 0 0 86.3636 0 0 0 0 13.6364 0 0 0 0 t 0 0 0 0 0 0 18.1818 18.1818 40.9091 0 0 9.09091 0 0 13.6364 13.6364 18.1818 0 0 0 0

M08873_2.00_shift2 (SP4)
; oligos_7nt_mkv5_m1 versus M08873_2.00 (SP4); m=72/215; ncol2=20; w=-4; offset=-4; strand=D; shift=2; score=0.590705; --yyyggCyCCGCCycytkcy ; cor=; Ncor= a 0 0 9.41884 8.61723 23.0461 21.2425 6.21242 2.80561 5.01002 6.61323 7.21443 9.61924 2.40481 1.80361 2.20441 11.4228 7.81563 13.6273 9.61924 7.41483 12.2244 c 0 0 43.0862 49.8998 36.4729 12.4248 14.2285 74.7495 56.7134 86.1723 85.5711 1.002 93.5872 90.1804 61.523 63.7275 54.9098 22.4449 24.8497 60.521 46.2926 g 0 0 14.2285 11.2224 7.81563 41.483 59.7194 1.002 3.00601 1.80361 1.60321 76.9539 0.400802 1.2024 2.00401 1.80361 2.60521 11.2224 25.0501 18.0361 14.8297 t 0 0 33.2665 30.2605 32.6653 24.8497 19.8397 21.4429 35.2705 5.41082 5.61122 12.4248 3.60721 6.81363 34.2685 23.0461 34.6693 52.7054 40.481 14.0281 26.6533

M08975_2.00_shift2 (M08975_2.00)
; oligos_7nt_mkv5_m1 versus M08975_2.00; m=73/215; ncol2=20; w=-4; offset=-4; strand=D; shift=2; score=0.590705; --yyyggCyCCGCCycytkcy ; cor=; Ncor= a 0 0 9.41884 8.61723 23.0461 21.2425 6.21242 2.80561 5.01002 6.61323 7.21443 9.61924 2.40481 1.80361 2.20441 11.4228 7.81563 13.6273 9.61924 7.41483 12.2244 c 0 0 43.0862 49.8998 36.4729 12.4248 14.2285 74.7495 56.7134 86.1723 85.5711 1.002 93.5872 90.1804 61.523 63.7275 54.9098 22.4449 24.8497 60.521 46.2926 g 0 0 14.2285 11.2224 7.81563 41.483 59.7194 1.002 3.00601 1.80361 1.60321 76.9539 0.400802 1.2024 2.00401 1.80361 2.60521 11.2224 25.0501 18.0361 14.8297 t 0 0 33.2665 30.2605 32.6653 24.8497 19.8397 21.4429 35.2705 5.41082 5.61122 12.4248 3.60721 6.81363 34.2685 23.0461 34.6693 52.7054 40.481 14.0281 26.6533

M04518_2.00_shift6 (SP6,SP8)
; oligos_7nt_mkv5_m1 versus M04518_2.00 (SP6,SP8); m=74/215; ncol2=12; w=0; offset=0; strand=D; shift=6; score=0.589346; ------rcCACGCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 0 28.6296 24.4087 12.157 82.827 0 6.50407 0 0 0.384123 42.989 10.6603 18.6959 0 0 0 c 0 0 0 0 0 0 10.7998 49.3961 68.1834 16.2447 100 0 99.6953 99.5941 83.7815 43.2967 62.1925 41.0087 0 0 0 g 0 0 0 0 0 0 48.4972 9.1847 10.1077 0 0 88.6631 0 0.405885 0.810926 0.659341 4.57488 11.6658 0 0 0 t 0 0 0 0 0 0 12.0734 17.0106 9.55193 0.92827 0 4.83288 0.304723 0 15.0235 13.0549 22.5723 28.6296 0 0 0

M08871_2.00_shift8 (KLF1)
; oligos_7nt_mkv5_m1 versus M08871_2.00 (KLF1); m=75/215; ncol2=14; w=0; offset=2; strand=D; shift=8; score=0.589248; --------cccrGCCmCrCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10.2249 16.3599 18.6094 28.0164 8.58896 8.99796 5.31697 42.9448 0.817996 38.0368 0.204499 0.613497 0.408998 c 0 0 0 0 0 0 0 0 62.3722 52.9652 47.2393 9.40695 16.7689 86.2986 90.3885 53.5787 97.7505 0 99.7955 98.773 98.9775 g 0 0 0 0 0 0 0 0 16.1554 20.2454 19.8364 45.8078 68.5072 2.24949 0.408998 1.02249 0 52.7607 0 0.408998 0.204499 t 0 0 0 0 0 0 0 0 11.2474 10.4294 14.3149 16.7689 6.13497 2.45399 3.88548 2.45399 1.43149 9.20245 0 0.204499 0.408998

M02910_2.00_shift6 (SP3,SP6)
; oligos_7nt_mkv5_m1 versus M02910_2.00 (SP3,SP6); m=76/215; ncol2=11; w=0; offset=0; strand=D; shift=6; score=0.587918; ------sCCACrCCCmc---- ; cor=; Ncor= a 0 0 0 0 0 0 22.3999 17.6351 8.55439 71.6826 2.25957 26.1176 2.06696 2.5942 0.957055 43.3481 12.7548 0 0 0 0 c 0 0 0 0 0 0 30.0549 70.9806 83.8812 23.8364 93.3343 3.89076 96.2009 95.7826 81.092 45.3752 55.8995 0 0 0 0 g 0 0 0 0 0 0 35.5782 4.23155 3.17299 2.67418 1.2004 55.5378 0.55313 0.768116 1.5092 2.34931 9.05016 0 0 0 0 t 0 0 0 0 0 0 11.9671 7.15283 4.39142 1.80688 3.20576 14.4538 1.17904 0.855072 16.4417 8.92737 22.2955 0 0 0 0

M08987_2.00_shift3 (M08987_2.00)
; oligos_7nt_mkv5_m1 versus M08987_2.00; m=77/215; ncol2=19; w=-3; offset=-3; strand=D; shift=3; score=0.586755; ---CCycyCCcybCyCCkCCY ; cor=; Ncor= a 0 0 0 6.88935 7.51566 14.6138 5.21921 3.34029 1.25261 3.13152 13.9875 20.8768 4.38413 0.835073 5.21921 8.76827 0.626305 10.8559 0.208768 0 3.34029 c 0 0 0 73.0689 74.3215 44.6764 66.5971 57.62 77.0355 79.7495 58.2463 28.6013 29.8539 86.8476 42.38 88.5177 91.858 0 97.4948 99.7912 69.5198 g 0 0 0 1.67015 9.39457 12.9436 10.4384 13.3612 3.13152 2.08768 4.38413 16.0752 34.4468 0.626305 3.13152 1.46138 0.626305 35.4906 0.626305 0.208768 1.25261 t 0 0 0 18.3716 8.76827 27.7662 17.7453 25.6785 18.5804 15.0313 23.382 34.4468 31.3152 11.691 49.2693 1.25261 6.88935 53.6534 1.67015 0 25.8873

M08907_2.00_shift3 (KLF15)
; oligos_7nt_mkv5_m1 versus M08907_2.00 (KLF15); m=78/215; ncol2=19; w=-3; offset=-3; strand=D; shift=3; score=0.586755; ---CCycyCCcybCyCCkCCY ; cor=; Ncor= a 0 0 0 6.88935 7.51566 14.6138 5.21921 3.34029 1.25261 3.13152 13.9875 20.8768 4.38413 0.835073 5.21921 8.76827 0.626305 10.8559 0.208768 0 3.34029 c 0 0 0 73.0689 74.3215 44.6764 66.5971 57.62 77.0355 79.7495 58.2463 28.6013 29.8539 86.8476 42.38 88.5177 91.858 0 97.4948 99.7912 69.5198 g 0 0 0 1.67015 9.39457 12.9436 10.4384 13.3612 3.13152 2.08768 4.38413 16.0752 34.4468 0.626305 3.13152 1.46138 0.626305 35.4906 0.626305 0.208768 1.25261 t 0 0 0 18.3716 8.76827 27.7662 17.7453 25.6785 18.5804 15.0313 23.382 34.4468 31.3152 11.691 49.2693 1.25261 6.88935 53.6534 1.67015 0 25.8873

M09008_2.00_shift8 (M09008_2.00)
; oligos_7nt_mkv5_m1 versus M09008_2.00; m=79/215; ncol2=14; w=0; offset=2; strand=D; shift=8; score=0.586288; --------cccrgCCmCrCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 17.1806 16.0793 24.0088 28.6344 12.7753 5.06608 5.28634 47.3568 0.660793 45.1542 0.220264 0 1.10132 c 0 0 0 0 0 0 0 0 64.3172 62.1145 53.304 13.4361 15.859 91.1894 91.1894 49.3392 98.4581 0.220264 99.1189 99.1189 98.4581 g 0 0 0 0 0 0 0 0 11.2335 17.1806 12.7753 40.0881 64.5374 1.76211 0.660793 0.881057 0 43.6123 0 0.440529 0 t 0 0 0 0 0 0 0 0 7.26872 4.62555 9.91189 17.8414 6.82819 1.98238 2.86344 2.42291 0.881057 11.0132 0.660793 0.440529 0.440529

M08864_2.00_shift0 (PATZ1)
; oligos_7nt_mkv5_m1 versus M08864_2.00 (PATZ1); m=80/215; ncol2=22; w=-6; offset=-6; strand=D; shift=0; score=0.585005; cyyCccyycCmkcCCCckCCc ; cor=; Ncor= a 16.9043 4.48065 5.49898 4.07332 18.9409 17.1079 2.24033 3.05499 7.12831 6.31365 33.8086 1.62933 5.49898 1.01833 2.64766 12.0163 7.12831 11.8126 3.25866 9.16497 19.7556 c 48.8798 62.3218 31.3646 77.3931 57.6375 34.8269 49.4908 57.8411 60.6925 76.5784 55.3971 0.814664 61.5071 84.7251 69.2464 70.6721 62.3218 13.6456 84.1141 68.2281 63.9511 g 20.3666 1.42566 21.7923 5.70265 7.53564 24.0326 19.1446 6.31365 16.0896 14.2566 2.85132 55.8045 11.8126 1.62933 6.51731 3.05499 6.10998 28.7169 8.55397 8.35031 2.64766 t 13.8493 31.7719 41.3442 12.831 15.8859 24.0326 29.1242 32.7902 16.0896 2.85132 7.94297 41.7515 21.1813 12.6273 21.5886 14.2566 24.4399 45.8248 4.07332 14.2566 13.6456

M04657_2.00_shift5 (KLF14)
; oligos_7nt_mkv5_m1 versus M04657_2.00 (KLF14); m=81/215; ncol2=13; w=-1; offset=-1; strand=D; shift=5; score=0.583355; -----srcCaCGCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 24.251 42.2284 16.4532 5.29267 65.2909 2.21104 18.4092 0.217797 0.265128 0.689655 35.1905 10.5908 19.8902 0 0 0 c 0 0 0 0 0 26.5725 11.9261 63.3006 87.1854 18.7423 97.2095 2.73727 99.1755 99.423 86.2069 52.5107 61.7582 39.8745 0 0 0 g 0 0 0 0 0 28.5961 38.409 8.59895 1.31291 11.4093 0.21348 71.5167 0.0777847 0.311915 0.351589 1.89847 6.2606 13.3804 0 0 0 t 0 0 0 0 0 20.5804 7.43645 11.6473 6.20897 4.55756 0.365965 7.33677 0.528936 0 12.7519 10.4003 21.3904 26.8549 0 0 0

M04646_2.00_shift6 (SP6,SP9)
; oligos_7nt_mkv5_m1 versus M04646_2.00 (SP6,SP9); m=82/215; ncol2=12; w=0; offset=0; strand=D; shift=6; score=0.583126; ------rcCACGCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 0 33.7393 14.4853 8.6369 82.2039 0 9.06832 0 2.87278 0 47.0257 6.99482 17.1203 0 0 0 c 0 0 0 0 0 0 9.67049 64.9744 81.9624 15.4979 99.2883 0 98.5169 95.4172 84.1375 40.3882 67.8756 45.8453 0 0 0 g 0 0 0 0 0 0 50 5.49604 4.52409 0 0 86.646 0.353107 1.70999 1.62847 0.939261 2.65544 6.94842 0 0 0 t 0 0 0 0 0 0 6.59026 15.0442 4.87662 2.29817 0.711744 4.28571 1.12994 0 14.234 11.6468 22.4741 30.086 0 0 0

M10279_2.00_shift9 (EGR3)
; oligos_7nt_mkv5_m1 versus M10279_2.00 (EGR3); m=83/215; ncol2=12; w=0; offset=3; strand=D; shift=9; score=0.582411; ---------mCGCCyACGCab ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 64 0 5.69431 0 0 0 100 0 0 0 65.8342 15.1 c 0 0 0 0 0 0 0 0 0 34 100 0 100 100 67.9 0 100 0 98.1 9.79021 27.3 g 0 0 0 0 0 0 0 0 0 0 0 88.6114 0 0 0 0 0 100 0 7.29271 27.3 t 0 0 0 0 0 0 0 0 0 2 0 5.69431 0 0 32.1 0 0 0 1.9 17.0829 30.3

M08326_2.00_shift7 (SP2)
; oligos_7nt_mkv5_m1 versus M08326_2.00 (SP2); m=84/215; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.581752; -------cCCCGCCCc----- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.083612 6.77258 2.42475 0.083612 6.43813 0.083612 0.083612 0.083612 22.4916 0 0 0 0 0 c 0 0 0 0 0 0 0 63.6288 74.3311 97.408 99.7492 0.083612 99.7492 99.7492 99.7492 64.9666 0 0 0 0 0 g 0 0 0 0 0 0 0 14.7993 0.083612 0.083612 0.083612 93.3946 0.083612 0.083612 0.083612 1.08696 0 0 0 0 0 t 0 0 0 0 0 0 0 21.4883 18.8127 0.083612 0.083612 0.083612 0.083612 0.083612 0.083612 11.4548 0 0 0 0 0

M02884_2.00_shift8 (EGR1)
; oligos_7nt_mkv5_m1 versus M02884_2.00 (EGR1); m=85/215; ncol2=14; w=0; offset=2; strand=D; shift=8; score=0.580127; --------wACGCCCACGCAh ; cor=; Ncor= a 0 0 0 0 0 0 0 0 27.2298 73.7508 0.672372 1.83443 0 0 0 79.544 0 0 0 86.166 29.3902 c 0 0 0 0 0 0 0 0 23.0951 24.9209 98.7775 0 100 99.2159 97.9714 20 99.9394 0 99.2202 1.31752 27.9268 g 0 0 0 0 0 0 0 0 11.3999 0.189753 0.183374 98.1656 0 0 0 0.456026 0 99.9073 0 10.5402 6.34146 t 0 0 0 0 0 0 0 0 38.2753 1.13852 0.366748 0 0 0.784077 2.02864 0 0.0605694 0.0926784 0.779844 1.97628 36.3415

M07727_2.00_shift7 (ZNF460)
; oligos_7nt_mkv5_m1 versus M07727_2.00 (ZNF460); m=86/215; ncol2=12; w=0; offset=1; strand=D; shift=7; score=0.579686; -------cgCCrCCkCCCC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 15.7 0.1 0.1 4.1 26.5 0.1 0.1 10.5 0.1 0.1 3.7 3.7 0 0 c 0 0 0 0 0 0 0 66.9 23.3 85.3 95.7 9.7 99.7 99.7 0.1 99.7 77.7 77.3 68.1 0 0 g 0 0 0 0 0 0 0 17.3 66.1 14.5 0.1 50.1 0.1 0.1 28.5 0.1 22.1 4.5 18.9 0 0 t 0 0 0 0 0 0 0 0.1 10.5 0.1 0.1 13.7 0.1 0.1 60.9 0.1 0.1 14.5 9.3 0 0

M10188_2.00_shift9 (EGR1)
; oligos_7nt_mkv5_m1 versus M10188_2.00 (EGR1); m=87/215; ncol2=12; w=0; offset=3; strand=D; shift=9; score=0.579636; ---------mCGCCYACGCAw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 57.7 0 10.9 0 0 0 83.6837 0 1.8 0 87.2 42.3576 c 0 0 0 0 0 0 0 0 0 42.3 100 0 100 100 69.1 14.5145 98.2 0 92.7 5.1 6.09391 g 0 0 0 0 0 0 0 0 0 0 0 76.4 0 0 0 1.8018 0 98.2 0 2.6 6.09391 t 0 0 0 0 0 0 0 0 0 0 0 12.7 0 0 30.9 0 1.8 0 7.3 5.1 45.4545

M00249_2.00_shift9 (WT1)
; oligos_7nt_mkv5_m1 versus M00249_2.00 (WT1); m=88/215; ncol2=11; w=0; offset=3; strand=D; shift=9; score=0.576665; ---------mCyCCCCCrca- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.7654 9.76681 2.48942 0.022935 0.022935 0.022935 9.70563 0.022935 25.8716 15.2561 32.3995 0 c 0 0 0 0 0 0 0 0 0 29.4673 70.6996 32.473 99.9312 99.9312 99.9312 90.2485 99.9312 15.4144 54.2316 22.5335 0 g 0 0 0 0 0 0 0 0 0 19.8837 9.76681 2.48942 0.022935 0.022935 0.022935 0.022935 0.022935 53.5748 15.2561 22.5335 0 t 0 0 0 0 0 0 0 0 0 19.8837 9.76681 62.5481 0.022935 0.022935 0.022935 0.022935 0.022935 5.13927 15.2561 22.5335 0

M04537_2.00_shift5 (KLF13)
; oligos_7nt_mkv5_m1 versus M04537_2.00 (KLF13); m=89/215; ncol2=13; w=-1; offset=-1; strand=D; shift=5; score=0.576481; -----crCCACRCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 23.8837 39.5377 16.4845 4.1606 76.1744 0.202505 25.201 0.217115 0.321351 0.192691 39.3057 7.57222 19.0559 0 0 0 c 0 0 0 0 0 31.1724 11.4831 71.5224 92.0949 21.3192 99.61 0.889699 99.431 99.2527 91.3977 51.1096 70.0514 40.3629 0 0 0 g 0 0 0 0 0 24.2527 43.8909 6.20389 0.811317 1.99025 0 71.1813 0.164708 0.246618 0.144519 0.680735 3.81613 13.0402 0 0 0 t 0 0 0 0 0 20.6912 5.08826 5.78922 2.93322 0.516203 0.187505 2.72805 0.187168 0.179359 8.26509 8.90402 18.5603 27.541 0 0 0

M04658_2.00_shift5 (KLF14)
; oligos_7nt_mkv5_m1 versus M04658_2.00 (KLF14); m=90/215; ncol2=13; w=-1; offset=-1; strand=D; shift=5; score=0.576028; -----crcCaCrCCCmcc--- ; cor=; Ncor= a 0 0 0 0 0 18.6657 35.0563 17.8602 3.48319 54.8431 1.55897 35.8318 0 0.333264 0.287186 35.8439 11.1429 20.7362 0 0 0 c 0 0 0 0 0 38.9313 10.1459 62.6548 88.8259 20.6916 98.0821 0 99.6665 99.5938 80.7754 50.5193 62.5422 41.0331 0 0 0 g 0 0 0 0 0 19.7218 44.6686 8.18319 1.66264 16.1782 0 52.0917 0 0.0729015 0.0675733 2.51964 5.99601 13.7927 0 0 0 t 0 0 0 0 0 22.6812 10.1292 11.3018 6.02824 8.28698 0.358974 12.0765 0.333507 0 18.8698 11.1171 20.3189 24.4379 0 0 0

M05859_2.00_shift5 (M05859_2.00)
; oligos_7nt_mkv5_m1 versus M05859_2.00; m=91/215; ncol2=13; w=-1; offset=-1; strand=D; shift=5; score=0.573515; -----rGccmCGCCCmyw--- ; cor=; Ncor= a 0 0 0 0 0 33 17.4 21.7 14.9 52.9 0.2 5.5 0.1 0.1 0.1 43.2 12.8 29.7 0 0 0 c 0 0 0 0 0 9.2 1.9 44.6 64.8 46.8 99.3 0.3 99.6 99.6 80.6 38.7 41.1 15.7 0 0 0 g 0 0 0 0 0 35.6 71.1 14.9 2.1 0.2 0.2 87.3 0.1 0.1 0.1 0.7 13.2 18.1 0 0 0 t 0 0 0 0 0 22.2 9.5 18.8 18.2 0.1 0.3 6.9 0.1 0.1 19.2 17.4 32.9 36.5 0 0 0

M10197_2.00_shift9 (EGR2)
; oligos_7nt_mkv5_m1 versus M10197_2.00 (EGR2); m=92/215; ncol2=12; w=0; offset=3; strand=D; shift=9; score=0.572525; ---------mCGCCyACGCAh ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 49.95 1.2987 12.5 0 0 0 100 0 3.7962 0 81.4186 34.1 c 0 0 0 0 0 0 0 0 0 44.8551 97.4026 0 100 100 62.5 0 100 0 96.2038 9.29071 25 g 0 0 0 0 0 0 0 0 0 2.5974 0 82.5 0 0 0 0 0 89.9101 0 3.6963 9.1 t 0 0 0 0 0 0 0 0 0 2.5974 1.2987 5 0 0 37.5 0 0 6.29371 3.7962 5.59441 31.8

M02898_2.00_shift6 (SP6,SP8)
; oligos_7nt_mkv5_m1 versus M02898_2.00 (SP6,SP8); m=93/215; ncol2=12; w=0; offset=0; strand=D; shift=6; score=0.570262; ------rmCACgCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 0 31.1377 31.5789 12.1951 78.6982 3.88889 9.32836 2.77778 1.16279 0 51.1364 5.41667 18.6747 0 0 0 c 0 0 0 0 0 0 16.1677 66.0819 81.4634 19.5266 92.7778 13.806 92.7778 97.093 89.7849 43.75 69.5833 31.3253 0 0 0 g 0 0 0 0 0 0 46.7066 0 0 0.591716 0.555556 62.3134 3.33333 1.74419 2.15054 3.40909 8.75 0.60241 0 0 0 t 0 0 0 0 0 0 5.98802 2.33918 6.34146 1.18343 2.77778 14.5522 1.11111 0 8.06452 1.70455 16.25 49.3976 0 0 0

M08086_2.00_shift6 (KLF5)
; oligos_7nt_mkv5_m1 versus M08086_2.00 (KLF5); m=94/215; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.566041; ------gCCMCrCCCh----- ; cor=; Ncor= a 0 0 0 0 0 0 10.4989 0 0 25.5455 0 37.1097 0 0 0 28.7635 0 0 0 0 0 c 0 0 0 0 0 0 14.863 87.4293 88.2228 70.3034 100 0 100 100 96.5028 41.1065 0 0 0 0 0 g 0 0 0 0 0 0 55.6315 0 0 0 0 38.0721 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 19.0067 12.5707 11.7772 4.15105 0 24.8182 0 0 3.49717 30.13 0 0 0 0 0

M04539_2.00_shift5 (KLF13)
; oligos_7nt_mkv5_m1 versus M04539_2.00 (KLF13); m=95/215; ncol2=13; w=-1; offset=-1; strand=D; shift=5; score=0.565626; -----crCCACRCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 24.9894 44.4014 16.781 3.06778 77.518 0 26.2894 0 0.0653218 0.0643522 40.4336 10.1436 21.3777 0 0 0 c 0 0 0 0 0 30.6089 5.35247 71.8852 95.402 20.7138 99.8425 0.0713267 99.9423 99.8963 88.0542 48.9039 64.5221 37.6938 0 0 0 g 0 0 0 0 0 24.2355 46.3741 5.50241 0.245863 1.4163 0 71.3212 0 0.0384246 0.0779001 0.436396 4.42612 15.4967 0 0 0 t 0 0 0 0 0 20.1662 3.87207 5.83144 1.28436 0.35184 0.157456 2.31812 0.0576635 0 11.8036 10.2261 20.9082 25.4317 0 0 0

M04457_2.00_shift6 (KLF16)
; oligos_7nt_mkv5_m1 versus M04457_2.00 (KLF16); m=96/215; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.565578; ------rcCmCgCCCm----- ; cor=; Ncor= a 0 0 0 0 0 0 32.0237 21.6005 9.64297 56.0179 0 23.6651 2.08927 5.70598 7.5165 27.5834 0 0 0 0 0 c 0 0 0 0 0 0 22.5292 57.0911 77.8929 27.5676 97.7205 13.1345 92.8205 88.8061 78.6577 52.9773 0 0 0 0 0 g 0 0 0 0 0 0 35.8502 11.3551 4.04845 9.23888 0 56.8721 1.82336 3.18008 3.21906 3.76509 0 0 0 0 0 t 0 0 0 0 0 0 9.59689 9.95327 8.41568 7.17561 2.27954 6.32828 3.26686 2.30783 10.6068 15.6742 0 0 0 0 0

M04540_2.00_shift5 (KLF13)
; oligos_7nt_mkv5_m1 versus M04540_2.00 (KLF13); m=97/215; ncol2=13; w=-1; offset=-1; strand=D; shift=5; score=0.565114; -----crCCACrCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 20.513 34.9546 17.3045 1.51246 75.5084 0 30.9757 0.0176134 0.364275 0.154971 35.7388 6.61041 18.839 0 0 0 c 0 0 0 0 0 34.234 4.11928 76.293 95.8513 18.075 99.9119 0 99.9031 99.5743 90.1534 55.83 73.1145 43.0158 0 0 0 g 0 0 0 0 0 22.3246 57.854 2.4346 1.62653 5.56794 0 65.2592 0.00440335 0.0351108 0.107288 0.799128 2.66336 10.2878 0 0 0 t 0 0 0 0 0 22.9284 3.07208 3.96799 1.00972 0.84867 0.0880747 3.76517 0.0748569 0.0263331 9.58436 7.63208 17.6118 27.8574 0 0 0

M04538_2.00_shift5 (KLF13)
; oligos_7nt_mkv5_m1 versus M04538_2.00 (KLF13); m=98/215; ncol2=13; w=-1; offset=-1; strand=D; shift=5; score=0.563864; -----crCCACRCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 19.2843 33.2076 18.5758 1.25656 80.2155 0 28.5787 0 0.126017 0.0174972 33.8885 5.28546 18.457 0 0 0 c 0 0 0 0 0 37.2752 4.84968 74.7925 96.574 13.6604 100 0 100 99.7862 91.4439 59.5032 76.796 44.2501 0 0 0 g 0 0 0 0 0 21.3509 58.8905 2.47009 1.45613 5.61149 0 69.5658 0 0.0305495 0.139978 0.45747 1.64547 9.06969 0 0 0 t 0 0 0 0 0 22.0896 3.0522 4.16166 0.713283 0.512647 0 1.85555 0 0.0572803 8.39866 6.15082 16.2731 28.2232 0 0 0

M10294_2.00_shift6 (SP1)
; oligos_7nt_mkv5_m1 versus M10294_2.00 (SP1); m=99/215; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.563564; ------wcCmyGCCyc----- ; cor=; Ncor= a 0 0 0 0 0 0 54.5455 9.09091 18.1818 27.2727 18.1818 9.09091 0 0 9.09091 18.1818 0 0 0 0 0 c 0 0 0 0 0 0 0 63.6364 72.7273 63.6364 54.5455 18.1818 100 100 54.5455 54.5455 0 0 0 0 0 g 0 0 0 0 0 0 18.1818 18.1818 0 9.09091 0 72.7273 0 0 9.09091 9.09091 0 0 0 0 0 t 0 0 0 0 0 0 27.2727 9.09091 9.09091 0 27.2727 0 0 0 27.2727 18.1818 0 0 0 0 0

M04559_2.00_shift5 (SP3,SP6)
; oligos_7nt_mkv5_m1 versus M04559_2.00 (SP3,SP6); m=100/215; ncol2=13; w=-1; offset=-1; strand=D; shift=5; score=0.563141; -----sgCCMCGCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 18.12 23.453 11.418 5.5243 73.9408 0 14.5351 0 0 0.185874 48.8032 4.24892 21.0642 0 0 0 c 0 0 0 0 0 30.96 6.35643 77.1332 85.2344 25.9592 100 0 99.4628 100 84.4711 42.5361 75.2961 41.0082 0 0 0 g 0 0 0 0 0 26.08 60.8498 3.00879 1.15942 0.019984 0 70.9581 0.0198965 0 0 0.511602 1.74845 7.9816 0 0 0 t 0 0 0 0 0 24.84 9.34075 8.44006 8.08184 0.0799361 0 14.5067 0.51731 0 15.343 8.1491 18.7065 29.946 0 0 0

M00133_2.00_shift8 (M00133_2.00)
; oligos_7nt_mkv5_m1 versus M00133_2.00; m=101/215; ncol2=10; w=0; offset=2; strand=D; shift=8; score=0.560462; --------cmCgCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.0214 42.3407 2.97602 15.6909 0.0767376 0.0263797 0.0433909 29.6789 10.202 20.7575 0 0 0 c 0 0 0 0 0 0 0 0 45.8577 50.1866 90.9753 1.40928 98.7545 99.967 83.3039 56.2855 54.1945 29.7523 0 0 0 g 0 0 0 0 0 0 0 0 11.8882 2.87413 2.48578 66.892 0.00389772 0.00304224 0.00127157 1.35045 11.9721 14.923 0 0 0 t 0 0 0 0 0 0 0 0 21.2327 4.59858 3.56295 16.0079 1.1649 0 16.6514 12.6852 23.6315 34.5672 0 0 0

M08299_2.00_shift8 (KLF12)
; oligos_7nt_mkv5_m1 versus M08299_2.00 (KLF12); m=102/215; ncol2=15; w=0; offset=2; strand=D; shift=8; score=0.56038; --------cccgGCCmCGCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 7.6152 9.2184 19.8397 16.8337 12.2244 6.2124 4.4088 30.6613 0 14.2285 0 0 0 c 0 0 0 0 0 0 0 0 60.7214 55.3106 39.479 23.6473 5.01 87.3747 87.1743 63.3267 100 0.2004 100 100 86.7735 g 0 0 0 0 0 0 0 0 20.2405 17.2345 20.4409 49.8998 77.7555 3.8076 0.4008 5.6112 0 78.5571 0 0 0 t 0 0 0 0 0 0 0 0 11.4228 18.2365 20.2405 9.6192 5.01 2.6052 8.016 0.4008 0 7.014 0 0 13.2265

M04558_2.00_shift5 (SP3,SP6)
; oligos_7nt_mkv5_m1 versus M04558_2.00 (SP3,SP6); m=103/215; ncol2=13; w=-1; offset=-1; strand=D; shift=5; score=0.559917; -----srCCACGCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 19.2232 28.4502 8.48454 2.28343 79.5427 0.0907853 6.15079 0 0 0.0273486 47.7649 7.4691 23.0011 0 0 0 c 0 0 0 0 0 28.5844 7.03964 84.2193 94.0631 20.2604 99.7276 0 100 99.8636 90.1272 44.005 68.7265 39.5691 0 0 0 g 0 0 0 0 0 28.7513 58.9288 2.88781 0.770658 0.0302847 0 87.1825 0 0 0.0273486 0.5431 3.98979 7.95024 0 0 0 t 0 0 0 0 0 23.4411 5.58133 4.40838 2.88283 0.166566 0.181571 6.66667 0 0.136364 9.81813 7.68695 19.8146 29.4796 0 0 0

M08302_2.00_shift10 (EGR2)
; oligos_7nt_mkv5_m1 versus M08302_2.00 (EGR2); m=104/215; ncol2=9; w=0; offset=4; strand=D; shift=10; score=0.559605; ----------CgCCCmCdC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0739645 23.1509 0.0739645 0.0739645 0.0739645 37.9438 0.0739645 28.4763 0.0739645 0 0 c 0 0 0 0 0 0 0 0 0 0 99.7781 0.0739645 99.7781 99.7781 84.0976 61.9083 99.7781 0.0739645 89.1272 0 0 g 0 0 0 0 0 0 0 0 0 0 0.0739645 55.6953 0.0739645 0.0739645 0.0739645 0.0739645 0.0739645 45.932 10.7249 0 0 t 0 0 0 0 0 0 0 0 0 0 0.0739645 21.0799 0.0739645 0.0739645 15.7544 0.0739645 0.0739645 25.5178 0.0739645 0 0

M04468_2.00_shift9 (ZNF740)
; oligos_7nt_mkv5_m1 versus M04468_2.00 (ZNF740); m=105/215; ncol2=13; w=0; offset=3; strand=D; shift=9; score=0.557382; ---------cygCCCCCCCCA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 10.4898 3.7037 13.6842 3.32393 0.10327 0.892538 0.757303 2.56321 1.37761 2.66999 0 84.486 c 0 0 0 0 0 0 0 0 0 61.1477 45.0794 12.2978 85.5127 93.8726 96.9654 98.7018 92.345 96.609 97.33 76.6761 11.2627 g 0 0 0 0 0 0 0 0 0 11.0015 3.59788 58.6906 10.5989 1.13597 1.21385 0.036062 0.311742 0 0 22.4426 0.729695 t 0 0 0 0 0 0 0 0 0 17.3611 47.619 15.3273 0.56444 4.88812 0.92824 0.504868 4.78005 2.01342 0 0.881335 3.52157

M08349_2.00_shift10 (EGR3)
; oligos_7nt_mkv5_m1 versus M08349_2.00 (EGR3); m=106/215; ncol2=9; w=0; offset=4; strand=D; shift=10; score=0.557297; ----------CkCCYCCdC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0647668 21.8264 0.0647668 0.0647668 0.0647668 18.1995 0.0647668 29.5984 0.0647668 0 0 c 0 0 0 0 0 0 0 0 0 0 99.8057 0.0647668 99.8057 99.8057 73.6399 81.671 99.8057 0.0647668 75.7124 0 0 g 0 0 0 0 0 0 0 0 0 0 0.0647668 49.0285 0.0647668 0.0647668 0.0647668 0.0647668 0.0647668 40.2202 24.158 0 0 t 0 0 0 0 0 0 0 0 0 0 0.0647668 29.0803 0.0647668 0.0647668 26.2306 0.0647668 0.0647668 30.1166 0.0647668 0 0

M08296_2.00_shift3 (SP4)
; oligos_7nt_mkv5_m1 versus M08296_2.00 (SP4); m=107/215; ncol2=15; w=-3; offset=-3; strand=D; shift=3; score=0.55648; ---yhgGCyCCgCCYCcy--- ; cor=; Ncor= a 0 0 0 15.7895 32.5911 24.2915 11.5385 1.8219 5.2632 12.1457 0 12.5506 0.2024 0 0 21.8623 12.1457 15.7895 0 0 0 c 0 0 0 42.5101 26.5182 18.8259 11.1336 75.9109 56.2753 83.4008 98.583 0 99.7976 99.7976 68.6235 70.2429 63.9676 45.3441 0 0 0 g 0 0 0 12.9555 14.9798 48.583 69.8381 7.085 3.4413 2.6316 1.417 67.6113 0 0 1.0121 0 4.8583 5.8704 0 0 0 t 0 0 0 28.7449 25.9109 8.2996 7.4899 15.1822 35.0202 1.8219 0 19.8381 0 0.2024 30.3644 7.8947 19.0283 32.996 0 0 0

M00778_2.00_shift10 (M00778_2.00)
; oligos_7nt_mkv5_m1 versus M00778_2.00; m=108/215; ncol2=10; w=0; offset=4; strand=D; shift=10; score=0.555934; ----------cgCCCMCGca- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 10.1428 18.7938 2.98506 0.0789937 0.779978 73.0394 0.052912 12.7618 6.82934 42.8018 0 c 0 0 0 0 0 0 0 0 0 0 65.8094 3.20121 95.93 99.6449 91.9744 25.3049 99.5715 4.33385 62.2543 16.064 0 g 0 0 0 0 0 0 0 0 0 0 5.56648 63.6582 0.255028 0.23731 0.206286 0.836105 0.0424629 74.1771 8.0143 21.9021 0 t 0 0 0 0 0 0 0 0 0 0 18.4814 14.3468 0.829957 0.0388368 7.03931 0.819549 0.333163 8.72729 22.9021 19.2321 0

M02931_2.00_shift8 (M02931_2.00)
; oligos_7nt_mkv5_m1 versus M02931_2.00; m=109/215; ncol2=15; w=0; offset=2; strand=D; shift=8; score=0.555026; --------wmCGCCCACGCAh ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.3199 65.7557 0 1.79558 0.0547945 0.435967 0.214362 79.5125 0 0.42333 0.162075 88.6555 31.6327 c 0 0 0 0 0 0 0 0 24.1051 32.348 99.1347 0.644567 99.6164 99.1281 95.1233 20.3134 99.7272 0.70555 98.9735 3.06122 26.8707 g 0 0 0 0 0 0 0 0 9.34004 0.725042 0.270416 96.639 0.109589 0.217984 0.267953 0 0.163666 97.9774 0 6.18247 7.82313 t 0 0 0 0 0 0 0 0 35.2349 1.17122 0.594916 0.92081 0.219178 0.217984 4.39443 0.174115 0.109111 0.893697 0.864398 2.10084 33.6735

M02885_2.00_shift9 (EGR2)
; oligos_7nt_mkv5_m1 versus M02885_2.00 (EGR2); m=110/215; ncol2=11; w=0; offset=3; strand=D; shift=9; score=0.554661; ---------mCGCCCACGCa- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 55.8398 0 6.94444 0.370828 1.4944 0 93.9606 0 2.45883 0.232019 60.5245 0 c 0 0 0 0 0 0 0 0 0 32.7703 93.8862 0 96.2917 96.7621 82.3331 4.814 98.4355 0 91.9374 5.48951 0 g 0 0 0 0 0 0 0 0 0 4.53668 1.69492 87.8296 1.54512 0.933998 2.13124 1.13786 0.125156 93.5746 1.16009 18.951 0 t 0 0 0 0 0 0 0 0 0 6.85328 4.41889 5.22599 1.79234 0.809465 15.5356 0.0875274 1.4393 3.9666 6.67053 15.035 0

M00233_2.00_shift10 (EGR2)
; oligos_7nt_mkv5_m1 versus M00233_2.00 (EGR2); m=111/215; ncol2=10; w=0; offset=4; strand=D; shift=10; score=0.554607; ----------crCCCmCgya- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 17.7414 25.6279 11.1401 0.99736 5.34589 49.217 2.94523 21.4637 12.4753 35.9394 0 c 0 0 0 0 0 0 0 0 0 0 50.1942 8.11473 80.6845 95.3311 71.9757 40.2955 90.034 11.205 47.1698 19.5277 0 g 0 0 0 0 0 0 0 0 0 0 11.6569 43.9776 2.18267 2.99623 2.26218 5.4534 1.9159 49.2231 14.2073 21.1541 0 t 0 0 0 0 0 0 0 0 0 0 20.4075 22.2798 5.99273 0.675269 20.4162 5.03412 5.10483 18.1082 26.1475 23.3789 0

M09036_2.00_rc_shift4 (E2F4_rc)
; oligos_7nt_mkv5_m1 versus M09036_2.00_rc (E2F4_rc); m=112/215; ncol2=13; w=-2; offset=-2; strand=R; shift=4; score=0.552483; ----hytYCCCGCCcys---- ; cor=; Ncor= a 0 0 0 0 32.6 14.8 4.2 1.2 0.2 0.8 1.6 1.4 0.2 1.6 13 16.4 9 0 0 0 0 c 0 0 0 0 30.6 28.2 22.2 25 89.4 95 94.6 0 95.8 69.6 52.6 46.2 50.6 0 0 0 0 g 0 0 0 0 11.4 18.8 20 2.2 1.4 3.8 0.2 97.4 3.6 18.8 10 9.6 25.8 0 0 0 0 t 0 0 0 0 25.4 38.2 53.6 71.6 9 0.4 3.6 1.2 0.4 10 24.4 27.8 14.6 0 0 0 0

M02879_2.00_shift3 (SP4)
; oligos_7nt_mkv5_m1 versus M02879_2.00 (SP4); m=113/215; ncol2=17; w=-3; offset=-3; strand=D; shift=3; score=0.552252; ---ywrGCCACGCCCmCtyy- ; cor=; Ncor= a 0 0 0 13.8895 51.7012 56.719 16.3731 5.52369 0.0431593 75.1376 0.0428816 0.181061 0.0426712 0.0633312 0 42.3378 2.06317 21.4528 13.7621 22.9582 0 c 0 0 0 31.4247 3.71163 3.18499 0.104621 94.3913 96.9357 24.7874 99.9571 0.253485 99.872 99.8944 98.4184 55.9135 78.0719 16.8799 28.5174 28.0152 0 g 0 0 0 18.4075 1.54651 35.7548 83.2432 0 0.107898 0.0750375 0 98.5696 0.0853424 0.0422208 0.0632644 0.207087 0.383422 4.40346 8.58359 13.2004 0 t 0 0 0 36.2782 43.0407 4.34119 0.278989 0.0849798 2.91325 0 0 0.995836 0 0 1.51835 1.54165 19.4815 57.2638 49.1369 35.8262 0

M00632_2.00_shift7 (M00632_2.00)
; oligos_7nt_mkv5_m1 versus M00632_2.00; m=114/215; ncol2=10; w=0; offset=1; strand=D; shift=7; score=0.549744; -------aymCGCCCcy---- ; cor=; Ncor= a 0 0 0 0 0 0 0 31.043 14.1167 57.0189 0.0225276 8.58113 0.0225276 0.0225276 0.0225276 21.794 10.9058 0 0 0 0 c 0 0 0 0 0 0 0 22.9857 37.4062 42.936 99.9324 0.0225276 99.9324 99.9324 99.9324 66.7367 35.9751 0 0 0 0 g 0 0 0 0 0 0 0 22.9857 14.1167 0.0225276 0.0225276 91.3738 0.0225276 0.0225276 0.0225276 2.03687 10.9058 0 0 0 0 t 0 0 0 0 0 0 0 22.9857 34.3604 0.0225276 0.0225276 0.0225276 0.0225276 0.0225276 0.0225276 9.43238 42.2132 0 0 0 0

M00765_2.00_shift8 (M00765_2.00)
; oligos_7nt_mkv5_m1 versus M00765_2.00; m=115/215; ncol2=9; w=0; offset=2; strand=D; shift=8; score=0.548492; --------cmCGCCCMc---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 17.435 41.7838 0.00455751 0.00455751 0.00455751 0.00455751 0.00455751 30.5774 7.56959 0 0 0 0 c 0 0 0 0 0 0 0 0 47.6951 58.2071 99.9863 8.49137 99.9863 91.4995 99.9863 69.4134 59.8878 0 0 0 0 g 0 0 0 0 0 0 0 0 17.435 0.00455751 0.00455751 91.4995 0.00455751 8.49137 0.00455751 0.00455751 7.56959 0 0 0 0 t 0 0 0 0 0 0 0 0 17.435 0 0 0 0 0 0 0 24.973 0 0 0 0

M08290_2.00_shift6 (MAZ)
; oligos_7nt_mkv5_m1 versus M08290_2.00 (MAZ); m=116/215; ncol2=9; w=0; offset=0; strand=D; shift=6; score=0.54622; ------sCCCCkCCC------ ; cor=; Ncor= a 0 0 0 0 0 0 2.21823 0.059952 0.059952 0.059952 0.059952 8.93285 0.059952 0.059952 0.059952 0 0 0 0 0 0 c 0 0 0 0 0 0 52.8177 92.1463 99.8201 99.8201 99.8201 0.059952 99.8201 99.8201 88.789 0 0 0 0 0 0 g 0 0 0 0 0 0 37.7098 0.059952 0.059952 0.059952 0.059952 35.3118 0.059952 0.059952 0.059952 0 0 0 0 0 0 t 0 0 0 0 0 0 7.2542 7.73381 0.059952 0.059952 0.059952 55.6954 0.059952 0.059952 11.0911 0 0 0 0 0 0

M07652_2.00_shift10 (ZNF543)
; oligos_7nt_mkv5_m1 versus M07652_2.00 (ZNF543); m=117/215; ncol2=12; w=0; offset=4; strand=D; shift=10; score=0.545881; ----------sGsCCCCKCCc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 3.72984 0.100806 0.504032 0.100806 0.100806 0.100806 0.100806 0.100806 0.100806 11.3911 14.2137 c 0 0 0 0 0 0 0 0 0 0 31.9556 0.100806 50.1008 96.875 70.2621 87.6008 99.6976 0.504032 98.8911 88.4073 51.3105 g 0 0 0 0 0 0 0 0 0 0 64.2137 88.4073 30.746 0.100806 9.375 8.97177 0.100806 25.9073 0.504032 0.100806 20.6653 t 0 0 0 0 0 0 0 0 0 0 0.100806 11.3911 18.6492 2.92339 20.2621 3.32661 0.100806 73.4879 0.504032 0.100806 13.8105

M07754_2.00_shift10 (ZNF468)
; oligos_7nt_mkv5_m1 versus M07754_2.00 (ZNF468); m=118/215; ncol2=12; w=0; offset=4; strand=D; shift=10; score=0.543066; ----------CrCCCCCTCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 16.3043 42.6812 0.942029 0.0724638 0.0724638 0.0724638 0.0724638 2.97101 0.0724638 0.942029 0.942029 c 0 0 0 0 0 0 0 0 0 0 77.7536 0.942029 84.7101 98.913 88.4783 99.7826 99.4928 0.0724638 99.7826 98.3333 93.4058 g 0 0 0 0 0 0 0 0 0 0 2.10145 46.1594 9.92754 0.362319 0.0724638 0.0724638 0.0724638 0.652174 0.0724638 0.362319 0.942029 t 0 0 0 0 0 0 0 0 0 0 3.84058 10.2174 4.42029 0.652174 11.3768 0.0724638 0.362319 96.3043 0.0724638 0.362319 4.71014

M04525_2.00_shift2 (SP2)
; oligos_7nt_mkv5_m1 versus M04525_2.00 (SP2); m=119/215; ncol2=17; w=-4; offset=-4; strand=D; shift=2; score=0.542892; --mTAAGyCCCGCCCmCyy-- ; cor=; Ncor= a 0 0 32.2825 5.96175 70.5409 80.3629 5.3202 4.12121 1.7744 1.94411 0.484262 8.55057 0 0.601685 2.79126 48.3755 2.73973 13.0852 18.9155 0 0 c 0 0 38.8398 19.2351 8.74568 8.96478 12.5123 55.2727 98.0989 95.5043 95.3995 5.42231 97.786 95.4272 93.932 46.9314 84.5579 26.5306 25.599 0 0 g 0 0 15.5107 6.4117 0 3.52188 77.931 0.969697 0.126743 1.57959 2.66344 81.3347 0 3.12876 0 2.64741 0.124533 0 11.0971 0 0 t 0 0 13.367 68.3915 20.7135 7.15048 4.23645 39.6364 0 0.972053 1.45278 4.69239 2.21402 0.842359 3.2767 2.04573 12.5778 60.3842 44.3884 0 0

M08298_2.00_shift5 (KLF7)
; oligos_7nt_mkv5_m1 versus M08298_2.00 (KLF7); m=120/215; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.542668; -----ggCcmCGCCCm----- ; cor=; Ncor= a 0 0 0 0 0 20.9622 15.4639 9.2784 19.9313 32.3024 0 19.244 0 0 0 29.2096 0 0 0 0 0 c 0 0 0 0 0 20.2749 17.5258 88.6598 61.512 67.6976 100 0 100 100 100 37.1134 0 0 0 0 0 g 0 0 0 0 0 46.7354 57.0447 0 0 0 0 80.756 0 0 0 9.622 0 0 0 0 0 t 0 0 0 0 0 12.0275 9.9656 2.0619 18.5567 0 0 0 0 0 0 24.055 0 0 0 0 0

M08963_2.00_shift2 (M08963_2.00)
; oligos_7nt_mkv5_m1 versus M08963_2.00; m=121/215; ncol2=24; w=-4; offset=-4; strand=D; shift=2; score=0.541859; --CCCsgCYCCkCCCCCtcCc ; cor=; Ncor= a 0 0 2.45399 3.68098 12.0654 8.79346 5.31697 1.63599 1.84049 0.817996 0.817996 6.33947 0.817996 3.68098 3.47648 4.29448 2.24949 13.7014 2.86299 5.52147 8.99796 c 0 0 69.9387 71.5746 68.5072 34.7648 11.6564 93.047 69.5297 92.8425 91.411 1.43149 92.638 79.9591 73.6196 77.0961 71.7791 22.4949 57.0552 73.8241 55.2147 g 0 0 11.8609 12.8834 7.77096 38.4458 58.0777 1.84049 2.86299 2.24949 1.22699 61.1452 1.63599 4.90798 5.31697 5.52147 8.79346 23.9264 24.3354 4.90798 11.8609 t 0 0 15.7464 11.8609 11.6564 17.9959 24.9489 3.47648 25.7669 4.08998 6.54397 31.0838 4.90798 11.4519 17.5869 13.0879 17.1779 39.8773 15.7464 15.7464 23.9264

M00776_2.00_shift9 (M00776_2.00)
; oligos_7nt_mkv5_m1 versus M00776_2.00; m=122/215; ncol2=10; w=0; offset=3; strand=D; shift=9; score=0.539683; ---------mcgCCCmCgy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 28.0343 15.9193 23.9553 8.00057 1.93417 3.06438 62.2598 2.16924 21.9875 14.4571 0 0 c 0 0 0 0 0 0 0 0 0 40.1824 56.1223 8.72499 89.078 91.8062 79.0315 27.6968 92.2383 7.03203 46.117 0 0 g 0 0 0 0 0 0 0 0 0 12.2243 9.27695 49.2146 0.00744296 5.58274 1.29673 5.37263 2.25777 55.1731 13.3455 0 0 t 0 0 0 0 0 0 0 0 0 19.5589 18.6815 18.1051 2.91396 0.67684 16.6074 4.67074 3.33468 15.8074 26.0804 0 0

M06160_2.00_shift3 (M06160_2.00)
; oligos_7nt_mkv5_m1 versus M06160_2.00; m=123/215; ncol2=15; w=-3; offset=-3; strand=D; shift=3; score=0.53818; ---kwrGCCmCGCCCmcy--- ; cor=; Ncor= a 0 0 0 11.04 33.6 27.8219 17.3291 6.51828 4.45151 39.4277 0.63593 3.6566 0.794913 0.63593 1.27186 43.0843 7.3955 22.8525 0 0 0 c 0 0 0 19.04 8.96 11.2878 0.953895 81.2401 72.496 60.5723 99.2051 0 99.2051 99.3641 81.876 42.1304 62.701 27.2285 0 0 0 g 0 0 0 25.12 14.4 42.4483 74.2448 5.40541 1.27186 0 0 90.461 0 0 0 1.43084 7.55627 13.128 0 0 0 t 0 0 0 44.8 43.04 18.442 7.47218 6.83625 21.7806 0 0.158983 5.88235 0 0 16.8521 13.3545 22.3473 36.7909 0 0 0

M09506_2.00_shift10 (EGR1)
; oligos_7nt_mkv5_m1 versus M09506_2.00 (EGR1); m=124/215; ncol2=10; w=0; offset=4; strand=D; shift=10; score=0.537074; ----------CrCCCMCrCa- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 2.4 42.2 0.1 2.4 0.1 71.6 0.1 30 0.4 65.8 0 c 0 0 0 0 0 0 0 0 0 0 94 1 99.7 97.3 97.1 28.2 99.7 2.3 88.2 14.2 0 g 0 0 0 0 0 0 0 0 0 0 0.2 41.5 0.1 0.2 0.1 0.1 0.1 52.3 3.6 7.2 0 t 0 0 0 0 0 0 0 0 0 0 3.4 15.3 0.1 0.1 2.7 0.1 0.1 15.4 7.8 12.8 0

M07658_2.00_shift9 (ZNF571)
; oligos_7nt_mkv5_m1 versus M07658_2.00 (ZNF571); m=125/215; ncol2=15; w=0; offset=3; strand=D; shift=9; score=0.537074; ---------CcGCCkCmGCCk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0.213919 16.4147 9.59782 0.213919 0.213919 1.92527 0.213919 37.008 0.213919 0.213919 1.0696 1.0696 c 0 0 0 0 0 0 0 0 0 76.255 63.4769 1.92527 96.7912 88.263 5.34798 87.4073 29.3069 7.03079 99.3582 84.8688 15.5876 g 0 0 0 0 0 0 0 0 0 23.3172 0.213919 88.263 2.78095 1.92527 63.4484 10.4535 23.2316 92.5414 0.213919 13.8477 46.3919 t 0 0 0 0 0 0 0 0 0 0.213919 19.8945 0.213919 0.213919 9.59782 29.2784 1.92527 10.4535 0.213919 0.213919 0.213919 36.9509

M09035_2.00_rc_shift4 (TFDP1,TFDP2,TFDP3_rc)
; oligos_7nt_mkv5_m1 versus M09035_2.00_rc (TFDP1,TFDP2,TFDP3_rc); m=126/215; ncol2=14; w=-2; offset=-2; strand=R; shift=4; score=0.535441; ----yytTCCCGCCyyyy--- ; cor=; Ncor= a 0 0 0 0 22.8 14.8 2.2 1.8 1.2 0.8 3.4 3.8 1.4 0.8 17.2 14.4 8.6 11 0 0 0 c 0 0 0 0 28.2 25.4 15.8 13 87.8 93.8 90.4 1.4 94.4 78.2 42.8 41.6 51.8 39.8 0 0 0 g 0 0 0 0 18 11.8 18.8 2 3.2 4.6 1.6 87.4 1 11.4 7.8 11 12.8 14 0 0 0 t 0 0 0 0 31 48 63.2 83.2 7.8 0.8 4.6 7.4 3.2 9.6 32.2 33 26.8 35.2 0 0 0

M00134_2.00_shift6 (M00134_2.00)
; oligos_7nt_mkv5_m1 versus M00134_2.00; m=127/215; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.53525; ------gccmCgCCCh----- ; cor=; Ncor= a 0 0 0 0 0 0 23.4441 21.9242 17.7318 51.5538 0.989471 22.8736 0.00886864 0.0191497 0.112067 34.2124 0 0 0 0 0 c 0 0 0 0 0 0 18.0766 49.7789 53.8047 35.2557 97.4574 1.03044 99.9596 99.9363 82.3801 25.8571 0 0 0 0 0 g 0 0 0 0 0 0 41.4554 11.5605 7.65501 8.95871 0.0320459 66.0217 0.0241075 0.0173274 0.0228534 7.71053 0 0 0 0 0 t 0 0 0 0 0 0 17.0239 16.7365 20.8085 4.2318 1.52107 10.0743 0 0.0271748 17.485 32.22 0 0 0 0 0

M06159_2.00_shift3 (M06159_2.00)
; oligos_7nt_mkv5_m1 versus M06159_2.00; m=128/215; ncol2=15; w=-3; offset=-3; strand=D; shift=3; score=0.535012; ---ktgRCCmCGCCCmyh--- ; cor=; Ncor= a 0 0 0 4.16667 25 20.8333 25 0 0 41.6667 0 4.16667 0 0 0 33.3333 4.34783 26.087 0 0 0 c 0 0 0 4.16667 12.5 8.33333 0 87.5 83.3333 58.3333 100 4.16667 100 100 95.8333 58.3333 47.8261 26.087 0 0 0 g 0 0 0 29.1667 8.33333 54.1667 75 0 4.16667 0 0 83.3333 0 0 0 4.16667 17.3913 8.69565 0 0 0 t 0 0 0 62.5 54.1667 16.6667 0 12.5 12.5 0 0 8.33333 0 0 4.16667 4.16667 30.4348 39.1304 0 0 0

M07614_2.00_shift6 (ZNF180)
; oligos_7nt_mkv5_m1 versus M07614_2.00 (ZNF180); m=129/215; ncol2=21; w=0; offset=0; strand=D; shift=6; score=0.53459; ------CCsCasbCcCCdCCc ; cor=; Ncor= a 0 0 0 0 0 0 0.182482 0.182482 10.4015 2.37226 49.0876 8.21168 7.48175 0.182482 3.10219 3.10219 0.182482 27.1898 0.912409 2.37226 14.781 c 0 0 0 0 0 0 92.8832 85.5839 57.1168 76.8248 19.8905 45.438 27.9197 99.4526 66.6058 73.9051 91.4234 11.1314 92.1533 70.9854 57.1168 g 0 0 0 0 0 0 6.75182 5.29197 28.6496 9.67153 21.3504 46.1679 25.7299 0.182482 16.9708 16.2409 0.182482 36.6788 5.29197 9.67153 11.1314 t 0 0 0 0 0 0 0.182482 8.94161 3.83212 11.1314 9.67153 0.182482 38.8686 0.182482 13.3212 6.75182 8.21168 25 1.64234 16.9708 16.9708

M04467_2.00_shift9 (ZNF740)
; oligos_7nt_mkv5_m1 versus M04467_2.00 (ZNF740); m=130/215; ncol2=13; w=0; offset=3; strand=D; shift=9; score=0.534488; ---------cygCCCCCCCCA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 16.3462 8.51666 16.5473 3.08014 1.76844 2.31023 1.0166 1.14401 1.92819 1.04027 2.9304 83.0305 c 0 0 0 0 0 0 0 0 0 49.2445 35.7951 15.4853 86.9019 96.9303 95.8086 98.3734 97.7793 96.6755 97.7852 95.9374 12.5147 g 0 0 0 0 0 0 0 0 0 14.011 4.99686 55.9397 9.65909 1.2012 0.627063 0.169434 0.336474 0.49867 0.402685 0.566101 1.17233 t 0 0 0 0 0 0 0 0 0 20.3984 50.6914 12.0277 0.358852 0.1001 1.25413 0.440529 0.740242 0.897606 0.771812 0.566101 3.28253

M08938_2.00_shift2 (SP1)
; oligos_7nt_mkv5_m1 versus M08938_2.00 (SP1); m=131/215; ncol2=22; w=-4; offset=-4; strand=D; shift=2; score=0.532822; --cCccscCCmgGCCCCGCCC ; cor=; Ncor= a 0 0 3.60721 5.41082 10.8216 6.61323 5.81162 6.81363 3.80762 3.60721 28.0561 15.6313 5.81162 4.00802 1.60321 6.41283 0.200401 1.002 0 0 0 c 0 0 60.9218 70.5411 62.9259 58.1162 58.7174 57.515 68.1363 70.5411 46.2926 19.0381 1.40281 91.1824 91.5832 92.5852 98.7976 0.400802 99.5992 99.1984 93.3868 g 0 0 18.6373 12.024 14.4289 23.2465 26.6533 19.6393 16.6333 17.6353 11.2224 59.519 86.7735 3.00601 0.200401 0.801603 0 95.3908 0 0.801603 0.801603 t 0 0 16.8337 12.024 11.8236 12.024 8.81764 16.0321 11.4228 8.21643 14.4289 5.81162 6.01202 1.80361 6.61323 0.200401 1.002 3.20641 0.400802 0 5.81162

M04458_2.00_shift6 (KLF16)
; oligos_7nt_mkv5_m1 versus M04458_2.00 (KLF16); m=132/215; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.529602; ------rcCACGCCCc----- ; cor=; Ncor= a 0 0 0 0 0 0 26.7813 23.9973 3.34076 78.7996 0 21.2741 0 1.33281 2.78963 22.6454 0 0 0 0 0 c 0 0 0 0 0 0 10.8518 54.7166 90.6459 10.2614 100 2.62548 100 95.7272 80.1444 57.5348 0 0 0 0 0 g 0 0 0 0 0 0 52.9075 8.29039 2.37565 2.19426 0 73.0116 0 1.17601 0.0656383 3.1941 0 0 0 0 0 t 0 0 0 0 0 0 9.45946 12.9957 3.63771 8.74476 0 3.0888 0 1.76401 17.0003 16.6257 0 0 0 0 0

M03705_2.00_shift6 (M03705_2.00)
; oligos_7nt_mkv5_m1 versus M03705_2.00; m=133/215; ncol2=11; w=0; offset=0; strand=D; shift=6; score=0.526108; ------rmCACrCCCmc---- ; cor=; Ncor= a 0 0 0 0 0 0 30.7967 30.3548 0 88.1119 3.4188 40.0564 6.49926 6.6482 0 40.2102 9.44386 0 0 0 0 c 0 0 0 0 0 0 10.9394 52.2996 90.7781 5.17483 89.7436 1.97461 93.0576 87.2576 80.3571 42.5756 66.107 0 0 0 0 g 0 0 0 0 0 0 44.1141 1.97109 4.89914 6.71329 0 48.6601 0 1.52355 3.06122 1.44547 0.629591 0 0 0 0 t 0 0 0 0 0 0 14.1498 15.3745 4.32277 0 6.83761 9.30889 0.443131 4.57064 16.5816 15.7687 23.8195 0 0 0 0

M04698_2.00_rc_shift7 (E2F2_rc)
; oligos_7nt_mkv5_m1 versus M04698_2.00_rc (E2F2_rc); m=134/215; ncol2=11; w=0; offset=1; strand=R; shift=7; score=0.525628; -------GCGCgCsCmCs--- ; cor=; Ncor= a 0 0 0 0 0 0 0 4.46927 0 10.2362 0 12.3134 0 8.48057 0 25.7576 0 7.26744 0 0 0 c 0 0 0 0 0 0 0 22.905 97.8142 11.0236 89.5 11.9403 97.8142 25.4417 85.6459 42.6407 97.8142 44.7674 0 0 0 g 0 0 0 0 0 0 0 70.9497 2.18579 70.4724 6.5 66.791 0 63.2509 10.5263 19.3723 2.18579 36.6279 0 0 0 t 0 0 0 0 0 0 0 1.67598 0 8.26772 4 8.95522 2.18579 2.82686 3.82775 12.2294 0 11.3372 0 0 0

M07715_2.00_shift9 (ZNF100)
; oligos_7nt_mkv5_m1 versus M07715_2.00 (ZNF100); m=135/215; ncol2=15; w=0; offset=3; strand=D; shift=9; score=0.524581; ---------ccGCCGCCGCCd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 14.2031 24.7429 14.2031 1.09254 0.321337 16.2596 0.0642674 1.09254 8.80463 0.0642674 0.321337 27.5707 c 0 0 0 0 0 0 0 0 0 51.2211 35.2828 0.578406 93.1234 96.9794 1.34961 96.9794 95.1799 0.0642674 99.8072 97.7506 14.7172 g 0 0 0 0 0 0 0 0 0 23.9717 24.7429 81.2982 5.71979 1.09254 81.0411 0.0642674 0.0642674 74.1003 0.0642674 0.835476 32.455 t 0 0 0 0 0 0 0 0 0 10.6041 15.2314 3.92031 0.0642674 1.60668 1.34961 2.89203 3.66324 17.0308 0.0642674 1.09254 25.2571

M00787_2.00_shift6 (M00787_2.00)
; oligos_7nt_mkv5_m1 versus M00787_2.00; m=136/215; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.522406; ------rccmCrCCCw----- ; cor=; Ncor= a 0 0 0 0 0 0 25.986 23.1178 19.3153 50.6834 0.194537 30.2468 0.00336185 0.00625172 2.24714 39.1927 0 0 0 0 0 c 0 0 0 0 0 0 15.6045 47.0215 51.4647 34.6604 99.7699 0.00388508 99.9566 99.9931 79.0168 22.3872 0 0 0 0 0 g 0 0 0 0 0 0 41.1638 13.0737 10.2872 8.63306 0.00306676 62.1399 0.00261821 0.000459717 0.0148413 12.4098 0 0 0 0 0 t 0 0 0 0 0 0 17.2456 16.787 18.9328 6.02308 0.0324799 7.60943 0.0374307 0 18.7213 26.0102 0 0 0 0 0

M07717_2.00_shift5 (ZNF441)
; oligos_7nt_mkv5_m1 versus M07717_2.00 (ZNF441); m=137/215; ncol2=12; w=-1; offset=-1; strand=D; shift=5; score=0.520345; -----rrCTCCGcCyCc---- ; cor=; Ncor= a 0 0 0 0 0 26.6892 47.4099 0.112613 0.112613 0.112613 0.112613 0.112613 0.563063 0.112613 0.563063 0.112613 15.8784 0 0 0 0 c 0 0 0 0 0 18.5811 1.46396 99.6622 21.2838 99.6622 99.6622 0.112613 65.4279 80.7432 56.4189 69.9324 47.8604 0 0 0 0 g 0 0 0 0 0 48.3108 51.0135 0.112613 0.112613 0.112613 0.112613 99.6622 10.9234 7.77027 6.41892 20.3829 22.1847 0 0 0 0 t 0 0 0 0 0 6.41892 0.112613 0.112613 78.491 0.112613 0.112613 0.112613 23.0856 11.3739 36.5991 9.57207 14.0766 0 0 0 0

M09030_2.00_rc_shift4 (E2F1_rc)
; oligos_7nt_mkv5_m1 versus M09030_2.00_rc (E2F1_rc); m=138/215; ncol2=14; w=-2; offset=-2; strand=R; shift=4; score=0.519786; ----yyyTCCCGCCcycy--- ; cor=; Ncor= a 0 0 0 0 16.8 9.4 1 3.4 0.8 0.6 1.8 1.8 1 1.4 24.2 22.8 11.2 13.4 0 0 0 c 0 0 0 0 39.6 36.6 27.2 9 89 89 95.8 0.4 96.6 70.4 46.6 29 45.2 37.8 0 0 0 g 0 0 0 0 16.4 14 6.4 2 3.4 8.2 0.8 92.2 0.6 20 10.2 21 20 16 0 0 0 t 0 0 0 0 27.2 40 65.4 85.6 6.8 2.2 1.6 5.6 1.8 8.2 19 27.2 23.6 32.8 0 0 0

M04526_2.00_shift2 (SP2)
; oligos_7nt_mkv5_m1 versus M04526_2.00 (SP2); m=139/215; ncol2=17; w=-4; offset=-4; strand=D; shift=2; score=0.519758; --wTwAGTCCCGCCCmCtT-- ; cor=; Ncor= a 0 0 28.8199 7.42857 58.2969 75.3333 5.18379 1.1976 3.08422 1.18203 3.22953 7.5 1.75439 1.93705 3.97276 34.4009 2.4619 15.9272 10.3106 0 0 c 0 0 24.9689 14.2857 11.0262 12.4762 17.9076 24.9102 95.0178 94.7991 92.7336 8.17308 93.5673 97.4576 87.0602 60.6168 80.891 12.7418 16.3975 0 0 g 0 0 17.6398 2.97143 1.41921 2.85714 73.0443 2.15569 0.118624 1.41844 1.61476 75.9615 2.10526 0.605327 2.49716 1.89798 0.820633 3.9818 4.47205 0 0 t 0 0 28.5714 75.3143 29.2576 9.33333 3.86428 71.7365 1.77936 2.60047 2.42215 8.36538 2.5731 0 6.46992 3.08422 15.8265 67.3493 68.8199 0 0

M01862_2.00_shift8 (M01862_2.00)
; oligos_7nt_mkv5_m1 versus M01862_2.00; m=140/215; ncol2=9; w=0; offset=2; strand=D; shift=8; score=0.518244; --------hmCGCCCmy---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.7384 42.0657 0.00439598 0.00439598 0.00439598 0.00439598 0.00439598 40.0281 6.56255 0 0 0 0 c 0 0 0 0 0 0 0 0 26.8904 57.9255 99.9868 0.00439598 99.9868 99.9868 99.9868 59.9631 55.5822 0 0 0 0 g 0 0 0 0 0 0 0 0 18.4418 0.00439598 0.00439598 99.9868 0.00439598 0.00439598 0.00439598 0.00439598 6.56255 0 0 0 0 t 0 0 0 0 0 0 0 0 27.9294 0 0 0 0 0 0 0 31.2927 0 0 0 0

M01864_2.00_shift12 (M01864_2.00)
; oligos_7nt_mkv5_m1 versus M01864_2.00; m=141/215; ncol2=9; w=0; offset=6; strand=D; shift=12; score=0.517696; ------------CCCmCGcat ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 16.0527 1.55222 2.3878 48.8627 1.22013 16.7571 8.3944 43.7023 24.4582 c 0 0 0 0 0 0 0 0 0 0 0 0 73.3965 93.6616 88.2675 47.8952 96.4432 2.79778 59.0016 13.7001 24.704 g 0 0 0 0 0 0 0 0 0 0 0 0 4.64539 4.13583 1.01043 1.76653 0.65636 68.6365 10.4601 22.3629 19.4329 t 0 0 0 0 0 0 0 0 0 0 0 0 5.90545 0.650307 8.33424 1.47553 1.68027 11.8086 22.144 20.2347 31.4049

M04456_2.00_shift5 (KLF2)
; oligos_7nt_mkv5_m1 versus M04456_2.00 (KLF2); m=142/215; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.51636; -----srCCmCrCCCm----- ; cor=; Ncor= a 0 0 0 0 0 21.2044 38.0149 6.81334 0.934809 48.188 0 37.9653 0 1.70501 0 31.1281 0 0 0 0 0 c 0 0 0 0 0 34.4925 19.6371 83.6764 87.0111 42.1117 100 1.9024 99.2424 95.724 90.5994 30.393 0 0 0 0 0 g 0 0 0 0 0 26.4348 37.46 6.52945 10.9717 6.82561 0 59.5533 0.701459 2.24628 3.61168 17.7269 0 0 0 0 0 t 0 0 0 0 0 17.8682 4.88794 2.98084 1.08241 2.87466 0 0.578991 0.0561167 0.324763 5.78893 20.752 0 0 0 0 0

M08243_2.00_shift6 (KLF4)
; oligos_7nt_mkv5_m1 versus M08243_2.00 (KLF4); m=143/215; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.515482; ------gCCmCrCCCw----- ; cor=; Ncor= a 0 0 0 0 0 0 21.5541 6.6731 2.8826 47.0176 0.7831 49.183 0.3685 0.2997 0.1386 40.7052 0 0 0 0 0 c 0 0 0 0 0 0 6.4761 87.4843 89.9686 50.1722 98.364 0.2536 98.4801 99.0776 97.6252 23.5703 0 0 0 0 0 g 0 0 0 0 0 0 66.0954 3.0022 1.0613 1.8427 0.346 44.1938 0.8289 0.3 0.2081 1.8688 0 0 0 0 0 t 0 0 0 0 0 0 5.8745 2.8404 6.0875 0.9675 0.5068 6.3696 0.3225 0.3227 2.028 33.8558 0 0 0 0 0

M08246_2.00_shift6 (KLF10)
; oligos_7nt_mkv5_m1 versus M08246_2.00 (KLF10); m=144/215; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.515482; ------gCCmCrCCCw----- ; cor=; Ncor= a 0 0 0 0 0 0 21.554 6.673 2.8825 47.0175 0.7831 49.183 0.3685 0.2997 0.1386 40.7052 0 0 0 0 0 c 0 0 0 0 0 0 6.4761 87.4843 89.9687 50.1723 98.3641 0.2537 98.4802 99.0777 97.6252 23.5703 0 0 0 0 0 g 0 0 0 0 0 0 66.0954 3.0023 1.0613 1.8427 0.3461 44.1938 0.8289 0.3001 0.2082 1.8688 0 0 0 0 0 t 0 0 0 0 0 0 5.8745 2.8403 6.0874 0.9675 0.5068 6.3696 0.3225 0.3227 2.0279 33.8557 0 0 0 0 0

M00779_2.00_shift6 (M00779_2.00)
; oligos_7nt_mkv5_m1 versus M00779_2.00; m=145/215; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.515316; ------rccmCrCCYh----- ; cor=; Ncor= a 0 0 0 0 0 0 27.1429 23.9158 19.9845 44.052 6.52389 36.7441 3.85933 3.10594 4.58462 32.2624 0 0 0 0 0 c 0 0 0 0 0 0 17.8341 41.8687 46.7566 34.3077 84.3918 0.00329278 94.6792 96.8649 70.2954 25.126 0 0 0 0 0 g 0 0 0 0 0 0 36.2745 15.4026 12.8707 12.0056 0.00980827 49.5994 0.013043 0.0134782 0.0240579 15.3929 0 0 0 0 0 t 0 0 0 0 0 0 18.7485 18.8128 20.3882 9.6347 9.07452 13.6533 1.44845 0.0156594 25.0959 27.2187 0 0 0 0 0

M00242_2.00_shift9 (KLF11)
; oligos_7nt_mkv5_m1 versus M00242_2.00 (KLF11); m=146/215; ncol2=8; w=0; offset=3; strand=D; shift=9; score=0.514044; ---------mCGCCCCC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 35.6838 0.052521 5.30462 5.30462 0.052521 0.052521 21.0609 0.0766871 0 0 0 0 c 0 0 0 0 0 0 0 0 0 64.1738 99.8424 10.5567 94.5903 94.5903 99.8424 78.834 92.1012 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0.0712251 0.052521 84.0861 0.052521 5.30462 0.052521 0.052521 0.0766871 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0.0712251 0.052521 0.052521 0.052521 0.052521 0.052521 0.052521 7.7454 0 0 0 0

M00241_2.00_shift9 (KLF11)
; oligos_7nt_mkv5_m1 versus M00241_2.00 (KLF11); m=147/215; ncol2=8; w=0; offset=3; strand=D; shift=9; score=0.509462; ---------mCGCCCCC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 38.4202 0.0499002 10.0299 5.03992 5.03992 0.0499002 25 0.0664894 0 0 0 0 c 0 0 0 0 0 0 0 0 0 61.4264 99.8503 10.0299 94.8603 89.8703 99.8503 74.9002 93.1516 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0.0766871 0.0499002 79.8902 0.0499002 5.03992 0.0499002 0.0499002 0.0664894 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0.0766871 0.0499002 0.0499002 0.0499002 0.0499002 0.0499002 0.0499002 6.71543 0 0 0 0

M08988_2.00_shift1 (M08988_2.00)
; oligos_7nt_mkv5_m1 versus M08988_2.00; m=148/215; ncol2=22; w=-5; offset=-5; strand=D; shift=1; score=0.509282; -yyyyyyycyCycYyCCtCCy ; cor=; Ncor= a 0 6.6 10.8 7.6 12.2 8 5.8 4.4 4.2 5.8 8.8 21.6 2.8 4 3.4 1.4 3 23.8 1 3.4 1.2 c 0 56.2 43 44.6 55.6 45.6 57 51.2 64.8 55.4 69.8 33.2 65.6 68 66.6 85.2 90.6 2.6 82.6 86.6 67.4 g 0 9.8 10.6 20.4 6.2 13.4 7.2 7.8 12 5.4 4 13.4 20.2 0.8 3.4 2 1 8.8 11.2 1.8 1.2 t 0 27.4 35.6 27.4 26 33 30 36.6 19 33.4 17.4 31.8 11.4 27.2 26.6 11.4 5.4 64.8 5.2 8.2 30.2

M08870_2.00_shift1 (MAZ)
; oligos_7nt_mkv5_m1 versus M08870_2.00 (MAZ); m=149/215; ncol2=22; w=-5; offset=-5; strand=D; shift=1; score=0.509282; -yyyyyyycyCycYyCCtCCy ; cor=; Ncor= a 0 6.6 10.8 7.6 12.2 8 5.8 4.4 4.2 5.8 8.8 21.6 2.8 4 3.4 1.4 3 23.8 1 3.4 1.2 c 0 56.2 43 44.6 55.6 45.6 57 51.2 64.8 55.4 69.8 33.2 65.6 68 66.6 85.2 90.6 2.6 82.6 86.6 67.4 g 0 9.8 10.6 20.4 6.2 13.4 7.2 7.8 12 5.4 4 13.4 20.2 0.8 3.4 2 1 8.8 11.2 1.8 1.2 t 0 27.4 35.6 27.4 26 33 30 36.6 19 33.4 17.4 31.8 11.4 27.2 26.6 11.4 5.4 64.8 5.2 8.2 30.2

M04410_2.00_shift6 (KLF5)
; oligos_7nt_mkv5_m1 versus M04410_2.00 (KLF5); m=150/215; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.50877; ------vcCACrCCCh----- ; cor=; Ncor= a 0 0 0 0 0 0 30.3774 20.3306 0 72.2525 1.67921 37.3512 0.641399 4.19825 4.68673 31.3639 0 0 0 0 0 c 0 0 0 0 0 0 26.3522 67.2727 88.4872 20.663 92.1251 3.18452 92.7697 92.7697 78.4904 35.5123 0 0 0 0 0 g 0 0 0 0 0 0 29.7484 5.06887 0 0 0 47.3512 2.91545 0 1.57869 5.65682 0 0 0 0 0 t 0 0 0 0 0 0 13.522 7.32782 11.5128 7.08447 6.19572 12.1131 3.67347 3.03207 15.2442 27.467 0 0 0 0 0

M03704_2.00_shift6 (M03704_2.00)
; oligos_7nt_mkv5_m1 versus M03704_2.00; m=151/215; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.505814; ------rCCACrCCCh----- ; cor=; Ncor= a 0 0 0 0 0 0 37.9958 13.3205 9.30476 70.6121 0 35.0795 0 3.46062 0.998238 39.3436 0 0 0 0 0 c 0 0 0 0 0 0 15.2401 75.7239 82.0178 19.982 99.8727 1.39697 99.241 93.6158 92.1315 29.4558 0 0 0 0 0 g 0 0 0 0 0 0 43.8935 4.92278 3.816 5.49055 0 60.8847 0 1.43198 0.0587199 5.35937 0 0 0 0 0 t 0 0 0 0 0 0 2.87056 6.03282 4.86147 3.91539 0.127307 2.63873 0.759013 1.49165 6.81151 25.8413 0 0 0 0 0

M04554_2.00_shift6 (KLF11)
; oligos_7nt_mkv5_m1 versus M04554_2.00 (KLF11); m=152/215; ncol2=22; w=0; offset=0; strand=D; shift=6; score=0.503758; ------rcCACrCCCmcgcCA ; cor=; Ncor= a 0 0 0 0 0 0 28.8489 19.7979 10.425 69.4809 0.760334 31.7458 0 0.531684 0.118977 43.5945 7.26678 20.5346 22.0646 6.51694 85.812 c 0 0 0 0 0 0 19.4326 61.5644 79.0845 22.8657 97.6012 0.514664 99.9237 99.4358 88.0329 43.2999 67.6378 22.4113 60.5522 86.8458 12.7801 g 0 0 0 0 0 0 43.066 9.90831 3.8113 6.64951 0.0428357 63.7693 0 0.0108507 0.198295 1.866 6.37207 42.8805 4.37582 1.56407 1.14019 t 0 0 0 0 0 0 8.65248 8.72942 6.67912 1.00386 1.59563 3.97026 0.0763359 0.0217014 11.6498 11.2396 18.7234 14.1735 13.0074 5.07319 0.267698

M04464_2.00_shift5 (KLF4)
; oligos_7nt_mkv5_m1 versus M04464_2.00 (KLF4); m=153/215; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.503564; -----crCCmCrCCCa----- ; cor=; Ncor= a 0 0 0 0 0 16.7449 31.7536 4.96811 6.89314 53.6107 0 33.5846 0 1.09954 0 38.0943 0 0 0 0 0 c 0 0 0 0 0 43.525 22.8541 85.8006 84.3008 38.4297 96.0541 0 99.7269 98.6111 96.1806 22.9896 0 0 0 0 0 g 0 0 0 0 0 18.0164 35.545 3.12185 4.86478 4.50207 0.244269 61.163 0 0.270062 0.865475 15.0068 0 0 0 0 0 t 0 0 0 0 0 21.7136 9.84729 6.10943 3.94129 3.45759 3.70162 5.25245 0.273117 0.0192901 2.9539 23.9092 0 0 0 0 0

M00375_2.00_shift11 (M00375_2.00)
; oligos_7nt_mkv5_m1 versus M00375_2.00; m=154/215; ncol2=9; w=0; offset=5; strand=D; shift=11; score=0.502234; -----------gCCcmCgca- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 24.3908 13.6334 2.50247 7.7362 48.4453 2.10408 20.8312 15.2373 34.2838 0 c 0 0 0 0 0 0 0 0 0 0 0 12.7331 74.6286 84.5445 67.0817 40.4649 91.2753 12.1393 46.7 21.0031 0 g 0 0 0 0 0 0 0 0 0 0 0 41.026 2.7802 9.1823 3.72814 5.15741 0.424807 48.7377 13.9258 23.919 0 t 0 0 0 0 0 0 0 0 0 0 0 21.8501 8.95779 3.77076 21.454 5.93243 6.19585 18.2918 24.1369 20.7941 0

M09502_2.00_shift6 (KLF5)
; oligos_7nt_mkv5_m1 versus M09502_2.00 (KLF5); m=155/215; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.500217; ------GCCmCrCCCw----- ; cor=; Ncor= a 0 0 0 0 0 0 14.8 18.4 2.2 52.6 1.2 49 0.1 0.1 0.1 35.7 0 0 0 0 0 c 0 0 0 0 0 0 1.9 69.4 92.2 40.5 97.2 0.1 99.7 99.7 88.2 22.4 0 0 0 0 0 g 0 0 0 0 0 0 75.6 6 0.1 2.3 0.1 42.8 0.1 0.1 0.1 5.5 0 0 0 0 0 t 0 0 0 0 0 0 7.7 6.2 5.5 4.6 1.5 8.1 0.1 0.1 11.6 36.4 0 0 0 0 0

M04606_2.00_shift3 (SP1)
; oligos_7nt_mkv5_m1 versus M04606_2.00 (SP1); m=156/215; ncol2=15; w=-3; offset=-3; strand=D; shift=3; score=0.500077; ---twrGCCmCGCCCmCw--- ; cor=; Ncor= a 0 0 0 16.9909 56.8037 51.2491 18.8739 5.40541 0.947551 64.5165 0.218648 12.3046 0 0 0 52.4992 4.05832 28.9973 0 0 0 c 0 0 0 22.2937 5.17881 2.43829 1.62252 91.9364 84.7191 33.994 99.4534 1.27804 100 100 93.8199 43.1881 71.4114 22.203 0 0 0 g 0 0 0 16.7869 2.76005 42.8571 77.9504 1.0395 0.987588 1.06907 0 80.2991 0 0 0.120882 0.563852 2.16444 6.4177 0 0 0 t 0 0 0 43.9285 35.2575 3.4555 1.55318 1.61865 13.3458 0.42042 0.327971 6.11829 0 0 6.05923 3.74886 22.3658 42.3819 0 0 0

M08894_2.00_shift6 (KLF4)
; oligos_7nt_mkv5_m1 versus M08894_2.00 (KLF4); m=157/215; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.500003; ------rCCmCrCCCw----- ; cor=; Ncor= a 0 0 0 0 0 0 25 6.6 4.8 55.4 0 52.6 0.6 0.6 0.4 35.6 0 0 0 0 0 c 0 0 0 0 0 0 6.8 88.2 88.6 43.8 99.2 0.4 97.8 99.2 98.8 20.4 0 0 0 0 0 g 0 0 0 0 0 0 62.8 3.8 1.6 0.4 0.4 44.4 0.4 0 0 2 0 0 0 0 0 t 0 0 0 0 0 0 5.4 1.4 5 0.4 0.4 2.6 1.2 0.2 0.8 42 0 0 0 0 0

M00139_2.00_shift9 (M00139_2.00)
; oligos_7nt_mkv5_m1 versus M00139_2.00; m=158/215; ncol2=10; w=0; offset=3; strand=D; shift=9; score=0.49843; ---------cmwCCCCCmh-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 17.3942 26.206 44.9152 3.32464 2.67398 1.01422 1.97029 2.08507 36.1848 29.3413 0 0 c 0 0 0 0 0 0 0 0 0 56.0438 41.9294 5.39124 92.8851 95.9251 96.9428 95.4098 95.0881 40.3922 35.4809 0 0 g 0 0 0 0 0 0 0 0 0 13.0154 12.2557 15.4063 2.29645 0.721493 0.138639 0.801061 1.20298 5.63298 9.66968 0 0 t 0 0 0 0 0 0 0 0 0 13.5466 19.609 34.2873 1.49386 0.679476 1.90431 1.81881 1.62386 17.79 25.5081 0 0

M04530_2.00_shift2 (ZNF444)
; oligos_7nt_mkv5_m1 versus M04530_2.00 (ZNF444); m=159/215; ncol2=16; w=-4; offset=-4; strand=D; shift=2; score=0.497502; --ccrtCCCCCTCCCCCm--- ; cor=; Ncor= a 0 0 14.2547 10.0366 35.0522 21.7179 0.373886 0.461095 0.373778 0 0.78853 0.358372 0.387041 0.13002 0.628661 0.311791 0.45977 29.0635 0 0 0 c 0 0 44.11 65.1368 5.80812 13.4159 99.0653 99.3228 99.1518 99.812 98.7814 0.874427 98.9392 99.7544 98.6998 95.7058 98.9943 42.1769 0 0 0 g 0 0 21.5485 11.3731 56.9684 0.675169 0.345125 0.0432277 0 0 0.157706 0.0286697 0.0716743 0.0866802 0.171453 0 0.445402 9.19091 0 0 0 t 0 0 20.0868 13.4535 2.17126 64.191 0.215703 0.172911 0.474411 0.18797 0.272401 98.7385 0.602064 0.0288934 0.500071 3.98243 0.100575 19.5687 0 0 0

M04605_2.00_shift3 (SP1)
; oligos_7nt_mkv5_m1 versus M04605_2.00 (SP1); m=160/215; ncol2=15; w=-3; offset=-3; strand=D; shift=3; score=0.49734; ---ywrRCCACGCCCmCh--- ; cor=; Ncor= a 0 0 0 15.8388 55.3795 56.5615 27.8959 1.92315 0.107058 76.8869 0 1.88843 0 0.0161063 0 49.0866 2.36901 25.367 0 0 0 c 0 0 0 26.7261 3.67196 2.99495 0 97.665 96.6423 23.1131 99.9376 0 99.9658 99.9839 97.1322 48.1512 74.5634 31.4238 0 0 0 g 0 0 0 19.5135 1.95955 38.1259 71.8114 0.163928 0 0 0 96.4043 0 0 0 0.0298507 1.82186 6.12931 0 0 0 t 0 0 0 37.9216 38.989 2.31766 0.292655 0.247891 3.25067 0 0.0623855 1.70726 0.0342169 0 2.86784 2.73234 21.2458 37.0799 0 0 0

M04529_2.00_shift2 (ZNF444)
; oligos_7nt_mkv5_m1 versus M04529_2.00 (ZNF444); m=161/215; ncol2=16; w=-4; offset=-4; strand=D; shift=2; score=0.496259; --ccGTCCCCCTCCCCCm--- ; cor=; Ncor= a 0 0 18.4334 8.68599 21.0837 15.4828 0.210084 0.26866 0.175152 0.0233454 0.687886 0.418118 0.0700853 0.21028 0.0935126 0.287158 0.174948 26.0202 0 0 0 c 0 0 36.7144 67.4881 6.29233 11.9161 99.288 99.5211 99.5213 99.4631 99.1139 0.778165 99.5795 99.5794 99.6143 94.8771 99.4868 44.137 0 0 0 g 0 0 24.6717 10.7262 70.035 1.145 0.233427 0.093447 0 0.163418 0.0466364 0.139373 0 0.0350467 0.0935126 0.160809 0.0349895 7.24672 0 0 0 t 0 0 20.1806 13.0997 2.58903 71.4561 0.268441 0.116809 0.303596 0.350181 0.151568 98.6643 0.350426 0.175234 0.198714 4.67494 0.303242 22.5962 0 0 0

M00230_2.00_shift9 (EGR2)
; oligos_7nt_mkv5_m1 versus M00230_2.00 (EGR2); m=162/215; ncol2=10; w=0; offset=3; strand=D; shift=9; score=0.491383; ---------mcrCCCmccy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.4696 12.7214 30.8306 6.07116 0.756708 7.19322 39.7106 8.59421 16.1831 12.8811 0 0 c 0 0 0 0 0 0 0 0 0 37.5897 53.1588 7.45219 86.795 95.7003 69.626 41.7466 67.4299 63.6863 47.7397 0 0 g 0 0 0 0 0 0 0 0 0 12.5125 11.1706 43.7507 0.00921935 3.22593 2.41848 9.03963 6.49536 5.77749 10.1326 0 0 t 0 0 0 0 0 0 0 0 0 19.4283 22.9492 17.9665 7.12457 0.317024 20.7623 9.50311 17.4805 14.3531 29.2466 0 0

M01967_2.00_rc_shift6 (M01967_2.00_rc)
; oligos_7nt_mkv5_m1 versus M01967_2.00_rc; m=163/215; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.491291; ------wscsCGCsaw----- ; cor=; Ncor= a 0 0 0 0 0 0 34.7822 24.5367 22.145 0.623559 0 0.0420779 0 3.93797 41.5048 30.6595 0 0 0 0 0 c 0 0 0 0 0 0 17.2723 26.5803 52.858 60.2009 99.9657 0.0049014 83.1039 54.6344 20.8178 20.7583 0 0 0 0 0 g 0 0 0 0 0 0 22.1781 28.7941 23.9894 39.1613 0.000330411 99.6602 16.2825 31.8381 23.0073 18.2277 0 0 0 0 0 t 0 0 0 0 0 0 25.7673 20.0889 1.00764 0.0142313 0.0280106 0.292809 0.612682 9.58946 14.6701 30.3545 0 0 0 0 0

M02892_2.00_shift9 (ZNF740)
; oligos_7nt_mkv5_m1 versus M02892_2.00 (ZNF740); m=164/215; ncol2=10; w=0; offset=3; strand=D; shift=9; score=0.490248; ---------cCCCCCCCAc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 19.8051 2.29439 1.13194 1.38249 5.04422 0.612944 0.899119 1.61807 72.652 7.5187 0 0 c 0 0 0 0 0 0 0 0 0 57.0798 95.976 96.1797 96.3843 89.0599 98.035 97.7882 91.6568 7.02739 67.8055 0 0 g 0 0 0 0 0 0 0 0 0 16.0537 0.352983 1.04351 1.08118 2.86603 0.757166 0.143859 1.1967 7.08083 3.35411 0 0 t 0 0 0 0 0 0 0 0 0 7.06142 1.37663 1.64485 1.15207 3.02981 0.594916 1.16885 5.5284 13.2398 21.3217 0 0

M04455_2.00_shift5 (KLF2)
; oligos_7nt_mkv5_m1 versus M04455_2.00 (KLF2); m=165/215; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.48876; -----srCCmCrCCCw----- ; cor=; Ncor= a 0 0 0 0 0 22.804 40.76 11.9439 7.29676 56.6352 0 33.6164 0 2.58377 1.29796 39.7663 0 0 0 0 0 c 0 0 0 0 0 29.7707 17.9117 74.5003 83.6864 27.754 98.3404 5.41181 98.4871 93.2983 88.2229 24.7079 0 0 0 0 0 g 0 0 0 0 0 28.5591 34.2968 7.97872 3.36773 12.9886 0 57.6733 1.04411 3.93621 2.0042 8.41627 0 0 0 0 0 t 0 0 0 0 0 18.8663 7.0315 5.57705 5.6491 2.62223 1.65957 3.29844 0.468783 0.181671 8.4749 27.1095 0 0 0 0 0

M00232_2.00_shift7 (EGR2)
; oligos_7nt_mkv5_m1 versus M00232_2.00 (EGR2); m=166/215; ncol2=10; w=0; offset=1; strand=D; shift=7; score=0.486924; -------hymCGCCChw---- ; cor=; Ncor= a 0 0 0 0 0 0 0 26.4929 23.7216 41.6576 1.19466 19.711 0.023716 2.89133 2.95969 28.9816 30.3556 0 0 0 0 c 0 0 0 0 0 0 0 26.2293 30.1561 45.1271 88.9307 0.0573363 98.3364 95.7476 72.6087 25.7044 19.163 0 0 0 0 g 0 0 0 0 0 0 0 17.4071 11.7798 4.01277 0.0208137 73.0525 0.0101366 0.853607 0.0193529 12.6374 21.6062 0 0 0 0 t 0 0 0 0 0 0 0 29.8707 34.3426 9.20257 9.85381 7.17913 1.6297 0.507487 24.4122 32.6766 28.8752 0 0 0 0

M04555_2.00_shift6 (KLF11)
; oligos_7nt_mkv5_m1 versus M04555_2.00 (KLF11); m=167/215; ncol2=22; w=0; offset=0; strand=D; shift=6; score=0.484677; ------rmCACrCCCmcsmCA ; cor=; Ncor= a 0 0 0 0 0 0 27.2131 25.8017 6.88056 68.9189 1.2987 31.2951 0 0.0291206 0.144196 36.8329 8.86556 19.0608 27.4278 2.98854 85.545 c 0 0 0 0 0 0 20.3588 53.9309 80.6868 21.8115 97.317 0.794397 100 99.8981 77.2891 42.1551 64.4649 25.4047 48.3085 90.0928 11.6377 g 0 0 0 0 0 0 40.0904 8.20849 6.05339 7.13648 0.185529 59.9666 0 0.0728014 0.0240327 2.84339 5.29309 36.2258 6.16798 1.25546 2.09321 t 0 0 0 0 0 0 12.3378 12.0589 6.37925 2.13312 1.1988 7.94397 0 0 22.5427 18.1686 21.3765 19.3087 18.0957 5.66321 0.724065

M01172_2.00_shift11 (VEZF1)
; oligos_7nt_mkv5_m1 versus M01172_2.00 (VEZF1); m=168/215; ncol2=10; w=0; offset=5; strand=D; shift=11; score=0.48446; -----------CCCCCCmytw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 7.173 0.17421 0.427526 0.21282 0.666427 1.00267 40.685 4.47697 24.049 33.3261 c 0 0 0 0 0 0 0 0 0 0 0 79.0692 99.7338 99.5102 99.7526 98.9066 97.7743 35.7253 55.0887 17.1174 17.3977 g 0 0 0 0 0 0 0 0 0 0 0 13.7402 0.0839533 0.0167436 0.0014197 0.00207909 0.333758 11.088 7.02128 21.1173 15.2769 t 0 0 0 0 0 0 0 0 0 0 0 0.0176032 0 0.0455138 0.0331303 0.424933 0.889284 12.5016 33.413 37.7163 33.9993

M08287_2.00_shift7 (PATZ1)
; oligos_7nt_mkv5_m1 versus M08287_2.00 (PATZ1); m=169/215; ncol2=8; w=0; offset=1; strand=D; shift=7; score=0.484298; -------CCCCkCCC------ ; cor=; Ncor= a 0 0 0 0 0 0 0 0 7.7333 0 0 22.1333 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 94.1333 81.0667 100 100 0 100 100 84 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 35.2 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 5.8667 11.2 0 0 42.6667 0 0 16 0 0 0 0 0 0

M04411_2.00_shift6 (KLF5)
; oligos_7nt_mkv5_m1 versus M04411_2.00 (KLF5); m=170/215; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.48417; ------gmCACrCCcw----- ; cor=; Ncor= a 0 0 0 0 0 0 24.8178 32.3229 3.91576 68.5657 0 26.6089 5.11935 11.351 6.89405 31.3047 0 0 0 0 0 c 0 0 0 0 0 0 16.691 52.5827 90.2929 13.4433 96.1121 0.585069 86.1809 80.07 66.3764 21.7566 0 0 0 0 0 g 0 0 0 0 0 0 43.7682 5.62945 1.54656 8.9955 0 64.2172 1.60176 5.31077 3.9671 10.605 0 0 0 0 0 t 0 0 0 0 0 0 14.723 9.46489 4.24482 8.9955 3.88792 8.58881 7.09799 3.26816 22.7625 36.3338 0 0 0 0 0

M07941_2.00_rc_shift5 (E2F6_rc)
; oligos_7nt_mkv5_m1 versus M07941_2.00_rc (E2F6_rc); m=171/215; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.483909; -----yyTCCCGCccc----- ; cor=; Ncor= a 0 0 0 0 0 8.59379 0 0 0.7812 0 0.3906 7.03121 0 0 19.1406 22.2656 0 0 0 0 0 c 0 0 0 0 0 39.8438 35.5469 0 99.2188 100 99.6094 0 100 63.6719 51.5626 35.1562 0 0 0 0 0 g 0 0 0 0 0 14.4531 0 0 0 0 0 84.7657 0 22.6562 7.03121 21.875 0 0 0 0 0 t 0 0 0 0 0 37.1094 64.4531 100 0 0 0 8.20311 0 13.6719 22.2656 20.7031 0 0 0 0 0

M00135_2.00_shift10 (M00135_2.00)
; oligos_7nt_mkv5_m1 versus M00135_2.00; m=172/215; ncol2=10; w=0; offset=4; strand=D; shift=10; score=0.482905; ----------mgmCCCCcww- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 34.2572 8.19755 37.9693 0.923364 0.131831 14.6301 2.6438 18.9683 31.1332 30.6138 0 c 0 0 0 0 0 0 0 0 0 0 26.9477 5.33258 58.3686 98.5209 99.8597 83.3526 79.2191 45.2756 21.9392 20.7273 0 g 0 0 0 0 0 0 0 0 0 0 20.3666 63.0441 0.004593 0.00680749 0.00406137 0.0174761 2.14302 12.5883 20.6616 20.1147 0 t 0 0 0 0 0 0 0 0 0 0 18.4285 23.4257 3.65749 0.548959 0 1.99986 15.9941 23.1679 26.266 28.5441 0

M00617_2.00_shift7 (M00617_2.00)
; oligos_7nt_mkv5_m1 versus M00617_2.00; m=173/215; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.482499; -------ccmCGCCCw----- ; cor=; Ncor= a 0 0 0 0 0 0 0 23.489 19.4417 52.2892 0.827505 19.3067 3.00723e-10 0.283087 0.101233 35.4676 0 0 0 0 0 c 0 0 0 0 0 0 0 38.3414 47.819 36.118 98.5594 3.09116e-07 99.9999 99.2854 80.6139 23.3039 0 0 0 0 0 g 0 0 0 0 0 0 0 14.6807 9.46331 5.97026 6.91425e-05 72.9993 3.40174e-19 0.430847 0.375188 8.48772 0 0 0 0 0 t 0 0 0 0 0 0 0 23.489 23.276 5.62258 0.61303 7.69407 0 0 18.9096 32.7408 0 0 0 0 0

M02891_2.00_shift9 (ZNF740)
; oligos_7nt_mkv5_m1 versus M02891_2.00 (ZNF740); m=174/215; ncol2=10; w=0; offset=3; strand=D; shift=9; score=0.478965; ---------mCCCCCCCAc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 27.3826 7.78087 6.20484 0.948509 0.902527 0.361991 2.33996 4.5264 68.0266 12.4568 0 0 c 0 0 0 0 0 0 0 0 0 46.2576 85.391 91.4152 97.1545 97.0668 97.3303 94.9669 90.1509 18.5642 61.8815 0 0 g 0 0 0 0 0 0 0 0 0 17.7592 1.07185 0.297493 0.361337 0.541516 0.950226 1.6777 0.963956 3.60531 5.29344 0 0 t 0 0 0 0 0 0 0 0 0 8.60065 5.75625 2.08245 1.53568 1.48917 1.35747 1.01545 4.35876 9.80392 20.3682 0 0

M08866_2.00_shift8 (SALL4)
; oligos_7nt_mkv5_m1 versus M08866_2.00 (SALL4); m=175/215; ncol2=10; w=0; offset=2; strand=D; shift=8; score=0.477905; --------CcCwCCChsc--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 4.4 22.6 0.4 58.6 1.4 1.2 1.4 29 13 16.8 0 0 0 c 0 0 0 0 0 0 0 0 81.4 66 98.8 1 80.4 98.2 97.2 34.4 47.8 51.4 0 0 0 g 0 0 0 0 0 0 0 0 2.4 1.6 0.2 3 16.2 0.4 0.2 0.6 25.8 13.8 0 0 0 t 0 0 0 0 0 0 0 0 11.8 9.8 0.6 37.4 2 0.2 1.2 36 13.4 18 0 0 0

M08979_2.00_shift8 (M08979_2.00)
; oligos_7nt_mkv5_m1 versus M08979_2.00; m=176/215; ncol2=10; w=0; offset=2; strand=D; shift=8; score=0.477905; --------CcCwCCChsc--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 4.4 22.6 0.4 58.6 1.4 1.2 1.4 29 13 16.8 0 0 0 c 0 0 0 0 0 0 0 0 81.4 66 98.8 1 80.4 98.2 97.2 34.4 47.8 51.4 0 0 0 g 0 0 0 0 0 0 0 0 2.4 1.6 0.2 3 16.2 0.4 0.2 0.6 25.8 13.8 0 0 0 t 0 0 0 0 0 0 0 0 11.8 9.8 0.6 37.4 2 0.2 1.2 36 13.4 18 0 0 0

M07940_2.00_rc_shift5 (E2F6_rc)
; oligos_7nt_mkv5_m1 versus M07940_2.00_rc (E2F6_rc); m=177/215; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.477813; -----yyTCCCGCccc----- ; cor=; Ncor= a 0 0 0 0 0 3.8314 0 0 0 0 0 4.2146 0 0 15.7088 18.3908 0 0 0 0 0 c 0 0 0 0 0 36.7816 37.1648 0 100 100 90.0383 0 100 62.0689 47.5096 32.9502 0 0 0 0 0 g 0 0 0 0 0 18.3908 2.2989 0 0 0 0 83.1417 0 20.6897 12.2605 24.5211 0 0 0 0 0 t 0 0 0 0 0 40.9962 60.5363 100 0 0 9.9617 12.6437 0 17.2414 24.5211 24.1379 0 0 0 0 0

M00622_2.00_shift10 (M00622_2.00)
; oligos_7nt_mkv5_m1 versus M00622_2.00; m=178/215; ncol2=8; w=0; offset=4; strand=D; shift=10; score=0.476552; ----------CgCCCmCg--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 4.20133 13.3489 0.0302663 0.0302663 0.0302663 57.5363 0.0302663 16.6805 0 0 0 c 0 0 0 0 0 0 0 0 0 0 91.5557 23.3356 99.9092 99.9092 96.8826 33.3232 99.9092 8.36106 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0.0415973 56.6245 0.0302663 0.0302663 0.0302663 9.11017 0.0302663 66.5973 0 0 0 t 0 0 0 0 0 0 0 0 0 0 4.20133 6.69108 0.0302663 0.0302663 3.0569 0.0302663 0.0302663 8.36106 0 0 0

M10137_2.00_shift4 (PATZ1)
; oligos_7nt_mkv5_m1 versus M10137_2.00 (PATZ1); m=179/215; ncol2=13; w=-2; offset=-2; strand=D; shift=4; score=0.475507; ----kgkCCCCCCCCsh---- ; cor=; Ncor= a 0 0 0 0 12.8205 15.3846 17.9487 0 0 0 0 10.2564 0 5.12821 2.5641 0 26.1905 0 0 0 0 c 0 0 0 0 15.3846 10.2564 0 100 100 97.4359 100 74.359 92.5 89.7436 71.7949 55.2632 33.3333 0 0 0 0 g 0 0 0 0 28.2051 51.2821 51.2821 0 0 0 0 0 0 0 10.2564 31.5789 11.9048 0 0 0 0 t 0 0 0 0 43.5897 23.0769 30.7692 0 0 2.5641 0 15.3846 7.5 5.12821 15.3846 13.1579 28.5714 0 0 0 0

M04463_2.00_shift5 (KLF4)
; oligos_7nt_mkv5_m1 versus M04463_2.00 (KLF4); m=180/215; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.475036; -----srCCACrCCCh----- ; cor=; Ncor= a 0 0 0 0 0 19.0879 35.9409 12.4731 12.5032 70.7975 0.981144 36.0936 0 3.2263 0.720669 41.0845 0 0 0 0 0 c 0 0 0 0 0 35.5446 22.9869 71.0434 80.0077 19.148 96.1367 0.575309 99.5713 95.8869 90.3863 26.7783 0 0 0 0 0 g 0 0 0 0 0 27.6351 32.6696 8.50799 3.61061 6.79862 0 59.1436 0 0.366972 2.23407 6.79426 0 0 0 0 0 t 0 0 0 0 0 17.7324 8.40263 7.97553 3.87854 3.25588 2.88211 4.18749 0.428708 0.519878 6.65898 25.3429 0 0 0 0 0

M09043_2.00_rc_shift4 (M09043_2.00_rc)
; oligos_7nt_mkv5_m1 versus M09043_2.00_rc; m=181/215; ncol2=12; w=-2; offset=-2; strand=R; shift=4; score=0.474071; ----cyyTCCCGCCmm----- ; cor=; Ncor= a 0 0 0 0 10.7682 5.02773 0.606722 0.199908 1.0347 0.805946 2.3994 2.4233 0.623281 1.47737 27.3399 31.4089 0 0 0 0 0 c 0 0 0 0 48.3293 51.9152 35.8988 18.67 96.9688 91.8483 88.9192 0.223295 94.011 71.9488 46.0562 29.6425 0 0 0 0 0 g 0 0 0 0 22.2715 17.0811 5.2133 0.31514 0.968297 6.48752 2.89362 85.7663 2.82431 11.8017 6.42487 16.8228 0 0 0 0 0 t 0 0 0 0 18.631 25.976 58.2812 80.8149 1.02822 0.858185 5.78776 11.5871 2.54144 14.7722 20.179 22.1259 0 0 0 0 0

M08021_2.00_shift5 (M08021_2.00)
; oligos_7nt_mkv5_m1 versus M08021_2.00; m=182/215; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.473847; -----rrCCmCrCCCw----- ; cor=; Ncor= a 0 0 0 0 0 27.5748 27.2425 4.6512 3.6545 45.515 0 52.4917 0 0 0 39.5349 0 0 0 0 0 c 0 0 0 0 0 21.2625 6.9767 87.3754 86.7109 49.5017 100 0 100 100 98.6711 19.6013 0 0 0 0 0 g 0 0 0 0 0 39.5349 56.1462 2.3256 0 0.996699 0 36.8771 0 0 0 2.6578 0 0 0 0 0 t 0 0 0 0 0 11.6279 9.6346 5.6478 9.63459 3.9867 0 10.6312 0 0 1.3289 38.206 0 0 0 0 0

M00224_2.00_shift8 (KLF1)
; oligos_7nt_mkv5_m1 versus M00224_2.00 (KLF1); m=183/215; ncol2=8; w=0; offset=2; strand=D; shift=8; score=0.47273; --------ymCGCCCh----- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.124378 33.2965 0.110619 0.110619 0.110619 0.110619 0.110619 28.5511 0 0 0 0 0 c 0 0 0 0 0 0 0 0 49.8756 66.4823 99.6681 0.110619 99.6681 99.6681 99.6681 42.7557 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0.124378 0.110619 0.110619 99.6681 0.110619 0.110619 0.110619 0.142045 0 0 0 0 0 t 0 0 0 0 0 0 0 0 49.8756 0.110619 0.110619 0.110619 0.110619 0.110619 0.110619 28.5511 0 0 0 0 0

M07939_2.00_rc_shift5 (E2F6_rc)
; oligos_7nt_mkv5_m1 versus M07939_2.00_rc (E2F6_rc); m=184/215; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.472451; -----yyTCCCGCcyy----- ; cor=; Ncor= a 0 0 0 0 0 9.7902 0 0 0 0 1.3986 3.4965 0 0 15.3846 19.5804 0 0 0 0 0 c 0 0 0 0 0 34.2657 33.2168 0 97.9021 100 98.6014 0 100 65.035 47.9021 29.021 0 0 0 0 0 g 0 0 0 0 0 20.6294 0 0 2.0979 0 0 82.5175 0 18.8811 8.3916 22.7273 0 0 0 0 0 t 0 0 0 0 0 35.3147 66.7832 100 0 0 0 13.986 0 16.0839 28.3217 28.6713 0 0 0 0 0

M00784_2.00_shift10 (M00784_2.00)
; oligos_7nt_mkv5_m1 versus M00784_2.00; m=185/215; ncol2=10; w=0; offset=4; strand=D; shift=10; score=0.471884; ----------cCCCCCCayw- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 17.3335 21.1796 0.0178463 0.803491 0.0177459 2.56885 12.8322 46.6398 19.5656 28.8778 0 c 0 0 0 0 0 0 0 0 0 0 64.2411 73.1883 99.8869 96.661 98.3368 95.9145 75.336 24.84 35.2961 21.6082 0 g 0 0 0 0 0 0 0 0 0 0 11.1634 0.0305936 0.0610562 0.072891 0.110626 0.0783521 1.32572 14.3314 12.2285 22.0447 0 t 0 0 0 0 0 0 0 0 0 0 7.26191 5.60151 0.0341852 2.46258 1.5348 1.43829 10.5061 14.1888 32.9098 27.4694 0

M00143_2.00_shift10 (M00143_2.00)
; oligos_7nt_mkv5_m1 versus M00143_2.00; m=186/215; ncol2=10; w=0; offset=4; strand=D; shift=10; score=0.471269; ----------ccCCCCCayk- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 23.4762 22.5596 3.46737 4.55575 4.44789 11.7815 6.04568 40.4091 24.0527 23.464 0 c 0 0 0 0 0 0 0 0 0 0 48.715 67.0984 90.3233 89.6927 84.1356 86.1883 87.2994 15.0151 29.9716 24.915 0 g 0 0 0 0 0 0 0 0 0 0 10.7616 2.68092 2.81059 0.0747497 2.18678 0.285514 0.548452 20.0665 17.4659 26.4556 0 t 0 0 0 0 0 0 0 0 0 0 17.0472 7.66113 3.39871 5.67681 9.22973 1.74462 6.10644 24.5093 28.5098 25.1654 0

M09038_2.00_rc_shift5 (M09038_2.00_rc)
; oligos_7nt_mkv5_m1 versus M09038_2.00_rc; m=187/215; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.471112; -----syTCCCGCsc------ ; cor=; Ncor= a 0 0 0 0 0 5.62249 0.200803 0.401606 0.200803 0.803213 0.401606 0.803213 1.60643 0.200803 13.0522 0 0 0 0 0 0 c 0 0 0 0 0 47.1888 47.1888 0.803213 92.1687 96.1847 94.5783 0 95.3815 61.8474 57.0281 0 0 0 0 0 0 g 0 0 0 0 0 26.3052 8.43373 0.401606 1.00402 2.61044 3.01205 91.7671 2.40964 25.7028 11.245 0 0 0 0 0 0 t 0 0 0 0 0 20.8835 44.1767 98.3936 6.62651 0.401606 2.00803 7.42972 0.60241 12.249 18.6747 0 0 0 0 0 0

M09033_2.00_rc_shift3 (E2F7_rc)
; oligos_7nt_mkv5_m1 versus M09033_2.00_rc (E2F7_rc); m=188/215; ncol2=13; w=-3; offset=-3; strand=R; shift=3; score=0.468931; ---yyttYCCCGCCyc----- ; cor=; Ncor= a 0 0 0 10.2 21.4 15.6 1.8 0.6 1.4 0.8 3 5.8 1 0.4 21.4 12.6 0 0 0 0 0 c 0 0 0 48.6 35.6 22.4 24 27.6 77.6 95.8 81.4 0.4 94.2 77.2 41.6 53 0 0 0 0 0 g 0 0 0 15.2 8.6 19.2 13.8 0.4 0.6 1.2 1.6 85.4 0.4 8.2 3.2 14.8 0 0 0 0 0 t 0 0 0 26 34.4 42.8 60.4 71.4 20.4 2.2 14 8.4 4.4 14.2 33.8 19.6 0 0 0 0 0

M09040_2.00_rc_shift3 (M09040_2.00_rc)
; oligos_7nt_mkv5_m1 versus M09040_2.00_rc; m=189/215; ncol2=13; w=-3; offset=-3; strand=R; shift=3; score=0.468931; ---yyttYCCCGCCyc----- ; cor=; Ncor= a 0 0 0 10.2 21.4 15.6 1.8 0.6 1.4 0.8 3 5.8 1 0.4 21.4 12.6 0 0 0 0 0 c 0 0 0 48.6 35.6 22.4 24 27.6 77.6 95.8 81.4 0.4 94.2 77.2 41.6 53 0 0 0 0 0 g 0 0 0 15.2 8.6 19.2 13.8 0.4 0.6 1.2 1.6 85.4 0.4 8.2 3.2 14.8 0 0 0 0 0 t 0 0 0 26 34.4 42.8 60.4 71.4 20.4 2.2 14 8.4 4.4 14.2 33.8 19.6 0 0 0 0 0

M00226_2.00_shift8 (KLF1)
; oligos_7nt_mkv5_m1 versus M00226_2.00 (KLF1); m=190/215; ncol2=8; w=0; offset=2; strand=D; shift=8; score=0.46775; --------CmCGCCCm----- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 8.36106 40.6055 0.0302663 21.2167 0.0302663 0.0302663 0.0302663 52.1267 0 0 0 0 0 c 0 0 0 0 0 0 0 0 74.9168 59.3321 96.8826 3.0569 99.9092 99.9092 99.9092 30.4253 0 0 0 0 0 g 0 0 0 0 0 0 0 0 4.20133 0.031211 3.0569 75.6961 0.0302663 0.0302663 0.0302663 4.38368 0 0 0 0 0 t 0 0 0 0 0 0 0 0 12.5208 0.031211 0.0302663 0.0302663 0.0302663 0.0302663 0.0302663 13.0642 0 0 0 0 0

M00231_2.00_shift12 (EGR2)
; oligos_7nt_mkv5_m1 versus M00231_2.00 (EGR2); m=191/215; ncol2=8; w=0; offset=6; strand=D; shift=12; score=0.46664; ------------mCCmCGCa- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 36.8338 0.0120424 0.0120424 43.3646 0.0120424 10.9824 0.013151 49.0734 0 c 0 0 0 0 0 0 0 0 0 0 0 0 56.1185 99.9639 99.9639 56.6113 98.7596 2.45002 93.3851 10.9193 0 g 0 0 0 0 0 0 0 0 0 0 0 0 1.77069 0.0120424 0.0120424 0.0120424 1.21628 84.1175 0.013151 21.8205 0 t 0 0 0 0 0 0 0 0 0 0 0 0 5.277 0.0120424 0.0120424 0.0120424 0.0120424 2.45002 6.58864 18.1868 0

M04400_2.00_shift5 (KLF6)
; oligos_7nt_mkv5_m1 versus M04400_2.00 (KLF6); m=192/215; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.457865; -----srcCACRCCCm----- ; cor=; Ncor= a 0 0 0 0 0 20.2099 36.7282 17.18 14.1084 84.4376 0 31.8408 0 1.09794 3.03549 43.5675 0 0 0 0 0 c 0 0 0 0 0 28.4672 17.3882 66.1836 71.5872 10.9399 98.917 0 100 96.267 93.7153 30.3376 0 0 0 0 0 g 0 0 0 0 0 28.5584 41.0575 10.0242 9.7322 2.31125 0 68.1592 0 2.63505 0.51304 2.37226 0 0 0 0 0 t 0 0 0 0 0 22.7646 4.82612 6.61232 4.57218 2.31125 1.08303 0 0 0 2.73621 23.7226 0 0 0 0 0

M05849_2.00_shift5 (ZNF282)
; oligos_7nt_mkv5_m1 versus M05849_2.00 (ZNF282); m=193/215; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.453495; -----cmTCCCaCACC----- ; cor=; Ncor= a 0 0 0 0 0 18.8119 44.5545 9.901 8.9109 0 0 54.4554 0 69.3069 0 13.8614 0 0 0 0 0 c 0 0 0 0 0 45.5446 41.5842 1.9802 90.099 100 99.0099 6.9307 96.0396 24.7525 100 77.2277 0 0 0 0 0 g 0 0 0 0 0 10.8911 3.9604 4.9505 0.9901 0 0.9901 24.7525 3.9604 2.9703 0 0 0 0 0 0 0 t 0 0 0 0 0 24.7525 9.901 83.1683 0 0 0 13.8614 0 2.9703 0 8.9109 0 0 0 0 0

M06170_2.00_shift5 (M06170_2.00)
; oligos_7nt_mkv5_m1 versus M06170_2.00; m=194/215; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.45164; -----rrCCACrCCCa----- ; cor=; Ncor= a 0 0 0 0 0 29.3362 38.3282 10.202 8.68687 76.7677 2.72727 33.0303 3.13131 3.13131 2.42669 50.1523 0 0 0 0 0 c 0 0 0 0 0 13.4904 2.95617 78.8889 82.6263 21.4141 97.0707 0 96.8687 96.6667 93.1244 20.3046 0 0 0 0 0 g 0 0 0 0 0 45.5032 51.2742 4.54545 1.81818 1.51515 0 65.0505 0 0 0 5.27919 0 0 0 0 0 t 0 0 0 0 0 11.6702 7.44139 6.36364 6.86869 0.30303 0.20202 1.91919 0 0.20202 4.44894 24.264 0 0 0 0 0

M04418_2.00_shift5 (KLF3)
; oligos_7nt_mkv5_m1 versus M04418_2.00 (KLF3); m=195/215; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.451343; -----grCCrCGCCCw----- ; cor=; Ncor= a 0 0 0 0 0 17.8391 56.193 3.04476 0.675125 60.2825 4.81576 8.65443 0.464453 0.191372 0.172638 39.3652 0 0 0 0 0 c 0 0 0 0 0 6.13745 1.39513 91.3408 98.0041 1.59284 92.1384 0.680938 99.4643 99.7418 96.9889 23.3454 0 0 0 0 0 g 0 0 0 0 0 61.4161 41.9423 4.12584 0.561849 37.1806 0.0447284 88.1937 0.0712775 0.066865 0.107618 3.49985 0 0 0 0 0 t 0 0 0 0 0 14.6074 0.469579 1.4886 0.758949 0.943991 3.00106 2.47095 0 0 2.73082 33.7895 0 0 0 0 0

M09031_2.00_rc_shift5 (E2F3_rc)
; oligos_7nt_mkv5_m1 versus M09031_2.00_rc (E2F3_rc); m=196/215; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.451278; -----yTTCCCGCchw----- ; cor=; Ncor= a 0 0 0 0 0 10.6 2.6 1 1.4 1.6 16 8.6 0.4 7.4 28.2 27.6 0 0 0 0 0 c 0 0 0 0 0 25 20 11.8 95.8 86.8 68.4 2 95.6 67.6 41 20.8 0 0 0 0 0 g 0 0 0 0 0 11 6.2 3.8 1 2 0.4 77 0.6 12.4 4.6 14 0 0 0 0 0 t 0 0 0 0 0 53.4 71.2 83.4 1.8 9.6 15.2 12.4 3.4 12.6 26.2 37.6 0 0 0 0 0

M04401_2.00_shift5 (KLF6)
; oligos_7nt_mkv5_m1 versus M04401_2.00 (KLF6); m=197/215; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.448253; -----yRCCACGCCCh----- ; cor=; Ncor= a 0 0 0 0 0 16.1856 25.313 3.89228 0.376832 78.7906 0 19.1863 0 0 0.255587 32.9455 0 0 0 0 0 c 0 0 0 0 0 29.9023 0.915282 94.0248 93.559 4.83662 99.8808 0 100 100 87.8629 25.1809 0 0 0 0 0 g 0 0 0 0 0 21.444 72.8637 0.785469 5.94557 16.3728 0.119198 80.8137 0 0 0.327675 12.0459 0 0 0 0 0 t 0 0 0 0 0 32.4681 0.907959 1.29743 0.118632 0 0 0 0 0 11.5538 29.8277 0 0 0 0 0

M06163_2.00_shift5 (M06163_2.00)
; oligos_7nt_mkv5_m1 versus M06163_2.00; m=198/215; ncol2=10; w=-1; offset=-1; strand=D; shift=5; score=0.447515; -----rrchmCRCCC------ ; cor=; Ncor= a 0 0 0 0 0 35.7143 37.5 18.75 37.5 62.5 0 31.25 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 12.5 62.5 31.25 37.5 100 0 100 100 100 0 0 0 0 0 0 g 0 0 0 0 0 64.2857 43.75 12.5 0 0 0 68.75 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 6.25 6.25 31.25 0 0 0 0 0 0 0 0 0 0 0 0

M09505_2.00_shift12 (MAZ)
; oligos_7nt_mkv5_m1 versus M09505_2.00 (MAZ); m=199/215; ncol2=8; w=0; offset=6; strand=D; shift=12; score=0.446547; ------------CCCCcCCC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0.1 0.1 0.1 5.4 8.4 0.1 0.1 0 c 0 0 0 0 0 0 0 0 0 0 0 0 99.7 95.6 89.4 84.8 60.7 70.2 99.7 98.9 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0.1 5.8 6.1 14.9 8.2 0.1 0.1 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0.1 4.2 4.7 9 19 13.2 0.1 0.9 0

M04419_2.00_shift5 (KLF3)
; oligos_7nt_mkv5_m1 versus M04419_2.00 (KLF3); m=200/215; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.446542; -----grCCACGCCCw----- ; cor=; Ncor= a 0 0 0 0 0 15.9938 47.08 3.29544 1.0131 76.5579 13.8831 6.9486 0.709143 0.996102 0.88967 38.8752 0 0 0 0 0 c 0 0 0 0 0 8.49124 2.77719 91.1855 96.5735 3.99882 84.6798 3.09459 98.5601 98.5654 96.9954 22.0684 0 0 0 0 0 g 0 0 0 0 0 60.2076 49.233 4.14183 0.896409 17.282 0.088368 86.4161 0.357278 0.438502 0.559374 11.902 0 0 0 0 0 t 0 0 0 0 0 15.3073 0.90986 1.37727 1.517 2.1613 1.34877 3.54075 0.373518 0 1.55559 27.1544 0 0 0 0 0

M07587_2.00_shift6 (ZNF304)
; oligos_7nt_mkv5_m1 versus M07587_2.00 (ZNF304); m=201/215; ncol2=24; w=0; offset=0; strand=D; shift=6; score=0.443189; ------cccCckCCCCrstCs ; cor=; Ncor= a 0 0 0 0 0 0 11.1213 13.6949 6.34191 7.8125 11.489 10.7537 0.0919118 0.827206 14.0625 0.0919118 52.6654 20.6801 5.23897 0.0919118 2.66544 c 0 0 0 0 0 0 51.1949 50.4596 67.0037 86.8566 51.1949 0.827206 96.4154 98.2537 77.6654 99.7243 4.87132 36.489 18.4743 94.2096 29.8713 g 0 0 0 0 0 0 17.0037 15.1654 12.9596 3.76838 14.0625 43.1066 3.40074 0.0919118 3.76838 0.0919118 39.7978 40.9007 8.91544 0.0919118 51.1949 t 0 0 0 0 0 0 20.6801 20.6801 13.6949 1.5625 23.2537 45.3125 0.0919118 0.827206 4.50368 0.0919118 2.66544 1.93015 67.3713 5.60662 16.2684

M08387_2.00_shift7 (ZBTB14)
; oligos_7nt_mkv5_m1 versus M08387_2.00 (ZBTB14); m=202/215; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.437609; -------sCGCGCsCc----- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 12.6972 0.0788644 12.3817 0 0 0 0 0 c 0 0 0 0 0 0 0 36.6719 99.7634 0.0788644 99.7634 0.0788644 99.7634 37.6183 99.7634 57.1767 0 0 0 0 0 g 0 0 0 0 0 0 0 57.4921 0.0788644 99.7634 0.0788644 99.7634 0.0788644 49.6057 0.0788644 20.2681 0 0 0 0 0 t 0 0 0 0 0 0 0 5.7571 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 10.1735 0 0 0 0 0

M09034_2.00_rc_shift3 (E2F6_rc)
; oligos_7nt_mkv5_m1 versus M09034_2.00_rc (E2F6_rc); m=203/215; ncol2=13; w=-3; offset=-3; strand=R; shift=3; score= 0.4367; ---yyyyTCCCGCCyy----- ; cor=; Ncor= a 0 0 0 13.6 12.6 7 1.6 1.2 1.2 3.2 4.8 6.6 1 2 14.8 17.2 0 0 0 0 0 c 0 0 0 42.6 37.8 43.8 43.6 1.4 87.2 89.6 89.4 1.2 96.4 70 55.6 34.2 0 0 0 0 0 g 0 0 0 16.2 21.8 10.8 3.6 3.2 4.4 4.8 1.8 70.8 1.6 12.6 3.4 14.8 0 0 0 0 0 t 0 0 0 27.6 27.8 38.4 51.2 94.2 7.2 2.4 4 21.4 1 15.4 26.2 33.8 0 0 0 0 0

M08900_2.00_shift7 (ZIC1)
; oligos_7nt_mkv5_m1 versus M08900_2.00 (ZIC1); m=204/215; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.435253; -------smCCwCCCm----- ; cor=; Ncor= a 0 0 0 0 0 0 0 6.59609 61.2378 0 11.7264 49.5114 0 2.9316 0 30.1303 0 0 0 0 0 c 0 0 0 0 0 0 0 27.443 26.7101 70.684 76.5472 17.5896 94.1368 94.1368 85.342 51.9544 0 0 0 0 0 g 0 0 0 0 0 0 0 44.3811 8.79479 23.4528 0 2.9316 5.86319 2.9316 5.86319 13.1922 0 0 0 0 0 t 0 0 0 0 0 0 0 21.5798 3.25733 5.86319 11.7264 29.9674 0 0 8.79479 4.72313 0 0 0 0 0

M08990_2.00_shift7 (M08990_2.00)
; oligos_7nt_mkv5_m1 versus M08990_2.00; m=205/215; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.435253; -------smCCwCCCm----- ; cor=; Ncor= a 0 0 0 0 0 0 0 6.59609 61.2378 0 11.7264 49.5114 0 2.9316 0 30.1303 0 0 0 0 0 c 0 0 0 0 0 0 0 27.443 26.7101 70.684 76.5472 17.5896 94.1368 94.1368 85.342 51.9544 0 0 0 0 0 g 0 0 0 0 0 0 0 44.3811 8.79479 23.4528 0 2.9316 5.86319 2.9316 5.86319 13.1922 0 0 0 0 0 t 0 0 0 0 0 0 0 21.5798 3.25733 5.86319 11.7264 29.9674 0 0 8.79479 4.72313 0 0 0 0 0

M08361_2.00_shift9 (ZSCAN22)
; oligos_7nt_mkv5_m1 versus M08361_2.00 (ZSCAN22); m=206/215; ncol2=18; w=0; offset=3; strand=D; shift=9; score=0.431501; ---------cyGCCTCCkCCm ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 10.4947 19.5856 7.01872 2.20588 1.40374 2.20588 0.0668449 0.0668449 7.82086 0.0668449 0.601604 38.3021 c 0 0 0 0 0 0 0 0 0 47.1257 30.8155 6.21658 85.8957 93.6497 3.81016 99.2647 87.7674 13.4358 97.1257 90.1738 41.2433 g 0 0 0 0 0 0 0 0 0 24.3984 24.3984 76.5374 2.74064 0.601604 21.7246 0.601604 0.601604 40.9759 0.0668449 2.20588 16.1096 t 0 0 0 0 0 0 0 0 0 17.9813 25.2005 10.2273 9.15775 4.34492 72.2594 0.0668449 11.5642 37.7674 2.74064 7.01872 4.34492

M08109_2.00_rc_shift4 (E2F4_rc)
; oligos_7nt_mkv5_m1 versus M08109_2.00_rc (E2F4_rc); m=207/215; ncol2=11; w=-2; offset=-2; strand=R; shift=4; score=0.430415; ----yyyTCCCGCsc------ ; cor=; Ncor= a 0 0 0 0 19.4888 5.16507 0 0 0 0 0 0 0 0 20.6603 0 0 0 0 0 0 c 0 0 0 0 32.8009 38.3387 33.2801 3.99361 97.0181 86.9542 100 0 99.4143 64.59 45.1544 0 0 0 0 0 0 g 0 0 0 0 20.9265 18.5836 0 0 2.18317 11.6081 0 100 0.585729 27.1565 19.7018 0 0 0 0 0 0 t 0 0 0 0 26.7838 37.9127 66.7199 96.0064 0.798722 1.4377 0 0 0 8.25346 14.4835 0 0 0 0 0 0

M01917_2.00_rc_shift11 (M01917_2.00_rc)
; oligos_7nt_mkv5_m1 versus M01917_2.00_rc; m=208/215; ncol2=8; w=0; offset=5; strand=R; shift=11; score=0.428088; -----------tCCCCCCc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 10.8757 6.35513 3.18153 0.801333 3.97493 2.38813 7.38283 7.34593 0 0 c 0 0 0 0 0 0 0 0 0 0 0 23.9135 78.5544 81.728 97.596 93.629 87.2818 68.0187 62.3716 0 0 g 0 0 0 0 0 0 0 0 0 0 0 17.3946 7.94192 8.73532 1.59473 2.38813 8.73532 20.4933 17.434 0 0 t 0 0 0 0 0 0 0 0 0 0 0 47.8162 7.14852 6.35513 0.00793399 0.00793399 1.59473 4.10521 12.8485 0 0

M08107_2.00_rc_shift4 (E2F6_rc)
; oligos_7nt_mkv5_m1 versus M08107_2.00_rc (E2F6_rc); m=209/215; ncol2=11; w=-2; offset=-2; strand=R; shift=4; score=0.426314; ----byyTCCCGCCy------ ; cor=; Ncor= a 0 0 0 0 13.4567 6.52884 0 0 0 0 0 4.75154 0 0 16.6485 0 0 0 0 0 0 c 0 0 0 0 32.9706 41.1679 38.8466 0 98.2227 100 99.7461 0 100 69.2419 50.9975 0 0 0 0 0 0 g 0 0 0 0 25.6075 16.4672 0 0 1.05187 0 0 70.8741 0 14.7262 2.9017 0 0 0 0 0 0 t 0 0 0 0 27.9652 35.8361 61.1534 100 0.725426 0 0.253899 24.3743 0 16.0319 29.4523 0 0 0 0 0 0

M08991_2.00_shift9 (M08991_2.00)
; oligos_7nt_mkv5_m1 versus M08991_2.00; m=210/215; ncol2=9; w=0; offset=3; strand=D; shift=9; score=0.42164; ---------rmGmCCCyc--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 26 47.2 0.8 58.4 0.2 0 4.4 0.6 10.6 0 0 0 c 0 0 0 0 0 0 0 0 0 23.2 33.4 0.2 40.4 99 99.8 93.6 60.6 42.8 0 0 0 g 0 0 0 0 0 0 0 0 0 49.8 17.4 98.8 0 0.2 0 0 0.6 22.6 0 0 0 t 0 0 0 0 0 0 0 0 0 1 2 0.2 1.2 0.6 0.2 2 38.2 24 0 0 0

M08926_2.00_shift9 (ZBTB7A)
; oligos_7nt_mkv5_m1 versus M08926_2.00 (ZBTB7A); m=211/215; ncol2=9; w=0; offset=3; strand=D; shift=9; score=0.42164; ---------rmGmCCCyc--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 26 47.2 0.8 58.4 0.2 0 4.4 0.6 10.6 0 0 0 c 0 0 0 0 0 0 0 0 0 23.2 33.4 0.2 40.4 99 99.8 93.6 60.6 42.8 0 0 0 g 0 0 0 0 0 0 0 0 0 49.8 17.4 98.8 0 0.2 0 0 0.6 22.6 0 0 0 t 0 0 0 0 0 0 0 0 0 1 2 0.2 1.2 0.6 0.2 2 38.2 24 0 0 0

M01965_2.00_rc_shift7 (M01965_2.00_rc)
; oligos_7nt_mkv5_m1 versus M01965_2.00_rc; m=212/215; ncol2=9; w=0; offset=1; strand=R; shift=7; score=0.420309; -------rssCGCcmw----- ; cor=; Ncor= a 0 0 0 0 0 0 0 26.6951 17.0249 0.941705 0 1.40615 0 8.43249 41.9828 34.1094 0 0 0 0 0 c 0 0 0 0 0 0 0 23.9143 53.2328 33.1134 99.9041 0.00148976 86.4773 55.2624 27.3102 20.8963 0 0 0 0 0 g 0 0 0 0 0 0 0 36.3967 28.0692 64.7113 0.00126108 98.579 11.587 24.0971 13.2933 15.636 0 0 0 0 0 t 0 0 0 0 0 0 0 12.9939 1.67309 1.2336 0.0866577 0.0133113 1.93456 12.208 17.4137 29.3583 0 0 0 0 0

M09016_2.00_shift7 (SP6)
; oligos_7nt_mkv5_m1 versus M09016_2.00 (SP6); m=213/215; ncol2=24; w=0; offset=1; strand=D; shift=7; score=0.414672; -------CyCCkCCYccyyCy ; cor=; Ncor= a 0 0 0 0 0 0 0 4.60922 1.002 3.00601 4.80962 11.2224 2.80561 0.801603 1.80361 19.2385 9.81964 19.8397 8.61723 6.81363 9.01804 c 0 0 0 0 0 0 0 87.3747 48.8978 93.7876 81.7635 0.801603 91.3828 93.988 71.3427 54.1082 60.9218 30.2605 40.8818 70.3407 52.3046 g 0 0 0 0 0 0 0 2.40481 0 2.40481 1.60321 26.4529 3.20641 2.20441 0.601202 3.20641 6.21242 7.61523 17.0341 6.41283 9.81964 t 0 0 0 0 0 0 0 5.61122 50.1002 0.801603 11.8236 61.523 2.60521 3.00601 26.2525 23.4469 23.0461 42.2846 33.4669 16.4329 28.8577

M08293_2.00_shift1 (KLF1)
; oligos_7nt_mkv5_m1 versus M08293_2.00 (KLF1); m=214/215; ncol2=15; w=-5; offset=-5; strand=D; shift=1; score=0.406497; -ccccggCCmCrCCCh----- ; cor=; Ncor= a 0 15 14.2 22 17 21.6 15.4 9.4 5.2 46.8 0 40.6 0 0 0 36.8 0 0 0 0 0 c 0 44.6 54.4 45.4 43 16.8 14.2 80.8 86.2 51.6 100 0 100 100 98.6 27.6 0 0 0 0 0 g 0 21.6 20.8 17.6 23.4 46.2 64 5.8 0.2 1.6 0 51.8 0 0 0 8.4 0 0 0 0 0 t 0 18.8 10.6 15 16.6 15.4 6.4 4 8.4 0 0 7.6 0 0 1.4 27.2 0 0 0 0 0

M07612_2.00_shift9 (ZNF202)
; oligos_7nt_mkv5_m1 versus M07612_2.00 (ZNF202); m=215/215; ncol2=8; w=0; offset=3; strand=D; shift=9; score=0.400207; ---------CCkCsTCC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 100 100 0 100 50 0 100 100 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 50 0 50 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 50 0 0 100 0 0 0 0 0 0

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv4_m4_shift8 ; 181 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv4_m4_shift8 (oligos_6nt_mkv4_m4)
; oligos_6nt_mkv4_m4; m=0 (reference); ncol1=13; shift=8; ncol=21; --------ssCGCCCCCGCss ; Alignment reference a 0 0 0 0 0 0 0 0 1639 1696 411 561 362 406 436 500 324 528 258 2056 1549 c 0 0 0 0 0 0 0 0 6989 7847 14122 330 13578 13231 12107 13119 14298 219 14416 7180 6569 g 0 0 0 0 0 0 0 0 4766 4310 627 13422 950 1466 2460 1519 543 14001 540 4320 4939 t 0 0 0 0 0 0 0 0 2101 1642 335 1182 605 392 492 357 330 747 281 1939 2438

M04437_2.00_shift8 (EGR1)
; oligos_6nt_mkv4_m4 versus M04437_2.00 (EGR1); m=1/180; ncol2=13; w=0; offset=0; strand=D; shift=8; score= 0.8537; --------cmCrCCCmCgCmm ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.713 33.137 9.66458 31.2385 1.54779 2.98439 5.56261 59.4771 0.032352 17.4956 7.29218 36.6286 25.5986 c 0 0 0 0 0 0 0 0 39.8983 41.6636 73.5642 8.67825 97.2874 93.3119 77.4321 33.5479 98.625 13.0649 74.9754 25.5198 40.7019 g 0 0 0 0 0 0 0 0 15.8413 12.5506 6.11728 48.8111 0.191479 1.72942 1.0414 4.23373 0.210288 60.1638 5.01722 21.9221 15.2345 t 0 0 0 0 0 0 0 0 19.5474 12.6488 10.654 11.2721 0.973352 1.97429 15.9639 2.7412 1.13232 9.27571 12.7152 15.9295 18.4651

M04462_2.00_shift8 (EGR4)
; oligos_6nt_mkv4_m4 versus M04462_2.00 (EGR4); m=2/180; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.853399; --------ymCGCCCMCGCac ; cor=; Ncor= a 0 0 0 0 0 0 0 0 18.605 38.9584 0.633624 9.8065 0 0.0572574 0 72.8326 0 16.0613 1.10299 57.2542 24.1513 c 0 0 0 0 0 0 0 0 42.2801 56.974 98.2963 0.322504 99.7999 99.9284 95.7088 25.7694 99.9857 1.82149 89.5344 14.9184 45.2371 g 0 0 0 0 0 0 0 0 10.169 1.09935 0 83.3851 0.0428878 0 0.205648 1.14763 0.0143225 74.7991 2.70617 22.6933 8.738 t 0 0 0 0 0 0 0 0 28.9459 2.96826 1.07012 6.48591 0.157255 0.0143143 4.08555 0.250391 0 7.31812 6.65641 5.13409 21.8737

M08996_2.00_shift7 (M08996_2.00)
; oligos_6nt_mkv4_m4 versus M08996_2.00; m=3/180; ncol2=14; w=-1; offset=-1; strand=D; shift=7; score=0.849371; -------cyCCgCCCmCgCmc ; cor=; Ncor= a 0 0 0 0 0 0 0 10.5691 10.3659 16.8699 0.406504 23.9837 0 0.609756 0 44.9187 1.01626 16.2602 1.42276 35.1626 10.7724 c 0 0 0 0 0 0 0 57.7236 54.878 77.8455 98.9837 0 100 98.9837 96.3415 54.4715 98.7805 1.21951 89.6341 33.9431 47.1545 g 0 0 0 0 0 0 0 9.7561 8.53659 2.84553 0.609756 61.1789 0 0.406504 0.203252 0.203252 0 67.0732 3.86179 17.2764 19.3089 t 0 0 0 0 0 0 0 21.9512 26.2195 2.43902 0 14.8374 0 0 3.45528 0.406504 0.203252 15.4472 5.0813 13.6179 22.7642

M04438_2.00_shift8 (EGR1)
; oligos_6nt_mkv4_m4 versus M04438_2.00 (EGR1); m=4/180; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.843235; --------cmCrCCCmCgcmc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.812 28.5357 7.63283 29.7004 2.48685 4.75973 4.16748 54.8634 0.170648 22.7166 8.27459 31.8616 19.8425 c 0 0 0 0 0 0 0 0 41.1735 47.1176 78.0531 7.48997 94.1416 90.0915 77.0299 32.5111 95.9776 13.8829 66.0792 31.813 44.6646 g 0 0 0 0 0 0 0 0 16.2306 10.4727 2.55749 46.4378 0.908656 2.746 4.40227 6.24303 0 42.2063 8.17388 21.4782 14.6341 t 0 0 0 0 0 0 0 0 22.7838 13.8739 11.7565 16.3718 2.46294 2.40275 14.4003 6.38239 3.85178 21.1943 17.4723 14.8472 20.8587

M07928_2.00_shift7 (EGR1)
; oligos_6nt_mkv4_m4 versus M07928_2.00 (EGR1); m=5/180; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.826908; -------yyCCGCCCmCGCmc ; cor=; Ncor= a 0 0 0 0 0 0 0 10.2828 13.8817 14.91 0.7712 7.455 0 0 0 37.018 0 3.856 0.2571 33.419 10.2828 c 0 0 0 0 0 0 0 46.7866 40.1028 76.3496 98.7147 0 100 100 94.0874 61.9537 100 0 93.3162 28.5347 47.0437 g 0 0 0 0 0 0 0 17.7378 19.7943 2.5707 0 88.1748 0 0 0 1.0283 0 88.689 1.7995 22.108 23.1362 t 0 0 0 0 0 0 0 25.1928 26.2211 6.1697 0.5141 4.3702 0 0 5.9126 0 0 7.45501 4.6272 15.9383 19.5373

M04461_2.00_shift8 (EGR4)
; oligos_6nt_mkv4_m4 versus M04461_2.00 (EGR4); m=6/180; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.826652; --------cmCGCCCACGCAm ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.0333 44.0628 0.720243 5.48356 0 0 0.120126 83.4085 0.154172 3.15973 0.132363 72.7656 29.7605 c 0 0 0 0 0 0 0 0 45.2245 51.0423 98.1425 0.343824 99.9614 99.8169 95.694 16.2371 99.788 0.597042 97.9106 8.1928 39.0498 g 0 0 0 0 0 0 0 0 8.91357 1.65304 0.15163 91.2986 0 0.115663 0.0646831 0.209407 0.0192715 95.1226 0.264725 13.9896 9.72383 t 0 0 0 0 0 0 0 0 24.8286 3.2418 0.985595 2.87402 0.03861 0.0674699 4.12123 0.144974 0.0385431 1.1206 1.69235 5.052 21.4658

M04439_2.00_shift8 (EGR2)
; oligos_6nt_mkv4_m4 versus M04439_2.00 (EGR2); m=7/180; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.812906; --------mmCrCCCACGCac ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.001 40.4671 0.527831 25.1462 0 0.202327 1.18203 86.007 0 15.5957 0.790861 41.8363 23.923 c 0 0 0 0 0 0 0 0 40.446 43.3121 94.6737 1.00715 99.7472 99.7977 77.7384 13.8187 99.8482 2.85199 86.6872 18.8507 39.7364 g 0 0 0 0 0 0 0 0 12.367 5.64756 1.53551 64.1001 0.252781 0 0.197006 0.174368 0 71.2274 1.53779 23.4097 14.9518 t 0 0 0 0 0 0 0 0 21.186 10.5732 3.26296 9.74659 0 0 20.8826 0 0.151822 10.3249 10.9842 15.9033 21.3887

M04583_2.00_shift8 (EGR3)
; oligos_6nt_mkv4_m4 versus M04583_2.00 (EGR3); m=8/180; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.802928; --------mmCGCCCACGCam ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.6547 52.8347 0.0796766 5.49078 0.0943341 0.170885 0.075841 92.8765 0.208989 4.05723 0.12021 62.8749 26.3763 c 0 0 0 0 0 0 0 0 37.4878 45.5584 99.9203 0.319454 99.8172 99.7614 82.8379 7.107 99.6674 0.331428 96.9118 9.8676 38.6503 g 0 0 0 0 0 0 0 0 11.9702 0.168541 0 92.4505 0.0619067 0.0530332 0.0171254 0 0.0677008 93.5178 0 17.1504 11.7041 t 0 0 0 0 0 0 0 0 23.8873 1.43841 0 1.73925 0.0265315 0.0147314 17.0691 0.0164577 0.0559268 2.09352 2.96803 10.1071 23.2693

M02883_2.00_shift8 (EGR1)
; oligos_6nt_mkv4_m4 versus M02883_2.00 (EGR1); m=9/180; ncol2=14; w=0; offset=0; strand=D; shift=8; score=0.785241; --------tmCGCCCmCGCAw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.9478 51.3906 0.322373 10.5203 0 0.260417 0 65.2638 0.325309 1.90616 1 68.0894 27.9057 c 0 0 0 0 0 0 0 0 24.1127 39.5405 96.9697 0.535578 98.0026 99.2839 92.8215 34.3593 99.5446 1.13636 93.8125 6.91057 24.8527 g 0 0 0 0 0 0 0 0 15.3967 3.62757 0.773694 85.4246 0.773196 0 0.93633 0 0 93.1818 1.1875 14.2276 12.5335 t 0 0 0 0 0 0 0 0 35.5428 5.44135 1.93424 3.51951 1.22423 0.455729 6.2422 0.376884 0.130124 3.77566 4 10.7724 34.7081

M04584_2.00_shift8 (EGR3)
; oligos_6nt_mkv4_m4 versus M04584_2.00 (EGR3); m=10/180; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.773193; --------hmCGCCCACGCRh ; cor=; Ncor= a 0 0 0 0 0 0 0 0 29.6397 41.0368 0 1.7082 0.269654 0.041632 0.100806 97.2458 0.207727 18.6845 0.38088 69.4734 30.1187 c 0 0 0 0 0 0 0 0 30.5978 58.1371 99.6472 0.542605 99.6059 99.9584 96.8145 2.7339 99.7507 0.832974 91.4492 2.53183 35.6176 g 0 0 0 0 0 0 0 0 13.5597 0.0413052 0.124507 96.5032 0.0829703 0 0.120968 0.0202511 0.0415455 68.9645 3.10417 25.6944 7.72756 t 0 0 0 0 0 0 0 0 26.2029 0.7848 0.228263 1.24598 0.0414852 0 2.96371 0 0 11.518 5.0657 2.30035 26.5361

M04440_2.00_shift8 (EGR2)
; oligos_6nt_mkv4_m4 versus M04440_2.00 (EGR2); m=11/180; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.759895; --------hmCGCCCACrCrm ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.0908 42.3604 0.683956 12.222 0.346821 0.318011 0.110865 98.7931 0.0290782 27.4909 0.983757 56.8829 27.4287 c 0 0 0 0 0 0 0 0 30.7155 51.7798 97.9766 0.342215 99.3642 99.3929 95.2882 1.2069 99.9709 0.138145 78.6548 7.85903 35.8639 g 0 0 0 0 0 0 0 0 14.6015 1.80723 0.427472 84.0381 0.0289017 0 0.332594 0 0 59.368 6.17708 29.7981 12.9727 t 0 0 0 0 0 0 0 0 28.5922 4.05257 0.911941 3.3977 0.260116 0.289101 4.26829 0 0 13.0029 14.1844 5.45996 23.7347

M05860_2.00_shift7 (M05860_2.00)
; oligos_6nt_mkv4_m4 versus M05860_2.00; m=12/180; ncol2=13; w=-1; offset=-1; strand=D; shift=7; score=0.751394; -------cymCGCCCmCGCa- ; cor=; Ncor= a 0 0 0 0 0 0 0 22.4 21 32.6 1 22.2 0.1 0.1 0.1 64.5 0.1 12.8 3.5 41 0 c 0 0 0 0 0 0 0 32.3 31.8 51.5 93.5 0.7 99.7 99.8 92.1 35.1 99.8 3.2 71.6 22.3 0 g 0 0 0 0 0 0 0 22.9 19.3 8.6 0.9 69.5 0.1 0.1 0.1 0.2 0.1 71 7.5 22.2 0 t 0 0 0 0 0 0 0 22.4 27.9 7.3 4.6 7.6 0.1 0.1 7.7 0.1 0.1 13.1 17.5 14.5 0

M06073_2.00_shift7 (M06073_2.00)
; oligos_6nt_mkv4_m4 versus M06073_2.00; m=13/180; ncol2=14; w=-1; offset=-1; strand=D; shift=7; score=0.746113; -------mcmCrCCCmCrcmm ; cor=; Ncor= a 0 0 0 0 0 0 0 27.4252 23.9949 36.4842 8.51155 32.763 1.62532 0 1.66809 67.408 0.342173 30.8811 15.6544 40.3372 25.6059 c 0 0 0 0 0 0 0 32.4569 37.3824 47.6476 81.9076 3.89222 98.3747 100 83.2763 29.8118 99.6578 13.6869 59.0248 25.4215 38.9118 g 0 0 0 0 0 0 0 20.8976 15.0128 6.97177 3.84944 51.0693 0 0 0 0.25663 0 46.1078 9.83747 20.882 15.5464 t 0 0 0 0 0 0 0 19.2203 23.6099 8.89649 5.73139 12.2754 0 0 15.0556 2.52352 0 9.32421 15.4833 13.3593 19.936

M06072_2.00_shift7 (M06072_2.00)
; oligos_6nt_mkv4_m4 versus M06072_2.00; m=14/180; ncol2=14; w=-1; offset=-1; strand=D; shift=7; score=0.742682; -------hmmCGCCCmCvymm ; cor=; Ncor= a 0 0 0 0 0 0 0 27.7778 26.3158 47.3684 10.5263 15.7895 0 0 0 57.8947 0 31.5789 10.5263 57.8947 26.3158 c 0 0 0 0 0 0 0 44.4444 47.3684 47.3684 84.2105 0 100 94.7368 100 36.8421 100 26.3158 52.6316 26.3158 47.3684 g 0 0 0 0 0 0 0 0 21.0526 5.26316 0 73.6842 0 5.26316 0 0 0 42.1053 5.26316 5.26316 5.26316 t 0 0 0 0 0 0 0 27.7778 5.26316 0 5.26316 10.5263 0 0 0 5.26316 0 0 31.5789 10.5263 21.0526

M09515_2.00_shift8 (M09515_2.00)
; oligos_6nt_mkv4_m4 versus M09515_2.00; m=15/180; ncol2=12; w=0; offset=0; strand=D; shift=8; score=0.738446; --------cmCrCCCACrca- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.4 32.9 1.4 25.3 0.1 0.1 0.1 86.1 0.1 25.5 2.6 32.2 0 c 0 0 0 0 0 0 0 0 35.7 51.3 95.3 0.1 99.7 99.7 94.3 13.7 99.7 3.5 67.8 23.1 0 g 0 0 0 0 0 0 0 0 19.2 6.6 0.1 58.7 0.1 0.1 0.1 0.1 0.1 55.2 18.2 23.1 0 t 0 0 0 0 0 0 0 0 24.8 9.2 3.2 15.9 0.1 0.1 5.5 0.1 0.1 15.8 11.4 21.6 0

M02884_2.00_shift8 (EGR1)
; oligos_6nt_mkv4_m4 versus M02884_2.00 (EGR1); m=16/180; ncol2=14; w=0; offset=0; strand=D; shift=8; score=0.725575; --------wACGCCCACGCAh ; cor=; Ncor= a 0 0 0 0 0 0 0 0 27.2298 73.7508 0.672372 1.83443 0 0 0 79.544 0 0 0 86.166 29.3902 c 0 0 0 0 0 0 0 0 23.0951 24.9209 98.7775 0 100 99.2159 97.9714 20 99.9394 0 99.2202 1.31752 27.9268 g 0 0 0 0 0 0 0 0 11.3999 0.189753 0.183374 98.1656 0 0 0 0.456026 0 99.9073 0 10.5402 6.34146 t 0 0 0 0 0 0 0 0 38.2753 1.13852 0.366748 0 0 0.784077 2.02864 0 0.0605694 0.0926784 0.779844 1.97628 36.3415

M02915_2.00_shift7 (EGR3)
; oligos_6nt_mkv4_m4 versus M02915_2.00 (EGR3); m=17/180; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.714625; -------yhmCGCCCMCGCAy ; cor=; Ncor= a 0 0 0 0 0 0 0 19.4798 26.747 58.5131 0.106952 2.87958 0 0 0 71.1479 0 1.73719 0.104004 80.6905 24.3844 c 0 0 0 0 0 0 0 37.2832 29.2169 39.7843 99.1979 1.39616 99.8924 99.4647 95.445 27.9312 99.5223 1.24722 98.752 3.45269 36.036 g 0 0 0 0 0 0 0 16.0694 11.506 0.567537 0 94.1536 0.107643 0 0.366492 0.675261 0.37155 95.8575 0.0520021 10.7417 6.60661 t 0 0 0 0 0 0 0 27.1676 32.5301 1.13507 0.695187 1.57068 0 0.535332 4.18848 0.245549 0.106157 1.15813 1.09204 5.11509 32.973

M10279_2.00_shift9 (EGR3)
; oligos_6nt_mkv4_m4 versus M10279_2.00 (EGR3); m=18/180; ncol2=12; w=0; offset=1; strand=D; shift=9; score=0.709072; ---------mCGCCyACGCab ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 64 0 5.69431 0 0 0 100 0 0 0 65.8342 15.1 c 0 0 0 0 0 0 0 0 0 34 100 0 100 100 67.9 0 100 0 98.1 9.79021 27.3 g 0 0 0 0 0 0 0 0 0 0 0 88.6114 0 0 0 0 0 100 0 7.29271 27.3 t 0 0 0 0 0 0 0 0 0 2 0 5.69431 0 0 32.1 0 0 0 1.9 17.0829 30.3

M08317_2.00_shift6 (KLF10)
; oligos_6nt_mkv4_m4 versus M08317_2.00 (KLF10); m=19/180; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score=0.701517; ------gcCmCRCCCCCyscc ; cor=; Ncor= a 0 0 0 0 0 0 5.6645 19.1721 3.9216 45.098 0 29.1939 0 0.2179 0.2179 19.1721 4.5752 16.5577 11.5468 11.5468 13.9434 c 0 0 0 0 0 0 17.8649 64.2702 87.3638 47.4946 94.5534 0 100 99.7821 89.3246 69.0632 69.281 28.976 38.9978 59.0414 49.4553 g 0 0 0 0 0 0 66.2309 6.5359 1.3072 7.4074 4.5752 68.8453 0 0 0 0.6536 4.793 23.3115 27.6688 20.0436 22.0044 t 0 0 0 0 0 0 10.2397 10.0218 7.4074 0 0.8715 1.9608 0 0 10.4575 11.1111 21.3508 31.1547 21.7865 9.3682 14.5969

M02886_2.00_shift7 (EGR2)
; oligos_6nt_mkv4_m4 versus M02886_2.00 (EGR2); m=20/180; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.700896; -------yhmCGCCCACGCah ; cor=; Ncor= a 0 0 0 0 0 0 0 24.8517 26.3117 48.7763 0.897729 9.80359 0.159943 0.284495 0.353833 87.7621 0 3.52679 0.339789 55.6715 27.4918 c 0 0 0 0 0 0 0 29.8259 28.5412 41.1833 97.3068 0.822562 99.2003 99.2176 84.92 11.2903 99.679 1.74628 91.2504 10.6025 30.5764 g 0 0 0 0 0 0 0 19.1314 13.4922 2.33186 0.457666 82.3737 0.390972 0.302276 0 0.584677 0.249643 90.6865 0.30581 20.1279 13.1483 t 0 0 0 0 0 0 0 26.1909 31.6548 7.70861 1.33779 7.00017 0.2488 0.19559 14.7262 0.362903 0.0713267 4.0404 8.10398 13.5981 28.7835

M10216_2.00_shift9 (EGR4)
; oligos_6nt_mkv4_m4 versus M10216_2.00 (EGR4); m=21/180; ncol2=12; w=0; offset=1; strand=D; shift=9; score=0.700322; ---------MCrCCCACGCAw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 28 0 34 0 0 0 90.7 0 0 0 73.8739 36.8368 c 0 0 0 0 0 0 0 0 0 70 100 0 100 100 75.9 9.3 100 0 98.1 7.10711 10.5105 g 0 0 0 0 0 0 0 0 0 0 0 56.6 0 0 0 0 0 94.3 0 9.50951 0 t 0 0 0 0 0 0 0 0 0 2 0 9.4 0 0 24.1 0 0 5.7 1.9 9.50951 52.6527

M10188_2.00_shift9 (EGR1)
; oligos_6nt_mkv4_m4 versus M10188_2.00 (EGR1); m=22/180; ncol2=12; w=0; offset=1; strand=D; shift=9; score=0.696969; ---------mCGCCYACGCAw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 57.7 0 10.9 0 0 0 83.6837 0 1.8 0 87.2 42.3576 c 0 0 0 0 0 0 0 0 0 42.3 100 0 100 100 69.1 14.5145 98.2 0 92.7 5.1 6.09391 g 0 0 0 0 0 0 0 0 0 0 0 76.4 0 0 0 1.8018 0 98.2 0 2.6 6.09391 t 0 0 0 0 0 0 0 0 0 0 0 12.7 0 0 30.9 0 1.8 0 7.3 5.1 45.4545

M10197_2.00_shift9 (EGR2)
; oligos_6nt_mkv4_m4 versus M10197_2.00 (EGR2); m=23/180; ncol2=12; w=0; offset=1; strand=D; shift=9; score=0.686236; ---------mCGCCyACGCAh ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 49.95 1.2987 12.5 0 0 0 100 0 3.7962 0 81.4186 34.1 c 0 0 0 0 0 0 0 0 0 44.8551 97.4026 0 100 100 62.5 0 100 0 96.2038 9.29071 25 g 0 0 0 0 0 0 0 0 0 2.5974 0 82.5 0 0 0 0 0 89.9101 0 3.6963 9.1 t 0 0 0 0 0 0 0 0 0 2.5974 1.2987 5 0 0 37.5 0 0 6.29371 3.7962 5.59441 31.8

M02931_2.00_shift8 (M02931_2.00)
; oligos_6nt_mkv4_m4 versus M02931_2.00; m=24/180; ncol2=15; w=0; offset=0; strand=D; shift=8; score=0.681524; --------wmCGCCCACGCAh ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.3199 65.7557 0 1.79558 0.0547945 0.435967 0.214362 79.5125 0 0.42333 0.162075 88.6555 31.6327 c 0 0 0 0 0 0 0 0 24.1051 32.348 99.1347 0.644567 99.6164 99.1281 95.1233 20.3134 99.7272 0.70555 98.9735 3.06122 26.8707 g 0 0 0 0 0 0 0 0 9.34004 0.725042 0.270416 96.639 0.109589 0.217984 0.267953 0 0.163666 97.9774 0 6.18247 7.82313 t 0 0 0 0 0 0 0 0 35.2349 1.17122 0.594916 0.92081 0.219178 0.217984 4.39443 0.174115 0.109111 0.893697 0.864398 2.10084 33.6735

M08092_2.00_shift6 (SP2)
; oligos_6nt_mkv4_m4 versus M08092_2.00 (SP2); m=25/180; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score=0.680501; ------gyCCCGCCyCyyccs ; cor=; Ncor= a 0 0 0 0 0 0 9.48992 2.31317 3.08422 0 0 10.3203 0 0 0 12.2183 6.82088 11.0913 13.4045 13.5231 12.0403 c 0 0 0 0 0 0 15.0059 48.102 82.2064 99.5848 97.4496 0 100 98.2206 65.7177 70.9371 57.5919 32.8588 42.5267 47.0937 44.1874 g 0 0 0 0 0 0 60.9727 15.2432 0.059312 0.415184 0 75.9193 0 0 0 0 5.87189 19.2764 23.7841 24.1993 25.0297 t 0 0 0 0 0 0 14.5314 34.3416 14.6501 0 2.55042 13.7604 0 1.77936 34.2823 16.8446 29.7153 36.7734 20.2847 15.1839 18.7426

M02885_2.00_shift9 (EGR2)
; oligos_6nt_mkv4_m4 versus M02885_2.00 (EGR2); m=26/180; ncol2=11; w=0; offset=1; strand=D; shift=9; score=0.674366; ---------mCGCCCACGCa- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 55.8398 0 6.94444 0.370828 1.4944 0 93.9606 0 2.45883 0.232019 60.5245 0 c 0 0 0 0 0 0 0 0 0 32.7703 93.8862 0 96.2917 96.7621 82.3331 4.814 98.4355 0 91.9374 5.48951 0 g 0 0 0 0 0 0 0 0 0 4.53668 1.69492 87.8296 1.54512 0.933998 2.13124 1.13786 0.125156 93.5746 1.16009 18.951 0 t 0 0 0 0 0 0 0 0 0 6.85328 4.41889 5.22599 1.79234 0.809465 15.5356 0.0875274 1.4393 3.9666 6.67053 15.035 0

M00249_2.00_shift9 (WT1)
; oligos_6nt_mkv4_m4 versus M00249_2.00 (WT1); m=27/180; ncol2=11; w=0; offset=1; strand=D; shift=9; score=0.672719; ---------mCyCCCCCrca- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.7654 9.76681 2.48942 0.022935 0.022935 0.022935 9.70563 0.022935 25.8716 15.2561 32.3995 0 c 0 0 0 0 0 0 0 0 0 29.4673 70.6996 32.473 99.9312 99.9312 99.9312 90.2485 99.9312 15.4144 54.2316 22.5335 0 g 0 0 0 0 0 0 0 0 0 19.8837 9.76681 2.48942 0.022935 0.022935 0.022935 0.022935 0.022935 53.5748 15.2561 22.5335 0 t 0 0 0 0 0 0 0 0 0 19.8837 9.76681 62.5481 0.022935 0.022935 0.022935 0.022935 0.022935 5.13927 15.2561 22.5335 0

M08323_2.00_shift7 (KLF15)
; oligos_6nt_mkv4_m4 versus M08323_2.00 (KLF15); m=28/180; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.667678; -------ccCcggCyCCgCCY ; cor=; Ncor= a 0 0 0 0 0 0 0 5.4217 3.8153 6.4257 13.6546 16.2651 9.6386 2.6104 9.4378 8.2329 0 18.8755 0 0 0 c 0 0 0 0 0 0 0 65.261 64.0562 70.8835 62.4498 23.0924 24.8996 85.3414 47.5904 88.755 100 0 99.1968 100 70.8835 g 0 0 0 0 0 0 0 16.4659 17.8715 5.4217 8.8353 36.1446 46.1847 0 1.2048 3.012 0 58.8353 0.2008 0 0.8032 t 0 0 0 0 0 0 0 12.8514 14.257 17.2691 15.0602 24.498 19.2771 12.0482 41.7671 0 0 22.2892 0.6024 0 28.3133

M08871_2.00_shift8 (KLF1)
; oligos_6nt_mkv4_m4 versus M08871_2.00 (KLF1); m=29/180; ncol2=14; w=0; offset=0; strand=D; shift=8; score=0.666221; --------cccrGCCmCrCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10.2249 16.3599 18.6094 28.0164 8.58896 8.99796 5.31697 42.9448 0.817996 38.0368 0.204499 0.613497 0.408998 c 0 0 0 0 0 0 0 0 62.3722 52.9652 47.2393 9.40695 16.7689 86.2986 90.3885 53.5787 97.7505 0 99.7955 98.773 98.9775 g 0 0 0 0 0 0 0 0 16.1554 20.2454 19.8364 45.8078 68.5072 2.24949 0.408998 1.02249 0 52.7607 0 0.408998 0.204499 t 0 0 0 0 0 0 0 0 11.2474 10.4294 14.3149 16.7689 6.13497 2.45399 3.88548 2.45399 1.43149 9.20245 0 0.204499 0.408998

M08363_2.00_shift7 (SP1)
; oligos_6nt_mkv4_m4 versus M08363_2.00 (SP1); m=30/180; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.658371; -------CCCcsscyCCkCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 3 5.8 1.4 20.2 13.6 6.4 12.6 12 13.8 3.2 21.6 0 1 1.8 c 0 0 0 0 0 0 0 73.2 71.2 84 55.2 26.4 44 67.8 52.6 80 93.2 0 96.6 97.6 87 g 0 0 0 0 0 0 0 6.8 9.2 2.4 9.2 42.4 31.8 5.6 8.8 2.8 0 40.8 1.4 1.4 0 t 0 0 0 0 0 0 0 17 13.8 12.2 15.4 17.6 17.8 14 26.6 3.4 3.6 37.6 2 0 11.2

M08882_2.00_shift6 (EGR1)
; oligos_6nt_mkv4_m4 versus M08882_2.00 (EGR1); m=31/180; ncol2=17; w=-2; offset=-2; strand=D; shift=6; score=0.657042; ------yyyCCrCCCmCgCmy ; cor=; Ncor= a 0 0 0 0 0 0 11.8 15 12.8 17.2 6 30 1.4 2.2 1.4 55.4 4 21.2 5 29.8 8.2 c 0 0 0 0 0 0 43.6 45.6 40.6 69.6 84.2 0.4 93 95.8 89.2 41 87 4.6 80.8 35.4 46 g 0 0 0 0 0 0 18.2 8.2 12.8 2.2 1 47.6 3.2 0.4 0.2 0.4 3.4 50.6 3 11.2 18 t 0 0 0 0 0 0 26.4 31.2 33.8 11 8.8 22 2.4 1.6 9.2 3.2 5.6 23.6 11.2 23.6 27.8

M07642_2.00_shift6 (ZNF519)
; oligos_6nt_mkv4_m4 versus M07642_2.00 (ZNF519); m=32/180; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score=0.654534; ------csgCsGCmGCCGCCC ; cor=; Ncor= a 0 0 0 0 0 0 6.41667 15.0833 10.4167 7.75 11.75 3.41667 0.0833333 29.0833 2.75 0.0833333 0.0833333 2.41667 0.0833333 0.0833333 1.08333 c 0 0 0 0 0 0 66.75 48.75 12.0833 80.0833 42.4167 7.41667 99.75 46.0833 6.41667 99.75 81.0833 0.0833333 99.75 99.4167 86.4167 g 0 0 0 0 0 0 18.75 26.4167 65.0833 8.75 25.4167 85.0833 0.0833333 7.75 86.4167 0.0833333 0.416667 75.4167 0.0833333 0.416667 11.0833 t 0 0 0 0 0 0 8.08333 9.75 12.4167 3.41667 20.4167 4.08333 0.0833333 17.0833 4.41667 0.0833333 18.4167 22.0833 0.0833333 0.0833333 1.41667

M08994_2.00_shift6 (M08994_2.00)
; oligos_6nt_mkv4_m4 versus M08994_2.00; m=33/180; ncol2=14; w=-2; offset=-2; strand=D; shift=6; score=0.650352; ------ccyCCrCCCMCrCm- ; cor=; Ncor= a 0 0 0 0 0 0 10.6 17.6 11 19 3.2 32 0 1 0.8 68.2 1.8 31.2 4.4 30.2 0 c 0 0 0 0 0 0 50 52.8 54.2 73 92.4 1.4 98 98.4 92.6 29.6 95 6.8 72.8 41.8 0 g 0 0 0 0 0 0 17 10.8 9.6 0.8 1.6 41.8 1.8 0.4 0.4 1.4 1.2 39.8 13.4 14.2 0 t 0 0 0 0 0 0 22.4 18.8 25.2 7.2 2.8 24.8 0.2 0.2 6.2 0.8 2 22.2 9.4 13.8 0

M02889_2.00_shift7 (EGR4)
; oligos_6nt_mkv4_m4 versus M02889_2.00 (EGR4); m=34/180; ncol2=16; w=-1; offset=-1; strand=D; shift=7; score=0.648259; -------yymCGCCCACGCAh ; cor=; Ncor= a 0 0 0 0 0 0 0 20.9027 20.9149 55.1426 2.00556 6.32465 0.238663 2.52578 0 71.8162 0.915713 2.54896 0.20982 68.1758 32.4289 c 0 0 0 0 0 0 0 26.1329 30.4483 38.6501 88.6815 5.40325 96.4851 93.6224 94.8105 16.8369 91.6129 19.6149 91.3554 12.4131 26.3614 g 0 0 0 0 0 0 0 17.9832 9.64318 3.03335 2.97855 80.2298 1.36689 2.25216 2.36865 5.55378 2.37253 75.0684 3.8397 12.2651 7.7068 t 0 0 0 0 0 0 0 34.9812 38.9936 3.17397 6.33439 8.04232 1.90931 1.59966 2.82084 5.79317 5.09886 2.76775 4.59505 7.14603 33.5029

M00778_2.00_shift10 (M00778_2.00)
; oligos_6nt_mkv4_m4 versus M00778_2.00; m=35/180; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.643526; ----------cgCCCMCGca- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 10.1428 18.7938 2.98506 0.0789937 0.779978 73.0394 0.052912 12.7618 6.82934 42.8018 0 c 0 0 0 0 0 0 0 0 0 0 65.8094 3.20121 95.93 99.6449 91.9744 25.3049 99.5715 4.33385 62.2543 16.064 0 g 0 0 0 0 0 0 0 0 0 0 5.56648 63.6582 0.255028 0.23731 0.206286 0.836105 0.0424629 74.1771 8.0143 21.9021 0 t 0 0 0 0 0 0 0 0 0 0 18.4814 14.3468 0.829957 0.0388368 7.03931 0.819549 0.333163 8.72729 22.9021 19.2321 0

M00765_2.00_shift8 (M00765_2.00)
; oligos_6nt_mkv4_m4 versus M00765_2.00; m=36/180; ncol2=9; w=0; offset=0; strand=D; shift=8; score=0.641175; --------cmCGCCCMc---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 17.435 41.7838 0.00455751 0.00455751 0.00455751 0.00455751 0.00455751 30.5774 7.56959 0 0 0 0 c 0 0 0 0 0 0 0 0 47.6951 58.2071 99.9863 8.49137 99.9863 91.4995 99.9863 69.4134 59.8878 0 0 0 0 g 0 0 0 0 0 0 0 0 17.435 0.00455751 0.00455751 91.4995 0.00455751 8.49137 0.00455751 0.00455751 7.56959 0 0 0 0 t 0 0 0 0 0 0 0 0 17.435 0 0 0 0 0 0 0 24.973 0 0 0 0

M08299_2.00_shift8 (KLF12)
; oligos_6nt_mkv4_m4 versus M08299_2.00 (KLF12); m=37/180; ncol2=15; w=0; offset=0; strand=D; shift=8; score=0.637994; --------cccgGCCmCGCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 7.6152 9.2184 19.8397 16.8337 12.2244 6.2124 4.4088 30.6613 0 14.2285 0 0 0 c 0 0 0 0 0 0 0 0 60.7214 55.3106 39.479 23.6473 5.01 87.3747 87.1743 63.3267 100 0.2004 100 100 86.7735 g 0 0 0 0 0 0 0 0 20.2405 17.2345 20.4409 49.8998 77.7555 3.8076 0.4008 5.6112 0 78.5571 0 0 0 t 0 0 0 0 0 0 0 0 11.4228 18.2365 20.2405 9.6192 5.01 2.6052 8.016 0.4008 0 7.014 0 0 13.2265

M08302_2.00_shift10 (EGR2)
; oligos_6nt_mkv4_m4 versus M08302_2.00 (EGR2); m=38/180; ncol2=9; w=0; offset=2; strand=D; shift=10; score=0.636081; ----------CgCCCmCdC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0739645 23.1509 0.0739645 0.0739645 0.0739645 37.9438 0.0739645 28.4763 0.0739645 0 0 c 0 0 0 0 0 0 0 0 0 0 99.7781 0.0739645 99.7781 99.7781 84.0976 61.9083 99.7781 0.0739645 89.1272 0 0 g 0 0 0 0 0 0 0 0 0 0 0.0739645 55.6953 0.0739645 0.0739645 0.0739645 0.0739645 0.0739645 45.932 10.7249 0 0 t 0 0 0 0 0 0 0 0 0 0 0.0739645 21.0799 0.0739645 0.0739645 15.7544 0.0739645 0.0739645 25.5178 0.0739645 0 0

M00233_2.00_shift10 (EGR2)
; oligos_6nt_mkv4_m4 versus M00233_2.00 (EGR2); m=39/180; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.630876; ----------crCCCmCgya- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 17.7414 25.6279 11.1401 0.99736 5.34589 49.217 2.94523 21.4637 12.4753 35.9394 0 c 0 0 0 0 0 0 0 0 0 0 50.1942 8.11473 80.6845 95.3311 71.9757 40.2955 90.034 11.205 47.1698 19.5277 0 g 0 0 0 0 0 0 0 0 0 0 11.6569 43.9776 2.18267 2.99623 2.26218 5.4534 1.9159 49.2231 14.2073 21.1541 0 t 0 0 0 0 0 0 0 0 0 0 20.4075 22.2798 5.99273 0.675269 20.4162 5.03412 5.10483 18.1082 26.1475 23.3789 0

M07727_2.00_shift10 (ZNF460)
; oligos_6nt_mkv4_m4 versus M07727_2.00 (ZNF460); m=40/180; ncol2=12; w=0; offset=2; strand=D; shift=10; score=0.63087; ----------cgCCrCCkCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 15.7 0.1 0.1 4.1 26.5 0.1 0.1 10.5 0.1 0.1 3.7 c 0 0 0 0 0 0 0 0 0 0 66.9 23.3 85.3 95.7 9.7 99.7 99.7 0.1 99.7 77.7 77.3 g 0 0 0 0 0 0 0 0 0 0 17.3 66.1 14.5 0.1 50.1 0.1 0.1 28.5 0.1 22.1 4.5 t 0 0 0 0 0 0 0 0 0 0 0.1 10.5 0.1 0.1 13.7 0.1 0.1 60.9 0.1 0.1 14.5

M08349_2.00_shift10 (EGR3)
; oligos_6nt_mkv4_m4 versus M08349_2.00 (EGR3); m=41/180; ncol2=9; w=0; offset=2; strand=D; shift=10; score=0.627621; ----------CkCCYCCdC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0647668 21.8264 0.0647668 0.0647668 0.0647668 18.1995 0.0647668 29.5984 0.0647668 0 0 c 0 0 0 0 0 0 0 0 0 0 99.8057 0.0647668 99.8057 99.8057 73.6399 81.671 99.8057 0.0647668 75.7124 0 0 g 0 0 0 0 0 0 0 0 0 0 0.0647668 49.0285 0.0647668 0.0647668 0.0647668 0.0647668 0.0647668 40.2202 24.158 0 0 t 0 0 0 0 0 0 0 0 0 0 0.0647668 29.0803 0.0647668 0.0647668 26.2306 0.0647668 0.0647668 30.1166 0.0647668 0 0

M00776_2.00_shift9 (M00776_2.00)
; oligos_6nt_mkv4_m4 versus M00776_2.00; m=42/180; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.626998; ---------mcgCCCmCgy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 28.0343 15.9193 23.9553 8.00057 1.93417 3.06438 62.2598 2.16924 21.9875 14.4571 0 0 c 0 0 0 0 0 0 0 0 0 40.1824 56.1223 8.72499 89.078 91.8062 79.0315 27.6968 92.2383 7.03203 46.117 0 0 g 0 0 0 0 0 0 0 0 0 12.2243 9.27695 49.2146 0.00744296 5.58274 1.29673 5.37263 2.25777 55.1731 13.3455 0 0 t 0 0 0 0 0 0 0 0 0 19.5589 18.6815 18.1051 2.91396 0.67684 16.6074 4.67074 3.33468 15.8074 26.0804 0 0

M00133_2.00_shift8 (M00133_2.00)
; oligos_6nt_mkv4_m4 versus M00133_2.00; m=43/180; ncol2=10; w=0; offset=0; strand=D; shift=8; score=0.622465; --------cmCgCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.0214 42.3407 2.97602 15.6909 0.0767376 0.0263797 0.0433909 29.6789 10.202 20.7575 0 0 0 c 0 0 0 0 0 0 0 0 45.8577 50.1866 90.9753 1.40928 98.7545 99.967 83.3039 56.2855 54.1945 29.7523 0 0 0 g 0 0 0 0 0 0 0 0 11.8882 2.87413 2.48578 66.892 0.00389772 0.00304224 0.00127157 1.35045 11.9721 14.923 0 0 0 t 0 0 0 0 0 0 0 0 21.2327 4.59858 3.56295 16.0079 1.1649 0 16.6514 12.6852 23.6315 34.5672 0 0 0

M01862_2.00_shift8 (M01862_2.00)
; oligos_6nt_mkv4_m4 versus M01862_2.00; m=44/180; ncol2=9; w=0; offset=0; strand=D; shift=8; score=0.620452; --------hmCGCCCmy---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.7384 42.0657 0.00439598 0.00439598 0.00439598 0.00439598 0.00439598 40.0281 6.56255 0 0 0 0 c 0 0 0 0 0 0 0 0 26.8904 57.9255 99.9868 0.00439598 99.9868 99.9868 99.9868 59.9631 55.5822 0 0 0 0 g 0 0 0 0 0 0 0 0 18.4418 0.00439598 0.00439598 99.9868 0.00439598 0.00439598 0.00439598 0.00439598 6.56255 0 0 0 0 t 0 0 0 0 0 0 0 0 27.9294 0 0 0 0 0 0 0 31.2927 0 0 0 0

M02932_2.00_shift7 (M02932_2.00)
; oligos_6nt_mkv4_m4 versus M02932_2.00; m=45/180; ncol2=16; w=-1; offset=-1; strand=D; shift=7; score=0.618846; -------mhmCGCCCmCkCAm ; cor=; Ncor= a 0 0 0 0 0 0 0 32.3142 32.2785 61.8182 0 7.54445 0 0.157812 0 51.7114 0.314961 0.422833 0.157978 89.1816 44.2511 c 0 0 0 0 0 0 0 32.4196 30.9072 36.6753 99.6845 0.432484 99.9473 99.737 100 48.1306 99.5276 16.7321 99.842 5.73848 32.2785 g 0 0 0 0 0 0 0 11.3337 3.69198 0.363636 0.0525762 91.11 0.0527148 0.105208 0 0.157978 0 25.5814 0 3.62183 4.95781 t 0 0 0 0 0 0 0 23.9325 33.1224 1.14286 0.262881 0.913023 0 0 0 0 0.15748 57.2637 0 1.45814 18.5127

M07658_2.00_shift6 (ZNF571)
; oligos_6nt_mkv4_m4 versus M07658_2.00 (ZNF571); m=46/180; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score=0.618074; ------CcGCCkCmGCCkCcs ; cor=; Ncor= a 0 0 0 0 0 0 0.213919 16.4147 9.59782 0.213919 0.213919 1.92527 0.213919 37.008 0.213919 0.213919 1.0696 1.0696 0.213919 11.3092 3.63663 c 0 0 0 0 0 0 76.255 63.4769 1.92527 96.7912 88.263 5.34798 87.4073 29.3069 7.03079 99.3582 84.8688 15.5876 78.8791 61.7656 43.8534 g 0 0 0 0 0 0 23.3172 0.213919 88.263 2.78095 1.92527 63.4484 10.4535 23.2316 92.5414 0.213919 13.8477 46.3919 20.6931 25 47.162 t 0 0 0 0 0 0 0.213919 19.8945 0.213919 0.213919 9.59782 29.2784 1.92527 10.4535 0.213919 0.213919 0.213919 36.9509 0.213919 1.92527 5.34798

M04470_2.00_shift9 (ZNF740)
; oligos_6nt_mkv4_m4 versus M04470_2.00 (ZNF740); m=47/180; ncol2=13; w=0; offset=1; strand=D; shift=9; score=0.618011; ---------cygCCCCCCCCa ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 15.541 8.9477 24.4419 2.9212 3.81944 0.361011 0.433839 0.433526 0.21692 0 4.37731 67.2363 c 0 0 0 0 0 0 0 0 0 48.2934 47.385 14.4533 93.5462 95.625 99.4224 99.5662 99.4942 99.5662 100 84.8952 14.2578 g 0 0 0 0 0 0 0 0 0 16.7756 4.34783 52.0999 1.97011 0 0 0 0.0722543 0 0 9.98767 11.2793 t 0 0 0 0 0 0 0 0 0 19.39 39.3195 9.00492 1.5625 0.555556 0.216606 0 0 0.21692 0 0.739827 7.22656

M02890_2.00_shift7 (EGR4)
; oligos_6nt_mkv4_m4 versus M02890_2.00 (EGR4); m=48/180; ncol2=16; w=-1; offset=-1; strand=D; shift=7; score=0.617841; -------awMCGCCCACGCAy ; cor=; Ncor= a 0 0 0 0 0 0 0 38.191 29.2683 72.6804 0 0.364964 0.819672 1.24481 0.421941 86.8852 0.421941 0.735294 0 83.9196 23.8806 c 0 0 0 0 0 0 0 20.603 24.3902 25.7732 100 0 97.541 98.7552 98.3122 12.0219 99.1561 0.735294 100 0 29.3532 g 0 0 0 0 0 0 0 17.0854 3.90244 0 0 99.2701 0 0 0 1.0929 0.421941 97.4265 0 14.0704 0.497512 t 0 0 0 0 0 0 0 24.1206 42.439 1.54639 0 0.364964 1.63934 0 1.26582 0 0 1.10294 0 2.01005 46.2687

M09506_2.00_shift10 (EGR1)
; oligos_6nt_mkv4_m4 versus M09506_2.00 (EGR1); m=49/180; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.616839; ----------CrCCCMCrCa- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 2.4 42.2 0.1 2.4 0.1 71.6 0.1 30 0.4 65.8 0 c 0 0 0 0 0 0 0 0 0 0 94 1 99.7 97.3 97.1 28.2 99.7 2.3 88.2 14.2 0 g 0 0 0 0 0 0 0 0 0 0 0.2 41.5 0.1 0.2 0.1 0.1 0.1 52.3 3.6 7.2 0 t 0 0 0 0 0 0 0 0 0 0 3.4 15.3 0.1 0.1 2.7 0.1 0.1 15.4 7.8 12.8 0

M08906_2.00_shift6 (ZNF281)
; oligos_6nt_mkv4_m4 versus M08906_2.00 (ZNF281); m=50/180; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score=0.616667; ------yCCCCTCCCCCwccc ; cor=; Ncor= a 0 0 0 0 0 0 9.12863 2.48963 1.65975 1.03734 12.8631 12.6556 0.414938 0.622407 0.622407 1.65975 1.03734 47.0954 14.1079 10.3734 13.278 c 0 0 0 0 0 0 27.1784 87.3444 94.1909 97.9253 74.0664 0.207469 96.473 97.9253 89.6266 97.5104 96.888 17.4274 50.8299 60.3734 45.8506 g 0 0 0 0 0 0 24.8963 1.65975 0.622407 0 0.207469 10.9959 0.414938 0.414938 1.65975 0.414938 0.829876 7.67635 18.0498 8.92116 17.8423 t 0 0 0 0 0 0 38.7967 8.50622 3.52697 1.03734 12.8631 76.1411 2.6971 1.03734 8.09129 0.414938 1.24481 27.8008 17.0124 20.332 23.029

M08999_2.00_shift7 (M08999_2.00)
; oligos_6nt_mkv4_m4 versus M08999_2.00; m=51/180; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.61485; -------CCCCTCCCCCaccc ; cor=; Ncor= a 0 0 0 0 0 0 0 1.8 1 0 8.4 16.6 0 0 0 0 0 62.8 18.4 8.4 9.8 c 0 0 0 0 0 0 0 95.8 98.6 99.8 86.6 0.4 100 100 98.8 99.2 100 23.6 61.6 67.4 60 g 0 0 0 0 0 0 0 0.6 0 0 0 3.8 0 0 0 0 0 2.8 6.8 10.6 16 t 0 0 0 0 0 0 0 1.8 0.4 0.2 5 79.2 0 0 1.2 0.8 0 10.8 13.2 13.6 14.2

M07652_2.00_shift10 (ZNF543)
; oligos_6nt_mkv4_m4 versus M07652_2.00 (ZNF543); m=52/180; ncol2=12; w=0; offset=2; strand=D; shift=10; score=0.609922; ----------sGsCCCCKCCc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 3.72984 0.100806 0.504032 0.100806 0.100806 0.100806 0.100806 0.100806 0.100806 11.3911 14.2137 c 0 0 0 0 0 0 0 0 0 0 31.9556 0.100806 50.1008 96.875 70.2621 87.6008 99.6976 0.504032 98.8911 88.4073 51.3105 g 0 0 0 0 0 0 0 0 0 0 64.2137 88.4073 30.746 0.100806 9.375 8.97177 0.100806 25.9073 0.504032 0.100806 20.6653 t 0 0 0 0 0 0 0 0 0 0 0.100806 11.3911 18.6492 2.92339 20.2621 3.32661 0.100806 73.4879 0.504032 0.100806 13.8105

M07715_2.00_shift6 (ZNF100)
; oligos_6nt_mkv4_m4 versus M07715_2.00 (ZNF100); m=53/180; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score=0.60985; ------ccGCCGCCGCCdysg ; cor=; Ncor= a 0 0 0 0 0 0 14.2031 24.7429 14.2031 1.09254 0.321337 16.2596 0.0642674 1.09254 8.80463 0.0642674 0.321337 27.5707 3.40617 13.946 0.835476 c 0 0 0 0 0 0 51.2211 35.2828 0.578406 93.1234 96.9794 1.34961 96.9794 95.1799 0.0642674 99.8072 97.7506 14.7172 29.3702 25 16.7738 g 0 0 0 0 0 0 23.9717 24.7429 81.2982 5.71979 1.09254 81.0411 0.0642674 0.0642674 74.1003 0.0642674 0.835476 32.455 6.491 52.5064 61.2468 t 0 0 0 0 0 0 10.6041 15.2314 3.92031 0.0642674 1.60668 1.34961 2.89203 3.66324 17.0308 0.0642674 1.09254 25.2571 60.7326 8.54756 21.144

M07927_2.00_shift1 (EGR1)
; oligos_6nt_mkv4_m4 versus M07927_2.00 (EGR1); m=54/180; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.609799; -ccscscccCCGCCCmCGCmc ; cor=; Ncor= a 0 13.0705 16.1826 11.6183 17.0124 13.9004 13.0705 12.6556 12.0332 15.7676 1.0373 19.2946 0 0 0 43.5685 0 5.6017 0 37.1369 10.3734 c 0 48.1328 49.5851 44.1909 45.8506 38.1743 49.7925 47.3029 41.0788 76.3486 97.5104 0 100 100 94.6058 56.0166 100 0 92.1162 28.8382 45.8506 g 0 22.6141 22.8216 25.1037 18.4647 30.7054 20.5394 17.4274 21.9917 2.4896 0.2075 71.5768 0 0 0 0.4149 0 85.6846 4.3568 18.6722 24.2739 t 0 16.1826 11.4108 19.0871 18.6722 17.2199 16.5975 22.6141 24.8963 5.39421 1.2448 9.1286 0 0 5.3942 0 0 8.7137 3.527 15.3527 19.5021

M07621_2.00_shift6 (ZNF30)
; oligos_6nt_mkv4_m4 versus M07621_2.00 (ZNF30); m=55/180; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score=0.609582; ------CAGCCGCCCCGTCCG ; cor=; Ncor= a 0 0 0 0 0 0 0.164474 77.1382 0.822368 0.164474 2.13816 6.74342 0.164474 0.164474 0.164474 1.48026 9.375 0.822368 0.164474 0.164474 3.45395 c 0 0 0 0 0 0 98.8487 17.2697 1.48026 97.5329 93.5855 4.11184 99.5066 97.5329 85.6908 94.2434 12.0066 6.08553 98.8487 90.9539 10.0329 g 0 0 0 0 0 0 0.822368 5.42763 95.5592 0.164474 1.48026 88.9803 0.164474 2.13816 10.6908 2.79605 75.8224 17.2697 0.822368 0.164474 85.6908 t 0 0 0 0 0 0 0.164474 0.164474 2.13816 2.13816 2.79605 0.164474 0.164474 0.164474 3.45395 1.48026 2.79605 75.8224 0.164474 8.71711 0.822368

M04698_2.00_rc_shift9 (E2F2_rc)
; oligos_6nt_mkv4_m4 versus M04698_2.00_rc (E2F2_rc); m=56/180; ncol2=11; w=0; offset=1; strand=R; shift=9; score=0.605599; ---------GCGCgCsCmCs- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 4.46927 0 10.2362 0 12.3134 0 8.48057 0 25.7576 0 7.26744 0 c 0 0 0 0 0 0 0 0 0 22.905 97.8142 11.0236 89.5 11.9403 97.8142 25.4417 85.6459 42.6407 97.8142 44.7674 0 g 0 0 0 0 0 0 0 0 0 70.9497 2.18579 70.4724 6.5 66.791 0 63.2509 10.5263 19.3723 2.18579 36.6279 0 t 0 0 0 0 0 0 0 0 0 1.67598 0 8.26772 4 8.95522 2.18579 2.82686 3.82775 12.2294 0 11.3372 0

M04469_2.00_shift9 (ZNF740)
; oligos_6nt_mkv4_m4 versus M04469_2.00 (ZNF740); m=57/180; ncol2=13; w=0; offset=1; strand=D; shift=9; score=0.604627; ---------cyrCCCCCCCCA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 17.6303 12.5679 29.8318 4.99584 9.32203 1.64684 2.00182 2.10623 0.927644 0.188147 9.74576 70.5214 c 0 0 0 0 0 0 0 0 0 47.5829 52.5213 14.0747 87.8435 89.4068 96.5233 95.9964 96.6117 97.8664 99.2474 89.4068 15.9759 g 0 0 0 0 0 0 0 0 0 17.2512 5.58573 43.2909 3.08077 1.18644 0.365965 0.636943 0.274725 0.649351 0.28222 0.508475 4.54545 t 0 0 0 0 0 0 0 0 0 17.5355 29.3251 12.8026 4.07993 0.0847458 1.46386 1.36488 1.00733 0.556586 0.28222 0.338983 8.95722

M04468_2.00_shift9 (ZNF740)
; oligos_6nt_mkv4_m4 versus M04468_2.00 (ZNF740); m=58/180; ncol2=13; w=0; offset=1; strand=D; shift=9; score=0.600628; ---------cygCCCCCCCCA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 10.4898 3.7037 13.6842 3.32393 0.10327 0.892538 0.757303 2.56321 1.37761 2.66999 0 84.486 c 0 0 0 0 0 0 0 0 0 61.1477 45.0794 12.2978 85.5127 93.8726 96.9654 98.7018 92.345 96.609 97.33 76.6761 11.2627 g 0 0 0 0 0 0 0 0 0 11.0015 3.59788 58.6906 10.5989 1.13597 1.21385 0.036062 0.311742 0 0 22.4426 0.729695 t 0 0 0 0 0 0 0 0 0 17.3611 47.619 15.3273 0.56444 4.88812 0.92824 0.504868 4.78005 2.01342 0 0.881335 3.52157

M01864_2.00_shift12 (M01864_2.00)
; oligos_6nt_mkv4_m4 versus M01864_2.00; m=59/180; ncol2=9; w=0; offset=4; strand=D; shift=12; score=0.59729; ------------CCCmCGcat ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 16.0527 1.55222 2.3878 48.8627 1.22013 16.7571 8.3944 43.7023 24.4582 c 0 0 0 0 0 0 0 0 0 0 0 0 73.3965 93.6616 88.2675 47.8952 96.4432 2.79778 59.0016 13.7001 24.704 g 0 0 0 0 0 0 0 0 0 0 0 0 4.64539 4.13583 1.01043 1.76653 0.65636 68.6365 10.4601 22.3629 19.4329 t 0 0 0 0 0 0 0 0 0 0 0 0 5.90545 0.650307 8.33424 1.47553 1.68027 11.8086 22.144 20.2347 31.4049

M07754_2.00_shift10 (ZNF468)
; oligos_6nt_mkv4_m4 versus M07754_2.00 (ZNF468); m=60/180; ncol2=12; w=0; offset=2; strand=D; shift=10; score=0.594942; ----------CrCCCCCTCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 16.3043 42.6812 0.942029 0.0724638 0.0724638 0.0724638 0.0724638 2.97101 0.0724638 0.942029 0.942029 c 0 0 0 0 0 0 0 0 0 0 77.7536 0.942029 84.7101 98.913 88.4783 99.7826 99.4928 0.0724638 99.7826 98.3333 93.4058 g 0 0 0 0 0 0 0 0 0 0 2.10145 46.1594 9.92754 0.362319 0.0724638 0.0724638 0.0724638 0.652174 0.0724638 0.362319 0.942029 t 0 0 0 0 0 0 0 0 0 0 3.84058 10.2174 4.42029 0.652174 11.3768 0.0724638 0.362319 96.3043 0.0724638 0.362319 4.71014

M00242_2.00_shift9 (KLF11)
; oligos_6nt_mkv4_m4 versus M00242_2.00 (KLF11); m=61/180; ncol2=8; w=0; offset=1; strand=D; shift=9; score=0.593635; ---------mCGCCCCC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 35.6838 0.052521 5.30462 5.30462 0.052521 0.052521 21.0609 0.0766871 0 0 0 0 c 0 0 0 0 0 0 0 0 0 64.1738 99.8424 10.5567 94.5903 94.5903 99.8424 78.834 92.1012 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0.0712251 0.052521 84.0861 0.052521 5.30462 0.052521 0.052521 0.0766871 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0.0712251 0.052521 0.052521 0.052521 0.052521 0.052521 0.052521 7.7454 0 0 0 0

M00241_2.00_shift9 (KLF11)
; oligos_6nt_mkv4_m4 versus M00241_2.00 (KLF11); m=62/180; ncol2=8; w=0; offset=1; strand=D; shift=9; score=0.589663; ---------mCGCCCCC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 38.4202 0.0499002 10.0299 5.03992 5.03992 0.0499002 25 0.0664894 0 0 0 0 c 0 0 0 0 0 0 0 0 0 61.4264 99.8503 10.0299 94.8603 89.8703 99.8503 74.9002 93.1516 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0.0766871 0.0499002 79.8902 0.0499002 5.03992 0.0499002 0.0499002 0.0664894 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0.0766871 0.0499002 0.0499002 0.0499002 0.0499002 0.0499002 0.0499002 6.71543 0 0 0 0

M08290_2.00_shift12 (MAZ)
; oligos_6nt_mkv4_m4 versus M08290_2.00 (MAZ); m=63/180; ncol2=9; w=0; offset=4; strand=D; shift=12; score=0.573649; ------------sCCCCkCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 2.21823 0.059952 0.059952 0.059952 0.059952 8.93285 0.059952 0.059952 0.059952 c 0 0 0 0 0 0 0 0 0 0 0 0 52.8177 92.1463 99.8201 99.8201 99.8201 0.059952 99.8201 99.8201 88.789 g 0 0 0 0 0 0 0 0 0 0 0 0 37.7098 0.059952 0.059952 0.059952 0.059952 35.3118 0.059952 0.059952 0.059952 t 0 0 0 0 0 0 0 0 0 0 0 0 7.2542 7.73381 0.059952 0.059952 0.059952 55.6954 0.059952 0.059952 11.0911

M08880_2.00_shift5 (KLF9)
; oligos_6nt_mkv4_m4 versus M08880_2.00 (KLF9); m=64/180; ncol2=15; w=-3; offset=-3; strand=D; shift=5; score=0.572873; -----gGcCMCGCCCmCyyc- ; cor=; Ncor= a 0 0 0 0 0 14.4531 10.9375 16.0156 1.5625 71.875 0 23.0469 0 1.5625 0 32.0312 2.73438 9.76562 9.375 11.3281 0 c 0 0 0 0 0 20.3125 3.125 67.1875 97.6562 26.1719 100 0.390625 99.2188 98.0469 98.4375 63.2812 80.0781 26.5625 46.0938 63.6719 0 g 0 0 0 0 0 52.3438 84.375 11.7188 0.390625 1.5625 0 75.7812 0.78125 0.390625 0 0.390625 1.17188 13.6719 18.75 18.75 0 t 0 0 0 0 0 12.8906 1.5625 5.07812 0.390625 0.390625 0 0.78125 0 0 1.5625 4.29688 16.0156 50 25.7812 6.25 0

M00375_2.00_shift11 (M00375_2.00)
; oligos_6nt_mkv4_m4 versus M00375_2.00; m=65/180; ncol2=9; w=0; offset=3; strand=D; shift=11; score=0.572428; -----------gCCcmCgca- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 24.3908 13.6334 2.50247 7.7362 48.4453 2.10408 20.8312 15.2373 34.2838 0 c 0 0 0 0 0 0 0 0 0 0 0 12.7331 74.6286 84.5445 67.0817 40.4649 91.2753 12.1393 46.7 21.0031 0 g 0 0 0 0 0 0 0 0 0 0 0 41.026 2.7802 9.1823 3.72814 5.15741 0.424807 48.7377 13.9258 23.919 0 t 0 0 0 0 0 0 0 0 0 0 0 21.8501 8.95779 3.77076 21.454 5.93243 6.19585 18.2918 24.1369 20.7941 0

M07780_2.00_shift8 (ZNF2)
; oligos_6nt_mkv4_m4 versus M07780_2.00 (ZNF2); m=66/180; ncol2=9; w=0; offset=0; strand=D; shift=8; score=0.567569; --------aGCGCCmcC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 62.625 0.125 0.125 17.125 0.125 0.125 31.625 0.125 0.125 0 0 0 0 c 0 0 0 0 0 0 0 0 17.125 0.125 99.625 0.125 89.125 99.625 47.125 64.125 99.625 0 0 0 0 g 0 0 0 0 0 0 0 0 14.125 99.625 0.125 82.625 10.625 0.125 18.125 12.625 0.125 0 0 0 0 t 0 0 0 0 0 0 0 0 6.125 0.125 0.125 0.125 0.125 0.125 3.125 23.125 0.125 0 0 0 0

M08884_2.00_shift7 (EGR2)
; oligos_6nt_mkv4_m4 versus M08884_2.00 (EGR2); m=67/180; ncol2=18; w=-1; offset=-1; strand=D; shift=7; score=0.56107; -------yyCCdCCCmCwCmy ; cor=; Ncor= a 0 0 0 0 0 0 0 13.6 8.2 10.8 6.2 34.6 2 6 1.8 48.6 1.4 39.6 5.6 29.6 7 c 0 0 0 0 0 0 0 56.2 50.2 78.2 87.4 2.2 91.6 89 79.4 46.2 93 4.4 76.6 45 50.6 g 0 0 0 0 0 0 0 4.8 7.4 3.4 0.6 28.2 4 1.4 0.6 1.2 2.2 19 10.2 10.4 10.4 t 0 0 0 0 0 0 0 25.4 34.2 7.6 5.8 35 2.4 3.6 18.2 4 3.4 37 7.6 15 32

M00632_2.00_shift7 (M00632_2.00)
; oligos_6nt_mkv4_m4 versus M00632_2.00; m=68/180; ncol2=10; w=-1; offset=-1; strand=D; shift=7; score=0.555145; -------aymCGCCCcy---- ; cor=; Ncor= a 0 0 0 0 0 0 0 31.043 14.1167 57.0189 0.0225276 8.58113 0.0225276 0.0225276 0.0225276 21.794 10.9058 0 0 0 0 c 0 0 0 0 0 0 0 22.9857 37.4062 42.936 99.9324 0.0225276 99.9324 99.9324 99.9324 66.7367 35.9751 0 0 0 0 g 0 0 0 0 0 0 0 22.9857 14.1167 0.0225276 0.0225276 91.3738 0.0225276 0.0225276 0.0225276 2.03687 10.9058 0 0 0 0 t 0 0 0 0 0 0 0 22.9857 34.3604 0.0225276 0.0225276 0.0225276 0.0225276 0.0225276 0.0225276 9.43238 42.2132 0 0 0 0

M00224_2.00_shift8 (KLF1)
; oligos_6nt_mkv4_m4 versus M00224_2.00 (KLF1); m=69/180; ncol2=8; w=0; offset=0; strand=D; shift=8; score=0.550738; --------ymCGCCCh----- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.124378 33.2965 0.110619 0.110619 0.110619 0.110619 0.110619 28.5511 0 0 0 0 0 c 0 0 0 0 0 0 0 0 49.8756 66.4823 99.6681 0.110619 99.6681 99.6681 99.6681 42.7557 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0.124378 0.110619 0.110619 99.6681 0.110619 0.110619 0.110619 0.142045 0 0 0 0 0 t 0 0 0 0 0 0 0 0 49.8756 0.110619 0.110619 0.110619 0.110619 0.110619 0.110619 28.5511 0 0 0 0 0

M08967_2.00_shift4 (M08967_2.00)
; oligos_6nt_mkv4_m4 versus M08967_2.00; m=70/180; ncol2=19; w=-4; offset=-4; strand=D; shift=4; score=0.548242; ----cckCCCCkCCCCCwccs ; cor=; Ncor= a 0 0 0 0 7.6 9 7.2 0.8 3.4 1.2 2.8 6 0.2 1.8 3.4 5.2 2.4 32.2 9 9 5 c 0 0 0 0 58.2 53.2 12.8 87 82.2 93.2 84.4 1.2 98 88.4 77.6 81.8 90.2 15.8 67.4 58.6 45.6 g 0 0 0 0 21 14.4 44.2 4.4 0.4 1.6 0.6 29.2 0.4 1.4 2.8 5.2 3 22 15.2 14.6 31.6 t 0 0 0 0 13.2 23.4 35.8 7.8 14 4 12.2 63.6 1.4 8.4 16.2 7.8 4.4 30 8.4 17.8 17.8

M00622_2.00_shift10 (M00622_2.00)
; oligos_6nt_mkv4_m4 versus M00622_2.00; m=71/180; ncol2=8; w=0; offset=2; strand=D; shift=10; score=0.547749; ----------CgCCCmCg--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 4.20133 13.3489 0.0302663 0.0302663 0.0302663 57.5363 0.0302663 16.6805 0 0 0 c 0 0 0 0 0 0 0 0 0 0 91.5557 23.3356 99.9092 99.9092 96.8826 33.3232 99.9092 8.36106 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0.0415973 56.6245 0.0302663 0.0302663 0.0302663 9.11017 0.0302663 66.5973 0 0 0 t 0 0 0 0 0 0 0 0 0 0 4.20133 6.69108 0.0302663 0.0302663 3.0569 0.0302663 0.0302663 8.36106 0 0 0

M00231_2.00_shift12 (EGR2)
; oligos_6nt_mkv4_m4 versus M00231_2.00 (EGR2); m=72/180; ncol2=8; w=0; offset=4; strand=D; shift=12; score=0.546206; ------------mCCmCGCa- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 36.8338 0.0120424 0.0120424 43.3646 0.0120424 10.9824 0.013151 49.0734 0 c 0 0 0 0 0 0 0 0 0 0 0 0 56.1185 99.9639 99.9639 56.6113 98.7596 2.45002 93.3851 10.9193 0 g 0 0 0 0 0 0 0 0 0 0 0 0 1.77069 0.0120424 0.0120424 0.0120424 1.21628 84.1175 0.013151 21.8205 0 t 0 0 0 0 0 0 0 0 0 0 0 0 5.277 0.0120424 0.0120424 0.0120424 0.0120424 2.45002 6.58864 18.1868 0

M08298_2.00_shift11 (KLF7)
; oligos_6nt_mkv4_m4 versus M08298_2.00 (KLF7); m=73/180; ncol2=11; w=0; offset=3; strand=D; shift=11; score=0.544022; -----------ggCcmCGCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 20.9622 15.4639 9.2784 19.9313 32.3024 0 19.244 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 20.2749 17.5258 88.6598 61.512 67.6976 100 0 100 100 100 g 0 0 0 0 0 0 0 0 0 0 0 46.7354 57.0447 0 0 0 0 80.756 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 12.0275 9.9656 2.0619 18.5567 0 0 0 0 0 0

M02892_2.00_shift9 (ZNF740)
; oligos_6nt_mkv4_m4 versus M02892_2.00 (ZNF740); m=74/180; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.538927; ---------cCCCCCCCAc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 19.8051 2.29439 1.13194 1.38249 5.04422 0.612944 0.899119 1.61807 72.652 7.5187 0 0 c 0 0 0 0 0 0 0 0 0 57.0798 95.976 96.1797 96.3843 89.0599 98.035 97.7882 91.6568 7.02739 67.8055 0 0 g 0 0 0 0 0 0 0 0 0 16.0537 0.352983 1.04351 1.08118 2.86603 0.757166 0.143859 1.1967 7.08083 3.35411 0 0 t 0 0 0 0 0 0 0 0 0 7.06142 1.37663 1.64485 1.15207 3.02981 0.594916 1.16885 5.5284 13.2398 21.3217 0 0

M00230_2.00_shift9 (EGR2)
; oligos_6nt_mkv4_m4 versus M00230_2.00 (EGR2); m=75/180; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.538904; ---------mcrCCCmccy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.4696 12.7214 30.8306 6.07116 0.756708 7.19322 39.7106 8.59421 16.1831 12.8811 0 0 c 0 0 0 0 0 0 0 0 0 37.5897 53.1588 7.45219 86.795 95.7003 69.626 41.7466 67.4299 63.6863 47.7397 0 0 g 0 0 0 0 0 0 0 0 0 12.5125 11.1706 43.7507 0.00921935 3.22593 2.41848 9.03963 6.49536 5.77749 10.1326 0 0 t 0 0 0 0 0 0 0 0 0 19.4283 22.9492 17.9665 7.12457 0.317024 20.7623 9.50311 17.4805 14.3531 29.2466 0 0

M03706_2.00_shift6 (M03706_2.00)
; oligos_6nt_mkv4_m4 versus M03706_2.00; m=76/180; ncol2=13; w=-2; offset=-2; strand=D; shift=6; score= 0.5339; ------GmCACGCCCmCyy-- ; cor=; Ncor= a 0 0 0 0 0 0 23.3211 37.4477 0.930714 69.7044 4.95466 22.5231 0.383944 1.1708 0.880339 28.9079 2.44621 18.8759 22.0495 0 0 c 0 0 0 0 0 0 4.34676 56.3408 97.5526 8.34975 91.6451 0.479945 98.7784 97.4518 92.2726 65.3429 83.407 37.5044 32.1555 0 0 g 0 0 0 0 0 0 69.1087 1.99084 0.620476 21.5025 2.16969 74.4943 0.383944 0.65427 0.945549 0.577234 0.825228 8.16543 11.6254 0 0 t 0 0 0 0 0 0 3.22344 4.22059 0.896243 0.44335 1.23057 2.50257 0.453752 0.72314 5.90153 5.17202 13.3215 35.4542 34.1696 0 0

M04514_2.00_shift6 (KLF15)
; oligos_6nt_mkv4_m4 versus M04514_2.00 (KLF15); m=77/180; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.531953; ------GCCMCGCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 0 22.0614 15.9576 2.97039 68.0475 0 8.01932 0 0 0 34.3078 3.20988 21.9548 0 0 0 c 0 0 0 0 0 0 0 81.541 87.8529 31.9525 100 0 100 100 93.6858 61.6939 75.7059 34.0573 0 0 0 g 0 0 0 0 0 0 75.7569 0 2.87204 0 0 86.2995 0 0 0 0 0.901771 12.7407 0 0 0 t 0 0 0 0 0 0 2.18166 2.50137 6.30471 0 0 5.68116 0 0 6.31424 3.99828 20.1825 31.2472 0 0 0

M08326_2.00_shift7 (SP2)
; oligos_6nt_mkv4_m4 versus M08326_2.00 (SP2); m=78/180; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score= 0.5316; -------cCCCGCCCc----- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.083612 6.77258 2.42475 0.083612 6.43813 0.083612 0.083612 0.083612 22.4916 0 0 0 0 0 c 0 0 0 0 0 0 0 63.6288 74.3311 97.408 99.7492 0.083612 99.7492 99.7492 99.7492 64.9666 0 0 0 0 0 g 0 0 0 0 0 0 0 14.7993 0.083612 0.083612 0.083612 93.3946 0.083612 0.083612 0.083612 1.08696 0 0 0 0 0 t 0 0 0 0 0 0 0 21.4883 18.8127 0.083612 0.083612 0.083612 0.083612 0.083612 0.083612 11.4548 0 0 0 0 0

M08296_2.00_shift9 (SP4)
; oligos_6nt_mkv4_m4 versus M08296_2.00 (SP4); m=79/180; ncol2=15; w=0; offset=1; strand=D; shift=9; score=0.528925; ---------yhgGCyCCgCCY ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 15.7895 32.5911 24.2915 11.5385 1.8219 5.2632 12.1457 0 12.5506 0.2024 0 0 c 0 0 0 0 0 0 0 0 0 42.5101 26.5182 18.8259 11.1336 75.9109 56.2753 83.4008 98.583 0 99.7976 99.7976 68.6235 g 0 0 0 0 0 0 0 0 0 12.9555 14.9798 48.583 69.8381 7.085 3.4413 2.6316 1.417 67.6113 0 0 1.0121 t 0 0 0 0 0 0 0 0 0 28.7449 25.9109 8.2996 7.4899 15.1822 35.0202 1.8219 0 19.8381 0 0.2024 30.3644

M04512_2.00_shift6 (KLF15)
; oligos_6nt_mkv4_m4 versus M04512_2.00 (KLF15); m=80/180; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.527851; ------rCCmCGCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 0 26.7918 15.1634 5.5098 65.5063 0.240964 13.6948 0.359368 0.120627 0.406939 26.0445 5.30621 13.4058 0 0 0 c 0 0 0 0 0 0 10.7319 70.854 81.1765 31.3766 99.759 1.54364 99.1854 99.8794 88.67 61.7603 71.1917 50.8454 0 0 0 g 0 0 0 0 0 0 51.6875 5.57933 9.43137 2.19937 0 81.9315 0.167705 0 0.321268 0.487805 3.16162 10.5556 0 0 0 t 0 0 0 0 0 0 10.7888 8.40322 3.88235 0.917722 0 2.83 0.287494 0 10.6018 11.7073 20.3405 25.1932 0 0 0

M00226_2.00_shift8 (KLF1)
; oligos_6nt_mkv4_m4 versus M00226_2.00 (KLF1); m=81/180; ncol2=8; w=0; offset=0; strand=D; shift=8; score=0.527731; --------CmCGCCCm----- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 8.36106 40.6055 0.0302663 21.2167 0.0302663 0.0302663 0.0302663 52.1267 0 0 0 0 0 c 0 0 0 0 0 0 0 0 74.9168 59.3321 96.8826 3.0569 99.9092 99.9092 99.9092 30.4253 0 0 0 0 0 g 0 0 0 0 0 0 0 0 4.20133 0.031211 3.0569 75.6961 0.0302663 0.0302663 0.0302663 4.38368 0 0 0 0 0 t 0 0 0 0 0 0 0 0 12.5208 0.031211 0.0302663 0.0302663 0.0302663 0.0302663 0.0302663 13.0642 0 0 0 0 0

M07929_2.00_shift0 (EGR1)
; oligos_6nt_mkv4_m4 versus M07929_2.00 (EGR1); m=82/180; ncol2=20; w=-8; offset=-8; strand=D; shift=0; score=0.526097; ccsccssccCCGCCCmCGCm- ; cor=; Ncor= a 13.9394 15.1515 12.7273 16.9697 17.1717 18.1818 10.101 16.9697 13.5354 18.3838 0.404 19.798 0 0 0 51.5151 0 7.0707 0 40.6061 0 c 46.2626 45.6566 46.0606 44.2424 48.2828 35.5556 48.8889 44.4444 40 73.9394 97.9798 0 100 99.798 95.1515 47.6768 99.798 0.6061 90.3031 29.2929 0 g 24.4444 22.6263 25.6566 23.0303 17.7778 29.4949 25.0505 18.7879 21.6162 0.8081 0 69.6969 0 0.202 0 0.808099 0.202 80.202 4.2424 17.1717 0 t 15.3535 16.5657 15.5556 15.7576 16.7677 16.7677 15.9596 19.798 24.8485 6.8687 1.6162 10.5051 0 0 4.8485 0 0 12.1212 5.45451 12.9293 0

M08978_2.00_shift1 (M08978_2.00)
; oligos_6nt_mkv4_m4 versus M08978_2.00; m=83/180; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.524976; -cscysgCCCCgCCCccyccc ; cor=; Ncor= a 0 12.6205 11.5512 11.6114 15.9639 20.5271 9.27711 3.70482 5.63253 10.6325 3.10241 8.73494 0.451807 0.993976 0.421687 16.5964 7.37952 11.5211 11.2952 13.1175 14.7364 c 0 44.9849 45.5572 51.5813 44.9849 31.5512 23.9157 73.4639 71.9277 87.1687 89.0211 5.06024 96.6265 97.741 85.4819 63.8253 55.4669 38.9307 43.9006 47.4849 41.8599 g 0 24.1867 26.506 16.747 13.2982 36.7169 55.3916 13.3133 3.49398 1.4759 3.43373 62.756 1.95783 1.0241 0.240964 7.5 19.9699 21.9277 22.003 21.8373 22.6431 t 0 18.2078 16.3855 20.0602 25.753 11.2048 11.4157 9.51807 18.9458 0.722892 4.44277 23.4488 0.963855 0.240964 13.8554 12.0783 17.1837 27.6205 22.8012 17.5602 20.7605

M08920_2.00_shift1 (SP3,SP6)
; oligos_6nt_mkv4_m4 versus M08920_2.00 (SP3,SP6); m=84/180; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.524976; -cscysgCCCCgCCCccyccc ; cor=; Ncor= a 0 12.6205 11.5512 11.6114 15.9639 20.5271 9.27711 3.70482 5.63253 10.6325 3.10241 8.73494 0.451807 0.993976 0.421687 16.5964 7.37952 11.5211 11.2952 13.1175 14.7364 c 0 44.9849 45.5572 51.5813 44.9849 31.5512 23.9157 73.4639 71.9277 87.1687 89.0211 5.06024 96.6265 97.741 85.4819 63.8253 55.4669 38.9307 43.9006 47.4849 41.8599 g 0 24.1867 26.506 16.747 13.2982 36.7169 55.3916 13.3133 3.49398 1.4759 3.43373 62.756 1.95783 1.0241 0.240964 7.5 19.9699 21.9277 22.003 21.8373 22.6431 t 0 18.2078 16.3855 20.0602 25.753 11.2048 11.4157 9.51807 18.9458 0.722892 4.44277 23.4488 0.963855 0.240964 13.8554 12.0783 17.1837 27.6205 22.8012 17.5602 20.7605

M08287_2.00_shift13 (PATZ1)
; oligos_6nt_mkv4_m4 versus M08287_2.00 (PATZ1); m=85/180; ncol2=8; w=0; offset=5; strand=D; shift=13; score=0.524807; -------------CCCCkCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.7333 0 0 22.1333 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 94.1333 81.0667 100 100 0 100 100 84 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35.2 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 5.8667 11.2 0 0 42.6667 0 0 16

M08398_2.00_shift5 (KLF14)
; oligos_6nt_mkv4_m4 versus M08398_2.00 (KLF14); m=86/180; ncol2=14; w=-3; offset=-3; strand=D; shift=5; score=0.523092; -----ggcCmCGCCCmCyy-- ; cor=; Ncor= a 0 0 0 0 0 22.5873 11.9097 9.2402 4.3121 37.7823 0 13.963 0 0 0 41.6838 2.6694 13.347 13.7577 0 0 c 0 0 0 0 0 13.7577 14.5791 60.9856 79.4661 61.3963 99.5893 0 100 100 92.4025 49.076 74.1273 45.9959 34.7023 0 0 g 0 0 0 0 0 57.2895 67.3511 7.3922 4.3121 0.8214 0 77.2074 0 0 0 0.8214 4.7228 8.0082 20.1232 0 0 t 0 0 0 0 0 6.3655 6.1602 22.3819 11.9097 0 0.4107 8.8296 0 0 7.5975 8.4189 18.4805 32.6489 31.4168 0 0

M02888_2.00_shift6 (KLF16)
; oligos_6nt_mkv4_m4 versus M02888_2.00 (KLF16); m=87/180; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.520123; ------gmCMCgCCCMC---- ; cor=; Ncor= a 0 0 0 0 0 0 21.8146 33.2964 3.5942 69.9939 3.85064 18.5102 0.493827 0.123305 0.925926 26.152 1.57094 0 0 0 0 c 0 0 0 0 0 0 17.5237 59.5713 93.4493 28.0584 94.049 6.4432 99.5062 99.3835 93.287 70.3172 79.136 0 0 0 0 g 0 0 0 0 0 0 52.8005 2.84553 0.347826 1.94766 0.991832 60.0372 0 0.493218 0.173611 1.13704 1.12911 0 0 0 0 t 0 0 0 0 0 0 7.86112 4.28677 2.6087 0 1.10852 15.0093 0 0 5.61343 2.39378 18.164 0 0 0 0

M08096_2.00_shift6 (SP1)
; oligos_6nt_mkv4_m4 versus M08096_2.00 (SP1); m=88/180; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.519782; ------gCCCCkCCCCy---- ; cor=; Ncor= a 0 0 0 0 0 0 9.81223 0 1.1335 0 0 15.5599 0 0 0 12.0678 7.46508 0 0 0 0 c 0 0 0 0 0 0 20.4488 71.1587 76.746 100 99.1642 0 100 100 76.4713 72.7845 56.8926 0 0 0 0 g 0 0 0 0 0 0 48.9008 7.35058 0 0 0 52.9425 0 0 0 0 8.40394 0 0 0 0 t 0 0 0 0 0 0 20.8381 21.4907 22.1204 0 0.835814 31.4976 0 0 23.5287 15.1477 27.2384 0 0 0 0

M10300_2.00_shift5 (SP1)
; oligos_6nt_mkv4_m4 versus M10300_2.00 (SP1); m=89/180; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.512262; -----vrcCCCGCCCccy--- ; cor=; Ncor= a 0 0 0 0 0 25 26.8519 8.33333 5.55556 7.40741 1.85185 8.33333 0 0 0.925926 17.5926 7.40741 18.5185 0 0 0 c 0 0 0 0 0 29.6296 19.4444 66.6667 70.3704 91.6667 91.6667 0 98.1481 100 82.4074 60.1852 51.8519 32.4074 0 0 0 g 0 0 0 0 0 37.037 50.9259 9.25926 4.62963 0.925926 4.62963 74.0741 1.85185 0 0.925926 9.25926 18.5185 19.4444 0 0 0 t 0 0 0 0 0 8.33333 2.77778 15.7407 19.4444 0 1.85185 17.5926 0 0 15.7407 12.963 22.2222 29.6296 0 0 0

M08982_2.00_shift8 (M08982_2.00)
; oligos_6nt_mkv4_m4 versus M08982_2.00; m=90/180; ncol2=19; w=0; offset=0; strand=D; shift=8; score=0.511352; --------cccrgCCCCrCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 13.8554 13.4538 16.8675 27.3092 14.8594 7.02811 4.21687 24.498 0.401606 27.1084 0.200803 0.200803 0 c 0 0 0 0 0 0 0 0 48.1928 53.012 49.5984 16.2651 14.8594 84.3373 75.502 72.49 98.1928 0 98.5944 99.1968 96.5863 g 0 0 0 0 0 0 0 0 21.8876 24.2972 20.4819 38.1526 61.8474 1.00402 1.80723 2.61044 0.60241 64.257 0.803213 0 0 t 0 0 0 0 0 0 0 0 16.0643 9.23695 13.0522 18.2731 8.43373 7.63052 18.4739 0.401606 0.803213 8.63454 0.401606 0.60241 3.41365

M08876_2.00_shift8 (KLF3)
; oligos_6nt_mkv4_m4 versus M08876_2.00 (KLF3); m=91/180; ncol2=19; w=0; offset=0; strand=D; shift=8; score=0.511352; --------cccrgCCCCrCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 13.8554 13.4538 16.8675 27.3092 14.8594 7.02811 4.21687 24.498 0.401606 27.1084 0.200803 0.200803 0 c 0 0 0 0 0 0 0 0 48.1928 53.012 49.5984 16.2651 14.8594 84.3373 75.502 72.49 98.1928 0 98.5944 99.1968 96.5863 g 0 0 0 0 0 0 0 0 21.8876 24.2972 20.4819 38.1526 61.8474 1.00402 1.80723 2.61044 0.60241 64.257 0.803213 0 0 t 0 0 0 0 0 0 0 0 16.0643 9.23695 13.0522 18.2731 8.43373 7.63052 18.4739 0.401606 0.803213 8.63454 0.401606 0.60241 3.41365

M04511_2.00_shift6 (KLF15)
; oligos_6nt_mkv4_m4 versus M04511_2.00 (KLF15); m=92/180; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.509743; ------vccmCgCCCmcc--- ; cor=; Ncor= a 0 0 0 0 0 0 29.0396 21.2916 15.9457 54.3609 0 19.6352 0.665188 3.79702 1.63279 36.4374 11.0315 17.5305 0 0 0 c 0 0 0 0 0 0 25.3811 52.9566 65.996 34.7006 96.8981 23.1277 96.9697 93.1157 87.4375 48.7021 64.9423 48.3232 0 0 0 g 0 0 0 0 0 0 34.4893 12.1695 5.5332 3.43899 0 50.9119 0.406504 2.37757 2.53249 4.34783 7.1985 12.5381 0 0 0 t 0 0 0 0 0 0 11.0899 13.5822 12.5252 7.49948 3.10192 6.32518 1.95861 0.709723 8.3972 10.5127 16.8277 21.6082 0 0 0

M06118_2.00_shift5 (SP6)
; oligos_6nt_mkv4_m4 versus M06118_2.00 (SP6); m=93/180; ncol2=14; w=-3; offset=-3; strand=D; shift=5; score=0.509235; -----ggycmCGCCCmcyy-- ; cor=; Ncor= a 0 0 0 0 0 18.1996 12.1429 16.1458 15.9722 51.0417 2.60417 6.77083 1.21528 1.73611 1.5625 47.0486 10.2431 13.1944 13.0742 0 0 c 0 0 0 0 0 17.4168 5.35714 45.1389 58.8542 48.7847 96.875 0 98.7847 97.7431 85.7639 41.1458 61.8056 31.25 30.9187 0 0 g 0 0 0 0 0 45.4012 65.8929 11.4583 2.77778 0.173611 0 88.5417 0 0 0 0.347222 5.72917 12.8472 24.735 0 0 t 0 0 0 0 0 18.9824 16.6071 27.2569 22.3958 0 0.520833 4.6875 0 0.520833 12.6736 11.4583 22.2222 42.7083 31.2721 0 0

M04456_2.00_shift11 (KLF2)
; oligos_6nt_mkv4_m4 versus M04456_2.00 (KLF2); m=94/180; ncol2=11; w=0; offset=3; strand=D; shift=11; score=0.505551; -----------srCCmCrCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 21.2044 38.0149 6.81334 0.934809 48.188 0 37.9653 0 1.70501 0 c 0 0 0 0 0 0 0 0 0 0 0 34.4925 19.6371 83.6764 87.0111 42.1117 100 1.9024 99.2424 95.724 90.5994 g 0 0 0 0 0 0 0 0 0 0 0 26.4348 37.46 6.52945 10.9717 6.82561 0 59.5533 0.701459 2.24628 3.61168 t 0 0 0 0 0 0 0 0 0 0 0 17.8682 4.88794 2.98084 1.08241 2.87466 0 0.578991 0.0561167 0.324763 5.78893

M04517_2.00_shift6 (SP6,SP8)
; oligos_6nt_mkv4_m4 versus M04517_2.00 (SP6,SP8); m=95/180; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.503914; ------rcCMCGCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 0 34.3794 20.4684 8.29254 69.9729 0.139373 7.67123 0.209278 0.209497 0.0941029 44.6849 7.16262 22.426 0 0 0 c 0 0 0 0 0 0 15.2327 57.7597 81.6585 27.8559 98.8153 2.86149 98.9187 99.0223 88.9586 44.2458 66.7384 38.3639 0 0 0 g 0 0 0 0 0 0 37.4824 9.47047 0.950187 0.542808 0.278746 86.3318 0 0.628492 1.12923 0.627156 5.68706 9.69676 0 0 0 t 0 0 0 0 0 0 12.9055 12.3014 9.09876 1.62842 0.766551 3.13546 0.871992 0.139665 9.81807 10.4421 20.4119 29.5134 0 0 0

M06117_2.00_shift6 (SP6)
; oligos_6nt_mkv4_m4 versus M06117_2.00 (SP6); m=96/180; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.50368; ------gmymCGCCCmc---- ; cor=; Ncor= a 0 0 0 0 0 0 18.1818 27.2727 0 54.5455 0 4.54545 4.54545 0 0 54.5455 4.54545 0 0 0 0 c 0 0 0 0 0 0 4.54545 45.4545 59.0909 45.4545 100 0 95.4545 100 86.3636 31.8182 63.6364 0 0 0 0 g 0 0 0 0 0 0 59.0909 9.09091 0 0 0 86.3636 0 0 0 0 13.6364 0 0 0 0 t 0 0 0 0 0 0 18.1818 18.1818 40.9091 0 0 9.09091 0 0 13.6364 13.6364 18.1818 0 0 0 0

M08962_2.00_shift6 (M08962_2.00)
; oligos_6nt_mkv4_m4 versus M08962_2.00; m=97/180; ncol2=19; w=-2; offset=-2; strand=D; shift=6; score=0.503338; ------yyccmdgCCMCdCCC ; cor=; Ncor= a 0 0 0 0 0 0 5.24194 10.6855 6.45161 11.6935 25.8065 25 10.8871 4.6371 4.23387 26.0081 2.21774 28.2258 1.20968 2.01613 13.1048 c 0 0 0 0 0 0 45.5645 43.3468 60.2823 60.8871 52.2177 13.7097 20.7661 83.6694 68.3468 68.9516 85.4839 0 89.1129 95.5645 81.4516 g 0 0 0 0 0 0 23.3871 11.0887 17.1371 12.7016 15.7258 31.8548 45.3629 3.02419 6.45161 2.21774 0.604839 45.7661 5.24194 0 0.604839 t 0 0 0 0 0 0 25.8065 34.879 16.129 14.7177 6.25 29.4355 22.9839 8.66935 20.9677 2.82258 11.6935 26.0081 4.43548 2.41935 4.83871

M08857_2.00_shift6 (KLF6)
; oligos_6nt_mkv4_m4 versus M08857_2.00 (KLF6); m=98/180; ncol2=19; w=-2; offset=-2; strand=D; shift=6; score=0.503338; ------yyccmdgCCMCdCCC ; cor=; Ncor= a 0 0 0 0 0 0 5.24194 10.6855 6.45161 11.6935 25.8065 25 10.8871 4.6371 4.23387 26.0081 2.21774 28.2258 1.20968 2.01613 13.1048 c 0 0 0 0 0 0 45.5645 43.3468 60.2823 60.8871 52.2177 13.7097 20.7661 83.6694 68.3468 68.9516 85.4839 0 89.1129 95.5645 81.4516 g 0 0 0 0 0 0 23.3871 11.0887 17.1371 12.7016 15.7258 31.8548 45.3629 3.02419 6.45161 2.21774 0.604839 45.7661 5.24194 0 0.604839 t 0 0 0 0 0 0 25.8065 34.879 16.129 14.7177 6.25 29.4355 22.9839 8.66935 20.9677 2.82258 11.6935 26.0081 4.43548 2.41935 4.83871

M04645_2.00_shift6 (SP6,SP9)
; oligos_6nt_mkv4_m4 versus M04645_2.00 (SP6,SP9); m=99/180; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.502868; ------rcCmCGCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 0 34.0131 14.7242 10.1294 65.7105 0.0806777 6.95222 0.8846 0 1.33288 41.9423 6.64311 17.1359 0 0 0 c 0 0 0 0 0 0 17.9445 63.7617 77.343 30.2145 98.8705 6.58979 98.5525 98.7908 83.7662 44.2998 65.8304 47.6132 0 0 0 g 0 0 0 0 0 0 38.8254 8.0385 3.56579 1.50134 0.68576 80.7578 0 0 0.820232 1.33709 6.74912 8.32313 0 0 0 t 0 0 0 0 0 0 9.21697 13.4755 8.96182 2.57373 0.36305 5.70016 0.562927 1.20919 14.0807 12.4208 20.7774 26.9278 0 0 0

M02921_2.00_shift6 (SP1)
; oligos_6nt_mkv4_m4 versus M02921_2.00 (SP1); m=100/180; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.501084; ------rCCmCrCCCmc---- ; cor=; Ncor= a 0 0 0 0 0 0 46.3014 19.2941 6.62971 47.0964 0.606612 30.0733 0 0.183038 0.127065 38.9714 17.6778 0 0 0 0 c 0 0 0 0 0 0 2.23634 70.7016 75.4216 47.7062 99.0294 0.867355 99.6642 99.6034 82.9733 47.5875 51.7187 0 0 0 0 g 0 0 0 0 0 0 43.205 3.37809 1.8711 4.96516 0.181984 48.8261 0.030525 0.0610128 0 1.56416 10.4546 0 0 0 0 t 0 0 0 0 0 0 8.25724 6.62625 16.0776 0.232288 0.181984 20.2333 0.30525 0.152532 16.8996 11.877 20.1489 0 0 0 0

M04513_2.00_shift6 (KLF15)
; oligos_6nt_mkv4_m4 versus M04513_2.00 (KLF15); m=101/180; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.49812; ------rcCmCrCCCmcc--- ; cor=; Ncor= a 0 0 0 0 0 0 28.524 19.4706 14.8438 61.7341 3.34436 26.8483 3.79323 5.3418 6.84564 33.1376 11.742 21.0788 0 0 0 c 0 0 0 0 0 0 15.5473 63.1813 75.3437 31.1753 88.6071 11.12 89.6616 90.0635 80.906 55.3028 67.6831 45.1452 0 0 0 g 0 0 0 0 0 0 49.5025 6.36792 2.3125 3.19846 1.94781 48.307 1.3016 2.24131 4.83221 2.89908 3.75044 9.50207 0 0 0 t 0 0 0 0 0 0 6.4262 10.9801 7.5 3.8921 6.1007 13.7247 5.24358 2.35338 7.41611 8.66055 16.8244 24.2739 0 0 0

M08879_2.00_shift6 (KLF12)
; oligos_6nt_mkv4_m4 versus M08879_2.00 (KLF12); m=102/180; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.496762; ------GCCCCGCCCck---- ; cor=; Ncor= a 0 0 0 0 0 0 3.9823 1.54867 3.9823 19.469 1.54867 2.87611 0 0.221239 0.442478 13.9381 8.40708 0 0 0 0 c 0 0 0 0 0 0 2.87611 96.4602 86.2832 79.2035 96.0177 0.221239 100 99.5575 93.1416 58.1858 19.469 0 0 0 0 g 0 0 0 0 0 0 80.0885 0.663717 0 0.884956 0.221239 87.8319 0 0.221239 0 3.09735 34.292 0 0 0 0 t 0 0 0 0 0 0 13.0531 1.32743 9.73451 0.442478 2.21239 9.0708 0 0 6.41593 24.7788 37.8319 0 0 0 0

M08991_2.00_shift9 (M08991_2.00)
; oligos_6nt_mkv4_m4 versus M08991_2.00; m=103/180; ncol2=9; w=0; offset=1; strand=D; shift=9; score=0.492611; ---------rmGmCCCyc--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 26 47.2 0.8 58.4 0.2 0 4.4 0.6 10.6 0 0 0 c 0 0 0 0 0 0 0 0 0 23.2 33.4 0.2 40.4 99 99.8 93.6 60.6 42.8 0 0 0 g 0 0 0 0 0 0 0 0 0 49.8 17.4 98.8 0 0.2 0 0 0.6 22.6 0 0 0 t 0 0 0 0 0 0 0 0 0 1 2 0.2 1.2 0.6 0.2 2 38.2 24 0 0 0

M08926_2.00_shift9 (ZBTB7A)
; oligos_6nt_mkv4_m4 versus M08926_2.00 (ZBTB7A); m=104/180; ncol2=9; w=0; offset=1; strand=D; shift=9; score=0.492611; ---------rmGmCCCyc--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 26 47.2 0.8 58.4 0.2 0 4.4 0.6 10.6 0 0 0 c 0 0 0 0 0 0 0 0 0 23.2 33.4 0.2 40.4 99 99.8 93.6 60.6 42.8 0 0 0 g 0 0 0 0 0 0 0 0 0 49.8 17.4 98.8 0 0.2 0 0 0.6 22.6 0 0 0 t 0 0 0 0 0 0 0 0 0 1 2 0.2 1.2 0.6 0.2 2 38.2 24 0 0 0

M04518_2.00_shift6 (SP6,SP8)
; oligos_6nt_mkv4_m4 versus M04518_2.00 (SP6,SP8); m=105/180; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.49252; ------rcCACGCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 0 28.6296 24.4087 12.157 82.827 0 6.50407 0 0 0.384123 42.989 10.6603 18.6959 0 0 0 c 0 0 0 0 0 0 10.7998 49.3961 68.1834 16.2447 100 0 99.6953 99.5941 83.7815 43.2967 62.1925 41.0087 0 0 0 g 0 0 0 0 0 0 48.4972 9.1847 10.1077 0 0 88.6631 0 0.405885 0.810926 0.659341 4.57488 11.6658 0 0 0 t 0 0 0 0 0 0 12.0734 17.0106 9.55193 0.92827 0 4.83288 0.304723 0 15.0235 13.0549 22.5723 28.6296 0 0 0

M08968_2.00_shift1 (M08968_2.00)
; oligos_6nt_mkv4_m4 versus M08968_2.00; m=106/180; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.492455; -CycCycCyCCTCCYyCbCcy ; cor=; Ncor= a 0 2.6 5 3.8 6 9.2 5.6 1.2 3.8 4.4 1 2.2 0 1.2 0.8 6.2 1.4 14.6 3.8 7 7.2 c 0 68 47.2 67.4 75.2 38.8 51.6 71.4 38.6 90.8 97 0.4 97.2 95.6 71.4 59.6 80.4 27.6 76.2 56 51.4 g 0 8 10.8 9.4 6.8 21.4 18.6 3.6 10 1.2 0.8 14.8 1.6 2.6 2.6 5.2 8.4 30.4 11.2 16 10.2 t 0 21.4 37 19.4 12 30.6 24.2 23.8 47.6 3.6 1.2 82.6 1.2 0.6 25.2 29 9.8 27.4 8.8 21 31.2

M08937_2.00_shift1 (WT1)
; oligos_6nt_mkv4_m4 versus M08937_2.00 (WT1); m=107/180; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.492455; -CycCycCyCCTCCYyCbCcy ; cor=; Ncor= a 0 2.6 5 3.8 6 9.2 5.6 1.2 3.8 4.4 1 2.2 0 1.2 0.8 6.2 1.4 14.6 3.8 7 7.2 c 0 68 47.2 67.4 75.2 38.8 51.6 71.4 38.6 90.8 97 0.4 97.2 95.6 71.4 59.6 80.4 27.6 76.2 56 51.4 g 0 8 10.8 9.4 6.8 21.4 18.6 3.6 10 1.2 0.8 14.8 1.6 2.6 2.6 5.2 8.4 30.4 11.2 16 10.2 t 0 21.4 37 19.4 12 30.6 24.2 23.8 47.6 3.6 1.2 82.6 1.2 0.6 25.2 29 9.8 27.4 8.8 21 31.2

M04510_2.00_shift6 (ZNF281)
; oligos_6nt_mkv4_m4 versus M04510_2.00 (ZNF281); m=108/180; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.491361; ------rCCCmTCCCCCr--- ; cor=; Ncor= a 0 0 0 0 0 0 26.988 15.4793 12.0417 1.77179 33.1018 15.3637 4.31528 5.19077 15.1746 16.4008 6.88917 27.1103 0 0 0 c 0 0 0 0 0 0 6.55738 70.9328 80.4375 96.1729 59.0519 0.0777907 89.432 89.8181 71.7682 69.4927 86.564 11.3775 0 0 0 g 0 0 0 0 0 0 58.4781 7.34484 3.875 1.25207 4.72007 6.06768 3.941 3.54925 7.16939 6.30937 2.48181 49.3761 0 0 0 t 0 0 0 0 0 0 7.97651 6.24311 3.64583 0.803213 3.12628 78.4909 2.31176 1.44188 5.88782 7.7971 4.06504 12.136 0 0 0

M01967_2.00_rc_shift12 (M01967_2.00_rc)
; oligos_6nt_mkv4_m4 versus M01967_2.00_rc; m=109/180; ncol2=10; w=0; offset=4; strand=R; shift=12; score=0.49013; ------------wscsCGCsa ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 34.7822 24.5367 22.145 0.623559 0 0.0420779 0 3.93797 41.5048 c 0 0 0 0 0 0 0 0 0 0 0 0 17.2723 26.5803 52.858 60.2009 99.9657 0.0049014 83.1039 54.6344 20.8178 g 0 0 0 0 0 0 0 0 0 0 0 0 22.1781 28.7941 23.9894 39.1613 0.000330411 99.6602 16.2825 31.8381 23.0073 t 0 0 0 0 0 0 0 0 0 0 0 0 25.7673 20.0889 1.00764 0.0142313 0.0280106 0.292809 0.612682 9.58946 14.6701

M04883_2.00_rc_shift12 (GCM1_rc)
; oligos_6nt_mkv4_m4 versus M04883_2.00_rc (GCM1_rc); m=110/180; ncol2=9; w=0; offset=4; strand=R; shift=12; score=0.48725; ------------yaCCCgCAy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 11.0903 52.4494 3.34873 7.45679 15.0973 9.88885 0 80.3804 0 c 0 0 0 0 0 0 0 0 0 0 0 0 46.9782 16.4272 92.7252 79.3086 84.4819 18.6662 81.1931 14.5145 42.732 g 0 0 0 0 0 0 0 0 0 0 0 0 14.9533 19.6604 0.866051 7.7037 0 61.5562 1.11223 3.2032 6.24635 t 0 0 0 0 0 0 0 0 0 0 0 0 26.9782 11.4631 3.06005 5.53086 0.420831 9.88885 17.6946 1.9019 51.0216

M00223_2.00_shift8 (KLF1)
; oligos_6nt_mkv4_m4 versus M00223_2.00 (KLF1); m=111/180; ncol2=9; w=0; offset=0; strand=D; shift=8; score=0.485519; --------wwybmCCCC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.7492 26.1893 24.8111 20.2632 32.7309 7.58489 13.0131 16.1177 2.67489 0 0 0 0 c 0 0 0 0 0 0 0 0 24.0083 24.9121 25.3123 28.4688 30.2144 70.5385 84.4328 79.037 78.5636 0 0 0 0 g 0 0 0 0 0 0 0 0 24.4933 23.2279 24.5642 25.2495 23.0651 0.417345 1.38535 4.22034 1.05539 0 0 0 0 t 0 0 0 0 0 0 0 0 25.7492 25.6707 25.3123 26.0185 13.9897 21.4593 1.16877 0.62495 17.7061 0 0 0 0

M00232_2.00_shift7 (EGR2)
; oligos_6nt_mkv4_m4 versus M00232_2.00 (EGR2); m=112/180; ncol2=10; w=-1; offset=-1; strand=D; shift=7; score=0.485344; -------hymCGCCChw---- ; cor=; Ncor= a 0 0 0 0 0 0 0 26.4929 23.7216 41.6576 1.19466 19.711 0.023716 2.89133 2.95969 28.9816 30.3556 0 0 0 0 c 0 0 0 0 0 0 0 26.2293 30.1561 45.1271 88.9307 0.0573363 98.3364 95.7476 72.6087 25.7044 19.163 0 0 0 0 g 0 0 0 0 0 0 0 17.4071 11.7798 4.01277 0.0208137 73.0525 0.0101366 0.853607 0.0193529 12.6374 21.6062 0 0 0 0 t 0 0 0 0 0 0 0 29.8707 34.3426 9.20257 9.85381 7.17913 1.6297 0.507487 24.4122 32.6766 28.8752 0 0 0 0

M09041_2.00_rc_shift11 (M09041_2.00_rc)
; oligos_6nt_mkv4_m4 versus M09041_2.00_rc; m=113/180; ncol2=12; w=0; offset=3; strand=R; shift=11; score=0.485169; -----------ykyCCCGCCc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 14 4.8 1.4 0 2 3.4 5.6 0.4 1.2 16.2 c 0 0 0 0 0 0 0 0 0 0 0 30.2 16.4 37 96.2 88.4 93.4 0.4 97.4 82.6 64.4 g 0 0 0 0 0 0 0 0 0 0 0 20.2 28.2 4.2 1.6 1.8 0.8 92.4 0.8 10.4 2.4 t 0 0 0 0 0 0 0 0 0 0 0 35.6 50.6 57.4 2.2 7.8 2.4 1.6 1.4 5.8 17

M09505_2.00_shift12 (MAZ)
; oligos_6nt_mkv4_m4 versus M09505_2.00 (MAZ); m=114/180; ncol2=8; w=0; offset=4; strand=D; shift=12; score=0.483294; ------------CCCCcCCC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0.1 0.1 0.1 5.4 8.4 0.1 0.1 0 c 0 0 0 0 0 0 0 0 0 0 0 0 99.7 95.6 89.4 84.8 60.7 70.2 99.7 98.9 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0.1 5.8 6.1 14.9 8.2 0.1 0.1 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0.1 4.2 4.7 9 19 13.2 0.1 0.9 0

M08970_2.00_shift0 (M08970_2.00)
; oligos_6nt_mkv4_m4 versus M08970_2.00; m=115/180; ncol2=22; w=-8; offset=-8; strand=D; shift=0; score=0.483178; scsccggcCCCGCCyCcyssc ; cor=; Ncor= a 5.59912 7.4692 9.40045 10.683 21.5907 20.8381 7.28292 1.99321 2.77539 3.27319 5.0971 5.40346 1.00615 3.93614 1.86169 9.81341 6.78515 10.5576 10.6237 6.24231 5.09449 c 49.492 58.9305 46.6039 52.6531 39.2593 23.3438 21.865 58.1706 78.6049 93.459 90.0299 1.28031 95.6927 91.8605 63.0486 70.6115 65.6845 38.4353 42.0573 50.4652 52.2944 g 32.6366 18.5491 25.794 23.6977 19.0192 50.8124 60.4696 17.7575 8.68857 2.01296 1.63721 88.9741 2.0841 0.424065 5.48717 5.57475 10.0101 22.2099 31.8687 28.2179 24.6121 t 12.2723 15.0512 18.2017 12.9662 20.1308 5.00571 10.3825 22.0787 9.93112 1.25486 3.23577 4.34209 1.21706 3.77932 29.6025 14.0003 17.5203 28.7972 15.4503 15.0745 17.999

M08911_2.00_shift0 (SP2)
; oligos_6nt_mkv4_m4 versus M08911_2.00 (SP2); m=116/180; ncol2=22; w=-8; offset=-8; strand=D; shift=0; score=0.483178; scsccggcCCCGCCyCcyssc ; cor=; Ncor= a 5.59912 7.4692 9.40045 10.683 21.5907 20.8381 7.28292 1.99321 2.77539 3.27319 5.0971 5.40346 1.00615 3.93614 1.86169 9.81341 6.78515 10.5576 10.6237 6.24231 5.09449 c 49.492 58.9305 46.6039 52.6531 39.2593 23.3438 21.865 58.1706 78.6049 93.459 90.0299 1.28031 95.6927 91.8605 63.0486 70.6115 65.6845 38.4353 42.0573 50.4652 52.2944 g 32.6366 18.5491 25.794 23.6977 19.0192 50.8124 60.4696 17.7575 8.68857 2.01296 1.63721 88.9741 2.0841 0.424065 5.48717 5.57475 10.0101 22.2099 31.8687 28.2179 24.6121 t 12.2723 15.0512 18.2017 12.9662 20.1308 5.00571 10.3825 22.0787 9.93112 1.25486 3.23577 4.34209 1.21706 3.77932 29.6025 14.0003 17.5203 28.7972 15.4503 15.0745 17.999

M00617_2.00_shift7 (M00617_2.00)
; oligos_6nt_mkv4_m4 versus M00617_2.00; m=117/180; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.479628; -------ccmCGCCCw----- ; cor=; Ncor= a 0 0 0 0 0 0 0 23.489 19.4417 52.2892 0.827505 19.3067 3.00723e-10 0.283087 0.101233 35.4676 0 0 0 0 0 c 0 0 0 0 0 0 0 38.3414 47.819 36.118 98.5594 3.09116e-07 99.9999 99.2854 80.6139 23.3039 0 0 0 0 0 g 0 0 0 0 0 0 0 14.6807 9.46331 5.97026 6.91425e-05 72.9993 3.40174e-19 0.430847 0.375188 8.48772 0 0 0 0 0 t 0 0 0 0 0 0 0 23.489 23.276 5.62258 0.61303 7.69407 0 0 18.9096 32.7408 0 0 0 0 0

M02910_2.00_shift6 (SP3,SP6)
; oligos_6nt_mkv4_m4 versus M02910_2.00 (SP3,SP6); m=118/180; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.479603; ------sCCACrCCCmc---- ; cor=; Ncor= a 0 0 0 0 0 0 22.3999 17.6351 8.55439 71.6826 2.25957 26.1176 2.06696 2.5942 0.957055 43.3481 12.7548 0 0 0 0 c 0 0 0 0 0 0 30.0549 70.9806 83.8812 23.8364 93.3343 3.89076 96.2009 95.7826 81.092 45.3752 55.8995 0 0 0 0 g 0 0 0 0 0 0 35.5782 4.23155 3.17299 2.67418 1.2004 55.5378 0.55313 0.768116 1.5092 2.34931 9.05016 0 0 0 0 t 0 0 0 0 0 0 11.9671 7.15283 4.39142 1.80688 3.20576 14.4538 1.17904 0.855072 16.4417 8.92737 22.2955 0 0 0 0

M08975_2.00_shift8 (M08975_2.00)
; oligos_6nt_mkv4_m4 versus M08975_2.00; m=119/180; ncol2=20; w=0; offset=0; strand=D; shift=8; score=0.478935; --------yyyggCyCCGCCy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 9.41884 8.61723 23.0461 21.2425 6.21242 2.80561 5.01002 6.61323 7.21443 9.61924 2.40481 1.80361 2.20441 c 0 0 0 0 0 0 0 0 43.0862 49.8998 36.4729 12.4248 14.2285 74.7495 56.7134 86.1723 85.5711 1.002 93.5872 90.1804 61.523 g 0 0 0 0 0 0 0 0 14.2285 11.2224 7.81563 41.483 59.7194 1.002 3.00601 1.80361 1.60321 76.9539 0.400802 1.2024 2.00401 t 0 0 0 0 0 0 0 0 33.2665 30.2605 32.6653 24.8497 19.8397 21.4429 35.2705 5.41082 5.61122 12.4248 3.60721 6.81363 34.2685

M08873_2.00_shift8 (SP4)
; oligos_6nt_mkv4_m4 versus M08873_2.00 (SP4); m=120/180; ncol2=20; w=0; offset=0; strand=D; shift=8; score=0.478935; --------yyyggCyCCGCCy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 9.41884 8.61723 23.0461 21.2425 6.21242 2.80561 5.01002 6.61323 7.21443 9.61924 2.40481 1.80361 2.20441 c 0 0 0 0 0 0 0 0 43.0862 49.8998 36.4729 12.4248 14.2285 74.7495 56.7134 86.1723 85.5711 1.002 93.5872 90.1804 61.523 g 0 0 0 0 0 0 0 0 14.2285 11.2224 7.81563 41.483 59.7194 1.002 3.00601 1.80361 1.60321 76.9539 0.400802 1.2024 2.00401 t 0 0 0 0 0 0 0 0 33.2665 30.2605 32.6653 24.8497 19.8397 21.4429 35.2705 5.41082 5.61122 12.4248 3.60721 6.81363 34.2685

M08864_2.00_shift0 (PATZ1)
; oligos_6nt_mkv4_m4 versus M08864_2.00 (PATZ1); m=121/180; ncol2=22; w=-8; offset=-8; strand=D; shift=0; score=0.478536; cyyCccyycCmkcCCCckCCc ; cor=; Ncor= a 16.9043 4.48065 5.49898 4.07332 18.9409 17.1079 2.24033 3.05499 7.12831 6.31365 33.8086 1.62933 5.49898 1.01833 2.64766 12.0163 7.12831 11.8126 3.25866 9.16497 19.7556 c 48.8798 62.3218 31.3646 77.3931 57.6375 34.8269 49.4908 57.8411 60.6925 76.5784 55.3971 0.814664 61.5071 84.7251 69.2464 70.6721 62.3218 13.6456 84.1141 68.2281 63.9511 g 20.3666 1.42566 21.7923 5.70265 7.53564 24.0326 19.1446 6.31365 16.0896 14.2566 2.85132 55.8045 11.8126 1.62933 6.51731 3.05499 6.10998 28.7169 8.55397 8.35031 2.64766 t 13.8493 31.7719 41.3442 12.831 15.8859 24.0326 29.1242 32.7902 16.0896 2.85132 7.94297 41.7515 21.1813 12.6273 21.5886 14.2566 24.4399 45.8248 4.07332 14.2566 13.6456

M04646_2.00_shift6 (SP6,SP9)
; oligos_6nt_mkv4_m4 versus M04646_2.00 (SP6,SP9); m=122/180; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.478097; ------rcCACGCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 0 33.7393 14.4853 8.6369 82.2039 0 9.06832 0 2.87278 0 47.0257 6.99482 17.1203 0 0 0 c 0 0 0 0 0 0 9.67049 64.9744 81.9624 15.4979 99.2883 0 98.5169 95.4172 84.1375 40.3882 67.8756 45.8453 0 0 0 g 0 0 0 0 0 0 50 5.49604 4.52409 0 0 86.646 0.353107 1.70999 1.62847 0.939261 2.65544 6.94842 0 0 0 t 0 0 0 0 0 0 6.59026 15.0442 4.87662 2.29817 0.711744 4.28571 1.12994 0 14.234 11.6468 22.4741 30.086 0 0 0

M04657_2.00_shift5 (KLF14)
; oligos_6nt_mkv4_m4 versus M04657_2.00 (KLF14); m=123/180; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.476291; -----srcCaCGCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 24.251 42.2284 16.4532 5.29267 65.2909 2.21104 18.4092 0.217797 0.265128 0.689655 35.1905 10.5908 19.8902 0 0 0 c 0 0 0 0 0 26.5725 11.9261 63.3006 87.1854 18.7423 97.2095 2.73727 99.1755 99.423 86.2069 52.5107 61.7582 39.8745 0 0 0 g 0 0 0 0 0 28.5961 38.409 8.59895 1.31291 11.4093 0.21348 71.5167 0.0777847 0.311915 0.351589 1.89847 6.2606 13.3804 0 0 0 t 0 0 0 0 0 20.5804 7.43645 11.6473 6.20897 4.55756 0.365965 7.33677 0.528936 0 12.7519 10.4003 21.3904 26.8549 0 0 0

M08361_2.00_shift9 (ZSCAN22)
; oligos_6nt_mkv4_m4 versus M08361_2.00 (ZSCAN22); m=124/180; ncol2=18; w=0; offset=1; strand=D; shift=9; score=0.47607; ---------cyGCCTCCkCCm ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 10.4947 19.5856 7.01872 2.20588 1.40374 2.20588 0.0668449 0.0668449 7.82086 0.0668449 0.601604 38.3021 c 0 0 0 0 0 0 0 0 0 47.1257 30.8155 6.21658 85.8957 93.6497 3.81016 99.2647 87.7674 13.4358 97.1257 90.1738 41.2433 g 0 0 0 0 0 0 0 0 0 24.3984 24.3984 76.5374 2.74064 0.601604 21.7246 0.601604 0.601604 40.9759 0.0668449 2.20588 16.1096 t 0 0 0 0 0 0 0 0 0 17.9813 25.2005 10.2273 9.15775 4.34492 72.2594 0.0668449 11.5642 37.7674 2.74064 7.01872 4.34492

M08086_2.00_shift12 (KLF5)
; oligos_6nt_mkv4_m4 versus M08086_2.00 (KLF5); m=125/180; ncol2=10; w=0; offset=4; strand=D; shift=12; score=0.474661; ------------gCCMCrCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 10.4989 0 0 25.5455 0 37.1097 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 14.863 87.4293 88.2228 70.3034 100 0 100 100 96.5028 g 0 0 0 0 0 0 0 0 0 0 0 0 55.6315 0 0 0 0 38.0721 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 19.0067 12.5707 11.7772 4.15105 0 24.8182 0 0 3.49717

M05859_2.00_shift5 (M05859_2.00)
; oligos_6nt_mkv4_m4 versus M05859_2.00; m=126/180; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.473622; -----rGccmCGCCCmyw--- ; cor=; Ncor= a 0 0 0 0 0 33 17.4 21.7 14.9 52.9 0.2 5.5 0.1 0.1 0.1 43.2 12.8 29.7 0 0 0 c 0 0 0 0 0 9.2 1.9 44.6 64.8 46.8 99.3 0.3 99.6 99.6 80.6 38.7 41.1 15.7 0 0 0 g 0 0 0 0 0 35.6 71.1 14.9 2.1 0.2 0.2 87.3 0.1 0.1 0.1 0.7 13.2 18.1 0 0 0 t 0 0 0 0 0 22.2 9.5 18.8 18.2 0.1 0.3 6.9 0.1 0.1 19.2 17.4 32.9 36.5 0 0 0

M09037_2.00_rc_shift4 (M09037_2.00_rc)
; oligos_6nt_mkv4_m4 versus M09037_2.00_rc; m=127/180; ncol2=14; w=-4; offset=-4; strand=R; shift=4; score=0.470354; ----wkkyCCCGCCcccy--- ; cor=; Ncor= a 0 0 0 0 32.8 24.2 10.4 4.8 1.8 4 3.2 7 1 0.2 15.6 17.6 6.2 15.4 0 0 0 c 0 0 0 0 19.6 17.6 10.6 32.6 90.4 91 95.8 0.6 97 90 53 55.2 60.4 27.4 0 0 0 g 0 0 0 0 19.6 28 39.4 4.8 1 4.8 0.2 89.8 0.8 7.4 6.6 6.8 10 19 0 0 0 t 0 0 0 0 28 30.2 39.6 57.8 6.8 0.2 0.8 2.6 1.2 2.4 24.8 20.4 23.4 38.2 0 0 0

M04537_2.00_shift5 (KLF13)
; oligos_6nt_mkv4_m4 versus M04537_2.00 (KLF13); m=128/180; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.467712; -----crCCACRCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 23.8837 39.5377 16.4845 4.1606 76.1744 0.202505 25.201 0.217115 0.321351 0.192691 39.3057 7.57222 19.0559 0 0 0 c 0 0 0 0 0 31.1724 11.4831 71.5224 92.0949 21.3192 99.61 0.889699 99.431 99.2527 91.3977 51.1096 70.0514 40.3629 0 0 0 g 0 0 0 0 0 24.2527 43.8909 6.20389 0.811317 1.99025 0 71.1813 0.164708 0.246618 0.144519 0.680735 3.81613 13.0402 0 0 0 t 0 0 0 0 0 20.6912 5.08826 5.78922 2.93322 0.516203 0.187505 2.72805 0.187168 0.179359 8.26509 8.90402 18.5603 27.541 0 0 0

M04658_2.00_shift5 (KLF14)
; oligos_6nt_mkv4_m4 versus M04658_2.00 (KLF14); m=129/180; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.465824; -----crcCaCrCCCmcc--- ; cor=; Ncor= a 0 0 0 0 0 18.6657 35.0563 17.8602 3.48319 54.8431 1.55897 35.8318 0 0.333264 0.287186 35.8439 11.1429 20.7362 0 0 0 c 0 0 0 0 0 38.9313 10.1459 62.6548 88.8259 20.6916 98.0821 0 99.6665 99.5938 80.7754 50.5193 62.5422 41.0331 0 0 0 g 0 0 0 0 0 19.7218 44.6686 8.18319 1.66264 16.1782 0 52.0917 0 0.0729015 0.0675733 2.51964 5.99601 13.7927 0 0 0 t 0 0 0 0 0 22.6812 10.1292 11.3018 6.02824 8.28698 0.358974 12.0765 0.333507 0 18.8698 11.1171 20.3189 24.4379 0 0 0

M01917_2.00_rc_shift9 (M01917_2.00_rc)
; oligos_6nt_mkv4_m4 versus M01917_2.00_rc; m=130/180; ncol2=8; w=0; offset=1; strand=R; shift=9; score=0.465592; ---------tCCCCCCc---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 10.8757 6.35513 3.18153 0.801333 3.97493 2.38813 7.38283 7.34593 0 0 0 0 c 0 0 0 0 0 0 0 0 0 23.9135 78.5544 81.728 97.596 93.629 87.2818 68.0187 62.3716 0 0 0 0 g 0 0 0 0 0 0 0 0 0 17.3946 7.94192 8.73532 1.59473 2.38813 8.73532 20.4933 17.434 0 0 0 0 t 0 0 0 0 0 0 0 0 0 47.8162 7.14852 6.35513 0.00793399 0.00793399 1.59473 4.10521 12.8485 0 0 0 0

M08321_2.00_shift5 (ZNF281)
; oligos_6nt_mkv4_m4 versus M08321_2.00 (ZNF281); m=131/180; ncol2=12; w=-3; offset=-3; strand=D; shift=5; score=0.465365; -----ybCCCCTCCCCC---- ; cor=; Ncor= a 0 0 0 0 0 9.89583 12.5744 0.967262 1.86012 0.0744048 10.4911 9.59821 0.0744048 0.0744048 0.0744048 0.0744048 0.0744048 0 0 0 0 c 0 0 0 0 0 39.3601 27.753 92.3363 96.2054 99.7768 77.1577 0.0744048 99.7768 99.7768 96.2054 99.7768 99.7768 0 0 0 0 g 0 0 0 0 0 24.4792 27.1577 2.75298 0.0744048 0.0744048 0.0744048 17.0387 0.0744048 0.0744048 0.0744048 0.0744048 0.0744048 0 0 0 0 t 0 0 0 0 0 26.2649 32.5149 3.94345 1.86012 0.0744048 12.2768 73.2887 0.0744048 0.0744048 3.64583 0.0744048 0.0744048 0 0 0 0

M04538_2.00_shift5 (KLF13)
; oligos_6nt_mkv4_m4 versus M04538_2.00 (KLF13); m=132/180; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.464267; -----crCCACRCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 19.2843 33.2076 18.5758 1.25656 80.2155 0 28.5787 0 0.126017 0.0174972 33.8885 5.28546 18.457 0 0 0 c 0 0 0 0 0 37.2752 4.84968 74.7925 96.574 13.6604 100 0 100 99.7862 91.4439 59.5032 76.796 44.2501 0 0 0 g 0 0 0 0 0 21.3509 58.8905 2.47009 1.45613 5.61149 0 69.5658 0 0.0305495 0.139978 0.45747 1.64547 9.06969 0 0 0 t 0 0 0 0 0 22.0896 3.0522 4.16166 0.713283 0.512647 0 1.85555 0 0.0572803 8.39866 6.15082 16.2731 28.2232 0 0 0

M04540_2.00_shift5 (KLF13)
; oligos_6nt_mkv4_m4 versus M04540_2.00 (KLF13); m=133/180; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.463766; -----crCCACrCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 20.513 34.9546 17.3045 1.51246 75.5084 0 30.9757 0.0176134 0.364275 0.154971 35.7388 6.61041 18.839 0 0 0 c 0 0 0 0 0 34.234 4.11928 76.293 95.8513 18.075 99.9119 0 99.9031 99.5743 90.1534 55.83 73.1145 43.0158 0 0 0 g 0 0 0 0 0 22.3246 57.854 2.4346 1.62653 5.56794 0 65.2592 0.00440335 0.0351108 0.107288 0.799128 2.66336 10.2878 0 0 0 t 0 0 0 0 0 22.9284 3.07208 3.96799 1.00972 0.84867 0.0880747 3.76517 0.0748569 0.0263331 9.58436 7.63208 17.6118 27.8574 0 0 0

M04539_2.00_shift5 (KLF13)
; oligos_6nt_mkv4_m4 versus M04539_2.00 (KLF13); m=134/180; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.461661; -----crCCACRCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 24.9894 44.4014 16.781 3.06778 77.518 0 26.2894 0 0.0653218 0.0643522 40.4336 10.1436 21.3777 0 0 0 c 0 0 0 0 0 30.6089 5.35247 71.8852 95.402 20.7138 99.8425 0.0713267 99.9423 99.8963 88.0542 48.9039 64.5221 37.6938 0 0 0 g 0 0 0 0 0 24.2355 46.3741 5.50241 0.245863 1.4163 0 71.3212 0 0.0384246 0.0779001 0.436396 4.42612 15.4967 0 0 0 t 0 0 0 0 0 20.1662 3.87207 5.83144 1.28436 0.35184 0.157456 2.31812 0.0576635 0 11.8036 10.2261 20.9082 25.4317 0 0 0

M04457_2.00_shift6 (KLF16)
; oligos_6nt_mkv4_m4 versus M04457_2.00 (KLF16); m=135/180; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.461563; ------rcCmCgCCCm----- ; cor=; Ncor= a 0 0 0 0 0 0 32.0237 21.6005 9.64297 56.0179 0 23.6651 2.08927 5.70598 7.5165 27.5834 0 0 0 0 0 c 0 0 0 0 0 0 22.5292 57.0911 77.8929 27.5676 97.7205 13.1345 92.8205 88.8061 78.6577 52.9773 0 0 0 0 0 g 0 0 0 0 0 0 35.8502 11.3551 4.04845 9.23888 0 56.8721 1.82336 3.18008 3.21906 3.76509 0 0 0 0 0 t 0 0 0 0 0 0 9.59689 9.95327 8.41568 7.17561 2.27954 6.32828 3.26686 2.30783 10.6068 15.6742 0 0 0 0 0

M04559_2.00_shift5 (SP3,SP6)
; oligos_6nt_mkv4_m4 versus M04559_2.00 (SP3,SP6); m=136/180; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.459197; -----sgCCMCGCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 18.12 23.453 11.418 5.5243 73.9408 0 14.5351 0 0 0.185874 48.8032 4.24892 21.0642 0 0 0 c 0 0 0 0 0 30.96 6.35643 77.1332 85.2344 25.9592 100 0 99.4628 100 84.4711 42.5361 75.2961 41.0082 0 0 0 g 0 0 0 0 0 26.08 60.8498 3.00879 1.15942 0.019984 0 70.9581 0.0198965 0 0 0.511602 1.74845 7.9816 0 0 0 t 0 0 0 0 0 24.84 9.34075 8.44006 8.08184 0.0799361 0 14.5067 0.51731 0 15.343 8.1491 18.7065 29.946 0 0 0

M01966_2.00_rc_shift12 (M01966_2.00_rc)
; oligos_6nt_mkv4_m4 versus M01966_2.00_rc; m=137/180; ncol2=10; w=0; offset=4; strand=R; shift=12; score=0.458273; ------------wrcsCGCsm ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 30.5947 30.9841 14.5285 0 0 0.015839 0 21.7297 35.8729 c 0 0 0 0 0 0 0 0 0 0 0 0 21.5597 19.1724 56.0426 38.6778 99.9818 0.00256633 86.003 42.0424 29.6654 g 0 0 0 0 0 0 0 0 0 0 0 0 18.7431 35.6402 20.6169 61.2684 0.00013302 99.9552 11.7562 25.7563 11.5881 t 0 0 0 0 0 0 0 0 0 0 0 0 29.1025 14.2033 8.81198 0.0448364 0.015222 0.0263766 2.23532 10.4717 22.8736

M10294_2.00_shift6 (SP1)
; oligos_6nt_mkv4_m4 versus M10294_2.00 (SP1); m=138/180; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score= 0.4572; ------wcCmyGCCyc----- ; cor=; Ncor= a 0 0 0 0 0 0 54.5455 9.09091 18.1818 27.2727 18.1818 9.09091 0 0 9.09091 18.1818 0 0 0 0 0 c 0 0 0 0 0 0 0 63.6364 72.7273 63.6364 54.5455 18.1818 100 100 54.5455 54.5455 0 0 0 0 0 g 0 0 0 0 0 0 18.1818 18.1818 0 9.09091 0 72.7273 0 0 9.09091 9.09091 0 0 0 0 0 t 0 0 0 0 0 0 27.2727 9.09091 9.09091 0 27.2727 0 0 0 27.2727 18.1818 0 0 0 0 0

M04558_2.00_shift5 (SP3,SP6)
; oligos_6nt_mkv4_m4 versus M04558_2.00 (SP3,SP6); m=139/180; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.45666; -----srCCACGCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 19.2232 28.4502 8.48454 2.28343 79.5427 0.0907853 6.15079 0 0 0.0273486 47.7649 7.4691 23.0011 0 0 0 c 0 0 0 0 0 28.5844 7.03964 84.2193 94.0631 20.2604 99.7276 0 100 99.8636 90.1272 44.005 68.7265 39.5691 0 0 0 g 0 0 0 0 0 28.7513 58.9288 2.88781 0.770658 0.0302847 0 87.1825 0 0 0.0273486 0.5431 3.98979 7.95024 0 0 0 t 0 0 0 0 0 23.4411 5.58133 4.40838 2.88283 0.166566 0.181571 6.66667 0 0.136364 9.81813 7.68695 19.8146 29.4796 0 0 0

M07614_2.00_shift6 (ZNF180)
; oligos_6nt_mkv4_m4 versus M07614_2.00 (ZNF180); m=140/180; ncol2=21; w=-2; offset=-2; strand=D; shift=6; score=0.455641; ------CCsCasbCcCCdCCc ; cor=; Ncor= a 0 0 0 0 0 0 0.182482 0.182482 10.4015 2.37226 49.0876 8.21168 7.48175 0.182482 3.10219 3.10219 0.182482 27.1898 0.912409 2.37226 14.781 c 0 0 0 0 0 0 92.8832 85.5839 57.1168 76.8248 19.8905 45.438 27.9197 99.4526 66.6058 73.9051 91.4234 11.1314 92.1533 70.9854 57.1168 g 0 0 0 0 0 0 6.75182 5.29197 28.6496 9.67153 21.3504 46.1679 25.7299 0.182482 16.9708 16.2409 0.182482 36.6788 5.29197 9.67153 11.1314 t 0 0 0 0 0 0 0.182482 8.94161 3.83212 11.1314 9.67153 0.182482 38.8686 0.182482 13.3212 6.75182 8.21168 25 1.64234 16.9708 16.9708

M08938_2.00_shift2 (SP1)
; oligos_6nt_mkv4_m4 versus M08938_2.00 (SP1); m=141/180; ncol2=22; w=-6; offset=-6; strand=D; shift=2; score=0.453904; --cCccscCCmgGCCCCGCCC ; cor=; Ncor= a 0 0 3.60721 5.41082 10.8216 6.61323 5.81162 6.81363 3.80762 3.60721 28.0561 15.6313 5.81162 4.00802 1.60321 6.41283 0.200401 1.002 0 0 0 c 0 0 60.9218 70.5411 62.9259 58.1162 58.7174 57.515 68.1363 70.5411 46.2926 19.0381 1.40281 91.1824 91.5832 92.5852 98.7976 0.400802 99.5992 99.1984 93.3868 g 0 0 18.6373 12.024 14.4289 23.2465 26.6533 19.6393 16.6333 17.6353 11.2224 59.519 86.7735 3.00601 0.200401 0.801603 0 95.3908 0 0.801603 0.801603 t 0 0 16.8337 12.024 11.8236 12.024 8.81764 16.0321 11.4228 8.21643 14.4289 5.81162 6.01202 1.80361 6.61323 0.200401 1.002 3.20641 0.400802 0 5.81162

M00784_2.00_shift12 (M00784_2.00)
; oligos_6nt_mkv4_m4 versus M00784_2.00; m=142/180; ncol2=10; w=0; offset=4; strand=D; shift=12; score=0.452094; ------------cCCCCCCay ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 17.3335 21.1796 0.0178463 0.803491 0.0177459 2.56885 12.8322 46.6398 19.5656 c 0 0 0 0 0 0 0 0 0 0 0 0 64.2411 73.1883 99.8869 96.661 98.3368 95.9145 75.336 24.84 35.2961 g 0 0 0 0 0 0 0 0 0 0 0 0 11.1634 0.0305936 0.0610562 0.072891 0.110626 0.0783521 1.32572 14.3314 12.2285 t 0 0 0 0 0 0 0 0 0 0 0 0 7.26191 5.60151 0.0341852 2.46258 1.5348 1.43829 10.5061 14.1888 32.9098

M00775_2.00_shift12 (ZBTB1)
; oligos_6nt_mkv4_m4 versus M00775_2.00 (ZBTB1); m=143/180; ncol2=10; w=0; offset=4; strand=D; shift=12; score=0.450097; ------------rymmCGCAh ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 27.9683 22.3901 26.5567 34.5729 6.36277 2.02283 2.52323 71.5054 30.7829 c 0 0 0 0 0 0 0 0 0 0 0 0 22.0006 30.5273 56.7855 55.8724 89.1628 0.0111591 90.5174 4.13618 30.4766 g 0 0 0 0 0 0 0 0 0 0 0 0 28.2494 10.8985 8.07911 6.19084 1.18585 97.954 0.0316044 21.9721 9.45893 t 0 0 0 0 0 0 0 0 0 0 0 0 21.7817 36.1841 8.57869 3.3638 3.28861 0.0119682 6.9278 2.38637 29.2816

M07717_2.00_shift5 (ZNF441)
; oligos_6nt_mkv4_m4 versus M07717_2.00 (ZNF441); m=144/180; ncol2=12; w=-3; offset=-3; strand=D; shift=5; score=0.449829; -----rrCTCCGcCyCc---- ; cor=; Ncor= a 0 0 0 0 0 26.6892 47.4099 0.112613 0.112613 0.112613 0.112613 0.112613 0.563063 0.112613 0.563063 0.112613 15.8784 0 0 0 0 c 0 0 0 0 0 18.5811 1.46396 99.6622 21.2838 99.6622 99.6622 0.112613 65.4279 80.7432 56.4189 69.9324 47.8604 0 0 0 0 g 0 0 0 0 0 48.3108 51.0135 0.112613 0.112613 0.112613 0.112613 99.6622 10.9234 7.77027 6.41892 20.3829 22.1847 0 0 0 0 t 0 0 0 0 0 6.41892 0.112613 0.112613 78.491 0.112613 0.112613 0.112613 23.0856 11.3739 36.5991 9.57207 14.0766 0 0 0 0

M00134_2.00_shift6 (M00134_2.00)
; oligos_6nt_mkv4_m4 versus M00134_2.00; m=145/180; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.44818; ------gccmCgCCCh----- ; cor=; Ncor= a 0 0 0 0 0 0 23.4441 21.9242 17.7318 51.5538 0.989471 22.8736 0.00886864 0.0191497 0.112067 34.2124 0 0 0 0 0 c 0 0 0 0 0 0 18.0766 49.7789 53.8047 35.2557 97.4574 1.03044 99.9596 99.9363 82.3801 25.8571 0 0 0 0 0 g 0 0 0 0 0 0 41.4554 11.5605 7.65501 8.95871 0.0320459 66.0217 0.0241075 0.0173274 0.0228534 7.71053 0 0 0 0 0 t 0 0 0 0 0 0 17.0239 16.7365 20.8085 4.2318 1.52107 10.0743 0 0.0271748 17.485 32.22 0 0 0 0 0

M08387_2.00_shift7 (ZBTB14)
; oligos_6nt_mkv4_m4 versus M08387_2.00 (ZBTB14); m=146/180; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.447543; -------sCGCGCsCc----- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 12.6972 0.0788644 12.3817 0 0 0 0 0 c 0 0 0 0 0 0 0 36.6719 99.7634 0.0788644 99.7634 0.0788644 99.7634 37.6183 99.7634 57.1767 0 0 0 0 0 g 0 0 0 0 0 0 0 57.4921 0.0788644 99.7634 0.0788644 99.7634 0.0788644 49.6057 0.0788644 20.2681 0 0 0 0 0 t 0 0 0 0 0 0 0 5.7571 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 10.1735 0 0 0 0 0

M08963_2.00_shift2 (M08963_2.00)
; oligos_6nt_mkv4_m4 versus M08963_2.00; m=147/180; ncol2=24; w=-6; offset=-6; strand=D; shift=2; score=0.446299; --CCCsgCYCCkCCCCCtcCc ; cor=; Ncor= a 0 0 2.45399 3.68098 12.0654 8.79346 5.31697 1.63599 1.84049 0.817996 0.817996 6.33947 0.817996 3.68098 3.47648 4.29448 2.24949 13.7014 2.86299 5.52147 8.99796 c 0 0 69.9387 71.5746 68.5072 34.7648 11.6564 93.047 69.5297 92.8425 91.411 1.43149 92.638 79.9591 73.6196 77.0961 71.7791 22.4949 57.0552 73.8241 55.2147 g 0 0 11.8609 12.8834 7.77096 38.4458 58.0777 1.84049 2.86299 2.24949 1.22699 61.1452 1.63599 4.90798 5.31697 5.52147 8.79346 23.9264 24.3354 4.90798 11.8609 t 0 0 15.7464 11.8609 11.6564 17.9959 24.9489 3.47648 25.7669 4.08998 6.54397 31.0838 4.90798 11.4519 17.5869 13.0879 17.1779 39.8773 15.7464 15.7464 23.9264

M03705_2.00_shift6 (M03705_2.00)
; oligos_6nt_mkv4_m4 versus M03705_2.00; m=148/180; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.444498; ------rmCACrCCCmc---- ; cor=; Ncor= a 0 0 0 0 0 0 30.7967 30.3548 0 88.1119 3.4188 40.0564 6.49926 6.6482 0 40.2102 9.44386 0 0 0 0 c 0 0 0 0 0 0 10.9394 52.2996 90.7781 5.17483 89.7436 1.97461 93.0576 87.2576 80.3571 42.5756 66.107 0 0 0 0 g 0 0 0 0 0 0 44.1141 1.97109 4.89914 6.71329 0 48.6601 0 1.52355 3.06122 1.44547 0.629591 0 0 0 0 t 0 0 0 0 0 0 14.1498 15.3745 4.32277 0 6.83761 9.30889 0.443131 4.57064 16.5816 15.7687 23.8195 0 0 0 0

M09036_2.00_rc_shift4 (E2F4_rc)
; oligos_6nt_mkv4_m4 versus M09036_2.00_rc (E2F4_rc); m=149/180; ncol2=13; w=-4; offset=-4; strand=R; shift=4; score=0.442785; ----hytYCCCGCCcys---- ; cor=; Ncor= a 0 0 0 0 32.6 14.8 4.2 1.2 0.2 0.8 1.6 1.4 0.2 1.6 13 16.4 9 0 0 0 0 c 0 0 0 0 30.6 28.2 22.2 25 89.4 95 94.6 0 95.8 69.6 52.6 46.2 50.6 0 0 0 0 g 0 0 0 0 11.4 18.8 20 2.2 1.4 3.8 0.2 97.4 3.6 18.8 10 9.6 25.8 0 0 0 0 t 0 0 0 0 25.4 38.2 53.6 71.6 9 0.4 3.6 1.2 0.4 10 24.4 27.8 14.6 0 0 0 0

M04458_2.00_shift6 (KLF16)
; oligos_6nt_mkv4_m4 versus M04458_2.00 (KLF16); m=150/180; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.442296; ------rcCACGCCCc----- ; cor=; Ncor= a 0 0 0 0 0 0 26.7813 23.9973 3.34076 78.7996 0 21.2741 0 1.33281 2.78963 22.6454 0 0 0 0 0 c 0 0 0 0 0 0 10.8518 54.7166 90.6459 10.2614 100 2.62548 100 95.7272 80.1444 57.5348 0 0 0 0 0 g 0 0 0 0 0 0 52.9075 8.29039 2.37565 2.19426 0 73.0116 0 1.17601 0.0656383 3.1941 0 0 0 0 0 t 0 0 0 0 0 0 9.45946 12.9957 3.63771 8.74476 0 3.0888 0 1.76401 17.0003 16.6257 0 0 0 0 0

M06160_2.00_shift3 (M06160_2.00)
; oligos_6nt_mkv4_m4 versus M06160_2.00; m=151/180; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.441338; ---kwrGCCmCGCCCmcy--- ; cor=; Ncor= a 0 0 0 11.04 33.6 27.8219 17.3291 6.51828 4.45151 39.4277 0.63593 3.6566 0.794913 0.63593 1.27186 43.0843 7.3955 22.8525 0 0 0 c 0 0 0 19.04 8.96 11.2878 0.953895 81.2401 72.496 60.5723 99.2051 0 99.2051 99.3641 81.876 42.1304 62.701 27.2285 0 0 0 g 0 0 0 25.12 14.4 42.4483 74.2448 5.40541 1.27186 0 0 90.461 0 0 0 1.43084 7.55627 13.128 0 0 0 t 0 0 0 44.8 43.04 18.442 7.47218 6.83625 21.7806 0 0.158983 5.88235 0 0 16.8521 13.3545 22.3473 36.7909 0 0 0

M00787_2.00_shift6 (M00787_2.00)
; oligos_6nt_mkv4_m4 versus M00787_2.00; m=152/180; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.440752; ------rccmCrCCCw----- ; cor=; Ncor= a 0 0 0 0 0 0 25.986 23.1178 19.3153 50.6834 0.194537 30.2468 0.00336185 0.00625172 2.24714 39.1927 0 0 0 0 0 c 0 0 0 0 0 0 15.6045 47.0215 51.4647 34.6604 99.7699 0.00388508 99.9566 99.9931 79.0168 22.3872 0 0 0 0 0 g 0 0 0 0 0 0 41.1638 13.0737 10.2872 8.63306 0.00306676 62.1399 0.00261821 0.000459717 0.0148413 12.4098 0 0 0 0 0 t 0 0 0 0 0 0 17.2456 16.787 18.9328 6.02308 0.0324799 7.60943 0.0374307 0 18.7213 26.0102 0 0 0 0 0

M01965_2.00_rc_shift13 (M01965_2.00_rc)
; oligos_6nt_mkv4_m4 versus M01965_2.00_rc; m=153/180; ncol2=9; w=0; offset=5; strand=R; shift=13; score=0.440218; -------------rssCGCcm ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 26.6951 17.0249 0.941705 0 1.40615 0 8.43249 41.9828 c 0 0 0 0 0 0 0 0 0 0 0 0 0 23.9143 53.2328 33.1134 99.9041 0.00148976 86.4773 55.2624 27.3102 g 0 0 0 0 0 0 0 0 0 0 0 0 0 36.3967 28.0692 64.7113 0.00126108 98.579 11.587 24.0971 13.2933 t 0 0 0 0 0 0 0 0 0 0 0 0 0 12.9939 1.67309 1.2336 0.0866577 0.0133113 1.93456 12.208 17.4137

M07612_2.00_shift9 (ZNF202)
; oligos_6nt_mkv4_m4 versus M07612_2.00 (ZNF202); m=154/180; ncol2=8; w=0; offset=1; strand=D; shift=9; score=0.436197; ---------CCkCsTCC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 100 100 0 100 50 0 100 100 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 50 0 50 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 50 0 0 100 0 0 0 0 0 0

M06159_2.00_shift3 (M06159_2.00)
; oligos_6nt_mkv4_m4 versus M06159_2.00; m=155/180; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.435604; ---ktgRCCmCGCCCmyh--- ; cor=; Ncor= a 0 0 0 4.16667 25 20.8333 25 0 0 41.6667 0 4.16667 0 0 0 33.3333 4.34783 26.087 0 0 0 c 0 0 0 4.16667 12.5 8.33333 0 87.5 83.3333 58.3333 100 4.16667 100 100 95.8333 58.3333 47.8261 26.087 0 0 0 g 0 0 0 29.1667 8.33333 54.1667 75 0 4.16667 0 0 83.3333 0 0 0 4.16667 17.3913 8.69565 0 0 0 t 0 0 0 62.5 54.1667 16.6667 0 12.5 12.5 0 0 8.33333 0 0 4.16667 4.16667 30.4348 39.1304 0 0 0

M00779_2.00_shift6 (M00779_2.00)
; oligos_6nt_mkv4_m4 versus M00779_2.00; m=156/180; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.433301; ------rccmCrCCYh----- ; cor=; Ncor= a 0 0 0 0 0 0 27.1429 23.9158 19.9845 44.052 6.52389 36.7441 3.85933 3.10594 4.58462 32.2624 0 0 0 0 0 c 0 0 0 0 0 0 17.8341 41.8687 46.7566 34.3077 84.3918 0.00329278 94.6792 96.8649 70.2954 25.126 0 0 0 0 0 g 0 0 0 0 0 0 36.2745 15.4026 12.8707 12.0056 0.00980827 49.5994 0.013043 0.0134782 0.0240579 15.3929 0 0 0 0 0 t 0 0 0 0 0 0 18.7485 18.8128 20.3882 9.6347 9.07452 13.6533 1.44845 0.0156594 25.0959 27.2187 0 0 0 0 0

M09035_2.00_rc_shift4 (TFDP1,TFDP2,TFDP3_rc)
; oligos_6nt_mkv4_m4 versus M09035_2.00_rc (TFDP1,TFDP2,TFDP3_rc); m=157/180; ncol2=14; w=-4; offset=-4; strand=R; shift=4; score=0.430838; ----yytTCCCGCCyyyy--- ; cor=; Ncor= a 0 0 0 0 22.8 14.8 2.2 1.8 1.2 0.8 3.4 3.8 1.4 0.8 17.2 14.4 8.6 11 0 0 0 c 0 0 0 0 28.2 25.4 15.8 13 87.8 93.8 90.4 1.4 94.4 78.2 42.8 41.6 51.8 39.8 0 0 0 g 0 0 0 0 18 11.8 18.8 2 3.2 4.6 1.6 87.4 1 11.4 7.8 11 12.8 14 0 0 0 t 0 0 0 0 31 48 63.2 83.2 7.8 0.8 4.6 7.4 3.2 9.6 32.2 33 26.8 35.2 0 0 0

M04554_2.00_shift6 (KLF11)
; oligos_6nt_mkv4_m4 versus M04554_2.00 (KLF11); m=158/180; ncol2=22; w=-2; offset=-2; strand=D; shift=6; score= 0.4301; ------rcCACrCCCmcgcCA ; cor=; Ncor= a 0 0 0 0 0 0 28.8489 19.7979 10.425 69.4809 0.760334 31.7458 0 0.531684 0.118977 43.5945 7.26678 20.5346 22.0646 6.51694 85.812 c 0 0 0 0 0 0 19.4326 61.5644 79.0845 22.8657 97.6012 0.514664 99.9237 99.4358 88.0329 43.2999 67.6378 22.4113 60.5522 86.8458 12.7801 g 0 0 0 0 0 0 43.066 9.90831 3.8113 6.64951 0.0428357 63.7693 0 0.0108507 0.198295 1.866 6.37207 42.8805 4.37582 1.56407 1.14019 t 0 0 0 0 0 0 8.65248 8.72942 6.67912 1.00386 1.59563 3.97026 0.0763359 0.0217014 11.6498 11.2396 18.7234 14.1735 13.0074 5.07319 0.267698

M09030_2.00_rc_shift4 (E2F1_rc)
; oligos_6nt_mkv4_m4 versus M09030_2.00_rc (E2F1_rc); m=159/180; ncol2=14; w=-4; offset=-4; strand=R; shift=4; score=0.424672; ----yyyTCCCGCCcycy--- ; cor=; Ncor= a 0 0 0 0 16.8 9.4 1 3.4 0.8 0.6 1.8 1.8 1 1.4 24.2 22.8 11.2 13.4 0 0 0 c 0 0 0 0 39.6 36.6 27.2 9 89 89 95.8 0.4 96.6 70.4 46.6 29 45.2 37.8 0 0 0 g 0 0 0 0 16.4 14 6.4 2 3.4 8.2 0.8 92.2 0.6 20 10.2 21 20 16 0 0 0 t 0 0 0 0 27.2 40 65.4 85.6 6.8 2.2 1.6 5.6 1.8 8.2 19 27.2 23.6 32.8 0 0 0

M02541_2.00_shift14 (M02541_2.00)
; oligos_6nt_mkv4_m4 versus M02541_2.00; m=160/180; ncol2=8; w=0; offset=6; strand=D; shift=14; score=0.421636; --------------CCCGCGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 97.1154 97.1154 97.1154 0.961538 97.1154 0.961538 0.961538 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.961538 0.961538 0.961538 97.1154 0.961538 97.1154 97.1154 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538

M03704_2.00_shift6 (M03704_2.00)
; oligos_6nt_mkv4_m4 versus M03704_2.00; m=161/180; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.421308; ------rCCACrCCCh----- ; cor=; Ncor= a 0 0 0 0 0 0 37.9958 13.3205 9.30476 70.6121 0 35.0795 0 3.46062 0.998238 39.3436 0 0 0 0 0 c 0 0 0 0 0 0 15.2401 75.7239 82.0178 19.982 99.8727 1.39697 99.241 93.6158 92.1315 29.4558 0 0 0 0 0 g 0 0 0 0 0 0 43.8935 4.92278 3.816 5.49055 0 60.8847 0 1.43198 0.0587199 5.35937 0 0 0 0 0 t 0 0 0 0 0 0 2.87056 6.03282 4.86147 3.91539 0.127307 2.63873 0.759013 1.49165 6.81151 25.8413 0 0 0 0 0

M07616_2.00_shift7 (ZNF610)
; oligos_6nt_mkv4_m4 versus M07616_2.00 (ZNF610); m=162/180; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.420748; -------cGCCGCTCC----- ; cor=; Ncor= a 0 0 0 0 0 0 0 22.557 6.59609 5.61889 0.0814332 0.0814332 0.0814332 0.0814332 0.0814332 0.0814332 0 0 0 0 0 c 0 0 0 0 0 0 0 41.7752 0.0814332 79.886 99.7557 0.0814332 99.7557 0.0814332 99.7557 99.7557 0 0 0 0 0 g 0 0 0 0 0 0 0 20.9283 84.772 14.4137 0.0814332 99.7557 0.0814332 0.0814332 0.0814332 0.0814332 0 0 0 0 0 t 0 0 0 0 0 0 0 14.7394 8.55049 0.0814332 0.0814332 0.0814332 0.0814332 99.7557 0.0814332 0.0814332 0 0 0 0 0

M01913_2.00_rc_shift13 (DNMT1_rc)
; oligos_6nt_mkv4_m4 versus M01913_2.00_rc (DNMT1_rc); m=163/180; ncol2=10; w=0; offset=5; strand=R; shift=13; score=0.417959; -------------ysCCGckr ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 18.2278 23.8026 4.70122 0.0165734 0 20.9396 20.1591 25.2448 c 0 0 0 0 0 0 0 0 0 0 0 0 0 30.9678 27.6546 77.3099 79.0471 0.0197398 43.4514 24.8699 23.072 g 0 0 0 0 0 0 0 0 0 0 0 0 0 20.1448 26.5703 13.9827 20.9062 99.971 16.4717 27.4855 34.4193 t 0 0 0 0 0 0 0 0 0 0 0 0 0 30.6596 21.9725 4.00612 0.0301987 0.00313502 19.1374 27.4855 17.2639

M04606_2.00_shift3 (SP1)
; oligos_6nt_mkv4_m4 versus M04606_2.00 (SP1); m=164/180; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score= 0.4172; ---twrGCCmCGCCCmCw--- ; cor=; Ncor= a 0 0 0 16.9909 56.8037 51.2491 18.8739 5.40541 0.947551 64.5165 0.218648 12.3046 0 0 0 52.4992 4.05832 28.9973 0 0 0 c 0 0 0 22.2937 5.17881 2.43829 1.62252 91.9364 84.7191 33.994 99.4534 1.27804 100 100 93.8199 43.1881 71.4114 22.203 0 0 0 g 0 0 0 16.7869 2.76005 42.8571 77.9504 1.0395 0.987588 1.06907 0 80.2991 0 0 0.120882 0.563852 2.16444 6.4177 0 0 0 t 0 0 0 43.9285 35.2575 3.4555 1.55318 1.61865 13.3458 0.42042 0.327971 6.11829 0 0 6.05923 3.74886 22.3658 42.3819 0 0 0

M08900_2.00_shift7 (ZIC1)
; oligos_6nt_mkv4_m4 versus M08900_2.00 (ZIC1); m=165/180; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.415871; -------smCCwCCCm----- ; cor=; Ncor= a 0 0 0 0 0 0 0 6.59609 61.2378 0 11.7264 49.5114 0 2.9316 0 30.1303 0 0 0 0 0 c 0 0 0 0 0 0 0 27.443 26.7101 70.684 76.5472 17.5896 94.1368 94.1368 85.342 51.9544 0 0 0 0 0 g 0 0 0 0 0 0 0 44.3811 8.79479 23.4528 0 2.9316 5.86319 2.9316 5.86319 13.1922 0 0 0 0 0 t 0 0 0 0 0 0 0 21.5798 3.25733 5.86319 11.7264 29.9674 0 0 8.79479 4.72313 0 0 0 0 0

M08990_2.00_shift7 (M08990_2.00)
; oligos_6nt_mkv4_m4 versus M08990_2.00; m=166/180; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.415871; -------smCCwCCCm----- ; cor=; Ncor= a 0 0 0 0 0 0 0 6.59609 61.2378 0 11.7264 49.5114 0 2.9316 0 30.1303 0 0 0 0 0 c 0 0 0 0 0 0 0 27.443 26.7101 70.684 76.5472 17.5896 94.1368 94.1368 85.342 51.9544 0 0 0 0 0 g 0 0 0 0 0 0 0 44.3811 8.79479 23.4528 0 2.9316 5.86319 2.9316 5.86319 13.1922 0 0 0 0 0 t 0 0 0 0 0 0 0 21.5798 3.25733 5.86319 11.7264 29.9674 0 0 8.79479 4.72313 0 0 0 0 0

M04605_2.00_shift3 (SP1)
; oligos_6nt_mkv4_m4 versus M04605_2.00 (SP1); m=167/180; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.414405; ---ywrRCCACGCCCmCh--- ; cor=; Ncor= a 0 0 0 15.8388 55.3795 56.5615 27.8959 1.92315 0.107058 76.8869 0 1.88843 0 0.0161063 0 49.0866 2.36901 25.367 0 0 0 c 0 0 0 26.7261 3.67196 2.99495 0 97.665 96.6423 23.1131 99.9376 0 99.9658 99.9839 97.1322 48.1512 74.5634 31.4238 0 0 0 g 0 0 0 19.5135 1.95955 38.1259 71.8114 0.163928 0 0 0 96.4043 0 0 0 0.0298507 1.82186 6.12931 0 0 0 t 0 0 0 37.9216 38.989 2.31766 0.292655 0.247891 3.25067 0 0.0623855 1.70726 0.0342169 0 2.86784 2.73234 21.2458 37.0799 0 0 0

M08870_2.00_shift1 (MAZ)
; oligos_6nt_mkv4_m4 versus M08870_2.00 (MAZ); m=168/180; ncol2=22; w=-7; offset=-7; strand=D; shift=1; score=0.414378; -yyyyyyycyCycYyCCtCCy ; cor=; Ncor= a 0 6.6 10.8 7.6 12.2 8 5.8 4.4 4.2 5.8 8.8 21.6 2.8 4 3.4 1.4 3 23.8 1 3.4 1.2 c 0 56.2 43 44.6 55.6 45.6 57 51.2 64.8 55.4 69.8 33.2 65.6 68 66.6 85.2 90.6 2.6 82.6 86.6 67.4 g 0 9.8 10.6 20.4 6.2 13.4 7.2 7.8 12 5.4 4 13.4 20.2 0.8 3.4 2 1 8.8 11.2 1.8 1.2 t 0 27.4 35.6 27.4 26 33 30 36.6 19 33.4 17.4 31.8 11.4 27.2 26.6 11.4 5.4 64.8 5.2 8.2 30.2

M08988_2.00_shift1 (M08988_2.00)
; oligos_6nt_mkv4_m4 versus M08988_2.00; m=169/180; ncol2=22; w=-7; offset=-7; strand=D; shift=1; score=0.414378; -yyyyyyycyCycYyCCtCCy ; cor=; Ncor= a 0 6.6 10.8 7.6 12.2 8 5.8 4.4 4.2 5.8 8.8 21.6 2.8 4 3.4 1.4 3 23.8 1 3.4 1.2 c 0 56.2 43 44.6 55.6 45.6 57 51.2 64.8 55.4 69.8 33.2 65.6 68 66.6 85.2 90.6 2.6 82.6 86.6 67.4 g 0 9.8 10.6 20.4 6.2 13.4 7.2 7.8 12 5.4 4 13.4 20.2 0.8 3.4 2 1 8.8 11.2 1.8 1.2 t 0 27.4 35.6 27.4 26 33 30 36.6 19 33.4 17.4 31.8 11.4 27.2 26.6 11.4 5.4 64.8 5.2 8.2 30.2

M08246_2.00_shift6 (KLF10)
; oligos_6nt_mkv4_m4 versus M08246_2.00 (KLF10); m=170/180; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.413241; ------gCCmCrCCCw----- ; cor=; Ncor= a 0 0 0 0 0 0 21.554 6.673 2.8825 47.0175 0.7831 49.183 0.3685 0.2997 0.1386 40.7052 0 0 0 0 0 c 0 0 0 0 0 0 6.4761 87.4843 89.9687 50.1723 98.3641 0.2537 98.4802 99.0777 97.6252 23.5703 0 0 0 0 0 g 0 0 0 0 0 0 66.0954 3.0023 1.0613 1.8427 0.3461 44.1938 0.8289 0.3001 0.2082 1.8688 0 0 0 0 0 t 0 0 0 0 0 0 5.8745 2.8403 6.0874 0.9675 0.5068 6.3696 0.3225 0.3227 2.0279 33.8557 0 0 0 0 0

M08243_2.00_shift6 (KLF4)
; oligos_6nt_mkv4_m4 versus M08243_2.00 (KLF4); m=171/180; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.413241; ------gCCmCrCCCw----- ; cor=; Ncor= a 0 0 0 0 0 0 21.5541 6.6731 2.8826 47.0176 0.7831 49.183 0.3685 0.2997 0.1386 40.7052 0 0 0 0 0 c 0 0 0 0 0 0 6.4761 87.4843 89.9686 50.1722 98.364 0.2536 98.4801 99.0776 97.6252 23.5703 0 0 0 0 0 g 0 0 0 0 0 0 66.0954 3.0022 1.0613 1.8427 0.346 44.1938 0.8289 0.3 0.2081 1.8688 0 0 0 0 0 t 0 0 0 0 0 0 5.8745 2.8404 6.0875 0.9675 0.5068 6.3696 0.3225 0.3227 2.028 33.8558 0 0 0 0 0

M04525_2.00_shift2 (SP2)
; oligos_6nt_mkv4_m4 versus M04525_2.00 (SP2); m=172/180; ncol2=17; w=-6; offset=-6; strand=D; shift=2; score=0.410775; --mTAAGyCCCGCCCmCyy-- ; cor=; Ncor= a 0 0 32.2825 5.96175 70.5409 80.3629 5.3202 4.12121 1.7744 1.94411 0.484262 8.55057 0 0.601685 2.79126 48.3755 2.73973 13.0852 18.9155 0 0 c 0 0 38.8398 19.2351 8.74568 8.96478 12.5123 55.2727 98.0989 95.5043 95.3995 5.42231 97.786 95.4272 93.932 46.9314 84.5579 26.5306 25.599 0 0 g 0 0 15.5107 6.4117 0 3.52188 77.931 0.969697 0.126743 1.57959 2.66344 81.3347 0 3.12876 0 2.64741 0.124533 0 11.0971 0 0 t 0 0 13.367 68.3915 20.7135 7.15048 4.23645 39.6364 0 0.972053 1.45278 4.69239 2.21402 0.842359 3.2767 2.04573 12.5778 60.3842 44.3884 0 0

M09521_2.00_rc_shift6 (E2F1_rc)
; oligos_6nt_mkv4_m4 versus M09521_2.00_rc (E2F1_rc); m=173/180; ncol2=10; w=-2; offset=-2; strand=R; shift=6; score=0.407337; ------TTCCCGCCwg----- ; cor=; Ncor= a 0 0 0 0 0 0 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 37.7 14.1 0 0 0 0 0 c 0 0 0 0 0 0 4.8 0.2 98.2 91.7 99.5 0.2 99.5 79 21 22.4 0 0 0 0 0 g 0 0 0 0 0 0 0.2 0.2 1.5 8 0.2 99.5 0.2 14.7 15.8 42.4 0 0 0 0 0 t 0 0 0 0 0 0 94.9 99.5 0.2 0.2 0.2 0.2 0.2 6.2 25.7 21.3 0 0 0 0 0

M04464_2.00_shift5 (KLF4)
; oligos_6nt_mkv4_m4 versus M04464_2.00 (KLF4); m=174/180; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.407057; -----crCCmCrCCCa----- ; cor=; Ncor= a 0 0 0 0 0 16.7449 31.7536 4.96811 6.89314 53.6107 0 33.5846 0 1.09954 0 38.0943 0 0 0 0 0 c 0 0 0 0 0 43.525 22.8541 85.8006 84.3008 38.4297 96.0541 0 99.7269 98.6111 96.1806 22.9896 0 0 0 0 0 g 0 0 0 0 0 18.0164 35.545 3.12185 4.86478 4.50207 0.244269 61.163 0 0.270062 0.865475 15.0068 0 0 0 0 0 t 0 0 0 0 0 21.7136 9.84729 6.10943 3.94129 3.45759 3.70162 5.25245 0.273117 0.0192901 2.9539 23.9092 0 0 0 0 0

M07941_2.00_rc_shift5 (E2F6_rc)
; oligos_6nt_mkv4_m4 versus M07941_2.00_rc (E2F6_rc); m=175/180; ncol2=11; w=-3; offset=-3; strand=R; shift=5; score=0.405361; -----yyTCCCGCccc----- ; cor=; Ncor= a 0 0 0 0 0 8.59379 0 0 0.7812 0 0.3906 7.03121 0 0 19.1406 22.2656 0 0 0 0 0 c 0 0 0 0 0 39.8438 35.5469 0 99.2188 100 99.6094 0 100 63.6719 51.5626 35.1562 0 0 0 0 0 g 0 0 0 0 0 14.4531 0 0 0 0 0 84.7657 0 22.6562 7.03121 21.875 0 0 0 0 0 t 0 0 0 0 0 37.1094 64.4531 100 0 0 0 8.20311 0 13.6719 22.2656 20.7031 0 0 0 0 0

M09502_2.00_shift6 (KLF5)
; oligos_6nt_mkv4_m4 versus M09502_2.00 (KLF5); m=176/180; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.404609; ------GCCmCrCCCw----- ; cor=; Ncor= a 0 0 0 0 0 0 14.8 18.4 2.2 52.6 1.2 49 0.1 0.1 0.1 35.7 0 0 0 0 0 c 0 0 0 0 0 0 1.9 69.4 92.2 40.5 97.2 0.1 99.7 99.7 88.2 22.4 0 0 0 0 0 g 0 0 0 0 0 0 75.6 6 0.1 2.3 0.1 42.8 0.1 0.1 0.1 5.5 0 0 0 0 0 t 0 0 0 0 0 0 7.7 6.2 5.5 4.6 1.5 8.1 0.1 0.1 11.6 36.4 0 0 0 0 0

M04410_2.00_shift6 (KLF5)
; oligos_6nt_mkv4_m4 versus M04410_2.00 (KLF5); m=177/180; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.404534; ------vcCACrCCCh----- ; cor=; Ncor= a 0 0 0 0 0 0 30.3774 20.3306 0 72.2525 1.67921 37.3512 0.641399 4.19825 4.68673 31.3639 0 0 0 0 0 c 0 0 0 0 0 0 26.3522 67.2727 88.4872 20.663 92.1251 3.18452 92.7697 92.7697 78.4904 35.5123 0 0 0 0 0 g 0 0 0 0 0 0 29.7484 5.06887 0 0 0 47.3512 2.91545 0 1.57869 5.65682 0 0 0 0 0 t 0 0 0 0 0 0 13.522 7.32782 11.5128 7.08447 6.19572 12.1131 3.67347 3.03207 15.2442 27.467 0 0 0 0 0

M08327_2.00_shift7 (ZNF610)
; oligos_6nt_mkv4_m4 versus M08327_2.00 (ZNF610); m=178/180; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.404295; -------yGCCGCTCC----- ; cor=; Ncor= a 0 0 0 0 0 0 0 20.4424 4.62466 8.10992 0.0670241 0.0670241 0.0670241 0.0670241 0.0670241 7.84182 0 0 0 0 0 c 0 0 0 0 0 0 0 35.7239 0.0670241 86.9303 99.7989 0.0670241 99.7989 0.0670241 99.7989 75.4021 0 0 0 0 0 g 0 0 0 0 0 0 0 16.9571 91.2198 4.89276 0.0670241 99.7989 0.0670241 0.0670241 0.0670241 5.42895 0 0 0 0 0 t 0 0 0 0 0 0 0 26.8767 4.08847 0.0670241 0.0670241 0.0670241 0.0670241 99.7989 0.0670241 11.3271 0 0 0 0 0

M08894_2.00_shift6 (KLF4)
; oligos_6nt_mkv4_m4 versus M08894_2.00 (KLF4); m=179/180; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.402454; ------rCCmCrCCCw----- ; cor=; Ncor= a 0 0 0 0 0 0 25 6.6 4.8 55.4 0 52.6 0.6 0.6 0.4 35.6 0 0 0 0 0 c 0 0 0 0 0 0 6.8 88.2 88.6 43.8 99.2 0.4 97.8 99.2 98.8 20.4 0 0 0 0 0 g 0 0 0 0 0 0 62.8 3.8 1.6 0.4 0.4 44.4 0.4 0 0 2 0 0 0 0 0 t 0 0 0 0 0 0 5.4 1.4 5 0.4 0.4 2.6 1.2 0.2 0.8 42 0 0 0 0 0

M04455_2.00_shift5 (KLF2)
; oligos_6nt_mkv4_m4 versus M04455_2.00 (KLF2); m=180/180; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.400985; -----srCCmCrCCCw----- ; cor=; Ncor= a 0 0 0 0 0 22.804 40.76 11.9439 7.29676 56.6352 0 33.6164 0 2.58377 1.29796 39.7663 0 0 0 0 0 c 0 0 0 0 0 29.7707 17.9117 74.5003 83.6864 27.754 98.3404 5.41181 98.4871 93.2983 88.2229 24.7079 0 0 0 0 0 g 0 0 0 0 0 28.5591 34.2968 7.97872 3.36773 12.9886 0 57.6733 1.04411 3.93621 2.0042 8.41627 0 0 0 0 0 t 0 0 0 0 0 18.8663 7.0315 5.57705 5.6491 2.62223 1.65957 3.29844 0.468783 0.181671 8.4749 27.1095 0 0 0 0 0

One-to-n matrix alignment; reference matrix: positions_6nt_m3_shift6 ; 247 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
positions_6nt_m3_shift6 (positions_6nt_m3)
; positions_6nt_m3; m=0 (reference); ncol1=11; shift=6; ncol=17; ------wwCATAAAAww ; Alignment reference a 0 0 0 0 0 0 4879 5694 2520 15028 670 14344 15598 15868 14815 5543 5200 c 0 0 0 0 0 0 3935 3936 12502 612 993 727 285 365 595 3615 3791 g 0 0 0 0 0 0 3774 2732 675 238 1260 712 395 247 490 3278 3424 t 0 0 0 0 0 0 4213 4439 1104 923 13878 1018 523 321 901 4365 4386

M03228_2.00_rc_shift6 (HOXC10,HOXC6_rc)
; positions_6nt_m3 versus M03228_2.00_rc (HOXC10,HOXC6_rc); m=1/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.850372; ------scmATwAAam- ; cor=; Ncor= a 0 0 0 0 0 0 22.9881 22.912 29.4875 96.4082 3.01548 63.1884 96.724 90.8811 65.6658 41.8959 0 c 0 0 0 0 0 0 38.4003 47.7654 56.3051 0.571429 0.733496 2.23602 0 5.07888 15.3183 26.4917 0 g 0 0 0 0 0 0 28.6457 6.22851 2.12157 2.61224 0 0 0.12285 1.69296 6.58882 7.65975 0 t 0 0 0 0 0 0 9.96586 23.094 12.0858 0.408163 96.251 34.5756 3.15315 2.34706 12.427 23.9526 0

M09672_2.00_shift7 (HOXC5,HOXC6)
; positions_6nt_m3 versus M09672_2.00 (HOXC5,HOXC6); m=2/246; ncol2=10; w=0; offset=1; strand=D; shift=7; score=0.84276; -------tmATAAAAcm ; cor=; Ncor= a 0 0 0 0 0 0 0 14.2857 30.9524 85.7143 0 83.3333 100 88.6905 72.0238 19.6429 43.4524 c 0 0 0 0 0 0 0 19.0476 61.9048 0 0 0 0 7.7381 5.35714 50.5952 31.5476 g 0 0 0 0 0 0 0 0 0 14.2857 0 7.14286 0 0.595238 2.97619 12.5 10.119 t 0 0 0 0 0 0 0 66.6667 7.14286 0 100 9.52381 0 2.97619 19.6429 17.2619 14.881

M09572_2.00_rc_shift6 (M09572_2.00_rc)
; positions_6nt_m3 versus M09572_2.00_rc; m=3/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.811884; ------GymATAAAay- ; cor=; Ncor= a 0 0 0 0 0 0 20.9 0.1 48.9 99.7 0.1 99.7 99.7 99.7 67.8 24.3 0 c 0 0 0 0 0 0 5.8 44.4 49.3 0.1 0.1 0.1 0.1 0.1 11.5 28.5 0 g 0 0 0 0 0 0 73.3 0.1 0.1 0.1 0.1 0.1 0.1 0.1 7.3 15.4 0 t 0 0 0 0 0 0 0.1 55.4 1.7 0.1 99.7 0.1 0.1 0.1 13.5 31.8 0

M03141_2.00_rc_shift6 (HOXD13_rc)
; positions_6nt_m3 versus M03141_2.00_rc (HOXD13_rc); m=4/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.799989; ------symATAAAAm- ; cor=; Ncor= a 0 0 0 0 0 0 4.59982 1.70455 60.9389 92.4731 0 86.2155 98.9928 99.8549 80.6565 35.3198 0 c 0 0 0 0 0 0 63.2935 57.2443 30.7352 0 0.145138 0 0.431655 0.145138 8.7925 30.0872 0 g 0 0 0 0 0 0 27.0469 0.568182 0 3.62903 0 0 0 0 3.98593 10.6105 0 t 0 0 0 0 0 0 5.0598 40.483 8.32595 3.89785 99.8549 13.7845 0.57554 0 6.56506 23.9826 0

M05104_2.00_rc_shift6 (HOXC5,HOXC6,HOXD9_rc)
; positions_6nt_m3 versus M05104_2.00_rc (HOXC5,HOXC6,HOXD9_rc); m=5/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.783225; ------GymATAAAAm- ; cor=; Ncor= a 0 0 0 0 0 0 14.7175 0.429345 61.6247 98.915 1.00241 80.3284 99.4128 98.9425 76.0228 31.7739 0 c 0 0 0 0 0 0 4.67931 64.9431 33.9785 1.08504 0 0.165688 0 0.732839 8.95937 30.5738 0 g 0 0 0 0 0 0 75.5062 0.0186672 1.86619 0 0 0 0.0745643 0 5.4526 15.3853 0 t 0 0 0 0 0 0 5.09698 34.6089 2.53062 0 98.9976 19.5059 0.512629 0.324675 9.56522 22.267 0

M03229_2.00_rc_shift6 (HOXC10,HOXC6_rc)
; positions_6nt_m3 versus M03229_2.00_rc (HOXC10,HOXC6_rc); m=6/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.776937; ------gymATwAAaw- ; cor=; Ncor= a 0 0 0 0 0 0 16.183 1.12086 53.0742 85.2054 6.59204 62.6422 94.7275 84.9163 58.7729 38.4554 0 c 0 0 0 0 0 0 20.1945 47.8731 37.0883 6.44429 0 1.16339 0.353179 7.21393 13.398 21.2517 0 g 0 0 0 0 0 0 57.0582 0.297097 8.32509 7.1931 0 1.75801 0.782038 2.48756 13.2415 14.6205 0 t 0 0 0 0 0 0 6.56435 50.709 1.51237 1.15725 93.408 34.4364 4.13724 5.38218 14.5876 25.6724 0

M03129_2.00_rc_shift6 (HOXC13_rc)
; positions_6nt_m3 versus M03129_2.00_rc (HOXC13_rc); m=7/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.776692; ------cyAATAAAAm- ; cor=; Ncor= a 0 0 0 0 0 0 8.75 4.50539 69.3231 96.5046 0.312012 88.8112 98.1453 97.6923 79.8742 36.063 0 c 0 0 0 0 0 0 66.1458 62.1939 16.1572 0 0.312012 0 0.309119 1.23077 6.41509 27.874 0 g 0 0 0 0 0 0 19.6875 2.15475 0.10917 0.607903 0.312012 0.699301 0 0 5.15723 12.7559 0 t 0 0 0 0 0 0 5.41667 31.1459 14.4105 2.88754 99.064 10.4895 1.5456 1.07692 8.55346 23.3071 0

M03098_2.00_rc_shift6 (HOXA13_rc)
; positions_6nt_m3 versus M03098_2.00_rc (HOXA13_rc); m=8/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.776239; ------cCmATAAAam- ; cor=; Ncor= a 0 0 0 0 0 0 12.1485 6.32737 55.2463 95.0276 0 82.1656 92.1429 92.1429 58.8369 31.528 0 c 0 0 0 0 0 0 58.0427 70.9766 27.7302 0 3.5514 2.86624 0.892857 5 19.9544 36.7505 0 g 0 0 0 0 0 0 19.685 1.51307 1.39186 0.368324 0 0.636943 1.60714 0 7.63968 8.31721 0 t 0 0 0 0 0 0 10.1237 21.1829 15.6317 4.60405 96.4486 14.3312 5.35714 2.85714 13.569 23.4043 0

M03253_2.00_rc_shift6 (HOXC6_rc)
; positions_6nt_m3 versus M03253_2.00_rc (HOXC6_rc); m=9/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.774991; ------gyaATAAAAa- ; cor=; Ncor= a 0 0 0 0 0 0 16.2188 1.85654 65.8694 93.9361 3.04963 73.7947 98.8604 94.0379 76.2135 47.3912 0 c 0 0 0 0 0 0 11.3017 46.9198 22.5892 2.86952 0 0.311968 0 1.27371 7.35779 20.5823 0 g 0 0 0 0 0 0 66.133 0.534459 6.83371 2.5176 0.748544 1.27623 0 1.54472 6.45728 10.4353 0 t 0 0 0 0 0 0 6.34648 50.6892 4.70767 0.676773 96.2018 24.6171 1.1396 3.14363 9.97145 21.5912 0

M03247_2.00_rc_shift6 (M03247_2.00_rc)
; positions_6nt_m3 versus M03247_2.00_rc; m=10/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.772814; ------syaATAAAah- ; cor=; Ncor= a 0 0 0 0 0 0 7.83909 4.30162 67.7388 95.208 0 85.9241 98.0447 96.517 64.4037 34.6464 0 c 0 0 0 0 0 0 54.3063 53.2895 16.8221 0 0.0473709 0.489596 0 2.38313 17.7982 30.3749 0 g 0 0 0 0 0 0 31.64 0 0 0.271248 0.189484 2.24398 0 0.091659 5.04587 8.68533 0 t 0 0 0 0 0 0 6.21454 42.4089 15.439 4.5208 99.7631 11.3423 1.95531 1.00825 12.7523 26.2933 0

M05334_2.00_rc_shift6 (HOXC5,HOXC6,HOXC9_rc)
; positions_6nt_m3 versus M05334_2.00_rc (HOXC5,HOXC6,HOXC9_rc); m=11/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.772217; ------GymATWAAAy- ; cor=; Ncor= a 0 0 0 0 0 0 9.82014 0 61.6409 95.1728 1.78371 73.9996 99.2772 99.747 69.4269 23.6483 0 c 0 0 0 0 0 0 7.97769 54.1721 33.6645 1.53379 0 0.223985 0 0 11.592 33.6769 0 g 0 0 0 0 0 0 76.6059 0 0.0655539 3.20772 0 0 0 0 7.4459 14.2495 0 t 0 0 0 0 0 0 5.59629 45.8279 4.62912 0.0856431 98.2163 25.7764 0.722813 0.252958 11.5352 28.4254 0

M09134_2.00_rc_shift6 (HOXA13_rc)
; positions_6nt_m3 versus M09134_2.00_rc (HOXA13_rc); m=12/246; ncol2=11; w=0; offset=0; strand=R; shift=6; score=0.77117; ------cCaATWAwAyc ; cor=; Ncor= a 0 0 0 0 0 0 3.10345 17.2414 59.3103 82.7586 0 73.7931 93.7931 58.6207 80.6897 22.069 11.2069 c 0 0 0 0 0 0 67.931 76.5517 23.4483 0 0 0 0 12.4138 19.3103 37.2414 50.5172 g 0 0 0 0 0 0 18.9655 6.2069 6.2069 17.2414 0 0 0 0 0 6.2069 19.4828 t 0 0 0 0 0 0 10 0 11.0345 0 100 26.2069 6.2069 28.9655 0 34.4828 18.7931

M09202_2.00_rc_shift6 (M09202_2.00_rc)
; positions_6nt_m3 versus M09202_2.00_rc; m=13/246; ncol2=11; w=0; offset=0; strand=R; shift=6; score=0.77117; ------cCaATWAwAyc ; cor=; Ncor= a 0 0 0 0 0 0 3.10345 17.2414 59.3103 82.7586 0 73.7931 93.7931 58.6207 80.6897 22.069 11.2069 c 0 0 0 0 0 0 67.931 76.5517 23.4483 0 0 0 0 12.4138 19.3103 37.2414 50.5172 g 0 0 0 0 0 0 18.9655 6.2069 6.2069 17.2414 0 0 0 0 0 6.2069 19.4828 t 0 0 0 0 0 0 10 0 11.0345 0 100 26.2069 6.2069 28.9655 0 34.4828 18.7931

M05290_2.00_rc_shift6 (HOXB9,HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M05290_2.00_rc (HOXB9,HOXC5,HOXC6_rc); m=14/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.764718; ------GymATWAAay- ; cor=; Ncor= a 0 0 0 0 0 0 15.6062 1.47826 56.8627 88.7755 0 68.1325 97.416 97.1649 65.3757 20.1413 0 c 0 0 0 0 0 0 3.95177 58.3478 35.2438 1.64835 0 0 0 2.23368 13.6994 31.5371 0 g 0 0 0 0 0 0 75.7535 0.173913 3.46908 7.29984 0 1.92771 0 0.601375 7.74566 14.0459 0 t 0 0 0 0 0 0 4.68855 40 4.42433 2.2763 100 29.9398 2.58398 0 13.1792 34.2756 0

M05109_2.00_rc_shift6 (HOXC5,HOXC6,HOXD9_rc)
; positions_6nt_m3 versus M05109_2.00_rc (HOXC5,HOXC6,HOXD9_rc); m=15/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.763206; ------GymATAAAAh- ; cor=; Ncor= a 0 0 0 0 0 0 6.77436 0 61.4965 96.0721 1.2969 75.0046 99.2539 100 74.4619 25.356 0 c 0 0 0 0 0 0 4.54403 59.5733 32.4827 1.32691 0 0.0366703 0 0 10.0205 35.4703 0 g 0 0 0 0 0 0 85.2684 0.25602 2.53683 2.5775 0 0 0 0 5.53356 13.2555 0 t 0 0 0 0 0 0 3.41324 40.1707 3.48391 0.0234852 98.7031 24.9587 0.746088 0 9.98407 25.9182 0

M08420_2.00_rc_shift5 (M08420_2.00_rc)
; positions_6nt_m3 versus M08420_2.00_rc; m=16/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.762909; -----rgymATAAAAm- ; cor=; Ncor= a 0 0 0 0 0 37.0821 24.9674 0 32.3491 91.9236 0 97.0908 100 100 71.0812 45.419 0 c 0 0 0 0 0 0 14.8068 64.3074 64.0469 0 4.12505 0 0 0 4.99349 32.7833 0 g 0 0 0 0 0 49.6309 60.2258 0 0 8.07642 0 0 0 0 6.38298 0 0 t 0 0 0 0 0 13.287 0 35.6926 3.60399 0 95.8749 2.90925 0 0 17.5423 21.7977 0

M11389_2.00_shift6 (TBP,TBPL2)
; positions_6nt_m3 versus M11389_2.00 (TBP,TBPL2); m=17/246; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.76235; ------yCTWTAAAAr- ; cor=; Ncor= a 0 0 0 0 0 0 22.4551 0 2.46821 72.9993 0 100 92.8144 100 100 29.3413 0 c 0 0 0 0 0 0 29.1168 76.2154 24.9065 0 0 0 0 0 0 10.1796 0 g 0 0 0 0 0 0 18.5629 19.8953 0 0 0 0 0 0 0 45.7335 0 t 0 0 0 0 0 0 29.8653 3.8893 72.6253 27.0007 100 0 7.18563 0 0 14.7455 0

M03100_2.00_rc_shift6 (HOXA13_rc)
; positions_6nt_m3 versus M03100_2.00_rc (HOXA13_rc); m=18/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.761842; ------cyaATAAAam- ; cor=; Ncor= a 0 0 0 0 0 0 16.1458 0.262467 66.9377 88.8489 0 89.4928 93.9163 98.8 64.1558 42.1053 0 c 0 0 0 0 0 0 64.3229 64.8294 18.9702 0 0 3.26087 0 1.2 15.5844 29.1498 0 g 0 0 0 0 0 0 18.4896 2.09974 2.43902 0 0 1.81159 0 0 11.4286 9.31174 0 t 0 0 0 0 0 0 1.04167 32.8084 11.6531 11.1511 100 5.43478 6.08365 0 8.83117 19.4332 0

M03175_2.00_rc_shift6 (HOXB13_rc)
; positions_6nt_m3 versus M03175_2.00_rc (HOXB13_rc); m=19/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.759856; ------CCaATAAAAm- ; cor=; Ncor= a 0 0 0 0 0 0 7.41236 3.22043 64.4645 94.4312 0 88.7648 99.3924 96.6632 72.3465 35.5268 0 c 0 0 0 0 0 0 74.418 77.2071 23.1803 0.747029 0.251076 0.702202 0 2.6764 14.308 36.4617 0 g 0 0 0 0 0 0 13.8614 0.388673 0.278164 1.29032 0 0.829876 0 0.0347584 4.37045 6.90399 0 t 0 0 0 0 0 0 4.30827 19.1838 12.077 3.53141 99.7489 9.70316 0.607577 0.625652 8.97503 21.1075 0

M05114_2.00_rc_shift6 (HOXC6,HOXD10_rc)
; positions_6nt_m3 versus M05114_2.00_rc (HOXC6,HOXD10_rc); m=20/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.758577; ------GymATAAAAy- ; cor=; Ncor= a 0 0 0 0 0 0 2.08132 0 66.1914 100 1.91147 85.0044 100 99.8464 80.8458 20.5747 0 c 0 0 0 0 0 0 0 36.6855 32.9939 0 0 0 0 0.15361 9.16252 40.1744 0 g 0 0 0 0 0 0 94.3853 0 0.814664 0 0 0 0 0 3.93864 12.7245 0 t 0 0 0 0 0 0 3.5334 63.3145 0 0 98.0885 14.9956 0 0 6.05307 26.5264 0

M05111_2.00_rc_shift6 (HOXC5,HOXC6,HOXD9_rc)
; positions_6nt_m3 versus M05111_2.00_rc (HOXC5,HOXC6,HOXD9_rc); m=21/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.75617; ------GymATWAAac- ; cor=; Ncor= a 0 0 0 0 0 0 10.1076 0 58.1854 91.6367 1.29834 71.4686 98.4293 94.9747 61.6287 19.037 0 c 0 0 0 0 0 0 6.23039 59.7592 37.84 1.82145 0 0.580232 0 4.73278 14.4755 40.2856 0 g 0 0 0 0 0 0 80.0538 0 0 4.84864 0.0276243 0 0 0 10.4382 17.8331 0 t 0 0 0 0 0 0 3.60825 40.2408 3.97459 1.69318 98.674 27.9512 1.57068 0.292475 13.4576 22.8443 0

M05332_2.00_rc_shift6 (HOXC5,HOXC6,HOXC9_rc)
; positions_6nt_m3 versus M05332_2.00_rc (HOXC5,HOXC6,HOXC9_rc); m=22/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.752566; ------GyMATAAAAm- ; cor=; Ncor= a 0 0 0 0 0 0 1.98058 0 68.1787 99.9668 0.298211 80.33 99.4513 100 84.5367 26.1416 0 c 0 0 0 0 0 0 0.440838 58.2414 29.1385 0 0 0 0.548652 0 6.19767 35.7461 0 g 0 0 0 0 0 0 96.1219 0 0.729596 0.0332226 0 0 0 0 3.27021 13.7122 0 t 0 0 0 0 0 0 1.45668 41.7586 1.95314 0 99.7018 19.67 0 0 5.99539 24.4001 0

M05106_2.00_rc_shift6 (HOXC5,HOXC6,HOXD9_rc)
; positions_6nt_m3 versus M05106_2.00_rc (HOXC5,HOXC6,HOXD9_rc); m=23/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.749744; ------GymATwAAac- ; cor=; Ncor= a 0 0 0 0 0 0 13.8921 0.833611 52.2121 80.5525 1.84818 67.5449 95.7502 89.0153 50.5524 15.0639 0 c 0 0 0 0 0 0 8.66215 60.5869 41.0639 8.12568 0 1.83965 0.193175 6.37534 17.1851 43.3759 0 g 0 0 0 0 0 0 69.4373 0 1.63272 10.5092 0 1.88508 0 1.25711 15.6383 21.0491 0 t 0 0 0 0 0 0 8.00841 38.5795 5.09129 0.812568 98.1518 28.7304 4.05666 3.35229 16.6242 20.5111 0

M05112_2.00_rc_shift6 (HOXC6,HOXD10_rc)
; positions_6nt_m3 versus M05112_2.00_rc (HOXC6,HOXD10_rc); m=24/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.74699; ------GymATAAAay- ; cor=; Ncor= a 0 0 0 0 0 0 4.5835 0 58.1965 98.303 0.710702 79.0613 100 97.0973 60.4787 18.9474 0 c 0 0 0 0 0 0 0 57.702 39.0591 0 0 0 0 2.04415 15.2024 37.4316 0 g 0 0 0 0 0 0 94.6592 0 1.9603 1.69702 0 0 0 0 11.7647 16.5895 0 t 0 0 0 0 0 0 0.757274 42.298 0.784122 0 99.2893 20.9387 0 0.858545 12.5541 27.0316 0

M03252_2.00_rc_shift6 (HOXC6_rc)
; positions_6nt_m3 versus M03252_2.00_rc (HOXC6_rc); m=25/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.744204; ------gTCrTWAAAw- ; cor=; Ncor= a 0 0 0 0 0 0 23.7829 0.72904 8.37809 50.095 0 71.8204 97.284 94.0334 71.3122 47.0812 0 c 0 0 0 0 0 0 13.328 3.52369 84.6402 0 0 1.24688 0 3.22196 9.04977 20.3046 0 g 0 0 0 0 0 0 62.8891 0 1.28894 49.905 0.126743 0.498753 0 0 5.42986 6.34518 0 t 0 0 0 0 0 0 0 95.7473 5.6928 0 99.8733 26.4339 2.71605 2.74463 14.2081 26.269 0

M05078_2.00_rc_shift5 (HOXC11_rc)
; positions_6nt_m3 versus M05078_2.00_rc (HOXC11_rc); m=26/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.738763; -----rgymATAAAam- ; cor=; Ncor= a 0 0 0 0 0 32.6068 14.0663 0 44.0869 91.452 0 75.0962 99.2376 96.5389 62.48 26.7136 0 c 0 0 0 0 0 13.993 15.8044 47.7927 48.6311 0.87822 0 1.25 0 2.47219 15.28 37.476 0 g 0 0 0 0 0 35.4839 63.1366 0 1.35478 7.37705 0 0 0.508259 0.123609 5.4 14.8623 0 t 0 0 0 0 0 17.9163 6.99272 52.2073 5.92718 0.29274 100 23.6538 0.25413 0.865266 16.84 20.9481 0

M03134_2.00_rc_shift5 (HOXC11_rc)
; positions_6nt_m3 versus M03134_2.00_rc (HOXC11_rc); m=27/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.736761; -----rgymATAAAam- ; cor=; Ncor= a 0 0 0 0 0 37.6102 17.3513 1.68067 46.2619 83.0757 7.16814 73.4675 91.8165 90.1943 66.3849 37.3777 0 c 0 0 0 0 0 13.4182 15.0828 57.8898 42.9089 0.895037 0 5.3065 0 6.00707 14.0442 26.0274 0 g 0 0 0 0 0 32.9089 62.5996 2.98786 7.65745 9.03173 2.47788 1.18939 0.44964 0 5.0065 17.319 0 t 0 0 0 0 0 16.0627 4.96628 37.4416 3.17173 6.99756 90.354 20.0366 7.73381 3.79859 14.5644 19.2759 0

M05117_2.00_shift5 (HOXC6,HOXD10)
; positions_6nt_m3 versus M05117_2.00 (HOXC6,HOXD10); m=28/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.736163; -----grymATAAAAh- ; cor=; Ncor= a 0 0 0 0 0 22.9161 33.1789 2.23572 67.5634 98.1169 5.1393 87.2968 99.9427 97.7324 82.9807 33.6293 0 c 0 0 0 0 0 10.0831 10.0556 31.4656 30.2303 0.140528 0 0 0.0572574 0 6.8695 33.1997 0 g 0 0 0 0 0 55.3423 53.9234 1.40767 1.35475 1.74255 0.432783 0 0 0.167973 3.56549 8.1352 0 t 0 0 0 0 0 11.6586 2.84214 64.891 0.851558 0 94.4279 12.7032 0 2.09966 6.58426 25.0358 0

M03282_2.00_rc_shift6 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M03282_2.00_rc (HOXC5,HOXC6_rc); m=29/246; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.733993; ------scmATwAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 14.9888 23.1231 32.4675 71.6312 0 58.5507 81.4516 81.4516 66.8317 0 0 c 0 0 0 0 0 0 45.1902 60.6607 65.5844 0 6.48148 8.69565 14.1129 4.43548 14.3564 0 0 g 0 0 0 0 0 0 33.1096 0 1.94805 18.7943 0 0 0 0 15.3465 0 0 t 0 0 0 0 0 0 6.71141 16.2162 0 9.57447 93.5185 32.7536 4.43548 14.1129 3.46535 0 0

M03283_2.00_rc_shift6 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M03283_2.00_rc (HOXC5,HOXC6_rc); m=30/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.733572; ------gymATwAAaw- ; cor=; Ncor= a 0 0 0 0 0 0 23.2919 4.75248 63.1922 83.6207 5.88235 50.2538 91.0798 93.2692 63.8158 42.5641 0 c 0 0 0 0 0 0 13.6646 54.4554 25.0814 0.862069 3.16742 1.52284 0.938967 3.36538 8.55263 14.359 0 g 0 0 0 0 0 0 60.2484 2.37624 11.7264 13.3621 3.16742 0 0 0 13.1579 9.74359 0 t 0 0 0 0 0 0 2.79503 38.4158 0 2.15517 87.7828 48.2234 7.98122 3.36538 14.4737 33.3333 0

M09433_2.00_shift7 (TBPL2)
; positions_6nt_m3 versus M09433_2.00 (TBPL2); m=31/246; ncol2=10; w=0; offset=1; strand=D; shift=7; score=0.732607; -------sTATAAAArs ; cor=; Ncor= a 0 0 0 0 0 0 0 16.4 13.4 76.8 3.6 91.4 85.2 94.6 76.2 40.8 11.4 c 0 0 0 0 0 0 0 50.4 11.4 1.6 4.4 3 1.8 0 0.6 1.8 37 g 0 0 0 0 0 0 0 27.4 4.8 2.4 10.2 3.6 1 5 7.2 53.8 43 t 0 0 0 0 0 0 0 5.8 70.4 19.2 81.8 2 12 0.4 16 3.6 8.6

M03085_2.00_rc_shift5 (HOXA9,HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M03085_2.00_rc (HOXA9,HOXC5,HOXC6_rc); m=32/246; ncol2=12; w=-1; offset=-1; strand=R; shift=5; score=0.727722; -----rrTCrTWAAaww ; cor=; Ncor= a 0 0 0 0 0 29.5966 28.7476 3.49068 8.20513 40.4593 0.861498 70.9492 97.9058 92.0238 55.305 30.7418 26.8939 c 0 0 0 0 0 17.7179 14.2228 6.78302 88.5207 0.0918635 0 0.507726 0 2.46053 14.9353 23.2346 20.41 g 0 0 0 0 0 33.3853 56.4884 0.714002 0.0788955 58.8976 0 0.441501 0 0.51261 9.31608 16.0392 21.2344 t 0 0 0 0 0 19.3002 0.541221 89.0123 3.19527 0.551181 99.1385 28.1015 2.09424 5.00308 20.4436 29.9844 31.4617

M03230_2.00_rc_shift6 (HOXC10,HOXC6_rc)
; positions_6nt_m3 versus M03230_2.00_rc (HOXC10,HOXC6_rc); m=33/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.725982; ------rTCrTwAAaw- ; cor=; Ncor= a 0 0 0 0 0 0 25.9324 0.746697 8.53659 44.8716 0.833848 67.2152 96.6877 90.1966 59.8732 30.7597 0 c 0 0 0 0 0 0 18.1093 7.03619 87.019 0.102058 0 0.155231 0.0903342 2.13483 10.2741 21.1395 0 g 0 0 0 0 0 0 55.6982 0 0.325203 54.6181 0 0.124185 0.150557 2.41573 9.91982 14.1034 0 t 0 0 0 0 0 0 0.260191 92.2171 4.11924 0.408233 99.1662 32.5054 3.07136 5.25281 19.9329 33.9975 0

M03132_2.00_rc_shift5 (HOXC11_rc)
; positions_6nt_m3 versus M03132_2.00_rc (HOXC11_rc); m=34/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.725863; -----rgymATwAAaw- ; cor=; Ncor= a 0 0 0 0 0 38.2692 23.0514 3.31594 52.1985 76.1924 7.26854 67.8743 90.2529 88.7054 62.8371 36.3894 0 c 0 0 0 0 0 11.2963 15.9764 48.443 32.8983 7.53952 0 1.23626 1.34443 5.41136 12.0348 23.036 0 g 0 0 0 0 0 30.3245 52.0155 1.76738 6.47042 11.4579 0 1.94025 1.02433 1.44722 8.5692 14.7367 0 t 0 0 0 0 0 20.1099 8.95674 46.4737 8.43284 4.81016 92.7315 28.9492 7.37836 4.43605 16.5589 25.8379 0

M00253_2.00_shift6 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1)
; positions_6nt_m3 versus M00253_2.00 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1); m=35/246; ncol2=11; w=0; offset=0; strand=D; shift=6; score=0.725765; ------tgwATAAwyAa ; cor=; Ncor= a 0 0 0 0 0 0 19.9681 17.6087 26.8585 80.7059 0.028741 89.438 89.8691 59.4016 24.5082 77.74 46.8931 c 0 0 0 0 0 0 19.9681 17.6087 17.8925 0.028741 0.028741 0.028741 10.0734 0.028741 35.6583 7.41999 17.7023 g 0 0 0 0 0 0 19.9681 47.1738 7.32644 19.2366 0.028741 0.028741 0.028741 9.48884 5.06064 7.41999 17.7023 t 0 0 0 0 0 0 40.0957 17.6087 47.9225 0.028741 99.9138 10.5045 0.028741 31.0808 34.7728 7.41999 17.7023

M03196_2.00_rc_shift6 (CDX2_rc)
; positions_6nt_m3 versus M03196_2.00_rc (CDX2_rc); m=36/246; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.725185; ------gymATAAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 23.0595 3.59152 52.8683 90.4723 1.19469 92.4465 93.1107 92.3303 55.9437 0 0 c 0 0 0 0 0 0 18.4748 51.1034 38.052 0.533881 1.0177 0.96517 0 1.96982 20.6443 0 0 g 0 0 0 0 0 0 53.8357 1.08178 1.11432 8.9117 0.309735 0.125892 0.845309 2.13747 10.2541 0 0 t 0 0 0 0 0 0 4.63005 44.2233 7.96533 0.0821355 97.4779 6.46244 6.04396 3.56245 13.1579 0 0

M05076_2.00_rc_shift5 (HOXC11_rc)
; positions_6nt_m3 versus M05076_2.00_rc (HOXC11_rc); m=37/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.723696; -----rGymATWAAah- ; cor=; Ncor= a 0 0 0 0 0 30.2594 12.2415 0 44.0268 85.3491 0 73.2003 99.5993 97.9851 63.1921 26.2852 0 c 0 0 0 0 0 11.8156 10.8072 46.5802 47.963 2.82335 0.0893256 0.719895 0 0.175208 12.5141 32.4989 0 g 0 0 0 0 0 41.3705 74.6164 0 3.32612 11.8275 0 0 0 0 7.23164 16.1824 0 t 0 0 0 0 0 16.5546 2.33489 53.4198 4.68412 0 99.9107 26.0798 0.400712 1.83968 17.0621 25.0335 0

M03275_2.00_rc_shift5 (M03275_2.00_rc)
; positions_6nt_m3 versus M03275_2.00_rc; m=38/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.723036; -----rgymATwAAah- ; cor=; Ncor= a 0 0 0 0 0 25.2475 17.3719 0 43.6285 72.2719 6.91244 58.4323 94.6136 91.8182 56.9014 28.2178 0 c 0 0 0 0 0 18.5644 23.3853 52.3342 45.0324 16.6369 0 3.32542 0 7.04545 19.2958 25.2475 0 g 0 0 0 0 0 39.604 44.9889 0.982801 8.09935 10.9123 0 0.950119 0 0.909091 10.7042 17.8218 0 t 0 0 0 0 0 16.5842 14.2539 46.683 3.23974 0.178891 93.0876 37.2922 5.38642 0.227273 13.0986 28.7129 0

M05080_2.00_rc_shift5 (HOXC11_rc)
; positions_6nt_m3 versus M05080_2.00_rc (HOXC11_rc); m=39/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.722439; -----rgymATwAAam- ; cor=; Ncor= a 0 0 0 0 0 28.7001 11.8873 2.21811 41.5228 78.7202 0 67.2173 95.8333 95.3153 58.5825 26.9811 0 c 0 0 0 0 0 14.6718 16.6667 59.7043 48.2732 6.84524 0 4.7014 0 0.900901 17.165 34.3396 0 g 0 0 0 0 0 39.3822 64.8284 0.184843 4.23862 13.9881 0.56391 0 0.181159 2.16216 6.97674 16.9811 0 t 0 0 0 0 0 17.2458 6.61765 37.8928 5.96546 0.446429 99.4361 28.0813 3.98551 1.62162 17.2757 21.6981 0

M04900_2.00_rc_shift5 (HOXA11_rc)
; positions_6nt_m3 versus M04900_2.00_rc (HOXA11_rc); m=40/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.717033; -----rGymATAAAay- ; cor=; Ncor= a 0 0 0 0 0 34.1365 3.94737 0 49.2754 86.7347 0 80.1887 97.1429 93.9227 60.9319 20.5882 0 c 0 0 0 0 0 12.0482 13.5965 50 44.6377 0 0 0 0 2.20994 8.96057 30.5882 0 g 0 0 0 0 0 34.1365 74.5614 0 3.47826 10.7143 0 0 0 0 17.5627 11.7647 0 t 0 0 0 0 0 19.6787 7.89474 50 2.6087 2.55102 100 19.8113 2.85714 3.8674 12.5448 37.0588 0

M04898_2.00_rc_shift5 (HOXA11_rc)
; positions_6nt_m3 versus M04898_2.00_rc (HOXA11_rc); m=41/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.716484; -----rgymATaAAah- ; cor=; Ncor= a 0 0 0 0 0 26.5446 10.8647 1.67224 42.0144 74.6803 0 66.8192 96.0526 91.25 57.0312 25.256 0 c 0 0 0 0 0 15.5606 18.1818 49.8328 45.7554 4.85934 0 4.11899 0.657895 7.5 13.8672 33.7884 0 g 0 0 0 0 0 40.5034 64.745 0.334448 7.76978 18.4143 0 4.11899 0 0 10.1562 9.21502 0 t 0 0 0 0 0 17.3913 6.20843 48.1605 4.46043 2.04604 100 24.9428 3.28947 1.25 18.9453 31.7406 0

M03115_2.00_rc_shift6 (CDX1_rc)
; positions_6nt_m3 versus M03115_2.00_rc (CDX1_rc); m=42/246; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.715408; ------gymATAAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 24.1104 3.01607 51.1102 90.5753 0.300623 83.257 90.3634 86.9084 50.1402 0 0 c 0 0 0 0 0 0 16.7889 53.6736 38.8151 1.30872 0.128838 2.69324 0.721037 4.59188 18.8376 0 0 g 0 0 0 0 0 0 52.9545 0.198288 1.9296 7.3933 0 1.00548 0.760012 2.39903 13.554 0 0 t 0 0 0 0 0 0 6.14622 43.1121 8.14506 0.722727 99.5705 13.0443 8.15551 6.10065 17.4682 0 0

M05335_2.00_rc_shift5 (HOXC10,HOXC6_rc)
; positions_6nt_m3 versus M05335_2.00_rc (HOXC10,HOXC6_rc); m=43/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.71339; -----gGymATAAAac- ; cor=; Ncor= a 0 0 0 0 0 18.8 13.1285 0 50 88.968 0 77.2201 100 95.8773 56.4334 16.9 0 c 0 0 0 0 0 23.9 10.6145 58.8412 43.95 3.73665 0 0.15444 0 3.54746 19.6953 43.8 0 g 0 0 0 0 0 40.3 69.8324 0 2.65 5.78292 0 0.15444 0 0.575264 10.4966 17.5 0 t 0 0 0 0 0 17 6.42458 41.1588 3.4 1.51246 100 22.471 0 0 13.3747 21.8 0

M03086_2.00_rc_shift5 (HOXA9,HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M03086_2.00_rc (HOXA9,HOXC5,HOXC6_rc); m=44/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.711995; -----rgymATWAAaa- ; cor=; Ncor= a 0 0 0 0 0 27.6187 17.441 1.78031 56.3391 85.3375 4.18998 69.4072 94.4125 89.1122 59.5199 35.9981 0 c 0 0 0 0 0 16.9769 12.6367 44.9965 30.3576 4.63293 0.125585 0.978223 0.405542 6.03934 14.7859 24.9254 0 g 0 0 0 0 0 35.7075 60.2776 0.686525 6.87013 7.31086 0 1.40911 0.856145 1.32908 11.0788 14.6761 0 t 0 0 0 0 0 19.697 9.64471 52.5367 6.43318 2.71866 95.6844 28.2054 4.32579 3.5194 14.6154 24.4004 0

M05337_2.00_rc_shift5 (HOXC10,HOXC6_rc)
; positions_6nt_m3 versus M05337_2.00_rc (HOXC10,HOXC6_rc); m=45/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.711772; -----gGymATAAAAc- ; cor=; Ncor= a 0 0 0 0 0 19.8486 7.35184 0 60.3247 100 2.13992 90.6941 99.3317 99.8321 75.6843 18.587 0 c 0 0 0 0 0 21.9512 1.80045 45.8754 39.5231 0 0 0 0.668338 0 13.4309 40.286 0 g 0 0 0 0 0 43.9024 89.1973 0 0.152207 0 0 0 0 0.167926 3.50095 20.6056 0 t 0 0 0 0 0 14.2977 1.65041 54.1246 0 0 97.8601 9.30587 0 0 7.38383 20.5214 0

M05129_2.00_rc_shift5 (CDX4_rc)
; positions_6nt_m3 versus M05129_2.00_rc (CDX4_rc); m=46/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.710331; -----gGymATAAAac- ; cor=; Ncor= a 0 0 0 0 0 15.8899 9.35999 0 52.9731 100 0 100 100 99.7567 63.4025 11.6185 0 c 0 0 0 0 0 9.53909 3.93171 62.8295 46.92 0 0 0 0 0.24334 17.6177 49.0157 0 g 0 0 0 0 0 52.0221 86.3462 0 0.10687 0 0 0 0 0 5.88251 16.0818 0 t 0 0 0 0 0 22.5489 0.362131 37.1705 0 0 100 0 0 0 13.0973 23.284 0

M05018_2.00_rc_shift5 (CDX1_rc)
; positions_6nt_m3 versus M05018_2.00_rc (CDX1_rc); m=47/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.708538; -----gGYmATAAAac- ; cor=; Ncor= a 0 0 0 0 0 17.0851 8.8375 0 37.9113 100 0 99.9474 100 99.9001 60.7353 9.38043 0 c 0 0 0 0 0 13.0059 0 70.2284 61.9416 0 0 0 0 0 23.0946 56.2878 0 g 0 0 0 0 0 46.234 91.1481 0.00526371 0.147167 0 0 0.0526094 0 0.0999106 5.39322 14.1759 0 t 0 0 0 0 0 23.6749 0.0143933 29.7663 0 0 100 0 0 0 10.7769 20.1558 0

M03773_2.00_rc_shift5 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M03773_2.00_rc (HOXC5,HOXC6_rc); m=48/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.708288; -----rGymATAAAAm- ; cor=; Ncor= a 0 0 0 0 0 43.5344 8.4259 0 55.9181 95.4386 0.691069 76.9416 99.2712 97.0896 74.5341 32.1098 0 c 0 0 0 0 0 9.31406 3.73973 55.9107 36.6758 1.26259 0 0 0 2.05657 10.6868 34.5186 0 g 0 0 0 0 0 35.5433 85.9481 0 1.68477 3.06525 0 0.517769 0 0.215309 4.33172 9.27583 0 t 0 0 0 0 0 11.6082 1.8863 44.0893 5.72137 0.233543 99.3089 22.5406 0.728763 0.638503 10.4474 24.0957 0

M05105_2.00_shift6 (HOXC5,HOXC6,HOXD9)
; positions_6nt_m3 versus M05105_2.00 (HOXC5,HOXC6,HOXD9); m=49/246; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.707084; ------rTCRTAAAah- ; cor=; Ncor= a 0 0 0 0 0 0 26.7053 0 0 31.6343 0 83.5984 99.3468 98.3487 63.5407 26.089 0 c 0 0 0 0 0 0 10.0474 3.53381 99.9062 0 0 0 0 0 11.4518 30.3041 0 g 0 0 0 0 0 0 63.0891 0 0.0938416 68.3657 0 0 0 0 8.0946 12.5631 0 t 0 0 0 0 0 0 0.158144 96.4662 0 0 100 16.4016 0.653214 1.65127 16.9129 31.0438 0

M05395_2.00_rc_shift5 (HOXA10,HOXC6_rc)
; positions_6nt_m3 versus M05395_2.00_rc (HOXA10,HOXC6_rc); m=50/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.704898; -----gGymATAAAAm- ; cor=; Ncor= a 0 0 0 0 0 19.511 5.65533 0 66.6963 99.2672 1.43147 89.1947 100 99.9154 85.0716 29.735 0 c 0 0 0 0 0 9.82813 1.38316 38.8708 31.4553 0 0 0 0 0.0846433 6.3832 32.7484 0 g 0 0 0 0 0 60.4696 92.1695 0.108814 0.968601 0.732821 0 0 0 0 4.02553 14.6073 0 t 0 0 0 0 0 10.1912 0.791969 61.0204 0.879813 0 98.5685 10.8053 0 0 4.51972 22.9094 0

M05397_2.00_rc_shift5 (HOXA10,HOXC6_rc)
; positions_6nt_m3 versus M05397_2.00_rc (HOXA10,HOXC6_rc); m=51/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.704496; -----gGymATAAAAc- ; cor=; Ncor= a 0 0 0 0 0 21.045 6.6766 0 66.0948 99.4622 5.32423 83.0042 98.8596 99.3553 73.5419 24.297 0 c 0 0 0 0 0 18.1261 6.05067 40.1512 31.6893 0 0 0.179533 0 0.644699 10.6045 37.0584 0 g 0 0 0 0 0 48.8649 82.6826 0.10803 0.476531 0.537827 0 0.867744 0.0712758 0 5.27572 13.951 0 t 0 0 0 0 0 11.964 4.59016 59.7407 1.73934 0 94.6758 15.9485 1.06914 0 10.5779 24.6936 0

M09581_2.00_rc_shift6 (HOXC6_rc)
; positions_6nt_m3 versus M09581_2.00_rc (HOXC6_rc); m=52/246; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.704363; ------cCCATtAAAt- ; cor=; Ncor= a 0 0 0 0 0 0 12.3 9.1 12.3 94.2 13.5 22.8 76.4 84.4 69.5 16.5 0 c 0 0 0 0 0 0 65.9 70.2 85.2 2.2 1.5 9.5 10.5 8.3 5.7 21.6 0 g 0 0 0 0 0 0 18.4 5.3 0.7 2 1.3 2.3 2.7 2 2.3 1.4 0 t 0 0 0 0 0 0 3.4 15.4 1.8 1.6 83.7 65.4 10.4 5.3 22.5 60.5 0

M05339_2.00_rc_shift5 (HOXC10,HOXC6_rc)
; positions_6nt_m3 versus M05339_2.00_rc (HOXC10,HOXC6_rc); m=53/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.703895; -----gGymATAAAAy- ; cor=; Ncor= a 0 0 0 0 0 22.6127 5.74952 0 63.9614 99.3696 1.03513 88.3101 100 100 78.5666 21.8107 0 c 0 0 0 0 0 15.0351 0.256246 46.2963 36.0386 0 0 0 0 0 9.26849 38.4259 0 g 0 0 0 0 0 46.4255 93.4017 0 0 0.630431 0 0 0 0 4.27051 13.9918 0 t 0 0 0 0 0 15.9266 0.592569 53.7037 0 0 98.9649 11.6899 0 0 7.89438 25.7716 0

M00394_2.00_rc_shift6 (M00394_2.00_rc)
; positions_6nt_m3 versus M00394_2.00_rc; m=54/246; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.702046; ------cymrtaAaw-- ; cor=; Ncor= a 0 0 0 0 0 0 20.9474 16.1811 29.3897 46.8319 10.3931 51.8823 69.4873 63.7168 36.6209 0 0 c 0 0 0 0 0 0 37.4129 31.9395 34.8357 9.93997 14.8967 10.4749 4.76427 11.64 20.71 0 0 g 0 0 0 0 0 0 24.8291 12.4764 11.7123 32.6735 13.0807 13.8596 11.1467 8.45238 15.8096 0 0 t 0 0 0 0 0 0 16.8107 39.403 24.0622 10.5546 61.6295 23.7832 14.6018 16.1909 26.8595 0 0

M00298_2.00_rc_shift6 (HOXD13_rc)
; positions_6nt_m3 versus M00298_2.00_rc (HOXD13_rc); m=55/246; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.699274; ------cyhrTwAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 19.2222 16.3719 33.1819 64.2146 3.11498 60.0605 79.1532 75.984 40.5661 0 0 c 0 0 0 0 0 0 36.0918 39.8678 29.7255 2.29844 6.2728 4.32907 3.03857 8.17044 20.347 0 0 g 0 0 0 0 0 0 21.6729 9.44578 6.76664 28.0007 0.0332474 6.08211 5.11095 4.01695 14.4824 0 0 t 0 0 0 0 0 0 23.0131 34.3145 30.326 5.48617 90.579 29.5284 12.6973 11.8286 24.6046 0 0

M05119_2.00_shift5 (HOXC6,HOXD10)
; positions_6nt_m3 versus M05119_2.00 (HOXC6,HOXD10); m=56/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.698314; -----gGYAATAAAAh- ; cor=; Ncor= a 0 0 0 0 0 23.2891 9.95851 0 77.8219 100 2.1978 91.5809 100 99.5931 88.7579 29.6221 0 c 0 0 0 0 0 11.5424 8.79668 30.4392 22.1781 0 0 0 0 0 9.15684 34.525 0 g 0 0 0 0 0 50.8682 81.2448 0 0 0 0 0 0 0 2.08522 8.27375 0 t 0 0 0 0 0 14.3003 0 69.5608 0 0 97.8022 8.41908 0 0.406918 0 27.5792 0

M05341_2.00_rc_shift5 (HOXC10,HOXC6_rc)
; positions_6nt_m3 versus M05341_2.00_rc (HOXC10,HOXC6_rc); m=57/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.697288; -----rGymATAAAAc- ; cor=; Ncor= a 0 0 0 0 0 28.4666 0 0 67.4123 100 4.503 94.1467 99.6173 100 95.5289 19.4969 0 c 0 0 0 0 0 12.2599 0 46.1753 32.5877 0 0 0 0.208768 0 1.66834 45.5276 0 g 0 0 0 0 0 46.1404 100 0 0 0 0 0 0.173974 0 0 11.4605 0 t 0 0 0 0 0 13.1331 0 53.8247 0 0 95.497 5.85334 0 0 2.8028 23.515 0

M05124_2.00_rc_shift5 (HOXD13_rc)
; positions_6nt_m3 versus M05124_2.00_rc (HOXD13_rc); m=58/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.69721; -----rsyAATAAAac- ; cor=; Ncor= a 0 0 0 0 0 36.4912 17.084 2.31729 71.1932 95.1301 0 87.0574 98.8904 94.0633 59.6902 23.8596 0 c 0 0 0 0 0 24.2105 48.9194 63.5472 18.7718 0 0 0 0 2.90237 20.3851 45.5439 0 g 0 0 0 0 0 28.9825 28.9194 0.935829 0 1.33422 0 0.610501 0 0.395778 3.9347 8.77193 0 t 0 0 0 0 0 10.3158 5.07719 33.1996 10.0349 3.53569 100 12.3321 1.10957 2.63852 15.99 21.8246 0

M04981_2.00_rc_shift5 (HOXA13_rc)
; positions_6nt_m3 versus M04981_2.00_rc (HOXA13_rc); m=59/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.697207; -----mCYaATAAAAm- ; cor=; Ncor= a 0 0 0 0 0 29.6263 4.7443 1.00566 67.8744 97.316 0 91.7551 98.2517 95.9863 68.5784 27.6444 0 c 0 0 0 0 0 32.8292 69.2545 70.6474 20.1691 0 0 0 0.437063 1.87874 13.1788 36.4444 0 g 0 0 0 0 0 18.0605 20.5176 0 0.966184 0.865801 0 0 0.786713 0 5.2471 11.5556 0 t 0 0 0 0 0 19.484 5.48367 28.347 10.9903 1.81818 100 8.2449 0.524476 2.13493 12.9957 24.3556 0

M06211_2.00_shift7 (HOXC5,HOXC6)
; positions_6nt_m3 versus M06211_2.00 (HOXC5,HOXC6); m=60/246; ncol2=8; w=0; offset=1; strand=D; shift=7; score=0.695049; -------yCATAAAA-- ; cor=; Ncor= a 0 0 0 0 0 0 0 14.2857 14.2857 85.7143 0 100 100 85.7143 71.4286 0 0 c 0 0 0 0 0 0 0 28.5714 71.4286 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 14.2857 14.2857 0 0 0 0 14.2857 0 0 t 0 0 0 0 0 0 0 57.1429 0 0 100 0 0 14.2857 14.2857 0 0

M04979_2.00_rc_shift5 (HOXA13_rc)
; positions_6nt_m3 versus M04979_2.00_rc (HOXA13_rc); m=61/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.691647; -----asYAATAAAAm- ; cor=; Ncor= a 0 0 0 0 0 30.6698 7.80094 0.940975 74.6491 94.9777 0 96.376 95.9414 94.5556 70.5638 30.4462 0 c 0 0 0 0 0 24.9119 57.2293 72.7973 17.0175 0 0 0 0 2.11111 18.6567 44.007 0 g 0 0 0 0 0 22.7967 28.1103 0 0 2.79018 0 0 0 0 3.56551 6.3867 0 t 0 0 0 0 0 21.6216 6.85945 26.2618 8.33333 2.23214 100 3.62401 4.05862 3.33333 7.21393 19.1601 0

M05401_2.00_rc_shift5 (HOXA10,HOXC6_rc)
; positions_6nt_m3 versus M05401_2.00_rc (HOXA10,HOXC6_rc); m=62/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.691454; -----sgymATWAAay- ; cor=; Ncor= a 0 0 0 0 0 16.0587 15.9703 0 51.6077 88.7441 1.01322 68.2979 95.3331 89.3795 42.126 16.4146 0 c 0 0 0 0 0 26.7349 13.359 51.0458 40.0092 2.48815 0 0.668693 0.466695 6.88146 24.2782 38.2117 0 g 0 0 0 0 0 34.4751 61.7647 0 3.55994 8.76777 0 1.00304 0 0 16.5917 20.0623 0 t 0 0 0 0 0 22.7313 8.90599 48.9542 4.82315 0 98.9868 30.0304 4.20025 3.73906 17.0041 25.3114 0

M05131_2.00_rc_shift5 (CDX4_rc)
; positions_6nt_m3 versus M05131_2.00_rc (CDX4_rc); m=63/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.68949; -----kGCmATAAAac- ; cor=; Ncor= a 0 0 0 0 0 13.5135 2.36453 0 51.5252 100 0 98.4791 96.2825 97.125 54.1086 9.90991 0 c 0 0 0 0 0 19.8198 19.9015 80.0515 44.0981 0 0 1.52091 0 2 23.1894 55.3411 0 g 0 0 0 0 0 41.3127 76.5517 0 0.132626 0 0 0 0 0 10.585 17.6319 0 t 0 0 0 0 0 25.3539 1.18227 19.9485 4.24403 0 100 0 3.71747 0.875 12.117 17.1171 0

M05201_2.00_rc_shift5 (HOXB13_rc)
; positions_6nt_m3 versus M05201_2.00_rc (HOXB13_rc); m=64/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.686729; -----cCCmATAAAAc- ; cor=; Ncor= a 0 0 0 0 0 21.972 4.75647 0.807409 63.2717 99.3572 0 98.4709 99.9224 99.8708 74.5946 16.8219 0 c 0 0 0 0 0 44.7723 73.516 91.7597 27.493 0 0 0 0 0 15.0965 52.3551 0 g 0 0 0 0 0 20.0828 16.0769 0 0.294744 0.411417 0 0 0 0.129232 3.35907 8.46273 0 t 0 0 0 0 0 13.1729 5.65068 7.43291 8.94056 0.231422 100 1.52905 0.0775795 0 6.94981 22.3602 0

M05289_2.00_shift6 (HOXB9,HOXC5,HOXC6)
; positions_6nt_m3 versus M05289_2.00 (HOXB9,HOXC5,HOXC6); m=65/246; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.685609; ------gTCRTAAAat- ; cor=; Ncor= a 0 0 0 0 0 0 22.6511 0 0 25.8427 0 79.4308 100 96.8964 65.2266 22.6384 0 c 0 0 0 0 0 0 10.1966 2.28117 100 0.24077 0 0.517464 0 2.20936 10.4462 24.8643 0 g 0 0 0 0 0 0 67.0794 0 0 73.9165 0.0542594 0.129366 0 0 7.11756 14.1694 0 t 0 0 0 0 0 0 0.0728332 97.7188 0 0 99.9457 19.9224 0 0.894266 17.2096 38.3279 0

M03781_2.00_rc_shift4 (M03781_2.00_rc)
; positions_6nt_m3 versus M03781_2.00_rc; m=66/246; ncol2=12; w=-2; offset=-2; strand=R; shift=4; score=0.683272; ----rgGyMATAAAay- ; cor=; Ncor= a 0 0 0 0 31.0653 23.6664 20.877 0.316355 25.9129 92.3276 0 99.6273 99.405 99.5623 53.0699 23.0676 0 c 0 0 0 0 15.0533 11.0271 1.94934 37.5243 72.1701 0 0.0280505 0 0 0.0884626 20.5144 30.3858 0 g 0 0 0 0 38.0845 44.5416 77.0511 0.0957771 0.590618 7.67238 0 0.0372717 0 0.0372474 6.85995 19.6119 0 t 0 0 0 0 15.7969 20.7649 0.122509 62.0636 1.32636 0 99.9719 0.335445 0.595017 0.311947 19.5558 26.9348 0

M05108_2.00_shift6 (HOXC5,HOXC6,HOXD9)
; positions_6nt_m3 versus M05108_2.00 (HOXC5,HOXC6,HOXD9); m=67/246; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.683108; ------gTCGTAAAay- ; cor=; Ncor= a 0 0 0 0 0 0 24.0557 0.203179 0.991135 23.4617 0.00621736 83.4873 99.4743 99.1676 61.5994 22.017 0 c 0 0 0 0 0 0 11.2474 3.6871 99.0089 0 0 0 0.0371103 0.147984 12.7274 33.3396 0 g 0 0 0 0 0 0 64.6969 0 0 76.5383 0 0 0.0185552 0.0801578 7.75978 14.1081 0 t 0 0 0 0 0 0 0 96.1097 0 0 99.9938 16.5127 0.470064 0.604267 17.9134 30.5353 0

M00473_2.00_rc_shift6 (M00473_2.00_rc)
; positions_6nt_m3 versus M00473_2.00_rc; m=68/246; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.68272; ------cyhrTwAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 19.4856 13.1413 30.013 50.6222 8.03624 59.2412 77.9309 70.809 37.5845 0 0 c 0 0 0 0 0 0 42.0844 35.0145 38.154 3.47082 9.06083 5.82184 3.72782 10.5908 21.9023 0 0 g 0 0 0 0 0 0 24.2806 8.21337 6.7641 38.2594 1.94247 7.78047 5.96448 6.17177 16.0642 0 0 t 0 0 0 0 0 0 14.1495 43.6308 25.0689 7.64758 80.9605 27.1565 12.3768 12.4284 24.449 0 0

M05072_2.00_rc_shift5 (HOXC13_rc)
; positions_6nt_m3 versus M05072_2.00_rc (HOXC13_rc); m=69/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.682607; -----vsCmATAAAac- ; cor=; Ncor= a 0 0 0 0 0 25.2271 6.89233 0 66.8537 100 0 99.1678 100 100 64.1256 6.78322 0 c 0 0 0 0 0 31.4465 58.3197 86.9301 25.9 0 0 0.832178 0 0 23.1839 58.1119 0 g 0 0 0 0 0 30.6778 28.4666 0 0.233754 0 0 0 0 0 3.5426 13.6364 0 t 0 0 0 0 0 12.6485 6.32137 13.0699 7.01262 0 100 0 0 0 9.14798 21.4685 0

M03206_2.00_shift6 (HOXD12)
; positions_6nt_m3 versus M03206_2.00 (HOXD12); m=70/246; ncol2=9; w=0; offset=0; strand=D; shift=6; score=0.68227; ------gYaATAAAA-- ; cor=; Ncor= a 0 0 0 0 0 0 9.65944 0.627178 67.518 92.9666 11.3384 84.647 99.23 91.6444 75.5311 0 0 c 0 0 0 0 0 0 19.257 27.4564 14.6693 4.95942 0.767263 0.574713 0 4.53333 8.13187 0 0 g 0 0 0 0 0 0 63.839 0.0696864 16.8304 1.62308 0 0.246305 0 1.51111 7.98535 0 0 t 0 0 0 0 0 0 7.24458 71.8467 0.982318 0.450857 87.8943 14.532 0.769971 2.31111 8.35165 0 0

M00295_2.00_rc_shift6 (HOXD13_rc)
; positions_6nt_m3 versus M00295_2.00_rc (HOXD13_rc); m=71/246; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.681041; ------syhrTwAaa-- ; cor=; Ncor= a 0 0 0 0 0 0 22.0709 14.9918 31.8881 54.975 3.48303 55.5205 74.4062 65.4176 36.2227 0 0 c 0 0 0 0 0 0 36.0267 35.7842 32.8592 4.74399 9.09663 6.46726 3.12533 12.0708 21.9702 0 0 g 0 0 0 0 0 0 25.3876 10.4594 8.34976 33.344 1.11394 10.9874 6.35689 7.62011 17.2823 0 0 t 0 0 0 0 0 0 16.5148 38.7645 26.9029 6.93706 86.3064 27.0247 16.1116 14.8915 24.5248 0 0

M05331_2.00_shift6 (HOXC5,HOXC6,HOXC9)
; positions_6nt_m3 versus M05331_2.00 (HOXC5,HOXC6,HOXC9); m=72/246; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.680629; ------GTCGTAAAAy- ; cor=; Ncor= a 0 0 0 0 0 0 20.0804 0 0 21.4744 0.0321295 88.1259 100 99.9228 69.1295 20.951 0 c 0 0 0 0 0 0 8.13008 0.937022 100 0 0.0321295 0 0 0.0771555 9.04319 32.411 0 g 0 0 0 0 0 0 71.7895 0 0 78.5256 0.070685 0 0 0 6.07624 14.0982 0 t 0 0 0 0 0 0 0 99.063 0 0 99.8651 11.8741 0 0 15.7511 32.5397 0

M03135_2.00_rc_shift6 (HOXC12_rc)
; positions_6nt_m3 versus M03135_2.00_rc (HOXC12_rc); m=73/246; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.679994; ------gyAATAAAA-- ; cor=; Ncor= a 0 0 0 0 0 0 18.1119 1.02681 74.4832 89.3568 11.6416 84.6756 97.574 97.3543 77.8879 0 0 c 0 0 0 0 0 0 11.7285 38.5625 11.9509 1.18832 0 1.12607 0.0846262 1.12581 8.57915 0 0 g 0 0 0 0 0 0 66.5064 0.34227 11.025 7.98243 0.0510595 0.709914 0.0564175 0.168871 5.56181 0 0 t 0 0 0 0 0 0 3.65314 60.0685 2.54091 1.47249 88.3074 13.4884 2.28491 1.35097 7.97118 0 0

M00299_2.00_rc_shift6 (HOXD13_rc)
; positions_6nt_m3 versus M00299_2.00_rc (HOXD13_rc); m=74/246; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.678685; ------syhrTwAaa-- ; cor=; Ncor= a 0 0 0 0 0 0 21.8939 14.6424 31.4466 53.0003 5.01695 55.227 74.4324 66.2348 36.427 0 0 c 0 0 0 0 0 0 36.097 36.3765 32.73 5.42109 9.80432 6.62898 2.80076 12.2216 21.8742 0 0 g 0 0 0 0 0 0 25.951 10.7394 8.48494 34.4772 0.164117 11.2622 6.48759 6.91164 17.0357 0 0 t 0 0 0 0 0 0 16.058 38.2416 27.3384 7.10144 85.0146 26.8819 16.2793 14.6319 24.6631 0 0

M05085_2.00_shift5 (HOXC12)
; positions_6nt_m3 versus M05085_2.00 (HOXC12); m=75/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.678131; -----rGYAATAAAAh- ; cor=; Ncor= a 0 0 0 0 0 29.9584 13.2716 0 71.8475 90.7407 0 79.5455 90.7407 96.4567 68.2451 32.2449 0 c 0 0 0 0 0 19.6949 8.02469 28.3626 19.6481 2.22222 0.809717 2.27273 0 0 13.9276 30.6122 0 g 0 0 0 0 0 33.9806 75.6173 0 8.5044 6.66667 0 0.324675 3.33333 0 6.40669 11.4286 0 t 0 0 0 0 0 16.3662 3.08642 71.6374 0 0.37037 99.1903 17.8571 5.92593 3.54331 11.4206 25.7143 0

M05399_2.00_rc_shift5 (HOXA10,HOXC6_rc)
; positions_6nt_m3 versus M05399_2.00_rc (HOXA10,HOXC6_rc); m=76/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.677935; -----gGymATWAAac- ; cor=; Ncor= a 0 0 0 0 0 20.9528 14.7386 0.0462107 53.1972 85.4941 0 71.7175 95.2863 86.6239 41.8213 20.1572 0 c 0 0 0 0 0 22.2942 8.39869 55.037 39.4245 1.3834 0 1.2931 0 7.60913 21.3457 41.1003 0 g 0 0 0 0 0 38.3904 70.6863 0 6.02558 13.083 0 0.132626 0 0 19.9149 18.4004 0 t 0 0 0 0 0 18.3626 6.17647 44.9168 1.35268 0.0395257 100 26.8568 4.71366 5.76692 16.918 20.3421 0

M03140_2.00_rc_shift5 (HOXD11_rc)
; positions_6nt_m3 versus M03140_2.00_rc (HOXD11_rc); m=77/246; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.67789; -----rrymATAAAa-- ; cor=; Ncor= a 0 0 0 0 0 32.381 26.6376 7.37705 51.9802 77.2059 6.45161 68.6275 91.3043 88.9831 64.0244 0 0 c 0 0 0 0 0 5.71429 17.4672 38.5246 39.604 5.88235 5.64516 3.92157 0.869565 2.54237 13.4146 0 0 g 0 0 0 0 0 41.9048 45.8515 6.55738 5.44554 11.0294 3.22581 2.61438 5.21739 4.23729 12.8049 0 0 t 0 0 0 0 0 20 10.0437 47.541 2.9703 5.88235 84.6774 24.8366 2.6087 4.23729 9.7561 0 0

M08090_2.00_rc_shift5 (ZNF384_rc)
; positions_6nt_m3 versus M08090_2.00_rc (ZNF384_rc); m=78/246; ncol2=12; w=-1; offset=-1; strand=R; shift=5; score=0.677303; -----wwwmAAAAAAaa ; cor=; Ncor= a 0 0 0 0 0 31.0847 29.9543 31.2884 43.1275 99.7404 99.2048 98.8138 99.4053 99.241 99.9113 66.7762 62.1562 c 0 0 0 0 0 16.2488 23.0835 11.3561 25.2719 0.0230013 0.115007 0.069004 0.0427168 0.0854336 0.0197154 9.55542 13.022 g 0 0 0 0 0 18.5654 16.8666 15.3715 15.5128 0.0427168 0.0624322 0.0854336 0.0492886 0.0460027 0 9.0921 9.52256 t 0 0 0 0 0 34.1011 30.0956 41.984 16.0878 0.193868 0.61775 1.03177 0.502744 0.627608 0.069004 14.5763 15.2992

M05082_2.00_rc_shift5 (HOXC11_rc)
; positions_6nt_m3 versus M05082_2.00_rc (HOXC11_rc); m=79/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.676509; -----ggymrTwAAah- ; cor=; Ncor= a 0 0 0 0 0 23.2558 9.93915 1.34228 41.8103 61.3924 0 54.1899 88.4498 80.8333 45.6829 32.5342 0 c 0 0 0 0 0 19.7674 22.1095 53.3557 47.2701 8.86076 1.02041 8.37989 0 13.3333 19.1523 26.0274 0 g 0 0 0 0 0 33.1395 59.0264 1.00671 6.89655 27.6371 0 2.7933 0 1.66667 17.1115 16.0959 0 t 0 0 0 0 0 23.8372 8.92495 44.2953 4.02299 2.1097 98.9796 34.6369 11.5502 4.16667 18.0534 25.3425 0

M03274_2.00_rc_shift5 (M03274_2.00_rc)
; positions_6nt_m3 versus M03274_2.00_rc; m=80/246; ncol2=12; w=-1; offset=-1; strand=R; shift=5; score=0.676015; -----rgTCRTwAAawt ; cor=; Ncor= a 0 0 0 0 0 25.2841 23.5294 0.133511 3.8961 25.9605 1.93906 67.9167 95.5224 90.9561 59.8131 25.4261 19.7443 c 0 0 0 0 0 15.3409 20.2703 3.73832 91.4286 0.207684 0.138504 0.416667 0 3.48837 13.5089 23.2955 15.625 g 0 0 0 0 0 43.608 55.9618 2.13618 0 73.1049 0.415512 1.80556 0.27137 0.387597 9.94053 21.3068 15.9091 t 0 0 0 0 0 15.767 0.238474 93.992 4.67532 0.726895 97.5069 29.8611 4.20624 5.16796 16.7375 29.9716 48.7216

M09674_2.00_rc_shift5 (M09674_2.00_rc)
; positions_6nt_m3 versus M09674_2.00_rc; m=81/246; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.674728; -----rrymATAAAa-- ; cor=; Ncor= a 0 0 0 0 0 37.2373 31.0453 0.581395 33.4908 97.093 11.5587 77.201 86.4085 87.1199 48.4407 0 0 c 0 0 0 0 0 9.75194 24.799 44.3691 52.4448 0.968992 6.87239 1.74419 3.53309 2.32558 8.5486 0 0 g 0 0 0 0 0 44.034 40.1401 0.914729 0.968992 0.968992 0.968992 6.0972 0.968992 2.32558 20.6828 0 0 t 0 0 0 0 0 8.97674 4.0155 54.1348 13.0954 0.968992 80.5999 14.9577 9.08945 8.22898 22.328 0 0

M03139_2.00_shift6 (HOXD11)
; positions_6nt_m3 versus M03139_2.00 (HOXD11); m=82/246; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.674379; ------rTCGTAAAaw- ; cor=; Ncor= a 0 0 0 0 0 0 31.068 0 5.94796 22.8188 3.36134 75.7576 98.7124 95.4357 64.2458 38.0952 0 c 0 0 0 0 0 0 13.1068 0 85.5019 0 0 0 0 1.65975 8.10056 22.0779 0 g 0 0 0 0 0 0 55.8252 0 0 77.1812 0 0 0 0 7.82123 9.95671 0 t 0 0 0 0 0 0 0 100 8.55019 0 96.6387 24.2424 1.28755 2.90456 19.8324 29.8701 0

M09149_2.00_rc_shift5 (HOXB13_rc)
; positions_6nt_m3 versus M09149_2.00_rc (HOXB13_rc); m=83/246; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.673761; -----rsyhATAAAA-- ; cor=; Ncor= a 0 0 0 0 0 25.6 6.8 8.6 40.4 87.4 0 93.6 99.4 96.6 72.4 0 0 c 0 0 0 0 0 16.8 50 65.6 32.4 0.2 3.4 2.6 0.2 1.8 10 0 0 g 0 0 0 0 0 38.4 33 0.8 1 10 2.2 2.4 0.4 0.6 10.8 0 0 t 0 0 0 0 0 19.2 10.2 25 26.2 2.4 94.4 1.4 0 1 6.8 0 0

M05083_2.00_shift5 (HOXC12)
; positions_6nt_m3 versus M05083_2.00 (HOXC12); m=84/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.671585; -----gGYAATAAAay- ; cor=; Ncor= a 0 0 0 0 0 20.4905 12.6547 0 72.209 86.4865 0 82.7211 100 99.0228 67.6307 23.3553 0 c 0 0 0 0 0 15.5063 3.71389 26.2136 21.1401 0 0.490998 1.08844 0 0.977199 10.2336 31.25 0 g 0 0 0 0 0 48.1013 83.6314 0 5.70071 13.5135 0 0 0 0 8.45384 13.9803 0 t 0 0 0 0 0 15.9019 0 73.7864 0.950119 0 99.509 16.1905 0 0 13.6819 31.4145 0

M04977_2.00_rc_shift5 (HOXA13_rc)
; positions_6nt_m3 versus M04977_2.00_rc (HOXA13_rc); m=85/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.671176; -----vCCMATAAAAc- ; cor=; Ncor= a 0 0 0 0 0 30.8499 4.95673 0 70.7715 100 0 98.2492 99.8953 100 72.4374 15.68 0 c 0 0 0 0 0 36.8311 75.059 94.6429 29.2285 0 0 0 0 0 18.6029 60.64 0 g 0 0 0 0 0 30.4302 19.9843 0 0 0 0 1.75077 0.104712 0 2.73349 8.16 0 t 0 0 0 0 0 1.88877 0 5.35714 0 0 100 0 0 0 6.22627 15.52 0

M09432_2.00_shift7 (TBP,TBPL2)
; positions_6nt_m3 versus M09432_2.00 (TBP,TBPL2); m=86/246; ncol2=10; w=0; offset=1; strand=D; shift=7; score= 0.6681; -------mTATAAAars ; cor=; Ncor= a 0 0 0 0 0 0 0 28.1879 4.69799 81.2081 4.69799 85.906 71.1409 77.1812 59.7315 39.5973 7.38255 c 0 0 0 0 0 0 0 54.3624 8.72483 0 4.69799 6.04027 3.3557 2.01342 0.671141 3.3557 30.8725 g 0 0 0 0 0 0 0 15.4362 8.72483 4.69799 4.02685 4.02685 2.68456 19.4631 15.4362 49.6644 57.047 t 0 0 0 0 0 0 0 2.01342 77.8523 14.094 86.5772 4.02685 22.8188 1.34228 24.1611 7.38255 4.69799

M00198_2.00_shift7 (M00198_2.00)
; positions_6nt_m3 versus M00198_2.00; m=87/246; ncol2=10; w=0; offset=1; strand=D; shift=7; score=0.667273; -------aswTcAAAgr ; cor=; Ncor= a 0 0 0 0 0 0 0 48.7867 10.5157 63.7879 12.7896 11.7054 87.5401 81.883 72.8316 17.9802 26.7968 c 0 0 0 0 0 0 0 12.903 36.7034 4.46185 3.66428 66.6899 1.39389 4.64268 1.97023 17.8013 18.6955 g 0 0 0 0 0 0 0 19.4424 40.5635 2.21569 1.38907 13.5998 1.36629 8.54453 10.7849 56.2199 40.3779 t 0 0 0 0 0 0 0 18.8678 12.2175 29.5346 82.157 8.0049 9.69972 4.92977 14.4133 7.99863 14.1298

M03780_2.00_rc_shift4 (M03780_2.00_rc)
; positions_6nt_m3 versus M03780_2.00_rc; m=88/246; ncol2=12; w=-2; offset=-2; strand=R; shift=4; score=0.666745; ----rrGymATAAAac- ; cor=; Ncor= a 0 0 0 0 33.9388 32.221 9.80551 0.066211 49.8478 99.6049 0 99.7081 99.2998 98.8732 63.7915 22.8987 0 c 0 0 0 0 13.8922 8.8651 3.84263 67.8449 48.8544 0.144241 0 0 0.0125043 0.476235 16.1242 33.6429 0 g 0 0 0 0 41.3492 38.8195 83.1479 0 0.120834 0.250854 0 0 0 0.143182 6.4377 19.524 0 t 0 0 0 0 10.8197 20.0944 3.20394 32.0889 1.17695 0 100 0.29192 0.687736 0.507361 13.6467 23.9344 0

M04983_2.00_rc_shift5 (HOXA13_rc)
; positions_6nt_m3 versus M04983_2.00_rc (HOXA13_rc); m=89/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.663806; -----rcCAATAAAmy- ; cor=; Ncor= a 0 0 0 0 0 31.8367 18.2519 0 73.1343 92.1053 0 83.6177 100 98 62.6598 17.551 0 c 0 0 0 0 0 22.8571 62.982 75.6173 8.65672 7.89474 0 0 0 2 25.8312 40.8163 0 g 0 0 0 0 0 26.5306 17.4807 0 0 0 0 0 0 0 7.92839 10.6122 0 t 0 0 0 0 0 18.7755 1.28535 24.3827 18.209 0 100 16.3823 0 0 3.58056 31.0204 0

M09580_2.00_rc_shift5 (M09580_2.00_rc)
; positions_6nt_m3 versus M09580_2.00_rc; m=90/246; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.663677; -----ggyCATAAAw-- ; cor=; Ncor= a 0 0 0 0 0 23.2 24.5 2.2 20.9 72.5 0.1 98 94.7 95.4 44.6 0 0 c 0 0 0 0 0 13.4 14.8 53.9 75.6 2.1 0.1 0.1 0.1 4.2 12.9 0 0 g 0 0 0 0 0 47.4 60.6 2.1 2.8 24.5 0.2 1.2 0.4 0.3 12.1 0 0 t 0 0 0 0 0 16 0.1 41.8 0.7 0.9 99.6 0.7 4.8 0.1 30.4 0 0

M00200_2.00_shift7 (M00200_2.00)
; positions_6nt_m3 versus M00200_2.00; m=91/246; ncol2=10; w=0; offset=1; strand=D; shift=7; score=0.663548; -------aswTcAAAgr ; cor=; Ncor= a 0 0 0 0 0 0 0 48.7159 10.3241 63.9521 11.8677 10.7632 87.4585 80.9823 75.8453 18.2254 28.4337 c 0 0 0 0 0 0 0 13.4101 36.7628 4.17091 3.50372 67.7712 1.71801 5.89574 1.40312 17.5107 18.3124 g 0 0 0 0 0 0 0 19.221 41.0375 2.26627 1.21388 13.4118 1.32467 8.62126 9.96118 57.5592 40.3494 t 0 0 0 0 0 0 0 18.653 11.8756 29.6107 83.4147 8.05374 9.49879 4.50069 12.7904 6.70473 12.9045

M03248_2.00_rc_shift5 (M03248_2.00_rc)
; positions_6nt_m3 versus M03248_2.00_rc; m=92/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.655752; -----kCTmrTAAAah- ; cor=; Ncor= a 0 0 0 0 0 18.4104 8.16044 2.39062 27.3458 39.9463 0 78.7189 97.6763 95.9284 61.5679 28.0616 0 c 0 0 0 0 0 22.844 73.0883 12.9454 59.4312 0 0.0539957 0.276655 0.132031 0.363071 15.9288 35.0906 0 g 0 0 0 0 0 32.4953 16.9532 1.24041 1.12468 59.3557 0.0809935 0.595871 0 1.06328 7.04061 10.1108 0 t 0 0 0 0 0 26.2503 1.79806 83.4235 12.0983 0.697987 99.865 20.4086 2.19171 2.64523 15.4627 26.737 0

M05333_2.00_shift6 (HOXC5,HOXC6,HOXC9)
; positions_6nt_m3 versus M05333_2.00 (HOXC5,HOXC6,HOXC9); m=93/246; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.655515; ------GTCGTAAAay- ; cor=; Ncor= a 0 0 0 0 0 0 23.8436 0.840797 0.964506 15.7774 0.00973805 82.9469 99.6942 98.745 57.4193 21.9322 0 c 0 0 0 0 0 0 5.84449 5.31895 99.0355 0 0 0 0.00970921 0.331779 14.0473 31.194 0 g 0 0 0 0 0 0 70.3119 0 0 84.2226 0 0.0363519 0 0 10.1664 16.1424 0 t 0 0 0 0 0 0 0 93.8402 0 0 99.9903 17.0167 0.296131 0.92321 18.3671 30.7314 0

M03209_2.00_rc_shift6 (HOXD12_rc)
; positions_6nt_m3 versus M03209_2.00_rc (HOXD12_rc); m=94/246; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.653862; ------GyrATWAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 12.7279 3.31256 60.4093 87.2114 8.31376 68.6161 93.84 90.9047 58.1947 0 0 c 0 0 0 0 0 0 13.9933 34.2079 12.7598 3.73961 0.892438 1.6709 0.496771 4.5717 15.2187 0 0 g 0 0 0 0 0 0 70.3015 0.524762 26.8308 7.84857 2.0667 3.55975 0 1.49182 12.2304 0 0 t 0 0 0 0 0 0 2.9773 61.9547 0 1.20037 88.7271 26.1533 5.66319 3.03176 14.3561 0 0

M00248_2.00_rc_shift6 (WT1_rc)
; positions_6nt_m3 versus M00248_2.00_rc (WT1_rc); m=95/246; ncol2=13; w=0; offset=0; strand=R; shift=6; score=0.653748; ------tamATATAAtA ; cor=; Ncor= a 0 0 0 0 0 0 22.5797 40.0671 25.0544 85.1835 12.1696 89.532 20.5397 99.8774 72.5594 14.775 70.0218 c 0 0 0 0 0 0 22.5797 19.9776 44.8494 4.93882 2.52855 0.0408538 9.68195 0.0408538 2.46114 5.06322 9.99275 g 0 0 0 0 0 0 22.5797 19.9776 15.0481 4.93882 2.52855 10.3863 0.0408538 0.0408538 2.46114 14.9523 9.99275 t 0 0 0 0 0 0 32.2609 19.9776 15.0481 4.93882 82.7733 0.0408538 69.7375 0.0408538 22.5183 65.2095 9.99275

M05113_2.00_shift6 (HOXC6,HOXD10)
; positions_6nt_m3 versus M05113_2.00 (HOXC6,HOXD10); m=96/246; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.653371; ------rTCGTAAAay- ; cor=; Ncor= a 0 0 0 0 0 0 31.9603 0 0 20.9404 0 79.1491 100 96.8336 48.0885 18.4549 0 c 0 0 0 0 0 0 10.0221 1.60869 100 0 0 0 0 1.52385 19.6757 37.4412 0 g 0 0 0 0 0 0 58.0177 0 0 79.0596 0 0 0 0 10.2998 17.3718 0 t 0 0 0 0 0 0 0 98.3913 0 0 100 20.8509 0 1.64259 21.9361 26.7321 0

M03284_2.00_rc_shift6 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M03284_2.00_rc (HOXC5,HOXC6_rc); m=97/246; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.651435; ------stCrTWAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 24.5989 5.09804 12.0332 27.1318 3.44828 74.5614 90.9091 96.0452 55.8824 0 0 c 0 0 0 0 0 0 29.6791 20.3922 70.5394 2.71318 3.44828 0 2.13904 3.9548 16.4706 0 0 g 0 0 0 0 0 0 45.4545 7.84314 0 65.8915 9.35961 0 1.60428 0 12.3529 0 0 t 0 0 0 0 0 0 0.26738 66.6667 17.4274 4.26357 83.7438 25.4386 5.34759 0 15.2941 0 0

M09197_2.00_rc_shift5 (M09197_2.00_rc)
; positions_6nt_m3 versus M09197_2.00_rc; m=98/246; ncol2=12; w=-1; offset=-1; strand=R; shift=5; score=0.651339; -----rgcmATAAATCw ; cor=; Ncor= a 0 0 0 0 0 27.2 20.2 9.4 33 74 0.4 78.6 95.6 94.8 11.6 10.8 62 c 0 0 0 0 0 12 16 64.4 46.8 3.8 2 8.4 2.2 2 1.6 70.2 11.2 g 0 0 0 0 0 41.4 56.2 5.4 3.2 18.2 1.4 4.6 0.6 1 4.6 0.6 1.8 t 0 0 0 0 0 19.4 7.6 20.8 17 4 96.2 8.4 1.6 2.2 82.2 18.4 25

M00410_2.00_rc_shift5 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M00410_2.00_rc (HOXC5,HOXC6_rc); m=99/246; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.650603; -----rgymrTwAaa-- ; cor=; Ncor= a 0 0 0 0 0 27.57 24.4406 15.758 36.7506 59.6861 9.81883 52.2927 74.3375 65.6214 42.7731 0 0 c 0 0 0 0 0 18.6665 21.0362 36.8681 38.6348 8.92716 8.2838 5.2955 6.16332 10.7392 16.8763 0 0 g 0 0 0 0 0 33.3391 41.1098 9.00111 10.9589 26.8187 7.8798 7.00663 8.92285 9.43005 16.8763 0 0 t 0 0 0 0 0 20.4244 13.4133 38.3728 13.6557 4.56811 74.0176 35.4051 10.5763 14.2094 23.4744 0 0

M03581_2.00_shift8 (CPEB1)
; positions_6nt_m3 versus M03581_2.00 (CPEB1); m=100/246; ncol2=8; w=0; offset=2; strand=D; shift=8; score=0.649919; --------aATAAAAa- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 52.5709 82.7471 0.557007 98.1526 94.9235 93.8347 99.42 51.6227 0 c 0 0 0 0 0 0 0 0 5.13649 1.33908 0 0 0 0.104275 0 9.00192 0 g 0 0 0 0 0 0 0 0 24.9502 13.7299 0.433228 1.26116 0.599947 3.30422 0.58003 24.9787 0 t 0 0 0 0 0 0 0 0 17.3424 2.18391 99.0098 0.58627 4.47653 2.75678 0 14.3967 0

M01245_2.00_rc_shift5 (HOXC6_rc)
; positions_6nt_m3 versus M01245_2.00_rc (HOXC6_rc); m=101/246; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.647695; -----rrymATwAaa-- ; cor=; Ncor= a 0 0 0 0 0 29.3248 25.0798 14.0728 46.7929 76.0399 5.28815 55.7886 75.9063 67.0431 47.4445 0 0 c 0 0 0 0 0 17.089 20.5336 32.5978 32.9744 6.89819 6.65566 5.26757 4.80424 11.8857 16.4374 0 0 g 0 0 0 0 0 33.7316 38.5541 6.13644 8.80862 14.1719 2.81642 4.76629 5.00031 5.96158 15.6358 0 0 t 0 0 0 0 0 19.8546 15.8325 47.193 11.4242 2.89001 85.2398 34.1776 14.2891 15.1097 20.4823 0 0

M09575_2.00_rc_shift5 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M09575_2.00_rc (HOXC5,HOXC6_rc); m=102/246; ncol2=12; w=-1; offset=-1; strand=R; shift=5; score=0.645948; -----rgycATaAATCw ; cor=; Ncor= a 0 0 0 0 0 27.5 20.7 3.4 24.1 79.4 0.1 62.1 93.1 86.2 13.7 6.9 55.3 c 0 0 0 0 0 10.4 20.7 58.6 58.6 3.4 0.1 24.1 3.4 3.4 0.1 75.9 13.7 g 0 0 0 0 0 51.7 55.2 10.3 0.1 17.1 3.3 6.9 0.1 0.1 6.8 6.9 3.4 t 0 0 0 0 0 10.4 3.4 27.7 17.2 0.1 96.5 6.9 3.4 10.3 79.4 10.3 27.6

M08283_2.00_rc_shift6 (MYNN_rc)
; positions_6nt_m3 versus M08283_2.00_rc (MYNN_rc); m=103/246; ncol2=12; w=0; offset=0; strand=R; shift=6; score=0.645815; ------AaAwTAArAGy ; cor=; Ncor= a 0 0 0 0 0 0 72.0912 67.3742 73.6635 65.8019 1.02201 99.4497 89.0723 63.6006 98.5063 0.0786164 2.27987 c 0 0 0 0 0 0 6.99686 10.1415 8.56918 1.33648 1.96541 0.0786164 1.65094 1.02201 0.0786164 0.707547 34.6698 g 0 0 0 0 0 0 12.3428 12.0283 13.2862 6.68239 3.22327 0.0786164 7.94025 30.8962 1.33648 98.1918 4.16667 t 0 0 0 0 0 0 8.56918 10.456 4.48113 26.1792 93.7893 0.393082 1.33648 4.48113 0.0786164 1.02201 58.8836

M09170_2.00_shift7 (HOXC6)
; positions_6nt_m3 versus M09170_2.00 (HOXC6); m=104/246; ncol2=12; w=0; offset=1; strand=D; shift=7; score=0.644309; -------wCATAAAyyr ; cor=; Ncor= a 0 0 0 0 0 0 0 30.7692 9.89011 100 0 90.1099 100 91.2088 9.89011 10.989 60.4396 c 0 0 0 0 0 0 0 9.89011 80.2198 0 0 0 0 0 30.7692 39.5604 9.89011 g 0 0 0 0 0 0 0 17.5824 0 0 0 0 0 0 8.79121 9.89011 29.6703 t 0 0 0 0 0 0 0 41.7582 9.89011 0 100 9.89011 0 8.79121 50.5495 39.5604 0

M09130_2.00_shift7 (HOXA9,HOXC5,HOXC6)
; positions_6nt_m3 versus M09130_2.00 (HOXA9,HOXC5,HOXC6); m=105/246; ncol2=12; w=0; offset=1; strand=D; shift=7; score=0.644309; -------wCATAAAyyr ; cor=; Ncor= a 0 0 0 0 0 0 0 30.7692 9.89011 100 0 90.1099 100 91.2088 9.89011 10.989 60.4396 c 0 0 0 0 0 0 0 9.89011 80.2198 0 0 0 0 0 30.7692 39.5604 9.89011 g 0 0 0 0 0 0 0 17.5824 0 0 0 0 0 0 8.79121 9.89011 29.6703 t 0 0 0 0 0 0 0 41.7582 9.89011 0 100 9.89011 0 8.79121 50.5495 39.5604 0

M03782_2.00_rc_shift4 (M03782_2.00_rc)
; positions_6nt_m3 versus M03782_2.00_rc; m=106/246; ncol2=12; w=-2; offset=-2; strand=R; shift=4; score=0.643589; ----vgGYMATAAAms- ; cor=; Ncor= a 0 0 0 0 31.2432 23.4868 10.1975 0 29.236 93.9394 0 96.5023 95.4341 94.9742 32.5118 15.1197 0 c 0 0 0 0 25.8065 20.5147 12.8137 71.8677 69.4288 1.02145 0 0 0 2.37522 37.2236 41.0805 0 g 0 0 0 0 33.5629 32.2581 73.6519 0 0 5.03916 0 0.0349773 0 0.550775 10.9822 25.6345 0 t 0 0 0 0 9.38746 23.7405 3.33689 28.1323 1.33517 0 100 3.46275 4.56589 2.09983 19.2823 18.1653 0

M00509_2.00_rc_shift6 (HOXC6_rc)
; positions_6nt_m3 versus M00509_2.00_rc (HOXC6_rc); m=107/246; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.642091; ------gymrtwaa--- ; cor=; Ncor= a 0 0 0 0 0 0 24.7161 19.3063 31.7611 44.8338 17.2335 41.2167 51.0367 45.4306 0 0 0 c 0 0 0 0 0 0 24.2267 30.2783 31.7611 14.4828 17.9368 14.4233 13.0991 17.222 0 0 0 g 0 0 0 0 0 0 32.3772 16.9528 17.783 25.6095 16.5577 15.3152 16.3225 14.1002 0 0 0 t 0 0 0 0 0 0 18.68 33.4627 18.6948 15.0739 48.272 29.0449 19.5416 23.2472 0 0 0

M01660_2.00_shift7 (ARID3B,ARID3C)
; positions_6nt_m3 versus M01660_2.00 (ARID3B,ARID3C); m=108/246; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.638918; -------wwATyAAaw- ; cor=; Ncor= a 0 0 0 0 0 0 0 26.9597 34.5989 98.0846 0.979404 24.5593 78.6967 73.3314 55.7268 36.5112 0 c 0 0 0 0 0 0 0 19.9722 9.24259 0.0894416 1.32206 30.6027 6.02309 7.13484 7.69416 21.0651 0 g 0 0 0 0 0 0 0 22.9735 23.8987 1.74339 1.23268 3.93964 8.21204 7.65217 14.5918 13.703 0 t 0 0 0 0 0 0 0 30.0945 32.2598 0.082565 96.4659 40.8983 7.06817 11.8816 21.9872 28.7207 0

M02081_2.00_rc_shift7 (M02081_2.00_rc)
; positions_6nt_m3 versus M02081_2.00_rc; m=109/246; ncol2=8; w=0; offset=1; strand=R; shift=7; score=0.637873; -------ymATAAAw-- ; cor=; Ncor= a 0 0 0 0 0 0 0 8.41741 56.0196 75.7832 1.91671 87.2453 93.6131 93.0367 55.7574 0 0 c 0 0 0 0 0 0 0 29.9047 25.5318 1.27993 1.27993 0.0063678 0.0063678 0.701194 13.466 0 0 g 0 0 0 0 0 0 0 0.943572 0.00709019 9.55807 0.0063678 0.643148 1.27993 1.39545 4.81546 0 0 t 0 0 0 0 0 0 0 60.7343 18.4416 13.3788 96.797 12.1052 5.10061 4.8667 25.9612 0 0

M03772_2.00_shift5 (HOXC5,HOXC6)
; positions_6nt_m3 versus M03772_2.00 (HOXC5,HOXC6); m=110/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.636946; -----rGTCrTAAAah- ; cor=; Ncor= a 0 0 0 0 0 36.0139 22.577 1.15845 1.52626 32.6461 0.115851 79.3153 99.1196 96.6328 58.7626 25.4031 0 c 0 0 0 0 0 7.80268 7.78417 2.96485 98.4065 0 0.14311 0.184137 0.155763 1.34689 11.9846 30.0355 0 g 0 0 0 0 0 39.3618 69.6389 0.0850841 0.0672359 67.3539 0 0 0.0744955 0.323518 7.1787 10.5083 0 t 0 0 0 0 0 16.8215 0 95.7916 0 0 99.741 20.5006 0.650142 1.69682 22.0741 34.053 0

M02646_2.00_shift8 (M02646_2.00)
; positions_6nt_m3 versus M02646_2.00; m=111/246; ncol2=9; w=0; offset=2; strand=D; shift=8; score=0.636008; --------sATcAAAgg ; cor=; Ncor= a 0 0 0 0 0 0 0 0 5.6 78.2 9.9 11.2 92.9 91.5 83.7 15.9 23.8 c 0 0 0 0 0 0 0 0 48.1 1.7 2.2 67.5 1 2.9 0.3 14.3 22.8 g 0 0 0 0 0 0 0 0 36.6 0 0 16.5 0.4 3.2 10.3 66.2 33.7 t 0 0 0 0 0 0 0 0 9.7 19.4 87.6 4.8 5.8 2.4 5.6 3.6 19.7

M09140_2.00_shift7 (CDX1)
; positions_6nt_m3 versus M09140_2.00 (CDX1); m=112/246; ncol2=8; w=0; offset=1; strand=D; shift=7; score=0.635974; -------mCaTAAAt-- ; cor=; Ncor= a 0 0 0 0 0 0 0 36.1111 0 62.724 3.22581 75.2688 93.5484 87.0968 24.1935 0 0 c 0 0 0 0 0 0 0 33.9606 79.3907 3.22581 16.129 12.9032 3.22581 9.67742 4.83871 0 0 g 0 0 0 0 0 0 0 9.94624 0 9.319 0 5.37634 0 0 24.3728 0 0 t 0 0 0 0 0 0 0 19.9821 20.6093 24.7312 80.6452 6.45161 3.22581 3.22581 46.595 0 0

M09186_2.00_shift7 (M09186_2.00)
; positions_6nt_m3 versus M09186_2.00; m=113/246; ncol2=8; w=0; offset=1; strand=D; shift=7; score=0.635974; -------mCaTAAAt-- ; cor=; Ncor= a 0 0 0 0 0 0 0 36.1111 0 62.724 3.22581 75.2688 93.5484 87.0968 24.1935 0 0 c 0 0 0 0 0 0 0 33.9606 79.3907 3.22581 16.129 12.9032 3.22581 9.67742 4.83871 0 0 g 0 0 0 0 0 0 0 9.94624 0 9.319 0 5.37634 0 0 24.3728 0 0 t 0 0 0 0 0 0 0 19.9821 20.6093 24.7312 80.6452 6.45161 3.22581 3.22581 46.595 0 0

M00389_2.00_rc_shift5 (M00389_2.00_rc)
; positions_6nt_m3 versus M00389_2.00_rc; m=114/246; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.63367; -----scyhrTwAAa-- ; cor=; Ncor= a 0 0 0 0 0 22.897 19.1994 13.2557 32.4192 55.2686 4.6339 62.2496 82.2278 75.8821 40.2869 0 0 c 0 0 0 0 0 25.3051 41.8829 35.6741 36.9199 2.36838 5.89084 3.97948 1.08274 8.66403 20.0059 0 0 g 0 0 0 0 0 27.9665 24.4072 7.05986 5.41272 35.595 0.0504586 6.627 4.39072 4.21724 15.2721 0 0 t 0 0 0 0 0 23.8314 14.5106 44.0104 25.2481 6.768 89.4248 27.1439 12.2987 11.2366 24.4352 0 0

M00300_2.00_rc_shift7 (HOXD13_rc)
; positions_6nt_m3 versus M00300_2.00_rc (HOXD13_rc); m=115/246; ncol2=8; w=0; offset=1; strand=R; shift=7; score=0.631513; -------yaATAAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 0 5.66767 56.925 72.5366 1.95404 85.0493 94.7871 91.6482 59.3923 0 0 c 0 0 0 0 0 0 0 27.3576 24.8176 0.659958 0.655674 0.00649182 0.00649182 1.39545 11.8864 0 0 g 0 0 0 0 0 0 0 0.0094304 0.00729714 16.3421 0.00649182 0.655674 0.00649182 1.39545 7.92755 0 0 t 0 0 0 0 0 0 0 66.9653 18.2501 10.4613 97.3838 14.2885 5.19995 5.56096 20.7937 0 0

M05394_2.00_shift5 (HOXA10,HOXC6)
; positions_6nt_m3 versus M05394_2.00 (HOXA10,HOXC6); m=116/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.631371; -----rGTCGTAAAAh- ; cor=; Ncor= a 0 0 0 0 0 25.52 22.7868 0 0 23.0603 0 90.2244 99.9819 99.4961 71.3539 27.5391 0 c 0 0 0 0 0 12.3078 5.91914 0.387387 100 0 0.00904323 0 0 0 9.95741 31.9436 0 g 0 0 0 0 0 51.0219 71.2941 0 0 76.9397 0 0 0.0180848 0 4.86577 11.4226 0 t 0 0 0 0 0 11.1503 0 99.6126 0 0 99.991 9.7756 0 0.503914 13.8229 29.0947 0

M03131_2.00_rc_shift5 (HOXC11_rc)
; positions_6nt_m3 versus M03131_2.00_rc (HOXC11_rc); m=117/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.630952; -----rrTCrTwAAaw- ; cor=; Ncor= a 0 0 0 0 0 31.3037 27.8155 2.07881 7.85576 32.6155 0.233055 64.9797 94.1739 91.1419 59.2233 32.3575 0 c 0 0 0 0 0 12.3927 12.3433 4.39262 82.4855 0.40218 0.252476 0.656751 0.147032 2.68588 11.9394 20.9602 0 g 0 0 0 0 0 36.2412 58.944 0.903832 0.579524 66.4764 0 0.367008 0.496232 1.54749 8.46047 13.1538 0 t 0 0 0 0 0 20.0625 0.897274 92.6247 9.0792 0.505968 99.5145 33.9965 5.18287 4.62469 20.3768 33.5285 0

M05116_2.00_shift5 (HOXC6,HOXD10)
; positions_6nt_m3 versus M05116_2.00 (HOXC6,HOXD10); m=118/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.629469; -----rGTCGTAAAAh- ; cor=; Ncor= a 0 0 0 0 0 27.0829 17.8925 0 0.684199 21.507 0 92.2909 100 99.0828 76.1725 28.3315 0 c 0 0 0 0 0 11.3671 6.6894 0.853424 99.3158 0.0168947 0 0 0 0.767918 7.59265 31.2164 0 g 0 0 0 0 0 51.6685 75.4181 0.0426712 0 78.4761 3.14846 0.35764 0 0 4.29649 10.3983 0 t 0 0 0 0 0 9.88159 0 99.1039 0 0 96.8515 7.35148 0 0.149317 11.9383 30.0538 0

M00554_2.00_rc_shift5 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M00554_2.00_rc (HOXC5,HOXC6_rc); m=119/246; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.626466; -----rgymrTwAaw-- ; cor=; Ncor= a 0 0 0 0 0 27.2318 23.6474 15.7584 34.0063 58.6239 5.69668 51.0046 76.869 64.1576 37.1455 0 0 c 0 0 0 0 0 20.1738 23.1791 35.4234 40.7129 9.69046 6.04895 7.04217 5.65252 13.6173 19.9822 0 0 g 0 0 0 0 0 33.5953 40.5791 8.47713 8.72809 26.8735 0.0298935 3.7883 5.27038 7.32536 17.7226 0 0 t 0 0 0 0 0 18.999 12.5944 40.3411 16.5526 4.81214 88.2245 38.1649 12.2081 14.8997 25.1496 0 0

M03775_2.00_rc_shift2 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M03775_2.00_rc (HOXC5,HOXC6_rc); m=120/246; ncol2=14; w=-4; offset=-4; strand=R; shift=2; score=0.626437; --aAAAsmCATwAAAh- ; cor=; Ncor= a 0 0 62.0758 78.5266 81.8627 81.5961 5.42477 46.9101 0.19685 99.0119 2.11538 62.7639 96.9052 98.2353 75.6798 31 0 c 0 0 9.18164 7.83699 9.47712 2.11726 51.2794 31.0861 98.622 0.197628 1.53846 2.4952 0.193424 0.588235 11.7825 31.6 0 g 0 0 16.3673 6.42633 1.14379 10.5863 32.7533 11.8914 0 0 0 1.34357 0.773694 1.17647 2.87009 8.8 0 t 0 0 12.3752 7.21003 7.51634 5.70033 10.5425 10.1124 1.1811 0.790514 96.3462 33.3973 2.12766 0 9.66767 28.6 0

M01658_2.00_shift7 (ARID3B,ARID3C)
; positions_6nt_m3 versus M01658_2.00 (ARID3B,ARID3C); m=121/246; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.626283; -------twAThAaaw- ; cor=; Ncor= a 0 0 0 0 0 0 0 24.9746 36.7305 99.9306 1.14163 26.0879 72.5817 63.6466 48.9639 31.0029 0 c 0 0 0 0 0 0 0 22.825 11.5145 0.0100969 1.06445 31.2329 5.6673 10.2098 10.709 22.5127 0 g 0 0 0 0 0 0 0 22.5979 22.2782 0.0207435 1.01253 4.91097 10.2237 12.2233 17.6561 18.4318 0 t 0 0 0 0 0 0 0 29.6025 29.4769 0.0385606 96.7814 37.7683 11.5272 13.9203 22.6709 28.0526 0

M00367_2.00_rc_shift5 (NR1H2,NR1H4_rc)
; positions_6nt_m3 versus M00367_2.00_rc (NR1H2,NR1H4_rc); m=122/246; ncol2=13; w=-1; offset=-1; strand=R; shift=5; score=0.625311; -----tkwtATAAtAws ; cor=; Ncor= a 0 0 0 0 0 22.5715 20.2323 39.2195 24.5374 73.073 0.0270709 99.9188 80.4586 21.9158 76.0942 25.5241 19.8486 c 0 0 0 0 0 22.5715 20.2323 10.4805 16.4668 2.43408 9.94694 0.0270709 10.1305 2.4556 14.3162 14.5466 30.8261 g 0 0 0 0 0 22.5715 29.9464 20.1946 5.17847 12.5375 0.0270709 0.0270709 0.0270709 13.4331 4.7948 14.5466 29.4767 t 0 0 0 0 0 32.2856 29.5891 30.1053 53.8173 11.9555 89.9989 0.0270709 9.38387 62.1955 4.7948 45.3828 19.8486

M00390_2.00_rc_shift5 (M00390_2.00_rc)
; positions_6nt_m3 versus M00390_2.00_rc; m=123/246; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.624247; -----rsymrTwAaa-- ; cor=; Ncor= a 0 0 0 0 0 26.117 24.7986 15.076 29.9041 49.3099 12.0043 52.691 76.2537 65.5904 38.9216 0 0 c 0 0 0 0 0 20.1375 25.5538 28.3068 47.3703 7.6762 7.06578 5.0251 3.36715 9.71266 20.1167 0 0 g 0 0 0 0 0 33.2012 38.5049 8.52585 8.31446 38.0205 2.25977 4.78002 7.12825 9.61601 16.6357 0 0 t 0 0 0 0 0 20.5443 11.1427 48.0914 14.4111 4.99344 78.6702 37.5039 13.2509 15.0809 24.3261 0 0

M02092_2.00_rc_shift5 (HOXB13_rc)
; positions_6nt_m3 versus M02092_2.00_rc (HOXB13_rc); m=124/246; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.623861; -----scyhrTwAAa-- ; cor=; Ncor= a 0 0 0 0 0 24.2336 19.7551 15.1577 32.7507 57.3867 5.11546 55.7684 72.7356 69.2102 37.1868 0 0 c 0 0 0 0 0 26.5157 40.9935 39.1933 33.4123 2.38646 10.7217 6.89784 6.15233 11.2138 21.6706 0 0 g 0 0 0 0 0 27.3233 24.6164 7.99252 6.48132 34.1176 0.0408548 8.50971 8.47254 7.66871 16.7091 0 0 t 0 0 0 0 0 21.9274 14.635 37.6565 27.3557 6.1093 84.122 28.824 12.6395 11.9073 24.4335 0 0

M00493_2.00_rc_shift6 (M00493_2.00_rc)
; positions_6nt_m3 versus M00493_2.00_rc; m=125/246; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.623286; ------vymrtwaa--- ; cor=; Ncor= a 0 0 0 0 0 0 25.9281 18.0638 29.6012 38.4068 19.0588 44.3489 58.0384 50.5587 0 0 0 c 0 0 0 0 0 0 25.6701 27.4924 39.1662 13.7115 18.3115 13.7644 13.2117 15.5356 0 0 0 g 0 0 0 0 0 0 33.2923 14.6422 13.9826 32.7281 13.8395 12.4546 11.9545 11.8596 0 0 0 t 0 0 0 0 0 0 15.1095 39.8017 17.25 15.1536 48.7902 29.4321 16.7954 22.0461 0 0 0

M00293_2.00_rc_shift5 (HOXD13_rc)
; positions_6nt_m3 versus M00293_2.00_rc (HOXD13_rc); m=126/246; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.622828; -----gsyhrTwAaw-- ; cor=; Ncor= a 0 0 0 0 0 23.8214 22.3966 15.1078 31.6447 54.485 3.93707 55.2895 74.4533 65.3982 35.8579 0 0 c 0 0 0 0 0 24.7936 35.8344 36.061 32.9361 4.51735 9.30393 6.31282 3.12731 11.9472 21.3183 0 0 g 0 0 0 0 0 26.5913 25.5058 10.5404 8.45341 34.0533 1.09465 10.9417 6.29762 7.61786 17.8065 0 0 t 0 0 0 0 0 24.7936 16.2632 38.2909 26.9658 6.94433 85.6643 27.456 16.1218 15.0367 25.0172 0 0

M05122_2.00_rc_shift5 (HOXD13_rc)
; positions_6nt_m3 versus M05122_2.00_rc (HOXD13_rc); m=127/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.622234; -----ssCMATAAAmC- ; cor=; Ncor= a 0 0 0 0 0 12.2283 8.53018 0 72.4409 98.6595 1.60428 100 96.8421 83.4467 58.4127 16.3043 0 c 0 0 0 0 0 49.4565 48.294 100 27.5591 0 0 0 0 16.5533 39.5238 82.337 0 g 0 0 0 0 0 35.0543 43.1759 0 0 1.34048 0 0 3.15789 0 2.06349 0.815217 0 t 0 0 0 0 0 3.26087 0 0 0 0 98.3957 0 0 0 0 0.543478 0

M03783_2.00_rc_shift4 (M03783_2.00_rc)
; positions_6nt_m3 versus M03783_2.00_rc; m=128/246; ncol2=12; w=-2; offset=-2; strand=R; shift=4; score=0.621544; ----rgGyCrTAAAys- ; cor=; Ncor= a 0 0 0 0 26.0778 19.0942 24.9819 0 20.6491 64.782 0 99.0625 96.0121 95.3383 21.7026 15.8697 0 c 0 0 0 0 17.8759 22.6613 5.51124 49.9344 77.1602 0.0340599 0 0 0.100959 2.20551 34.6295 31.5817 0 g 0 0 0 0 34.9106 33.2576 68.963 0.157439 1.29817 35.1839 0.105042 0 0 0.601504 15.7646 30.2154 0 t 0 0 0 0 21.1356 24.9869 0.543872 49.9082 0.892495 0 99.895 0.9375 3.88693 1.85464 27.9033 22.3332 0

M00505_2.00_rc_shift5 (M00505_2.00_rc)
; positions_6nt_m3 versus M00505_2.00_rc; m=129/246; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.620395; -----ssyhrTwAaa-- ; cor=; Ncor= a 0 0 0 0 0 23.771 20.9917 14.7959 31.594 51.668 5.55834 56.5888 78.2973 66.6261 37.3403 0 0 c 0 0 0 0 0 25.4946 38.6337 37.1273 34.2254 3.6871 10.0272 5.67353 1.52274 11.8118 20.9068 0 0 g 0 0 0 0 0 27.8955 25.1316 9.4343 7.79099 37.1454 0.0370792 9.35407 5.58739 7.83888 17.4628 0 0 t 0 0 0 0 0 22.8389 15.2431 38.6425 26.3896 7.49952 84.3774 28.3836 14.5926 13.7233 24.2902 0 0

M09158_2.00_rc_shift3 (EVX2,HOXC5,NANOGP8,NKX1-1,NKX1-2,TLX1_rc)
; positions_6nt_m3 versus M09158_2.00_rc (EVX2,HOXC5,NANOGP8,NKX1-1,NKX1-2,TLX1_rc); m=130/246; ncol2=13; w=-3; offset=-3; strand=R; shift=3; score=0.617566; ---rrrGymATAAAam- ; cor=; Ncor= a 0 0 0 41.8 36.8 38.2 11.2 0.8 45.2 93.8 0.2 92.2 97.8 96.4 49.4 29.8 0 c 0 0 0 19 19.6 4.8 10.6 60.6 49.6 0 0.4 2.8 0 1.4 20.8 36.2 0 g 0 0 0 25 30.8 41.4 73.6 0 0.6 5.8 1 2.2 0.8 1 18.2 17.6 0 t 0 0 0 14.2 12.8 15.6 4.6 38.6 4.6 0.4 98.4 2.8 1.4 1.2 11.6 16.4 0

M00475_2.00_rc_shift6 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M00475_2.00_rc (HOXC5,HOXC6_rc); m=131/246; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.617407; ------gymatwaa--- ; cor=; Ncor= a 0 0 0 0 0 0 23.7811 18.1949 32.6787 50.4181 15.9948 41.1281 52.2166 45.5358 0 0 0 c 0 0 0 0 0 0 23.0782 35.5571 34.6994 13.2018 13.227 14.5369 15.4159 18.5135 0 0 0 g 0 0 0 0 0 0 37.6709 13.7514 16.0663 24.7878 12.0886 10.6621 14.8114 16.0948 0 0 0 t 0 0 0 0 0 0 15.4698 32.4967 16.5556 11.5924 58.6896 33.6729 17.5561 19.8559 0 0 0

M08131_2.00_rc_shift4 (CDX2_rc)
; positions_6nt_m3 versus M08131_2.00_rc (CDX2_rc); m=132/246; ncol2=11; w=-2; offset=-2; strand=R; shift=4; score=0.61659; ----rdGymATAAAa-- ; cor=; Ncor= a 0 0 0 0 38.3845 41.6406 19.2862 0 43.6443 100 0 100 100 100 63.4314 0 0 c 0 0 0 0 19.975 0.500939 8.51597 65.623 52.0977 0 0 0 0 0 9.39261 0 0 g 0 0 0 0 30.0564 31.4339 72.1979 0 0 0 0 0 0 0 19.5992 0 0 t 0 0 0 0 11.5842 26.4245 0 34.377 4.25798 0 100 0 0 0 7.57671 0 0

M00115_2.00_shift7 (ARID3B,ARID3C)
; positions_6nt_m3 versus M00115_2.00 (ARID3B,ARID3C); m=133/246; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.615252; -------ywATyAaaw- ; cor=; Ncor= a 0 0 0 0 0 0 0 24.6578 37.8326 93.2211 10.9459 19.8441 70.8755 60.7308 51.9306 34.7377 0 c 0 0 0 0 0 0 0 26.7115 8.9636 2.00366 5.71426 33.3784 5.64588 10.0387 10.8039 20.2433 0 g 0 0 0 0 0 0 0 23.2219 24.6105 2.44727 9.42122 11.3351 13.8866 14.1039 18.7259 18.501 0 t 0 0 0 0 0 0 0 25.4088 28.5933 2.32792 73.9186 35.4424 9.59196 15.1265 18.5396 26.518 0

M00193_2.00_rc_shift6 (M00193_2.00_rc)
; positions_6nt_m3 versus M00193_2.00_rc; m=134/246; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.613492; ------wasawcaaa-- ; cor=; Ncor= a 0 0 0 0 0 0 27.8784 33.5052 16.9181 39.7157 26.6105 16.3761 53.4388 48.6755 51.2805 0 0 c 0 0 0 0 0 0 24.2363 21.7954 32.4073 15.9866 16.6316 38.6994 10.8975 16.2027 10.5625 0 0 g 0 0 0 0 0 0 22.1503 22.0145 30.2164 19.7223 20.1118 23.4724 19.078 15.7238 20.0316 0 0 t 0 0 0 0 0 0 25.735 22.6849 20.4582 24.5754 36.6461 21.4521 16.5856 19.3981 18.1253 0 0

M06224_2.00_shift6 (M06224_2.00)
; positions_6nt_m3 versus M06224_2.00; m=135/246; ncol2=9; w=0; offset=0; strand=D; shift=6; score=0.613387; ------RtCrwAAar-- ; cor=; Ncor= a 0 0 0 0 0 0 69.2308 7.69231 0 46.1538 30.7692 92.3077 100 61.5385 38.4615 0 0 c 0 0 0 0 0 0 0 15.3846 69.2308 23.0769 7.69231 0 0 23.0769 23.0769 0 0 g 0 0 0 0 0 0 30.7692 23.0769 7.69231 30.7692 15.3846 0 0 0 38.4615 0 0 t 0 0 0 0 0 0 0 53.8462 23.0769 0 46.1538 7.69231 0 15.3846 0 0 0

M03207_2.00_shift5 (HOXD12)
; positions_6nt_m3 versus M03207_2.00 (HOXD12); m=136/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.61253; -----rgTCGTAAAAm- ; cor=; Ncor= a 0 0 0 0 0 46.0132 21.546 0.0701754 0.218182 13.1345 0.0725689 85.9208 99.781 96.4714 71.3093 39.3275 0 c 0 0 0 0 0 11.3387 17.1924 3.4386 99.4182 0.126904 0.725689 0 0 0 9.6505 35.2339 0 g 0 0 0 0 0 38.4053 60.7286 0.561404 0.363636 86.7386 0 0.125707 0.218978 0.42343 2.50391 5.62865 0 t 0 0 0 0 0 4.24287 0.533096 95.9298 0 0 99.2017 13.9535 0 3.10515 16.5363 19.8099 0

M09161_2.00_rc_shift5 (HOXC5,HOXC6,HOXC9_rc)
; positions_6nt_m3 versus M09161_2.00_rc (HOXC5,HOXC6,HOXC9_rc); m=137/246; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.610441; -----dGCmATaAAw-- ; cor=; Ncor= a 0 0 0 0 0 29.6 7 2.8 49 94.6 0.4 61.8 96.4 88.6 51 0 0 c 0 0 0 0 0 1.6 13.4 80.2 45.4 1.8 1.2 3.2 1.6 4.6 7.4 0 0 g 0 0 0 0 0 40 77.4 1.4 0.4 2.4 2.4 12.6 1.2 2.8 15.6 0 0 t 0 0 0 0 0 28.8 2.2 15.6 5.2 1.2 96 22.4 0.8 4 26 0 0

M07551_2.00_rc_shift5 (CTCF_rc)
; positions_6nt_m3 versus M07551_2.00_rc (CTCF_rc); m=138/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.609733; -----AAAAAyAAAAR- ; cor=; Ncor= a 0 0 0 0 0 100 100 100 73.6842 94.7368 15.7895 100 78.9474 100 84.2105 68.4211 0 c 0 0 0 0 0 0 0 0 10.5263 0 26.3158 0 15.7895 0 10.5263 0 0 g 0 0 0 0 0 0 0 0 10.5263 5.2632 5.2632 0 0 0 0 31.5789 0 t 0 0 0 0 0 0 0 0 5.2632 0 52.6316 0 5.2632 0 5.2632 0 0

M00508_2.00_rc_shift5 (M00508_2.00_rc)
; positions_6nt_m3 versus M00508_2.00_rc; m=139/246; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.607794; -----rrymrTwAaw-- ; cor=; Ncor= a 0 0 0 0 0 25.6067 26.3052 13.8894 32.0918 43.6555 11.8057 51.3416 70.4721 58.598 35.7531 0 0 c 0 0 0 0 0 22.0399 23.5651 31.5358 37.2853 10.5522 11.0075 12.5347 6.32947 13.7454 21.0444 0 0 g 0 0 0 0 0 30.9649 37.704 10.7094 15.3114 38.719 3.59154 7.0887 6.99515 10.1828 17.7545 0 0 t 0 0 0 0 0 21.3885 12.4257 43.8653 15.3114 7.07332 73.5952 29.035 16.2033 17.4738 25.448 0 0

M03133_2.00_shift5 (HOXC11)
; positions_6nt_m3 versus M03133_2.00 (HOXC11); m=140/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.606582; -----rrTCGTWAAah- ; cor=; Ncor= a 0 0 0 0 0 27.7755 26.1372 1.4838 2.16978 18.7851 0.485437 71.6178 98.3213 96.7742 62.3416 28.7398 0 c 0 0 0 0 0 10.5734 12.0382 1.60094 93.6429 0 0 0.240867 0 1.69158 10.9225 25.5285 0 g 0 0 0 0 0 45.1403 61.8246 0.859039 0.456795 81.2149 0 1.00361 0 0.668765 7.07045 15.6098 0 t 0 0 0 0 0 16.5108 0 96.0562 3.73049 0 99.5146 27.1377 1.67866 0.86546 19.6655 30.122 0

M05755_2.00_shift7 (TCF7)
; positions_6nt_m3 versus M05755_2.00 (TCF7); m=141/246; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.605698; -------asATCAAag- ; cor=; Ncor= a 0 0 0 0 0 0 0 53.927 0 86.4594 0 0 100 87.0557 64.1016 8.004 0 c 0 0 0 0 0 0 0 11.0089 65.5836 0 0 80.5596 0 8.11671 6.5625 21.3607 0 g 0 0 0 0 0 0 0 18.9616 33.1528 1.73867 0 17.9676 0 0.371353 11.5625 60.6803 0 t 0 0 0 0 0 0 0 16.1025 1.26354 11.8019 100 1.47275 0 4.45623 17.7734 9.95498 0

M05340_2.00_shift5 (HOXC10,HOXC6)
; positions_6nt_m3 versus M05340_2.00 (HOXC10,HOXC6); m=142/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.605398; -----grTCGTAAAay- ; cor=; Ncor= a 0 0 0 0 0 19.4615 25.4455 0 0 15.6747 0 89.7436 100 99.7625 61.517 21.0362 0 c 0 0 0 0 0 22.602 8.07191 0 100 0 0 0 0 0 12.952 35.854 0 g 0 0 0 0 0 44.7619 66.4825 0 0 84.3253 0 0 0 0 6.28073 14.4436 0 t 0 0 0 0 0 13.1746 0 100 0 0 100 10.2564 0 0.23753 19.2502 28.6662 0

M03142_2.00_shift5 (HOXD13)
; positions_6nt_m3 versus M03142_2.00 (HOXD13); m=143/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.604638; -----gCTCGTAAAAh- ; cor=; Ncor= a 0 0 0 0 0 5.7842 2.90873 0.655738 2.32108 17.8995 0.551876 90.1705 99.337 99.778 75.1672 29.4772 0 c 0 0 0 0 0 21.5795 90.1705 0.218579 86.9439 0 0.220751 0.100301 0 0 12.0401 32.4805 0 g 0 0 0 0 0 54.8387 6.92076 0.874317 0.0967118 82.1005 0 0.802407 0 0.221976 3.76254 6.89655 0 t 0 0 0 0 0 17.7976 0 98.2514 10.6383 0 99.2274 8.92678 0.662983 0 9.0301 31.1457 0

M03176_2.00_shift5 (HOXB13)
; positions_6nt_m3 versus M03176_2.00 (HOXB13); m=144/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.604565; -----sCTCGTAAAah- ; cor=; Ncor= a 0 0 0 0 0 11.6191 4.59857 0.35517 2.87691 20.3593 0.083612 84.1808 99.0445 98.7164 66.9663 34.2282 0 c 0 0 0 0 0 36.1158 89.8605 5.32755 86.8172 0.0332668 0.250836 0.317797 0 0.455487 13.3146 31.25 0 g 0 0 0 0 0 36.1577 5.35243 0.23678 0.400583 79.3081 0 0.211864 0 0.0414079 6.06742 7.63423 0 t 0 0 0 0 0 16.1074 0.188466 94.0805 9.90532 0.299401 99.6656 15.2895 0.955546 0.786749 13.6517 26.8876 0

M00538_2.00_rc_shift5 (M00538_2.00_rc)
; positions_6nt_m3 versus M00538_2.00_rc; m=145/246; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.603465; -----rrymrtwaaw-- ; cor=; Ncor= a 0 0 0 0 0 25.5374 27.194 14.0484 32.7127 42.7202 13.6804 49.0305 67.305 57.0495 34.4765 0 0 c 0 0 0 0 0 21.9803 23.8789 28.0085 38.0067 12.1177 11.2006 12.7107 8.6645 12.7295 21.1212 0 0 g 0 0 0 0 0 29.375 36.708 10.832 15.2986 37.5124 7.35932 8.52023 7.76196 10.8473 17.8192 0 0 t 0 0 0 0 0 23.1072 12.219 47.1111 13.9819 7.64973 67.7597 29.7385 16.2686 19.3737 26.5831 0 0

M00297_2.00_rc_shift5 (HOXD13_rc)
; positions_6nt_m3 versus M00297_2.00_rc (HOXD13_rc); m=146/246; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.603345; -----gsgtaywAaa-- ; cor=; Ncor= a 0 0 0 0 0 24.9574 21.532 22.9275 20.2625 63.4014 4.89403 54.5821 79.2274 64.0553 36.5909 0 0 c 0 0 0 0 0 23.504 34.451 16.1567 17.7924 17.107 28.1632 8.58233 6.43867 12.6765 22.1935 0 0 g 0 0 0 0 0 30.483 26.5635 37.0526 15.9391 13.3229 2.99821 7.76562 3.39506 7.31368 16.4414 0 0 t 0 0 0 0 0 21.0557 17.4535 23.8632 46.006 6.16869 63.9446 29.07 10.9389 15.9546 24.7742 0 0

M03101_2.00_shift5 (HOXA13)
; positions_6nt_m3 versus M03101_2.00 (HOXA13); m=147/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.601197; -----wCTCGTAAAAm- ; cor=; Ncor= a 0 0 0 0 0 27.6667 5.37313 0 0 13.3705 4.11392 93.1677 100 100 75.188 41.3333 0 c 0 0 0 0 0 14 89.5522 5.95611 83.5655 1.67131 0.949367 0.310559 0 0 2.50627 26 0 g 0 0 0 0 0 18.3333 5.07463 0 0 83.5655 0 0 0 0 7.76942 10.6667 0 t 0 0 0 0 0 40 0 94.0439 16.4345 1.39276 94.9367 6.52174 0 0 14.5363 22 0

M05757_2.00_shift7 (TCF7)
; positions_6nt_m3 versus M05757_2.00 (TCF7); m=148/246; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.600719; -------asATCAAAg- ; cor=; Ncor= a 0 0 0 0 0 0 0 63.0478 0.742295 85.8103 1.73373 1.30682 97.2601 92.6486 81.1773 7.41288 0 c 0 0 0 0 0 0 0 5.14976 57.9635 0 0.147203 85.2131 0 3.19691 1.38024 20.7177 0 g 0 0 0 0 0 0 0 17.3621 38.8414 0.0143041 0 12.8409 0.162127 1.97683 6.58999 67.8677 0 t 0 0 0 0 0 0 0 14.4404 2.4528 14.1754 98.1191 0.639205 2.57782 2.17761 10.8525 4.00177 0

M03130_2.00_shift5 (HOXC13)
; positions_6nt_m3 versus M03130_2.00 (HOXC13); m=149/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.599777; -----gCTCGTAAAAh- ; cor=; Ncor= a 0 0 0 0 0 13.1265 3.207 0.3108 1.82456 16.5567 0 88.2105 98.8985 99.9205 72.9118 30.9713 0 c 0 0 0 0 0 22.9117 91.6181 1.6317 88.2105 0.263852 0 0.0701754 0.314713 0 10.0348 28.5032 0 g 0 0 0 0 0 39.3795 4.22741 0.3885 0.701754 82.9156 0.396197 0.140351 0.157356 0 5.16241 11.7038 0 t 0 0 0 0 0 24.5823 0.947522 97.669 9.26316 0.263852 99.6038 11.5789 0.629426 0.0794913 11.891 28.8217 0

M05398_2.00_shift5 (HOXA10,HOXC6)
; positions_6nt_m3 versus M05398_2.00 (HOXA10,HOXC6); m=150/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.599581; -----grTCrTWAAmy- ; cor=; Ncor= a 0 0 0 0 0 20.6151 31.1671 3.19285 6.83723 31.8774 0.191755 73.8036 95.2425 81.8396 33.2057 17.5708 0 c 0 0 0 0 0 20.567 13.6074 7.06684 91.8394 0 0 0 0.411711 7.54717 26.2041 36.1498 0 g 0 0 0 0 0 36.4728 55.2255 1.10685 0 67.8618 0 0.177242 0 1.33648 16.6188 20.0192 0 t 0 0 0 0 0 22.345 0 88.6335 1.32333 0.260756 99.8082 26.0191 4.34584 9.27673 23.9713 26.2602 0

M03136_2.00_shift5 (HOXC12)
; positions_6nt_m3 versus M03136_2.00 (HOXC12); m=151/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.599536; -----rGTCGTAAAAh- ; cor=; Ncor= a 0 0 0 0 0 33.7366 20.1085 0.251256 4.26033 8.04278 0 88.2522 99.3756 99.032 75.1618 33.5583 0 c 0 0 0 0 0 6.02606 11.2991 1.55322 91.9931 0.0427807 0.0465116 0.287533 0 0.299608 11.1247 26.5069 0 g 0 0 0 0 0 50.5351 68.5764 0.045683 0.256904 91.9144 0.0232558 0.10269 0.0462535 0 4.70526 8.6572 0 t 0 0 0 0 0 9.70219 0.0159591 98.1498 3.48962 0 99.9302 11.3576 0.578168 0.668357 9.00822 31.2776 0

M06476_2.00_rc_shift7 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M06476_2.00_rc (HOXC5,HOXC6_rc); m=152/246; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.598408; -------tmATAAA--- ; cor=; Ncor= a 0 0 0 0 0 0 0 14.2857 33.3333 85.7143 0 76.1905 100 95.2381 0 0 0 c 0 0 0 0 0 0 0 23.8095 52.381 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 14.2857 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 61.9048 14.2857 0 100 23.8095 0 4.7619 0 0 0

M09395_2.00_rc_shift6 (TCF7L1_rc)
; positions_6nt_m3 versus M09395_2.00_rc (TCF7L1_rc); m=153/246; ncol2=13; w=0; offset=0; strand=R; shift=6; score=0.597191; ------vaswTCAAAGr ; cor=; Ncor= a 0 0 0 0 0 0 34.6 67.6 4.2 61.2 6.8 6.4 98 93.6 94.6 12.6 27 c 0 0 0 0 0 0 27.4 5.4 49.6 1.2 1.8 72 1 1.2 0.2 4.8 21.2 g 0 0 0 0 0 0 30.8 9.8 38.2 0.6 2 17.4 0 5.2 4.6 80.4 40.8 t 0 0 0 0 0 0 7.2 17.2 8 37 89.4 4.2 1 0 0.6 2.2 11

M05890_2.00_shift5 (TCF7)
; positions_6nt_m3 versus M05890_2.00 (TCF7); m=154/246; ncol2=13; w=-1; offset=-1; strand=D; shift=5; score=0.597097; -----aaAsATCAAAgr ; cor=; Ncor= a 0 0 0 0 0 31.6 36.7 69.8 2.4 77.7 5.7 4.3 95 91.4 88.1 11.1 28 c 0 0 0 0 0 23.5 20.4 6.1 43.2 1 0.7 86.7 0.9 3 1.5 19.4 18.3 g 0 0 0 0 0 22.2 19.8 10.4 49.7 1.4 0.8 6 0.4 3.1 3.6 66.3 38.5 t 0 0 0 0 0 22.7 23.1 13.8 4.7 19.9 92.9 3 3.7 2.5 6.8 3.2 15.2

M05075_2.00_rc_shift5 (HOXC11_rc)
; positions_6nt_m3 versus M05075_2.00_rc (HOXC11_rc); m=155/246; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.596236; -----grTCGTWAAay- ; cor=; Ncor= a 0 0 0 0 0 23.572 29.7529 0.492487 1.21424 22.5785 0 69.7101 96.6397 95.9834 47.7053 23.1214 0 c 0 0 0 0 0 20.7765 14.2625 2.5626 96.3906 0 0 0 0.158426 1.78054 18.5264 31.6194 0 g 0 0 0 0 0 41.5617 55.9846 0.200334 0 77.4215 0 0.138338 0 0.115942 10.4878 18.8336 0 t 0 0 0 0 0 14.0897 0 96.7446 2.39521 0 100 30.1516 3.20187 2.12008 23.2805 26.4257 0

M01662_2.00_shift7 (ARID3B,ARID3C)
; positions_6nt_m3 versus M01662_2.00 (ARID3B,ARID3C); m=156/246; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.59518; -------kwATyaaaw- ; cor=; Ncor= a 0 0 0 0 0 0 0 24.246 32.2758 84.0479 3.76409 23.864 56.6849 48.6881 38.9881 30.1875 0 c 0 0 0 0 0 0 0 24.0047 15.7103 2.11994 10.9737 31.8925 10.9957 16.3697 14.6327 23.7463 0 g 0 0 0 0 0 0 0 25.7453 23.6726 10.6057 7.35592 11.0494 16.2405 17.7331 23.8851 20.8515 0 t 0 0 0 0 0 0 0 26.004 28.3413 3.22647 77.9062 33.1941 16.0789 17.209 22.4942 25.2147 0

M03099_2.00_shift5 (HOXA13)
; positions_6nt_m3 versus M03099_2.00 (HOXA13); m=157/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.59513; -----sCTCGTAAAam- ; cor=; Ncor= a 0 0 0 0 0 12.9989 3.1 0.632244 2.45339 20.054 0 81.3716 96.4835 95.8515 60.5935 31.8907 0 c 0 0 0 0 0 32.6112 87.8 4.10959 86.1629 0.989209 0.453515 0.834106 0 1.31004 15.873 32.6879 0 g 0 0 0 0 0 35.4618 7.9 2.73973 0.392542 78.9568 0 0.278035 0 1.63755 6.34921 13.2118 0 t 0 0 0 0 0 18.9282 1.2 92.5184 10.9912 0 99.5465 17.5162 3.51648 1.20087 17.1843 22.2096 0

M03208_2.00_shift5 (HOXD12)
; positions_6nt_m3 versus M03208_2.00 (HOXD12); m=158/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.594452; -----rrTCGTAAAaw- ; cor=; Ncor= a 0 0 0 0 0 27.9033 26.8018 0.251383 6.79012 17.4816 0 78.6039 98.7033 90.1042 53.6359 29.5849 0 c 0 0 0 0 0 14.1881 11.9691 3.2177 83.9065 0 0 1.40438 0 4.45076 17.1082 23.9096 0 g 0 0 0 0 0 42.5118 61.2291 0.854701 3.57143 82.3453 0.262055 0.0826105 0 0 10.2311 15.2916 0 t 0 0 0 0 0 15.3967 0 95.6762 5.73192 0.173085 99.7379 19.9091 1.29668 5.44508 19.0248 31.2139 0

M05771_2.00_shift7 (LEF1)
; positions_6nt_m3 versus M05771_2.00 (LEF1); m=159/246; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.594043; -------asATCAAAg- ; cor=; Ncor= a 0 0 0 0 0 0 0 55.8271 0 86.7657 2.03693 0.820092 98.9794 91.0057 77.5732 7.31287 0 c 0 0 0 0 0 0 0 13.4354 53.5564 0.236327 0.11422 87.8182 0 5.75425 2.06761 24.9914 0 g 0 0 0 0 0 0 0 18.0189 44.7228 0.388251 0 11.3617 0.385134 0 8.361 63.6599 0 t 0 0 0 0 0 0 0 12.7186 1.72084 12.6097 97.8488 0 0.635471 3.24008 11.9982 4.03587 0

M01655_2.00_shift7 (ARID3B,ARID3C)
; positions_6nt_m3 versus M01655_2.00 (ARID3B,ARID3C); m=160/246; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.59331; -------ydATyAaaw- ; cor=; Ncor= a 0 0 0 0 0 0 0 19.6725 40.3679 99.9299 0.0504388 16.5827 73.2498 66.103 51.0165 33.5782 0 c 0 0 0 0 0 0 0 27.0916 8.15014 0.00950887 0.124059 37.6511 5.33279 9.31116 9.89618 22.7343 0 g 0 0 0 0 0 0 0 20.4754 25.9984 0.0187693 0.0417108 3.31468 11.9876 11.3727 17.4991 14.496 0 t 0 0 0 0 0 0 0 32.7605 25.4836 0.0417719 99.7838 42.4515 9.4298 13.2132 21.5882 29.1915 0

M09174_2.00_rc_shift4 (HOXC5,NANOGP8,NKX1-1,NKX1-2,TLX1_rc)
; positions_6nt_m3 versus M09174_2.00_rc (HOXC5,NANOGP8,NKX1-1,NKX1-2,TLX1_rc); m=161/246; ncol2=13; w=-2; offset=-2; strand=R; shift=4; score=0.592608; ----argymATAAATCA ; cor=; Ncor= a 0 0 0 0 43.2264 36.8264 23.746 13.4032 27.8742 81.8995 0.182582 69.7455 89.2697 91.306 11.8079 4.05357 70.8839 c 0 0 0 0 13.3453 9.913 18.037 53.8171 52.6736 3.4 2.35488 18.2359 3.64301 4.09728 0.751872 80.0297 6.30114 g 0 0 0 0 20.3654 38.2683 50.6883 6.26086 1.6037 12.7797 1.73206 6.2704 0.427119 0.352888 4.2011 3.89728 0.591934 t 0 0 0 0 23.0629 14.9923 7.52873 26.5189 17.8485 1.92076 95.7305 5.74821 6.6602 4.24384 83.2391 12.0194 22.2231

M05773_2.00_shift7 (LEF1)
; positions_6nt_m3 versus M05773_2.00 (LEF1); m=162/246; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.591976; -------AsATCAAAG- ; cor=; Ncor= a 0 0 0 0 0 0 0 73.5607 0.275522 83.9367 0.619624 0.893906 99.4746 98.8042 91.3189 6.10774 0 c 0 0 0 0 0 0 0 2.8166 56.7648 0 0 88.9534 0 0.434846 0 17.5556 0 g 0 0 0 0 0 0 0 14.8438 42.0824 0 0 10.1396 0 0.268155 1.6545 74.2492 0 t 0 0 0 0 0 0 0 8.77893 0.87732 16.0633 99.3804 0.0130497 0.525356 0.492825 7.02659 2.08754 0

M05118_2.00_shift5 (HOXC6,HOXD10)
; positions_6nt_m3 versus M05118_2.00 (HOXC6,HOXD10); m=163/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.59098; -----rGTCGTAAAAh- ; cor=; Ncor= a 0 0 0 0 0 31.4635 19.401 0.845187 0 4.95089 0 95.4893 99.7896 98.8535 77.2942 28.5112 0 c 0 0 0 0 0 19.2324 1.69717 1.40177 100 0 0.399076 0 0.210438 0.667084 6.97637 30.8098 0 g 0 0 0 0 0 37.5791 78.9018 0 0 95.0491 0 0 0 0.291849 3.43928 9.57402 0 t 0 0 0 0 0 11.725 0 97.753 0 0 99.6009 4.51067 0 0.187617 12.2901 31.105 0

M05336_2.00_shift5 (HOXC10,HOXC6)
; positions_6nt_m3 versus M05336_2.00 (HOXC10,HOXC6); m=164/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.590597; -----srTCGTAAAay- ; cor=; Ncor= a 0 0 0 0 0 18.6671 28.4534 0.46373 0.87073 20.449 0 78.4895 98.493 96.0797 43.5962 17.2672 0 c 0 0 0 0 0 27.3716 13.1346 2.11991 98.493 0 0 0 0.0334896 1.63345 22.2799 38.4092 0 g 0 0 0 0 0 37.8443 58.353 0 0 79.551 0 0 0 0.130676 12.0219 18.4908 0 t 0 0 0 0 0 16.117 0.0590319 97.4164 0.636303 0 100 21.5105 1.47354 2.15616 22.102 25.8328 0

M05777_2.00_shift7 (LEF1)
; positions_6nt_m3 versus M05777_2.00 (LEF1); m=165/246; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.589083; -------AsATCAAAG- ; cor=; Ncor= a 0 0 0 0 0 0 0 69.7396 0.817057 81.6304 1.38416 2.069 99.5875 99.3258 91.2306 7.84809 0 c 0 0 0 0 0 0 0 2.47122 48.475 0 0 85.4335 0 0.102845 0 16.4949 0 g 0 0 0 0 0 0 0 17.459 48.8164 0 0 12.301 0 0.411382 1.47468 73.0856 0 t 0 0 0 0 0 0 0 10.3302 1.89154 18.3696 98.6158 0.19658 0.412466 0.159982 7.29467 2.57137 0

M04897_2.00_shift5 (HOXA11)
; positions_6nt_m3 versus M04897_2.00 (HOXA11); m=166/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.588486; -----gGTCGTAAAay- ; cor=; Ncor= a 0 0 0 0 0 21.802 20.0801 0.494933 0.942285 11.3598 0 81.0072 98.5046 96.6015 65.2311 22.988 0 c 0 0 0 0 0 14.2375 7.41318 1.39053 97.7621 0 0.86001 0 0 1.81564 11.1914 31.6145 0 g 0 0 0 0 0 52.3729 72.3063 0.306387 0 88.4484 0 0.741753 0.166152 0.418994 7.26187 12.1446 0 t 0 0 0 0 0 11.5876 0.200356 97.8082 1.29564 0.191816 99.14 18.251 1.32922 1.16387 16.3156 33.253 0

M09682_2.00_rc_shift7 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M09682_2.00_rc (HOXC5,HOXC6_rc); m=167/246; ncol2=9; w=0; offset=1; strand=R; shift=7; score=0.586857; -------TmATTAAaa- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.657895 61.8421 93.8596 0.657895 21.4912 87.5 70.3947 64.4737 67.7632 0 c 0 0 0 0 0 0 0 14.2544 36.8421 4.82456 0.657895 8.99123 0 8.99123 14.2544 15.1316 0 g 0 0 0 0 0 0 0 0.657895 0.657895 0.657895 0.657895 0.657895 0 0.657895 20.614 9.86842 0 t 0 0 0 0 0 0 0 84.4298 0.657895 0.657895 98.0263 68.8596 12.5 19.9561 0.657895 7.23684 0

M00474_2.00_rc_shift5 (M00474_2.00_rc)
; positions_6nt_m3 versus M00474_2.00_rc; m=168/246; ncol2=9; w=-1; offset=-1; strand=R; shift=5; score=0.585584; -----gvymrtwaa--- ; cor=; Ncor= a 0 0 0 0 0 24.5353 25.5458 18.9608 28.7651 42.1678 18.2144 46.128 57.3117 51.9248 0 0 0 c 0 0 0 0 0 22.4235 25.8026 27.1771 38.8288 11.9611 17.1537 11.375 13.3099 14.7287 0 0 0 g 0 0 0 0 0 28.5059 33.4641 15.6798 14.4279 33.1704 12.5813 13.0844 13.4436 13.0632 0 0 0 t 0 0 0 0 0 24.5353 15.1875 38.1823 17.9782 12.7007 52.0505 29.4125 15.9348 20.2833 0 0 0

M05079_2.00_shift5 (HOXC11)
; positions_6nt_m3 versus M05079_2.00 (HOXC11); m=169/246; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.585345; -----grTCGTWAAay- ; cor=; Ncor= a 0 0 0 0 0 19.7004 26.9879 1.06333 1.99288 17.5113 0 71.6407 95.447 94.7692 48.8352 21.8531 0 c 0 0 0 0 0 22.9713 13.3319 4.0879 94.9941 0 0 0.357846 0 2.48521 18.9169 33.8162 0 g 0 0 0 0 0 41.598 59.529 0.236295 0.0237248 82.4887 0 0.483092 0.405244 0 10.7086 17.8072 0 t 0 0 0 0 0 15.7303 0.151253 94.6125 2.98932 0 100 27.5183 4.14779 2.74556 21.5392 26.5235 0

M05249_2.00_rc_shift6 (CDX2_rc)
; positions_6nt_m3 versus M05249_2.00_rc (CDX2_rc); m=170/246; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.583876; ------gymATwamc-- ; cor=; Ncor= a 0 0 0 0 0 0 21.1707 0 34.025 69.1972 0 57.5898 65.798 48.0789 20.4697 0 0 c 0 0 0 0 0 0 20.6099 65.2296 52.3077 8.36769 0 11.7279 10.1476 25.1095 35.6116 0 0 g 0 0 0 0 0 0 47.599 0 4.42457 18.6272 0 4.21881 0.299815 10.364 23.0634 0 0 t 0 0 0 0 0 0 10.6204 34.7704 9.2427 3.80791 100 26.4635 23.7546 16.4476 20.8552 0 0

M00421_2.00_rc_shift6 (HOXC6_rc)
; positions_6nt_m3 versus M00421_2.00_rc (HOXC6_rc); m=171/246; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.583697; ------gTmATwAA--- ; cor=; Ncor= a 0 0 0 0 0 0 20.6926 1.18768 37.3687 83.3105 9.80988 33.3301 97.9503 91.1058 0 0 0 c 0 0 0 0 0 0 17.2467 21.1783 57.5626 1.96982 0.00980008 0.00980008 0.0100969 2.54302 0 0 0 g 0 0 0 0 0 0 55.1516 3.53951 0.0100969 14.7099 0.00980008 0.00980008 0.0100969 0.0126518 0 0 0 t 0 0 0 0 0 0 6.90903 74.0945 5.05856 0.00980008 90.1705 66.6503 2.02948 6.33856 0 0 0

M00296_2.00_shift7 (HOXD13)
; positions_6nt_m3 versus M00296_2.00 (HOXD13); m=172/246; ncol2=8; w=0; offset=1; strand=D; shift=7; score=0.582578; -------GkATAAAw-- ; cor=; Ncor= a 0 0 0 0 0 0 0 13.0048 8.66656 90.9539 0.00694252 81.2344 96.5079 98.4626 48.8783 0 0 c 0 0 0 0 0 0 0 3.0088 10.2409 0.00694252 0.00694252 0.00694252 0.00694252 0.00757346 14.4491 0 0 g 0 0 0 0 0 0 0 75.9796 25.1968 2.78395 0.00694252 0.00694252 0.00694252 0.00757346 7.78543 0 0 t 0 0 0 0 0 0 0 8.0068 55.8958 6.25521 99.9792 18.7517 3.4782 1.52227 28.8872 0 0

M05779_2.00_shift7 (TCF7L1)
; positions_6nt_m3 versus M05779_2.00 (TCF7L1); m=173/246; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.582501; -------asATCAAAG- ; cor=; Ncor= a 0 0 0 0 0 0 0 63.6256 2.23614 88.4679 0 3.01058 96.1504 93.6356 85.0356 5.13937 0 c 0 0 0 0 0 0 0 6.99052 45.5277 0 0.461681 87.3881 0 0 3.7213 18.1185 0 g 0 0 0 0 0 0 0 16.2322 50.5367 0 0.369344 9.6013 1.96956 0.523104 3.32542 75.4355 0 t 0 0 0 0 0 0 0 13.1517 1.69946 11.5321 99.169 0 1.88004 5.84133 7.91766 1.30662 0

M06223_2.00_rc_shift7 (M06223_2.00_rc)
; positions_6nt_m3 versus M06223_2.00_rc; m=174/246; ncol2=8; w=0; offset=1; strand=R; shift=7; score=0.579554; -------yAATwAAw-- ; cor=; Ncor= a 0 0 0 0 0 0 0 2.63158 71.0526 100 0 63.1579 89.4737 76.3158 42.1053 0 0 c 0 0 0 0 0 0 0 39.4737 18.4211 0 0 5.26316 0 7.89474 10.5263 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 7.89474 15.7895 0 0 t 0 0 0 0 0 0 0 57.8947 10.5263 0 100 31.5789 10.5263 7.89474 31.5789 0 0

M06225_2.00_rc_shift7 (M06225_2.00_rc)
; positions_6nt_m3 versus M06225_2.00_rc; m=175/246; ncol2=8; w=0; offset=1; strand=R; shift=7; score=0.574034; -------ymATwAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 0 2.04225 56.4085 89.2254 0 50.7746 85.8451 73.3099 36.4789 0 0 c 0 0 0 0 0 0 0 39.3662 27.9577 2.32394 0 3.59155 0.422535 8.16901 21.831 0 0 g 0 0 0 0 0 0 0 1.5493 1.19718 8.4507 0 0.704225 1.05634 9.50704 17.3239 0 0 t 0 0 0 0 0 0 0 57.0423 14.4366 0 100 44.9296 12.6761 9.01408 24.3662 0 0

M00382_2.00_rc_shift5 (HOXC6_rc)
; positions_6nt_m3 versus M00382_2.00_rc (HOXC6_rc); m=176/246; ncol2=9; w=-1; offset=-1; strand=R; shift=5; score=0.574026; -----grymrtwaa--- ; cor=; Ncor= a 0 0 0 0 0 23.6621 25.2747 18.4371 34.6373 53.1765 14.6872 44.8155 58.4872 48.0589 0 0 0 c 0 0 0 0 0 23.4266 23.8028 32.2774 34.9855 9.91071 11.3246 11.0514 11.5745 17.3298 0 0 0 g 0 0 0 0 0 29.4847 34.8065 13.2549 14.6572 25.6262 8.81961 9.23087 13.1814 15.8382 0 0 0 t 0 0 0 0 0 23.4266 16.1159 36.0306 15.72 11.2866 65.1686 34.9023 16.7569 18.7731 0 0 0

M09193_2.00_rc_shift3 (M09193_2.00_rc)
; positions_6nt_m3 versus M09193_2.00_rc; m=177/246; ncol2=12; w=-3; offset=-3; strand=R; shift=3; score=0.567491; ---arrGymATAAAa-- ; cor=; Ncor= a 0 0 0 56 47.6 40.6 14.6 4 42.2 92.4 1.6 92.8 97.8 96.2 59 0 0 c 0 0 0 12.2 16 4 6.2 56.2 46 1.2 1.6 2 0.2 1.2 13 0 0 g 0 0 0 22.6 25 43 75.4 1.2 0.6 6.2 1.8 1.8 1.2 0.8 16.2 0 0 t 0 0 0 9.2 11.4 12.4 3.8 38.6 11.2 0.2 95 3.4 0.8 1.8 11.8 0 0

M10779_2.00_rc_shift3 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M10779_2.00_rc (HOXC5,HOXC6_rc); m=178/246; ncol2=14; w=-3; offset=-3; strand=R; shift=3; score=0.565029; ---sbsGcCATaAAbsy ; cor=; Ncor= a 0 0 0 22.2222 12.9032 19.4444 2.5 9.52381 20.9302 68.8889 15.5556 53.3333 74.359 77.7778 20.5882 10.3448 12.5 c 0 0 0 25.9259 25.8065 30.5556 15 57.1429 69.7674 2.22222 0 17.7778 10.2564 19.4444 26.4706 37.931 33.3333 g 0 0 0 33.3333 25.8065 27.7778 80 9.52381 4.65116 15.5556 4.44444 4.44444 5.12821 2.77778 26.4706 41.3793 20.8333 t 0 0 0 18.5185 35.4839 22.2222 2.5 23.8095 4.65116 13.3333 80 24.4444 10.2564 0 26.4706 10.3448 33.3333

M09173_2.00_rc_shift3 (HOXC5,NANOGP8,NKX1-1,NKX1-2,TLX1_rc)
; positions_6nt_m3 versus M09173_2.00_rc (HOXC5,NANOGP8,NKX1-1,NKX1-2,TLX1_rc); m=179/246; ncol2=12; w=-3; offset=-3; strand=R; shift=3; score=0.558652; ---rrrGymATAAAa-- ; cor=; Ncor= a 0 0 0 43.8 38.4 42.4 17 0.8 46.4 96.2 0.2 85.6 98.2 93.4 52.8 0 0 c 0 0 0 15 18.4 4.4 8.6 59.6 45.6 0 0 6.4 0.8 1.4 17.2 0 0 g 0 0 0 26.8 32 31 71.4 0.6 0.4 3.4 0.2 5.8 0.2 4.4 21.6 0 0 t 0 0 0 14.4 11.2 22.2 3 39 7.6 0.4 99.6 2.2 0.8 0.8 8.4 0 0

M00436_2.00_rc_shift6 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M00436_2.00_rc (HOXC5,HOXC6_rc); m=180/246; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.55629; ------gymatwaa--- ; cor=; Ncor= a 0 0 0 0 0 0 24.3036 18.7831 30.688 57.7296 17.1082 32.5762 52.4827 37.6344 0 0 0 c 0 0 0 0 0 0 21.772 39.3682 34.6006 12.3761 12.8015 12.5986 15.6502 21.9314 0 0 0 g 0 0 0 0 0 0 35.1851 12.9742 17.1822 20.817 10.3767 9.0574 12.9421 18.5028 0 0 0 t 0 0 0 0 0 0 18.7393 28.8745 17.5293 9.07724 59.7136 45.7679 18.925 21.9314 0 0 0

M06275_2.00_rc_shift7 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M06275_2.00_rc (HOXC5,HOXC6_rc); m=181/246; ncol2=8; w=0; offset=1; strand=R; shift=7; score=0.555289; -------YmATWAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 0 2.25564 43.985 91.3534 0 25.188 96.9925 79.3233 44.7368 0 0 c 0 0 0 0 0 0 0 26.3158 48.8722 0 1.12782 0 0.75188 3.00752 18.4211 0 0 g 0 0 0 0 0 0 0 0 1.50376 8.64662 0 0 0 6.76692 16.9173 0 0 t 0 0 0 0 0 0 0 71.4286 5.6391 0 98.8722 74.812 2.25564 10.9023 19.9248 0 0

M06251_2.00_rc_shift6 (DBX1,DBX2,HLX_rc)
; positions_6nt_m3 versus M06251_2.00_rc (DBX1,DBX2,HLX_rc); m=182/246; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.55338; ------byAATwAw--- ; cor=; Ncor= a 0 0 0 0 0 0 14.0952 5.33333 72 85.5238 1.71429 63.2381 80.5714 49.9048 0 0 0 c 0 0 0 0 0 0 27.8095 33.3333 18.8571 10.0952 0 3.80952 5.90476 13.5238 0 0 0 g 0 0 0 0 0 0 26.6667 1.90476 7.42857 0 3.04762 0.380952 2.47619 5.33333 0 0 0 t 0 0 0 0 0 0 31.4286 59.4286 1.71429 4.38095 95.2381 32.5714 11.0476 31.2381 0 0 0

M06202_2.00_shift3 (FOXP4)
; positions_6nt_m3 versus M06202_2.00 (FOXP4); m=183/246; ncol2=14; w=-3; offset=-3; strand=D; shift=3; score=0.552104; ---aarrbyAAAAAAAt ; cor=; Ncor= a 0 0 0 59.0909 54.5455 36.3636 45.4545 9.09091 4.54545 90.9091 100 100 100 100 100 100 18.1818 c 0 0 0 18.1818 13.6364 13.6364 22.7273 36.3636 40.9091 0 0 0 0 0 0 0 4.54545 g 0 0 0 22.7273 18.1818 36.3636 27.2727 27.2727 18.1818 9.09091 0 0 0 0 0 0 18.1818 t 0 0 0 0 13.6364 13.6364 4.54545 27.2727 36.3636 0 0 0 0 0 0 0 59.0909

M02075_2.00_rc_shift6 (M02075_2.00_rc)
; positions_6nt_m3 versus M02075_2.00_rc; m=184/246; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.550188; ------GTmRTwAA--- ; cor=; Ncor= a 0 0 0 0 0 0 25 0.0332889 58.0219 74.1302 3.25387 41.9137 99.9001 92.2043 0 0 0 c 0 0 0 0 0 0 5.03992 16.6778 41.9137 0.0322165 0.0322165 0.0322165 0.0332889 3.87865 0 0 0 g 0 0 0 0 0 0 69.9102 0.0332889 0.0322165 25.8054 0.0322165 0.0322165 0.0332889 0.0384025 0 0 0 t 0 0 0 0 0 0 0.0499002 83.2557 0.0322165 0.0322165 96.6817 58.0219 0.0332889 3.87865 0 0 0

M00207_2.00_shift8 (M00207_2.00)
; positions_6nt_m3 versus M00207_2.00; m=185/246; ncol2=8; w=0; offset=2; strand=D; shift=8; score=0.543792; --------satcaaag- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.4088 42.1098 24.8778 18.2174 65.195 61.9209 49.3892 24.537 0 c 0 0 0 0 0 0 0 0 29.2455 16.7815 13.929 43.9204 3.18159 10.1336 10.802 21.7624 0 g 0 0 0 0 0 0 0 0 32.3213 17.9983 15.8628 21.3784 10.5633 13.2747 16.9409 35.5231 0 t 0 0 0 0 0 0 0 0 19.0245 23.1103 45.3303 16.4838 21.0601 14.6708 22.8679 18.1775 0

M00427_2.00_rc_shift5 (M00427_2.00_rc)
; positions_6nt_m3 versus M00427_2.00_rc; m=186/246; ncol2=9; w=-1; offset=-1; strand=R; shift=5; score=0.541107; -----grymATwaa--- ; cor=; Ncor= a 0 0 0 0 0 24.48 25.0152 10.3358 44.5757 74.2688 10.0026 47.7017 58.549 52.1553 0 0 0 c 0 0 0 0 0 21.4958 21.7472 39.473 32.6939 6.40892 4.31822 15.2559 9.20608 14.6469 0 0 0 g 0 0 0 0 0 30.504 39.2316 7.43067 7.59271 17.7732 2.34631 3.76206 11.1324 16.35 0 0 0 t 0 0 0 0 0 23.5202 14.006 42.7605 15.1377 1.54913 83.3329 33.2803 21.1125 16.8479 0 0 0

M06210_2.00_rc_shift6 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M06210_2.00_rc (HOXC5,HOXC6_rc); m=187/246; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.541061; ------kmmATwAw--- ; cor=; Ncor= a 0 0 0 0 0 0 13.5135 27.027 59.4595 97.2973 0 29.7297 89.1892 48.6486 0 0 0 c 0 0 0 0 0 0 5.40541 40.5405 40.5405 0 0 5.40541 2.7027 5.40541 0 0 0 g 0 0 0 0 0 0 35.1351 8.10811 0 0 0 0 0 10.8108 0 0 0 t 0 0 0 0 0 0 45.9459 24.3243 0 2.7027 100 64.8649 8.10811 35.1351 0 0 0

M09676_2.00_rc_shift7 (HOXC5,NKX1-1,NKX1-2,OTP,SEBOX,TLX1_rc)
; positions_6nt_m3 versus M09676_2.00_rc (HOXC5,NKX1-1,NKX1-2,OTP,SEBOX,TLX1_rc); m=188/246; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.537684; -------TCATwAa--- ; cor=; Ncor= a 0 0 0 0 0 0 0 4.54545 18.1818 100 0 44.697 96.0227 59.4697 0 0 0 c 0 0 0 0 0 0 0 18.1818 79.5455 0 2.27273 0 0.568182 3.40909 0 0 0 g 0 0 0 0 0 0 0 0 2.27273 0 2.27273 2.27273 2.84091 14.7727 0 0 0 t 0 0 0 0 0 0 0 77.2727 0 0 95.4545 53.0303 0.568182 22.3485 0 0 0

M00447_2.00_rc_shift5 (M00447_2.00_rc)
; positions_6nt_m3 versus M00447_2.00_rc; m=189/246; ncol2=9; w=-1; offset=-1; strand=R; shift=5; score=0.535815; -----grymATwaa--- ; cor=; Ncor= a 0 0 0 0 0 24.4899 25.7031 9.83479 42.1201 69.7472 6.45151 52.7099 56.9509 52.035 0 0 0 c 0 0 0 0 0 22.1594 20.8345 41.0966 31.2033 6.52002 4.03221 11.7612 9.79811 15.6726 0 0 0 g 0 0 0 0 0 30.5164 39.9094 7.97193 7.17444 21.8648 0.00950739 3.2375 10.0965 13.9004 0 0 0 t 0 0 0 0 0 22.8343 13.553 41.0966 19.5021 1.86802 89.5068 32.2915 23.1545 18.392 0 0 0

M06550_2.00_rc_shift7 (DBX1,DBX2,HLX_rc)
; positions_6nt_m3 versus M06550_2.00_rc (DBX1,DBX2,HLX_rc); m=190/246; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.534171; -------TmATwAA--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 50 100 0 50 87.5 87.5 0 0 0 c 0 0 0 0 0 0 0 18.75 37.5 0 0 12.5 0 0 0 0 0 g 0 0 0 0 0 0 0 0 12.5 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 81.25 0 0 100 37.5 12.5 12.5 0 0 0

M00391_2.00_rc_shift5 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M00391_2.00_rc (HOXC5,HOXC6_rc); m=191/246; ncol2=9; w=-1; offset=-1; strand=R; shift=5; score=0.529126; -----kgymatwaa--- ; cor=; Ncor= a 0 0 0 0 0 22.9617 23.2602 17.2564 34.862 57.617 17.4107 33.3467 54.8166 40.9599 0 0 0 c 0 0 0 0 0 22.507 23.0288 34.7501 33.1617 11.9869 13.1587 12.8965 13.9293 19.9373 0 0 0 g 0 0 0 0 0 28.8996 36.4793 14.2703 16.4676 20.7764 12.7698 11.7866 15.5489 18.965 0 0 0 t 0 0 0 0 0 25.6317 17.2316 33.7231 15.5086 9.61974 56.6608 41.9702 15.7052 20.1377 0 0 0

M00481_2.00_rc_shift6 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M00481_2.00_rc (HOXC5,HOXC6_rc); m=192/246; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.528887; ------gymaTwaa--- ; cor=; Ncor= a 0 0 0 0 0 0 24.58 17.8676 33.4745 59.0307 16.0144 29.6859 52.4723 36.3628 0 0 0 c 0 0 0 0 0 0 23.3812 37.0767 35.1907 12.0379 9.33236 13.206 14.5893 22.5007 0 0 0 g 0 0 0 0 0 0 34.19 11.5074 15.041 19.6496 6.38204 7.1755 14.0172 20.9795 0 0 0 t 0 0 0 0 0 0 17.8488 33.5484 16.2938 9.28182 68.2712 49.9325 18.9212 20.1569 0 0 0

M01680_2.00_shift6 (M01680_2.00)
; positions_6nt_m3 versus M01680_2.00; m=193/246; ncol2=8; w=0; offset=0; strand=D; shift=6; score=0.528471; ------AAAATAAA--- ; cor=; Ncor= a 0 0 0 0 0 0 99.0132 99.2574 99.2574 99.2574 25 99.2574 99.2574 99.0132 0 0 0 c 0 0 0 0 0 0 0.328947 0.247525 0.247525 0.247525 0.247525 0.247525 0.247525 0.328947 0 0 0 g 0 0 0 0 0 0 0.328947 0.247525 0.247525 0.247525 0.247525 0.247525 0.247525 0.328947 0 0 0 t 0 0 0 0 0 0 0.328947 0.247525 0.247525 0.247525 74.505 0.247525 0.247525 0.328947 0 0 0

M01557_2.00_shift6 (M01557_2.00)
; positions_6nt_m3 versus M01557_2.00; m=194/246; ncol2=8; w=0; offset=0; strand=D; shift=6; score=0.52553; ------TTAATAAA--- ; cor=; Ncor= a 0 0 0 0 0 0 0.961538 0.961538 97.1154 97.1154 0.961538 97.1154 97.1154 97.1154 0 0 0 c 0 0 0 0 0 0 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0 0 0 g 0 0 0 0 0 0 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0 0 0 t 0 0 0 0 0 0 97.1154 97.1154 0.961538 0.961538 97.1154 0.961538 0.961538 0.961538 0 0 0

M04857_2.00_shift1 (FOXR2)
; positions_6nt_m3 versus M04857_2.00 (FOXR2); m=195/246; ncol2=17; w=-5; offset=-5; strand=D; shift=1; score=0.525352; -ayrTAwACATAAAtrw ; cor=; Ncor= a 0 61.0519 10.0686 65.5193 1.72414 99.8007 56.0563 89.6181 0.060024 98.6211 0.462963 99.4702 72.0384 99.2074 22.4082 53.8615 39.4404 c 0 6.65779 36.1556 8.21256 17.2414 0.13289 1.69014 0.0596659 90.1561 0.722259 0.0661376 0.0662252 6.09113 0.264201 7.55102 9.98668 18.8541 g 0 23.3688 4.00458 25.1812 0.107759 0.0664452 13.7465 10.0239 0 0.328299 0.132275 0.0662252 4.22062 0.264201 8.73469 35.486 3.73085 t 0 8.92144 49.7712 1.08696 80.9267 0 28.507 0.298329 9.78391 0.328299 99.3386 0.397351 17.6499 0.264201 61.3061 0.665779 37.9747

M02196_2.00_rc_shift6 (M02196_2.00_rc)
; positions_6nt_m3 versus M02196_2.00_rc; m=196/246; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.523346; ------GYMATwAA--- ; cor=; Ncor= a 0 0 0 0 0 0 17.6557 0.0227066 69.964 86.2265 0.0195925 35.2861 97.8997 81.5195 0 0 0 c 0 0 0 0 0 0 5.90482 27.2707 25.9992 3.93809 0.0195925 0.0195925 0.0203915 5.28391 0 0 0 g 0 0 0 0 0 0 73.4724 2.29337 0.019984 9.81583 1.97884 0.0195925 0.0203915 2.6551 0 0 0 t 0 0 0 0 0 0 2.9671 70.4133 4.01679 0.0195925 97.982 64.6748 2.05954 10.5415 0 0 0

M02110_2.00_rc_shift6 (M02110_2.00_rc)
; positions_6nt_m3 versus M02110_2.00_rc; m=197/246; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.521048; ------cwCRTCAA--- ; cor=; Ncor= a 0 0 0 0 0 0 4.80038 39.98 2.88242 68.3754 0.0262881 0.0262881 97.2192 86.1226 0 0 0 c 0 0 0 0 0 0 52.3289 23.3356 85.645 0.0262881 0.0262881 92.0347 0.0269978 6.92149 0 0 0 g 0 0 0 0 0 0 19.0589 3.36218 0.0285388 31.572 0.0262881 7.91272 0.0269978 0.0344353 0 0 0 t 0 0 0 0 0 0 23.8118 33.3222 11.4441 0.0262881 99.9211 0.0262881 2.72678 6.92149 0 0 0

M00294_2.00_shift7 (HOXD13)
; positions_6nt_m3 versus M00294_2.00 (HOXD13); m=198/246; ncol2=8; w=0; offset=1; strand=D; shift=7; score=0.520143; -------TyGTWAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 0 1.84336 17.0394 4.5805 0.651445 72.8909 97.4007 91.3478 60.5917 0 0 c 0 0 0 0 0 0 0 22.0194 49.6223 0.00653424 0.00644995 0.00644995 0.00644995 4.3225 14.1458 0 0 g 0 0 0 0 0 0 0 0.926266 2.96949 77.1106 0.00644995 1.29644 0.00644995 0.00719217 4.04887 0 0 t 0 0 0 0 0 0 0 75.2109 30.3688 18.3024 99.3357 25.8062 2.58643 4.3225 21.2137 0 0

M10558_2.00_shift4 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXL1,FOXS1)
; positions_6nt_m3 versus M10558_2.00 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXL1,FOXS1); m=199/246; ncol2=16; w=-2; offset=-2; strand=D; shift=4; score=0.519186; ----wwdayATAAAyAw ; cor=; Ncor= a 0 0 0 0 30.4348 43.4783 26.087 56.5217 17.3913 91.3043 0 95.6522 100 100 0 91.3043 39.1304 c 0 0 0 0 4.34783 17.3913 13.0435 17.3913 43.4783 0 8.69565 4.34783 0 0 60.8696 4.34783 17.3913 g 0 0 0 0 17.3913 8.69565 26.087 17.3913 8.69565 8.69565 0 0 0 0 0 4.34783 8.69565 t 0 0 0 0 47.8261 30.4348 34.7826 8.69565 30.4348 0 91.3043 0 0 0 39.1304 0 34.7826

M01667_2.00_shift7 (ARID3B,ARID3C)
; positions_6nt_m3 versus M01667_2.00 (ARID3B,ARID3C); m=200/246; ncol2=8; w=0; offset=1; strand=D; shift=7; score=0.517406; -------yrATyaaa-- ; cor=; Ncor= a 0 0 0 0 0 0 0 24.5252 30.832 94.1882 5.17629 19.1668 56.2171 50.2612 41.6728 0 0 c 0 0 0 0 0 0 0 27.1045 19.6593 0.0248548 3.50464 30.9749 10.0666 15.9145 14.8775 0 0 g 0 0 0 0 0 0 0 21.5355 25.4968 0.0593262 0.0248248 8.87446 16.2683 17.5883 23.567 0 0 t 0 0 0 0 0 0 0 26.8348 24.012 5.72759 91.2942 40.9838 17.4479 16.236 19.8827 0 0

M06203_2.00_shift3 (FOXP4)
; positions_6nt_m3 versus M06203_2.00 (FOXP4); m=201/246; ncol2=15; w=-3; offset=-3; strand=D; shift=3; score=0.517302; ---mmmmarAAAAAAws ; cor=; Ncor= a 0 0 0 33.7066 33.6656 32.2296 31.5673 42.1634 49.3377 96.0265 99.5585 100 99.117 100 98.6755 44.9227 12.792 c 0 0 0 27.8835 32.2259 26.4901 27.8146 21.0817 5.96026 0 0 0 0 0 0.993377 7.28477 37.3749 g 0 0 0 24.86 19.0476 20.9713 20.3091 15.011 31.7881 0.993377 0 0 0.883002 0 0.331126 3.31126 34.2603 t 0 0 0 13.5498 15.0609 20.3091 20.3091 21.7439 12.9139 2.98013 0.441501 0 0 0 0 44.4812 15.5729

M06499_2.00_rc_shift7 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M06499_2.00_rc (HOXC5,HOXC6_rc); m=202/246; ncol2=8; w=0; offset=1; strand=R; shift=7; score=0.516349; -------YMATTAAr-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 70 100 0 15 100 100 45 0 0 c 0 0 0 0 0 0 0 30 30 0 0 0 0 0 15 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 t 0 0 0 0 0 0 0 70 0 0 100 85 0 0 15 0 0

M06273_2.00_rc_shift7 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M06273_2.00_rc (HOXC5,HOXC6_rc); m=203/246; ncol2=8; w=0; offset=1; strand=R; shift=7; score=0.516349; -------YMATTAAr-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 70 100 0 15 100 100 45 0 0 c 0 0 0 0 0 0 0 30 30 0 0 0 0 0 15 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 t 0 0 0 0 0 0 0 70 0 0 100 85 0 0 15 0 0

M05899_2.00_shift8 (ARID3B,ARID3C)
; positions_6nt_m3 versus M05899_2.00 (ARID3B,ARID3C); m=204/246; ncol2=8; w=0; offset=2; strand=D; shift=8; score=0.516111; --------AATyAAAm- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 80.9524 100 0 4.7619 95.2381 85.7143 90.4762 45 0 c 0 0 0 0 0 0 0 0 0 0 0 61.9048 0 9.52381 9.52381 40 0 g 0 0 0 0 0 0 0 0 4.7619 0 0 0 4.7619 4.7619 0 5 0 t 0 0 0 0 0 0 0 0 14.2857 0 100 33.3333 0 0 0 10 0

M04970_2.00_rc_shift6 (HOXA5,HOXC5,HOXC6,NKX1-1,NKX1-2,OTP_rc)
; positions_6nt_m3 versus M04970_2.00_rc (HOXA5,HOXC5,HOXC6,NKX1-1,NKX1-2,OTP_rc); m=205/246; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.516057; ------rtCRTTAa--- ; cor=; Ncor= a 0 0 0 0 0 0 39.3514 11.9942 1.29263 69.874 3.41623 18.8177 91.9524 47.396 0 0 0 c 0 0 0 0 0 0 12.7171 10.2303 89.2464 1.53317 7.48838 6.54332 0.651743 15.1618 0 0 0 g 0 0 0 0 0 0 43.5138 10.4379 5.50055 28.5928 0.409948 1.42148 6.68745 19.7227 0 0 0 t 0 0 0 0 0 0 4.41777 67.3376 3.9604 0 88.6854 73.2175 0.708416 17.7196 0 0 0

M04923_2.00_rc_shift6 (DLX3,NANOGP8,NKX1-1,NKX1-2_rc)
; positions_6nt_m3 versus M04923_2.00_rc (DLX3,NANOGP8,NKX1-1,NKX1-2_rc); m=206/246; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.515516; ------vtcrTwAw--- ; cor=; Ncor= a 0 0 0 0 0 0 39.0538 21.8274 14.8098 64.5028 9.20428 27.0164 100 36.6452 0 0 0 c 0 0 0 0 0 0 30.1935 5.94634 62.6922 0 15.38 5.63821 0 13.6774 0 0 0 g 0 0 0 0 0 0 30.4086 16.0503 10.143 35.4972 6.4133 6.68233 0 17.1183 0 0 0 t 0 0 0 0 0 0 0.344086 56.176 12.355 0 69.0024 60.663 0 32.5591 0 0 0

M02183_2.00_shift6 (M02183_2.00)
; positions_6nt_m3 versus M02183_2.00; m=207/246; ncol2=8; w=0; offset=0; strand=D; shift=6; score=0.514492; ------GYAATwAA--- ; cor=; Ncor= a 0 0 0 0 0 0 9.14855 0.0766871 92.1012 99.7699 0.0766871 53.7577 99.7508 88.6062 0 0 0 c 0 0 0 0 0 0 0.0905797 30.7515 7.7454 0.0766871 0.0766871 0.0766871 0.0830565 11.1726 0 0 0 g 0 0 0 0 0 0 90.6703 0.0766871 0.0766871 0.0766871 0.0766871 0.0766871 0.0830565 0.110619 0 0 0 t 0 0 0 0 0 0 0.0905797 69.0951 0.0766871 0.0766871 99.7699 46.089 0.0830565 0.110619 0 0 0

M00258_2.00_shift8 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1)
; positions_6nt_m3 versus M00258_2.00 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1); m=208/246; ncol2=11; w=0; offset=2; strand=D; shift=8; score=0.513193; --------catamAAyA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 22.5433 39.6289 12.8087 67.6798 60.8196 78.6392 70.8551 9.70097 83.2678 c 0 0 0 0 0 0 0 0 32.37 19.479 21.478 9.85135 28.471 9.34316 9.35625 49.9877 2.48136 g 0 0 0 0 0 0 0 0 22.5433 21.771 24.1525 11.993 0.0246932 0.0246932 0.0246932 9.34316 2.48136 t 0 0 0 0 0 0 0 0 22.5433 19.1212 41.5607 10.4758 10.6847 11.993 19.7639 30.9682 11.7695

M04858_2.00_shift1 (FOXR2)
; positions_6nt_m3 versus M04858_2.00 (FOXR2); m=209/246; ncol2=17; w=-5; offset=-5; strand=D; shift=1; score=0.512107; -ryrTAaACATAAATrw ; cor=; Ncor= a 0 58.4032 3.204 53.3213 0.625711 100 58.751 95.4047 0 98.6814 0.0310655 99.536 80.9967 100 14.9056 49.767 32.5979 c 0 7.36253 47.5015 2.83816 7.84983 0 1.25932 0 95.6031 0.398651 0 0.061862 4.22854 0 10.8483 4.16278 23.3375 g 0 26.0019 2.20459 43.8406 0 0 16.037 4.59532 0 0.919963 0 0.402103 2.8442 0 4.42612 45.4489 1.61591 t 0 8.23237 47.0899 0 91.5245 0 23.9527 0 4.39691 0 99.9689 0 11.9305 0 69.8199 0.621311 42.4487

M11390_2.00_shift8 (TBP,TBPL2)
; positions_6nt_m3 versus M11390_2.00 (TBP,TBPL2); m=210/246; ncol2=8; w=0; offset=2; strand=D; shift=8; score=0.51161; --------tATAAATw- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 6.38298 72.3404 0 100 100 85.1064 6.38298 44.6809 0 c 0 0 0 0 0 0 0 0 8.51064 0 0 0 0 2.12766 6.38298 8.51064 0 g 0 0 0 0 0 0 0 0 19.1489 12.766 0 0 0 8.51064 12.766 8.51064 0 t 0 0 0 0 0 0 0 0 65.9574 14.8936 100 0 0 4.25532 74.4681 38.2979 0

M03046_2.00_shift9 (FOXI2,FOXI3,FOXJ3)
; positions_6nt_m3 versus M03046_2.00 (FOXI2,FOXI3,FOXJ3); m=211/246; ncol2=8; w=0; offset=3; strand=D; shift=9; score=0.509487; ---------rTAAAcAA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 45.3438 12.9527 91.046 92.2151 90.047 23.4165 99.3945 70.5774 c 0 0 0 0 0 0 0 0 0 0 4.91099 3.56577 0.963082 0 55.1344 0 9.09091 g 0 0 0 0 0 0 0 0 0 54.6562 11.6022 3.09033 2.16693 4.62382 14.3954 0.605536 7.55528 t 0 0 0 0 0 0 0 0 0 0 70.5341 2.29794 4.6549 5.32915 7.05374 0 12.7764

M08960_2.00_rc_shift3 (ZNF350_rc)
; positions_6nt_m3 versus M08960_2.00_rc (ZNF350_rc); m=212/246; ncol2=18; w=-3; offset=-3; strand=R; shift=3; score=0.509398; ---twgGwmatAAAArr ; cor=; Ncor= a 0 0 0 19.8 37.2 23.4 16.4 25.4 25.8 65.6 17.2 77.6 94.8 96.4 76.6 36.4 30.4 c 0 0 0 24.2 11 5.6 10.6 8.6 43.4 7.6 11.8 6.2 1.8 1.6 1.8 5.4 5.6 g 0 0 0 13.2 19.6 67 68.2 18.2 6.4 3.6 19 11.2 2.8 1.8 14 53.4 57.4 t 0 0 0 42.8 32.2 4 4.8 47.8 24.4 23.2 52 5 0.6 0.2 7.6 4.8 6.6

M00477_2.00_rc_shift5 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M00477_2.00_rc (HOXC5,HOXC6_rc); m=213/246; ncol2=9; w=-1; offset=-1; strand=R; shift=5; score=0.503992; -----ggymatwaa--- ; cor=; Ncor= a 0 0 0 0 0 24.9294 24.1345 18.7621 36.4827 62.9137 19.8235 31.0419 61.7893 38.7129 0 0 0 c 0 0 0 0 0 21.0321 21.6205 31.2444 30.7792 5.32155 6.53301 7.42861 5.66174 17.5697 0 0 0 g 0 0 0 0 0 29.8459 36.0045 17.1473 19.0457 21.3652 18.6691 17.0362 19.5648 24.6844 0 0 0 t 0 0 0 0 0 24.1926 18.2405 32.8463 13.6924 10.3996 54.9744 44.4933 12.9842 19.033 0 0 0

M00366_2.00_rc_shift6 (POU3F4_rc)
; positions_6nt_m3 versus M00366_2.00_rc (POU3F4_rc); m=214/246; ncol2=7; w=0; offset=0; strand=R; shift=6; score=0.501366; ------ykmaTww---- ; cor=; Ncor= a 0 0 0 0 0 0 21.3714 21.1802 34.5888 66.772 13.6384 41.6191 40.8076 0 0 0 0 c 0 0 0 0 0 0 25.8434 11.978 40.5903 4.39859 6.37822 9.37981 17.0964 0 0 0 0 g 0 0 0 0 0 0 14.6151 39.3725 12.3484 12.1981 5.32754 11.3425 16.5911 0 0 0 0 t 0 0 0 0 0 0 38.1702 27.4693 12.4725 16.6313 74.6559 37.6585 25.5048 0 0 0 0

M00360_2.00_shift6 (POU4F3)
; positions_6nt_m3 versus M00360_2.00 (POU4F3); m=215/246; ncol2=7; w=0; offset=0; strand=D; shift=6; score=0.499869; ------tgmataw---- ; cor=; Ncor= a 0 0 0 0 0 0 22.2454 20.8561 32.9493 58.1249 16.4889 50.4778 33.8573 0 0 0 0 c 0 0 0 0 0 0 17.8523 13.7034 40.6489 16.4874 15.3742 8.94894 21.3735 0 0 0 0 g 0 0 0 0 0 0 15.9927 42.8474 12.8709 15.6833 12.8416 17.6641 17.325 0 0 0 0 t 0 0 0 0 0 0 43.9096 22.5931 13.5308 9.70454 55.2953 22.9091 27.4442 0 0 0 0

M09679_2.00_rc_shift5 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M09679_2.00_rc (HOXC5,HOXC6_rc); m=216/246; ncol2=9; w=-1; offset=-1; strand=R; shift=5; score=0.49903; -----kgymATTAa--- ; cor=; Ncor= a 0 0 0 0 0 17.6699 23.3555 4.56439 36.8176 95.3939 0.568182 15.8014 89.2403 65.2468 0 0 0 c 0 0 0 0 0 14.3301 19.9713 41.178 59.5298 3.09091 0.568182 2.36742 1.32576 2.89502 0 0 0 g 0 0 0 0 0 40.6872 42.6001 3.56439 0.662879 0.568182 0.568182 0.852273 0.94697 22.8636 0 0 0 t 0 0 0 0 0 27.3128 14.0731 50.6932 2.98972 0.94697 98.2955 80.9789 8.48701 8.99459 0 0 0

M06489_2.00_rc_shift7 (DBX1,DBX2,HLX_rc)
; positions_6nt_m3 versus M06489_2.00_rc (DBX1,DBX2,HLX_rc); m=217/246; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.498338; -------ThATwAa--- ; cor=; Ncor= a 0 0 0 0 0 0 0 3.125 46.875 100 3.125 43.75 90.625 59.375 0 0 0 c 0 0 0 0 0 0 0 21.875 28.125 0 0 3.125 0 12.5 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 3.125 3.125 9.375 0 0 0 t 0 0 0 0 0 0 0 75 25 0 96.875 50 6.25 18.75 0 0 0

M00365_2.00_shift6 (POU3F4)
; positions_6nt_m3 versus M00365_2.00 (POU3F4); m=218/246; ncol2=7; w=0; offset=0; strand=D; shift=6; score=0.496742; ------tgmatww---- ; cor=; Ncor= a 0 0 0 0 0 0 22.4589 22.08 32.1329 59.7235 20.9486 46.3542 34.4888 0 0 0 0 c 0 0 0 0 0 0 22.9126 13.6627 38.0873 5.41799 8.18311 8.63921 20.0983 0 0 0 0 g 0 0 0 0 0 0 16.4724 41.0452 15.4851 15.1761 10.4028 14.2437 18.553 0 0 0 0 t 0 0 0 0 0 0 38.1561 23.2121 14.2946 19.6824 60.4655 30.763 26.8599 0 0 0 0

M10761_2.00_shift8 (NKX2-6)
; positions_6nt_m3 versus M10761_2.00 (NKX2-6); m=219/246; ncol2=7; w=0; offset=2; strand=D; shift=8; score=0.496197; --------yatAAAk-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 5.26316 52.6316 5.26316 68.4211 94.7368 73.6842 10.5263 0 0 c 0 0 0 0 0 0 0 0 47.3684 10.5263 21.0526 10.5263 0 5.26316 10.5263 0 0 g 0 0 0 0 0 0 0 0 15.7895 15.7895 15.7895 0 0 0 31.5789 0 0 t 0 0 0 0 0 0 0 0 31.5789 21.0526 57.8947 21.0526 5.26316 21.0526 47.3684 0 0

M09386_2.00_rc_shift3 (TCF7_rc)
; positions_6nt_m3 versus M09386_2.00_rc (TCF7_rc); m=220/246; ncol2=16; w=-3; offset=-3; strand=R; shift=3; score=0.492501; ---rammASWTCAAAGg ; cor=; Ncor= a 0 0 0 45.8 45.2 28.2 29.4 76 3 68 11.4 6.6 96 86.4 90 19 24 c 0 0 0 12.8 24.2 45.2 48 5.4 68.2 6.6 2 70 1.2 6.8 0.2 4 21.4 g 0 0 0 27.4 19 12.8 15.8 8.8 27.4 0.2 2.8 21.2 0.6 6 7.2 75.8 48.6 t 0 0 0 14 11.6 13.8 6.8 9.8 1.4 25.2 83.8 2.2 2.2 0.8 2.6 1.2 6

M00517_2.00_rc_shift5 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M00517_2.00_rc (HOXC5,HOXC6_rc); m=221/246; ncol2=9; w=-1; offset=-1; strand=R; shift=5; score=0.492061; -----rgymaTwaa--- ; cor=; Ncor= a 0 0 0 0 0 27.9417 24.9147 18.6613 33.4492 67.9241 10.3408 32.8099 56.5088 37.5655 0 0 0 c 0 0 0 0 0 19.3003 20.1955 41.1183 36.9671 8.40134 6.20958 9.40019 12.7355 21.0329 0 0 0 g 0 0 0 0 0 28.2225 36.4325 10.6595 13.4641 19.4606 1.50094 5.81668 11.7564 17.923 0 0 0 t 0 0 0 0 0 24.5355 18.4573 29.5609 16.1195 4.21391 81.9487 51.9733 18.9992 23.4785 0 0 0

M00381_2.00_rc_shift6 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M00381_2.00_rc (HOXC5,HOXC6_rc); m=222/246; ncol2=7; w=0; offset=0; strand=R; shift=6; score=0.48743; ------symatwa---- ; cor=; Ncor= a 0 0 0 0 0 0 18.8377 20.1582 28.7464 54.7835 24.6841 27.3022 52.4462 0 0 0 0 c 0 0 0 0 0 0 26.4659 35.6451 33.7342 10.1086 15.8974 17.4087 17.6333 0 0 0 0 g 0 0 0 0 0 0 30.749 17.5247 20.2573 21.187 11.6599 12.8967 14.4369 0 0 0 0 t 0 0 0 0 0 0 23.9474 26.6719 17.2621 13.9209 47.7586 42.3924 15.4837 0 0 0 0

M11491_2.00_shift7 (M11491_2.00)
; positions_6nt_m3 versus M11491_2.00; m=223/246; ncol2=15; w=0; offset=1; strand=D; shift=7; score=0.486301; -------sTATAWAwrs ; cor=; Ncor= a 0 0 0 0 0 0 0 15.6812 4.11311 90.4884 0.771208 91.0026 68.8946 92.545 57.0694 39.8458 14.3959 c 0 0 0 0 0 0 0 37.2751 11.8252 0 2.57069 0 0 0.771208 0.514139 11.3111 34.7044 g 0 0 0 0 0 0 0 39.0746 4.62725 0.514139 0.514139 1.28535 0 5.14139 11.3111 40.3599 38.5604 t 0 0 0 0 0 0 0 7.96915 79.4344 8.99743 96.144 7.71208 31.1054 1.54242 31.1054 8.48329 12.3393

M11388_2.00_shift7 (TBP,TBPL2)
; positions_6nt_m3 versus M11388_2.00 (TBP,TBPL2); m=224/246; ncol2=15; w=0; offset=1; strand=D; shift=7; score=0.486301; -------sTATAWAwrs ; cor=; Ncor= a 0 0 0 0 0 0 0 15.6812 4.11311 90.4884 0.771208 91.0026 68.8946 92.545 57.0694 39.8458 14.3959 c 0 0 0 0 0 0 0 37.2751 11.8252 0 2.57069 0 0 0.771208 0.514139 11.3111 34.7044 g 0 0 0 0 0 0 0 39.0746 4.62725 0.514139 0.514139 1.28535 0 5.14139 11.3111 40.3599 38.5604 t 0 0 0 0 0 0 0 7.96915 79.4344 8.99743 96.144 7.71208 31.1054 1.54242 31.1054 8.48329 12.3393

M09152_2.00_rc_shift3 (CDX2_rc)
; positions_6nt_m3 versus M09152_2.00_rc (CDX2_rc); m=225/246; ncol2=12; w=-3; offset=-3; strand=R; shift=3; score=0.483726; ---amwGCmATaAAa-- ; cor=; Ncor= a 0 0 0 58.2781 31.1258 43.7086 9.27152 0 64.2384 92.7152 0 49.6689 82.7815 80.7947 51.6556 0 0 c 0 0 0 17.2185 35.0993 8.60927 13.245 80.7947 31.1258 1.3245 0.662252 17.2185 6.62252 5.96026 21.1921 0 0 g 0 0 0 23.1788 19.8675 21.1921 76.1589 0.662252 0 5.29801 0.662252 24.5033 0 7.28477 11.9205 0 0 t 0 0 0 1.3245 13.9073 26.4901 1.3245 18.543 4.63576 0.662252 98.6755 8.60927 10.596 5.96026 15.2318 0 0

M09680_2.00_rc_shift7 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M09680_2.00_rc (HOXC5,HOXC6_rc); m=226/246; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.479926; -------ymATTAA--- ; cor=; Ncor= a 0 0 0 0 0 0 0 11.0101 52.4874 97.1591 0.568182 18.3523 87.6515 72.3295 0 0 0 c 0 0 0 0 0 0 0 40.7576 38.1187 0.94697 0.94697 2.72096 3.73737 5.15783 0 0 0 g 0 0 0 0 0 0 0 5.25253 3.95202 1.32576 0.568182 0.852273 1.51515 12.3043 0 0 0 t 0 0 0 0 0 0 0 42.9798 5.44192 0.568182 97.9167 78.0745 7.09596 10.2083 0 0 0

M00216_2.00_rc_shift9 (TBPL2_rc)
; positions_6nt_m3 versus M00216_2.00_rc (TBPL2_rc); m=227/246; ncol2=7; w=0; offset=3; strand=R; shift=9; score=0.478997; ---------wTwwaww- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 48.65 1.44887 63.9678 37.1463 51.5031 40.0342 32.36 0 c 0 0 0 0 0 0 0 0 0 10.4296 19.121 6.94748 9.53399 12.3251 11.2429 17.0632 0 g 0 0 0 0 0 0 0 0 0 11.9969 7.85215 0.0533106 0.0769087 12.3251 11.0202 18.8577 0 t 0 0 0 0 0 0 0 0 0 28.9234 71.578 29.0314 53.2428 23.8466 37.7028 31.7192 0

M07630_2.00_rc_shift7 (ZNF561_rc)
; positions_6nt_m3 versus M07630_2.00_rc (ZNF561_rc); m=228/246; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.477993; -------RCAGAAA--- ; cor=; Ncor= a 0 0 0 0 0 0 0 28.9474 0 100 0 100 100 100 0 0 0 c 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 71.0526 0 0 100 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

M08325_2.00_rc_shift9 (ZNF22_rc)
; positions_6nt_m3 versus M08325_2.00_rc (ZNF22_rc); m=229/246; ncol2=9; w=0; offset=3; strand=R; shift=9; score=0.477463; ---------AAAAAAAA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 c 0 0 0 0 0 0 0 0 0 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 g 0 0 0 0 0 0 0 0 0 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 t 0 0 0 0 0 0 0 0 0 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089

M08306_2.00_rc_shift9 (ZNF384_rc)
; positions_6nt_m3 versus M08306_2.00_rc (ZNF384_rc); m=230/246; ncol2=9; w=0; offset=3; strand=R; shift=9; score=0.477463; ---------AAAAAAAA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 99.7807 99.7807 99.7807 99.7807 99.7807 99.7807 99.7807 99.7807 c 0 0 0 0 0 0 0 0 0 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 g 0 0 0 0 0 0 0 0 0 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 t 0 0 0 0 0 0 0 0 0 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994

M00476_2.00_rc_shift5 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M00476_2.00_rc (HOXC5,HOXC6_rc); m=231/246; ncol2=9; w=-1; offset=-1; strand=R; shift=5; score=0.475873; -----rgymaTwaa--- ; cor=; Ncor= a 0 0 0 0 0 25.3334 23.3437 17.964 32.8483 63.9303 11.9012 29.3243 52.3188 35.524 0 0 0 c 0 0 0 0 0 22.4687 23.8153 38.0298 36.303 10.4625 7.74182 13.1763 13.2946 22.2026 0 0 0 g 0 0 0 0 0 29.7291 34.4782 11.9218 14.0399 19.449 1.57876 6.1621 12.9017 20.2917 0 0 0 t 0 0 0 0 0 22.4687 18.3628 32.0844 16.8088 6.15826 78.7783 51.3373 21.485 21.9817 0 0 0

M00558_2.00_rc_shift5 (HOXC5,HOXC6_rc)
; positions_6nt_m3 versus M00558_2.00_rc (HOXC5,HOXC6_rc); m=232/246; ncol2=9; w=-1; offset=-1; strand=R; shift=5; score=0.472316; -----rgymaTwaa--- ; cor=; Ncor= a 0 0 0 0 0 26.4238 22.0303 15.512 38.5195 66.2171 7.96823 28.2979 60.0023 40.083 0 0 0 c 0 0 0 0 0 19.7719 23.6276 35.574 37.0091 8.35566 8.04831 8.78275 10.2204 20.3067 0 0 0 g 0 0 0 0 0 31.9529 38.184 9.59858 11.259 17.8667 2.08645 3.01256 11.5234 17.8312 0 0 0 t 0 0 0 0 0 21.8514 16.158 39.3154 13.2125 7.56051 81.897 59.9068 18.254 21.7791 0 0 0

M00364_2.00_rc_shift6 (POU3F4_rc)
; positions_6nt_m3 versus M00364_2.00_rc (POU3F4_rc); m=233/246; ncol2=7; w=0; offset=0; strand=R; shift=6; score=0.466669; ------ykmAtwa---- ; cor=; Ncor= a 0 0 0 0 0 0 22.7771 20.2943 38.6696 68.5506 14.8432 36.204 37.593 0 0 0 0 c 0 0 0 0 0 0 25.6811 17.8203 29.2258 5.62697 12.1526 11.4635 15.1321 0 0 0 0 g 0 0 0 0 0 0 17.5623 29.0884 16.6941 17.5942 10.3557 10.2694 22.5745 0 0 0 0 t 0 0 0 0 0 0 33.9795 32.7971 15.4106 8.22823 62.6485 42.0631 24.7004 0 0 0 0

M06204_2.00_shift6 (M06204_2.00)
; positions_6nt_m3 versus M06204_2.00; m=234/246; ncol2=7; w=0; offset=0; strand=D; shift=6; score=0.466396; ------cwGATAA---- ; cor=; Ncor= a 0 0 0 0 0 0 11.7647 58.8235 0 100 5.88235 100 100 0 0 0 0 c 0 0 0 0 0 0 52.9412 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 17.6471 0 100 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 17.6471 41.1765 0 0 94.1176 0 0 0 0 0 0

M00499_2.00_rc_shift6 (DBX1,DBX2,HLX_rc)
; positions_6nt_m3 versus M00499_2.00_rc (DBX1,DBX2,HLX_rc); m=235/246; ncol2=7; w=0; offset=0; strand=R; shift=6; score=0.458328; ------byaatwa---- ; cor=; Ncor= a 0 0 0 0 0 0 18.0902 17.5178 38.8597 66.7958 21.3722 30.0299 48.6211 0 0 0 0 c 0 0 0 0 0 0 25.4159 36.3509 20.4904 13.0873 14.7625 16.8137 14.9402 0 0 0 0 g 0 0 0 0 0 0 29.2352 13.2397 24.5315 5.93959 8.60284 18.9574 15.8641 0 0 0 0 t 0 0 0 0 0 0 27.2587 32.8916 16.1183 14.1773 55.2624 34.1989 20.5746 0 0 0 0

M06250_2.00_rc_shift7 (DBX1,DBX2,HLX_rc)
; positions_6nt_m3 versus M06250_2.00_rc (DBX1,DBX2,HLX_rc); m=236/246; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.457708; -------ThWwwwA--- ; cor=; Ncor= a 0 0 0 0 0 0 0 6.25 43.75 75 34.375 40.625 65.625 75 0 0 0 c 0 0 0 0 0 0 0 21.875 28.125 0 0 3.125 0 9.375 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 3.125 3.125 0 0 0 t 0 0 0 0 0 0 0 71.875 28.125 25 65.625 56.25 31.25 12.5 0 0 0

M05895_2.00_shift9 (LEF1)
; positions_6nt_m3 versus M05895_2.00 (LEF1); m=237/246; ncol2=10; w=0; offset=3; strand=D; shift=9; score=0.454368; ---------WTCAAAGg ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 74.3 3.2 4.6 98.4 98.5 96.3 8.8 23.2 c 0 0 0 0 0 0 0 0 0 0.3 0.5 84.9 0.2 0.5 0.6 12.9 18.9 g 0 0 0 0 0 0 0 0 0 0.3 0.2 8.7 0.2 0.4 1.8 77.3 44.6 t 0 0 0 0 0 0 0 0 0 25 96.2 1.8 1.2 0.6 1.3 0.9 13.4

M02651_2.00_shift9 (ARID3B,ARID3C)
; positions_6nt_m3 versus M02651_2.00 (ARID3B,ARID3C); m=238/246; ncol2=6; w=0; offset=3; strand=D; shift=9; score=0.451339; ---------ATyAAA-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 100 0 3.7037 100 100 74.0741 0 0 c 0 0 0 0 0 0 0 0 0 0 0 33.3333 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.7037 0 0 t 0 0 0 0 0 0 0 0 0 0 100 62.963 0 0 22.2222 0 0

M02062_2.00_rc_shift4 (HOXC6_rc)
; positions_6nt_m3 versus M02062_2.00_rc (HOXC6_rc); m=239/246; ncol2=10; w=-2; offset=-2; strand=R; shift=4; score=0.448858; ----arsymaTwaa--- ; cor=; Ncor= a 0 0 0 0 34.894 27.1678 19.9656 19.6534 37.9105 67.6567 8.70565 25.9487 62.4437 41.4612 0 0 0 c 0 0 0 0 17.8556 20.533 37.4876 36.9015 41.8976 8.70978 6.7125 11.2023 11.1816 19.1971 0 0 0 g 0 0 0 0 23.6252 27.7167 28.6173 7.99049 6.92562 15.0962 6.01329 3.3405 11.873 16.3587 0 0 0 t 0 0 0 0 23.6252 24.5825 13.9295 35.4546 13.2663 8.53731 78.5686 59.5085 14.5017 22.9831 0 0 0

M06538_2.00_rc_shift7 (OTP,SEBOX_rc)
; positions_6nt_m3 versus M06538_2.00_rc (OTP,SEBOX_rc); m=240/246; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.448541; -------yAATwAw--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 80 100 0 56.6667 73.3333 43.3333 0 0 0 c 0 0 0 0 0 0 0 50 20 0 0 0 0 10 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 3.33333 6.66667 0 0 0 t 0 0 0 0 0 0 0 50 0 0 100 43.3333 23.3333 40 0 0 0

M10845_2.00_rc_shift3 (POU3F2_rc)
; positions_6nt_m3 versus M10845_2.00_rc (POU3F2_rc); m=241/246; ncol2=10; w=-3; offset=-3; strand=R; shift=3; score=0.439467; ---ATTArCATAA---- ; cor=; Ncor= a 0 0 0 100 0 0 100 57.1429 0 100 0 100 85.7143 0 0 0 0 c 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 42.8571 0 0 0 0 0 0 0 0 0 t 0 0 0 0 100 100 0 0 0 0 100 0 14.2857 0 0 0 0

M08396_2.00_rc_shift0 (ZNF350_rc)
; positions_6nt_m3 versus M08396_2.00_rc (ZNF350_rc); m=242/246; ncol2=21; w=-6; offset=-6; strand=R; shift=0; score=0.433273; rgkykgrkyawAAAArr ; cor=; Ncor= a 26.4469 17.4437 19.0514 3.93891 20.6592 20.6592 25.1608 9.72669 20.6592 66.6399 30.9486 78.8585 93.6495 99.7588 89.1479 36.7363 44.7749 c 15.5145 9.0836 15.1929 29.6624 12.299 15.836 13.2637 4.26045 42.2026 13.9068 11.3344 10.6913 4.26045 0.0803859 1.36656 1.36656 2.65273 g 35.4502 56.3505 35.7717 22.2669 25.8039 57.3151 59.5659 28.0547 8.11897 4.90354 8.76206 1.04502 2.00965 0.0803859 8.44051 57.6367 43.4887 t 22.5884 17.1222 29.9839 44.1318 41.2379 6.18971 2.00965 57.9582 29.0193 14.5498 48.955 9.40514 0.0803859 0.0803859 1.04502 4.26045 9.0836

M07738_2.00_rc_shift9 (ZNF649_rc)
; positions_6nt_m3 versus M07738_2.00_rc (ZNF649_rc); m=243/246; ncol2=6; w=0; offset=3; strand=R; shift=9; score=0.416653; ---------ATATAA-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 99.8454 0.0515464 99.8454 0.0515464 99.8454 99.8454 0 0 c 0 0 0 0 0 0 0 0 0 0.0515464 0.0515464 0.0515464 0.0515464 0.0515464 0.0515464 0 0 g 0 0 0 0 0 0 0 0 0 0.0515464 0.0515464 0.0515464 0.0515464 0.0515464 0.0515464 0 0 t 0 0 0 0 0 0 0 0 0 0.0515464 99.8454 0.0515464 99.8454 0.0515464 0.0515464 0 0

M10832_2.00_rc_shift2 (POU2F1_rc)
; positions_6nt_m3 versus M10832_2.00_rc (POU2F1_rc); m=244/246; ncol2=12; w=-4; offset=-4; strand=R; shift=2; score=0.41471; --AATTAvCATAsa--- ; cor=; Ncor= a 0 0 100 100 0 0 76 28.2828 5 100 0 88.1188 22 58.9474 0 0 0 c 0 0 0 0 0 0 0 32.3232 95 0 0 0 28 11.5789 0 0 0 g 0 0 0 0 0 0 0 39.3939 0 0 0 5.94059 28 6.31579 0 0 0 t 0 0 0 0 100 100 24 0 0 0 100 5.94059 22 23.1579 0 0 0

M07646_2.00_rc_shift10 (ZNF613_rc)
; positions_6nt_m3 versus M07646_2.00_rc (ZNF613_rc); m=245/246; ncol2=9; w=0; offset=4; strand=R; shift=10; score=0.411276; ----------WAAAAAA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 74.5082 99.7541 96.1475 90.5738 97.7869 78.1148 94.5082 c 0 0 0 0 0 0 0 0 0 0 0.0819672 0.0819672 0.0819672 0.0819672 0.0819672 21.7213 0.0819672 g 0 0 0 0 0 0 0 0 0 0 0.0819672 0.0819672 0.0819672 5.65574 2.04918 0.0819672 1.06557 t 0 0 0 0 0 0 0 0 0 0 25.3279 0.0819672 3.68852 3.68852 0.0819672 0.0819672 4.34426

M08236_2.00_rc_shift11 (MZF1_rc)
; positions_6nt_m3 versus M08236_2.00_rc (MZF1_rc); m=246/246; ncol2=7; w=0; offset=5; strand=R; shift=11; score=0.400374; -----------AAAATG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 100 100 100 100 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv4_m3_shift8 ; 202 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv4_m3_shift8 (oligos_6nt_mkv4_m3)
; oligos_6nt_mkv4_m3; m=0 (reference); ncol1=13; shift=8; ncol=21; --------csCGCCCCCACcc ; Alignment reference a 0 0 0 0 0 0 0 0 1576 2156 384 1029 167 498 343 619 106 9548 586 2335 1412 c 0 0 0 0 0 0 0 0 5711 5219 10748 385 11275 10294 10498 10390 11296 258 8885 4991 5491 g 0 0 0 0 0 0 0 0 2970 3198 451 9472 258 917 855 736 403 1373 1599 2868 2704 t 0 0 0 0 0 0 0 0 1696 1380 370 1067 253 244 257 208 148 774 883 1759 2346

M04438_2.00_shift8 (EGR1)
; oligos_6nt_mkv4_m3 versus M04438_2.00 (EGR1); m=1/201; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.847443; --------cmCrCCCmCgcmc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.812 28.5357 7.63283 29.7004 2.48685 4.75973 4.16748 54.8634 0.170648 22.7166 8.27459 31.8616 19.8425 c 0 0 0 0 0 0 0 0 41.1735 47.1176 78.0531 7.48997 94.1416 90.0915 77.0299 32.5111 95.9776 13.8829 66.0792 31.813 44.6646 g 0 0 0 0 0 0 0 0 16.2306 10.4727 2.55749 46.4378 0.908656 2.746 4.40227 6.24303 0 42.2063 8.17388 21.4782 14.6341 t 0 0 0 0 0 0 0 0 22.7838 13.8739 11.7565 16.3718 2.46294 2.40275 14.4003 6.38239 3.85178 21.1943 17.4723 14.8472 20.8587

M04437_2.00_shift8 (EGR1)
; oligos_6nt_mkv4_m3 versus M04437_2.00 (EGR1); m=2/201; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.815231; --------cmCrCCCmCgCmm ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.713 33.137 9.66458 31.2385 1.54779 2.98439 5.56261 59.4771 0.032352 17.4956 7.29218 36.6286 25.5986 c 0 0 0 0 0 0 0 0 39.8983 41.6636 73.5642 8.67825 97.2874 93.3119 77.4321 33.5479 98.625 13.0649 74.9754 25.5198 40.7019 g 0 0 0 0 0 0 0 0 15.8413 12.5506 6.11728 48.8111 0.191479 1.72942 1.0414 4.23373 0.210288 60.1638 5.01722 21.9221 15.2345 t 0 0 0 0 0 0 0 0 19.5474 12.6488 10.654 11.2721 0.973352 1.97429 15.9639 2.7412 1.13232 9.27571 12.7152 15.9295 18.4651

M08996_2.00_shift7 (M08996_2.00)
; oligos_6nt_mkv4_m3 versus M08996_2.00; m=3/201; ncol2=14; w=-1; offset=-1; strand=D; shift=7; score= 0.8036; -------cyCCgCCCmCgCmc ; cor=; Ncor= a 0 0 0 0 0 0 0 10.5691 10.3659 16.8699 0.406504 23.9837 0 0.609756 0 44.9187 1.01626 16.2602 1.42276 35.1626 10.7724 c 0 0 0 0 0 0 0 57.7236 54.878 77.8455 98.9837 0 100 98.9837 96.3415 54.4715 98.7805 1.21951 89.6341 33.9431 47.1545 g 0 0 0 0 0 0 0 9.7561 8.53659 2.84553 0.609756 61.1789 0 0.406504 0.203252 0.203252 0 67.0732 3.86179 17.2764 19.3089 t 0 0 0 0 0 0 0 21.9512 26.2195 2.43902 0 14.8374 0 0 3.45528 0.406504 0.203252 15.4472 5.0813 13.6179 22.7642

M04462_2.00_shift8 (EGR4)
; oligos_6nt_mkv4_m3 versus M04462_2.00 (EGR4); m=4/201; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.798302; --------ymCGCCCMCGCac ; cor=; Ncor= a 0 0 0 0 0 0 0 0 18.605 38.9584 0.633624 9.8065 0 0.0572574 0 72.8326 0 16.0613 1.10299 57.2542 24.1513 c 0 0 0 0 0 0 0 0 42.2801 56.974 98.2963 0.322504 99.7999 99.9284 95.7088 25.7694 99.9857 1.82149 89.5344 14.9184 45.2371 g 0 0 0 0 0 0 0 0 10.169 1.09935 0 83.3851 0.0428878 0 0.205648 1.14763 0.0143225 74.7991 2.70617 22.6933 8.738 t 0 0 0 0 0 0 0 0 28.9459 2.96826 1.07012 6.48591 0.157255 0.0143143 4.08555 0.250391 0 7.31812 6.65641 5.13409 21.8737

M06072_2.00_shift7 (M06072_2.00)
; oligos_6nt_mkv4_m3 versus M06072_2.00; m=5/201; ncol2=14; w=-1; offset=-1; strand=D; shift=7; score=0.778405; -------hmmCGCCCmCvymm ; cor=; Ncor= a 0 0 0 0 0 0 0 27.7778 26.3158 47.3684 10.5263 15.7895 0 0 0 57.8947 0 31.5789 10.5263 57.8947 26.3158 c 0 0 0 0 0 0 0 44.4444 47.3684 47.3684 84.2105 0 100 94.7368 100 36.8421 100 26.3158 52.6316 26.3158 47.3684 g 0 0 0 0 0 0 0 0 21.0526 5.26316 0 73.6842 0 5.26316 0 0 0 42.1053 5.26316 5.26316 5.26316 t 0 0 0 0 0 0 0 27.7778 5.26316 0 5.26316 10.5263 0 0 0 5.26316 0 0 31.5789 10.5263 21.0526

M06073_2.00_shift7 (M06073_2.00)
; oligos_6nt_mkv4_m3 versus M06073_2.00; m=6/201; ncol2=14; w=-1; offset=-1; strand=D; shift=7; score=0.766348; -------mcmCrCCCmCrcmm ; cor=; Ncor= a 0 0 0 0 0 0 0 27.4252 23.9949 36.4842 8.51155 32.763 1.62532 0 1.66809 67.408 0.342173 30.8811 15.6544 40.3372 25.6059 c 0 0 0 0 0 0 0 32.4569 37.3824 47.6476 81.9076 3.89222 98.3747 100 83.2763 29.8118 99.6578 13.6869 59.0248 25.4215 38.9118 g 0 0 0 0 0 0 0 20.8976 15.0128 6.97177 3.84944 51.0693 0 0 0 0.25663 0 46.1078 9.83747 20.882 15.5464 t 0 0 0 0 0 0 0 19.2203 23.6099 8.89649 5.73139 12.2754 0 0 15.0556 2.52352 0 9.32421 15.4833 13.3593 19.936

M04439_2.00_shift8 (EGR2)
; oligos_6nt_mkv4_m3 versus M04439_2.00 (EGR2); m=7/201; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.756084; --------mmCrCCCACGCac ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.001 40.4671 0.527831 25.1462 0 0.202327 1.18203 86.007 0 15.5957 0.790861 41.8363 23.923 c 0 0 0 0 0 0 0 0 40.446 43.3121 94.6737 1.00715 99.7472 99.7977 77.7384 13.8187 99.8482 2.85199 86.6872 18.8507 39.7364 g 0 0 0 0 0 0 0 0 12.367 5.64756 1.53551 64.1001 0.252781 0 0.197006 0.174368 0 71.2274 1.53779 23.4097 14.9518 t 0 0 0 0 0 0 0 0 21.186 10.5732 3.26296 9.74659 0 0 20.8826 0 0.151822 10.3249 10.9842 15.9033 21.3887

M04440_2.00_shift8 (EGR2)
; oligos_6nt_mkv4_m3 versus M04440_2.00 (EGR2); m=8/201; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.745837; --------hmCGCCCACrCrm ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.0908 42.3604 0.683956 12.222 0.346821 0.318011 0.110865 98.7931 0.0290782 27.4909 0.983757 56.8829 27.4287 c 0 0 0 0 0 0 0 0 30.7155 51.7798 97.9766 0.342215 99.3642 99.3929 95.2882 1.2069 99.9709 0.138145 78.6548 7.85903 35.8639 g 0 0 0 0 0 0 0 0 14.6015 1.80723 0.427472 84.0381 0.0289017 0 0.332594 0 0 59.368 6.17708 29.7981 12.9727 t 0 0 0 0 0 0 0 0 28.5922 4.05257 0.911941 3.3977 0.260116 0.289101 4.26829 0 0 13.0029 14.1844 5.45996 23.7347

M08317_2.00_shift6 (KLF10)
; oligos_6nt_mkv4_m3 versus M08317_2.00 (KLF10); m=9/201; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score=0.737697; ------gcCmCRCCCCCyscc ; cor=; Ncor= a 0 0 0 0 0 0 5.6645 19.1721 3.9216 45.098 0 29.1939 0 0.2179 0.2179 19.1721 4.5752 16.5577 11.5468 11.5468 13.9434 c 0 0 0 0 0 0 17.8649 64.2702 87.3638 47.4946 94.5534 0 100 99.7821 89.3246 69.0632 69.281 28.976 38.9978 59.0414 49.4553 g 0 0 0 0 0 0 66.2309 6.5359 1.3072 7.4074 4.5752 68.8453 0 0 0 0.6536 4.793 23.3115 27.6688 20.0436 22.0044 t 0 0 0 0 0 0 10.2397 10.0218 7.4074 0 0.8715 1.9608 0 0 10.4575 11.1111 21.3508 31.1547 21.7865 9.3682 14.5969

M07928_2.00_shift7 (EGR1)
; oligos_6nt_mkv4_m3 versus M07928_2.00 (EGR1); m=10/201; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.736736; -------yyCCGCCCmCGCmc ; cor=; Ncor= a 0 0 0 0 0 0 0 10.2828 13.8817 14.91 0.7712 7.455 0 0 0 37.018 0 3.856 0.2571 33.419 10.2828 c 0 0 0 0 0 0 0 46.7866 40.1028 76.3496 98.7147 0 100 100 94.0874 61.9537 100 0 93.3162 28.5347 47.0437 g 0 0 0 0 0 0 0 17.7378 19.7943 2.5707 0 88.1748 0 0 0 1.0283 0 88.689 1.7995 22.108 23.1362 t 0 0 0 0 0 0 0 25.1928 26.2211 6.1697 0.5141 4.3702 0 0 5.9126 0 0 7.45501 4.6272 15.9383 19.5373

M04584_2.00_shift8 (EGR3)
; oligos_6nt_mkv4_m3 versus M04584_2.00 (EGR3); m=11/201; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.730486; --------hmCGCCCACGCRh ; cor=; Ncor= a 0 0 0 0 0 0 0 0 29.6397 41.0368 0 1.7082 0.269654 0.041632 0.100806 97.2458 0.207727 18.6845 0.38088 69.4734 30.1187 c 0 0 0 0 0 0 0 0 30.5978 58.1371 99.6472 0.542605 99.6059 99.9584 96.8145 2.7339 99.7507 0.832974 91.4492 2.53183 35.6176 g 0 0 0 0 0 0 0 0 13.5597 0.0413052 0.124507 96.5032 0.0829703 0 0.120968 0.0202511 0.0415455 68.9645 3.10417 25.6944 7.72756 t 0 0 0 0 0 0 0 0 26.2029 0.7848 0.228263 1.24598 0.0414852 0 2.96371 0 0 11.518 5.0657 2.30035 26.5361

M09515_2.00_shift8 (M09515_2.00)
; oligos_6nt_mkv4_m3 versus M09515_2.00; m=12/201; ncol2=12; w=0; offset=0; strand=D; shift=8; score=0.729962; --------cmCrCCCACrca- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.4 32.9 1.4 25.3 0.1 0.1 0.1 86.1 0.1 25.5 2.6 32.2 0 c 0 0 0 0 0 0 0 0 35.7 51.3 95.3 0.1 99.7 99.7 94.3 13.7 99.7 3.5 67.8 23.1 0 g 0 0 0 0 0 0 0 0 19.2 6.6 0.1 58.7 0.1 0.1 0.1 0.1 0.1 55.2 18.2 23.1 0 t 0 0 0 0 0 0 0 0 24.8 9.2 3.2 15.9 0.1 0.1 5.5 0.1 0.1 15.8 11.4 21.6 0

M04461_2.00_shift8 (EGR4)
; oligos_6nt_mkv4_m3 versus M04461_2.00 (EGR4); m=13/201; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.728939; --------cmCGCCCACGCAm ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.0333 44.0628 0.720243 5.48356 0 0 0.120126 83.4085 0.154172 3.15973 0.132363 72.7656 29.7605 c 0 0 0 0 0 0 0 0 45.2245 51.0423 98.1425 0.343824 99.9614 99.8169 95.694 16.2371 99.788 0.597042 97.9106 8.1928 39.0498 g 0 0 0 0 0 0 0 0 8.91357 1.65304 0.15163 91.2986 0 0.115663 0.0646831 0.209407 0.0192715 95.1226 0.264725 13.9896 9.72383 t 0 0 0 0 0 0 0 0 24.8286 3.2418 0.985595 2.87402 0.03861 0.0674699 4.12123 0.144974 0.0385431 1.1206 1.69235 5.052 21.4658

M08999_2.00_shift7 (M08999_2.00)
; oligos_6nt_mkv4_m3 versus M08999_2.00; m=14/201; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.716179; -------CCCCTCCCCCaccc ; cor=; Ncor= a 0 0 0 0 0 0 0 1.8 1 0 8.4 16.6 0 0 0 0 0 62.8 18.4 8.4 9.8 c 0 0 0 0 0 0 0 95.8 98.6 99.8 86.6 0.4 100 100 98.8 99.2 100 23.6 61.6 67.4 60 g 0 0 0 0 0 0 0 0.6 0 0 0 3.8 0 0 0 0 0 2.8 6.8 10.6 16 t 0 0 0 0 0 0 0 1.8 0.4 0.2 5 79.2 0 0 1.2 0.8 0 10.8 13.2 13.6 14.2

M04583_2.00_shift8 (EGR3)
; oligos_6nt_mkv4_m3 versus M04583_2.00 (EGR3); m=15/201; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.703584; --------mmCGCCCACGCam ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.6547 52.8347 0.0796766 5.49078 0.0943341 0.170885 0.075841 92.8765 0.208989 4.05723 0.12021 62.8749 26.3763 c 0 0 0 0 0 0 0 0 37.4878 45.5584 99.9203 0.319454 99.8172 99.7614 82.8379 7.107 99.6674 0.331428 96.9118 9.8676 38.6503 g 0 0 0 0 0 0 0 0 11.9702 0.168541 0 92.4505 0.0619067 0.0530332 0.0171254 0 0.0677008 93.5178 0 17.1504 11.7041 t 0 0 0 0 0 0 0 0 23.8873 1.43841 0 1.73925 0.0265315 0.0147314 17.0691 0.0164577 0.0559268 2.09352 2.96803 10.1071 23.2693

M08025_2.00_shift7 (M08025_2.00)
; oligos_6nt_mkv4_m3 versus M08025_2.00; m=16/201; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.703293; -------CCCCTCCCCCmcCy ; cor=; Ncor= a 0 0 0 0 0 0 0 2.8571 0 0 6.66669 22.8571 0 0.9524 0.9524 3.8095 5.7143 59.0477 24.7619 6.66669 16.1905 c 0 0 0 0 0 0 0 94.2857 82.8571 100 80.9523 0.9524 100 98.0952 93.3333 93.3333 94.2857 27.619 45.7143 68.5713 40.9524 g 0 0 0 0 0 0 0 1.9048 0 0 0 4.7619 0 0 0.9524 0.9524 0 2.8571 17.1429 12.381 9.5238 t 0 0 0 0 0 0 0 0.9524 17.1429 0 12.381 71.4286 0 0.9524 4.7619 1.9048 0 10.4762 12.381 12.381 33.3333

M08906_2.00_shift6 (ZNF281)
; oligos_6nt_mkv4_m3 versus M08906_2.00 (ZNF281); m=17/201; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score=0.702313; ------yCCCCTCCCCCwccc ; cor=; Ncor= a 0 0 0 0 0 0 9.12863 2.48963 1.65975 1.03734 12.8631 12.6556 0.414938 0.622407 0.622407 1.65975 1.03734 47.0954 14.1079 10.3734 13.278 c 0 0 0 0 0 0 27.1784 87.3444 94.1909 97.9253 74.0664 0.207469 96.473 97.9253 89.6266 97.5104 96.888 17.4274 50.8299 60.3734 45.8506 g 0 0 0 0 0 0 24.8963 1.65975 0.622407 0 0.207469 10.9959 0.414938 0.414938 1.65975 0.414938 0.829876 7.67635 18.0498 8.92116 17.8423 t 0 0 0 0 0 0 38.7967 8.50622 3.52697 1.03734 12.8631 76.1411 2.6971 1.03734 8.09129 0.414938 1.24481 27.8008 17.0124 20.332 23.029

M05860_2.00_shift7 (M05860_2.00)
; oligos_6nt_mkv4_m3 versus M05860_2.00; m=18/201; ncol2=13; w=-1; offset=-1; strand=D; shift=7; score=0.701754; -------cymCGCCCmCGCa- ; cor=; Ncor= a 0 0 0 0 0 0 0 22.4 21 32.6 1 22.2 0.1 0.1 0.1 64.5 0.1 12.8 3.5 41 0 c 0 0 0 0 0 0 0 32.3 31.8 51.5 93.5 0.7 99.7 99.8 92.1 35.1 99.8 3.2 71.6 22.3 0 g 0 0 0 0 0 0 0 22.9 19.3 8.6 0.9 69.5 0.1 0.1 0.1 0.2 0.1 71 7.5 22.2 0 t 0 0 0 0 0 0 0 22.4 27.9 7.3 4.6 7.6 0.1 0.1 7.7 0.1 0.1 13.1 17.5 14.5 0

M08092_2.00_shift6 (SP2)
; oligos_6nt_mkv4_m3 versus M08092_2.00 (SP2); m=19/201; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score=0.692365; ------gyCCCGCCyCyyccs ; cor=; Ncor= a 0 0 0 0 0 0 9.48992 2.31317 3.08422 0 0 10.3203 0 0 0 12.2183 6.82088 11.0913 13.4045 13.5231 12.0403 c 0 0 0 0 0 0 15.0059 48.102 82.2064 99.5848 97.4496 0 100 98.2206 65.7177 70.9371 57.5919 32.8588 42.5267 47.0937 44.1874 g 0 0 0 0 0 0 60.9727 15.2432 0.059312 0.415184 0 75.9193 0 0 0 0 5.87189 19.2764 23.7841 24.1993 25.0297 t 0 0 0 0 0 0 14.5314 34.3416 14.6501 0 2.55042 13.7604 0 1.77936 34.2823 16.8446 29.7153 36.7734 20.2847 15.1839 18.7426

M02883_2.00_shift8 (EGR1)
; oligos_6nt_mkv4_m3 versus M02883_2.00 (EGR1); m=20/201; ncol2=14; w=0; offset=0; strand=D; shift=8; score=0.692187; --------tmCGCCCmCGCAw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.9478 51.3906 0.322373 10.5203 0 0.260417 0 65.2638 0.325309 1.90616 1 68.0894 27.9057 c 0 0 0 0 0 0 0 0 24.1127 39.5405 96.9697 0.535578 98.0026 99.2839 92.8215 34.3593 99.5446 1.13636 93.8125 6.91057 24.8527 g 0 0 0 0 0 0 0 0 15.3967 3.62757 0.773694 85.4246 0.773196 0 0.93633 0 0 93.1818 1.1875 14.2276 12.5335 t 0 0 0 0 0 0 0 0 35.5428 5.44135 1.93424 3.51951 1.22423 0.455729 6.2422 0.376884 0.130124 3.77566 4 10.7724 34.7081

M04511_2.00_shift8 (KLF15)
; oligos_6nt_mkv4_m3 versus M04511_2.00 (KLF15); m=21/201; ncol2=12; w=0; offset=0; strand=D; shift=8; score=0.686012; --------vccmCgCCCmcc- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 29.0396 21.2916 15.9457 54.3609 0 19.6352 0.665188 3.79702 1.63279 36.4374 11.0315 17.5305 0 c 0 0 0 0 0 0 0 0 25.3811 52.9566 65.996 34.7006 96.8981 23.1277 96.9697 93.1157 87.4375 48.7021 64.9423 48.3232 0 g 0 0 0 0 0 0 0 0 34.4893 12.1695 5.5332 3.43899 0 50.9119 0.406504 2.37757 2.53249 4.34783 7.1985 12.5381 0 t 0 0 0 0 0 0 0 0 11.0899 13.5822 12.5252 7.49948 3.10192 6.32518 1.95861 0.709723 8.3972 10.5127 16.8277 21.6082 0

M00249_2.00_shift9 (WT1)
; oligos_6nt_mkv4_m3 versus M00249_2.00 (WT1); m=22/201; ncol2=11; w=0; offset=1; strand=D; shift=9; score=0.683185; ---------mCyCCCCCrca- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.7654 9.76681 2.48942 0.022935 0.022935 0.022935 9.70563 0.022935 25.8716 15.2561 32.3995 0 c 0 0 0 0 0 0 0 0 0 29.4673 70.6996 32.473 99.9312 99.9312 99.9312 90.2485 99.9312 15.4144 54.2316 22.5335 0 g 0 0 0 0 0 0 0 0 0 19.8837 9.76681 2.48942 0.022935 0.022935 0.022935 0.022935 0.022935 53.5748 15.2561 22.5335 0 t 0 0 0 0 0 0 0 0 0 19.8837 9.76681 62.5481 0.022935 0.022935 0.022935 0.022935 0.022935 5.13927 15.2561 22.5335 0

M08358_2.00_shift8 (ZNF467)
; oligos_6nt_mkv4_m3 versus M08358_2.00 (ZNF467); m=23/201; ncol2=12; w=0; offset=0; strand=D; shift=8; score=0.669286; --------CCCTCCCCCyCC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1.11257 0.850785 0.065445 0.065445 0.065445 1.37435 0.065445 0.065445 1.37435 18.6518 2.94503 0.065445 0 c 0 0 0 0 0 0 0 0 74.411 87.7618 99.8037 0.065445 85.6675 93.5209 89.3325 84.3586 73.6257 34.8822 79.6466 92.7356 0 g 0 0 0 0 0 0 0 0 4.25393 0.065445 0.065445 0.850785 3.46859 0.065445 1.11257 0.065445 1.63613 10.2749 5.03927 0.065445 0 t 0 0 0 0 0 0 0 0 20.2225 11.322 0.065445 99.0183 10.7984 5.03927 9.48953 15.5105 23.3639 36.1911 12.3691 7.13351 0

M08994_2.00_shift6 (M08994_2.00)
; oligos_6nt_mkv4_m3 versus M08994_2.00; m=24/201; ncol2=14; w=-2; offset=-2; strand=D; shift=6; score=0.666687; ------ccyCCrCCCMCrCm- ; cor=; Ncor= a 0 0 0 0 0 0 10.6 17.6 11 19 3.2 32 0 1 0.8 68.2 1.8 31.2 4.4 30.2 0 c 0 0 0 0 0 0 50 52.8 54.2 73 92.4 1.4 98 98.4 92.6 29.6 95 6.8 72.8 41.8 0 g 0 0 0 0 0 0 17 10.8 9.6 0.8 1.6 41.8 1.8 0.4 0.4 1.4 1.2 39.8 13.4 14.2 0 t 0 0 0 0 0 0 22.4 18.8 25.2 7.2 2.8 24.8 0.2 0.2 6.2 0.8 2 22.2 9.4 13.8 0

M00133_2.00_shift8 (M00133_2.00)
; oligos_6nt_mkv4_m3 versus M00133_2.00; m=25/201; ncol2=10; w=0; offset=0; strand=D; shift=8; score=0.660163; --------cmCgCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.0214 42.3407 2.97602 15.6909 0.0767376 0.0263797 0.0433909 29.6789 10.202 20.7575 0 0 0 c 0 0 0 0 0 0 0 0 45.8577 50.1866 90.9753 1.40928 98.7545 99.967 83.3039 56.2855 54.1945 29.7523 0 0 0 g 0 0 0 0 0 0 0 0 11.8882 2.87413 2.48578 66.892 0.00389772 0.00304224 0.00127157 1.35045 11.9721 14.923 0 0 0 t 0 0 0 0 0 0 0 0 21.2327 4.59858 3.56295 16.0079 1.1649 0 16.6514 12.6852 23.6315 34.5672 0 0 0

M09008_2.00_shift8 (M09008_2.00)
; oligos_6nt_mkv4_m3 versus M09008_2.00; m=26/201; ncol2=14; w=0; offset=0; strand=D; shift=8; score=0.651201; --------cccrgCCmCrCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 17.1806 16.0793 24.0088 28.6344 12.7753 5.06608 5.28634 47.3568 0.660793 45.1542 0.220264 0 1.10132 c 0 0 0 0 0 0 0 0 64.3172 62.1145 53.304 13.4361 15.859 91.1894 91.1894 49.3392 98.4581 0.220264 99.1189 99.1189 98.4581 g 0 0 0 0 0 0 0 0 11.2335 17.1806 12.7753 40.0881 64.5374 1.76211 0.660793 0.881057 0 43.6123 0 0.440529 0 t 0 0 0 0 0 0 0 0 7.26872 4.62555 9.91189 17.8414 6.82819 1.98238 2.86344 2.42291 0.881057 11.0132 0.660793 0.440529 0.440529

M08868_2.00_shift8 (KLF5)
; oligos_6nt_mkv4_m3 versus M08868_2.00 (KLF5); m=27/201; ncol2=14; w=0; offset=0; strand=D; shift=8; score=0.651174; --------cccagCCmCaCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 14.8 22 15.4 37.8 15 9 2 40.6 1 63 1 1.6 0.6 c 0 0 0 0 0 0 0 0 49.4 50.2 60.6 19.2 11 83 96.4 54.4 94.2 0.8 93 96.8 94.4 g 0 0 0 0 0 0 0 0 21 12.4 13.6 18.2 63.4 3 0 1 0.2 18.4 3.6 0.8 0.4 t 0 0 0 0 0 0 0 0 14.8 15.4 10.4 24.8 10.6 5 1.6 4 4.6 17.8 2.4 0.8 4.6

M00765_2.00_shift8 (M00765_2.00)
; oligos_6nt_mkv4_m3 versus M00765_2.00; m=28/201; ncol2=9; w=0; offset=0; strand=D; shift=8; score=0.648184; --------cmCGCCCMc---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 17.435 41.7838 0.00455751 0.00455751 0.00455751 0.00455751 0.00455751 30.5774 7.56959 0 0 0 0 c 0 0 0 0 0 0 0 0 47.6951 58.2071 99.9863 8.49137 99.9863 91.4995 99.9863 69.4134 59.8878 0 0 0 0 g 0 0 0 0 0 0 0 0 17.435 0.00455751 0.00455751 91.4995 0.00455751 8.49137 0.00455751 0.00455751 7.56959 0 0 0 0 t 0 0 0 0 0 0 0 0 17.435 0 0 0 0 0 0 0 24.973 0 0 0 0

M02892_2.00_shift9 (ZNF740)
; oligos_6nt_mkv4_m3 versus M02892_2.00 (ZNF740); m=29/201; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.645389; ---------cCCCCCCCAc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 19.8051 2.29439 1.13194 1.38249 5.04422 0.612944 0.899119 1.61807 72.652 7.5187 0 0 c 0 0 0 0 0 0 0 0 0 57.0798 95.976 96.1797 96.3843 89.0599 98.035 97.7882 91.6568 7.02739 67.8055 0 0 g 0 0 0 0 0 0 0 0 0 16.0537 0.352983 1.04351 1.08118 2.86603 0.757166 0.143859 1.1967 7.08083 3.35411 0 0 t 0 0 0 0 0 0 0 0 0 7.06142 1.37663 1.64485 1.15207 3.02981 0.594916 1.16885 5.5284 13.2398 21.3217 0 0

M02891_2.00_shift9 (ZNF740)
; oligos_6nt_mkv4_m3 versus M02891_2.00 (ZNF740); m=30/201; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.642299; ---------mCCCCCCCAc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 27.3826 7.78087 6.20484 0.948509 0.902527 0.361991 2.33996 4.5264 68.0266 12.4568 0 0 c 0 0 0 0 0 0 0 0 0 46.2576 85.391 91.4152 97.1545 97.0668 97.3303 94.9669 90.1509 18.5642 61.8815 0 0 g 0 0 0 0 0 0 0 0 0 17.7592 1.07185 0.297493 0.361337 0.541516 0.950226 1.6777 0.963956 3.60531 5.29344 0 0 t 0 0 0 0 0 0 0 0 0 8.60065 5.75625 2.08245 1.53568 1.48917 1.35747 1.01545 4.35876 9.80392 20.3682 0 0

M08882_2.00_shift6 (EGR1)
; oligos_6nt_mkv4_m3 versus M08882_2.00 (EGR1); m=31/201; ncol2=17; w=-2; offset=-2; strand=D; shift=6; score=0.641554; ------yyyCCrCCCmCgCmy ; cor=; Ncor= a 0 0 0 0 0 0 11.8 15 12.8 17.2 6 30 1.4 2.2 1.4 55.4 4 21.2 5 29.8 8.2 c 0 0 0 0 0 0 43.6 45.6 40.6 69.6 84.2 0.4 93 95.8 89.2 41 87 4.6 80.8 35.4 46 g 0 0 0 0 0 0 18.2 8.2 12.8 2.2 1 47.6 3.2 0.4 0.2 0.4 3.4 50.6 3 11.2 18 t 0 0 0 0 0 0 26.4 31.2 33.8 11 8.8 22 2.4 1.6 9.2 3.2 5.6 23.6 11.2 23.6 27.8

M07930_2.00_shift8 (CTCFL)
; oligos_6nt_mkv4_m3 versus M07930_2.00 (CTCFL); m=32/201; ncol2=15; w=0; offset=0; strand=D; shift=8; score=0.639384; --------rGCGCCCCCTgsy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 27 8.6 4.4 0 5.4 0.8 11.8 0.8 0.2 4.6 19 1.6 15 c 0 0 0 0 0 0 0 0 11.4 14 81.2 0.8 91.4 97.4 75 83.8 98.8 7.2 10.8 31.4 42.6 g 0 0 0 0 0 0 0 0 49.2 72.6 4.6 91.4 1.8 0 7 0.4 0.2 5.8 59.4 55.4 13.6 t 0 0 0 0 0 0 0 0 12.4 4.8 9.8 7.8 1.4 1.8 6.2 15 0.8 82.4 10.8 11.6 28.8

M02935_2.00_shift9 (M02935_2.00)
; oligos_6nt_mkv4_m3 versus M02935_2.00; m=33/201; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.637378; ---------mCCCCCCCac-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.3121 18.5904 16.9679 4.701 3.83543 6.26236 7.45322 11.3504 67.0956 16.2721 0 0 c 0 0 0 0 0 0 0 0 0 34.1858 70.7181 77.5219 91.9115 92.7127 87.6401 84.3324 77.3865 10.4971 53.3507 0 0 g 0 0 0 0 0 0 0 0 0 22.1888 2.79255 0.670554 0.829589 0.27894 1.35135 3.8059 3.11409 6.98965 7.0626 0 0 t 0 0 0 0 0 0 0 0 0 13.3133 7.89894 4.83965 2.5579 3.17294 4.74621 4.4085 8.14901 15.4176 23.3146 0 0

M08349_2.00_shift10 (EGR3)
; oligos_6nt_mkv4_m3 versus M08349_2.00 (EGR3); m=34/201; ncol2=9; w=0; offset=2; strand=D; shift=10; score=0.636631; ----------CkCCYCCdC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0647668 21.8264 0.0647668 0.0647668 0.0647668 18.1995 0.0647668 29.5984 0.0647668 0 0 c 0 0 0 0 0 0 0 0 0 0 99.8057 0.0647668 99.8057 99.8057 73.6399 81.671 99.8057 0.0647668 75.7124 0 0 g 0 0 0 0 0 0 0 0 0 0 0.0647668 49.0285 0.0647668 0.0647668 0.0647668 0.0647668 0.0647668 40.2202 24.158 0 0 t 0 0 0 0 0 0 0 0 0 0 0.0647668 29.0803 0.0647668 0.0647668 26.2306 0.0647668 0.0647668 30.1166 0.0647668 0 0

M04628_2.00_shift7 (ZNF460)
; oligos_6nt_mkv4_m3 versus M04628_2.00 (ZNF460); m=35/201; ncol2=13; w=-1; offset=-1; strand=D; shift=7; score=0.635759; -------caaCgCCCCCCsm- ; cor=; Ncor= a 0 0 0 0 0 0 0 15.4613 40.5896 59.0674 9.85222 9.84802 3.35946 5.41761 3.78198 7.64263 5.35308 2.81532 23.9674 32.4594 0 c 0 0 0 0 0 0 0 47.8803 24.8677 23.9378 78.9163 20.6687 89.6976 90.4063 89.099 86.2217 91.2301 90.2027 26.925 34.9563 0 g 0 0 0 0 0 0 0 23.5661 19.9546 9.63731 3.94089 48.693 1.34378 0.790068 4.33815 3.12164 1.93622 2.81532 40.8465 14.9813 0 t 0 0 0 0 0 0 0 13.0923 14.5881 7.35751 7.29064 20.7903 5.5991 3.386 2.78087 3.01399 1.48064 4.16667 8.26109 17.603 0

M08289_2.00_shift8 (CTCF)
; oligos_6nt_mkv4_m3 versus M08289_2.00 (CTCF); m=36/201; ncol2=15; w=0; offset=0; strand=D; shift=8; score=0.635344; --------rGCGCCcCCTgsy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 35.4167 5.24425 2.08333 2.9454 1.22126 0.646552 19.0374 0.0718391 0.0718391 3.23276 17.0259 0.646552 16.1638 c 0 0 0 0 0 0 0 0 18.1753 14.4397 84.5546 1.50862 96.0489 96.0489 65.0144 77.9454 98.6351 12.1408 14.727 49.2098 35.1293 g 0 0 0 0 0 0 0 0 34.842 75.0718 0.0718391 89.1523 2.08333 0.359195 10.4167 0.359195 0.933908 5.81897 62.4282 46.3362 5.53161 t 0 0 0 0 0 0 0 0 11.5661 5.24425 13.2902 6.39368 0.646552 2.9454 5.53161 21.6236 0.359195 78.8075 5.81897 3.80747 43.1753

M07937_2.00_shift7 (ZBTB7A)
; oligos_6nt_mkv4_m3 versus M07937_2.00 (ZBTB7A); m=37/201; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.633716; -------cssmGmCCCyyscc ; cor=; Ncor= a 0 0 0 0 0 0 0 5.2 19.2 17.4 41 2 56.6 0 0.4 5 0 13 14.2 8.2 6.4 c 0 0 0 0 0 0 0 61.6 37 27.4 33.6 0 43.4 98.8 99.2 92.4 65.8 37 36.4 57.8 55.8 g 0 0 0 0 0 0 0 23.8 26.4 49.8 21.2 96 0 0 0 0 0.4 13 36.6 20.2 23 t 0 0 0 0 0 0 0 9.4 17.4 5.4 4.2 2 0 1.2 0.4 2.6 33.8 37 12.8 13.8 14.8

M08302_2.00_shift10 (EGR2)
; oligos_6nt_mkv4_m3 versus M08302_2.00 (EGR2); m=38/201; ncol2=9; w=0; offset=2; strand=D; shift=10; score=0.632122; ----------CgCCCmCdC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0739645 23.1509 0.0739645 0.0739645 0.0739645 37.9438 0.0739645 28.4763 0.0739645 0 0 c 0 0 0 0 0 0 0 0 0 0 99.7781 0.0739645 99.7781 99.7781 84.0976 61.9083 99.7781 0.0739645 89.1272 0 0 g 0 0 0 0 0 0 0 0 0 0 0.0739645 55.6953 0.0739645 0.0739645 0.0739645 0.0739645 0.0739645 45.932 10.7249 0 0 t 0 0 0 0 0 0 0 0 0 0 0.0739645 21.0799 0.0739645 0.0739645 15.7544 0.0739645 0.0739645 25.5178 0.0739645 0 0

M04470_2.00_shift9 (ZNF740)
; oligos_6nt_mkv4_m3 versus M04470_2.00 (ZNF740); m=39/201; ncol2=13; w=0; offset=1; strand=D; shift=9; score=0.631985; ---------cygCCCCCCCCa ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 15.541 8.9477 24.4419 2.9212 3.81944 0.361011 0.433839 0.433526 0.21692 0 4.37731 67.2363 c 0 0 0 0 0 0 0 0 0 48.2934 47.385 14.4533 93.5462 95.625 99.4224 99.5662 99.4942 99.5662 100 84.8952 14.2578 g 0 0 0 0 0 0 0 0 0 16.7756 4.34783 52.0999 1.97011 0 0 0 0.0722543 0 0 9.98767 11.2793 t 0 0 0 0 0 0 0 0 0 19.39 39.3195 9.00492 1.5625 0.555556 0.216606 0 0 0.21692 0 0.739827 7.22656

M02915_2.00_shift7 (EGR3)
; oligos_6nt_mkv4_m3 versus M02915_2.00 (EGR3); m=40/201; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.631129; -------yhmCGCCCMCGCAy ; cor=; Ncor= a 0 0 0 0 0 0 0 19.4798 26.747 58.5131 0.106952 2.87958 0 0 0 71.1479 0 1.73719 0.104004 80.6905 24.3844 c 0 0 0 0 0 0 0 37.2832 29.2169 39.7843 99.1979 1.39616 99.8924 99.4647 95.445 27.9312 99.5223 1.24722 98.752 3.45269 36.036 g 0 0 0 0 0 0 0 16.0694 11.506 0.567537 0 94.1536 0.107643 0 0.366492 0.675261 0.37155 95.8575 0.0520021 10.7417 6.60661 t 0 0 0 0 0 0 0 27.1676 32.5301 1.13507 0.695187 1.57068 0 0.535332 4.18848 0.245549 0.106157 1.15813 1.09204 5.11509 32.973

M01862_2.00_shift8 (M01862_2.00)
; oligos_6nt_mkv4_m3 versus M01862_2.00; m=41/201; ncol2=9; w=0; offset=0; strand=D; shift=8; score=0.625929; --------hmCGCCCmy---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.7384 42.0657 0.00439598 0.00439598 0.00439598 0.00439598 0.00439598 40.0281 6.56255 0 0 0 0 c 0 0 0 0 0 0 0 0 26.8904 57.9255 99.9868 0.00439598 99.9868 99.9868 99.9868 59.9631 55.5822 0 0 0 0 g 0 0 0 0 0 0 0 0 18.4418 0.00439598 0.00439598 99.9868 0.00439598 0.00439598 0.00439598 0.00439598 6.56255 0 0 0 0 t 0 0 0 0 0 0 0 0 27.9294 0 0 0 0 0 0 0 31.2927 0 0 0 0

M00139_2.00_shift9 (M00139_2.00)
; oligos_6nt_mkv4_m3 versus M00139_2.00; m=42/201; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.624218; ---------cmwCCCCCmh-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 17.3942 26.206 44.9152 3.32464 2.67398 1.01422 1.97029 2.08507 36.1848 29.3413 0 0 c 0 0 0 0 0 0 0 0 0 56.0438 41.9294 5.39124 92.8851 95.9251 96.9428 95.4098 95.0881 40.3922 35.4809 0 0 g 0 0 0 0 0 0 0 0 0 13.0154 12.2557 15.4063 2.29645 0.721493 0.138639 0.801061 1.20298 5.63298 9.66968 0 0 t 0 0 0 0 0 0 0 0 0 13.5466 19.609 34.2873 1.49386 0.679476 1.90431 1.81881 1.62386 17.79 25.5081 0 0

M08363_2.00_shift7 (SP1)
; oligos_6nt_mkv4_m3 versus M08363_2.00 (SP1); m=43/201; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.623463; -------CCCcsscyCCkCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 3 5.8 1.4 20.2 13.6 6.4 12.6 12 13.8 3.2 21.6 0 1 1.8 c 0 0 0 0 0 0 0 73.2 71.2 84 55.2 26.4 44 67.8 52.6 80 93.2 0 96.6 97.6 87 g 0 0 0 0 0 0 0 6.8 9.2 2.4 9.2 42.4 31.8 5.6 8.8 2.8 0 40.8 1.4 1.4 0 t 0 0 0 0 0 0 0 17 13.8 12.2 15.4 17.6 17.8 14 26.6 3.4 3.6 37.6 2 0 11.2

M02932_2.00_shift7 (M02932_2.00)
; oligos_6nt_mkv4_m3 versus M02932_2.00; m=44/201; ncol2=16; w=-1; offset=-1; strand=D; shift=7; score=0.621364; -------mhmCGCCCmCkCAm ; cor=; Ncor= a 0 0 0 0 0 0 0 32.3142 32.2785 61.8182 0 7.54445 0 0.157812 0 51.7114 0.314961 0.422833 0.157978 89.1816 44.2511 c 0 0 0 0 0 0 0 32.4196 30.9072 36.6753 99.6845 0.432484 99.9473 99.737 100 48.1306 99.5276 16.7321 99.842 5.73848 32.2785 g 0 0 0 0 0 0 0 11.3337 3.69198 0.363636 0.0525762 91.11 0.0527148 0.105208 0 0.157978 0 25.5814 0 3.62183 4.95781 t 0 0 0 0 0 0 0 23.9325 33.1224 1.14286 0.262881 0.913023 0 0 0 0 0.15748 57.2637 0 1.45814 18.5127

M00233_2.00_shift10 (EGR2)
; oligos_6nt_mkv4_m3 versus M00233_2.00 (EGR2); m=45/201; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.620957; ----------crCCCmCgya- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 17.7414 25.6279 11.1401 0.99736 5.34589 49.217 2.94523 21.4637 12.4753 35.9394 0 c 0 0 0 0 0 0 0 0 0 0 50.1942 8.11473 80.6845 95.3311 71.9757 40.2955 90.034 11.205 47.1698 19.5277 0 g 0 0 0 0 0 0 0 0 0 0 11.6569 43.9776 2.18267 2.99623 2.26218 5.4534 1.9159 49.2231 14.2073 21.1541 0 t 0 0 0 0 0 0 0 0 0 0 20.4075 22.2798 5.99273 0.675269 20.4162 5.03412 5.10483 18.1082 26.1475 23.3789 0

M04469_2.00_shift9 (ZNF740)
; oligos_6nt_mkv4_m3 versus M04469_2.00 (ZNF740); m=46/201; ncol2=13; w=0; offset=1; strand=D; shift=9; score=0.620464; ---------cyrCCCCCCCCA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 17.6303 12.5679 29.8318 4.99584 9.32203 1.64684 2.00182 2.10623 0.927644 0.188147 9.74576 70.5214 c 0 0 0 0 0 0 0 0 0 47.5829 52.5213 14.0747 87.8435 89.4068 96.5233 95.9964 96.6117 97.8664 99.2474 89.4068 15.9759 g 0 0 0 0 0 0 0 0 0 17.2512 5.58573 43.2909 3.08077 1.18644 0.365965 0.636943 0.274725 0.649351 0.28222 0.508475 4.54545 t 0 0 0 0 0 0 0 0 0 17.5355 29.3251 12.8026 4.07993 0.0847458 1.46386 1.36488 1.00733 0.556586 0.28222 0.338983 8.95722

M09506_2.00_shift10 (EGR1)
; oligos_6nt_mkv4_m3 versus M09506_2.00 (EGR1); m=47/201; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.617417; ----------CrCCCMCrCa- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 2.4 42.2 0.1 2.4 0.1 71.6 0.1 30 0.4 65.8 0 c 0 0 0 0 0 0 0 0 0 0 94 1 99.7 97.3 97.1 28.2 99.7 2.3 88.2 14.2 0 g 0 0 0 0 0 0 0 0 0 0 0.2 41.5 0.1 0.2 0.1 0.1 0.1 52.3 3.6 7.2 0 t 0 0 0 0 0 0 0 0 0 0 3.4 15.3 0.1 0.1 2.7 0.1 0.1 15.4 7.8 12.8 0

M02886_2.00_shift7 (EGR2)
; oligos_6nt_mkv4_m3 versus M02886_2.00 (EGR2); m=48/201; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.615124; -------yhmCGCCCACGCah ; cor=; Ncor= a 0 0 0 0 0 0 0 24.8517 26.3117 48.7763 0.897729 9.80359 0.159943 0.284495 0.353833 87.7621 0 3.52679 0.339789 55.6715 27.4918 c 0 0 0 0 0 0 0 29.8259 28.5412 41.1833 97.3068 0.822562 99.2003 99.2176 84.92 11.2903 99.679 1.74628 91.2504 10.6025 30.5764 g 0 0 0 0 0 0 0 19.1314 13.4922 2.33186 0.457666 82.3737 0.390972 0.302276 0 0.584677 0.249643 90.6865 0.30581 20.1279 13.1483 t 0 0 0 0 0 0 0 26.1909 31.6548 7.70861 1.33779 7.00017 0.2488 0.19559 14.7262 0.362903 0.0713267 4.0404 8.10398 13.5981 28.7835

M07754_2.00_shift10 (ZNF468)
; oligos_6nt_mkv4_m3 versus M07754_2.00 (ZNF468); m=49/201; ncol2=12; w=0; offset=2; strand=D; shift=10; score=0.613512; ----------CrCCCCCTCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 16.3043 42.6812 0.942029 0.0724638 0.0724638 0.0724638 0.0724638 2.97101 0.0724638 0.942029 0.942029 c 0 0 0 0 0 0 0 0 0 0 77.7536 0.942029 84.7101 98.913 88.4783 99.7826 99.4928 0.0724638 99.7826 98.3333 93.4058 g 0 0 0 0 0 0 0 0 0 0 2.10145 46.1594 9.92754 0.362319 0.0724638 0.0724638 0.0724638 0.652174 0.0724638 0.362319 0.942029 t 0 0 0 0 0 0 0 0 0 0 3.84058 10.2174 4.42029 0.652174 11.3768 0.0724638 0.362319 96.3043 0.0724638 0.362319 4.71014

M04468_2.00_shift9 (ZNF740)
; oligos_6nt_mkv4_m3 versus M04468_2.00 (ZNF740); m=50/201; ncol2=13; w=0; offset=1; strand=D; shift=9; score=0.611413; ---------cygCCCCCCCCA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 10.4898 3.7037 13.6842 3.32393 0.10327 0.892538 0.757303 2.56321 1.37761 2.66999 0 84.486 c 0 0 0 0 0 0 0 0 0 61.1477 45.0794 12.2978 85.5127 93.8726 96.9654 98.7018 92.345 96.609 97.33 76.6761 11.2627 g 0 0 0 0 0 0 0 0 0 11.0015 3.59788 58.6906 10.5989 1.13597 1.21385 0.036062 0.311742 0 0 22.4426 0.729695 t 0 0 0 0 0 0 0 0 0 17.3611 47.619 15.3273 0.56444 4.88812 0.92824 0.504868 4.78005 2.01342 0 0.881335 3.52157

M01172_2.00_shift11 (VEZF1)
; oligos_6nt_mkv4_m3 versus M01172_2.00 (VEZF1); m=51/201; ncol2=10; w=0; offset=3; strand=D; shift=11; score=0.611241; -----------CCCCCCmytw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 7.173 0.17421 0.427526 0.21282 0.666427 1.00267 40.685 4.47697 24.049 33.3261 c 0 0 0 0 0 0 0 0 0 0 0 79.0692 99.7338 99.5102 99.7526 98.9066 97.7743 35.7253 55.0887 17.1174 17.3977 g 0 0 0 0 0 0 0 0 0 0 0 13.7402 0.0839533 0.0167436 0.0014197 0.00207909 0.333758 11.088 7.02128 21.1173 15.2769 t 0 0 0 0 0 0 0 0 0 0 0 0.0176032 0 0.0455138 0.0331303 0.424933 0.889284 12.5016 33.413 37.7163 33.9993

M08884_2.00_shift7 (EGR2)
; oligos_6nt_mkv4_m3 versus M08884_2.00 (EGR2); m=52/201; ncol2=18; w=-1; offset=-1; strand=D; shift=7; score=0.611215; -------yyCCdCCCmCwCmy ; cor=; Ncor= a 0 0 0 0 0 0 0 13.6 8.2 10.8 6.2 34.6 2 6 1.8 48.6 1.4 39.6 5.6 29.6 7 c 0 0 0 0 0 0 0 56.2 50.2 78.2 87.4 2.2 91.6 89 79.4 46.2 93 4.4 76.6 45 50.6 g 0 0 0 0 0 0 0 4.8 7.4 3.4 0.6 28.2 4 1.4 0.6 1.2 2.2 19 10.2 10.4 10.4 t 0 0 0 0 0 0 0 25.4 34.2 7.6 5.8 35 2.4 3.6 18.2 4 3.4 37 7.6 15 32

M04698_2.00_rc_shift9 (E2F2_rc)
; oligos_6nt_mkv4_m3 versus M04698_2.00_rc (E2F2_rc); m=53/201; ncol2=11; w=0; offset=1; strand=R; shift=9; score=0.609531; ---------GCGCgCsCmCs- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 4.46927 0 10.2362 0 12.3134 0 8.48057 0 25.7576 0 7.26744 0 c 0 0 0 0 0 0 0 0 0 22.905 97.8142 11.0236 89.5 11.9403 97.8142 25.4417 85.6459 42.6407 97.8142 44.7674 0 g 0 0 0 0 0 0 0 0 0 70.9497 2.18579 70.4724 6.5 66.791 0 63.2509 10.5263 19.3723 2.18579 36.6279 0 t 0 0 0 0 0 0 0 0 0 1.67598 0 8.26772 4 8.95522 2.18579 2.82686 3.82775 12.2294 0 11.3372 0

M00776_2.00_shift9 (M00776_2.00)
; oligos_6nt_mkv4_m3 versus M00776_2.00; m=54/201; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.609196; ---------mcgCCCmCgy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 28.0343 15.9193 23.9553 8.00057 1.93417 3.06438 62.2598 2.16924 21.9875 14.4571 0 0 c 0 0 0 0 0 0 0 0 0 40.1824 56.1223 8.72499 89.078 91.8062 79.0315 27.6968 92.2383 7.03203 46.117 0 0 g 0 0 0 0 0 0 0 0 0 12.2243 9.27695 49.2146 0.00744296 5.58274 1.29673 5.37263 2.25777 55.1731 13.3455 0 0 t 0 0 0 0 0 0 0 0 0 19.5589 18.6815 18.1051 2.91396 0.67684 16.6074 4.67074 3.33468 15.8074 26.0804 0 0

M08880_2.00_shift5 (KLF9)
; oligos_6nt_mkv4_m3 versus M08880_2.00 (KLF9); m=55/201; ncol2=15; w=-3; offset=-3; strand=D; shift=5; score=0.608433; -----gGcCMCGCCCmCyyc- ; cor=; Ncor= a 0 0 0 0 0 14.4531 10.9375 16.0156 1.5625 71.875 0 23.0469 0 1.5625 0 32.0312 2.73438 9.76562 9.375 11.3281 0 c 0 0 0 0 0 20.3125 3.125 67.1875 97.6562 26.1719 100 0.390625 99.2188 98.0469 98.4375 63.2812 80.0781 26.5625 46.0938 63.6719 0 g 0 0 0 0 0 52.3438 84.375 11.7188 0.390625 1.5625 0 75.7812 0.78125 0.390625 0 0.390625 1.17188 13.6719 18.75 18.75 0 t 0 0 0 0 0 12.8906 1.5625 5.07812 0.390625 0.390625 0 0.78125 0 0 1.5625 4.29688 16.0156 50 25.7812 6.25 0

M04658_2.00_shift7 (KLF14)
; oligos_6nt_mkv4_m3 versus M04658_2.00 (KLF14); m=56/201; ncol2=13; w=-1; offset=-1; strand=D; shift=7; score=0.607295; -------crcCaCrCCCmcc- ; cor=; Ncor= a 0 0 0 0 0 0 0 18.6657 35.0563 17.8602 3.48319 54.8431 1.55897 35.8318 0 0.333264 0.287186 35.8439 11.1429 20.7362 0 c 0 0 0 0 0 0 0 38.9313 10.1459 62.6548 88.8259 20.6916 98.0821 0 99.6665 99.5938 80.7754 50.5193 62.5422 41.0331 0 g 0 0 0 0 0 0 0 19.7218 44.6686 8.18319 1.66264 16.1782 0 52.0917 0 0.0729015 0.0675733 2.51964 5.99601 13.7927 0 t 0 0 0 0 0 0 0 22.6812 10.1292 11.3018 6.02824 8.28698 0.358974 12.0765 0.333507 0 18.8698 11.1171 20.3189 24.4379 0

M00784_2.00_shift10 (M00784_2.00)
; oligos_6nt_mkv4_m3 versus M00784_2.00; m=57/201; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.605173; ----------cCCCCCCayw- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 17.3335 21.1796 0.0178463 0.803491 0.0177459 2.56885 12.8322 46.6398 19.5656 28.8778 0 c 0 0 0 0 0 0 0 0 0 0 64.2411 73.1883 99.8869 96.661 98.3368 95.9145 75.336 24.84 35.2961 21.6082 0 g 0 0 0 0 0 0 0 0 0 0 11.1634 0.0305936 0.0610562 0.072891 0.110626 0.0783521 1.32572 14.3314 12.2285 22.0447 0 t 0 0 0 0 0 0 0 0 0 0 7.26191 5.60151 0.0341852 2.46258 1.5348 1.43829 10.5061 14.1888 32.9098 27.4694 0

M04467_2.00_shift6 (ZNF740)
; oligos_6nt_mkv4_m3 versus M04467_2.00 (ZNF740); m=58/201; ncol2=13; w=-2; offset=-2; strand=D; shift=6; score=0.601691; ------cygCCCCCCCCAC-- ; cor=; Ncor= a 0 0 0 0 0 0 16.3462 8.51666 16.5473 3.08014 1.76844 2.31023 1.0166 1.14401 1.92819 1.04027 2.9304 83.0305 7.7469 0 0 c 0 0 0 0 0 0 49.2445 35.7951 15.4853 86.9019 96.9303 95.8086 98.3734 97.7793 96.6755 97.7852 95.9374 12.5147 71.2892 0 0 g 0 0 0 0 0 0 14.011 4.99686 55.9397 9.65909 1.2012 0.627063 0.169434 0.336474 0.49867 0.402685 0.566101 1.17233 1.33057 0 0 t 0 0 0 0 0 0 20.3984 50.6914 12.0277 0.358852 0.1001 1.25413 0.440529 0.740242 0.897606 0.771812 0.566101 3.28253 19.6334 0 0

M00242_2.00_shift9 (KLF11)
; oligos_6nt_mkv4_m3 versus M00242_2.00 (KLF11); m=59/201; ncol2=8; w=0; offset=1; strand=D; shift=9; score=0.598459; ---------mCGCCCCC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 35.6838 0.052521 5.30462 5.30462 0.052521 0.052521 21.0609 0.0766871 0 0 0 0 c 0 0 0 0 0 0 0 0 0 64.1738 99.8424 10.5567 94.5903 94.5903 99.8424 78.834 92.1012 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0.0712251 0.052521 84.0861 0.052521 5.30462 0.052521 0.052521 0.0766871 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0.0712251 0.052521 0.052521 0.052521 0.052521 0.052521 0.052521 7.7454 0 0 0 0

M07727_2.00_shift10 (ZNF460)
; oligos_6nt_mkv4_m3 versus M07727_2.00 (ZNF460); m=60/201; ncol2=12; w=0; offset=2; strand=D; shift=10; score=0.59744; ----------cgCCrCCkCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 15.7 0.1 0.1 4.1 26.5 0.1 0.1 10.5 0.1 0.1 3.7 c 0 0 0 0 0 0 0 0 0 0 66.9 23.3 85.3 95.7 9.7 99.7 99.7 0.1 99.7 77.7 77.3 g 0 0 0 0 0 0 0 0 0 0 17.3 66.1 14.5 0.1 50.1 0.1 0.1 28.5 0.1 22.1 4.5 t 0 0 0 0 0 0 0 0 0 0 0.1 10.5 0.1 0.1 13.7 0.1 0.1 60.9 0.1 0.1 14.5

M00143_2.00_shift10 (M00143_2.00)
; oligos_6nt_mkv4_m3 versus M00143_2.00; m=61/201; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.59674; ----------ccCCCCCayk- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 23.4762 22.5596 3.46737 4.55575 4.44789 11.7815 6.04568 40.4091 24.0527 23.464 0 c 0 0 0 0 0 0 0 0 0 0 48.715 67.0984 90.3233 89.6927 84.1356 86.1883 87.2994 15.0151 29.9716 24.915 0 g 0 0 0 0 0 0 0 0 0 0 10.7616 2.68092 2.81059 0.0747497 2.18678 0.285514 0.548452 20.0665 17.4659 26.4556 0 t 0 0 0 0 0 0 0 0 0 0 17.0472 7.66113 3.39871 5.67681 9.22973 1.74462 6.10644 24.5093 28.5098 25.1654 0

M00241_2.00_shift9 (KLF11)
; oligos_6nt_mkv4_m3 versus M00241_2.00 (KLF11); m=62/201; ncol2=8; w=0; offset=1; strand=D; shift=9; score=0.596443; ---------mCGCCCCC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 38.4202 0.0499002 10.0299 5.03992 5.03992 0.0499002 25 0.0664894 0 0 0 0 c 0 0 0 0 0 0 0 0 0 61.4264 99.8503 10.0299 94.8603 89.8703 99.8503 74.9002 93.1516 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0.0766871 0.0499002 79.8902 0.0499002 5.03992 0.0499002 0.0499002 0.0664894 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0.0766871 0.0499002 0.0499002 0.0499002 0.0499002 0.0499002 0.0499002 6.71543 0 0 0 0

M03706_2.00_shift6 (M03706_2.00)
; oligos_6nt_mkv4_m3 versus M03706_2.00; m=63/201; ncol2=13; w=-2; offset=-2; strand=D; shift=6; score=0.59364; ------GmCACGCCCmCyy-- ; cor=; Ncor= a 0 0 0 0 0 0 23.3211 37.4477 0.930714 69.7044 4.95466 22.5231 0.383944 1.1708 0.880339 28.9079 2.44621 18.8759 22.0495 0 0 c 0 0 0 0 0 0 4.34676 56.3408 97.5526 8.34975 91.6451 0.479945 98.7784 97.4518 92.2726 65.3429 83.407 37.5044 32.1555 0 0 g 0 0 0 0 0 0 69.1087 1.99084 0.620476 21.5025 2.16969 74.4943 0.383944 0.65427 0.945549 0.577234 0.825228 8.16543 11.6254 0 0 t 0 0 0 0 0 0 3.22344 4.22059 0.896243 0.44335 1.23057 2.50257 0.453752 0.72314 5.90153 5.17202 13.3215 35.4542 34.1696 0 0

M00230_2.00_shift9 (EGR2)
; oligos_6nt_mkv4_m3 versus M00230_2.00 (EGR2); m=64/201; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.592851; ---------mcrCCCmccy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.4696 12.7214 30.8306 6.07116 0.756708 7.19322 39.7106 8.59421 16.1831 12.8811 0 0 c 0 0 0 0 0 0 0 0 0 37.5897 53.1588 7.45219 86.795 95.7003 69.626 41.7466 67.4299 63.6863 47.7397 0 0 g 0 0 0 0 0 0 0 0 0 12.5125 11.1706 43.7507 0.00921935 3.22593 2.41848 9.03963 6.49536 5.77749 10.1326 0 0 t 0 0 0 0 0 0 0 0 0 19.4283 22.9492 17.9665 7.12457 0.317024 20.7623 9.50311 17.4805 14.3531 29.2466 0 0

M00778_2.00_shift10 (M00778_2.00)
; oligos_6nt_mkv4_m3 versus M00778_2.00; m=65/201; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.59117; ----------cgCCCMCGca- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 10.1428 18.7938 2.98506 0.0789937 0.779978 73.0394 0.052912 12.7618 6.82934 42.8018 0 c 0 0 0 0 0 0 0 0 0 0 65.8094 3.20121 95.93 99.6449 91.9744 25.3049 99.5715 4.33385 62.2543 16.064 0 g 0 0 0 0 0 0 0 0 0 0 5.56648 63.6582 0.255028 0.23731 0.206286 0.836105 0.0424629 74.1771 8.0143 21.9021 0 t 0 0 0 0 0 0 0 0 0 0 18.4814 14.3468 0.829957 0.0388368 7.03931 0.819549 0.333163 8.72729 22.9021 19.2321 0

M02889_2.00_shift7 (EGR4)
; oligos_6nt_mkv4_m3 versus M02889_2.00 (EGR4); m=66/201; ncol2=16; w=-1; offset=-1; strand=D; shift=7; score=0.585005; -------yymCGCCCACGCAh ; cor=; Ncor= a 0 0 0 0 0 0 0 20.9027 20.9149 55.1426 2.00556 6.32465 0.238663 2.52578 0 71.8162 0.915713 2.54896 0.20982 68.1758 32.4289 c 0 0 0 0 0 0 0 26.1329 30.4483 38.6501 88.6815 5.40325 96.4851 93.6224 94.8105 16.8369 91.6129 19.6149 91.3554 12.4131 26.3614 g 0 0 0 0 0 0 0 17.9832 9.64318 3.03335 2.97855 80.2298 1.36689 2.25216 2.36865 5.55378 2.37253 75.0684 3.8397 12.2651 7.7068 t 0 0 0 0 0 0 0 34.9812 38.9936 3.17397 6.33439 8.04232 1.90931 1.59966 2.82084 5.79317 5.09886 2.76775 4.59505 7.14603 33.5029

M08445_2.00_shift10 (INSM1)
; oligos_6nt_mkv4_m3 versus M08445_2.00 (INSM1); m=67/201; ncol2=12; w=0; offset=2; strand=D; shift=10; score=0.582249; ----------ygcCCCCwkrC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 8.33333 20.8333 25 0 0 0 0 33.3333 12.5 54.1667 16.6667 c 0 0 0 0 0 0 0 0 0 0 50 0 66.6667 100 100 95.8333 100 0 0 12.5 83.3333 g 0 0 0 0 0 0 0 0 0 0 0 66.6667 8.33333 0 0 4.16667 0 0 62.5 33.3333 0 t 0 0 0 0 0 0 0 0 0 0 41.6667 12.5 0 0 0 0 0 66.6667 25 0 0

M00135_2.00_shift10 (M00135_2.00)
; oligos_6nt_mkv4_m3 versus M00135_2.00; m=68/201; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.576747; ----------mgmCCCCcww- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 34.2572 8.19755 37.9693 0.923364 0.131831 14.6301 2.6438 18.9683 31.1332 30.6138 0 c 0 0 0 0 0 0 0 0 0 0 26.9477 5.33258 58.3686 98.5209 99.8597 83.3526 79.2191 45.2756 21.9392 20.7273 0 g 0 0 0 0 0 0 0 0 0 0 20.3666 63.0441 0.004593 0.00680749 0.00406137 0.0174761 2.14302 12.5883 20.6616 20.1147 0 t 0 0 0 0 0 0 0 0 0 0 18.4285 23.4257 3.65749 0.548959 0 1.99986 15.9941 23.1679 26.266 28.5441 0

M08967_2.00_shift4 (M08967_2.00)
; oligos_6nt_mkv4_m3 versus M08967_2.00; m=69/201; ncol2=19; w=-4; offset=-4; strand=D; shift=4; score=0.576333; ----cckCCCCkCCCCCwccs ; cor=; Ncor= a 0 0 0 0 7.6 9 7.2 0.8 3.4 1.2 2.8 6 0.2 1.8 3.4 5.2 2.4 32.2 9 9 5 c 0 0 0 0 58.2 53.2 12.8 87 82.2 93.2 84.4 1.2 98 88.4 77.6 81.8 90.2 15.8 67.4 58.6 45.6 g 0 0 0 0 21 14.4 44.2 4.4 0.4 1.6 0.6 29.2 0.4 1.4 2.8 5.2 3 22 15.2 14.6 31.6 t 0 0 0 0 13.2 23.4 35.8 7.8 14 4 12.2 63.6 1.4 8.4 16.2 7.8 4.4 30 8.4 17.8 17.8

M07652_2.00_shift10 (ZNF543)
; oligos_6nt_mkv4_m3 versus M07652_2.00 (ZNF543); m=70/201; ncol2=12; w=0; offset=2; strand=D; shift=10; score=0.570548; ----------sGsCCCCKCCc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 3.72984 0.100806 0.504032 0.100806 0.100806 0.100806 0.100806 0.100806 0.100806 11.3911 14.2137 c 0 0 0 0 0 0 0 0 0 0 31.9556 0.100806 50.1008 96.875 70.2621 87.6008 99.6976 0.504032 98.8911 88.4073 51.3105 g 0 0 0 0 0 0 0 0 0 0 64.2137 88.4073 30.746 0.100806 9.375 8.97177 0.100806 25.9073 0.504032 0.100806 20.6653 t 0 0 0 0 0 0 0 0 0 0 0.100806 11.3911 18.6492 2.92339 20.2621 3.32661 0.100806 73.4879 0.504032 0.100806 13.8105

M04514_2.00_shift6 (KLF15)
; oligos_6nt_mkv4_m3 versus M04514_2.00 (KLF15); m=71/201; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.568953; ------GCCMCGCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 0 22.0614 15.9576 2.97039 68.0475 0 8.01932 0 0 0 34.3078 3.20988 21.9548 0 0 0 c 0 0 0 0 0 0 0 81.541 87.8529 31.9525 100 0 100 100 93.6858 61.6939 75.7059 34.0573 0 0 0 g 0 0 0 0 0 0 75.7569 0 2.87204 0 0 86.2995 0 0 0 0 0.901771 12.7407 0 0 0 t 0 0 0 0 0 0 2.18166 2.50137 6.30471 0 0 5.68116 0 0 6.31424 3.99828 20.1825 31.2472 0 0 0

M07780_2.00_shift8 (ZNF2)
; oligos_6nt_mkv4_m3 versus M07780_2.00 (ZNF2); m=72/201; ncol2=9; w=0; offset=0; strand=D; shift=8; score=0.56599; --------aGCGCCmcC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 62.625 0.125 0.125 17.125 0.125 0.125 31.625 0.125 0.125 0 0 0 0 c 0 0 0 0 0 0 0 0 17.125 0.125 99.625 0.125 89.125 99.625 47.125 64.125 99.625 0 0 0 0 g 0 0 0 0 0 0 0 0 14.125 99.625 0.125 82.625 10.625 0.125 18.125 12.625 0.125 0 0 0 0 t 0 0 0 0 0 0 0 0 6.125 0.125 0.125 0.125 0.125 0.125 3.125 23.125 0.125 0 0 0 0

M00632_2.00_shift7 (M00632_2.00)
; oligos_6nt_mkv4_m3 versus M00632_2.00; m=73/201; ncol2=10; w=-1; offset=-1; strand=D; shift=7; score=0.565029; -------aymCGCCCcy---- ; cor=; Ncor= a 0 0 0 0 0 0 0 31.043 14.1167 57.0189 0.0225276 8.58113 0.0225276 0.0225276 0.0225276 21.794 10.9058 0 0 0 0 c 0 0 0 0 0 0 0 22.9857 37.4062 42.936 99.9324 0.0225276 99.9324 99.9324 99.9324 66.7367 35.9751 0 0 0 0 g 0 0 0 0 0 0 0 22.9857 14.1167 0.0225276 0.0225276 91.3738 0.0225276 0.0225276 0.0225276 2.03687 10.9058 0 0 0 0 t 0 0 0 0 0 0 0 22.9857 34.3604 0.0225276 0.0225276 0.0225276 0.0225276 0.0225276 0.0225276 9.43238 42.2132 0 0 0 0

M08398_2.00_shift5 (KLF14)
; oligos_6nt_mkv4_m3 versus M08398_2.00 (KLF14); m=74/201; ncol2=14; w=-3; offset=-3; strand=D; shift=5; score=0.564004; -----ggcCmCGCCCmCyy-- ; cor=; Ncor= a 0 0 0 0 0 22.5873 11.9097 9.2402 4.3121 37.7823 0 13.963 0 0 0 41.6838 2.6694 13.347 13.7577 0 0 c 0 0 0 0 0 13.7577 14.5791 60.9856 79.4661 61.3963 99.5893 0 100 100 92.4025 49.076 74.1273 45.9959 34.7023 0 0 g 0 0 0 0 0 57.2895 67.3511 7.3922 4.3121 0.8214 0 77.2074 0 0 0 0.8214 4.7228 8.0082 20.1232 0 0 t 0 0 0 0 0 6.3655 6.1602 22.3819 11.9097 0 0.4107 8.8296 0 0 7.5975 8.4189 18.4805 32.6489 31.4168 0 0

M04512_2.00_shift6 (KLF15)
; oligos_6nt_mkv4_m3 versus M04512_2.00 (KLF15); m=75/201; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.557391; ------rCCmCGCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 0 26.7918 15.1634 5.5098 65.5063 0.240964 13.6948 0.359368 0.120627 0.406939 26.0445 5.30621 13.4058 0 0 0 c 0 0 0 0 0 0 10.7319 70.854 81.1765 31.3766 99.759 1.54364 99.1854 99.8794 88.67 61.7603 71.1917 50.8454 0 0 0 g 0 0 0 0 0 0 51.6875 5.57933 9.43137 2.19937 0 81.9315 0.167705 0 0.321268 0.487805 3.16162 10.5556 0 0 0 t 0 0 0 0 0 0 10.7888 8.40322 3.88235 0.917722 0 2.83 0.287494 0 10.6018 11.7073 20.3405 25.1932 0 0 0

M00375_2.00_shift11 (M00375_2.00)
; oligos_6nt_mkv4_m3 versus M00375_2.00; m=76/201; ncol2=9; w=0; offset=3; strand=D; shift=11; score=0.557164; -----------gCCcmCgca- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 24.3908 13.6334 2.50247 7.7362 48.4453 2.10408 20.8312 15.2373 34.2838 0 c 0 0 0 0 0 0 0 0 0 0 0 12.7331 74.6286 84.5445 67.0817 40.4649 91.2753 12.1393 46.7 21.0031 0 g 0 0 0 0 0 0 0 0 0 0 0 41.026 2.7802 9.1823 3.72814 5.15741 0.424807 48.7377 13.9258 23.919 0 t 0 0 0 0 0 0 0 0 0 0 0 21.8501 8.95779 3.77076 21.454 5.93243 6.19585 18.2918 24.1369 20.7941 0

M00130_2.00_shift8 (PLAGL1)
; oligos_6nt_mkv4_m3 versus M00130_2.00 (PLAGL1); m=77/201; ncol2=10; w=0; offset=0; strand=D; shift=8; score=0.555833; --------ggggCCCCyy--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.8508 18.281 15.0319 15.8555 3.84648 6.79701 0.915062 5.68744 24.3664 23.0968 0 0 0 c 0 0 0 0 0 0 0 0 21.4858 17.0451 19.1093 20.3589 93.4251 92.4328 75.2816 87.2049 33.8929 30.256 0 0 0 g 0 0 0 0 0 0 0 0 32.7005 42.3455 49.4112 55.3411 0.0979948 0.0170174 1.12889 3.05953 11.9796 20.0794 0 0 0 t 0 0 0 0 0 0 0 0 24.9629 22.3285 16.4476 8.44451 2.63046 0.75313 22.6744 4.04815 29.7612 26.5677 0 0 0

M00224_2.00_shift8 (KLF1)
; oligos_6nt_mkv4_m3 versus M00224_2.00 (KLF1); m=78/201; ncol2=8; w=0; offset=0; strand=D; shift=8; score=0.555714; --------ymCGCCCh----- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.124378 33.2965 0.110619 0.110619 0.110619 0.110619 0.110619 28.5511 0 0 0 0 0 c 0 0 0 0 0 0 0 0 49.8756 66.4823 99.6681 0.110619 99.6681 99.6681 99.6681 42.7557 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0.124378 0.110619 0.110619 99.6681 0.110619 0.110619 0.110619 0.142045 0 0 0 0 0 t 0 0 0 0 0 0 0 0 49.8756 0.110619 0.110619 0.110619 0.110619 0.110619 0.110619 28.5511 0 0 0 0 0

M08885_2.00_shift7 (CTCFL)
; oligos_6nt_mkv4_m3 versus M08885_2.00 (CTCFL); m=79/201; ncol2=17; w=-1; offset=-1; strand=D; shift=7; score=0.552608; -------brGCGCCCCCTrsy ; cor=; Ncor= a 0 0 0 0 0 0 0 9.33333 38.4444 5.77778 1.55556 1.55556 4 0.666667 9.55556 1.33333 0.222222 5.11111 25.5556 1.11111 21.7778 c 0 0 0 0 0 0 0 38 7.77778 20.6667 76.8889 0.444444 93.5556 98.2222 73.3333 75.5556 97.7778 3.11111 9.11111 41.7778 37.3333 g 0 0 0 0 0 0 0 26.2222 40.8889 70.6667 0.444444 89.7778 1.33333 0.222222 9.11111 0 1.11111 4.44444 51.1111 44.6667 6.88889 t 0 0 0 0 0 0 0 26.4444 12.8889 2.88889 21.1111 8.22222 1.11111 0.888889 8 23.1111 0.888889 87.3333 14.2222 12.4444 34

M08290_2.00_shift12 (MAZ)
; oligos_6nt_mkv4_m3 versus M08290_2.00 (MAZ); m=80/201; ncol2=9; w=0; offset=4; strand=D; shift=12; score=0.54854; ------------sCCCCkCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 2.21823 0.059952 0.059952 0.059952 0.059952 8.93285 0.059952 0.059952 0.059952 c 0 0 0 0 0 0 0 0 0 0 0 0 52.8177 92.1463 99.8201 99.8201 99.8201 0.059952 99.8201 99.8201 88.789 g 0 0 0 0 0 0 0 0 0 0 0 0 37.7098 0.059952 0.059952 0.059952 0.059952 35.3118 0.059952 0.059952 0.059952 t 0 0 0 0 0 0 0 0 0 0 0 0 7.2542 7.73381 0.059952 0.059952 0.059952 55.6954 0.059952 0.059952 11.0911

M04513_2.00_shift6 (KLF15)
; oligos_6nt_mkv4_m3 versus M04513_2.00 (KLF15); m=81/201; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.54791; ------rcCmCrCCCmcc--- ; cor=; Ncor= a 0 0 0 0 0 0 28.524 19.4706 14.8438 61.7341 3.34436 26.8483 3.79323 5.3418 6.84564 33.1376 11.742 21.0788 0 0 0 c 0 0 0 0 0 0 15.5473 63.1813 75.3437 31.1753 88.6071 11.12 89.6616 90.0635 80.906 55.3028 67.6831 45.1452 0 0 0 g 0 0 0 0 0 0 49.5025 6.36792 2.3125 3.19846 1.94781 48.307 1.3016 2.24131 4.83221 2.89908 3.75044 9.50207 0 0 0 t 0 0 0 0 0 0 6.4262 10.9801 7.5 3.8921 6.1007 13.7247 5.24358 2.35338 7.41611 8.66055 16.8244 24.2739 0 0 0

M07927_2.00_shift1 (EGR1)
; oligos_6nt_mkv4_m3 versus M07927_2.00 (EGR1); m=82/201; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.547105; -ccscscccCCGCCCmCGCmc ; cor=; Ncor= a 0 13.0705 16.1826 11.6183 17.0124 13.9004 13.0705 12.6556 12.0332 15.7676 1.0373 19.2946 0 0 0 43.5685 0 5.6017 0 37.1369 10.3734 c 0 48.1328 49.5851 44.1909 45.8506 38.1743 49.7925 47.3029 41.0788 76.3486 97.5104 0 100 100 94.6058 56.0166 100 0 92.1162 28.8382 45.8506 g 0 22.6141 22.8216 25.1037 18.4647 30.7054 20.5394 17.4274 21.9917 2.4896 0.2075 71.5768 0 0 0 0.4149 0 85.6846 4.3568 18.6722 24.2739 t 0 16.1826 11.4108 19.0871 18.6722 17.2199 16.5975 22.6141 24.8963 5.39421 1.2448 9.1286 0 0 5.3942 0 0 8.7137 3.527 15.3527 19.5021

M01864_2.00_shift12 (M01864_2.00)
; oligos_6nt_mkv4_m3 versus M01864_2.00; m=83/201; ncol2=9; w=0; offset=4; strand=D; shift=12; score=0.545907; ------------CCCmCGcat ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 16.0527 1.55222 2.3878 48.8627 1.22013 16.7571 8.3944 43.7023 24.4582 c 0 0 0 0 0 0 0 0 0 0 0 0 73.3965 93.6616 88.2675 47.8952 96.4432 2.79778 59.0016 13.7001 24.704 g 0 0 0 0 0 0 0 0 0 0 0 0 4.64539 4.13583 1.01043 1.76653 0.65636 68.6365 10.4601 22.3629 19.4329 t 0 0 0 0 0 0 0 0 0 0 0 0 5.90545 0.650307 8.33424 1.47553 1.68027 11.8086 22.144 20.2347 31.4049

M04517_2.00_shift6 (SP6,SP8)
; oligos_6nt_mkv4_m3 versus M04517_2.00 (SP6,SP8); m=84/201; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.545851; ------rcCMCGCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 0 34.3794 20.4684 8.29254 69.9729 0.139373 7.67123 0.209278 0.209497 0.0941029 44.6849 7.16262 22.426 0 0 0 c 0 0 0 0 0 0 15.2327 57.7597 81.6585 27.8559 98.8153 2.86149 98.9187 99.0223 88.9586 44.2458 66.7384 38.3639 0 0 0 g 0 0 0 0 0 0 37.4824 9.47047 0.950187 0.542808 0.278746 86.3318 0 0.628492 1.12923 0.627156 5.68706 9.69676 0 0 0 t 0 0 0 0 0 0 12.9055 12.3014 9.09876 1.62842 0.766551 3.13546 0.871992 0.139665 9.81807 10.4421 20.4119 29.5134 0 0 0

M06118_2.00_shift5 (SP6)
; oligos_6nt_mkv4_m3 versus M06118_2.00 (SP6); m=85/201; ncol2=14; w=-3; offset=-3; strand=D; shift=5; score=0.54571; -----ggycmCGCCCmcyy-- ; cor=; Ncor= a 0 0 0 0 0 18.1996 12.1429 16.1458 15.9722 51.0417 2.60417 6.77083 1.21528 1.73611 1.5625 47.0486 10.2431 13.1944 13.0742 0 0 c 0 0 0 0 0 17.4168 5.35714 45.1389 58.8542 48.7847 96.875 0 98.7847 97.7431 85.7639 41.1458 61.8056 31.25 30.9187 0 0 g 0 0 0 0 0 45.4012 65.8929 11.4583 2.77778 0.173611 0 88.5417 0 0 0 0.347222 5.72917 12.8472 24.735 0 0 t 0 0 0 0 0 18.9824 16.6071 27.2569 22.3958 0 0.520833 4.6875 0 0.520833 12.6736 11.4583 22.2222 42.7083 31.2721 0 0

M00226_2.00_shift8 (KLF1)
; oligos_6nt_mkv4_m3 versus M00226_2.00 (KLF1); m=86/201; ncol2=8; w=0; offset=0; strand=D; shift=8; score=0.541286; --------CmCGCCCm----- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 8.36106 40.6055 0.0302663 21.2167 0.0302663 0.0302663 0.0302663 52.1267 0 0 0 0 0 c 0 0 0 0 0 0 0 0 74.9168 59.3321 96.8826 3.0569 99.9092 99.9092 99.9092 30.4253 0 0 0 0 0 g 0 0 0 0 0 0 0 0 4.20133 0.031211 3.0569 75.6961 0.0302663 0.0302663 0.0302663 4.38368 0 0 0 0 0 t 0 0 0 0 0 0 0 0 12.5208 0.031211 0.0302663 0.0302663 0.0302663 0.0302663 0.0302663 13.0642 0 0 0 0 0

M02022_2.00_rc_shift11 (M02022_2.00_rc)
; oligos_6nt_mkv4_m3 versus M02022_2.00_rc; m=87/201; ncol2=10; w=0; offset=3; strand=R; shift=11; score=0.541199; -----------rCCCgyAtvw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 47.6726 1.05065 0.481659 17.2697 10.8348 0.23373 80.3614 6.67224 25.2718 27.3727 c 0 0 0 0 0 0 0 0 0 0 0 8.20182 98.4366 98.4433 70.7359 15.3753 57.1917 4.16424 23.0567 26.3031 23.5599 g 0 0 0 0 0 0 0 0 0 0 0 33.5943 0.145063 0.755391 4.38835 58.719 10.553 7.00437 14.1251 27.1042 21.9671 t 0 0 0 0 0 0 0 0 0 0 0 10.5313 0.367664 0.319653 7.60612 15.0709 32.0216 8.47003 56.146 21.3209 27.1003

M04645_2.00_shift6 (SP6,SP9)
; oligos_6nt_mkv4_m3 versus M04645_2.00 (SP6,SP9); m=88/201; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.540121; ------rcCmCGCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 0 34.0131 14.7242 10.1294 65.7105 0.0806777 6.95222 0.8846 0 1.33288 41.9423 6.64311 17.1359 0 0 0 c 0 0 0 0 0 0 17.9445 63.7617 77.343 30.2145 98.8705 6.58979 98.5525 98.7908 83.7662 44.2998 65.8304 47.6132 0 0 0 g 0 0 0 0 0 0 38.8254 8.0385 3.56579 1.50134 0.68576 80.7578 0 0 0.820232 1.33709 6.74912 8.32313 0 0 0 t 0 0 0 0 0 0 9.21697 13.4755 8.96182 2.57373 0.36305 5.70016 0.562927 1.20919 14.0807 12.4208 20.7774 26.9278 0 0 0

M02888_2.00_shift6 (KLF16)
; oligos_6nt_mkv4_m3 versus M02888_2.00 (KLF16); m=89/201; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.539494; ------gmCMCgCCCMC---- ; cor=; Ncor= a 0 0 0 0 0 0 21.8146 33.2964 3.5942 69.9939 3.85064 18.5102 0.493827 0.123305 0.925926 26.152 1.57094 0 0 0 0 c 0 0 0 0 0 0 17.5237 59.5713 93.4493 28.0584 94.049 6.4432 99.5062 99.3835 93.287 70.3172 79.136 0 0 0 0 g 0 0 0 0 0 0 52.8005 2.84553 0.347826 1.94766 0.991832 60.0372 0 0.493218 0.173611 1.13704 1.12911 0 0 0 0 t 0 0 0 0 0 0 7.86112 4.28677 2.6087 0 1.10852 15.0093 0 0 5.61343 2.39378 18.164 0 0 0 0

M08978_2.00_shift1 (M08978_2.00)
; oligos_6nt_mkv4_m3 versus M08978_2.00; m=90/201; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.53675; -cscysgCCCCgCCCccyccc ; cor=; Ncor= a 0 12.6205 11.5512 11.6114 15.9639 20.5271 9.27711 3.70482 5.63253 10.6325 3.10241 8.73494 0.451807 0.993976 0.421687 16.5964 7.37952 11.5211 11.2952 13.1175 14.7364 c 0 44.9849 45.5572 51.5813 44.9849 31.5512 23.9157 73.4639 71.9277 87.1687 89.0211 5.06024 96.6265 97.741 85.4819 63.8253 55.4669 38.9307 43.9006 47.4849 41.8599 g 0 24.1867 26.506 16.747 13.2982 36.7169 55.3916 13.3133 3.49398 1.4759 3.43373 62.756 1.95783 1.0241 0.240964 7.5 19.9699 21.9277 22.003 21.8373 22.6431 t 0 18.2078 16.3855 20.0602 25.753 11.2048 11.4157 9.51807 18.9458 0.722892 4.44277 23.4488 0.963855 0.240964 13.8554 12.0783 17.1837 27.6205 22.8012 17.5602 20.7605

M08920_2.00_shift1 (SP3,SP6)
; oligos_6nt_mkv4_m3 versus M08920_2.00 (SP3,SP6); m=91/201; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.53675; -cscysgCCCCgCCCccyccc ; cor=; Ncor= a 0 12.6205 11.5512 11.6114 15.9639 20.5271 9.27711 3.70482 5.63253 10.6325 3.10241 8.73494 0.451807 0.993976 0.421687 16.5964 7.37952 11.5211 11.2952 13.1175 14.7364 c 0 44.9849 45.5572 51.5813 44.9849 31.5512 23.9157 73.4639 71.9277 87.1687 89.0211 5.06024 96.6265 97.741 85.4819 63.8253 55.4669 38.9307 43.9006 47.4849 41.8599 g 0 24.1867 26.506 16.747 13.2982 36.7169 55.3916 13.3133 3.49398 1.4759 3.43373 62.756 1.95783 1.0241 0.240964 7.5 19.9699 21.9277 22.003 21.8373 22.6431 t 0 18.2078 16.3855 20.0602 25.753 11.2048 11.4157 9.51807 18.9458 0.722892 4.44277 23.4488 0.963855 0.240964 13.8554 12.0783 17.1837 27.6205 22.8012 17.5602 20.7605

M08878_2.00_shift4 (ZBTB17)
; oligos_6nt_mkv4_m3 versus M08878_2.00 (ZBTB17); m=92/201; ncol2=19; w=-4; offset=-4; strand=D; shift=4; score=0.532394; ----yykYCCcTCCCCCwccy ; cor=; Ncor= a 0 0 0 0 12 18.6 6 2.6 2 4.6 23.2 10.2 0.4 5.2 4.4 9 0.8 45.8 9.2 9.8 12.6 c 0 0 0 0 50.8 33.2 13.6 71 72.6 88.6 53.8 0.2 85 79 68.4 68 81.2 9.4 57.2 61 54 g 0 0 0 0 11.4 6.2 27.6 0.8 2.2 1.6 3.2 20 7.4 0.6 3.4 2.6 4 12.8 13.6 8 5.4 t 0 0 0 0 25.8 42 52.8 25.6 23.2 5.2 19.8 69.6 7.2 15.2 23.8 20.4 14 32 20 21.2 28

M08326_2.00_shift7 (SP2)
; oligos_6nt_mkv4_m3 versus M08326_2.00 (SP2); m=93/201; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.531554; -------cCCCGCCCc----- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.083612 6.77258 2.42475 0.083612 6.43813 0.083612 0.083612 0.083612 22.4916 0 0 0 0 0 c 0 0 0 0 0 0 0 63.6288 74.3311 97.408 99.7492 0.083612 99.7492 99.7492 99.7492 64.9666 0 0 0 0 0 g 0 0 0 0 0 0 0 14.7993 0.083612 0.083612 0.083612 93.3946 0.083612 0.083612 0.083612 1.08696 0 0 0 0 0 t 0 0 0 0 0 0 0 21.4883 18.8127 0.083612 0.083612 0.083612 0.083612 0.083612 0.083612 11.4548 0 0 0 0 0

M07615_2.00_shift9 (ZNF641)
; oligos_6nt_mkv4_m3 versus M07615_2.00 (ZNF641); m=94/201; ncol2=9; w=0; offset=1; strand=D; shift=9; score=0.530301; ---------ACCCCCCCA--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 99.6073 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 79.712 0 0 0 c 0 0 0 0 0 0 0 0 0 0.13089 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 20.0262 0 0 0 g 0 0 0 0 0 0 0 0 0 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0 0 0 t 0 0 0 0 0 0 0 0 0 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0 0 0

M04509_2.00_shift6 (ZNF281)
; oligos_6nt_mkv4_m3 versus M04509_2.00 (ZNF281); m=95/201; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.528673; ------gCCCCTCCCCCa--- ; cor=; Ncor= a 0 0 0 0 0 0 11.2647 2.15385 4.33229 0.138504 6.92892 2.06233 0 1.67286 3.41696 3.75881 5.06993 67.5349 0 0 0 c 0 0 0 0 0 0 14.7892 92.2198 93.9705 98.2918 91.0148 0 99.8126 98.3271 91.263 81.9107 92.5699 23.0233 0 0 0 g 0 0 0 0 0 0 61.2647 0.835165 1.25056 0 0.49173 0 0.0937207 0 1.25433 5.91229 0 1.67442 0 0 0 t 0 0 0 0 0 0 12.6814 4.79121 0.446628 1.56971 1.5646 97.9377 0.0937207 0 4.06574 8.41817 2.36014 7.76744 0 0 0

M04518_2.00_shift6 (SP6,SP8)
; oligos_6nt_mkv4_m3 versus M04518_2.00 (SP6,SP8); m=96/201; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.528033; ------rcCACGCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 0 28.6296 24.4087 12.157 82.827 0 6.50407 0 0 0.384123 42.989 10.6603 18.6959 0 0 0 c 0 0 0 0 0 0 10.7998 49.3961 68.1834 16.2447 100 0 99.6953 99.5941 83.7815 43.2967 62.1925 41.0087 0 0 0 g 0 0 0 0 0 0 48.4972 9.1847 10.1077 0 0 88.6631 0 0.405885 0.810926 0.659341 4.57488 11.6658 0 0 0 t 0 0 0 0 0 0 12.0734 17.0106 9.55193 0.92827 0 4.83288 0.304723 0 15.0235 13.0549 22.5723 28.6296 0 0 0

M10300_2.00_shift5 (SP1)
; oligos_6nt_mkv4_m3 versus M10300_2.00 (SP1); m=97/201; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.522679; -----vrcCCCGCCCccy--- ; cor=; Ncor= a 0 0 0 0 0 25 26.8519 8.33333 5.55556 7.40741 1.85185 8.33333 0 0 0.925926 17.5926 7.40741 18.5185 0 0 0 c 0 0 0 0 0 29.6296 19.4444 66.6667 70.3704 91.6667 91.6667 0 98.1481 100 82.4074 60.1852 51.8519 32.4074 0 0 0 g 0 0 0 0 0 37.037 50.9259 9.25926 4.62963 0.925926 4.62963 74.0741 1.85185 0 0.925926 9.25926 18.5185 19.4444 0 0 0 t 0 0 0 0 0 8.33333 2.77778 15.7407 19.4444 0 1.85185 17.5926 0 0 15.7407 12.963 22.2222 29.6296 0 0 0

M02879_2.00_shift3 (SP4)
; oligos_6nt_mkv4_m3 versus M02879_2.00 (SP4); m=98/201; ncol2=17; w=-5; offset=-5; strand=D; shift=3; score=0.521841; ---ywrGCCACGCCCmCtyy- ; cor=; Ncor= a 0 0 0 13.8895 51.7012 56.719 16.3731 5.52369 0.0431593 75.1376 0.0428816 0.181061 0.0426712 0.0633312 0 42.3378 2.06317 21.4528 13.7621 22.9582 0 c 0 0 0 31.4247 3.71163 3.18499 0.104621 94.3913 96.9357 24.7874 99.9571 0.253485 99.872 99.8944 98.4184 55.9135 78.0719 16.8799 28.5174 28.0152 0 g 0 0 0 18.4075 1.54651 35.7548 83.2432 0 0.107898 0.0750375 0 98.5696 0.0853424 0.0422208 0.0632644 0.207087 0.383422 4.40346 8.58359 13.2004 0 t 0 0 0 36.2782 43.0407 4.34119 0.278989 0.0849798 2.91325 0 0 0.995836 0 0 1.51835 1.54165 19.4815 57.2638 49.1369 35.8262 0

M08096_2.00_shift6 (SP1)
; oligos_6nt_mkv4_m3 versus M08096_2.00 (SP1); m=99/201; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.521624; ------gCCCCkCCCCy---- ; cor=; Ncor= a 0 0 0 0 0 0 9.81223 0 1.1335 0 0 15.5599 0 0 0 12.0678 7.46508 0 0 0 0 c 0 0 0 0 0 0 20.4488 71.1587 76.746 100 99.1642 0 100 100 76.4713 72.7845 56.8926 0 0 0 0 g 0 0 0 0 0 0 48.9008 7.35058 0 0 0 52.9425 0 0 0 0 8.40394 0 0 0 0 t 0 0 0 0 0 0 20.8381 21.4907 22.1204 0 0.835814 31.4976 0 0 23.5287 15.1477 27.2384 0 0 0 0

M02020_2.00_rc_shift11 (GCM1_rc)
; oligos_6nt_mkv4_m3 versus M02020_2.00_rc (GCM1_rc); m=100/201; ncol2=9; w=0; offset=3; strand=R; shift=11; score=0.521198; -----------rCCcgyAys- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 39.1855 3.28618 3.79436 15.4402 13.2393 4.5763 70.7382 6.1454 21.3885 0 c 0 0 0 0 0 0 0 0 0 0 0 13.3072 92.7332 92.1591 67.8281 20.7634 50.9523 7.02157 26.9964 32.2286 0 g 0 0 0 0 0 0 0 0 0 0 0 34.0663 1.66484 2.32453 7.36675 52.625 15.6566 12.6668 21.4495 28.8715 0 t 0 0 0 0 0 0 0 0 0 0 0 13.441 2.31573 1.72205 9.36497 13.3724 28.8148 9.57338 45.4087 17.5114 0

M08287_2.00_shift13 (PATZ1)
; oligos_6nt_mkv4_m3 versus M08287_2.00 (PATZ1); m=101/201; ncol2=8; w=0; offset=5; strand=D; shift=13; score=0.519373; -------------CCCCkCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.7333 0 0 22.1333 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 94.1333 81.0667 100 100 0 100 100 84 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35.2 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 5.8667 11.2 0 0 42.6667 0 0 16

M04646_2.00_shift6 (SP6,SP9)
; oligos_6nt_mkv4_m3 versus M04646_2.00 (SP6,SP9); m=102/201; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.518352; ------rcCACGCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 0 33.7393 14.4853 8.6369 82.2039 0 9.06832 0 2.87278 0 47.0257 6.99482 17.1203 0 0 0 c 0 0 0 0 0 0 9.67049 64.9744 81.9624 15.4979 99.2883 0 98.5169 95.4172 84.1375 40.3882 67.8756 45.8453 0 0 0 g 0 0 0 0 0 0 50 5.49604 4.52409 0 0 86.646 0.353107 1.70999 1.62847 0.939261 2.65544 6.94842 0 0 0 t 0 0 0 0 0 0 6.59026 15.0442 4.87662 2.29817 0.711744 4.28571 1.12994 0 14.234 11.6468 22.4741 30.086 0 0 0

M00622_2.00_shift12 (M00622_2.00)
; oligos_6nt_mkv4_m3 versus M00622_2.00; m=103/201; ncol2=8; w=0; offset=4; strand=D; shift=12; score=0.51801; ------------CgCCCmCg- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 4.20133 13.3489 0.0302663 0.0302663 0.0302663 57.5363 0.0302663 16.6805 0 c 0 0 0 0 0 0 0 0 0 0 0 0 91.5557 23.3356 99.9092 99.9092 96.8826 33.3232 99.9092 8.36106 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0.0415973 56.6245 0.0302663 0.0302663 0.0302663 9.11017 0.0302663 66.5973 0 t 0 0 0 0 0 0 0 0 0 0 0 0 4.20133 6.69108 0.0302663 0.0302663 3.0569 0.0302663 0.0302663 8.36106 0

M04883_2.00_rc_shift10 (GCM1_rc)
; oligos_6nt_mkv4_m3 versus M04883_2.00_rc (GCM1_rc); m=104/201; ncol2=9; w=0; offset=2; strand=R; shift=10; score=0.517762; ----------yaCCCgCAy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 11.0903 52.4494 3.34873 7.45679 15.0973 9.88885 0 80.3804 0 0 0 c 0 0 0 0 0 0 0 0 0 0 46.9782 16.4272 92.7252 79.3086 84.4819 18.6662 81.1931 14.5145 42.732 0 0 g 0 0 0 0 0 0 0 0 0 0 14.9533 19.6604 0.866051 7.7037 0 61.5562 1.11223 3.2032 6.24635 0 0 t 0 0 0 0 0 0 0 0 0 0 26.9782 11.4631 3.06005 5.53086 0.420831 9.88885 17.6946 1.9019 51.0216 0 0

M02921_2.00_shift6 (SP1)
; oligos_6nt_mkv4_m3 versus M02921_2.00 (SP1); m=105/201; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.517722; ------rCCmCrCCCmc---- ; cor=; Ncor= a 0 0 0 0 0 0 46.3014 19.2941 6.62971 47.0964 0.606612 30.0733 0 0.183038 0.127065 38.9714 17.6778 0 0 0 0 c 0 0 0 0 0 0 2.23634 70.7016 75.4216 47.7062 99.0294 0.867355 99.6642 99.6034 82.9733 47.5875 51.7187 0 0 0 0 g 0 0 0 0 0 0 43.205 3.37809 1.8711 4.96516 0.181984 48.8261 0.030525 0.0610128 0 1.56416 10.4546 0 0 0 0 t 0 0 0 0 0 0 8.25724 6.62625 16.0776 0.232288 0.181984 20.2333 0.30525 0.152532 16.8996 11.877 20.1489 0 0 0 0

M02898_2.00_shift6 (SP6,SP8)
; oligos_6nt_mkv4_m3 versus M02898_2.00 (SP6,SP8); m=106/201; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.516638; ------rmCACgCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 0 31.1377 31.5789 12.1951 78.6982 3.88889 9.32836 2.77778 1.16279 0 51.1364 5.41667 18.6747 0 0 0 c 0 0 0 0 0 0 16.1677 66.0819 81.4634 19.5266 92.7778 13.806 92.7778 97.093 89.7849 43.75 69.5833 31.3253 0 0 0 g 0 0 0 0 0 0 46.7066 0 0 0.591716 0.555556 62.3134 3.33333 1.74419 2.15054 3.40909 8.75 0.60241 0 0 0 t 0 0 0 0 0 0 5.98802 2.33918 6.34146 1.18343 2.77778 14.5522 1.11111 0 8.06452 1.70455 16.25 49.3976 0 0 0

M06117_2.00_shift6 (SP6)
; oligos_6nt_mkv4_m3 versus M06117_2.00 (SP6); m=107/201; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.513605; ------gmymCGCCCmc---- ; cor=; Ncor= a 0 0 0 0 0 0 18.1818 27.2727 0 54.5455 0 4.54545 4.54545 0 0 54.5455 4.54545 0 0 0 0 c 0 0 0 0 0 0 4.54545 45.4545 59.0909 45.4545 100 0 95.4545 100 86.3636 31.8182 63.6364 0 0 0 0 g 0 0 0 0 0 0 59.0909 9.09091 0 0 0 86.3636 0 0 0 0 13.6364 0 0 0 0 t 0 0 0 0 0 0 18.1818 18.1818 40.9091 0 0 9.09091 0 0 13.6364 13.6364 18.1818 0 0 0 0

M02930_2.00_shift5 (KLF14)
; oligos_6nt_mkv4_m3 versus M02930_2.00 (KLF14); m=108/201; ncol2=14; w=-3; offset=-3; strand=D; shift=5; score=0.51269; -----krcCACGCCCmYyt-- ; cor=; Ncor= a 0 0 0 0 0 18.6632 33.2047 22.0453 0 89.5648 0.125 2.2439 0 0 0 41.8958 1.54664 13.9721 19.2353 0 0 c 0 0 0 0 0 9.3316 2.01157 56.9992 86.1066 7.13162 99.75 1.17073 99.8131 99.442 95.888 56.2317 70.7105 29.6407 21.9621 0 0 g 0 0 0 0 0 41.9271 62.8272 4.02347 0.538503 3.04143 0 95.5772 0.186916 0.185989 0.238379 0.0585138 0.724988 4.44112 9.30646 0 0 t 0 0 0 0 0 30.0781 1.95646 16.9321 13.3549 0.262192 0.125 1.00813 0 0.371978 3.87366 1.81393 27.0179 51.9461 49.4961 0 0

M04657_2.00_shift5 (KLF14)
; oligos_6nt_mkv4_m3 versus M04657_2.00 (KLF14); m=109/201; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.512176; -----srcCaCGCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 24.251 42.2284 16.4532 5.29267 65.2909 2.21104 18.4092 0.217797 0.265128 0.689655 35.1905 10.5908 19.8902 0 0 0 c 0 0 0 0 0 26.5725 11.9261 63.3006 87.1854 18.7423 97.2095 2.73727 99.1755 99.423 86.2069 52.5107 61.7582 39.8745 0 0 0 g 0 0 0 0 0 28.5961 38.409 8.59895 1.31291 11.4093 0.21348 71.5167 0.0777847 0.311915 0.351589 1.89847 6.2606 13.3804 0 0 0 t 0 0 0 0 0 20.5804 7.43645 11.6473 6.20897 4.55756 0.365965 7.33677 0.528936 0 12.7519 10.4003 21.3904 26.8549 0 0 0

M04455_2.00_shift7 (KLF2)
; oligos_6nt_mkv4_m3 versus M04455_2.00 (KLF2); m=110/201; ncol2=11; w=-1; offset=-1; strand=D; shift=7; score=0.51161; -------srCCmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 0 22.804 40.76 11.9439 7.29676 56.6352 0 33.6164 0 2.58377 1.29796 39.7663 0 0 0 c 0 0 0 0 0 0 0 29.7707 17.9117 74.5003 83.6864 27.754 98.3404 5.41181 98.4871 93.2983 88.2229 24.7079 0 0 0 g 0 0 0 0 0 0 0 28.5591 34.2968 7.97872 3.36773 12.9886 0 57.6733 1.04411 3.93621 2.0042 8.41627 0 0 0 t 0 0 0 0 0 0 0 18.8663 7.0315 5.57705 5.6491 2.62223 1.65957 3.29844 0.468783 0.181671 8.4749 27.1095 0 0 0

M07565_2.00_rc_shift4 (ZNF506_rc)
; oligos_6nt_mkv4_m3 versus M07565_2.00_rc (ZNF506_rc); m=111/201; ncol2=18; w=-4; offset=-4; strand=R; shift=4; score=0.510697; ----tGgrbGAGCCCCCArar ; cor=; Ncor= a 0 0 0 0 21.0358 4.66752 13.1074 48.6573 3.90026 7.22506 99.8082 0.0639386 0.0639386 0.831202 1.85422 2.62148 5.94629 86.2532 39.1944 44.821 26.9182 c 0 0 0 0 20.5243 5.94629 8.75959 22.0588 37.4041 3.13299 0.0639386 0.319693 98.5294 95.2046 94.6931 94.1816 88.555 1.34271 13.1074 23.5934 17.9668 g 0 0 0 0 22.3146 78.8363 56.8414 25.3836 26.4066 79.3478 0.0639386 99.5524 0.575448 0.319693 0.0639386 0.0639386 0.575448 8.24808 41.2404 19.5013 30.7545 t 0 0 0 0 36.1253 10.5499 21.2916 3.90026 32.289 10.2941 0.0639386 0.0639386 0.831202 3.6445 3.38875 3.13299 4.92327 4.15601 6.4578 12.0844 24.3606

M00223_2.00_shift8 (KLF1)
; oligos_6nt_mkv4_m3 versus M00223_2.00 (KLF1); m=112/201; ncol2=9; w=0; offset=0; strand=D; shift=8; score=0.510254; --------wwybmCCCC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.7492 26.1893 24.8111 20.2632 32.7309 7.58489 13.0131 16.1177 2.67489 0 0 0 0 c 0 0 0 0 0 0 0 0 24.0083 24.9121 25.3123 28.4688 30.2144 70.5385 84.4328 79.037 78.5636 0 0 0 0 g 0 0 0 0 0 0 0 0 24.4933 23.2279 24.5642 25.2495 23.0651 0.417345 1.38535 4.22034 1.05539 0 0 0 0 t 0 0 0 0 0 0 0 0 25.7492 25.6707 25.3123 26.0185 13.9897 21.4593 1.16877 0.62495 17.7061 0 0 0 0

M08982_2.00_shift2 (M08982_2.00)
; oligos_6nt_mkv4_m3 versus M08982_2.00; m=113/201; ncol2=19; w=-6; offset=-6; strand=D; shift=2; score=0.507352; --cccrgCCCCrCCChycycc ; cor=; Ncor= a 0 0 13.8554 13.4538 16.8675 27.3092 14.8594 7.02811 4.21687 24.498 0.401606 27.1084 0.200803 0.200803 0 25.1004 11.0442 7.22892 11.245 8.83534 12.6506 c 0 0 48.1928 53.012 49.5984 16.2651 14.8594 84.3373 75.502 72.49 98.1928 0 98.5944 99.1968 96.5863 35.9438 31.5261 49.5984 42.3695 46.1847 47.1888 g 0 0 21.8876 24.2972 20.4819 38.1526 61.8474 1.00402 1.80723 2.61044 0.60241 64.257 0.803213 0 0 4.41767 24.6988 18.6747 20.4819 22.2892 18.8755 t 0 0 16.0643 9.23695 13.0522 18.2731 8.43373 7.63052 18.4739 0.401606 0.803213 8.63454 0.401606 0.60241 3.41365 34.5382 32.7309 24.498 25.9036 22.6908 21.2851

M08876_2.00_shift2 (KLF3)
; oligos_6nt_mkv4_m3 versus M08876_2.00 (KLF3); m=114/201; ncol2=19; w=-6; offset=-6; strand=D; shift=2; score=0.507352; --cccrgCCCCrCCChycycc ; cor=; Ncor= a 0 0 13.8554 13.4538 16.8675 27.3092 14.8594 7.02811 4.21687 24.498 0.401606 27.1084 0.200803 0.200803 0 25.1004 11.0442 7.22892 11.245 8.83534 12.6506 c 0 0 48.1928 53.012 49.5984 16.2651 14.8594 84.3373 75.502 72.49 98.1928 0 98.5944 99.1968 96.5863 35.9438 31.5261 49.5984 42.3695 46.1847 47.1888 g 0 0 21.8876 24.2972 20.4819 38.1526 61.8474 1.00402 1.80723 2.61044 0.60241 64.257 0.803213 0 0 4.41767 24.6988 18.6747 20.4819 22.2892 18.8755 t 0 0 16.0643 9.23695 13.0522 18.2731 8.43373 7.63052 18.4739 0.401606 0.803213 8.63454 0.401606 0.60241 3.41365 34.5382 32.7309 24.498 25.9036 22.6908 21.2851

M05859_2.00_shift5 (M05859_2.00)
; oligos_6nt_mkv4_m3 versus M05859_2.00; m=115/201; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.506838; -----rGccmCGCCCmyw--- ; cor=; Ncor= a 0 0 0 0 0 33 17.4 21.7 14.9 52.9 0.2 5.5 0.1 0.1 0.1 43.2 12.8 29.7 0 0 0 c 0 0 0 0 0 9.2 1.9 44.6 64.8 46.8 99.3 0.3 99.6 99.6 80.6 38.7 41.1 15.7 0 0 0 g 0 0 0 0 0 35.6 71.1 14.9 2.1 0.2 0.2 87.3 0.1 0.1 0.1 0.7 13.2 18.1 0 0 0 t 0 0 0 0 0 22.2 9.5 18.8 18.2 0.1 0.3 6.9 0.1 0.1 19.2 17.4 32.9 36.5 0 0 0

M04538_2.00_shift5 (KLF13)
; oligos_6nt_mkv4_m3 versus M04538_2.00 (KLF13); m=116/201; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.504856; -----crCCACRCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 19.2843 33.2076 18.5758 1.25656 80.2155 0 28.5787 0 0.126017 0.0174972 33.8885 5.28546 18.457 0 0 0 c 0 0 0 0 0 37.2752 4.84968 74.7925 96.574 13.6604 100 0 100 99.7862 91.4439 59.5032 76.796 44.2501 0 0 0 g 0 0 0 0 0 21.3509 58.8905 2.47009 1.45613 5.61149 0 69.5658 0 0.0305495 0.139978 0.45747 1.64547 9.06969 0 0 0 t 0 0 0 0 0 22.0896 3.0522 4.16166 0.713283 0.512647 0 1.85555 0 0.0572803 8.39866 6.15082 16.2731 28.2232 0 0 0

M04813_2.00_shift11 (FOXO3,FOXP4)
; oligos_6nt_mkv4_m3 versus M04813_2.00 (FOXO3,FOXP4); m=117/201; ncol2=11; w=0; offset=3; strand=D; shift=11; score=0.504587; -----------wtCCCCACAC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 28.87 17.2215 4.30622 10.1902 3.80952 0.0749064 95.7037 0.0762777 97.8047 6.91421 c 0 0 0 0 0 0 0 0 0 0 0 20.356 16.9108 88.3117 87.7717 94.652 96.779 0 98.5507 0.908403 82.7145 g 0 0 0 0 0 0 0 0 0 0 0 11.5325 8.52197 4.16951 0.475543 0 0 1.85185 0 1.2869 2.56082 t 0 0 0 0 0 0 0 0 0 0 0 39.2415 57.3458 3.21258 1.5625 1.53846 3.14607 2.44444 1.373 0 7.8105

M04537_2.00_shift5 (KLF13)
; oligos_6nt_mkv4_m3 versus M04537_2.00 (KLF13); m=118/201; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.503868; -----crCCACRCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 23.8837 39.5377 16.4845 4.1606 76.1744 0.202505 25.201 0.217115 0.321351 0.192691 39.3057 7.57222 19.0559 0 0 0 c 0 0 0 0 0 31.1724 11.4831 71.5224 92.0949 21.3192 99.61 0.889699 99.431 99.2527 91.3977 51.1096 70.0514 40.3629 0 0 0 g 0 0 0 0 0 24.2527 43.8909 6.20389 0.811317 1.99025 0 71.1813 0.164708 0.246618 0.144519 0.680735 3.81613 13.0402 0 0 0 t 0 0 0 0 0 20.6912 5.08826 5.78922 2.93322 0.516203 0.187505 2.72805 0.187168 0.179359 8.26509 8.90402 18.5603 27.541 0 0 0

M04540_2.00_shift5 (KLF13)
; oligos_6nt_mkv4_m3 versus M04540_2.00 (KLF13); m=119/201; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.503668; -----crCCACrCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 20.513 34.9546 17.3045 1.51246 75.5084 0 30.9757 0.0176134 0.364275 0.154971 35.7388 6.61041 18.839 0 0 0 c 0 0 0 0 0 34.234 4.11928 76.293 95.8513 18.075 99.9119 0 99.9031 99.5743 90.1534 55.83 73.1145 43.0158 0 0 0 g 0 0 0 0 0 22.3246 57.854 2.4346 1.62653 5.56794 0 65.2592 0.00440335 0.0351108 0.107288 0.799128 2.66336 10.2878 0 0 0 t 0 0 0 0 0 22.9284 3.07208 3.96799 1.00972 0.84867 0.0880747 3.76517 0.0748569 0.0263331 9.58436 7.63208 17.6118 27.8574 0 0 0

M04559_2.00_shift5 (SP3,SP6)
; oligos_6nt_mkv4_m3 versus M04559_2.00 (SP3,SP6); m=120/201; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.501653; -----sgCCMCGCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 18.12 23.453 11.418 5.5243 73.9408 0 14.5351 0 0 0.185874 48.8032 4.24892 21.0642 0 0 0 c 0 0 0 0 0 30.96 6.35643 77.1332 85.2344 25.9592 100 0 99.4628 100 84.4711 42.5361 75.2961 41.0082 0 0 0 g 0 0 0 0 0 26.08 60.8498 3.00879 1.15942 0.019984 0 70.9581 0.0198965 0 0 0.511602 1.74845 7.9816 0 0 0 t 0 0 0 0 0 24.84 9.34075 8.44006 8.08184 0.0799361 0 14.5067 0.51731 0 15.343 8.1491 18.7065 29.946 0 0 0

M02910_2.00_shift6 (SP3,SP6)
; oligos_6nt_mkv4_m3 versus M02910_2.00 (SP3,SP6); m=121/201; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.500555; ------sCCACrCCCmc---- ; cor=; Ncor= a 0 0 0 0 0 0 22.3999 17.6351 8.55439 71.6826 2.25957 26.1176 2.06696 2.5942 0.957055 43.3481 12.7548 0 0 0 0 c 0 0 0 0 0 0 30.0549 70.9806 83.8812 23.8364 93.3343 3.89076 96.2009 95.7826 81.092 45.3752 55.8995 0 0 0 0 g 0 0 0 0 0 0 35.5782 4.23155 3.17299 2.67418 1.2004 55.5378 0.55313 0.768116 1.5092 2.34931 9.05016 0 0 0 0 t 0 0 0 0 0 0 11.9671 7.15283 4.39142 1.80688 3.20576 14.4538 1.17904 0.855072 16.4417 8.92737 22.2955 0 0 0 0

M00168_2.00_rc_shift11 (M00168_2.00_rc)
; oligos_6nt_mkv4_m3 versus M00168_2.00_rc; m=122/201; ncol2=9; w=0; offset=3; strand=R; shift=11; score=0.499645; -----------rCCCgyAts- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 45.486 1.31302 0.999588 16.3509 11.5638 0.5584 72.8632 8.18295 24.1803 0 c 0 0 0 0 0 0 0 0 0 0 0 11.1051 97.742 97.4742 69.0122 19.8435 54.9993 6.61 20.3291 27.2632 0 g 0 0 0 0 0 0 0 0 0 0 0 31.7345 0.383787 1.01978 6.01516 52.3462 14.258 10.2634 18.3945 26.4574 0 t 0 0 0 0 0 0 0 0 0 0 0 11.6745 0.561205 0.506408 8.62171 16.2465 30.1843 10.2634 53.0934 22.0991 0

M08879_2.00_shift6 (KLF12)
; oligos_6nt_mkv4_m3 versus M08879_2.00 (KLF12); m=123/201; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.498971; ------GCCCCGCCCck---- ; cor=; Ncor= a 0 0 0 0 0 0 3.9823 1.54867 3.9823 19.469 1.54867 2.87611 0 0.221239 0.442478 13.9381 8.40708 0 0 0 0 c 0 0 0 0 0 0 2.87611 96.4602 86.2832 79.2035 96.0177 0.221239 100 99.5575 93.1416 58.1858 19.469 0 0 0 0 g 0 0 0 0 0 0 80.0885 0.663717 0 0.884956 0.221239 87.8319 0 0.221239 0 3.09735 34.292 0 0 0 0 t 0 0 0 0 0 0 13.0531 1.32743 9.73451 0.442478 2.21239 9.0708 0 0 6.41593 24.7788 37.8319 0 0 0 0

M04558_2.00_shift5 (SP3,SP6)
; oligos_6nt_mkv4_m3 versus M04558_2.00 (SP3,SP6); m=124/201; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.498815; -----srCCACGCCCmCy--- ; cor=; Ncor= a 0 0 0 0 0 19.2232 28.4502 8.48454 2.28343 79.5427 0.0907853 6.15079 0 0 0.0273486 47.7649 7.4691 23.0011 0 0 0 c 0 0 0 0 0 28.5844 7.03964 84.2193 94.0631 20.2604 99.7276 0 100 99.8636 90.1272 44.005 68.7265 39.5691 0 0 0 g 0 0 0 0 0 28.7513 58.9288 2.88781 0.770658 0.0302847 0 87.1825 0 0 0.0273486 0.5431 3.98979 7.95024 0 0 0 t 0 0 0 0 0 23.4411 5.58133 4.40838 2.88283 0.166566 0.181571 6.66667 0 0.136364 9.81813 7.68695 19.8146 29.4796 0 0 0

M04539_2.00_shift5 (KLF13)
; oligos_6nt_mkv4_m3 versus M04539_2.00 (KLF13); m=125/201; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.497251; -----crCCACRCCCmcy--- ; cor=; Ncor= a 0 0 0 0 0 24.9894 44.4014 16.781 3.06778 77.518 0 26.2894 0 0.0653218 0.0643522 40.4336 10.1436 21.3777 0 0 0 c 0 0 0 0 0 30.6089 5.35247 71.8852 95.402 20.7138 99.8425 0.0713267 99.9423 99.8963 88.0542 48.9039 64.5221 37.6938 0 0 0 g 0 0 0 0 0 24.2355 46.3741 5.50241 0.245863 1.4163 0 71.3212 0 0.0384246 0.0779001 0.436396 4.42612 15.4967 0 0 0 t 0 0 0 0 0 20.1662 3.87207 5.83144 1.28436 0.35184 0.157456 2.31812 0.0576635 0 11.8036 10.2261 20.9082 25.4317 0 0 0

M08975_2.00_shift2 (M08975_2.00)
; oligos_6nt_mkv4_m3 versus M08975_2.00; m=126/201; ncol2=20; w=-6; offset=-6; strand=D; shift=2; score=0.496332; --yyyggCyCCGCCycytkcy ; cor=; Ncor= a 0 0 9.41884 8.61723 23.0461 21.2425 6.21242 2.80561 5.01002 6.61323 7.21443 9.61924 2.40481 1.80361 2.20441 11.4228 7.81563 13.6273 9.61924 7.41483 12.2244 c 0 0 43.0862 49.8998 36.4729 12.4248 14.2285 74.7495 56.7134 86.1723 85.5711 1.002 93.5872 90.1804 61.523 63.7275 54.9098 22.4449 24.8497 60.521 46.2926 g 0 0 14.2285 11.2224 7.81563 41.483 59.7194 1.002 3.00601 1.80361 1.60321 76.9539 0.400802 1.2024 2.00401 1.80361 2.60521 11.2224 25.0501 18.0361 14.8297 t 0 0 33.2665 30.2605 32.6653 24.8497 19.8397 21.4429 35.2705 5.41082 5.61122 12.4248 3.60721 6.81363 34.2685 23.0461 34.6693 52.7054 40.481 14.0281 26.6533

M08873_2.00_shift2 (SP4)
; oligos_6nt_mkv4_m3 versus M08873_2.00 (SP4); m=127/201; ncol2=20; w=-6; offset=-6; strand=D; shift=2; score=0.496332; --yyyggCyCCGCCycytkcy ; cor=; Ncor= a 0 0 9.41884 8.61723 23.0461 21.2425 6.21242 2.80561 5.01002 6.61323 7.21443 9.61924 2.40481 1.80361 2.20441 11.4228 7.81563 13.6273 9.61924 7.41483 12.2244 c 0 0 43.0862 49.8998 36.4729 12.4248 14.2285 74.7495 56.7134 86.1723 85.5711 1.002 93.5872 90.1804 61.523 63.7275 54.9098 22.4449 24.8497 60.521 46.2926 g 0 0 14.2285 11.2224 7.81563 41.483 59.7194 1.002 3.00601 1.80361 1.60321 76.9539 0.400802 1.2024 2.00401 1.80361 2.60521 11.2224 25.0501 18.0361 14.8297 t 0 0 33.2665 30.2605 32.6653 24.8497 19.8397 21.4429 35.2705 5.41082 5.61122 12.4248 3.60721 6.81363 34.2685 23.0461 34.6693 52.7054 40.481 14.0281 26.6533

M00232_2.00_shift7 (EGR2)
; oligos_6nt_mkv4_m3 versus M00232_2.00 (EGR2); m=128/201; ncol2=10; w=-1; offset=-1; strand=D; shift=7; score=0.494512; -------hymCGCCChw---- ; cor=; Ncor= a 0 0 0 0 0 0 0 26.4929 23.7216 41.6576 1.19466 19.711 0.023716 2.89133 2.95969 28.9816 30.3556 0 0 0 0 c 0 0 0 0 0 0 0 26.2293 30.1561 45.1271 88.9307 0.0573363 98.3364 95.7476 72.6087 25.7044 19.163 0 0 0 0 g 0 0 0 0 0 0 0 17.4071 11.7798 4.01277 0.0208137 73.0525 0.0101366 0.853607 0.0193529 12.6374 21.6062 0 0 0 0 t 0 0 0 0 0 0 0 29.8707 34.3426 9.20257 9.85381 7.17913 1.6297 0.507487 24.4122 32.6766 28.8752 0 0 0 0

M00617_2.00_shift7 (M00617_2.00)
; oligos_6nt_mkv4_m3 versus M00617_2.00; m=129/201; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.493261; -------ccmCGCCCw----- ; cor=; Ncor= a 0 0 0 0 0 0 0 23.489 19.4417 52.2892 0.827505 19.3067 3.00723e-10 0.283087 0.101233 35.4676 0 0 0 0 0 c 0 0 0 0 0 0 0 38.3414 47.819 36.118 98.5594 3.09116e-07 99.9999 99.2854 80.6139 23.3039 0 0 0 0 0 g 0 0 0 0 0 0 0 14.6807 9.46331 5.97026 6.91425e-05 72.9993 3.40174e-19 0.430847 0.375188 8.48772 0 0 0 0 0 t 0 0 0 0 0 0 0 23.489 23.276 5.62258 0.61303 7.69407 0 0 18.9096 32.7408 0 0 0 0 0

M08991_2.00_shift9 (M08991_2.00)
; oligos_6nt_mkv4_m3 versus M08991_2.00; m=130/201; ncol2=9; w=0; offset=1; strand=D; shift=9; score=0.491162; ---------rmGmCCCyc--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 26 47.2 0.8 58.4 0.2 0 4.4 0.6 10.6 0 0 0 c 0 0 0 0 0 0 0 0 0 23.2 33.4 0.2 40.4 99 99.8 93.6 60.6 42.8 0 0 0 g 0 0 0 0 0 0 0 0 0 49.8 17.4 98.8 0 0.2 0 0 0.6 22.6 0 0 0 t 0 0 0 0 0 0 0 0 0 1 2 0.2 1.2 0.6 0.2 2 38.2 24 0 0 0

M08926_2.00_shift9 (ZBTB7A)
; oligos_6nt_mkv4_m3 versus M08926_2.00 (ZBTB7A); m=131/201; ncol2=9; w=0; offset=1; strand=D; shift=9; score=0.491162; ---------rmGmCCCyc--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 26 47.2 0.8 58.4 0.2 0 4.4 0.6 10.6 0 0 0 c 0 0 0 0 0 0 0 0 0 23.2 33.4 0.2 40.4 99 99.8 93.6 60.6 42.8 0 0 0 g 0 0 0 0 0 0 0 0 0 49.8 17.4 98.8 0 0.2 0 0 0.6 22.6 0 0 0 t 0 0 0 0 0 0 0 0 0 1 2 0.2 1.2 0.6 0.2 2 38.2 24 0 0 0

M08937_2.00_shift1 (WT1)
; oligos_6nt_mkv4_m3 versus M08937_2.00 (WT1); m=132/201; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.489264; -CycCycCyCCTCCYyCbCcy ; cor=; Ncor= a 0 2.6 5 3.8 6 9.2 5.6 1.2 3.8 4.4 1 2.2 0 1.2 0.8 6.2 1.4 14.6 3.8 7 7.2 c 0 68 47.2 67.4 75.2 38.8 51.6 71.4 38.6 90.8 97 0.4 97.2 95.6 71.4 59.6 80.4 27.6 76.2 56 51.4 g 0 8 10.8 9.4 6.8 21.4 18.6 3.6 10 1.2 0.8 14.8 1.6 2.6 2.6 5.2 8.4 30.4 11.2 16 10.2 t 0 21.4 37 19.4 12 30.6 24.2 23.8 47.6 3.6 1.2 82.6 1.2 0.6 25.2 29 9.8 27.4 8.8 21 31.2

M08968_2.00_shift1 (M08968_2.00)
; oligos_6nt_mkv4_m3 versus M08968_2.00; m=133/201; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.489264; -CycCycCyCCTCCYyCbCcy ; cor=; Ncor= a 0 2.6 5 3.8 6 9.2 5.6 1.2 3.8 4.4 1 2.2 0 1.2 0.8 6.2 1.4 14.6 3.8 7 7.2 c 0 68 47.2 67.4 75.2 38.8 51.6 71.4 38.6 90.8 97 0.4 97.2 95.6 71.4 59.6 80.4 27.6 76.2 56 51.4 g 0 8 10.8 9.4 6.8 21.4 18.6 3.6 10 1.2 0.8 14.8 1.6 2.6 2.6 5.2 8.4 30.4 11.2 16 10.2 t 0 21.4 37 19.4 12 30.6 24.2 23.8 47.6 3.6 1.2 82.6 1.2 0.6 25.2 29 9.8 27.4 8.8 21 31.2

M09505_2.00_shift12 (MAZ)
; oligos_6nt_mkv4_m3 versus M09505_2.00 (MAZ); m=134/201; ncol2=8; w=0; offset=4; strand=D; shift=12; score=0.486314; ------------CCCCcCCC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0.1 0.1 0.1 5.4 8.4 0.1 0.1 0 c 0 0 0 0 0 0 0 0 0 0 0 0 99.7 95.6 89.4 84.8 60.7 70.2 99.7 98.9 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0.1 5.8 6.1 14.9 8.2 0.1 0.1 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0.1 4.2 4.7 9 19 13.2 0.1 0.9 0

M08911_2.00_shift0 (SP2)
; oligos_6nt_mkv4_m3 versus M08911_2.00 (SP2); m=135/201; ncol2=22; w=-8; offset=-8; strand=D; shift=0; score=0.485156; scsccggcCCCGCCyCcyssc ; cor=; Ncor= a 5.59912 7.4692 9.40045 10.683 21.5907 20.8381 7.28292 1.99321 2.77539 3.27319 5.0971 5.40346 1.00615 3.93614 1.86169 9.81341 6.78515 10.5576 10.6237 6.24231 5.09449 c 49.492 58.9305 46.6039 52.6531 39.2593 23.3438 21.865 58.1706 78.6049 93.459 90.0299 1.28031 95.6927 91.8605 63.0486 70.6115 65.6845 38.4353 42.0573 50.4652 52.2944 g 32.6366 18.5491 25.794 23.6977 19.0192 50.8124 60.4696 17.7575 8.68857 2.01296 1.63721 88.9741 2.0841 0.424065 5.48717 5.57475 10.0101 22.2099 31.8687 28.2179 24.6121 t 12.2723 15.0512 18.2017 12.9662 20.1308 5.00571 10.3825 22.0787 9.93112 1.25486 3.23577 4.34209 1.21706 3.77932 29.6025 14.0003 17.5203 28.7972 15.4503 15.0745 17.999

M08970_2.00_shift0 (M08970_2.00)
; oligos_6nt_mkv4_m3 versus M08970_2.00; m=136/201; ncol2=22; w=-8; offset=-8; strand=D; shift=0; score=0.485156; scsccggcCCCGCCyCcyssc ; cor=; Ncor= a 5.59912 7.4692 9.40045 10.683 21.5907 20.8381 7.28292 1.99321 2.77539 3.27319 5.0971 5.40346 1.00615 3.93614 1.86169 9.81341 6.78515 10.5576 10.6237 6.24231 5.09449 c 49.492 58.9305 46.6039 52.6531 39.2593 23.3438 21.865 58.1706 78.6049 93.459 90.0299 1.28031 95.6927 91.8605 63.0486 70.6115 65.6845 38.4353 42.0573 50.4652 52.2944 g 32.6366 18.5491 25.794 23.6977 19.0192 50.8124 60.4696 17.7575 8.68857 2.01296 1.63721 88.9741 2.0841 0.424065 5.48717 5.57475 10.0101 22.2099 31.8687 28.2179 24.6121 t 12.2723 15.0512 18.2017 12.9662 20.1308 5.00571 10.3825 22.0787 9.93112 1.25486 3.23577 4.34209 1.21706 3.77932 29.6025 14.0003 17.5203 28.7972 15.4503 15.0745 17.999

M01917_2.00_rc_shift9 (M01917_2.00_rc)
; oligos_6nt_mkv4_m3 versus M01917_2.00_rc; m=137/201; ncol2=8; w=0; offset=1; strand=R; shift=9; score=0.483799; ---------tCCCCCCc---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 10.8757 6.35513 3.18153 0.801333 3.97493 2.38813 7.38283 7.34593 0 0 0 0 c 0 0 0 0 0 0 0 0 0 23.9135 78.5544 81.728 97.596 93.629 87.2818 68.0187 62.3716 0 0 0 0 g 0 0 0 0 0 0 0 0 0 17.3946 7.94192 8.73532 1.59473 2.38813 8.73532 20.4933 17.434 0 0 0 0 t 0 0 0 0 0 0 0 0 0 47.8162 7.14852 6.35513 0.00793399 0.00793399 1.59473 4.10521 12.8485 0 0 0 0

M04510_2.00_shift6 (ZNF281)
; oligos_6nt_mkv4_m3 versus M04510_2.00 (ZNF281); m=138/201; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.483111; ------rCCCmTCCCCCr--- ; cor=; Ncor= a 0 0 0 0 0 0 26.988 15.4793 12.0417 1.77179 33.1018 15.3637 4.31528 5.19077 15.1746 16.4008 6.88917 27.1103 0 0 0 c 0 0 0 0 0 0 6.55738 70.9328 80.4375 96.1729 59.0519 0.0777907 89.432 89.8181 71.7682 69.4927 86.564 11.3775 0 0 0 g 0 0 0 0 0 0 58.4781 7.34484 3.875 1.25207 4.72007 6.06768 3.941 3.54925 7.16939 6.30937 2.48181 49.3761 0 0 0 t 0 0 0 0 0 0 7.97651 6.24311 3.64583 0.803213 3.12628 78.4909 2.31176 1.44188 5.88782 7.7971 4.06504 12.136 0 0 0

M08857_2.00_shift6 (KLF6)
; oligos_6nt_mkv4_m3 versus M08857_2.00 (KLF6); m=139/201; ncol2=19; w=-2; offset=-2; strand=D; shift=6; score=0.47998; ------yyccmdgCCMCdCCC ; cor=; Ncor= a 0 0 0 0 0 0 5.24194 10.6855 6.45161 11.6935 25.8065 25 10.8871 4.6371 4.23387 26.0081 2.21774 28.2258 1.20968 2.01613 13.1048 c 0 0 0 0 0 0 45.5645 43.3468 60.2823 60.8871 52.2177 13.7097 20.7661 83.6694 68.3468 68.9516 85.4839 0 89.1129 95.5645 81.4516 g 0 0 0 0 0 0 23.3871 11.0887 17.1371 12.7016 15.7258 31.8548 45.3629 3.02419 6.45161 2.21774 0.604839 45.7661 5.24194 0 0.604839 t 0 0 0 0 0 0 25.8065 34.879 16.129 14.7177 6.25 29.4355 22.9839 8.66935 20.9677 2.82258 11.6935 26.0081 4.43548 2.41935 4.83871

M08962_2.00_shift6 (M08962_2.00)
; oligos_6nt_mkv4_m3 versus M08962_2.00; m=140/201; ncol2=19; w=-2; offset=-2; strand=D; shift=6; score=0.47998; ------yyccmdgCCMCdCCC ; cor=; Ncor= a 0 0 0 0 0 0 5.24194 10.6855 6.45161 11.6935 25.8065 25 10.8871 4.6371 4.23387 26.0081 2.21774 28.2258 1.20968 2.01613 13.1048 c 0 0 0 0 0 0 45.5645 43.3468 60.2823 60.8871 52.2177 13.7097 20.7661 83.6694 68.3468 68.9516 85.4839 0 89.1129 95.5645 81.4516 g 0 0 0 0 0 0 23.3871 11.0887 17.1371 12.7016 15.7258 31.8548 45.3629 3.02419 6.45161 2.21774 0.604839 45.7661 5.24194 0 0.604839 t 0 0 0 0 0 0 25.8065 34.879 16.129 14.7177 6.25 29.4355 22.9839 8.66935 20.9677 2.82258 11.6935 26.0081 4.43548 2.41935 4.83871

M04457_2.00_shift6 (KLF16)
; oligos_6nt_mkv4_m3 versus M04457_2.00 (KLF16); m=141/201; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.479606; ------rcCmCgCCCm----- ; cor=; Ncor= a 0 0 0 0 0 0 32.0237 21.6005 9.64297 56.0179 0 23.6651 2.08927 5.70598 7.5165 27.5834 0 0 0 0 0 c 0 0 0 0 0 0 22.5292 57.0911 77.8929 27.5676 97.7205 13.1345 92.8205 88.8061 78.6577 52.9773 0 0 0 0 0 g 0 0 0 0 0 0 35.8502 11.3551 4.04845 9.23888 0 56.8721 1.82336 3.18008 3.21906 3.76509 0 0 0 0 0 t 0 0 0 0 0 0 9.59689 9.95327 8.41568 7.17561 2.27954 6.32828 3.26686 2.30783 10.6068 15.6742 0 0 0 0 0

M07929_2.00_shift0 (EGR1)
; oligos_6nt_mkv4_m3 versus M07929_2.00 (EGR1); m=142/201; ncol2=20; w=-8; offset=-8; strand=D; shift=0; score=0.476049; ccsccssccCCGCCCmCGCm- ; cor=; Ncor= a 13.9394 15.1515 12.7273 16.9697 17.1717 18.1818 10.101 16.9697 13.5354 18.3838 0.404 19.798 0 0 0 51.5151 0 7.0707 0 40.6061 0 c 46.2626 45.6566 46.0606 44.2424 48.2828 35.5556 48.8889 44.4444 40 73.9394 97.9798 0 100 99.798 95.1515 47.6768 99.798 0.6061 90.3031 29.2929 0 g 24.4444 22.6263 25.6566 23.0303 17.7778 29.4949 25.0505 18.7879 21.6162 0.8081 0 69.6969 0 0.202 0 0.808099 0.202 80.202 4.2424 17.1717 0 t 15.3535 16.5657 15.5556 15.7576 16.7677 16.7677 15.9596 19.798 24.8485 6.8687 1.6162 10.5051 0 0 4.8485 0 0 12.1212 5.45451 12.9293 0

M08321_2.00_shift5 (ZNF281)
; oligos_6nt_mkv4_m3 versus M08321_2.00 (ZNF281); m=143/201; ncol2=12; w=-3; offset=-3; strand=D; shift=5; score=0.475029; -----ybCCCCTCCCCC---- ; cor=; Ncor= a 0 0 0 0 0 9.89583 12.5744 0.967262 1.86012 0.0744048 10.4911 9.59821 0.0744048 0.0744048 0.0744048 0.0744048 0.0744048 0 0 0 0 c 0 0 0 0 0 39.3601 27.753 92.3363 96.2054 99.7768 77.1577 0.0744048 99.7768 99.7768 96.2054 99.7768 99.7768 0 0 0 0 g 0 0 0 0 0 24.4792 27.1577 2.75298 0.0744048 0.0744048 0.0744048 17.0387 0.0744048 0.0744048 0.0744048 0.0744048 0.0744048 0 0 0 0 t 0 0 0 0 0 26.2649 32.5149 3.94345 1.86012 0.0744048 12.2768 73.2887 0.0744048 0.0744048 3.64583 0.0744048 0.0744048 0 0 0 0

M09037_2.00_rc_shift4 (M09037_2.00_rc)
; oligos_6nt_mkv4_m3 versus M09037_2.00_rc; m=144/201; ncol2=14; w=-4; offset=-4; strand=R; shift=4; score=0.470817; ----wkkyCCCGCCcccy--- ; cor=; Ncor= a 0 0 0 0 32.8 24.2 10.4 4.8 1.8 4 3.2 7 1 0.2 15.6 17.6 6.2 15.4 0 0 0 c 0 0 0 0 19.6 17.6 10.6 32.6 90.4 91 95.8 0.6 97 90 53 55.2 60.4 27.4 0 0 0 g 0 0 0 0 19.6 28 39.4 4.8 1 4.8 0.2 89.8 0.8 7.4 6.6 6.8 10 19 0 0 0 t 0 0 0 0 28 30.2 39.6 57.8 6.8 0.2 0.8 2.6 1.2 2.4 24.8 20.4 23.4 38.2 0 0 0

M03705_2.00_shift6 (M03705_2.00)
; oligos_6nt_mkv4_m3 versus M03705_2.00; m=145/201; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.470522; ------rmCACrCCCmc---- ; cor=; Ncor= a 0 0 0 0 0 0 30.7967 30.3548 0 88.1119 3.4188 40.0564 6.49926 6.6482 0 40.2102 9.44386 0 0 0 0 c 0 0 0 0 0 0 10.9394 52.2996 90.7781 5.17483 89.7436 1.97461 93.0576 87.2576 80.3571 42.5756 66.107 0 0 0 0 g 0 0 0 0 0 0 44.1141 1.97109 4.89914 6.71329 0 48.6601 0 1.52355 3.06122 1.44547 0.629591 0 0 0 0 t 0 0 0 0 0 0 14.1498 15.3745 4.32277 0 6.83761 9.30889 0.443131 4.57064 16.5816 15.7687 23.8195 0 0 0 0

M06159_2.00_shift3 (M06159_2.00)
; oligos_6nt_mkv4_m3 versus M06159_2.00; m=146/201; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.470123; ---ktgRCCmCGCCCmyh--- ; cor=; Ncor= a 0 0 0 4.16667 25 20.8333 25 0 0 41.6667 0 4.16667 0 0 0 33.3333 4.34783 26.087 0 0 0 c 0 0 0 4.16667 12.5 8.33333 0 87.5 83.3333 58.3333 100 4.16667 100 100 95.8333 58.3333 47.8261 26.087 0 0 0 g 0 0 0 29.1667 8.33333 54.1667 75 0 4.16667 0 0 83.3333 0 0 0 4.16667 17.3913 8.69565 0 0 0 t 0 0 0 62.5 54.1667 16.6667 0 12.5 12.5 0 0 8.33333 0 0 4.16667 4.16667 30.4348 39.1304 0 0 0

M08086_2.00_shift12 (KLF5)
; oligos_6nt_mkv4_m3 versus M08086_2.00 (KLF5); m=147/201; ncol2=10; w=0; offset=4; strand=D; shift=12; score=0.469314; ------------gCCMCrCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 10.4989 0 0 25.5455 0 37.1097 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 14.863 87.4293 88.2228 70.3034 100 0 100 100 96.5028 g 0 0 0 0 0 0 0 0 0 0 0 0 55.6315 0 0 0 0 38.0721 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 19.0067 12.5707 11.7772 4.15105 0 24.8182 0 0 3.49717

M00231_2.00_shift12 (EGR2)
; oligos_6nt_mkv4_m3 versus M00231_2.00 (EGR2); m=148/201; ncol2=8; w=0; offset=4; strand=D; shift=12; score=0.466566; ------------mCCmCGCa- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 36.8338 0.0120424 0.0120424 43.3646 0.0120424 10.9824 0.013151 49.0734 0 c 0 0 0 0 0 0 0 0 0 0 0 0 56.1185 99.9639 99.9639 56.6113 98.7596 2.45002 93.3851 10.9193 0 g 0 0 0 0 0 0 0 0 0 0 0 0 1.77069 0.0120424 0.0120424 0.0120424 1.21628 84.1175 0.013151 21.8205 0 t 0 0 0 0 0 0 0 0 0 0 0 0 5.277 0.0120424 0.0120424 0.0120424 0.0120424 2.45002 6.58864 18.1868 0

M06160_2.00_shift3 (M06160_2.00)
; oligos_6nt_mkv4_m3 versus M06160_2.00; m=149/201; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.466282; ---kwrGCCmCGCCCmcy--- ; cor=; Ncor= a 0 0 0 11.04 33.6 27.8219 17.3291 6.51828 4.45151 39.4277 0.63593 3.6566 0.794913 0.63593 1.27186 43.0843 7.3955 22.8525 0 0 0 c 0 0 0 19.04 8.96 11.2878 0.953895 81.2401 72.496 60.5723 99.2051 0 99.2051 99.3641 81.876 42.1304 62.701 27.2285 0 0 0 g 0 0 0 25.12 14.4 42.4483 74.2448 5.40541 1.27186 0 0 90.461 0 0 0 1.43084 7.55627 13.128 0 0 0 t 0 0 0 44.8 43.04 18.442 7.47218 6.83625 21.7806 0 0.158983 5.88235 0 0 16.8521 13.3545 22.3473 36.7909 0 0 0

M08296_2.00_shift3 (SP4)
; oligos_6nt_mkv4_m3 versus M08296_2.00 (SP4); m=150/201; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.463322; ---yhgGCyCCgCCYCcy--- ; cor=; Ncor= a 0 0 0 15.7895 32.5911 24.2915 11.5385 1.8219 5.2632 12.1457 0 12.5506 0.2024 0 0 21.8623 12.1457 15.7895 0 0 0 c 0 0 0 42.5101 26.5182 18.8259 11.1336 75.9109 56.2753 83.4008 98.583 0 99.7976 99.7976 68.6235 70.2429 63.9676 45.3441 0 0 0 g 0 0 0 12.9555 14.9798 48.583 69.8381 7.085 3.4413 2.6316 1.417 67.6113 0 0 1.0121 0 4.8583 5.8704 0 0 0 t 0 0 0 28.7449 25.9109 8.2996 7.4899 15.1822 35.0202 1.8219 0 19.8381 0 0.2024 30.3644 7.8947 19.0283 32.996 0 0 0

M00134_2.00_shift6 (M00134_2.00)
; oligos_6nt_mkv4_m3 versus M00134_2.00; m=151/201; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.462999; ------gccmCgCCCh----- ; cor=; Ncor= a 0 0 0 0 0 0 23.4441 21.9242 17.7318 51.5538 0.989471 22.8736 0.00886864 0.0191497 0.112067 34.2124 0 0 0 0 0 c 0 0 0 0 0 0 18.0766 49.7789 53.8047 35.2557 97.4574 1.03044 99.9596 99.9363 82.3801 25.8571 0 0 0 0 0 g 0 0 0 0 0 0 41.4554 11.5605 7.65501 8.95871 0.0320459 66.0217 0.0241075 0.0173274 0.0228534 7.71053 0 0 0 0 0 t 0 0 0 0 0 0 17.0239 16.7365 20.8085 4.2318 1.52107 10.0743 0 0.0271748 17.485 32.22 0 0 0 0 0

M10294_2.00_shift6 (SP1)
; oligos_6nt_mkv4_m3 versus M10294_2.00 (SP1); m=152/201; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.462379; ------wcCmyGCCyc----- ; cor=; Ncor= a 0 0 0 0 0 0 54.5455 9.09091 18.1818 27.2727 18.1818 9.09091 0 0 9.09091 18.1818 0 0 0 0 0 c 0 0 0 0 0 0 0 63.6364 72.7273 63.6364 54.5455 18.1818 100 100 54.5455 54.5455 0 0 0 0 0 g 0 0 0 0 0 0 18.1818 18.1818 0 9.09091 0 72.7273 0 0 9.09091 9.09091 0 0 0 0 0 t 0 0 0 0 0 0 27.2727 9.09091 9.09091 0 27.2727 0 0 0 27.2727 18.1818 0 0 0 0 0

M04606_2.00_shift3 (SP1)
; oligos_6nt_mkv4_m3 versus M04606_2.00 (SP1); m=153/201; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.461848; ---twrGCCmCGCCCmCw--- ; cor=; Ncor= a 0 0 0 16.9909 56.8037 51.2491 18.8739 5.40541 0.947551 64.5165 0.218648 12.3046 0 0 0 52.4992 4.05832 28.9973 0 0 0 c 0 0 0 22.2937 5.17881 2.43829 1.62252 91.9364 84.7191 33.994 99.4534 1.27804 100 100 93.8199 43.1881 71.4114 22.203 0 0 0 g 0 0 0 16.7869 2.76005 42.8571 77.9504 1.0395 0.987588 1.06907 0 80.2991 0 0 0.120882 0.563852 2.16444 6.4177 0 0 0 t 0 0 0 43.9285 35.2575 3.4555 1.55318 1.61865 13.3458 0.42042 0.327971 6.11829 0 0 6.05923 3.74886 22.3658 42.3819 0 0 0

M08864_2.00_shift0 (PATZ1)
; oligos_6nt_mkv4_m3 versus M08864_2.00 (PATZ1); m=154/201; ncol2=22; w=-8; offset=-8; strand=D; shift=0; score=0.461799; cyyCccyycCmkcCCCckCCc ; cor=; Ncor= a 16.9043 4.48065 5.49898 4.07332 18.9409 17.1079 2.24033 3.05499 7.12831 6.31365 33.8086 1.62933 5.49898 1.01833 2.64766 12.0163 7.12831 11.8126 3.25866 9.16497 19.7556 c 48.8798 62.3218 31.3646 77.3931 57.6375 34.8269 49.4908 57.8411 60.6925 76.5784 55.3971 0.814664 61.5071 84.7251 69.2464 70.6721 62.3218 13.6456 84.1141 68.2281 63.9511 g 20.3666 1.42566 21.7923 5.70265 7.53564 24.0326 19.1446 6.31365 16.0896 14.2566 2.85132 55.8045 11.8126 1.62933 6.51731 3.05499 6.10998 28.7169 8.55397 8.35031 2.64766 t 13.8493 31.7719 41.3442 12.831 15.8859 24.0326 29.1242 32.7902 16.0896 2.85132 7.94297 41.7515 21.1813 12.6273 21.5886 14.2566 24.4399 45.8248 4.07332 14.2566 13.6456

M04458_2.00_shift6 (KLF16)
; oligos_6nt_mkv4_m3 versus M04458_2.00 (KLF16); m=155/201; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.461163; ------rcCACGCCCc----- ; cor=; Ncor= a 0 0 0 0 0 0 26.7813 23.9973 3.34076 78.7996 0 21.2741 0 1.33281 2.78963 22.6454 0 0 0 0 0 c 0 0 0 0 0 0 10.8518 54.7166 90.6459 10.2614 100 2.62548 100 95.7272 80.1444 57.5348 0 0 0 0 0 g 0 0 0 0 0 0 52.9075 8.29039 2.37565 2.19426 0 73.0116 0 1.17601 0.0656383 3.1941 0 0 0 0 0 t 0 0 0 0 0 0 9.45946 12.9957 3.63771 8.74476 0 3.0888 0 1.76401 17.0003 16.6257 0 0 0 0 0

M09041_2.00_rc_shift5 (M09041_2.00_rc)
; oligos_6nt_mkv4_m3 versus M09041_2.00_rc; m=156/201; ncol2=12; w=-3; offset=-3; strand=R; shift=5; score=0.460719; -----ykyCCCGCCcyc---- ; cor=; Ncor= a 0 0 0 0 0 14 4.8 1.4 0 2 3.4 5.6 0.4 1.2 16.2 17.8 15.2 0 0 0 0 c 0 0 0 0 0 30.2 16.4 37 96.2 88.4 93.4 0.4 97.4 82.6 64.4 33.6 50.8 0 0 0 0 g 0 0 0 0 0 20.2 28.2 4.2 1.6 1.8 0.8 92.4 0.8 10.4 2.4 11.4 16.2 0 0 0 0 t 0 0 0 0 0 35.6 50.6 57.4 2.2 7.8 2.4 1.6 1.4 5.8 17 37.2 17.8 0 0 0 0

M00787_2.00_shift6 (M00787_2.00)
; oligos_6nt_mkv4_m3 versus M00787_2.00; m=157/201; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.455788; ------rccmCrCCCw----- ; cor=; Ncor= a 0 0 0 0 0 0 25.986 23.1178 19.3153 50.6834 0.194537 30.2468 0.00336185 0.00625172 2.24714 39.1927 0 0 0 0 0 c 0 0 0 0 0 0 15.6045 47.0215 51.4647 34.6604 99.7699 0.00388508 99.9566 99.9931 79.0168 22.3872 0 0 0 0 0 g 0 0 0 0 0 0 41.1638 13.0737 10.2872 8.63306 0.00306676 62.1399 0.00261821 0.000459717 0.0148413 12.4098 0 0 0 0 0 t 0 0 0 0 0 0 17.2456 16.787 18.9328 6.02308 0.0324799 7.60943 0.0374307 0 18.7213 26.0102 0 0 0 0 0

M08298_2.00_shift5 (KLF7)
; oligos_6nt_mkv4_m3 versus M08298_2.00 (KLF7); m=158/201; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.454505; -----ggCcmCGCCCm----- ; cor=; Ncor= a 0 0 0 0 0 20.9622 15.4639 9.2784 19.9313 32.3024 0 19.244 0 0 0 29.2096 0 0 0 0 0 c 0 0 0 0 0 20.2749 17.5258 88.6598 61.512 67.6976 100 0 100 100 100 37.1134 0 0 0 0 0 g 0 0 0 0 0 46.7354 57.0447 0 0 0 0 80.756 0 0 0 9.622 0 0 0 0 0 t 0 0 0 0 0 12.0275 9.9656 2.0619 18.5567 0 0 0 0 0 0 24.055 0 0 0 0 0

M04605_2.00_shift3 (SP1)
; oligos_6nt_mkv4_m3 versus M04605_2.00 (SP1); m=159/201; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.453921; ---ywrRCCACGCCCmCh--- ; cor=; Ncor= a 0 0 0 15.8388 55.3795 56.5615 27.8959 1.92315 0.107058 76.8869 0 1.88843 0 0.0161063 0 49.0866 2.36901 25.367 0 0 0 c 0 0 0 26.7261 3.67196 2.99495 0 97.665 96.6423 23.1131 99.9376 0 99.9658 99.9839 97.1322 48.1512 74.5634 31.4238 0 0 0 g 0 0 0 19.5135 1.95955 38.1259 71.8114 0.163928 0 0 0 96.4043 0 0 0 0.0298507 1.82186 6.12931 0 0 0 t 0 0 0 37.9216 38.989 2.31766 0.292655 0.247891 3.25067 0 0.0623855 1.70726 0.0342169 0 2.86784 2.73234 21.2458 37.0799 0 0 0

M08387_2.00_shift7 (ZBTB14)
; oligos_6nt_mkv4_m3 versus M08387_2.00 (ZBTB14); m=160/201; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.453426; -------sCGCGCsCc----- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 12.6972 0.0788644 12.3817 0 0 0 0 0 c 0 0 0 0 0 0 0 36.6719 99.7634 0.0788644 99.7634 0.0788644 99.7634 37.6183 99.7634 57.1767 0 0 0 0 0 g 0 0 0 0 0 0 0 57.4921 0.0788644 99.7634 0.0788644 99.7634 0.0788644 49.6057 0.0788644 20.2681 0 0 0 0 0 t 0 0 0 0 0 0 0 5.7571 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 10.1735 0 0 0 0 0

M05846_2.00_shift2 (CTCF)
; oligos_6nt_mkv4_m3 versus M05846_2.00 (CTCF); m=161/201; ncol2=17; w=-6; offset=-6; strand=D; shift=2; score=0.452076; --cscwmyasCgCCcCCtw-- ; cor=; Ncor= a 0 0 15.4 14.5 17.5 31.6 39.5 11.8 46.5 16.2 2.5 8.1 5.4 1.8 12.4 4.3 8.8 17.9 37.2 0 0 c 0 0 44.8 40.6 42.1 20.3 36.3 33.9 18.1 25.1 77.1 13.4 80.3 92.7 66.5 80.3 77.9 15.4 10.6 0 0 g 0 0 15.9 26.4 21.5 20.4 9.9 19.6 17.9 50.7 5.3 64.3 10.9 4 15.4 1.9 7 4 21 0 0 t 0 0 23.9 18.4 18.9 27.6 14.3 34.8 17.5 8 15.1 14.3 3.4 1.5 5.7 13.6 6.3 62.8 31.2 0 0

M08963_2.00_shift2 (M08963_2.00)
; oligos_6nt_mkv4_m3 versus M08963_2.00; m=162/201; ncol2=24; w=-6; offset=-6; strand=D; shift=2; score=0.450702; --CCCsgCYCCkCCCCCtcCc ; cor=; Ncor= a 0 0 2.45399 3.68098 12.0654 8.79346 5.31697 1.63599 1.84049 0.817996 0.817996 6.33947 0.817996 3.68098 3.47648 4.29448 2.24949 13.7014 2.86299 5.52147 8.99796 c 0 0 69.9387 71.5746 68.5072 34.7648 11.6564 93.047 69.5297 92.8425 91.411 1.43149 92.638 79.9591 73.6196 77.0961 71.7791 22.4949 57.0552 73.8241 55.2147 g 0 0 11.8609 12.8834 7.77096 38.4458 58.0777 1.84049 2.86299 2.24949 1.22699 61.1452 1.63599 4.90798 5.31697 5.52147 8.79346 23.9264 24.3354 4.90798 11.8609 t 0 0 15.7464 11.8609 11.6564 17.9959 24.9489 3.47648 25.7669 4.08998 6.54397 31.0838 4.90798 11.4519 17.5869 13.0879 17.1779 39.8773 15.7464 15.7464 23.9264

M00779_2.00_shift6 (M00779_2.00)
; oligos_6nt_mkv4_m3 versus M00779_2.00; m=163/201; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.450624; ------rccmCrCCYh----- ; cor=; Ncor= a 0 0 0 0 0 0 27.1429 23.9158 19.9845 44.052 6.52389 36.7441 3.85933 3.10594 4.58462 32.2624 0 0 0 0 0 c 0 0 0 0 0 0 17.8341 41.8687 46.7566 34.3077 84.3918 0.00329278 94.6792 96.8649 70.2954 25.126 0 0 0 0 0 g 0 0 0 0 0 0 36.2745 15.4026 12.8707 12.0056 0.00980827 49.5994 0.013043 0.0134782 0.0240579 15.3929 0 0 0 0 0 t 0 0 0 0 0 0 18.7485 18.8128 20.3882 9.6347 9.07452 13.6533 1.44845 0.0156594 25.0959 27.2187 0 0 0 0 0

M04525_2.00_shift2 (SP2)
; oligos_6nt_mkv4_m3 versus M04525_2.00 (SP2); m=164/201; ncol2=17; w=-6; offset=-6; strand=D; shift=2; score=0.446634; --mTAAGyCCCGCCCmCyy-- ; cor=; Ncor= a 0 0 32.2825 5.96175 70.5409 80.3629 5.3202 4.12121 1.7744 1.94411 0.484262 8.55057 0 0.601685 2.79126 48.3755 2.73973 13.0852 18.9155 0 0 c 0 0 38.8398 19.2351 8.74568 8.96478 12.5123 55.2727 98.0989 95.5043 95.3995 5.42231 97.786 95.4272 93.932 46.9314 84.5579 26.5306 25.599 0 0 g 0 0 15.5107 6.4117 0 3.52188 77.931 0.969697 0.126743 1.57959 2.66344 81.3347 0 3.12876 0 2.64741 0.124533 0 11.0971 0 0 t 0 0 13.367 68.3915 20.7135 7.15048 4.23645 39.6364 0 0.972053 1.45278 4.69239 2.21402 0.842359 3.2767 2.04573 12.5778 60.3842 44.3884 0 0

M10133_2.00_shift12 (MZF1)
; oligos_6nt_mkv4_m3 versus M10133_2.00 (MZF1); m=165/201; ncol2=8; w=0; offset=4; strand=D; shift=12; score=0.44637; ------------TCCCCmcy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 45 15 15 0 c 0 0 0 0 0 0 0 0 0 0 0 0 5 100 95 90 100 25 55 30 0 g 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 15 10 15 0 t 0 0 0 0 0 0 0 0 0 0 0 0 90 0 0 5 0 15 20 40 0

M02027_2.00_rc_shift11 (M02027_2.00_rc)
; oligos_6nt_mkv4_m3 versus M02027_2.00_rc; m=166/201; ncol2=8; w=0; offset=3; strand=R; shift=11; score=0.446107; -----------rCCCgyAy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 51.345 0 0 12.453 8.94482 0.0946611 85.1661 2.7911 0 0 c 0 0 0 0 0 0 0 0 0 0 0 10.06 99.9928 99.9838 78.4106 16.6278 58.7064 4.68611 29.2663 0 0 g 0 0 0 0 0 0 0 0 0 0 0 31.1423 0.00319905 0.00719052 3.42794 63.5022 12.3363 5.55447 11.3185 0 0 t 0 0 0 0 0 0 0 0 0 0 0 7.45264 0.00382996 0.00895994 5.70851 10.9252 28.8626 4.59332 56.6242 0 0

M03704_2.00_shift6 (M03704_2.00)
; oligos_6nt_mkv4_m3 versus M03704_2.00; m=167/201; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.442896; ------rCCACrCCCh----- ; cor=; Ncor= a 0 0 0 0 0 0 37.9958 13.3205 9.30476 70.6121 0 35.0795 0 3.46062 0.998238 39.3436 0 0 0 0 0 c 0 0 0 0 0 0 15.2401 75.7239 82.0178 19.982 99.8727 1.39697 99.241 93.6158 92.1315 29.4558 0 0 0 0 0 g 0 0 0 0 0 0 43.8935 4.92278 3.816 5.49055 0 60.8847 0 1.43198 0.0587199 5.35937 0 0 0 0 0 t 0 0 0 0 0 0 2.87056 6.03282 4.86147 3.91539 0.127307 2.63873 0.759013 1.49165 6.81151 25.8413 0 0 0 0 0

M08988_2.00_shift1 (M08988_2.00)
; oligos_6nt_mkv4_m3 versus M08988_2.00; m=168/201; ncol2=22; w=-7; offset=-7; strand=D; shift=1; score=0.441764; -yyyyyyycyCycYyCCtCCy ; cor=; Ncor= a 0 6.6 10.8 7.6 12.2 8 5.8 4.4 4.2 5.8 8.8 21.6 2.8 4 3.4 1.4 3 23.8 1 3.4 1.2 c 0 56.2 43 44.6 55.6 45.6 57 51.2 64.8 55.4 69.8 33.2 65.6 68 66.6 85.2 90.6 2.6 82.6 86.6 67.4 g 0 9.8 10.6 20.4 6.2 13.4 7.2 7.8 12 5.4 4 13.4 20.2 0.8 3.4 2 1 8.8 11.2 1.8 1.2 t 0 27.4 35.6 27.4 26 33 30 36.6 19 33.4 17.4 31.8 11.4 27.2 26.6 11.4 5.4 64.8 5.2 8.2 30.2

M08870_2.00_shift1 (MAZ)
; oligos_6nt_mkv4_m3 versus M08870_2.00 (MAZ); m=169/201; ncol2=22; w=-7; offset=-7; strand=D; shift=1; score=0.441764; -yyyyyyycyCycYyCCtCCy ; cor=; Ncor= a 0 6.6 10.8 7.6 12.2 8 5.8 4.4 4.2 5.8 8.8 21.6 2.8 4 3.4 1.4 3 23.8 1 3.4 1.2 c 0 56.2 43 44.6 55.6 45.6 57 51.2 64.8 55.4 69.8 33.2 65.6 68 66.6 85.2 90.6 2.6 82.6 86.6 67.4 g 0 9.8 10.6 20.4 6.2 13.4 7.2 7.8 12 5.4 4 13.4 20.2 0.8 3.4 2 1 8.8 11.2 1.8 1.2 t 0 27.4 35.6 27.4 26 33 30 36.6 19 33.4 17.4 31.8 11.4 27.2 26.6 11.4 5.4 64.8 5.2 8.2 30.2

M04526_2.00_shift2 (SP2)
; oligos_6nt_mkv4_m3 versus M04526_2.00 (SP2); m=170/201; ncol2=17; w=-6; offset=-6; strand=D; shift=2; score=0.438899; --wTwAGTCCCGCCCmCtT-- ; cor=; Ncor= a 0 0 28.8199 7.42857 58.2969 75.3333 5.18379 1.1976 3.08422 1.18203 3.22953 7.5 1.75439 1.93705 3.97276 34.4009 2.4619 15.9272 10.3106 0 0 c 0 0 24.9689 14.2857 11.0262 12.4762 17.9076 24.9102 95.0178 94.7991 92.7336 8.17308 93.5673 97.4576 87.0602 60.6168 80.891 12.7418 16.3975 0 0 g 0 0 17.6398 2.97143 1.41921 2.85714 73.0443 2.15569 0.118624 1.41844 1.61476 75.9615 2.10526 0.605327 2.49716 1.89798 0.820633 3.9818 4.47205 0 0 t 0 0 28.5714 75.3143 29.2576 9.33333 3.86428 71.7365 1.77936 2.60047 2.42215 8.36538 2.5731 0 6.46992 3.08422 15.8265 67.3493 68.8199 0 0

M07586_2.00_rc_shift4 (ZNF141_rc)
; oligos_6nt_mkv4_m3 versus M07586_2.00_rc (ZNF141_rc); m=171/201; ncol2=24; w=-4; offset=-4; strand=R; shift=4; score=0.436297; ----GGGGGmCRCyCcCmccs ; cor=; Ncor= a 0 0 0 0 10.3987 4.14871 0.0538793 0.0538793 0.0538793 61.2608 0.0538793 26.1315 0.269397 12.7694 3.07112 3.71767 4.57974 44.2349 10.8297 11.4763 17.9418 c 0 0 0 0 4.36422 0.0538793 0.0538793 0.0538793 3.93319 29.1487 99.6228 0.269397 98.7608 50.4849 91.4332 64.9246 79.5797 33.4591 61.0453 63.2004 33.028 g 0 0 0 0 76.1315 95.7435 81.0884 90.3556 95.7435 8.89009 0.0538793 72.8987 0.700431 0.269397 0.269397 8.24353 8.89009 10.1832 14.0625 3.28664 32.3815 t 0 0 0 0 9.1056 0.0538793 18.8039 9.53664 0.269397 0.700431 0.269397 0.700431 0.269397 36.4763 5.22629 23.1142 6.95043 12.1228 14.0625 22.0366 16.6487

M07614_2.00_shift6 (ZNF180)
; oligos_6nt_mkv4_m3 versus M07614_2.00 (ZNF180); m=172/201; ncol2=21; w=-2; offset=-2; strand=D; shift=6; score=0.436003; ------CCsCasbCcCCdCCc ; cor=; Ncor= a 0 0 0 0 0 0 0.182482 0.182482 10.4015 2.37226 49.0876 8.21168 7.48175 0.182482 3.10219 3.10219 0.182482 27.1898 0.912409 2.37226 14.781 c 0 0 0 0 0 0 92.8832 85.5839 57.1168 76.8248 19.8905 45.438 27.9197 99.4526 66.6058 73.9051 91.4234 11.1314 92.1533 70.9854 57.1168 g 0 0 0 0 0 0 6.75182 5.29197 28.6496 9.67153 21.3504 46.1679 25.7299 0.182482 16.9708 16.2409 0.182482 36.6788 5.29197 9.67153 11.1314 t 0 0 0 0 0 0 0.182482 8.94161 3.83212 11.1314 9.67153 0.182482 38.8686 0.182482 13.3212 6.75182 8.21168 25 1.64234 16.9708 16.9708

M08990_2.00_shift7 (M08990_2.00)
; oligos_6nt_mkv4_m3 versus M08990_2.00; m=173/201; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.435131; -------smCCwCCCm----- ; cor=; Ncor= a 0 0 0 0 0 0 0 6.59609 61.2378 0 11.7264 49.5114 0 2.9316 0 30.1303 0 0 0 0 0 c 0 0 0 0 0 0 0 27.443 26.7101 70.684 76.5472 17.5896 94.1368 94.1368 85.342 51.9544 0 0 0 0 0 g 0 0 0 0 0 0 0 44.3811 8.79479 23.4528 0 2.9316 5.86319 2.9316 5.86319 13.1922 0 0 0 0 0 t 0 0 0 0 0 0 0 21.5798 3.25733 5.86319 11.7264 29.9674 0 0 8.79479 4.72313 0 0 0 0 0

M08900_2.00_shift7 (ZIC1)
; oligos_6nt_mkv4_m3 versus M08900_2.00 (ZIC1); m=174/201; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.435131; -------smCCwCCCm----- ; cor=; Ncor= a 0 0 0 0 0 0 0 6.59609 61.2378 0 11.7264 49.5114 0 2.9316 0 30.1303 0 0 0 0 0 c 0 0 0 0 0 0 0 27.443 26.7101 70.684 76.5472 17.5896 94.1368 94.1368 85.342 51.9544 0 0 0 0 0 g 0 0 0 0 0 0 0 44.3811 8.79479 23.4528 0 2.9316 5.86319 2.9316 5.86319 13.1922 0 0 0 0 0 t 0 0 0 0 0 0 0 21.5798 3.25733 5.86319 11.7264 29.9674 0 0 8.79479 4.72313 0 0 0 0 0

M04554_2.00_shift6 (KLF11)
; oligos_6nt_mkv4_m3 versus M04554_2.00 (KLF11); m=175/201; ncol2=22; w=-2; offset=-2; strand=D; shift=6; score=0.434444; ------rcCACrCCCmcgcCA ; cor=; Ncor= a 0 0 0 0 0 0 28.8489 19.7979 10.425 69.4809 0.760334 31.7458 0 0.531684 0.118977 43.5945 7.26678 20.5346 22.0646 6.51694 85.812 c 0 0 0 0 0 0 19.4326 61.5644 79.0845 22.8657 97.6012 0.514664 99.9237 99.4358 88.0329 43.2999 67.6378 22.4113 60.5522 86.8458 12.7801 g 0 0 0 0 0 0 43.066 9.90831 3.8113 6.64951 0.0428357 63.7693 0 0.0108507 0.198295 1.866 6.37207 42.8805 4.37582 1.56407 1.14019 t 0 0 0 0 0 0 8.65248 8.72942 6.67912 1.00386 1.59563 3.97026 0.0763359 0.0217014 11.6498 11.2396 18.7234 14.1735 13.0074 5.07319 0.267698

M07717_2.00_shift5 (ZNF441)
; oligos_6nt_mkv4_m3 versus M07717_2.00 (ZNF441); m=176/201; ncol2=12; w=-3; offset=-3; strand=D; shift=5; score=0.434143; -----rrCTCCGcCyCc---- ; cor=; Ncor= a 0 0 0 0 0 26.6892 47.4099 0.112613 0.112613 0.112613 0.112613 0.112613 0.563063 0.112613 0.563063 0.112613 15.8784 0 0 0 0 c 0 0 0 0 0 18.5811 1.46396 99.6622 21.2838 99.6622 99.6622 0.112613 65.4279 80.7432 56.4189 69.9324 47.8604 0 0 0 0 g 0 0 0 0 0 48.3108 51.0135 0.112613 0.112613 0.112613 0.112613 99.6622 10.9234 7.77027 6.41892 20.3829 22.1847 0 0 0 0 t 0 0 0 0 0 6.41892 0.112613 0.112613 78.491 0.112613 0.112613 0.112613 23.0856 11.3739 36.5991 9.57207 14.0766 0 0 0 0

M09036_2.00_rc_shift4 (E2F4_rc)
; oligos_6nt_mkv4_m3 versus M09036_2.00_rc (E2F4_rc); m=177/201; ncol2=13; w=-4; offset=-4; strand=R; shift=4; score=0.433239; ----hytYCCCGCCcys---- ; cor=; Ncor= a 0 0 0 0 32.6 14.8 4.2 1.2 0.2 0.8 1.6 1.4 0.2 1.6 13 16.4 9 0 0 0 0 c 0 0 0 0 30.6 28.2 22.2 25 89.4 95 94.6 0 95.8 69.6 52.6 46.2 50.6 0 0 0 0 g 0 0 0 0 11.4 18.8 20 2.2 1.4 3.8 0.2 97.4 3.6 18.8 10 9.6 25.8 0 0 0 0 t 0 0 0 0 25.4 38.2 53.6 71.6 9 0.4 3.6 1.2 0.4 10 24.4 27.8 14.6 0 0 0 0

M08243_2.00_shift6 (KLF4)
; oligos_6nt_mkv4_m3 versus M08243_2.00 (KLF4); m=178/201; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.432664; ------gCCmCrCCCw----- ; cor=; Ncor= a 0 0 0 0 0 0 21.5541 6.6731 2.8826 47.0176 0.7831 49.183 0.3685 0.2997 0.1386 40.7052 0 0 0 0 0 c 0 0 0 0 0 0 6.4761 87.4843 89.9686 50.1722 98.364 0.2536 98.4801 99.0776 97.6252 23.5703 0 0 0 0 0 g 0 0 0 0 0 0 66.0954 3.0022 1.0613 1.8427 0.346 44.1938 0.8289 0.3 0.2081 1.8688 0 0 0 0 0 t 0 0 0 0 0 0 5.8745 2.8404 6.0875 0.9675 0.5068 6.3696 0.3225 0.3227 2.028 33.8558 0 0 0 0 0

M08246_2.00_shift6 (KLF10)
; oligos_6nt_mkv4_m3 versus M08246_2.00 (KLF10); m=179/201; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.432664; ------gCCmCrCCCw----- ; cor=; Ncor= a 0 0 0 0 0 0 21.554 6.673 2.8825 47.0175 0.7831 49.183 0.3685 0.2997 0.1386 40.7052 0 0 0 0 0 c 0 0 0 0 0 0 6.4761 87.4843 89.9687 50.1723 98.3641 0.2537 98.4802 99.0777 97.6252 23.5703 0 0 0 0 0 g 0 0 0 0 0 0 66.0954 3.0023 1.0613 1.8427 0.3461 44.1938 0.8289 0.3001 0.2082 1.8688 0 0 0 0 0 t 0 0 0 0 0 0 5.8745 2.8403 6.0874 0.9675 0.5068 6.3696 0.3225 0.3227 2.0279 33.8557 0 0 0 0 0

M04456_2.00_shift5 (KLF2)
; oligos_6nt_mkv4_m3 versus M04456_2.00 (KLF2); m=180/201; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.43262; -----srCCmCrCCCm----- ; cor=; Ncor= a 0 0 0 0 0 21.2044 38.0149 6.81334 0.934809 48.188 0 37.9653 0 1.70501 0 31.1281 0 0 0 0 0 c 0 0 0 0 0 34.4925 19.6371 83.6764 87.0111 42.1117 100 1.9024 99.2424 95.724 90.5994 30.393 0 0 0 0 0 g 0 0 0 0 0 26.4348 37.46 6.52945 10.9717 6.82561 0 59.5533 0.701459 2.24628 3.61168 17.7269 0 0 0 0 0 t 0 0 0 0 0 17.8682 4.88794 2.98084 1.08241 2.87466 0 0.578991 0.0561167 0.324763 5.78893 20.752 0 0 0 0 0

M09035_2.00_rc_shift4 (TFDP1,TFDP2,TFDP3_rc)
; oligos_6nt_mkv4_m3 versus M09035_2.00_rc (TFDP1,TFDP2,TFDP3_rc); m=181/201; ncol2=14; w=-4; offset=-4; strand=R; shift=4; score=0.427951; ----yytTCCCGCCyyyy--- ; cor=; Ncor= a 0 0 0 0 22.8 14.8 2.2 1.8 1.2 0.8 3.4 3.8 1.4 0.8 17.2 14.4 8.6 11 0 0 0 c 0 0 0 0 28.2 25.4 15.8 13 87.8 93.8 90.4 1.4 94.4 78.2 42.8 41.6 51.8 39.8 0 0 0 g 0 0 0 0 18 11.8 18.8 2 3.2 4.6 1.6 87.4 1 11.4 7.8 11 12.8 14 0 0 0 t 0 0 0 0 31 48 63.2 83.2 7.8 0.8 4.6 7.4 3.2 9.6 32.2 33 26.8 35.2 0 0 0

M04410_2.00_shift6 (KLF5)
; oligos_6nt_mkv4_m3 versus M04410_2.00 (KLF5); m=182/201; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.427856; ------vcCACrCCCh----- ; cor=; Ncor= a 0 0 0 0 0 0 30.3774 20.3306 0 72.2525 1.67921 37.3512 0.641399 4.19825 4.68673 31.3639 0 0 0 0 0 c 0 0 0 0 0 0 26.3522 67.2727 88.4872 20.663 92.1251 3.18452 92.7697 92.7697 78.4904 35.5123 0 0 0 0 0 g 0 0 0 0 0 0 29.7484 5.06887 0 0 0 47.3512 2.91545 0 1.57869 5.65682 0 0 0 0 0 t 0 0 0 0 0 0 13.522 7.32782 11.5128 7.08447 6.19572 12.1131 3.67347 3.03207 15.2442 27.467 0 0 0 0 0

M09502_2.00_shift6 (KLF5)
; oligos_6nt_mkv4_m3 versus M09502_2.00 (KLF5); m=183/201; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.425085; ------GCCmCrCCCw----- ; cor=; Ncor= a 0 0 0 0 0 0 14.8 18.4 2.2 52.6 1.2 49 0.1 0.1 0.1 35.7 0 0 0 0 0 c 0 0 0 0 0 0 1.9 69.4 92.2 40.5 97.2 0.1 99.7 99.7 88.2 22.4 0 0 0 0 0 g 0 0 0 0 0 0 75.6 6 0.1 2.3 0.1 42.8 0.1 0.1 0.1 5.5 0 0 0 0 0 t 0 0 0 0 0 0 7.7 6.2 5.5 4.6 1.5 8.1 0.1 0.1 11.6 36.4 0 0 0 0 0

M04464_2.00_shift5 (KLF4)
; oligos_6nt_mkv4_m3 versus M04464_2.00 (KLF4); m=184/201; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.423334; -----crCCmCrCCCa----- ; cor=; Ncor= a 0 0 0 0 0 16.7449 31.7536 4.96811 6.89314 53.6107 0 33.5846 0 1.09954 0 38.0943 0 0 0 0 0 c 0 0 0 0 0 43.525 22.8541 85.8006 84.3008 38.4297 96.0541 0 99.7269 98.6111 96.1806 22.9896 0 0 0 0 0 g 0 0 0 0 0 18.0164 35.545 3.12185 4.86478 4.50207 0.244269 61.163 0 0.270062 0.865475 15.0068 0 0 0 0 0 t 0 0 0 0 0 21.7136 9.84729 6.10943 3.94129 3.45759 3.70162 5.25245 0.273117 0.0192901 2.9539 23.9092 0 0 0 0 0

M08894_2.00_shift6 (KLF4)
; oligos_6nt_mkv4_m3 versus M08894_2.00 (KLF4); m=185/201; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.423308; ------rCCmCrCCCw----- ; cor=; Ncor= a 0 0 0 0 0 0 25 6.6 4.8 55.4 0 52.6 0.6 0.6 0.4 35.6 0 0 0 0 0 c 0 0 0 0 0 0 6.8 88.2 88.6 43.8 99.2 0.4 97.8 99.2 98.8 20.4 0 0 0 0 0 g 0 0 0 0 0 0 62.8 3.8 1.6 0.4 0.4 44.4 0.4 0 0 2 0 0 0 0 0 t 0 0 0 0 0 0 5.4 1.4 5 0.4 0.4 2.6 1.2 0.2 0.8 42 0 0 0 0 0

M09030_2.00_rc_shift4 (E2F1_rc)
; oligos_6nt_mkv4_m3 versus M09030_2.00_rc (E2F1_rc); m=186/201; ncol2=14; w=-4; offset=-4; strand=R; shift=4; score=0.421146; ----yyyTCCCGCCcycy--- ; cor=; Ncor= a 0 0 0 0 16.8 9.4 1 3.4 0.8 0.6 1.8 1.8 1 1.4 24.2 22.8 11.2 13.4 0 0 0 c 0 0 0 0 39.6 36.6 27.2 9 89 89 95.8 0.4 96.6 70.4 46.6 29 45.2 37.8 0 0 0 g 0 0 0 0 16.4 14 6.4 2 3.4 8.2 0.8 92.2 0.6 20 10.2 21 20 16 0 0 0 t 0 0 0 0 27.2 40 65.4 85.6 6.8 2.2 1.6 5.6 1.8 8.2 19 27.2 23.6 32.8 0 0 0

M01965_2.00_rc_shift7 (M01965_2.00_rc)
; oligos_6nt_mkv4_m3 versus M01965_2.00_rc; m=187/201; ncol2=9; w=-1; offset=-1; strand=R; shift=7; score=0.420387; -------rssCGCcmw----- ; cor=; Ncor= a 0 0 0 0 0 0 0 26.6951 17.0249 0.941705 0 1.40615 0 8.43249 41.9828 34.1094 0 0 0 0 0 c 0 0 0 0 0 0 0 23.9143 53.2328 33.1134 99.9041 0.00148976 86.4773 55.2624 27.3102 20.8963 0 0 0 0 0 g 0 0 0 0 0 0 0 36.3967 28.0692 64.7113 0.00126108 98.579 11.587 24.0971 13.2933 15.636 0 0 0 0 0 t 0 0 0 0 0 0 0 12.9939 1.67309 1.2336 0.0866577 0.0133113 1.93456 12.208 17.4137 29.3583 0 0 0 0 0

M04555_2.00_shift6 (KLF11)
; oligos_6nt_mkv4_m3 versus M04555_2.00 (KLF11); m=188/201; ncol2=22; w=-2; offset=-2; strand=D; shift=6; score=0.417904; ------rmCACrCCCmcsmCA ; cor=; Ncor= a 0 0 0 0 0 0 27.2131 25.8017 6.88056 68.9189 1.2987 31.2951 0 0.0291206 0.144196 36.8329 8.86556 19.0608 27.4278 2.98854 85.545 c 0 0 0 0 0 0 20.3588 53.9309 80.6868 21.8115 97.317 0.794397 100 99.8981 77.2891 42.1551 64.4649 25.4047 48.3085 90.0928 11.6377 g 0 0 0 0 0 0 40.0904 8.20849 6.05339 7.13648 0.185529 59.9666 0 0.0728014 0.0240327 2.84339 5.29309 36.2258 6.16798 1.25546 2.09321 t 0 0 0 0 0 0 12.3378 12.0589 6.37925 2.13312 1.1988 7.94397 0 0 22.5427 18.1686 21.3765 19.3087 18.0957 5.66321 0.724065

M07649_2.00_shift8 (ZNF619)
; oligos_6nt_mkv4_m3 versus M07649_2.00 (ZNF619); m=189/201; ncol2=23; w=0; offset=0; strand=D; shift=8; score=0.417374; --------CscsCCCCycCCk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 7.6923 15.3846 3.8462 7.6923 7.6923 0 3.8462 11.5385 23.0769 0 0 11.5385 c 0 0 0 0 0 0 0 0 73.0769 53.8462 46.1538 38.4615 73.0769 76.9231 100 88.4615 46.1538 57.6923 100 100 23.0769 g 0 0 0 0 0 0 0 0 19.2308 26.9231 19.2308 38.4615 15.3846 7.6923 0 0 15.3846 3.8462 0 0 26.9231 t 0 0 0 0 0 0 0 0 7.6923 11.5385 19.2308 19.2308 3.8462 7.6923 0 7.6923 26.9231 15.3846 0 0 38.4615

M07616_2.00_shift7 (ZNF610)
; oligos_6nt_mkv4_m3 versus M07616_2.00 (ZNF610); m=190/201; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.412301; -------cGCCGCTCC----- ; cor=; Ncor= a 0 0 0 0 0 0 0 22.557 6.59609 5.61889 0.0814332 0.0814332 0.0814332 0.0814332 0.0814332 0.0814332 0 0 0 0 0 c 0 0 0 0 0 0 0 41.7752 0.0814332 79.886 99.7557 0.0814332 99.7557 0.0814332 99.7557 99.7557 0 0 0 0 0 g 0 0 0 0 0 0 0 20.9283 84.772 14.4137 0.0814332 99.7557 0.0814332 0.0814332 0.0814332 0.0814332 0 0 0 0 0 t 0 0 0 0 0 0 0 14.7394 8.55049 0.0814332 0.0814332 0.0814332 0.0814332 99.7557 0.0814332 0.0814332 0 0 0 0 0

M04418_2.00_shift5 (KLF3)
; oligos_6nt_mkv4_m3 versus M04418_2.00 (KLF3); m=191/201; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.411931; -----grCCrCGCCCw----- ; cor=; Ncor= a 0 0 0 0 0 17.8391 56.193 3.04476 0.675125 60.2825 4.81576 8.65443 0.464453 0.191372 0.172638 39.3652 0 0 0 0 0 c 0 0 0 0 0 6.13745 1.39513 91.3408 98.0041 1.59284 92.1384 0.680938 99.4643 99.7418 96.9889 23.3454 0 0 0 0 0 g 0 0 0 0 0 61.4161 41.9423 4.12584 0.561849 37.1806 0.0447284 88.1937 0.0712775 0.066865 0.107618 3.49985 0 0 0 0 0 t 0 0 0 0 0 14.6074 0.469579 1.4886 0.758949 0.943991 3.00106 2.47095 0 0 2.73082 33.7895 0 0 0 0 0

M04411_2.00_shift6 (KLF5)
; oligos_6nt_mkv4_m3 versus M04411_2.00 (KLF5); m=192/201; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.411928; ------gmCACrCCcw----- ; cor=; Ncor= a 0 0 0 0 0 0 24.8178 32.3229 3.91576 68.5657 0 26.6089 5.11935 11.351 6.89405 31.3047 0 0 0 0 0 c 0 0 0 0 0 0 16.691 52.5827 90.2929 13.4433 96.1121 0.585069 86.1809 80.07 66.3764 21.7566 0 0 0 0 0 g 0 0 0 0 0 0 43.7682 5.62945 1.54656 8.9955 0 64.2172 1.60176 5.31077 3.9671 10.605 0 0 0 0 0 t 0 0 0 0 0 0 14.723 9.46489 4.24482 8.9955 3.88792 8.58881 7.09799 3.26816 22.7625 36.3338 0 0 0 0 0

M04463_2.00_shift5 (KLF4)
; oligos_6nt_mkv4_m3 versus M04463_2.00 (KLF4); m=193/201; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.411063; -----srCCACrCCCh----- ; cor=; Ncor= a 0 0 0 0 0 19.0879 35.9409 12.4731 12.5032 70.7975 0.981144 36.0936 0 3.2263 0.720669 41.0845 0 0 0 0 0 c 0 0 0 0 0 35.5446 22.9869 71.0434 80.0077 19.148 96.1367 0.575309 99.5713 95.8869 90.3863 26.7783 0 0 0 0 0 g 0 0 0 0 0 27.6351 32.6696 8.50799 3.61061 6.79862 0 59.1436 0 0.366972 2.23407 6.79426 0 0 0 0 0 t 0 0 0 0 0 17.7324 8.40263 7.97553 3.87854 3.25588 2.88211 4.18749 0.428708 0.519878 6.65898 25.3429 0 0 0 0 0

M08299_2.00_shift2 (KLF12)
; oligos_6nt_mkv4_m3 versus M08299_2.00 (KLF12); m=194/201; ncol2=15; w=-6; offset=-6; strand=D; shift=2; score=0.41008; --cccgGCCmCGCCCcb---- ; cor=; Ncor= a 0 0 7.6152 9.2184 19.8397 16.8337 12.2244 6.2124 4.4088 30.6613 0 14.2285 0 0 0 19.0381 10.2204 0 0 0 0 c 0 0 60.7214 55.3106 39.479 23.6473 5.01 87.3747 87.1743 63.3267 100 0.2004 100 100 86.7735 55.1102 32.6653 0 0 0 0 g 0 0 20.2405 17.2345 20.4409 49.8998 77.7555 3.8076 0.4008 5.6112 0 78.5571 0 0 0 10.8216 31.4629 0 0 0 0 t 0 0 11.4228 18.2365 20.2405 9.6192 5.01 2.6052 8.016 0.4008 0 7.014 0 0 13.2265 15.0301 25.6513 0 0 0 0

M04400_2.00_shift5 (KLF6)
; oligos_6nt_mkv4_m3 versus M04400_2.00 (KLF6); m=195/201; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.409569; -----srcCACRCCCm----- ; cor=; Ncor= a 0 0 0 0 0 20.2099 36.7282 17.18 14.1084 84.4376 0 31.8408 0 1.09794 3.03549 43.5675 0 0 0 0 0 c 0 0 0 0 0 28.4672 17.3882 66.1836 71.5872 10.9399 98.917 0 100 96.267 93.7153 30.3376 0 0 0 0 0 g 0 0 0 0 0 28.5584 41.0575 10.0242 9.7322 2.31125 0 68.1592 0 2.63505 0.51304 2.37226 0 0 0 0 0 t 0 0 0 0 0 22.7646 4.82612 6.61232 4.57218 2.31125 1.08303 0 0 0 2.73621 23.7226 0 0 0 0 0

M04401_2.00_shift5 (KLF6)
; oligos_6nt_mkv4_m3 versus M04401_2.00 (KLF6); m=196/201; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.407885; -----yRCCACGCCCh----- ; cor=; Ncor= a 0 0 0 0 0 16.1856 25.313 3.89228 0.376832 78.7906 0 19.1863 0 0 0.255587 32.9455 0 0 0 0 0 c 0 0 0 0 0 29.9023 0.915282 94.0248 93.559 4.83662 99.8808 0 100 100 87.8629 25.1809 0 0 0 0 0 g 0 0 0 0 0 21.444 72.8637 0.785469 5.94557 16.3728 0.119198 80.8137 0 0 0.327675 12.0459 0 0 0 0 0 t 0 0 0 0 0 32.4681 0.907959 1.29743 0.118632 0 0 0 0 0 11.5538 29.8277 0 0 0 0 0

M04530_2.00_shift2 (ZNF444)
; oligos_6nt_mkv4_m3 versus M04530_2.00 (ZNF444); m=197/201; ncol2=16; w=-6; offset=-6; strand=D; shift=2; score=0.402606; --ccrtCCCCCTCCCCCm--- ; cor=; Ncor= a 0 0 14.2547 10.0366 35.0522 21.7179 0.373886 0.461095 0.373778 0 0.78853 0.358372 0.387041 0.13002 0.628661 0.311791 0.45977 29.0635 0 0 0 c 0 0 44.11 65.1368 5.80812 13.4159 99.0653 99.3228 99.1518 99.812 98.7814 0.874427 98.9392 99.7544 98.6998 95.7058 98.9943 42.1769 0 0 0 g 0 0 21.5485 11.3731 56.9684 0.675169 0.345125 0.0432277 0 0 0.157706 0.0286697 0.0716743 0.0866802 0.171453 0 0.445402 9.19091 0 0 0 t 0 0 20.0868 13.4535 2.17126 64.191 0.215703 0.172911 0.474411 0.18797 0.272401 98.7385 0.602064 0.0288934 0.500071 3.98243 0.100575 19.5687 0 0 0

M04419_2.00_shift5 (KLF3)
; oligos_6nt_mkv4_m3 versus M04419_2.00 (KLF3); m=198/201; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.402481; -----grCCACGCCCw----- ; cor=; Ncor= a 0 0 0 0 0 15.9938 47.08 3.29544 1.0131 76.5579 13.8831 6.9486 0.709143 0.996102 0.88967 38.8752 0 0 0 0 0 c 0 0 0 0 0 8.49124 2.77719 91.1855 96.5735 3.99882 84.6798 3.09459 98.5601 98.5654 96.9954 22.0684 0 0 0 0 0 g 0 0 0 0 0 60.2076 49.233 4.14183 0.896409 17.282 0.088368 86.4161 0.357278 0.438502 0.559374 11.902 0 0 0 0 0 t 0 0 0 0 0 15.3073 0.90986 1.37727 1.517 2.1613 1.34877 3.54075 0.373518 0 1.55559 27.1544 0 0 0 0 0

M07758_2.00_shift10 (ZNF425)
; oligos_6nt_mkv4_m3 versus M07758_2.00 (ZNF425); m=199/201; ncol2=7; w=0; offset=2; strand=D; shift=10; score=0.400982; ----------sGCCCTC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 50 0 100 100 100 0 100 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 50 100 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0

M06163_2.00_shift5 (M06163_2.00)
; oligos_6nt_mkv4_m3 versus M06163_2.00; m=200/201; ncol2=10; w=-3; offset=-3; strand=D; shift=5; score=0.40086; -----rrchmCRCCC------ ; cor=; Ncor= a 0 0 0 0 0 35.7143 37.5 18.75 37.5 62.5 0 31.25 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 12.5 62.5 31.25 37.5 100 0 100 100 100 0 0 0 0 0 0 g 0 0 0 0 0 64.2857 43.75 12.5 0 0 0 68.75 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 6.25 6.25 31.25 0 0 0 0 0 0 0 0 0 0 0 0

M04529_2.00_shift2 (ZNF444)
; oligos_6nt_mkv4_m3 versus M04529_2.00 (ZNF444); m=201/201; ncol2=16; w=-6; offset=-6; strand=D; shift=2; score=0.400464; --ccGTCCCCCTCCCCCm--- ; cor=; Ncor= a 0 0 18.4334 8.68599 21.0837 15.4828 0.210084 0.26866 0.175152 0.0233454 0.687886 0.418118 0.0700853 0.21028 0.0935126 0.287158 0.174948 26.0202 0 0 0 c 0 0 36.7144 67.4881 6.29233 11.9161 99.288 99.5211 99.5213 99.4631 99.1139 0.778165 99.5795 99.5794 99.6143 94.8771 99.4868 44.137 0 0 0 g 0 0 24.6717 10.7262 70.035 1.145 0.233427 0.093447 0 0.163418 0.0466364 0.139373 0 0.0350467 0.0935126 0.160809 0.0349895 7.24672 0 0 0 t 0 0 20.1806 13.0997 2.58903 71.4561 0.268441 0.116809 0.303596 0.350181 0.151568 98.6643 0.350426 0.175234 0.198714 4.67494 0.303242 22.5962 0 0 0

One-to-n matrix alignment; reference matrix: positions_7nt_m3_shift8 ; 155 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
positions_7nt_m3_shift8 (positions_7nt_m3)
; positions_7nt_m3; m=0 (reference); ncol1=11; shift=8; ncol=19; --------csCTCCCCCgs ; Alignment reference a 0 0 0 0 0 0 0 0 1897 2563 64 86 293 300 258 733 68 3148 1946 c 0 0 0 0 0 0 0 0 6412 5906 14069 0 14209 13356 13001 12415 13819 3111 6267 g 0 0 0 0 0 0 0 0 3582 3899 450 601 79 804 1177 1327 677 5991 4161 t 0 0 0 0 0 0 0 0 2713 2236 21 13917 23 144 168 129 40 2354 2230

M08358_2.00_shift8 (ZNF467)
; positions_7nt_m3 versus M08358_2.00 (ZNF467); m=1/154; ncol2=12; w=0; offset=0; strand=D; shift=8; score=0.825576; --------CCCTCCCCCyC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1.11257 0.850785 0.065445 0.065445 0.065445 1.37435 0.065445 0.065445 1.37435 18.6518 2.94503 c 0 0 0 0 0 0 0 0 74.411 87.7618 99.8037 0.065445 85.6675 93.5209 89.3325 84.3586 73.6257 34.8822 79.6466 g 0 0 0 0 0 0 0 0 4.25393 0.065445 0.065445 0.850785 3.46859 0.065445 1.11257 0.065445 1.63613 10.2749 5.03927 t 0 0 0 0 0 0 0 0 20.2225 11.322 0.065445 99.0183 10.7984 5.03927 9.48953 15.5105 23.3639 36.1911 12.3691

M00249_2.00_shift9 (WT1)
; positions_7nt_m3 versus M00249_2.00 (WT1); m=2/154; ncol2=11; w=0; offset=1; strand=D; shift=9; score=0.790666; ---------mCyCCCCCrc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.7654 9.76681 2.48942 0.022935 0.022935 0.022935 9.70563 0.022935 25.8716 15.2561 c 0 0 0 0 0 0 0 0 0 29.4673 70.6996 32.473 99.9312 99.9312 99.9312 90.2485 99.9312 15.4144 54.2316 g 0 0 0 0 0 0 0 0 0 19.8837 9.76681 2.48942 0.022935 0.022935 0.022935 0.022935 0.022935 53.5748 15.2561 t 0 0 0 0 0 0 0 0 0 19.8837 9.76681 62.5481 0.022935 0.022935 0.022935 0.022935 0.022935 5.13927 15.2561

M00139_2.00_shift9 (M00139_2.00)
; positions_7nt_m3 versus M00139_2.00; m=3/154; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.762727; ---------cmwCCCCCmh ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 17.3942 26.206 44.9152 3.32464 2.67398 1.01422 1.97029 2.08507 36.1848 29.3413 c 0 0 0 0 0 0 0 0 0 56.0438 41.9294 5.39124 92.8851 95.9251 96.9428 95.4098 95.0881 40.3922 35.4809 g 0 0 0 0 0 0 0 0 0 13.0154 12.2557 15.4063 2.29645 0.721493 0.138639 0.801061 1.20298 5.63298 9.66968 t 0 0 0 0 0 0 0 0 0 13.5466 19.609 34.2873 1.49386 0.679476 1.90431 1.81881 1.62386 17.79 25.5081

M08107_2.00_rc_shift8 (E2F6_rc)
; positions_7nt_m3 versus M08107_2.00_rc (E2F6_rc); m=4/154; ncol2=11; w=0; offset=0; strand=R; shift=8; score= 0.7393; --------byyTCCCGCCy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 13.4567 6.52884 0 0 0 0 0 4.75154 0 0 16.6485 c 0 0 0 0 0 0 0 0 32.9706 41.1679 38.8466 0 98.2227 100 99.7461 0 100 69.2419 50.9975 g 0 0 0 0 0 0 0 0 25.6075 16.4672 0 0 1.05187 0 0 70.8741 0 14.7262 2.9017 t 0 0 0 0 0 0 0 0 27.9652 35.8361 61.1534 100 0.725426 0 0.253899 24.3743 0 16.0319 29.4523

M08349_2.00_shift10 (EGR3)
; positions_7nt_m3 versus M08349_2.00 (EGR3); m=5/154; ncol2=9; w=0; offset=2; strand=D; shift=10; score=0.720903; ----------CkCCYCCdC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0647668 21.8264 0.0647668 0.0647668 0.0647668 18.1995 0.0647668 29.5984 0.0647668 c 0 0 0 0 0 0 0 0 0 0 99.8057 0.0647668 99.8057 99.8057 73.6399 81.671 99.8057 0.0647668 75.7124 g 0 0 0 0 0 0 0 0 0 0 0.0647668 49.0285 0.0647668 0.0647668 0.0647668 0.0647668 0.0647668 40.2202 24.158 t 0 0 0 0 0 0 0 0 0 0 0.0647668 29.0803 0.0647668 0.0647668 26.2306 0.0647668 0.0647668 30.1166 0.0647668

M00133_2.00_shift8 (M00133_2.00)
; positions_7nt_m3 versus M00133_2.00; m=6/154; ncol2=10; w=0; offset=0; strand=D; shift=8; score=0.709935; --------cmCgCCCmcy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.0214 42.3407 2.97602 15.6909 0.0767376 0.0263797 0.0433909 29.6789 10.202 20.7575 0 c 0 0 0 0 0 0 0 0 45.8577 50.1866 90.9753 1.40928 98.7545 99.967 83.3039 56.2855 54.1945 29.7523 0 g 0 0 0 0 0 0 0 0 11.8882 2.87413 2.48578 66.892 0.00389772 0.00304224 0.00127157 1.35045 11.9721 14.923 0 t 0 0 0 0 0 0 0 0 21.2327 4.59858 3.56295 16.0079 1.1649 0 16.6514 12.6852 23.6315 34.5672 0

M08109_2.00_rc_shift8 (E2F4_rc)
; positions_7nt_m3 versus M08109_2.00_rc (E2F4_rc); m=7/154; ncol2=11; w=0; offset=0; strand=R; shift=8; score=0.700071; --------yyyTCCCGCsc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.4888 5.16507 0 0 0 0 0 0 0 0 20.6603 c 0 0 0 0 0 0 0 0 32.8009 38.3387 33.2801 3.99361 97.0181 86.9542 100 0 99.4143 64.59 45.1544 g 0 0 0 0 0 0 0 0 20.9265 18.5836 0 0 2.18317 11.6081 0 100 0.585729 27.1565 19.7018 t 0 0 0 0 0 0 0 0 26.7838 37.9127 66.7199 96.0064 0.798722 1.4377 0 0 0 8.25346 14.4835

M02891_2.00_shift9 (ZNF740)
; positions_7nt_m3 versus M02891_2.00 (ZNF740); m=8/154; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.691214; ---------mCCCCCCCAc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 27.3826 7.78087 6.20484 0.948509 0.902527 0.361991 2.33996 4.5264 68.0266 12.4568 c 0 0 0 0 0 0 0 0 0 46.2576 85.391 91.4152 97.1545 97.0668 97.3303 94.9669 90.1509 18.5642 61.8815 g 0 0 0 0 0 0 0 0 0 17.7592 1.07185 0.297493 0.361337 0.541516 0.950226 1.6777 0.963956 3.60531 5.29344 t 0 0 0 0 0 0 0 0 0 8.60065 5.75625 2.08245 1.53568 1.48917 1.35747 1.01545 4.35876 9.80392 20.3682

M08866_2.00_shift8 (SALL4)
; positions_7nt_m3 versus M08866_2.00 (SALL4); m=9/154; ncol2=10; w=0; offset=0; strand=D; shift=8; score=0.689932; --------CcCwCCChsc- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 4.4 22.6 0.4 58.6 1.4 1.2 1.4 29 13 16.8 0 c 0 0 0 0 0 0 0 0 81.4 66 98.8 1 80.4 98.2 97.2 34.4 47.8 51.4 0 g 0 0 0 0 0 0 0 0 2.4 1.6 0.2 3 16.2 0.4 0.2 0.6 25.8 13.8 0 t 0 0 0 0 0 0 0 0 11.8 9.8 0.6 37.4 2 0.2 1.2 36 13.4 18 0

M08979_2.00_shift8 (M08979_2.00)
; positions_7nt_m3 versus M08979_2.00; m=10/154; ncol2=10; w=0; offset=0; strand=D; shift=8; score=0.689932; --------CcCwCCChsc- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 4.4 22.6 0.4 58.6 1.4 1.2 1.4 29 13 16.8 0 c 0 0 0 0 0 0 0 0 81.4 66 98.8 1 80.4 98.2 97.2 34.4 47.8 51.4 0 g 0 0 0 0 0 0 0 0 2.4 1.6 0.2 3 16.2 0.4 0.2 0.6 25.8 13.8 0 t 0 0 0 0 0 0 0 0 11.8 9.8 0.6 37.4 2 0.2 1.2 36 13.4 18 0

M09038_2.00_rc_shift9 (M09038_2.00_rc)
; positions_7nt_m3 versus M09038_2.00_rc; m=11/154; ncol2=10; w=0; offset=1; strand=R; shift=9; score=0.688093; ---------syTCCCGCsc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 5.62249 0.200803 0.401606 0.200803 0.803213 0.401606 0.803213 1.60643 0.200803 13.0522 c 0 0 0 0 0 0 0 0 0 47.1888 47.1888 0.803213 92.1687 96.1847 94.5783 0 95.3815 61.8474 57.0281 g 0 0 0 0 0 0 0 0 0 26.3052 8.43373 0.401606 1.00402 2.61044 3.01205 91.7671 2.40964 25.7028 11.245 t 0 0 0 0 0 0 0 0 0 20.8835 44.1767 98.3936 6.62651 0.401606 2.00803 7.42972 0.60241 12.249 18.6747

M00776_2.00_shift9 (M00776_2.00)
; positions_7nt_m3 versus M00776_2.00; m=12/154; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.687765; ---------mcgCCCmCgy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 28.0343 15.9193 23.9553 8.00057 1.93417 3.06438 62.2598 2.16924 21.9875 14.4571 c 0 0 0 0 0 0 0 0 0 40.1824 56.1223 8.72499 89.078 91.8062 79.0315 27.6968 92.2383 7.03203 46.117 g 0 0 0 0 0 0 0 0 0 12.2243 9.27695 49.2146 0.00744296 5.58274 1.29673 5.37263 2.25777 55.1731 13.3455 t 0 0 0 0 0 0 0 0 0 19.5589 18.6815 18.1051 2.91396 0.67684 16.6074 4.67074 3.33468 15.8074 26.0804

M04509_2.00_shift6 (ZNF281)
; positions_7nt_m3 versus M04509_2.00 (ZNF281); m=13/154; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.687662; ------gCCCCTCCCCCa- ; cor=; Ncor= a 0 0 0 0 0 0 11.2647 2.15385 4.33229 0.138504 6.92892 2.06233 0 1.67286 3.41696 3.75881 5.06993 67.5349 0 c 0 0 0 0 0 0 14.7892 92.2198 93.9705 98.2918 91.0148 0 99.8126 98.3271 91.263 81.9107 92.5699 23.0233 0 g 0 0 0 0 0 0 61.2647 0.835165 1.25056 0 0.49173 0 0.0937207 0 1.25433 5.91229 0 1.67442 0 t 0 0 0 0 0 0 12.6814 4.79121 0.446628 1.56971 1.5646 97.9377 0.0937207 0 4.06574 8.41817 2.36014 7.76744 0

M08302_2.00_shift10 (EGR2)
; positions_7nt_m3 versus M08302_2.00 (EGR2); m=14/154; ncol2=9; w=0; offset=2; strand=D; shift=10; score=0.687446; ----------CgCCCmCdC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0739645 23.1509 0.0739645 0.0739645 0.0739645 37.9438 0.0739645 28.4763 0.0739645 c 0 0 0 0 0 0 0 0 0 0 99.7781 0.0739645 99.7781 99.7781 84.0976 61.9083 99.7781 0.0739645 89.1272 g 0 0 0 0 0 0 0 0 0 0 0.0739645 55.6953 0.0739645 0.0739645 0.0739645 0.0739645 0.0739645 45.932 10.7249 t 0 0 0 0 0 0 0 0 0 0 0.0739645 21.0799 0.0739645 0.0739645 15.7544 0.0739645 0.0739645 25.5178 0.0739645

M02892_2.00_shift9 (ZNF740)
; positions_7nt_m3 versus M02892_2.00 (ZNF740); m=15/154; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.685097; ---------cCCCCCCCAc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 19.8051 2.29439 1.13194 1.38249 5.04422 0.612944 0.899119 1.61807 72.652 7.5187 c 0 0 0 0 0 0 0 0 0 57.0798 95.976 96.1797 96.3843 89.0599 98.035 97.7882 91.6568 7.02739 67.8055 g 0 0 0 0 0 0 0 0 0 16.0537 0.352983 1.04351 1.08118 2.86603 0.757166 0.143859 1.1967 7.08083 3.35411 t 0 0 0 0 0 0 0 0 0 7.06142 1.37663 1.64485 1.15207 3.02981 0.594916 1.16885 5.5284 13.2398 21.3217

M02935_2.00_shift9 (M02935_2.00)
; positions_7nt_m3 versus M02935_2.00; m=16/154; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.68249; ---------mCCCCCCCac ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.3121 18.5904 16.9679 4.701 3.83543 6.26236 7.45322 11.3504 67.0956 16.2721 c 0 0 0 0 0 0 0 0 0 34.1858 70.7181 77.5219 91.9115 92.7127 87.6401 84.3324 77.3865 10.4971 53.3507 g 0 0 0 0 0 0 0 0 0 22.1888 2.79255 0.670554 0.829589 0.27894 1.35135 3.8059 3.11409 6.98965 7.0626 t 0 0 0 0 0 0 0 0 0 13.3133 7.89894 4.83965 2.5579 3.17294 4.74621 4.4085 8.14901 15.4176 23.3146

M09515_2.00_shift8 (M09515_2.00)
; positions_7nt_m3 versus M09515_2.00; m=17/154; ncol2=12; w=0; offset=0; strand=D; shift=8; score=0.676809; --------cmCrCCCACrc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.4 32.9 1.4 25.3 0.1 0.1 0.1 86.1 0.1 25.5 2.6 c 0 0 0 0 0 0 0 0 35.7 51.3 95.3 0.1 99.7 99.7 94.3 13.7 99.7 3.5 67.8 g 0 0 0 0 0 0 0 0 19.2 6.6 0.1 58.7 0.1 0.1 0.1 0.1 0.1 55.2 18.2 t 0 0 0 0 0 0 0 0 24.8 9.2 3.2 15.9 0.1 0.1 5.5 0.1 0.1 15.8 11.4

M04510_2.00_shift6 (ZNF281)
; positions_7nt_m3 versus M04510_2.00 (ZNF281); m=18/154; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.673884; ------rCCCmTCCCCCr- ; cor=; Ncor= a 0 0 0 0 0 0 26.988 15.4793 12.0417 1.77179 33.1018 15.3637 4.31528 5.19077 15.1746 16.4008 6.88917 27.1103 0 c 0 0 0 0 0 0 6.55738 70.9328 80.4375 96.1729 59.0519 0.0777907 89.432 89.8181 71.7682 69.4927 86.564 11.3775 0 g 0 0 0 0 0 0 58.4781 7.34484 3.875 1.25207 4.72007 6.06768 3.941 3.54925 7.16939 6.30937 2.48181 49.3761 0 t 0 0 0 0 0 0 7.97651 6.24311 3.64583 0.803213 3.12628 78.4909 2.31176 1.44188 5.88782 7.7971 4.06504 12.136 0

M04438_2.00_shift8 (EGR1)
; positions_7nt_m3 versus M04438_2.00 (EGR1); m=19/154; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.671748; --------cmCrCCCmCgc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.812 28.5357 7.63283 29.7004 2.48685 4.75973 4.16748 54.8634 0.170648 22.7166 8.27459 c 0 0 0 0 0 0 0 0 41.1735 47.1176 78.0531 7.48997 94.1416 90.0915 77.0299 32.5111 95.9776 13.8829 66.0792 g 0 0 0 0 0 0 0 0 16.2306 10.4727 2.55749 46.4378 0.908656 2.746 4.40227 6.24303 0 42.2063 8.17388 t 0 0 0 0 0 0 0 0 22.7838 13.8739 11.7565 16.3718 2.46294 2.40275 14.4003 6.38239 3.85178 21.1943 17.4723

M00230_2.00_shift9 (EGR2)
; positions_7nt_m3 versus M00230_2.00 (EGR2); m=20/154; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.668049; ---------mcrCCCmccy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.4696 12.7214 30.8306 6.07116 0.756708 7.19322 39.7106 8.59421 16.1831 12.8811 c 0 0 0 0 0 0 0 0 0 37.5897 53.1588 7.45219 86.795 95.7003 69.626 41.7466 67.4299 63.6863 47.7397 g 0 0 0 0 0 0 0 0 0 12.5125 11.1706 43.7507 0.00921935 3.22593 2.41848 9.03963 6.49536 5.77749 10.1326 t 0 0 0 0 0 0 0 0 0 19.4283 22.9492 17.9665 7.12457 0.317024 20.7623 9.50311 17.4805 14.3531 29.2466

M04628_2.00_shift7 (ZNF460)
; positions_7nt_m3 versus M04628_2.00 (ZNF460); m=21/154; ncol2=13; w=-1; offset=-1; strand=D; shift=7; score=0.653969; -------caaCgCCCCCCs ; cor=; Ncor= a 0 0 0 0 0 0 0 15.4613 40.5896 59.0674 9.85222 9.84802 3.35946 5.41761 3.78198 7.64263 5.35308 2.81532 23.9674 c 0 0 0 0 0 0 0 47.8803 24.8677 23.9378 78.9163 20.6687 89.6976 90.4063 89.099 86.2217 91.2301 90.2027 26.925 g 0 0 0 0 0 0 0 23.5661 19.9546 9.63731 3.94089 48.693 1.34378 0.790068 4.33815 3.12164 1.93622 2.81532 40.8465 t 0 0 0 0 0 0 0 13.0923 14.5881 7.35751 7.29064 20.7903 5.5991 3.386 2.78087 3.01399 1.48064 4.16667 8.26109

M08906_2.00_shift6 (ZNF281)
; positions_7nt_m3 versus M08906_2.00 (ZNF281); m=22/154; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score=0.650439; ------yCCCCTCCCCCwc ; cor=; Ncor= a 0 0 0 0 0 0 9.12863 2.48963 1.65975 1.03734 12.8631 12.6556 0.414938 0.622407 0.622407 1.65975 1.03734 47.0954 14.1079 c 0 0 0 0 0 0 27.1784 87.3444 94.1909 97.9253 74.0664 0.207469 96.473 97.9253 89.6266 97.5104 96.888 17.4274 50.8299 g 0 0 0 0 0 0 24.8963 1.65975 0.622407 0 0.207469 10.9959 0.414938 0.414938 1.65975 0.414938 0.829876 7.67635 18.0498 t 0 0 0 0 0 0 38.7967 8.50622 3.52697 1.03734 12.8631 76.1411 2.6971 1.03734 8.09129 0.414938 1.24481 27.8008 17.0124

M01917_2.00_rc_shift11 (M01917_2.00_rc)
; positions_7nt_m3 versus M01917_2.00_rc; m=23/154; ncol2=8; w=0; offset=3; strand=R; shift=11; score=0.650024; -----------tCCCCCCc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 10.8757 6.35513 3.18153 0.801333 3.97493 2.38813 7.38283 7.34593 c 0 0 0 0 0 0 0 0 0 0 0 23.9135 78.5544 81.728 97.596 93.629 87.2818 68.0187 62.3716 g 0 0 0 0 0 0 0 0 0 0 0 17.3946 7.94192 8.73532 1.59473 2.38813 8.73532 20.4933 17.434 t 0 0 0 0 0 0 0 0 0 0 0 47.8162 7.14852 6.35513 0.00793399 0.00793399 1.59473 4.10521 12.8485

M08999_2.00_shift7 (M08999_2.00)
; positions_7nt_m3 versus M08999_2.00; m=24/154; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.649147; -------CCCCTCCCCCac ; cor=; Ncor= a 0 0 0 0 0 0 0 1.8 1 0 8.4 16.6 0 0 0 0 0 62.8 18.4 c 0 0 0 0 0 0 0 95.8 98.6 99.8 86.6 0.4 100 100 98.8 99.2 100 23.6 61.6 g 0 0 0 0 0 0 0 0.6 0 0 0 3.8 0 0 0 0 0 2.8 6.8 t 0 0 0 0 0 0 0 1.8 0.4 0.2 5 79.2 0 0 1.2 0.8 0 10.8 13.2

M09523_2.00_rc_shift8 (E2F6_rc)
; positions_7nt_m3 versus M09523_2.00_rc (E2F6_rc); m=25/154; ncol2=10; w=0; offset=0; strand=R; shift=8; score=0.648649; --------syyTCCCGCb- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.3 16.4 7.5 0.1 2.6 11.1 2.9 10.4 0.4 5.1 0 c 0 0 0 0 0 0 0 0 30 28.9 26.2 5 86.7 76.8 81.9 2.7 92.2 43.4 0 g 0 0 0 0 0 0 0 0 25.7 17.5 4.6 1.2 6.3 6.1 14.2 73.2 4 26.2 0 t 0 0 0 0 0 0 0 0 20 37.2 61.7 93.7 4.4 6 1 13.7 3.4 25.4 0

M07717_2.00_shift8 (ZNF441)
; positions_7nt_m3 versus M07717_2.00 (ZNF441); m=26/154; ncol2=12; w=0; offset=0; strand=D; shift=8; score=0.648277; --------rrCTCCGcCyC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.6892 47.4099 0.112613 0.112613 0.112613 0.112613 0.112613 0.563063 0.112613 0.563063 0.112613 c 0 0 0 0 0 0 0 0 18.5811 1.46396 99.6622 21.2838 99.6622 99.6622 0.112613 65.4279 80.7432 56.4189 69.9324 g 0 0 0 0 0 0 0 0 48.3108 51.0135 0.112613 0.112613 0.112613 0.112613 99.6622 10.9234 7.77027 6.41892 20.3829 t 0 0 0 0 0 0 0 0 6.41892 0.112613 0.112613 78.491 0.112613 0.112613 0.112613 23.0856 11.3739 36.5991 9.57207

M08025_2.00_shift7 (M08025_2.00)
; positions_7nt_m3 versus M08025_2.00; m=27/154; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.648269; -------CCCCTCCCCCmc ; cor=; Ncor= a 0 0 0 0 0 0 0 2.8571 0 0 6.66669 22.8571 0 0.9524 0.9524 3.8095 5.7143 59.0477 24.7619 c 0 0 0 0 0 0 0 94.2857 82.8571 100 80.9523 0.9524 100 98.0952 93.3333 93.3333 94.2857 27.619 45.7143 g 0 0 0 0 0 0 0 1.9048 0 0 0 4.7619 0 0 0.9524 0.9524 0 2.8571 17.1429 t 0 0 0 0 0 0 0 0.9524 17.1429 0 12.381 71.4286 0 0.9524 4.7619 1.9048 0 10.4762 12.381

M04437_2.00_shift8 (EGR1)
; positions_7nt_m3 versus M04437_2.00 (EGR1); m=28/154; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.644985; --------cmCrCCCmCgC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.713 33.137 9.66458 31.2385 1.54779 2.98439 5.56261 59.4771 0.032352 17.4956 7.29218 c 0 0 0 0 0 0 0 0 39.8983 41.6636 73.5642 8.67825 97.2874 93.3119 77.4321 33.5479 98.625 13.0649 74.9754 g 0 0 0 0 0 0 0 0 15.8413 12.5506 6.11728 48.8111 0.191479 1.72942 1.0414 4.23373 0.210288 60.1638 5.01722 t 0 0 0 0 0 0 0 0 19.5474 12.6488 10.654 11.2721 0.973352 1.97429 15.9639 2.7412 1.13232 9.27571 12.7152

M09043_2.00_rc_shift8 (M09043_2.00_rc)
; positions_7nt_m3 versus M09043_2.00_rc; m=29/154; ncol2=12; w=0; offset=0; strand=R; shift=8; score=0.643943; --------cyyTCCCGCCm ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10.7682 5.02773 0.606722 0.199908 1.0347 0.805946 2.3994 2.4233 0.623281 1.47737 27.3399 c 0 0 0 0 0 0 0 0 48.3293 51.9152 35.8988 18.67 96.9688 91.8483 88.9192 0.223295 94.011 71.9488 46.0562 g 0 0 0 0 0 0 0 0 22.2715 17.0811 5.2133 0.31514 0.968297 6.48752 2.89362 85.7663 2.82431 11.8017 6.42487 t 0 0 0 0 0 0 0 0 18.631 25.976 58.2812 80.8149 1.02822 0.858185 5.78776 11.5871 2.54144 14.7722 20.179

M05860_2.00_shift7 (M05860_2.00)
; positions_7nt_m3 versus M05860_2.00; m=30/154; ncol2=13; w=-1; offset=-1; strand=D; shift=7; score=0.640125; -------cymCGCCCmCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 22.4 21 32.6 1 22.2 0.1 0.1 0.1 64.5 0.1 12.8 3.5 c 0 0 0 0 0 0 0 32.3 31.8 51.5 93.5 0.7 99.7 99.8 92.1 35.1 99.8 3.2 71.6 g 0 0 0 0 0 0 0 22.9 19.3 8.6 0.9 69.5 0.1 0.1 0.1 0.2 0.1 71 7.5 t 0 0 0 0 0 0 0 22.4 27.9 7.3 4.6 7.6 0.1 0.1 7.7 0.1 0.1 13.1 17.5

M08996_2.00_shift7 (M08996_2.00)
; positions_7nt_m3 versus M08996_2.00; m=31/154; ncol2=14; w=-1; offset=-1; strand=D; shift=7; score=0.630492; -------cyCCgCCCmCgC ; cor=; Ncor= a 0 0 0 0 0 0 0 10.5691 10.3659 16.8699 0.406504 23.9837 0 0.609756 0 44.9187 1.01626 16.2602 1.42276 c 0 0 0 0 0 0 0 57.7236 54.878 77.8455 98.9837 0 100 98.9837 96.3415 54.4715 98.7805 1.21951 89.6341 g 0 0 0 0 0 0 0 9.7561 8.53659 2.84553 0.609756 61.1789 0 0.406504 0.203252 0.203252 0 67.0732 3.86179 t 0 0 0 0 0 0 0 21.9512 26.2195 2.43902 0 14.8374 0 0 3.45528 0.406504 0.203252 15.4472 5.0813

M08994_2.00_shift6 (M08994_2.00)
; positions_7nt_m3 versus M08994_2.00; m=32/154; ncol2=14; w=-2; offset=-2; strand=D; shift=6; score=0.624465; ------ccyCCrCCCMCrC ; cor=; Ncor= a 0 0 0 0 0 0 10.6 17.6 11 19 3.2 32 0 1 0.8 68.2 1.8 31.2 4.4 c 0 0 0 0 0 0 50 52.8 54.2 73 92.4 1.4 98 98.4 92.6 29.6 95 6.8 72.8 g 0 0 0 0 0 0 17 10.8 9.6 0.8 1.6 41.8 1.8 0.4 0.4 1.4 1.2 39.8 13.4 t 0 0 0 0 0 0 22.4 18.8 25.2 7.2 2.8 24.8 0.2 0.2 6.2 0.8 2 22.2 9.4

M09034_2.00_rc_shift7 (E2F6_rc)
; positions_7nt_m3 versus M09034_2.00_rc (E2F6_rc); m=33/154; ncol2=13; w=-1; offset=-1; strand=R; shift=7; score=0.624425; -------yyyyTCCCGCCy ; cor=; Ncor= a 0 0 0 0 0 0 0 13.6 12.6 7 1.6 1.2 1.2 3.2 4.8 6.6 1 2 14.8 c 0 0 0 0 0 0 0 42.6 37.8 43.8 43.6 1.4 87.2 89.6 89.4 1.2 96.4 70 55.6 g 0 0 0 0 0 0 0 16.2 21.8 10.8 3.6 3.2 4.4 4.8 1.8 70.8 1.6 12.6 3.4 t 0 0 0 0 0 0 0 27.6 27.8 38.4 51.2 94.2 7.2 2.4 4 21.4 1 15.4 26.2

M10133_2.00_shift11 (MZF1)
; positions_7nt_m3 versus M10133_2.00 (MZF1); m=34/154; ncol2=8; w=0; offset=3; strand=D; shift=11; score=0.618785; -----------TCCCCmcy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 45 15 15 c 0 0 0 0 0 0 0 0 0 0 0 5 100 95 90 100 25 55 30 g 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 15 10 15 t 0 0 0 0 0 0 0 0 0 0 0 90 0 0 5 0 15 20 40

M05849_2.00_shift9 (ZNF282)
; positions_7nt_m3 versus M05849_2.00 (ZNF282); m=35/154; ncol2=11; w=0; offset=1; strand=D; shift=9; score=0.616868; ---------cmTCCCaCAC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 18.8119 44.5545 9.901 8.9109 0 0 54.4554 0 69.3069 0 c 0 0 0 0 0 0 0 0 0 45.5446 41.5842 1.9802 90.099 100 99.0099 6.9307 96.0396 24.7525 100 g 0 0 0 0 0 0 0 0 0 10.8911 3.9604 4.9505 0.9901 0 0.9901 24.7525 3.9604 2.9703 0 t 0 0 0 0 0 0 0 0 0 24.7525 9.901 83.1683 0 0 0 13.8614 0 2.9703 0

M04467_2.00_shift6 (ZNF740)
; positions_7nt_m3 versus M04467_2.00 (ZNF740); m=36/154; ncol2=13; w=-2; offset=-2; strand=D; shift=6; score=0.614616; ------cygCCCCCCCCAC ; cor=; Ncor= a 0 0 0 0 0 0 16.3462 8.51666 16.5473 3.08014 1.76844 2.31023 1.0166 1.14401 1.92819 1.04027 2.9304 83.0305 7.7469 c 0 0 0 0 0 0 49.2445 35.7951 15.4853 86.9019 96.9303 95.8086 98.3734 97.7793 96.6755 97.7852 95.9374 12.5147 71.2892 g 0 0 0 0 0 0 14.011 4.99686 55.9397 9.65909 1.2012 0.627063 0.169434 0.336474 0.49867 0.402685 0.566101 1.17233 1.33057 t 0 0 0 0 0 0 20.3984 50.6914 12.0277 0.358852 0.1001 1.25413 0.440529 0.740242 0.897606 0.771812 0.566101 3.28253 19.6334

M04469_2.00_shift6 (ZNF740)
; positions_7nt_m3 versus M04469_2.00 (ZNF740); m=37/154; ncol2=13; w=-2; offset=-2; strand=D; shift=6; score=0.613802; ------cyrCCCCCCCCAc ; cor=; Ncor= a 0 0 0 0 0 0 17.6303 12.5679 29.8318 4.99584 9.32203 1.64684 2.00182 2.10623 0.927644 0.188147 9.74576 70.5214 13.2522 c 0 0 0 0 0 0 47.5829 52.5213 14.0747 87.8435 89.4068 96.5233 95.9964 96.6117 97.8664 99.2474 89.4068 15.9759 67.5416 g 0 0 0 0 0 0 17.2512 5.58573 43.2909 3.08077 1.18644 0.365965 0.636943 0.274725 0.649351 0.28222 0.508475 4.54545 3.45711 t 0 0 0 0 0 0 17.5355 29.3251 12.8026 4.07993 0.0847458 1.46386 1.36488 1.00733 0.556586 0.28222 0.338983 8.95722 15.749

M04470_2.00_shift6 (ZNF740)
; positions_7nt_m3 versus M04470_2.00 (ZNF740); m=38/154; ncol2=13; w=-2; offset=-2; strand=D; shift=6; score=0.613717; ------cygCCCCCCCCaC ; cor=; Ncor= a 0 0 0 0 0 0 15.541 8.9477 24.4419 2.9212 3.81944 0.361011 0.433839 0.433526 0.21692 0 4.37731 67.2363 7.04148 c 0 0 0 0 0 0 48.2934 47.385 14.4533 93.5462 95.625 99.4224 99.5662 99.4942 99.5662 100 84.8952 14.2578 75.1638 g 0 0 0 0 0 0 16.7756 4.34783 52.0999 1.97011 0 0 0 0.0722543 0 0 9.98767 11.2793 1.74672 t 0 0 0 0 0 0 19.39 39.3195 9.00492 1.5625 0.555556 0.216606 0 0 0.21692 0 0.739827 7.22656 16.048

M00765_2.00_shift8 (M00765_2.00)
; positions_7nt_m3 versus M00765_2.00; m=39/154; ncol2=9; w=0; offset=0; strand=D; shift=8; score=0.612524; --------cmCGCCCMc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 17.435 41.7838 0.00455751 0.00455751 0.00455751 0.00455751 0.00455751 30.5774 7.56959 0 0 c 0 0 0 0 0 0 0 0 47.6951 58.2071 99.9863 8.49137 99.9863 91.4995 99.9863 69.4134 59.8878 0 0 g 0 0 0 0 0 0 0 0 17.435 0.00455751 0.00455751 91.4995 0.00455751 8.49137 0.00455751 0.00455751 7.56959 0 0 t 0 0 0 0 0 0 0 0 17.435 0 0 0 0 0 0 0 24.973 0 0

M07940_2.00_rc_shift9 (E2F6_rc)
; positions_7nt_m3 versus M07940_2.00_rc (E2F6_rc); m=40/154; ncol2=11; w=0; offset=1; strand=R; shift=9; score=0.611737; ---------yyTCCCGCcc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 3.8314 0 0 0 0 0 4.2146 0 0 15.7088 c 0 0 0 0 0 0 0 0 0 36.7816 37.1648 0 100 100 90.0383 0 100 62.0689 47.5096 g 0 0 0 0 0 0 0 0 0 18.3908 2.2989 0 0 0 0 83.1417 0 20.6897 12.2605 t 0 0 0 0 0 0 0 0 0 40.9962 60.5363 100 0 0 9.9617 12.6437 0 17.2414 24.5211

M07941_2.00_rc_shift9 (E2F6_rc)
; positions_7nt_m3 versus M07941_2.00_rc (E2F6_rc); m=41/154; ncol2=11; w=0; offset=1; strand=R; shift=9; score=0.609675; ---------yyTCCCGCcc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 8.59379 0 0 0.7812 0 0.3906 7.03121 0 0 19.1406 c 0 0 0 0 0 0 0 0 0 39.8438 35.5469 0 99.2188 100 99.6094 0 100 63.6719 51.5626 g 0 0 0 0 0 0 0 0 0 14.4531 0 0 0 0 0 84.7657 0 22.6562 7.03121 t 0 0 0 0 0 0 0 0 0 37.1094 64.4531 100 0 0 0 8.20311 0 13.6719 22.2656

M03706_2.00_shift6 (M03706_2.00)
; positions_7nt_m3 versus M03706_2.00; m=42/154; ncol2=13; w=-2; offset=-2; strand=D; shift=6; score=0.608851; ------GmCACGCCCmCyy ; cor=; Ncor= a 0 0 0 0 0 0 23.3211 37.4477 0.930714 69.7044 4.95466 22.5231 0.383944 1.1708 0.880339 28.9079 2.44621 18.8759 22.0495 c 0 0 0 0 0 0 4.34676 56.3408 97.5526 8.34975 91.6451 0.479945 98.7784 97.4518 92.2726 65.3429 83.407 37.5044 32.1555 g 0 0 0 0 0 0 69.1087 1.99084 0.620476 21.5025 2.16969 74.4943 0.383944 0.65427 0.945549 0.577234 0.825228 8.16543 11.6254 t 0 0 0 0 0 0 3.22344 4.22059 0.896243 0.44335 1.23057 2.50257 0.453752 0.72314 5.90153 5.17202 13.3215 35.4542 34.1696

M04462_2.00_shift8 (EGR4)
; positions_7nt_m3 versus M04462_2.00 (EGR4); m=43/154; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.604632; --------ymCGCCCMCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 18.605 38.9584 0.633624 9.8065 0 0.0572574 0 72.8326 0 16.0613 1.10299 c 0 0 0 0 0 0 0 0 42.2801 56.974 98.2963 0.322504 99.7999 99.9284 95.7088 25.7694 99.9857 1.82149 89.5344 g 0 0 0 0 0 0 0 0 10.169 1.09935 0 83.3851 0.0428878 0 0.205648 1.14763 0.0143225 74.7991 2.70617 t 0 0 0 0 0 0 0 0 28.9459 2.96826 1.07012 6.48591 0.157255 0.0143143 4.08555 0.250391 0 7.31812 6.65641

M07939_2.00_rc_shift9 (E2F6_rc)
; positions_7nt_m3 versus M07939_2.00_rc (E2F6_rc); m=44/154; ncol2=11; w=0; offset=1; strand=R; shift=9; score=0.603124; ---------yyTCCCGCcy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 9.7902 0 0 0 0 1.3986 3.4965 0 0 15.3846 c 0 0 0 0 0 0 0 0 0 34.2657 33.2168 0 97.9021 100 98.6014 0 100 65.035 47.9021 g 0 0 0 0 0 0 0 0 0 20.6294 0 0 2.0979 0 0 82.5175 0 18.8811 8.3916 t 0 0 0 0 0 0 0 0 0 35.3147 66.7832 100 0 0 0 13.986 0 16.0839 28.3217

M06073_2.00_shift7 (M06073_2.00)
; positions_7nt_m3 versus M06073_2.00; m=45/154; ncol2=14; w=-1; offset=-1; strand=D; shift=7; score=0.601674; -------mcmCrCCCmCrc ; cor=; Ncor= a 0 0 0 0 0 0 0 27.4252 23.9949 36.4842 8.51155 32.763 1.62532 0 1.66809 67.408 0.342173 30.8811 15.6544 c 0 0 0 0 0 0 0 32.4569 37.3824 47.6476 81.9076 3.89222 98.3747 100 83.2763 29.8118 99.6578 13.6869 59.0248 g 0 0 0 0 0 0 0 20.8976 15.0128 6.97177 3.84944 51.0693 0 0 0 0.25663 0 46.1078 9.83747 t 0 0 0 0 0 0 0 19.2203 23.6099 8.89649 5.73139 12.2754 0 0 15.0556 2.52352 0 9.32421 15.4833

M06072_2.00_shift7 (M06072_2.00)
; positions_7nt_m3 versus M06072_2.00; m=46/154; ncol2=14; w=-1; offset=-1; strand=D; shift=7; score=0.598395; -------hmmCGCCCmCvy ; cor=; Ncor= a 0 0 0 0 0 0 0 27.7778 26.3158 47.3684 10.5263 15.7895 0 0 0 57.8947 0 31.5789 10.5263 c 0 0 0 0 0 0 0 44.4444 47.3684 47.3684 84.2105 0 100 94.7368 100 36.8421 100 26.3158 52.6316 g 0 0 0 0 0 0 0 0 21.0526 5.26316 0 73.6842 0 5.26316 0 0 0 42.1053 5.26316 t 0 0 0 0 0 0 0 27.7778 5.26316 0 5.26316 10.5263 0 0 0 5.26316 0 0 31.5789

M07563_2.00_shift10 (ZNF263)
; positions_7nt_m3 versus M07563_2.00 (ZNF263); m=47/154; ncol2=9; w=0; offset=2; strand=D; shift=10; score=0.598218; ----------STCCTCCCy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0652742 0.0652742 0.0652742 0.848564 0.0652742 0.0652742 0.0652742 5.5483 6.33159 c 0 0 0 0 0 0 0 0 0 0 70.8225 0.0652742 82.5718 96.1488 0.0652742 99.8042 99.8042 75.5222 46.2794 g 0 0 0 0 0 0 0 0 0 0 26.6971 0.0652742 17.2977 0.0652742 0.0652742 0.0652742 0.0652742 0.0652742 19.9086 t 0 0 0 0 0 0 0 0 0 0 2.41514 99.8042 0.0652742 2.93734 99.8042 0.0652742 0.0652742 18.8642 27.4804

M00233_2.00_shift10 (EGR2)
; positions_7nt_m3 versus M00233_2.00 (EGR2); m=48/154; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.597365; ----------crCCCmCgy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 17.7414 25.6279 11.1401 0.99736 5.34589 49.217 2.94523 21.4637 12.4753 c 0 0 0 0 0 0 0 0 0 0 50.1942 8.11473 80.6845 95.3311 71.9757 40.2955 90.034 11.205 47.1698 g 0 0 0 0 0 0 0 0 0 0 11.6569 43.9776 2.18267 2.99623 2.26218 5.4534 1.9159 49.2231 14.2073 t 0 0 0 0 0 0 0 0 0 0 20.4075 22.2798 5.99273 0.675269 20.4162 5.03412 5.10483 18.1082 26.1475

M10137_2.00_shift7 (PATZ1)
; positions_7nt_m3 versus M10137_2.00 (PATZ1); m=49/154; ncol2=13; w=-1; offset=-1; strand=D; shift=7; score=0.596812; -------kgkCCCCCCCCs ; cor=; Ncor= a 0 0 0 0 0 0 0 12.8205 15.3846 17.9487 0 0 0 0 10.2564 0 5.12821 2.5641 0 c 0 0 0 0 0 0 0 15.3846 10.2564 0 100 100 97.4359 100 74.359 92.5 89.7436 71.7949 55.2632 g 0 0 0 0 0 0 0 28.2051 51.2821 51.2821 0 0 0 0 0 0 0 10.2564 31.5789 t 0 0 0 0 0 0 0 43.5897 23.0769 30.7692 0 0 2.5641 0 15.3846 7.5 5.12821 15.3846 13.1579

M04513_2.00_shift6 (KLF15)
; positions_7nt_m3 versus M04513_2.00 (KLF15); m=50/154; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.589626; ------rcCmCrCCCmcc- ; cor=; Ncor= a 0 0 0 0 0 0 28.524 19.4706 14.8438 61.7341 3.34436 26.8483 3.79323 5.3418 6.84564 33.1376 11.742 21.0788 0 c 0 0 0 0 0 0 15.5473 63.1813 75.3437 31.1753 88.6071 11.12 89.6616 90.0635 80.906 55.3028 67.6831 45.1452 0 g 0 0 0 0 0 0 49.5025 6.36792 2.3125 3.19846 1.94781 48.307 1.3016 2.24131 4.83221 2.89908 3.75044 9.50207 0 t 0 0 0 0 0 0 6.4262 10.9801 7.5 3.8921 6.1007 13.7247 5.24358 2.35338 7.41611 8.66055 16.8244 24.2739 0

M08398_2.00_shift5 (KLF14)
; positions_7nt_m3 versus M08398_2.00 (KLF14); m=51/154; ncol2=14; w=-3; offset=-3; strand=D; shift=5; score=0.587357; -----ggcCmCGCCCmCyy ; cor=; Ncor= a 0 0 0 0 0 22.5873 11.9097 9.2402 4.3121 37.7823 0 13.963 0 0 0 41.6838 2.6694 13.347 13.7577 c 0 0 0 0 0 13.7577 14.5791 60.9856 79.4661 61.3963 99.5893 0 100 100 92.4025 49.076 74.1273 45.9959 34.7023 g 0 0 0 0 0 57.2895 67.3511 7.3922 4.3121 0.8214 0 77.2074 0 0 0 0.8214 4.7228 8.0082 20.1232 t 0 0 0 0 0 6.3655 6.1602 22.3819 11.9097 0 0.4107 8.8296 0 0 7.5975 8.4189 18.4805 32.6489 31.4168

M04511_2.00_shift6 (KLF15)
; positions_7nt_m3 versus M04511_2.00 (KLF15); m=52/154; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.585714; ------vccmCgCCCmcc- ; cor=; Ncor= a 0 0 0 0 0 0 29.0396 21.2916 15.9457 54.3609 0 19.6352 0.665188 3.79702 1.63279 36.4374 11.0315 17.5305 0 c 0 0 0 0 0 0 25.3811 52.9566 65.996 34.7006 96.8981 23.1277 96.9697 93.1157 87.4375 48.7021 64.9423 48.3232 0 g 0 0 0 0 0 0 34.4893 12.1695 5.5332 3.43899 0 50.9119 0.406504 2.37757 2.53249 4.34783 7.1985 12.5381 0 t 0 0 0 0 0 0 11.0899 13.5822 12.5252 7.49948 3.10192 6.32518 1.95861 0.709723 8.3972 10.5127 16.8277 21.6082 0

M00784_2.00_shift10 (M00784_2.00)
; positions_7nt_m3 versus M00784_2.00; m=53/154; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.583711; ----------cCCCCCCay ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 17.3335 21.1796 0.0178463 0.803491 0.0177459 2.56885 12.8322 46.6398 19.5656 c 0 0 0 0 0 0 0 0 0 0 64.2411 73.1883 99.8869 96.661 98.3368 95.9145 75.336 24.84 35.2961 g 0 0 0 0 0 0 0 0 0 0 11.1634 0.0305936 0.0610562 0.072891 0.110626 0.0783521 1.32572 14.3314 12.2285 t 0 0 0 0 0 0 0 0 0 0 7.26191 5.60151 0.0341852 2.46258 1.5348 1.43829 10.5061 14.1888 32.9098

M01862_2.00_shift8 (M01862_2.00)
; positions_7nt_m3 versus M01862_2.00; m=54/154; ncol2=9; w=0; offset=0; strand=D; shift=8; score=0.582266; --------hmCGCCCmy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.7384 42.0657 0.00439598 0.00439598 0.00439598 0.00439598 0.00439598 40.0281 6.56255 0 0 c 0 0 0 0 0 0 0 0 26.8904 57.9255 99.9868 0.00439598 99.9868 99.9868 99.9868 59.9631 55.5822 0 0 g 0 0 0 0 0 0 0 0 18.4418 0.00439598 0.00439598 99.9868 0.00439598 0.00439598 0.00439598 0.00439598 6.56255 0 0 t 0 0 0 0 0 0 0 0 27.9294 0 0 0 0 0 0 0 31.2927 0 0

M00223_2.00_shift8 (KLF1)
; positions_7nt_m3 versus M00223_2.00 (KLF1); m=55/154; ncol2=9; w=0; offset=0; strand=D; shift=8; score=0.582108; --------wwybmCCCC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.7492 26.1893 24.8111 20.2632 32.7309 7.58489 13.0131 16.1177 2.67489 0 0 c 0 0 0 0 0 0 0 0 24.0083 24.9121 25.3123 28.4688 30.2144 70.5385 84.4328 79.037 78.5636 0 0 g 0 0 0 0 0 0 0 0 24.4933 23.2279 24.5642 25.2495 23.0651 0.417345 1.38535 4.22034 1.05539 0 0 t 0 0 0 0 0 0 0 0 25.7492 25.6707 25.3123 26.0185 13.9897 21.4593 1.16877 0.62495 17.7061 0 0

M08321_2.00_shift5 (ZNF281)
; positions_7nt_m3 versus M08321_2.00 (ZNF281); m=56/154; ncol2=12; w=-3; offset=-3; strand=D; shift=5; score=0.582074; -----ybCCCCTCCCCC-- ; cor=; Ncor= a 0 0 0 0 0 9.89583 12.5744 0.967262 1.86012 0.0744048 10.4911 9.59821 0.0744048 0.0744048 0.0744048 0.0744048 0.0744048 0 0 c 0 0 0 0 0 39.3601 27.753 92.3363 96.2054 99.7768 77.1577 0.0744048 99.7768 99.7768 96.2054 99.7768 99.7768 0 0 g 0 0 0 0 0 24.4792 27.1577 2.75298 0.0744048 0.0744048 0.0744048 17.0387 0.0744048 0.0744048 0.0744048 0.0744048 0.0744048 0 0 t 0 0 0 0 0 26.2649 32.5149 3.94345 1.86012 0.0744048 12.2768 73.2887 0.0744048 0.0744048 3.64583 0.0744048 0.0744048 0 0

M00143_2.00_shift10 (M00143_2.00)
; positions_7nt_m3 versus M00143_2.00; m=57/154; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.579969; ----------ccCCCCCay ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 23.4762 22.5596 3.46737 4.55575 4.44789 11.7815 6.04568 40.4091 24.0527 c 0 0 0 0 0 0 0 0 0 0 48.715 67.0984 90.3233 89.6927 84.1356 86.1883 87.2994 15.0151 29.9716 g 0 0 0 0 0 0 0 0 0 0 10.7616 2.68092 2.81059 0.0747497 2.18678 0.285514 0.548452 20.0665 17.4659 t 0 0 0 0 0 0 0 0 0 0 17.0472 7.66113 3.39871 5.67681 9.22973 1.74462 6.10644 24.5093 28.5098

M00241_2.00_shift9 (KLF11)
; positions_7nt_m3 versus M00241_2.00 (KLF11); m=58/154; ncol2=8; w=0; offset=1; strand=D; shift=9; score=0.579858; ---------mCGCCCCC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 38.4202 0.0499002 10.0299 5.03992 5.03992 0.0499002 25 0.0664894 0 0 c 0 0 0 0 0 0 0 0 0 61.4264 99.8503 10.0299 94.8603 89.8703 99.8503 74.9002 93.1516 0 0 g 0 0 0 0 0 0 0 0 0 0.0766871 0.0499002 79.8902 0.0499002 5.03992 0.0499002 0.0499002 0.0664894 0 0 t 0 0 0 0 0 0 0 0 0 0.0766871 0.0499002 0.0499002 0.0499002 0.0499002 0.0499002 0.0499002 6.71543 0 0

M00242_2.00_shift9 (KLF11)
; positions_7nt_m3 versus M00242_2.00 (KLF11); m=59/154; ncol2=8; w=0; offset=1; strand=D; shift=9; score=0.579509; ---------mCGCCCCC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 35.6838 0.052521 5.30462 5.30462 0.052521 0.052521 21.0609 0.0766871 0 0 c 0 0 0 0 0 0 0 0 0 64.1738 99.8424 10.5567 94.5903 94.5903 99.8424 78.834 92.1012 0 0 g 0 0 0 0 0 0 0 0 0 0.0712251 0.052521 84.0861 0.052521 5.30462 0.052521 0.052521 0.0766871 0 0 t 0 0 0 0 0 0 0 0 0 0.0712251 0.052521 0.052521 0.052521 0.052521 0.052521 0.052521 7.7454 0 0

M00341_2.00_shift10 (PAX6)
; positions_7nt_m3 versus M00341_2.00 (PAX6); m=60/154; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.578714; ----------sTsCCCGGs ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 4.94776 0.0443374 3.84757 1.27985 1.4569 0.642756 5.92253 3.31751 6.94236 c 0 0 0 0 0 0 0 0 0 0 46.0135 0.0456877 63.9078 93.3865 95.2316 99.2865 23.3072 5.80787 38.384 g 0 0 0 0 0 0 0 0 0 0 33.4127 0.0195276 29.8875 0.776271 3.02319 0.000919215 70.7225 90.8504 49.7814 t 0 0 0 0 0 0 0 0 0 0 15.626 99.8904 2.35712 4.55737 0.288319 0.0698091 0.0477758 0.0242149 4.8922

M09506_2.00_shift10 (EGR1)
; positions_7nt_m3 versus M09506_2.00 (EGR1); m=61/154; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.576189; ----------CrCCCMCrC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 2.4 42.2 0.1 2.4 0.1 71.6 0.1 30 0.4 c 0 0 0 0 0 0 0 0 0 0 94 1 99.7 97.3 97.1 28.2 99.7 2.3 88.2 g 0 0 0 0 0 0 0 0 0 0 0.2 41.5 0.1 0.2 0.1 0.1 0.1 52.3 3.6 t 0 0 0 0 0 0 0 0 0 0 3.4 15.3 0.1 0.1 2.7 0.1 0.1 15.4 7.8

M00622_2.00_shift10 (M00622_2.00)
; positions_7nt_m3 versus M00622_2.00; m=62/154; ncol2=8; w=0; offset=2; strand=D; shift=10; score=0.57248; ----------CgCCCmCg- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 4.20133 13.3489 0.0302663 0.0302663 0.0302663 57.5363 0.0302663 16.6805 0 c 0 0 0 0 0 0 0 0 0 0 91.5557 23.3356 99.9092 99.9092 96.8826 33.3232 99.9092 8.36106 0 g 0 0 0 0 0 0 0 0 0 0 0.0415973 56.6245 0.0302663 0.0302663 0.0302663 9.11017 0.0302663 66.5973 0 t 0 0 0 0 0 0 0 0 0 0 4.20133 6.69108 0.0302663 0.0302663 3.0569 0.0302663 0.0302663 8.36106 0

M04514_2.00_shift6 (KLF15)
; positions_7nt_m3 versus M04514_2.00 (KLF15); m=63/154; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.565042; ------GCCMCGCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 0 22.0614 15.9576 2.97039 68.0475 0 8.01932 0 0 0 34.3078 3.20988 21.9548 0 c 0 0 0 0 0 0 0 81.541 87.8529 31.9525 100 0 100 100 93.6858 61.6939 75.7059 34.0573 0 g 0 0 0 0 0 0 75.7569 0 2.87204 0 0 86.2995 0 0 0 0 0.901771 12.7407 0 t 0 0 0 0 0 0 2.18166 2.50137 6.30471 0 0 5.68116 0 0 6.31424 3.99828 20.1825 31.2472 0

M08317_2.00_shift6 (KLF10)
; positions_7nt_m3 versus M08317_2.00 (KLF10); m=64/154; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score=0.563205; ------gcCmCRCCCCCys ; cor=; Ncor= a 0 0 0 0 0 0 5.6645 19.1721 3.9216 45.098 0 29.1939 0 0.2179 0.2179 19.1721 4.5752 16.5577 11.5468 c 0 0 0 0 0 0 17.8649 64.2702 87.3638 47.4946 94.5534 0 100 99.7821 89.3246 69.0632 69.281 28.976 38.9978 g 0 0 0 0 0 0 66.2309 6.5359 1.3072 7.4074 4.5752 68.8453 0 0 0 0.6536 4.793 23.3115 27.6688 t 0 0 0 0 0 0 10.2397 10.0218 7.4074 0 0.8715 1.9608 0 0 10.4575 11.1111 21.3508 31.1547 21.7865

M04512_2.00_shift6 (KLF15)
; positions_7nt_m3 versus M04512_2.00 (KLF15); m=65/154; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.561309; ------rCCmCGCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 0 26.7918 15.1634 5.5098 65.5063 0.240964 13.6948 0.359368 0.120627 0.406939 26.0445 5.30621 13.4058 0 c 0 0 0 0 0 0 10.7319 70.854 81.1765 31.3766 99.759 1.54364 99.1854 99.8794 88.67 61.7603 71.1917 50.8454 0 g 0 0 0 0 0 0 51.6875 5.57933 9.43137 2.19937 0 81.9315 0.167705 0 0.321268 0.487805 3.16162 10.5556 0 t 0 0 0 0 0 0 10.7888 8.40322 3.88235 0.917722 0 2.83 0.287494 0 10.6018 11.7073 20.3405 25.1932 0

M08096_2.00_shift6 (SP1)
; positions_7nt_m3 versus M08096_2.00 (SP1); m=66/154; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.559419; ------gCCCCkCCCCy-- ; cor=; Ncor= a 0 0 0 0 0 0 9.81223 0 1.1335 0 0 15.5599 0 0 0 12.0678 7.46508 0 0 c 0 0 0 0 0 0 20.4488 71.1587 76.746 100 99.1642 0 100 100 76.4713 72.7845 56.8926 0 0 g 0 0 0 0 0 0 48.9008 7.35058 0 0 0 52.9425 0 0 0 0 8.40394 0 0 t 0 0 0 0 0 0 20.8381 21.4907 22.1204 0 0.835814 31.4976 0 0 23.5287 15.1477 27.2384 0 0

M07928_2.00_shift7 (EGR1)
; positions_7nt_m3 versus M07928_2.00 (EGR1); m=67/154; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.556906; -------yyCCGCCCmCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 10.2828 13.8817 14.91 0.7712 7.455 0 0 0 37.018 0 3.856 0.2571 c 0 0 0 0 0 0 0 46.7866 40.1028 76.3496 98.7147 0 100 100 94.0874 61.9537 100 0 93.3162 g 0 0 0 0 0 0 0 17.7378 19.7943 2.5707 0 88.1748 0 0 0 1.0283 0 88.689 1.7995 t 0 0 0 0 0 0 0 25.1928 26.2211 6.1697 0.5141 4.3702 0 0 5.9126 0 0 7.45501 4.6272

M00778_2.00_shift10 (M00778_2.00)
; positions_7nt_m3 versus M00778_2.00; m=68/154; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.549158; ----------cgCCCMCGc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 10.1428 18.7938 2.98506 0.0789937 0.779978 73.0394 0.052912 12.7618 6.82934 c 0 0 0 0 0 0 0 0 0 0 65.8094 3.20121 95.93 99.6449 91.9744 25.3049 99.5715 4.33385 62.2543 g 0 0 0 0 0 0 0 0 0 0 5.56648 63.6582 0.255028 0.23731 0.206286 0.836105 0.0424629 74.1771 8.0143 t 0 0 0 0 0 0 0 0 0 0 18.4814 14.3468 0.829957 0.0388368 7.03931 0.819549 0.333163 8.72729 22.9021

M02888_2.00_shift6 (KLF16)
; positions_7nt_m3 versus M02888_2.00 (KLF16); m=69/154; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.549007; ------gmCMCgCCCMC-- ; cor=; Ncor= a 0 0 0 0 0 0 21.8146 33.2964 3.5942 69.9939 3.85064 18.5102 0.493827 0.123305 0.925926 26.152 1.57094 0 0 c 0 0 0 0 0 0 17.5237 59.5713 93.4493 28.0584 94.049 6.4432 99.5062 99.3835 93.287 70.3172 79.136 0 0 g 0 0 0 0 0 0 52.8005 2.84553 0.347826 1.94766 0.991832 60.0372 0 0.493218 0.173611 1.13704 1.12911 0 0 t 0 0 0 0 0 0 7.86112 4.28677 2.6087 0 1.10852 15.0093 0 0 5.61343 2.39378 18.164 0 0

M02921_2.00_shift6 (SP1)
; positions_7nt_m3 versus M02921_2.00 (SP1); m=70/154; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.543928; ------rCCmCrCCCmc-- ; cor=; Ncor= a 0 0 0 0 0 0 46.3014 19.2941 6.62971 47.0964 0.606612 30.0733 0 0.183038 0.127065 38.9714 17.6778 0 0 c 0 0 0 0 0 0 2.23634 70.7016 75.4216 47.7062 99.0294 0.867355 99.6642 99.6034 82.9733 47.5875 51.7187 0 0 g 0 0 0 0 0 0 43.205 3.37809 1.8711 4.96516 0.181984 48.8261 0.030525 0.0610128 0 1.56416 10.4546 0 0 t 0 0 0 0 0 0 8.25724 6.62625 16.0776 0.232288 0.181984 20.2333 0.30525 0.152532 16.8996 11.877 20.1489 0 0

M02898_2.00_shift6 (SP6,SP8)
; positions_7nt_m3 versus M02898_2.00 (SP6,SP8); m=71/154; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.542566; ------rmCACgCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 0 31.1377 31.5789 12.1951 78.6982 3.88889 9.32836 2.77778 1.16279 0 51.1364 5.41667 18.6747 0 c 0 0 0 0 0 0 16.1677 66.0819 81.4634 19.5266 92.7778 13.806 92.7778 97.093 89.7849 43.75 69.5833 31.3253 0 g 0 0 0 0 0 0 46.7066 0 0 0.591716 0.555556 62.3134 3.33333 1.74419 2.15054 3.40909 8.75 0.60241 0 t 0 0 0 0 0 0 5.98802 2.33918 6.34146 1.18343 2.77778 14.5522 1.11111 0 8.06452 1.70455 16.25 49.3976 0

M10300_2.00_shift5 (SP1)
; positions_7nt_m3 versus M10300_2.00 (SP1); m=72/154; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.542034; -----vrcCCCGCCCccy- ; cor=; Ncor= a 0 0 0 0 0 25 26.8519 8.33333 5.55556 7.40741 1.85185 8.33333 0 0 0.925926 17.5926 7.40741 18.5185 0 c 0 0 0 0 0 29.6296 19.4444 66.6667 70.3704 91.6667 91.6667 0 98.1481 100 82.4074 60.1852 51.8519 32.4074 0 g 0 0 0 0 0 37.037 50.9259 9.25926 4.62963 0.925926 4.62963 74.0741 1.85185 0 0.925926 9.25926 18.5185 19.4444 0 t 0 0 0 0 0 8.33333 2.77778 15.7407 19.4444 0 1.85185 17.5926 0 0 15.7407 12.963 22.2222 29.6296 0

M00135_2.00_shift10 (M00135_2.00)
; positions_7nt_m3 versus M00135_2.00; m=73/154; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.540693; ----------mgmCCCCcw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 34.2572 8.19755 37.9693 0.923364 0.131831 14.6301 2.6438 18.9683 31.1332 c 0 0 0 0 0 0 0 0 0 0 26.9477 5.33258 58.3686 98.5209 99.8597 83.3526 79.2191 45.2756 21.9392 g 0 0 0 0 0 0 0 0 0 0 20.3666 63.0441 0.004593 0.00680749 0.00406137 0.0174761 2.14302 12.5883 20.6616 t 0 0 0 0 0 0 0 0 0 0 18.4285 23.4257 3.65749 0.548959 0 1.99986 15.9941 23.1679 26.266

M04645_2.00_shift6 (SP6,SP9)
; positions_7nt_m3 versus M04645_2.00 (SP6,SP9); m=74/154; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.540291; ------rcCmCGCCCmcy- ; cor=; Ncor= a 0 0 0 0 0 0 34.0131 14.7242 10.1294 65.7105 0.0806777 6.95222 0.8846 0 1.33288 41.9423 6.64311 17.1359 0 c 0 0 0 0 0 0 17.9445 63.7617 77.343 30.2145 98.8705 6.58979 98.5525 98.7908 83.7662 44.2998 65.8304 47.6132 0 g 0 0 0 0 0 0 38.8254 8.0385 3.56579 1.50134 0.68576 80.7578 0 0 0.820232 1.33709 6.74912 8.32313 0 t 0 0 0 0 0 0 9.21697 13.4755 8.96182 2.57373 0.36305 5.70016 0.562927 1.20919 14.0807 12.4208 20.7774 26.9278 0

M04530_2.00_shift2 (ZNF444)
; positions_7nt_m3 versus M04530_2.00 (ZNF444); m=75/154; ncol2=16; w=-6; offset=-6; strand=D; shift=2; score=0.539847; --ccrtCCCCCTCCCCCm- ; cor=; Ncor= a 0 0 14.2547 10.0366 35.0522 21.7179 0.373886 0.461095 0.373778 0 0.78853 0.358372 0.387041 0.13002 0.628661 0.311791 0.45977 29.0635 0 c 0 0 44.11 65.1368 5.80812 13.4159 99.0653 99.3228 99.1518 99.812 98.7814 0.874427 98.9392 99.7544 98.6998 95.7058 98.9943 42.1769 0 g 0 0 21.5485 11.3731 56.9684 0.675169 0.345125 0.0432277 0 0 0.157706 0.0286697 0.0716743 0.0866802 0.171453 0 0.445402 9.19091 0 t 0 0 20.0868 13.4535 2.17126 64.191 0.215703 0.172911 0.474411 0.18797 0.272401 98.7385 0.602064 0.0288934 0.500071 3.98243 0.100575 19.5687 0

M04529_2.00_shift2 (ZNF444)
; positions_7nt_m3 versus M04529_2.00 (ZNF444); m=76/154; ncol2=16; w=-6; offset=-6; strand=D; shift=2; score=0.539152; --ccGTCCCCCTCCCCCm- ; cor=; Ncor= a 0 0 18.4334 8.68599 21.0837 15.4828 0.210084 0.26866 0.175152 0.0233454 0.687886 0.418118 0.0700853 0.21028 0.0935126 0.287158 0.174948 26.0202 0 c 0 0 36.7144 67.4881 6.29233 11.9161 99.288 99.5211 99.5213 99.4631 99.1139 0.778165 99.5795 99.5794 99.6143 94.8771 99.4868 44.137 0 g 0 0 24.6717 10.7262 70.035 1.145 0.233427 0.093447 0 0.163418 0.0466364 0.139373 0 0.0350467 0.0935126 0.160809 0.0349895 7.24672 0 t 0 0 20.1806 13.0997 2.58903 71.4561 0.268441 0.116809 0.303596 0.350181 0.151568 98.6643 0.350426 0.175234 0.198714 4.67494 0.303242 22.5962 0

M04658_2.00_shift5 (KLF14)
; positions_7nt_m3 versus M04658_2.00 (KLF14); m=77/154; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.536377; -----crcCaCrCCCmcc- ; cor=; Ncor= a 0 0 0 0 0 18.6657 35.0563 17.8602 3.48319 54.8431 1.55897 35.8318 0 0.333264 0.287186 35.8439 11.1429 20.7362 0 c 0 0 0 0 0 38.9313 10.1459 62.6548 88.8259 20.6916 98.0821 0 99.6665 99.5938 80.7754 50.5193 62.5422 41.0331 0 g 0 0 0 0 0 19.7218 44.6686 8.18319 1.66264 16.1782 0 52.0917 0 0.0729015 0.0675733 2.51964 5.99601 13.7927 0 t 0 0 0 0 0 22.6812 10.1292 11.3018 6.02824 8.28698 0.358974 12.0765 0.333507 0 18.8698 11.1171 20.3189 24.4379 0

M00339_2.00_rc_shift9 (PAX6_rc)
; positions_7nt_m3 versus M00339_2.00_rc (PAX6_rc); m=78/154; ncol2=13; w=0; offset=1; strand=R; shift=9; score= 0.5339; ---------gmwCCgcCgt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 19.9528 26.8352 28.1956 4.7031 2.37697 9.4686 20.7834 10.0677 14.4899 18.0787 c 0 0 0 0 0 0 0 0 0 19.9528 37.8474 7.2146 85.8907 83.6291 21.0027 60.5757 69.8687 15.3081 16.603 g 0 0 0 0 0 0 0 0 0 40.1415 17.6587 16.391 4.7031 11.617 49.6149 9.44277 10.7374 65.1331 17.409 t 0 0 0 0 0 0 0 0 0 19.9528 17.6587 48.1988 4.7031 2.37697 19.9138 9.19812 9.3262 5.06887 47.9093

M08092_2.00_shift6 (SP2)
; positions_7nt_m3 versus M08092_2.00 (SP2); m=79/154; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score=0.533703; ------gyCCCGCCyCyyc ; cor=; Ncor= a 0 0 0 0 0 0 9.48992 2.31317 3.08422 0 0 10.3203 0 0 0 12.2183 6.82088 11.0913 13.4045 c 0 0 0 0 0 0 15.0059 48.102 82.2064 99.5848 97.4496 0 100 98.2206 65.7177 70.9371 57.5919 32.8588 42.5267 g 0 0 0 0 0 0 60.9727 15.2432 0.059312 0.415184 0 75.9193 0 0 0 0 5.87189 19.2764 23.7841 t 0 0 0 0 0 0 14.5314 34.3416 14.6501 0 2.55042 13.7604 0 1.77936 34.2823 16.8446 29.7153 36.7734 20.2847

M00375_2.00_shift11 (M00375_2.00)
; positions_7nt_m3 versus M00375_2.00; m=80/154; ncol2=9; w=0; offset=3; strand=D; shift=11; score=0.532023; -----------gCCcmCgc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 24.3908 13.6334 2.50247 7.7362 48.4453 2.10408 20.8312 15.2373 c 0 0 0 0 0 0 0 0 0 0 0 12.7331 74.6286 84.5445 67.0817 40.4649 91.2753 12.1393 46.7 g 0 0 0 0 0 0 0 0 0 0 0 41.026 2.7802 9.1823 3.72814 5.15741 0.424807 48.7377 13.9258 t 0 0 0 0 0 0 0 0 0 0 0 21.8501 8.95779 3.77076 21.454 5.93243 6.19585 18.2918 24.1369

M08880_2.00_shift5 (KLF9)
; positions_7nt_m3 versus M08880_2.00 (KLF9); m=81/154; ncol2=15; w=-3; offset=-3; strand=D; shift=5; score=0.531143; -----gGcCMCGCCCmCyy ; cor=; Ncor= a 0 0 0 0 0 14.4531 10.9375 16.0156 1.5625 71.875 0 23.0469 0 1.5625 0 32.0312 2.73438 9.76562 9.375 c 0 0 0 0 0 20.3125 3.125 67.1875 97.6562 26.1719 100 0.390625 99.2188 98.0469 98.4375 63.2812 80.0781 26.5625 46.0938 g 0 0 0 0 0 52.3438 84.375 11.7188 0.390625 1.5625 0 75.7812 0.78125 0.390625 0 0.390625 1.17188 13.6719 18.75 t 0 0 0 0 0 12.8906 1.5625 5.07812 0.390625 0.390625 0 0.78125 0 0 1.5625 4.29688 16.0156 50 25.7812

M08990_2.00_shift7 (M08990_2.00)
; positions_7nt_m3 versus M08990_2.00; m=82/154; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.531099; -------smCCwCCCm--- ; cor=; Ncor= a 0 0 0 0 0 0 0 6.59609 61.2378 0 11.7264 49.5114 0 2.9316 0 30.1303 0 0 0 c 0 0 0 0 0 0 0 27.443 26.7101 70.684 76.5472 17.5896 94.1368 94.1368 85.342 51.9544 0 0 0 g 0 0 0 0 0 0 0 44.3811 8.79479 23.4528 0 2.9316 5.86319 2.9316 5.86319 13.1922 0 0 0 t 0 0 0 0 0 0 0 21.5798 3.25733 5.86319 11.7264 29.9674 0 0 8.79479 4.72313 0 0 0

M08900_2.00_shift7 (ZIC1)
; positions_7nt_m3 versus M08900_2.00 (ZIC1); m=83/154; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.531099; -------smCCwCCCm--- ; cor=; Ncor= a 0 0 0 0 0 0 0 6.59609 61.2378 0 11.7264 49.5114 0 2.9316 0 30.1303 0 0 0 c 0 0 0 0 0 0 0 27.443 26.7101 70.684 76.5472 17.5896 94.1368 94.1368 85.342 51.9544 0 0 0 g 0 0 0 0 0 0 0 44.3811 8.79479 23.4528 0 2.9316 5.86319 2.9316 5.86319 13.1922 0 0 0 t 0 0 0 0 0 0 0 21.5798 3.25733 5.86319 11.7264 29.9674 0 0 8.79479 4.72313 0 0 0

M09505_2.00_shift9 (MAZ)
; positions_7nt_m3 versus M09505_2.00 (MAZ); m=84/154; ncol2=8; w=0; offset=1; strand=D; shift=9; score=0.530984; ---------CCCCcCCC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0.1 0.1 0.1 0.1 5.4 8.4 0.1 0.1 0 0 c 0 0 0 0 0 0 0 0 0 99.7 95.6 89.4 84.8 60.7 70.2 99.7 98.9 0 0 g 0 0 0 0 0 0 0 0 0 0.1 0.1 5.8 6.1 14.9 8.2 0.1 0.1 0 0 t 0 0 0 0 0 0 0 0 0 0.1 4.2 4.7 9 19 13.2 0.1 0.9 0 0

M07755_2.00_shift5 (ZNF616)
; positions_7nt_m3 versus M07755_2.00 (ZNF616); m=85/154; ncol2=15; w=-3; offset=-3; strand=D; shift=5; score=0.529921; -----yCrygCTCACCywy ; cor=; Ncor= a 0 0 0 0 0 8.97059 7.79412 47.2059 2.5 21.3235 0.147059 0.735294 0.147059 80.1471 0.147059 0.147059 3.67647 33.6765 4.85294 c 0 0 0 0 0 26.6176 73.0882 3.08824 59.5588 12.5 96.0294 0.147059 83.0882 0.147059 93.6765 85.4412 48.9706 18.9706 46.6176 g 0 0 0 0 0 8.38235 6.02941 44.8529 4.85294 62.5 0.147059 0.147059 0.147059 4.85294 1.91176 0.147059 5.44118 18.9706 13.6765 t 0 0 0 0 0 56.0294 13.0882 4.85294 33.0882 3.67647 3.67647 98.9706 16.6176 14.8529 4.26471 14.2647 41.9118 28.3824 34.8529

M07626_2.00_shift10 (ZNF282)
; positions_7nt_m3 versus M07626_2.00 (ZNF282); m=86/154; ncol2=6; w=0; offset=2; strand=D; shift=10; score=0.529418; ----------CTCCCs--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 0 0 0 c 0 0 0 0 0 0 0 0 0 0 99.7614 0.0795234 99.7614 99.7614 99.7614 56.9037 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 42.9372 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0.0795234 99.7614 0.0795234 0.0795234 0.0795234 0.0795234 0 0 0

M08323_2.00_shift4 (KLF15)
; positions_7nt_m3 versus M08323_2.00 (KLF15); m=87/154; ncol2=15; w=-4; offset=-4; strand=D; shift=4; score=0.52799; ----ccCcggCyCCgCCYC ; cor=; Ncor= a 0 0 0 0 5.4217 3.8153 6.4257 13.6546 16.2651 9.6386 2.6104 9.4378 8.2329 0 18.8755 0 0 0 10.6426 c 0 0 0 0 65.261 64.0562 70.8835 62.4498 23.0924 24.8996 85.3414 47.5904 88.755 100 0 99.1968 100 70.8835 69.0763 g 0 0 0 0 16.4659 17.8715 5.4217 8.8353 36.1446 46.1847 0 1.2048 3.012 0 58.8353 0.2008 0 0.8032 3.2129 t 0 0 0 0 12.8514 14.257 17.2691 15.0602 24.498 19.2771 12.0482 41.7671 0 0 22.2892 0.6024 0 28.3133 17.0683

M04657_2.00_shift5 (KLF14)
; positions_7nt_m3 versus M04657_2.00 (KLF14); m=88/154; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.51738; -----srcCaCGCCCmcy- ; cor=; Ncor= a 0 0 0 0 0 24.251 42.2284 16.4532 5.29267 65.2909 2.21104 18.4092 0.217797 0.265128 0.689655 35.1905 10.5908 19.8902 0 c 0 0 0 0 0 26.5725 11.9261 63.3006 87.1854 18.7423 97.2095 2.73727 99.1755 99.423 86.2069 52.5107 61.7582 39.8745 0 g 0 0 0 0 0 28.5961 38.409 8.59895 1.31291 11.4093 0.21348 71.5167 0.0777847 0.311915 0.351589 1.89847 6.2606 13.3804 0 t 0 0 0 0 0 20.5804 7.43645 11.6473 6.20897 4.55756 0.365965 7.33677 0.528936 0 12.7519 10.4003 21.3904 26.8549 0

M04559_2.00_shift5 (SP3,SP6)
; positions_7nt_m3 versus M04559_2.00 (SP3,SP6); m=89/154; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.516559; -----sgCCMCGCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 18.12 23.453 11.418 5.5243 73.9408 0 14.5351 0 0 0.185874 48.8032 4.24892 21.0642 0 c 0 0 0 0 0 30.96 6.35643 77.1332 85.2344 25.9592 100 0 99.4628 100 84.4711 42.5361 75.2961 41.0082 0 g 0 0 0 0 0 26.08 60.8498 3.00879 1.15942 0.019984 0 70.9581 0.0198965 0 0 0.511602 1.74845 7.9816 0 t 0 0 0 0 0 24.84 9.34075 8.44006 8.08184 0.0799361 0 14.5067 0.51731 0 15.343 8.1491 18.7065 29.946 0

M08967_2.00_shift4 (M08967_2.00)
; positions_7nt_m3 versus M08967_2.00; m=90/154; ncol2=19; w=-4; offset=-4; strand=D; shift=4; score=0.515494; ----cckCCCCkCCCCCwc ; cor=; Ncor= a 0 0 0 0 7.6 9 7.2 0.8 3.4 1.2 2.8 6 0.2 1.8 3.4 5.2 2.4 32.2 9 c 0 0 0 0 58.2 53.2 12.8 87 82.2 93.2 84.4 1.2 98 88.4 77.6 81.8 90.2 15.8 67.4 g 0 0 0 0 21 14.4 44.2 4.4 0.4 1.6 0.6 29.2 0.4 1.4 2.8 5.2 3 22 15.2 t 0 0 0 0 13.2 23.4 35.8 7.8 14 4 12.2 63.6 1.4 8.4 16.2 7.8 4.4 30 8.4

M08882_2.00_shift6 (EGR1)
; positions_7nt_m3 versus M08882_2.00 (EGR1); m=91/154; ncol2=17; w=-2; offset=-2; strand=D; shift=6; score=0.513482; ------yyyCCrCCCmCgC ; cor=; Ncor= a 0 0 0 0 0 0 11.8 15 12.8 17.2 6 30 1.4 2.2 1.4 55.4 4 21.2 5 c 0 0 0 0 0 0 43.6 45.6 40.6 69.6 84.2 0.4 93 95.8 89.2 41 87 4.6 80.8 g 0 0 0 0 0 0 18.2 8.2 12.8 2.2 1 47.6 3.2 0.4 0.2 0.4 3.4 50.6 3 t 0 0 0 0 0 0 26.4 31.2 33.8 11 8.8 22 2.4 1.6 9.2 3.2 5.6 23.6 11.2

M04540_2.00_shift5 (KLF13)
; positions_7nt_m3 versus M04540_2.00 (KLF13); m=92/154; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.512658; -----crCCACrCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 20.513 34.9546 17.3045 1.51246 75.5084 0 30.9757 0.0176134 0.364275 0.154971 35.7388 6.61041 18.839 0 c 0 0 0 0 0 34.234 4.11928 76.293 95.8513 18.075 99.9119 0 99.9031 99.5743 90.1534 55.83 73.1145 43.0158 0 g 0 0 0 0 0 22.3246 57.854 2.4346 1.62653 5.56794 0 65.2592 0.00440335 0.0351108 0.107288 0.799128 2.66336 10.2878 0 t 0 0 0 0 0 22.9284 3.07208 3.96799 1.00972 0.84867 0.0880747 3.76517 0.0748569 0.0263331 9.58436 7.63208 17.6118 27.8574 0

M04538_2.00_shift5 (KLF13)
; positions_7nt_m3 versus M04538_2.00 (KLF13); m=93/154; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.508449; -----crCCACRCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 19.2843 33.2076 18.5758 1.25656 80.2155 0 28.5787 0 0.126017 0.0174972 33.8885 5.28546 18.457 0 c 0 0 0 0 0 37.2752 4.84968 74.7925 96.574 13.6604 100 0 100 99.7862 91.4439 59.5032 76.796 44.2501 0 g 0 0 0 0 0 21.3509 58.8905 2.47009 1.45613 5.61149 0 69.5658 0 0.0305495 0.139978 0.45747 1.64547 9.06969 0 t 0 0 0 0 0 22.0896 3.0522 4.16166 0.713283 0.512647 0 1.85555 0 0.0572803 8.39866 6.15082 16.2731 28.2232 0

M02910_2.00_shift6 (SP3,SP6)
; positions_7nt_m3 versus M02910_2.00 (SP3,SP6); m=94/154; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.506602; ------sCCACrCCCmc-- ; cor=; Ncor= a 0 0 0 0 0 0 22.3999 17.6351 8.55439 71.6826 2.25957 26.1176 2.06696 2.5942 0.957055 43.3481 12.7548 0 0 c 0 0 0 0 0 0 30.0549 70.9806 83.8812 23.8364 93.3343 3.89076 96.2009 95.7826 81.092 45.3752 55.8995 0 0 g 0 0 0 0 0 0 35.5782 4.23155 3.17299 2.67418 1.2004 55.5378 0.55313 0.768116 1.5092 2.34931 9.05016 0 0 t 0 0 0 0 0 0 11.9671 7.15283 4.39142 1.80688 3.20576 14.4538 1.17904 0.855072 16.4417 8.92737 22.2955 0 0

M04537_2.00_shift5 (KLF13)
; positions_7nt_m3 versus M04537_2.00 (KLF13); m=95/154; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score= 0.5051; -----crCCACRCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 23.8837 39.5377 16.4845 4.1606 76.1744 0.202505 25.201 0.217115 0.321351 0.192691 39.3057 7.57222 19.0559 0 c 0 0 0 0 0 31.1724 11.4831 71.5224 92.0949 21.3192 99.61 0.889699 99.431 99.2527 91.3977 51.1096 70.0514 40.3629 0 g 0 0 0 0 0 24.2527 43.8909 6.20389 0.811317 1.99025 0 71.1813 0.164708 0.246618 0.144519 0.680735 3.81613 13.0402 0 t 0 0 0 0 0 20.6912 5.08826 5.78922 2.93322 0.516203 0.187505 2.72805 0.187168 0.179359 8.26509 8.90402 18.5603 27.541 0

M04468_2.00_shift9 (ZNF740)
; positions_7nt_m3 versus M04468_2.00 (ZNF740); m=96/154; ncol2=13; w=0; offset=1; strand=D; shift=9; score=0.503344; ---------cygCCCCCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 10.4898 3.7037 13.6842 3.32393 0.10327 0.892538 0.757303 2.56321 1.37761 2.66999 c 0 0 0 0 0 0 0 0 0 61.1477 45.0794 12.2978 85.5127 93.8726 96.9654 98.7018 92.345 96.609 97.33 g 0 0 0 0 0 0 0 0 0 11.0015 3.59788 58.6906 10.5989 1.13597 1.21385 0.036062 0.311742 0 0 t 0 0 0 0 0 0 0 0 0 17.3611 47.619 15.3273 0.56444 4.88812 0.92824 0.504868 4.78005 2.01342 0

M08884_2.00_shift7 (EGR2)
; positions_7nt_m3 versus M08884_2.00 (EGR2); m=97/154; ncol2=18; w=-1; offset=-1; strand=D; shift=7; score=0.500684; -------yyCCdCCCmCwC ; cor=; Ncor= a 0 0 0 0 0 0 0 13.6 8.2 10.8 6.2 34.6 2 6 1.8 48.6 1.4 39.6 5.6 c 0 0 0 0 0 0 0 56.2 50.2 78.2 87.4 2.2 91.6 89 79.4 46.2 93 4.4 76.6 g 0 0 0 0 0 0 0 4.8 7.4 3.4 0.6 28.2 4 1.4 0.6 1.2 2.2 19 10.2 t 0 0 0 0 0 0 0 25.4 34.2 7.6 5.8 35 2.4 3.6 18.2 4 3.4 37 7.6

M04386_2.00_shift6 (ZNF263)
; positions_7nt_m3 versus M04386_2.00 (ZNF263); m=98/154; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.498041; ------vGTsCTCCCy--- ; cor=; Ncor= a 0 0 0 0 0 0 29.7705 4.34783 0 3.37328 3.93013 2.36613 0 0.455433 10.6842 14.6885 0 0 0 c 0 0 0 0 0 0 36.7869 7.37986 2.98982 27.2526 95.1341 2.67746 96.764 99.2193 80.2632 32.6557 0 0 0 g 0 0 0 0 0 0 25.9016 87.2426 0 67.6875 0 0 0 0.325309 2.78947 20.9836 0 0 0 t 0 0 0 0 0 0 7.54098 1.02975 97.0102 1.68664 0.935745 94.9564 3.23604 0 6.26316 31.6721 0 0 0

M04387_2.00_shift6 (ZNF263)
; positions_7nt_m3 versus M04387_2.00 (ZNF263); m=99/154; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.495608; ------sGTsCTCCCy--- ; cor=; Ncor= a 0 0 0 0 0 0 21.9248 3.01455 0 2.60736 2.69984 1.6333 0.662617 4.82615 17.0004 20.5464 0 0 0 c 0 0 0 0 0 0 45.1025 3.69023 5.79088 28.9494 93.0122 5.79557 97.0182 91.178 71.8022 34.5475 0 0 0 g 0 0 0 0 0 0 25.8542 91.3202 0 67.3696 2.17046 0 2.31916 2.02387 2.86065 13.0336 0 0 0 t 0 0 0 0 0 0 7.11845 1.97505 94.2091 1.07362 2.11752 92.5711 0 1.97198 8.33674 31.8725 0 0 0

M08287_2.00_shift7 (PATZ1)
; positions_7nt_m3 versus M08287_2.00 (PATZ1); m=100/154; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score=0.493575; -------CCCCkCCC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 7.7333 0 0 22.1333 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 94.1333 81.0667 100 100 0 100 100 84 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 35.2 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 5.8667 11.2 0 0 42.6667 0 0 16 0 0 0 0

M08342_2.00_shift3 (ZNF596)
; positions_7nt_m3 versus M08342_2.00 (ZNF596); m=101/154; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.492132; ---kCTCkSbCTCyyycy- ; cor=; Ncor= a 0 0 0 0.123152 0.123152 0.123152 0.123152 9.97496 0.123152 7.51224 0.123152 0.123152 0.123152 14.4087 2.58681 3.5714 5.54229 7.01949 0 c 0 0 0 4.55661 99.6305 8.99069 98.6453 3.07879 28.2023 32.6358 99.6305 0.615758 99.6305 47.4143 50.8622 28.2022 67.61 27.7096 0 g 0 0 0 62.6845 0.123152 2.09342 1.10836 42.4885 69.0883 29.68 0.123152 0.123152 0.123152 4.064 14.9013 20.8132 11.4537 17.8576 0 t 0 0 0 32.6358 0.123152 88.7927 0.123152 44.4577 2.58618 30.172 0.123152 99.1379 0.123152 34.113 31.6496 47.4132 15.3939 47.4133 0

M08968_2.00_shift1 (M08968_2.00)
; positions_7nt_m3 versus M08968_2.00; m=102/154; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.491861; -CycCycCyCCTCCYyCbC ; cor=; Ncor= a 0 2.6 5 3.8 6 9.2 5.6 1.2 3.8 4.4 1 2.2 0 1.2 0.8 6.2 1.4 14.6 3.8 c 0 68 47.2 67.4 75.2 38.8 51.6 71.4 38.6 90.8 97 0.4 97.2 95.6 71.4 59.6 80.4 27.6 76.2 g 0 8 10.8 9.4 6.8 21.4 18.6 3.6 10 1.2 0.8 14.8 1.6 2.6 2.6 5.2 8.4 30.4 11.2 t 0 21.4 37 19.4 12 30.6 24.2 23.8 47.6 3.6 1.2 82.6 1.2 0.6 25.2 29 9.8 27.4 8.8

M08937_2.00_shift1 (WT1)
; positions_7nt_m3 versus M08937_2.00 (WT1); m=103/154; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.491861; -CycCycCyCCTCCYyCbC ; cor=; Ncor= a 0 2.6 5 3.8 6 9.2 5.6 1.2 3.8 4.4 1 2.2 0 1.2 0.8 6.2 1.4 14.6 3.8 c 0 68 47.2 67.4 75.2 38.8 51.6 71.4 38.6 90.8 97 0.4 97.2 95.6 71.4 59.6 80.4 27.6 76.2 g 0 8 10.8 9.4 6.8 21.4 18.6 3.6 10 1.2 0.8 14.8 1.6 2.6 2.6 5.2 8.4 30.4 11.2 t 0 21.4 37 19.4 12 30.6 24.2 23.8 47.6 3.6 1.2 82.6 1.2 0.6 25.2 29 9.8 27.4 8.8

M08086_2.00_shift6 (KLF5)
; positions_7nt_m3 versus M08086_2.00 (KLF5); m=104/154; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.490279; ------gCCMCrCCCh--- ; cor=; Ncor= a 0 0 0 0 0 0 10.4989 0 0 25.5455 0 37.1097 0 0 0 28.7635 0 0 0 c 0 0 0 0 0 0 14.863 87.4293 88.2228 70.3034 100 0 100 100 96.5028 41.1065 0 0 0 g 0 0 0 0 0 0 55.6315 0 0 0 0 38.0721 0 0 0 0 0 0 0 t 0 0 0 0 0 0 19.0067 12.5707 11.7772 4.15105 0 24.8182 0 0 3.49717 30.13 0 0 0

M00231_2.00_shift12 (EGR2)
; positions_7nt_m3 versus M00231_2.00 (EGR2); m=105/154; ncol2=8; w=0; offset=4; strand=D; shift=12; score=0.485953; ------------mCCmCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 36.8338 0.0120424 0.0120424 43.3646 0.0120424 10.9824 0.013151 c 0 0 0 0 0 0 0 0 0 0 0 0 56.1185 99.9639 99.9639 56.6113 98.7596 2.45002 93.3851 g 0 0 0 0 0 0 0 0 0 0 0 0 1.77069 0.0120424 0.0120424 0.0120424 1.21628 84.1175 0.013151 t 0 0 0 0 0 0 0 0 0 0 0 0 5.277 0.0120424 0.0120424 0.0120424 0.0120424 2.45002 6.58864

M06117_2.00_shift6 (SP6)
; positions_7nt_m3 versus M06117_2.00 (SP6); m=106/154; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.485857; ------gmymCGCCCmc-- ; cor=; Ncor= a 0 0 0 0 0 0 18.1818 27.2727 0 54.5455 0 4.54545 4.54545 0 0 54.5455 4.54545 0 0 c 0 0 0 0 0 0 4.54545 45.4545 59.0909 45.4545 100 0 95.4545 100 86.3636 31.8182 63.6364 0 0 g 0 0 0 0 0 0 59.0909 9.09091 0 0 0 86.3636 0 0 0 0 13.6364 0 0 t 0 0 0 0 0 0 18.1818 18.1818 40.9091 0 0 9.09091 0 0 13.6364 13.6364 18.1818 0 0

M08878_2.00_shift4 (ZBTB17)
; positions_7nt_m3 versus M08878_2.00 (ZBTB17); m=107/154; ncol2=19; w=-4; offset=-4; strand=D; shift=4; score=0.485622; ----yykYCCcTCCCCCwc ; cor=; Ncor= a 0 0 0 0 12 18.6 6 2.6 2 4.6 23.2 10.2 0.4 5.2 4.4 9 0.8 45.8 9.2 c 0 0 0 0 50.8 33.2 13.6 71 72.6 88.6 53.8 0.2 85 79 68.4 68 81.2 9.4 57.2 g 0 0 0 0 11.4 6.2 27.6 0.8 2.2 1.6 3.2 20 7.4 0.6 3.4 2.6 4 12.8 13.6 t 0 0 0 0 25.8 42 52.8 25.6 23.2 5.2 19.8 69.6 7.2 15.2 23.8 20.4 14 32 20

M08296_2.00_shift3 (SP4)
; positions_7nt_m3 versus M08296_2.00 (SP4); m=108/154; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.485001; ---yhgGCyCCgCCYCcy- ; cor=; Ncor= a 0 0 0 15.7895 32.5911 24.2915 11.5385 1.8219 5.2632 12.1457 0 12.5506 0.2024 0 0 21.8623 12.1457 15.7895 0 c 0 0 0 42.5101 26.5182 18.8259 11.1336 75.9109 56.2753 83.4008 98.583 0 99.7976 99.7976 68.6235 70.2429 63.9676 45.3441 0 g 0 0 0 12.9555 14.9798 48.583 69.8381 7.085 3.4413 2.6316 1.417 67.6113 0 0 1.0121 0 4.8583 5.8704 0 t 0 0 0 28.7449 25.9109 8.2996 7.4899 15.1822 35.0202 1.8219 0 19.8381 0 0.2024 30.3644 7.8947 19.0283 32.996 0

M08326_2.00_shift7 (SP2)
; positions_7nt_m3 versus M08326_2.00 (SP2); m=109/154; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.483682; -------cCCCGCCCc--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.083612 6.77258 2.42475 0.083612 6.43813 0.083612 0.083612 0.083612 22.4916 0 0 0 c 0 0 0 0 0 0 0 63.6288 74.3311 97.408 99.7492 0.083612 99.7492 99.7492 99.7492 64.9666 0 0 0 g 0 0 0 0 0 0 0 14.7993 0.083612 0.083612 0.083612 93.3946 0.083612 0.083612 0.083612 1.08696 0 0 0 t 0 0 0 0 0 0 0 21.4883 18.8127 0.083612 0.083612 0.083612 0.083612 0.083612 0.083612 11.4548 0 0 0

M01864_2.00_shift12 (M01864_2.00)
; positions_7nt_m3 versus M01864_2.00; m=110/154; ncol2=9; w=0; offset=4; strand=D; shift=12; score=0.482923; ------------CCCmCGc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 16.0527 1.55222 2.3878 48.8627 1.22013 16.7571 8.3944 c 0 0 0 0 0 0 0 0 0 0 0 0 73.3965 93.6616 88.2675 47.8952 96.4432 2.79778 59.0016 g 0 0 0 0 0 0 0 0 0 0 0 0 4.64539 4.13583 1.01043 1.76653 0.65636 68.6365 10.4601 t 0 0 0 0 0 0 0 0 0 0 0 0 5.90545 0.650307 8.33424 1.47553 1.68027 11.8086 22.144

M02932_2.00_shift7 (M02932_2.00)
; positions_7nt_m3 versus M02932_2.00; m=111/154; ncol2=16; w=-1; offset=-1; strand=D; shift=7; score=0.481697; -------mhmCGCCCmCkC ; cor=; Ncor= a 0 0 0 0 0 0 0 32.3142 32.2785 61.8182 0 7.54445 0 0.157812 0 51.7114 0.314961 0.422833 0.157978 c 0 0 0 0 0 0 0 32.4196 30.9072 36.6753 99.6845 0.432484 99.9473 99.737 100 48.1306 99.5276 16.7321 99.842 g 0 0 0 0 0 0 0 11.3337 3.69198 0.363636 0.0525762 91.11 0.0527148 0.105208 0 0.157978 0 25.5814 0 t 0 0 0 0 0 0 0 23.9325 33.1224 1.14286 0.262881 0.913023 0 0 0 0 0.15748 57.2637 0

M00766_2.00_shift7 (M00766_2.00)
; positions_7nt_m3 versus M00766_2.00; m=112/154; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score=0.480393; -------GTsCTCCc---- ; cor=; Ncor= a 0 0 0 0 0 0 0 4.54545 3.57143 3.57143 21.4286 3.57143 3.57143 11.5385 10 0 0 0 0 c 0 0 0 0 0 0 0 9.09091 3.57143 39.2857 71.4286 3.57143 89.2857 80.7692 60 0 0 0 0 g 0 0 0 0 0 0 0 81.8182 3.57143 53.5714 3.57143 3.57143 3.57143 3.84615 15 0 0 0 0 t 0 0 0 0 0 0 0 4.54545 89.2857 3.57143 3.57143 89.2857 3.57143 3.84615 15 0 0 0 0

M02663_2.00_shift11 (MZF1)
; positions_7nt_m3 versus M02663_2.00 (MZF1); m=113/154; ncol2=6; w=0; offset=3; strand=D; shift=11; score=0.480242; -----------TCCCCr-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 5 40 0 0 c 0 0 0 0 0 0 0 0 0 0 0 10 100 95 90 95 20 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 t 0 0 0 0 0 0 0 0 0 0 0 90 0 0 10 0 15 0 0

M07669_2.00_rc_shift7 (ZNF730_rc)
; positions_7nt_m3 versus M07669_2.00_rc (ZNF730_rc); m=114/154; ncol2=9; w=-1; offset=-1; strand=R; shift=7; score=0.476451; -------TrGCtkCCC--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.247525 56.6832 0.247525 0.247525 21.0396 0.247525 0.247525 0.247525 10.1485 0 0 0 c 0 0 0 0 0 0 0 0.247525 0.247525 15.099 99.2574 14.1089 13.1188 99.2574 99.2574 75.495 0 0 0 g 0 0 0 0 0 0 0 0.247525 35.8911 69.5545 0.247525 6.18812 35.8911 0.247525 0.247525 0.247525 0 0 0 t 0 0 0 0 0 0 0 99.2574 7.17822 15.099 0.247525 58.6634 50.7426 0.247525 0.247525 14.1089 0 0 0

M05846_2.00_shift2 (CTCF)
; positions_7nt_m3 versus M05846_2.00 (CTCF); m=115/154; ncol2=17; w=-6; offset=-6; strand=D; shift=2; score=0.475676; --cscwmyasCgCCcCCtw ; cor=; Ncor= a 0 0 15.4 14.5 17.5 31.6 39.5 11.8 46.5 16.2 2.5 8.1 5.4 1.8 12.4 4.3 8.8 17.9 37.2 c 0 0 44.8 40.6 42.1 20.3 36.3 33.9 18.1 25.1 77.1 13.4 80.3 92.7 66.5 80.3 77.9 15.4 10.6 g 0 0 15.9 26.4 21.5 20.4 9.9 19.6 17.9 50.7 5.3 64.3 10.9 4 15.4 1.9 7 4 21 t 0 0 23.9 18.4 18.9 27.6 14.3 34.8 17.5 8 15.1 14.3 3.4 1.5 5.7 13.6 6.3 62.8 31.2

M01172_2.00_shift11 (VEZF1)
; positions_7nt_m3 versus M01172_2.00 (VEZF1); m=116/154; ncol2=10; w=0; offset=3; strand=D; shift=11; score= 0.4742; -----------CCCCCCmy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 7.173 0.17421 0.427526 0.21282 0.666427 1.00267 40.685 4.47697 c 0 0 0 0 0 0 0 0 0 0 0 79.0692 99.7338 99.5102 99.7526 98.9066 97.7743 35.7253 55.0887 g 0 0 0 0 0 0 0 0 0 0 0 13.7402 0.0839533 0.0167436 0.0014197 0.00207909 0.333758 11.088 7.02128 t 0 0 0 0 0 0 0 0 0 0 0 0.0176032 0 0.0455138 0.0331303 0.424933 0.889284 12.5016 33.413

M07754_2.00_shift10 (ZNF468)
; positions_7nt_m3 versus M07754_2.00 (ZNF468); m=117/154; ncol2=12; w=0; offset=2; strand=D; shift=10; score=0.473193; ----------CrCCCCCTC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 16.3043 42.6812 0.942029 0.0724638 0.0724638 0.0724638 0.0724638 2.97101 0.0724638 c 0 0 0 0 0 0 0 0 0 0 77.7536 0.942029 84.7101 98.913 88.4783 99.7826 99.4928 0.0724638 99.7826 g 0 0 0 0 0 0 0 0 0 0 2.10145 46.1594 9.92754 0.362319 0.0724638 0.0724638 0.0724638 0.652174 0.0724638 t 0 0 0 0 0 0 0 0 0 0 3.84058 10.2174 4.42029 0.652174 11.3768 0.0724638 0.362319 96.3043 0.0724638

M07652_2.00_shift4 (ZNF543)
; positions_7nt_m3 versus M07652_2.00 (ZNF543); m=118/154; ncol2=12; w=-4; offset=-4; strand=D; shift=4; score=0.468282; ----sGsCCCCKCCcs--- ; cor=; Ncor= a 0 0 0 0 3.72984 0.100806 0.504032 0.100806 0.100806 0.100806 0.100806 0.100806 0.100806 11.3911 14.2137 6.55242 0 0 0 c 0 0 0 0 31.9556 0.100806 50.1008 96.875 70.2621 87.6008 99.6976 0.504032 98.8911 88.4073 51.3105 50.9073 0 0 0 g 0 0 0 0 64.2137 88.4073 30.746 0.100806 9.375 8.97177 0.100806 25.9073 0.504032 0.100806 20.6653 29.1331 0 0 0 t 0 0 0 0 0.100806 11.3911 18.6492 2.92339 20.2621 3.32661 0.100806 73.4879 0.504032 0.100806 13.8105 13.4073 0 0 0

M00617_2.00_shift7 (M00617_2.00)
; positions_7nt_m3 versus M00617_2.00; m=119/154; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.466688; -------ccmCGCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 0 23.489 19.4417 52.2892 0.827505 19.3067 3.00723e-10 0.283087 0.101233 35.4676 0 0 0 c 0 0 0 0 0 0 0 38.3414 47.819 36.118 98.5594 3.09116e-07 99.9999 99.2854 80.6139 23.3039 0 0 0 g 0 0 0 0 0 0 0 14.6807 9.46331 5.97026 6.91425e-05 72.9993 3.40174e-19 0.430847 0.375188 8.48772 0 0 0 t 0 0 0 0 0 0 0 23.489 23.276 5.62258 0.61303 7.69407 0 0 18.9096 32.7408 0 0 0

M08261_2.00_shift9 (ZSCAN22)
; positions_7nt_m3 versus M08261_2.00 (ZSCAN22); m=120/154; ncol2=15; w=0; offset=1; strand=D; shift=9; score=0.463463; ---------CCTCCtCCmT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 4.6 1.4 4.2 3.2 0.6 10.2 1.4 0.4 37.8 2 c 0 0 0 0 0 0 0 0 0 83.4 91 4.6 94 79.8 11.8 97.4 93.4 47.6 4.2 g 0 0 0 0 0 0 0 0 0 4 1.6 13.4 1.4 0.4 24.2 0.2 1.2 9 0.2 t 0 0 0 0 0 0 0 0 0 8 6 77.8 1.4 19.2 53.8 1 5 5.6 93.6

M04457_2.00_shift6 (KLF16)
; positions_7nt_m3 versus M04457_2.00 (KLF16); m=121/154; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.462233; ------rcCmCgCCCm--- ; cor=; Ncor= a 0 0 0 0 0 0 32.0237 21.6005 9.64297 56.0179 0 23.6651 2.08927 5.70598 7.5165 27.5834 0 0 0 c 0 0 0 0 0 0 22.5292 57.0911 77.8929 27.5676 97.7205 13.1345 92.8205 88.8061 78.6577 52.9773 0 0 0 g 0 0 0 0 0 0 35.8502 11.3551 4.04845 9.23888 0 56.8721 1.82336 3.18008 3.21906 3.76509 0 0 0 t 0 0 0 0 0 0 9.59689 9.95327 8.41568 7.17561 2.27954 6.32828 3.26686 2.30783 10.6068 15.6742 0 0 0

M08290_2.00_shift6 (MAZ)
; positions_7nt_m3 versus M08290_2.00 (MAZ); m=122/154; ncol2=9; w=-2; offset=-2; strand=D; shift=6; score=0.461201; ------sCCCCkCCC---- ; cor=; Ncor= a 0 0 0 0 0 0 2.21823 0.059952 0.059952 0.059952 0.059952 8.93285 0.059952 0.059952 0.059952 0 0 0 0 c 0 0 0 0 0 0 52.8177 92.1463 99.8201 99.8201 99.8201 0.059952 99.8201 99.8201 88.789 0 0 0 0 g 0 0 0 0 0 0 37.7098 0.059952 0.059952 0.059952 0.059952 35.3118 0.059952 0.059952 0.059952 0 0 0 0 t 0 0 0 0 0 0 7.2542 7.73381 0.059952 0.059952 0.059952 55.6954 0.059952 0.059952 11.0911 0 0 0 0

M07727_2.00_shift4 (ZNF460)
; positions_7nt_m3 versus M07727_2.00 (ZNF460); m=123/154; ncol2=12; w=-4; offset=-4; strand=D; shift=4; score=0.461095; ----cgCCrCCkCCCC--- ; cor=; Ncor= a 0 0 0 0 15.7 0.1 0.1 4.1 26.5 0.1 0.1 10.5 0.1 0.1 3.7 3.7 0 0 0 c 0 0 0 0 66.9 23.3 85.3 95.7 9.7 99.7 99.7 0.1 99.7 77.7 77.3 68.1 0 0 0 g 0 0 0 0 17.3 66.1 14.5 0.1 50.1 0.1 0.1 28.5 0.1 22.1 4.5 18.9 0 0 0 t 0 0 0 0 0.1 10.5 0.1 0.1 13.7 0.1 0.1 60.9 0.1 0.1 14.5 9.3 0 0 0

M08445_2.00_shift10 (INSM1)
; positions_7nt_m3 versus M08445_2.00 (INSM1); m=124/154; ncol2=12; w=0; offset=2; strand=D; shift=10; score=0.454236; ----------ygcCCCCwk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 8.33333 20.8333 25 0 0 0 0 33.3333 12.5 c 0 0 0 0 0 0 0 0 0 0 50 0 66.6667 100 100 95.8333 100 0 0 g 0 0 0 0 0 0 0 0 0 0 0 66.6667 8.33333 0 0 4.16667 0 0 62.5 t 0 0 0 0 0 0 0 0 0 0 41.6667 12.5 0 0 0 0 0 66.6667 25

M07751_2.00_shift3 (ZNF534)
; positions_7nt_m3 versus M07751_2.00 (ZNF534); m=125/154; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.452362; ---vggyTCTykCCCCcc- ; cor=; Ncor= a 0 0 0 32.329 11.1564 24.8371 6.92182 1.7101 0.0814332 0.0814332 0.0814332 0.407166 0.407166 0.0814332 0.0814332 15.0651 8.87622 6.92182 0 c 0 0 0 26.1401 17.0195 17.0195 30.7003 1.05863 99.7557 14.4137 64.5765 0.0814332 99.1042 87.3779 99.43 69.4625 49.5928 61.645 0 g 0 0 0 32.329 60.342 54.4788 12.4593 8.22476 0.0814332 0.0814332 0.0814332 53.5016 0.0814332 0.0814332 0.0814332 7.24756 17.9967 12.1336 0 t 0 0 0 9.20195 11.4821 3.6645 49.9186 89.0065 0.0814332 85.4235 35.2606 46.0098 0.407166 12.4593 0.407166 8.22476 23.5342 19.2997 0

M06159_2.00_shift3 (M06159_2.00)
; positions_7nt_m3 versus M06159_2.00; m=126/154; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.452071; ---ktgRCCmCGCCCmyh- ; cor=; Ncor= a 0 0 0 4.16667 25 20.8333 25 0 0 41.6667 0 4.16667 0 0 0 33.3333 4.34783 26.087 0 c 0 0 0 4.16667 12.5 8.33333 0 87.5 83.3333 58.3333 100 4.16667 100 100 95.8333 58.3333 47.8261 26.087 0 g 0 0 0 29.1667 8.33333 54.1667 75 0 4.16667 0 0 83.3333 0 0 0 4.16667 17.3913 8.69565 0 t 0 0 0 62.5 54.1667 16.6667 0 12.5 12.5 0 0 8.33333 0 0 4.16667 4.16667 30.4348 39.1304 0

M00779_2.00_shift6 (M00779_2.00)
; positions_7nt_m3 versus M00779_2.00; m=127/154; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.450425; ------rccmCrCCYh--- ; cor=; Ncor= a 0 0 0 0 0 0 27.1429 23.9158 19.9845 44.052 6.52389 36.7441 3.85933 3.10594 4.58462 32.2624 0 0 0 c 0 0 0 0 0 0 17.8341 41.8687 46.7566 34.3077 84.3918 0.00329278 94.6792 96.8649 70.2954 25.126 0 0 0 g 0 0 0 0 0 0 36.2745 15.4026 12.8707 12.0056 0.00980827 49.5994 0.013043 0.0134782 0.0240579 15.3929 0 0 0 t 0 0 0 0 0 0 18.7485 18.8128 20.3882 9.6347 9.07452 13.6533 1.44845 0.0156594 25.0959 27.2187 0 0 0

M00134_2.00_shift6 (M00134_2.00)
; positions_7nt_m3 versus M00134_2.00; m=128/154; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.444843; ------gccmCgCCCh--- ; cor=; Ncor= a 0 0 0 0 0 0 23.4441 21.9242 17.7318 51.5538 0.989471 22.8736 0.00886864 0.0191497 0.112067 34.2124 0 0 0 c 0 0 0 0 0 0 18.0766 49.7789 53.8047 35.2557 97.4574 1.03044 99.9596 99.9363 82.3801 25.8571 0 0 0 g 0 0 0 0 0 0 41.4554 11.5605 7.65501 8.95871 0.0320459 66.0217 0.0241075 0.0173274 0.0228534 7.71053 0 0 0 t 0 0 0 0 0 0 17.0239 16.7365 20.8085 4.2318 1.52107 10.0743 0 0.0271748 17.485 32.22 0 0 0

M11228_2.00_rc_shift6 (NFKB1_rc)
; positions_7nt_m3 versus M11228_2.00_rc (NFKB1_rc); m=129/154; ncol2=10; w=-2; offset=-2; strand=R; shift=6; score=0.443548; ------GGGrATCCCC--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11.1111 55.5556 83.3333 5.55556 0 0 0 0 0 0 0 c 0 0 0 0 0 0 5.55556 0 0 5.55556 16.6667 0 88.8889 100 100 100 0 0 0 g 0 0 0 0 0 0 94.4444 100 88.8889 38.8889 0 5.55556 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 88.8889 11.1111 0 0 0 0 0 0

M08361_2.00_shift6 (ZSCAN22)
; positions_7nt_m3 versus M08361_2.00 (ZSCAN22); m=130/154; ncol2=18; w=-2; offset=-2; strand=D; shift=6; score=0.441568; ------cyGCCTCCkCCmT ; cor=; Ncor= a 0 0 0 0 0 0 10.4947 19.5856 7.01872 2.20588 1.40374 2.20588 0.0668449 0.0668449 7.82086 0.0668449 0.601604 38.3021 3.54278 c 0 0 0 0 0 0 47.1257 30.8155 6.21658 85.8957 93.6497 3.81016 99.2647 87.7674 13.4358 97.1257 90.1738 41.2433 2.20588 g 0 0 0 0 0 0 24.3984 24.3984 76.5374 2.74064 0.601604 21.7246 0.601604 0.601604 40.9759 0.0668449 2.20588 16.1096 0.0668449 t 0 0 0 0 0 0 17.9813 25.2005 10.2273 9.15775 4.34492 72.2594 0.0668449 11.5642 37.7674 2.74064 7.01872 4.34492 94.1845

M04606_2.00_shift3 (SP1)
; positions_7nt_m3 versus M04606_2.00 (SP1); m=131/154; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.441126; ---twrGCCmCGCCCmCw- ; cor=; Ncor= a 0 0 0 16.9909 56.8037 51.2491 18.8739 5.40541 0.947551 64.5165 0.218648 12.3046 0 0 0 52.4992 4.05832 28.9973 0 c 0 0 0 22.2937 5.17881 2.43829 1.62252 91.9364 84.7191 33.994 99.4534 1.27804 100 100 93.8199 43.1881 71.4114 22.203 0 g 0 0 0 16.7869 2.76005 42.8571 77.9504 1.0395 0.987588 1.06907 0 80.2991 0 0 0.120882 0.563852 2.16444 6.4177 0 t 0 0 0 43.9285 35.2575 3.4555 1.55318 1.61865 13.3458 0.42042 0.327971 6.11829 0 0 6.05923 3.74886 22.3658 42.3819 0

M06160_2.00_shift3 (M06160_2.00)
; positions_7nt_m3 versus M06160_2.00; m=132/154; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.440258; ---kwrGCCmCGCCCmcy- ; cor=; Ncor= a 0 0 0 11.04 33.6 27.8219 17.3291 6.51828 4.45151 39.4277 0.63593 3.6566 0.794913 0.63593 1.27186 43.0843 7.3955 22.8525 0 c 0 0 0 19.04 8.96 11.2878 0.953895 81.2401 72.496 60.5723 99.2051 0 99.2051 99.3641 81.876 42.1304 62.701 27.2285 0 g 0 0 0 25.12 14.4 42.4483 74.2448 5.40541 1.27186 0 0 90.461 0 0 0 1.43084 7.55627 13.128 0 t 0 0 0 44.8 43.04 18.442 7.47218 6.83625 21.7806 0 0.158983 5.88235 0 0 16.8521 13.3545 22.3473 36.7909 0

M07844_2.00_shift3 (ZNF263)
; positions_7nt_m3 versus M07844_2.00 (ZNF263); m=133/154; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.440126; ---ccycyycsTCCTCCC- ; cor=; Ncor= a 0 0 0 12.5843 8.5393 12.1348 8.98879 15.0562 4.0449 19.5506 3.5955 1.3483 0.2247 2.2472 0 0 1.7978 6.9663 0 c 0 0 0 57.3034 58.2022 32.3596 64.4943 29.4382 45.618 59.5505 55.2809 6.2921 78.6517 97.3034 0 95.5056 95.5055 69.6629 0 g 0 0 0 13.2584 12.5843 10.3371 17.0787 17.5281 19.3258 12.3596 31.236 0 19.3258 0 0 0.6742 0.674199 1.7978 0 t 0 0 0 16.8539 20.6742 45.1685 9.43819 37.9775 31.0112 8.53929 9.8876 92.3596 1.7978 0.4494 100 3.8202 2.0225 21.573 0

M08920_2.00_shift1 (SP3,SP6)
; positions_7nt_m3 versus M08920_2.00 (SP3,SP6); m=134/154; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.438025; -cscysgCCCCgCCCccyc ; cor=; Ncor= a 0 12.6205 11.5512 11.6114 15.9639 20.5271 9.27711 3.70482 5.63253 10.6325 3.10241 8.73494 0.451807 0.993976 0.421687 16.5964 7.37952 11.5211 11.2952 c 0 44.9849 45.5572 51.5813 44.9849 31.5512 23.9157 73.4639 71.9277 87.1687 89.0211 5.06024 96.6265 97.741 85.4819 63.8253 55.4669 38.9307 43.9006 g 0 24.1867 26.506 16.747 13.2982 36.7169 55.3916 13.3133 3.49398 1.4759 3.43373 62.756 1.95783 1.0241 0.240964 7.5 19.9699 21.9277 22.003 t 0 18.2078 16.3855 20.0602 25.753 11.2048 11.4157 9.51807 18.9458 0.722892 4.44277 23.4488 0.963855 0.240964 13.8554 12.0783 17.1837 27.6205 22.8012

M08978_2.00_shift1 (M08978_2.00)
; positions_7nt_m3 versus M08978_2.00; m=135/154; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.438025; -cscysgCCCCgCCCccyc ; cor=; Ncor= a 0 12.6205 11.5512 11.6114 15.9639 20.5271 9.27711 3.70482 5.63253 10.6325 3.10241 8.73494 0.451807 0.993976 0.421687 16.5964 7.37952 11.5211 11.2952 c 0 44.9849 45.5572 51.5813 44.9849 31.5512 23.9157 73.4639 71.9277 87.1687 89.0211 5.06024 96.6265 97.741 85.4819 63.8253 55.4669 38.9307 43.9006 g 0 24.1867 26.506 16.747 13.2982 36.7169 55.3916 13.3133 3.49398 1.4759 3.43373 62.756 1.95783 1.0241 0.240964 7.5 19.9699 21.9277 22.003 t 0 18.2078 16.3855 20.0602 25.753 11.2048 11.4157 9.51807 18.9458 0.722892 4.44277 23.4488 0.963855 0.240964 13.8554 12.0783 17.1837 27.6205 22.8012

M00787_2.00_shift6 (M00787_2.00)
; positions_7nt_m3 versus M00787_2.00; m=136/154; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.437841; ------rccmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 25.986 23.1178 19.3153 50.6834 0.194537 30.2468 0.00336185 0.00625172 2.24714 39.1927 0 0 0 c 0 0 0 0 0 0 15.6045 47.0215 51.4647 34.6604 99.7699 0.00388508 99.9566 99.9931 79.0168 22.3872 0 0 0 g 0 0 0 0 0 0 41.1638 13.0737 10.2872 8.63306 0.00306676 62.1399 0.00261821 0.000459717 0.0148413 12.4098 0 0 0 t 0 0 0 0 0 0 17.2456 16.787 18.9328 6.02308 0.0324799 7.60943 0.0374307 0 18.7213 26.0102 0 0 0

M08935_2.00_shift9 (ZSCAN22)
; positions_7nt_m3 versus M08935_2.00 (ZSCAN22); m=137/154; ncol2=16; w=0; offset=1; strand=D; shift=9; score=0.436505; ---------CCTCCkCCmT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 3.57143 1.2605 2.94118 1.89076 1.2605 5.88235 0.840336 0.840336 25.4202 2.31092 c 0 0 0 0 0 0 0 0 0 84.6639 91.5966 2.10084 95.7983 85.9244 8.82353 95.7983 90.3361 54.6218 10.084 g 0 0 0 0 0 0 0 0 0 4.83193 0.630252 23.5294 0.420168 0.840336 31.0924 0.840336 0.420168 6.30252 1.47059 t 0 0 0 0 0 0 0 0 0 6.93277 6.51261 71.4286 1.89076 11.9748 54.2017 2.52101 8.40336 13.6555 86.1345

M08246_2.00_shift6 (KLF10)
; positions_7nt_m3 versus M08246_2.00 (KLF10); m=138/154; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.431256; ------gCCmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 21.554 6.673 2.8825 47.0175 0.7831 49.183 0.3685 0.2997 0.1386 40.7052 0 0 0 c 0 0 0 0 0 0 6.4761 87.4843 89.9687 50.1723 98.3641 0.2537 98.4802 99.0777 97.6252 23.5703 0 0 0 g 0 0 0 0 0 0 66.0954 3.0023 1.0613 1.8427 0.3461 44.1938 0.8289 0.3001 0.2082 1.8688 0 0 0 t 0 0 0 0 0 0 5.8745 2.8403 6.0874 0.9675 0.5068 6.3696 0.3225 0.3227 2.0279 33.8557 0 0 0

M08243_2.00_shift6 (KLF4)
; positions_7nt_m3 versus M08243_2.00 (KLF4); m=139/154; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.431256; ------gCCmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 21.5541 6.6731 2.8826 47.0176 0.7831 49.183 0.3685 0.2997 0.1386 40.7052 0 0 0 c 0 0 0 0 0 0 6.4761 87.4843 89.9686 50.1722 98.364 0.2536 98.4801 99.0776 97.6252 23.5703 0 0 0 g 0 0 0 0 0 0 66.0954 3.0022 1.0613 1.8427 0.346 44.1938 0.8289 0.3 0.2081 1.8688 0 0 0 t 0 0 0 0 0 0 5.8745 2.8404 6.0875 0.9675 0.5068 6.3696 0.3225 0.3227 2.028 33.8558 0 0 0

M07927_2.00_shift1 (EGR1)
; positions_7nt_m3 versus M07927_2.00 (EGR1); m=140/154; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.427528; -ccscscccCCGCCCmCGC ; cor=; Ncor= a 0 13.0705 16.1826 11.6183 17.0124 13.9004 13.0705 12.6556 12.0332 15.7676 1.0373 19.2946 0 0 0 43.5685 0 5.6017 0 c 0 48.1328 49.5851 44.1909 45.8506 38.1743 49.7925 47.3029 41.0788 76.3486 97.5104 0 100 100 94.6058 56.0166 100 0 92.1162 g 0 22.6141 22.8216 25.1037 18.4647 30.7054 20.5394 17.4274 21.9917 2.4896 0.2075 71.5768 0 0 0 0.4149 0 85.6846 4.3568 t 0 16.1826 11.4108 19.0871 18.6722 17.2199 16.5975 22.6141 24.8963 5.39421 1.2448 9.1286 0 0 5.3942 0 0 8.7137 3.527

M07929_2.00_shift0 (EGR1)
; positions_7nt_m3 versus M07929_2.00 (EGR1); m=141/154; ncol2=20; w=-8; offset=-8; strand=D; shift=0; score=0.42545; ccsccssccCCGCCCmCGC ; cor=; Ncor= a 13.9394 15.1515 12.7273 16.9697 17.1717 18.1818 10.101 16.9697 13.5354 18.3838 0.404 19.798 0 0 0 51.5151 0 7.0707 0 c 46.2626 45.6566 46.0606 44.2424 48.2828 35.5556 48.8889 44.4444 40 73.9394 97.9798 0 100 99.798 95.1515 47.6768 99.798 0.6061 90.3031 g 24.4444 22.6263 25.6566 23.0303 17.7778 29.4949 25.0505 18.7879 21.6162 0.8081 0 69.6969 0 0.202 0 0.808099 0.202 80.202 4.2424 t 15.3535 16.5657 15.5556 15.7576 16.7677 16.7677 15.9596 19.798 24.8485 6.8687 1.6162 10.5051 0 0 4.8485 0 0 12.1212 5.45451

M08907_2.00_shift0 (KLF15)
; positions_7nt_m3 versus M08907_2.00 (KLF15); m=142/154; ncol2=19; w=-8; offset=-8; strand=D; shift=0; score=0.42457; CCycyCCcybCyCCkCCYy ; cor=; Ncor= a 6.88935 7.51566 14.6138 5.21921 3.34029 1.25261 3.13152 13.9875 20.8768 4.38413 0.835073 5.21921 8.76827 0.626305 10.8559 0.208768 0 3.34029 11.0647 c 73.0689 74.3215 44.6764 66.5971 57.62 77.0355 79.7495 58.2463 28.6013 29.8539 86.8476 42.38 88.5177 91.858 0 97.4948 99.7912 69.5198 54.2797 g 1.67015 9.39457 12.9436 10.4384 13.3612 3.13152 2.08768 4.38413 16.0752 34.4468 0.626305 3.13152 1.46138 0.626305 35.4906 0.626305 0.208768 1.25261 3.54906 t 18.3716 8.76827 27.7662 17.7453 25.6785 18.5804 15.0313 23.382 34.4468 31.3152 11.691 49.2693 1.25261 6.88935 53.6534 1.67015 0 25.8873 31.1065

M08987_2.00_shift0 (M08987_2.00)
; positions_7nt_m3 versus M08987_2.00; m=143/154; ncol2=19; w=-8; offset=-8; strand=D; shift=0; score=0.42457; CCycyCCcybCyCCkCCYy ; cor=; Ncor= a 6.88935 7.51566 14.6138 5.21921 3.34029 1.25261 3.13152 13.9875 20.8768 4.38413 0.835073 5.21921 8.76827 0.626305 10.8559 0.208768 0 3.34029 11.0647 c 73.0689 74.3215 44.6764 66.5971 57.62 77.0355 79.7495 58.2463 28.6013 29.8539 86.8476 42.38 88.5177 91.858 0 97.4948 99.7912 69.5198 54.2797 g 1.67015 9.39457 12.9436 10.4384 13.3612 3.13152 2.08768 4.38413 16.0752 34.4468 0.626305 3.13152 1.46138 0.626305 35.4906 0.626305 0.208768 1.25261 3.54906 t 18.3716 8.76827 27.7662 17.7453 25.6785 18.5804 15.0313 23.382 34.4468 31.3152 11.691 49.2693 1.25261 6.88935 53.6534 1.67015 0 25.8873 31.1065

M08893_2.00_shift1 (VEZF1)
; positions_7nt_m3 versus M08893_2.00 (VEZF1); m=144/154; ncol2=22; w=-7; offset=-7; strand=D; shift=1; score=0.420257; -yyycyccycCTCCyycyy ; cor=; Ncor= a 0 9.8 6.8 5.4 12.2 8.2 5.4 11.2 9.6 4.4 2.2 8 3.4 7 5.6 12.6 5 9.8 5.6 c 0 52.4 55.8 54.2 56.8 27.2 67.2 64.6 58.4 67 70.4 1.2 83 86 58.4 49.8 64.4 50 35 g 0 4.2 6.6 2.2 9.8 18.2 12.4 3.2 4.6 8 2.6 8.6 11.8 1.2 6.4 11.2 11.2 6 8.8 t 0 33.6 30.8 38.2 21.2 46.4 15 21 27.4 20.6 24.8 82.2 1.8 5.8 29.6 26.4 19.4 34.2 50.6

M00142_2.00_shift7 (ZNF691)
; positions_7nt_m3 versus M00142_2.00 (ZNF691); m=145/154; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score=0.418321; -------GTrCTCmy---- ; cor=; Ncor= a 0 0 0 0 0 0 0 4.12103 1.98931 34.2822 1.89551 0.0094304 0.0094304 26.7434 10.01 0 0 0 0 c 0 0 0 0 0 0 0 1.3828 0.00989707 0.961538 97.1426 1.89551 98.0856 52.3129 28.3311 0 0 0 0 g 0 0 0 0 0 0 0 89.006 18.8143 64.7468 0.0094304 0.952471 0.0094304 12.7964 10.01 0 0 0 0 t 0 0 0 0 0 0 0 5.49014 79.1865 0 0.952471 97.1426 1.89551 8.14737 51.6489 0 0 0 0

M09163_2.00_rc_shift7 (NKX2-4,NKX2-5,NKX2-6_rc)
; positions_7nt_m3 versus M09163_2.00_rc (NKX2-4,NKX2-5,NKX2-6_rc); m=146/154; ncol2=8; w=-1; offset=-1; strand=R; shift=7; score=0.414593; -------sCwCTymm---- ; cor=; Ncor= a 0 0 0 0 0 0 0 4.40882 3.00601 37.6754 0 0.400802 2.40481 27.2545 41.8838 0 0 0 0 c 0 0 0 0 0 0 0 48.497 76.9539 1.80361 95.992 0 51.9038 53.7074 31.0621 0 0 0 0 g 0 0 0 0 0 0 0 30.2605 0.200401 6.01202 0.400802 1.60321 3.40681 11.4228 16.4329 0 0 0 0 t 0 0 0 0 0 0 0 16.8337 19.8397 54.509 3.60721 97.996 42.2846 7.61523 10.6212 0 0 0 0

M07709_2.00_shift6 (ZKSCAN5)
; positions_7nt_m3 versus M07709_2.00 (ZKSCAN5); m=147/154; ncol2=9; w=-2; offset=-2; strand=D; shift=6; score=0.411117; ------TCACCTCCy---- ; cor=; Ncor= a 0 0 0 0 0 0 0.0739645 0.0739645 87.0562 6.28698 0.0739645 0.0739645 0.0739645 3.3284 13.9792 0 0 0 0 c 0 0 0 0 0 0 0.0739645 98.003 0.0739645 93.5651 90.6065 0.0739645 99.7781 88.2396 32.9142 0 0 0 0 g 0 0 0 0 0 0 0.0739645 0.0739645 5.99112 0.0739645 0.0739645 0.0739645 0.0739645 0.0739645 12.796 0 0 0 0 t 0 0 0 0 0 0 99.7781 1.84911 6.8787 0.0739645 9.24556 99.7781 0.0739645 8.35799 40.3107 0 0 0 0

M08298_2.00_shift5 (KLF7)
; positions_7nt_m3 versus M08298_2.00 (KLF7); m=148/154; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.409938; -----ggCcmCGCCCm--- ; cor=; Ncor= a 0 0 0 0 0 20.9622 15.4639 9.2784 19.9313 32.3024 0 19.244 0 0 0 29.2096 0 0 0 c 0 0 0 0 0 20.2749 17.5258 88.6598 61.512 67.6976 100 0 100 100 100 37.1134 0 0 0 g 0 0 0 0 0 46.7354 57.0447 0 0 0 0 80.756 0 0 0 9.622 0 0 0 t 0 0 0 0 0 12.0275 9.9656 2.0619 18.5567 0 0 0 0 0 0 24.055 0 0 0

M08962_2.00_shift0 (M08962_2.00)
; positions_7nt_m3 versus M08962_2.00; m=149/154; ncol2=19; w=-8; offset=-8; strand=D; shift=0; score=0.409664; yyccmdgCCMCdCCCyycc ; cor=; Ncor= a 5.24194 10.6855 6.45161 11.6935 25.8065 25 10.8871 4.6371 4.23387 26.0081 2.21774 28.2258 1.20968 2.01613 13.1048 15.3226 8.46774 5.04032 14.9194 c 45.5645 43.3468 60.2823 60.8871 52.2177 13.7097 20.7661 83.6694 68.3468 68.9516 85.4839 0 89.1129 95.5645 81.4516 36.8952 28.0242 47.9839 51.0081 g 23.3871 11.0887 17.1371 12.7016 15.7258 31.8548 45.3629 3.02419 6.45161 2.21774 0.604839 45.7661 5.24194 0 0.604839 1.81452 18.9516 24.7984 18.5484 t 25.8065 34.879 16.129 14.7177 6.25 29.4355 22.9839 8.66935 20.9677 2.82258 11.6935 26.0081 4.43548 2.41935 4.83871 45.9677 44.5565 22.1774 15.5242

M08857_2.00_shift0 (KLF6)
; positions_7nt_m3 versus M08857_2.00 (KLF6); m=150/154; ncol2=19; w=-8; offset=-8; strand=D; shift=0; score=0.409664; yyccmdgCCMCdCCCyycc ; cor=; Ncor= a 5.24194 10.6855 6.45161 11.6935 25.8065 25 10.8871 4.6371 4.23387 26.0081 2.21774 28.2258 1.20968 2.01613 13.1048 15.3226 8.46774 5.04032 14.9194 c 45.5645 43.3468 60.2823 60.8871 52.2177 13.7097 20.7661 83.6694 68.3468 68.9516 85.4839 0 89.1129 95.5645 81.4516 36.8952 28.0242 47.9839 51.0081 g 23.3871 11.0887 17.1371 12.7016 15.7258 31.8548 45.3629 3.02419 6.45161 2.21774 0.604839 45.7661 5.24194 0 0.604839 1.81452 18.9516 24.7984 18.5484 t 25.8065 34.879 16.129 14.7177 6.25 29.4355 22.9839 8.66935 20.9677 2.82258 11.6935 26.0081 4.43548 2.41935 4.83871 45.9677 44.5565 22.1774 15.5242

M08021_2.00_shift5 (M08021_2.00)
; positions_7nt_m3 versus M08021_2.00; m=151/154; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.405495; -----rrCCmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 27.5748 27.2425 4.6512 3.6545 45.515 0 52.4917 0 0 0 39.5349 0 0 0 c 0 0 0 0 0 21.2625 6.9767 87.3754 86.7109 49.5017 100 0 100 100 98.6711 19.6013 0 0 0 g 0 0 0 0 0 39.5349 56.1462 2.3256 0 0.996699 0 36.8771 0 0 0 2.6578 0 0 0 t 0 0 0 0 0 11.6279 9.6346 5.6478 9.63459 3.9867 0 10.6312 0 0 1.3289 38.206 0 0 0

M04456_2.00_shift5 (KLF2)
; positions_7nt_m3 versus M04456_2.00 (KLF2); m=152/154; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.404719; -----srCCmCrCCCm--- ; cor=; Ncor= a 0 0 0 0 0 21.2044 38.0149 6.81334 0.934809 48.188 0 37.9653 0 1.70501 0 31.1281 0 0 0 c 0 0 0 0 0 34.4925 19.6371 83.6764 87.0111 42.1117 100 1.9024 99.2424 95.724 90.5994 30.393 0 0 0 g 0 0 0 0 0 26.4348 37.46 6.52945 10.9717 6.82561 0 59.5533 0.701459 2.24628 3.61168 17.7269 0 0 0 t 0 0 0 0 0 17.8682 4.88794 2.98084 1.08241 2.87466 0 0.578991 0.0561167 0.324763 5.78893 20.752 0 0 0

M07707_2.00_shift11 (ZNF846)
; positions_7nt_m3 versus M07707_2.00 (ZNF846); m=153/154; ncol2=6; w=0; offset=3; strand=D; shift=11; score=0.403504; -----------TCCCGs-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 100 100 100 0 50 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 50 0 0 t 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0

M04464_2.00_shift5 (KLF4)
; positions_7nt_m3 versus M04464_2.00 (KLF4); m=154/154; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.400747; -----crCCmCrCCCa--- ; cor=; Ncor= a 0 0 0 0 0 16.7449 31.7536 4.96811 6.89314 53.6107 0 33.5846 0 1.09954 0 38.0943 0 0 0 c 0 0 0 0 0 43.525 22.8541 85.8006 84.3008 38.4297 96.0541 0 99.7269 98.6111 96.1806 22.9896 0 0 0 g 0 0 0 0 0 18.0164 35.545 3.12185 4.86478 4.50207 0.244269 61.163 0 0.270062 0.865475 15.0068 0 0 0 t 0 0 0 0 0 21.7136 9.84729 6.10943 3.94129 3.45759 3.70162 5.25245 0.273117 0.0192901 2.9539 23.9092 0 0 0

One-to-n matrix alignment; reference matrix: positions_6nt_m4_shift6 ; 258 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
positions_6nt_m4_shift6 (positions_6nt_m4)
; positions_6nt_m4; m=0 (reference); ncol1=11; shift=6; ncol=17; ------aaAATAAAAww ; Alignment reference a 0 0 0 0 0 0 8675 10232 21805 22653 1335 22033 23187 23306 22062 8968 8367 c 0 0 0 0 0 0 4672 4882 1449 732 1883 896 752 749 1034 5133 5690 g 0 0 0 0 0 0 6067 4843 748 775 1522 1444 896 614 1025 4585 5167 t 0 0 0 0 0 0 6317 5774 1729 1571 20991 1358 896 1062 1610 7045 6507

M03129_2.00_rc_shift6 (HOXC13_rc)
; positions_6nt_m4 versus M03129_2.00_rc (HOXC13_rc); m=1/257; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.824863; ------cyAATAAAAm- ; cor=; Ncor= a 0 0 0 0 0 0 8.75 4.50539 69.3231 96.5046 0.312012 88.8112 98.1453 97.6923 79.8742 36.063 0 c 0 0 0 0 0 0 66.1458 62.1939 16.1572 0 0.312012 0 0.309119 1.23077 6.41509 27.874 0 g 0 0 0 0 0 0 19.6875 2.15475 0.10917 0.607903 0.312012 0.699301 0 0 5.15723 12.7559 0 t 0 0 0 0 0 0 5.41667 31.1459 14.4105 2.88754 99.064 10.4895 1.5456 1.07692 8.55346 23.3071 0

M03247_2.00_rc_shift6 (M03247_2.00_rc)
; positions_6nt_m4 versus M03247_2.00_rc; m=2/257; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.822104; ------syaATAAAah- ; cor=; Ncor= a 0 0 0 0 0 0 7.83909 4.30162 67.7388 95.208 0 85.9241 98.0447 96.517 64.4037 34.6464 0 c 0 0 0 0 0 0 54.3063 53.2895 16.8221 0 0.0473709 0.489596 0 2.38313 17.7982 30.3749 0 g 0 0 0 0 0 0 31.64 0 0 0.271248 0.189484 2.24398 0 0.091659 5.04587 8.68533 0 t 0 0 0 0 0 0 6.21454 42.4089 15.439 4.5208 99.7631 11.3423 1.95531 1.00825 12.7523 26.2933 0

M03253_2.00_rc_shift6 (HOXC6_rc)
; positions_6nt_m4 versus M03253_2.00_rc (HOXC6_rc); m=3/257; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.818596; ------gyaATAAAAa- ; cor=; Ncor= a 0 0 0 0 0 0 16.2188 1.85654 65.8694 93.9361 3.04963 73.7947 98.8604 94.0379 76.2135 47.3912 0 c 0 0 0 0 0 0 11.3017 46.9198 22.5892 2.86952 0 0.311968 0 1.27371 7.35779 20.5823 0 g 0 0 0 0 0 0 66.133 0.534459 6.83371 2.5176 0.748544 1.27623 0 1.54472 6.45728 10.4353 0 t 0 0 0 0 0 0 6.34648 50.6892 4.70767 0.676773 96.2018 24.6171 1.1396 3.14363 9.97145 21.5912 0

M03141_2.00_rc_shift6 (HOXD13_rc)
; positions_6nt_m4 versus M03141_2.00_rc (HOXD13_rc); m=4/257; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.811776; ------symATAAAAm- ; cor=; Ncor= a 0 0 0 0 0 0 4.59982 1.70455 60.9389 92.4731 0 86.2155 98.9928 99.8549 80.6565 35.3198 0 c 0 0 0 0 0 0 63.2935 57.2443 30.7352 0 0.145138 0 0.431655 0.145138 8.7925 30.0872 0 g 0 0 0 0 0 0 27.0469 0.568182 0 3.62903 0 0 0 0 3.98593 10.6105 0 t 0 0 0 0 0 0 5.0598 40.483 8.32595 3.89785 99.8549 13.7845 0.57554 0 6.56506 23.9826 0

M03100_2.00_rc_shift6 (HOXA13_rc)
; positions_6nt_m4 versus M03100_2.00_rc (HOXA13_rc); m=5/257; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.80524; ------cyaATAAAam- ; cor=; Ncor= a 0 0 0 0 0 0 16.1458 0.262467 66.9377 88.8489 0 89.4928 93.9163 98.8 64.1558 42.1053 0 c 0 0 0 0 0 0 64.3229 64.8294 18.9702 0 0 3.26087 0 1.2 15.5844 29.1498 0 g 0 0 0 0 0 0 18.4896 2.09974 2.43902 0 0 1.81159 0 0 11.4286 9.31174 0 t 0 0 0 0 0 0 1.04167 32.8084 11.6531 11.1511 100 5.43478 6.08365 0 8.83117 19.4332 0

M09202_2.00_rc_shift6 (M09202_2.00_rc)
; positions_6nt_m4 versus M09202_2.00_rc; m=6/257; ncol2=11; w=0; offset=0; strand=R; shift=6; score=0.804515; ------cCaATWAwAyc ; cor=; Ncor= a 0 0 0 0 0 0 3.10345 17.2414 59.3103 82.7586 0 73.7931 93.7931 58.6207 80.6897 22.069 11.2069 c 0 0 0 0 0 0 67.931 76.5517 23.4483 0 0 0 0 12.4138 19.3103 37.2414 50.5172 g 0 0 0 0 0 0 18.9655 6.2069 6.2069 17.2414 0 0 0 0 0 6.2069 19.4828 t 0 0 0 0 0 0 10 0 11.0345 0 100 26.2069 6.2069 28.9655 0 34.4828 18.7931

M09134_2.00_rc_shift6 (HOXA13_rc)
; positions_6nt_m4 versus M09134_2.00_rc (HOXA13_rc); m=7/257; ncol2=11; w=0; offset=0; strand=R; shift=6; score=0.804515; ------cCaATWAwAyc ; cor=; Ncor= a 0 0 0 0 0 0 3.10345 17.2414 59.3103 82.7586 0 73.7931 93.7931 58.6207 80.6897 22.069 11.2069 c 0 0 0 0 0 0 67.931 76.5517 23.4483 0 0 0 0 12.4138 19.3103 37.2414 50.5172 g 0 0 0 0 0 0 18.9655 6.2069 6.2069 17.2414 0 0 0 0 0 6.2069 19.4828 t 0 0 0 0 0 0 10 0 11.0345 0 100 26.2069 6.2069 28.9655 0 34.4828 18.7931

M05104_2.00_rc_shift6 (HOXC5,HOXC6,HOXD9_rc)
; positions_6nt_m4 versus M05104_2.00_rc (HOXC5,HOXC6,HOXD9_rc); m=8/257; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.799078; ------GymATAAAAm- ; cor=; Ncor= a 0 0 0 0 0 0 14.7175 0.429345 61.6247 98.915 1.00241 80.3284 99.4128 98.9425 76.0228 31.7739 0 c 0 0 0 0 0 0 4.67931 64.9431 33.9785 1.08504 0 0.165688 0 0.732839 8.95937 30.5738 0 g 0 0 0 0 0 0 75.5062 0.0186672 1.86619 0 0 0 0.0745643 0 5.4526 15.3853 0 t 0 0 0 0 0 0 5.09698 34.6089 2.53062 0 98.9976 19.5059 0.512629 0.324675 9.56522 22.267 0

M03098_2.00_rc_shift6 (HOXA13_rc)
; positions_6nt_m4 versus M03098_2.00_rc (HOXA13_rc); m=9/257; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.789298; ------cCmATAAAam- ; cor=; Ncor= a 0 0 0 0 0 0 12.1485 6.32737 55.2463 95.0276 0 82.1656 92.1429 92.1429 58.8369 31.528 0 c 0 0 0 0 0 0 58.0427 70.9766 27.7302 0 3.5514 2.86624 0.892857 5 19.9544 36.7505 0 g 0 0 0 0 0 0 19.685 1.51307 1.39186 0.368324 0 0.636943 1.60714 0 7.63968 8.31721 0 t 0 0 0 0 0 0 10.1237 21.1829 15.6317 4.60405 96.4486 14.3312 5.35714 2.85714 13.569 23.4043 0

M05334_2.00_rc_shift6 (HOXC5,HOXC6,HOXC9_rc)
; positions_6nt_m4 versus M05334_2.00_rc (HOXC5,HOXC6,HOXC9_rc); m=10/257; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.78844; ------GymATWAAAy- ; cor=; Ncor= a 0 0 0 0 0 0 9.82014 0 61.6409 95.1728 1.78371 73.9996 99.2772 99.747 69.4269 23.6483 0 c 0 0 0 0 0 0 7.97769 54.1721 33.6645 1.53379 0 0.223985 0 0 11.592 33.6769 0 g 0 0 0 0 0 0 76.6059 0 0.0655539 3.20772 0 0 0 0 7.4459 14.2495 0 t 0 0 0 0 0 0 5.59629 45.8279 4.62912 0.0856431 98.2163 25.7764 0.722813 0.252958 11.5352 28.4254 0

M03175_2.00_rc_shift6 (HOXB13_rc)
; positions_6nt_m4 versus M03175_2.00_rc (HOXB13_rc); m=11/257; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.787715; ------CCaATAAAAm- ; cor=; Ncor= a 0 0 0 0 0 0 7.41236 3.22043 64.4645 94.4312 0 88.7648 99.3924 96.6632 72.3465 35.5268 0 c 0 0 0 0 0 0 74.418 77.2071 23.1803 0.747029 0.251076 0.702202 0 2.6764 14.308 36.4617 0 g 0 0 0 0 0 0 13.8614 0.388673 0.278164 1.29032 0 0.829876 0 0.0347584 4.37045 6.90399 0 t 0 0 0 0 0 0 4.30827 19.1838 12.077 3.53141 99.7489 9.70316 0.607577 0.625652 8.97503 21.1075 0

M09572_2.00_rc_shift6 (M09572_2.00_rc)
; positions_6nt_m4 versus M09572_2.00_rc; m=12/257; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.786813; ------GymATAAAay- ; cor=; Ncor= a 0 0 0 0 0 0 20.9 0.1 48.9 99.7 0.1 99.7 99.7 99.7 67.8 24.3 0 c 0 0 0 0 0 0 5.8 44.4 49.3 0.1 0.1 0.1 0.1 0.1 11.5 28.5 0 g 0 0 0 0 0 0 73.3 0.1 0.1 0.1 0.1 0.1 0.1 0.1 7.3 15.4 0 t 0 0 0 0 0 0 0.1 55.4 1.7 0.1 99.7 0.1 0.1 0.1 13.5 31.8 0

M05332_2.00_rc_shift6 (HOXC5,HOXC6,HOXC9_rc)
; positions_6nt_m4 versus M05332_2.00_rc (HOXC5,HOXC6,HOXC9_rc); m=13/257; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.782967; ------GyMATAAAAm- ; cor=; Ncor= a 0 0 0 0 0 0 1.98058 0 68.1787 99.9668 0.298211 80.33 99.4513 100 84.5367 26.1416 0 c 0 0 0 0 0 0 0.440838 58.2414 29.1385 0 0 0 0.548652 0 6.19767 35.7461 0 g 0 0 0 0 0 0 96.1219 0 0.729596 0.0332226 0 0 0 0 3.27021 13.7122 0 t 0 0 0 0 0 0 1.45668 41.7586 1.95314 0 99.7018 19.67 0 0 5.99539 24.4001 0

M05114_2.00_rc_shift6 (HOXC6,HOXD10_rc)
; positions_6nt_m4 versus M05114_2.00_rc (HOXC6,HOXD10_rc); m=14/257; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.780835; ------GymATAAAAy- ; cor=; Ncor= a 0 0 0 0 0 0 2.08132 0 66.1914 100 1.91147 85.0044 100 99.8464 80.8458 20.5747 0 c 0 0 0 0 0 0 0 36.6855 32.9939 0 0 0 0 0.15361 9.16252 40.1744 0 g 0 0 0 0 0 0 94.3853 0 0.814664 0 0 0 0 0 3.93864 12.7245 0 t 0 0 0 0 0 0 3.5334 63.3145 0 0 98.0885 14.9956 0 0 6.05307 26.5264 0

M05109_2.00_rc_shift6 (HOXC5,HOXC6,HOXD9_rc)
; positions_6nt_m4 versus M05109_2.00_rc (HOXC5,HOXC6,HOXD9_rc); m=15/257; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.780377; ------GymATAAAAh- ; cor=; Ncor= a 0 0 0 0 0 0 6.77436 0 61.4965 96.0721 1.2969 75.0046 99.2539 100 74.4619 25.356 0 c 0 0 0 0 0 0 4.54403 59.5733 32.4827 1.32691 0 0.0366703 0 0 10.0205 35.4703 0 g 0 0 0 0 0 0 85.2684 0.25602 2.53683 2.5775 0 0 0 0 5.53356 13.2555 0 t 0 0 0 0 0 0 3.41324 40.1707 3.48391 0.0234852 98.7031 24.9587 0.746088 0 9.98407 25.9182 0

M03229_2.00_rc_shift6 (HOXC10,HOXC6_rc)
; positions_6nt_m4 versus M03229_2.00_rc (HOXC10,HOXC6_rc); m=16/257; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.777014; ------gymATwAAaw- ; cor=; Ncor= a 0 0 0 0 0 0 16.183 1.12086 53.0742 85.2054 6.59204 62.6422 94.7275 84.9163 58.7729 38.4554 0 c 0 0 0 0 0 0 20.1945 47.8731 37.0883 6.44429 0 1.16339 0.353179 7.21393 13.398 21.2517 0 g 0 0 0 0 0 0 57.0582 0.297097 8.32509 7.1931 0 1.75801 0.782038 2.48756 13.2415 14.6205 0 t 0 0 0 0 0 0 6.56435 50.709 1.51237 1.15725 93.408 34.4364 4.13724 5.38218 14.5876 25.6724 0

M03283_2.00_rc_shift6 (HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M03283_2.00_rc (HOXC5,HOXC6_rc); m=17/257; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.776674; ------gymATwAAaw- ; cor=; Ncor= a 0 0 0 0 0 0 23.2919 4.75248 63.1922 83.6207 5.88235 50.2538 91.0798 93.2692 63.8158 42.5641 0 c 0 0 0 0 0 0 13.6646 54.4554 25.0814 0.862069 3.16742 1.52284 0.938967 3.36538 8.55263 14.359 0 g 0 0 0 0 0 0 60.2484 2.37624 11.7264 13.3621 3.16742 0 0 0 13.1579 9.74359 0 t 0 0 0 0 0 0 2.79503 38.4158 0 2.15517 87.7828 48.2234 7.98122 3.36538 14.4737 33.3333 0

M03228_2.00_rc_shift6 (HOXC10,HOXC6_rc)
; positions_6nt_m4 versus M03228_2.00_rc (HOXC10,HOXC6_rc); m=18/257; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.776668; ------scmATwAAam- ; cor=; Ncor= a 0 0 0 0 0 0 22.9881 22.912 29.4875 96.4082 3.01548 63.1884 96.724 90.8811 65.6658 41.8959 0 c 0 0 0 0 0 0 38.4003 47.7654 56.3051 0.571429 0.733496 2.23602 0 5.07888 15.3183 26.4917 0 g 0 0 0 0 0 0 28.6457 6.22851 2.12157 2.61224 0 0 0.12285 1.69296 6.58882 7.65975 0 t 0 0 0 0 0 0 9.96586 23.094 12.0858 0.408163 96.251 34.5756 3.15315 2.34706 12.427 23.9526 0

M05290_2.00_rc_shift6 (HOXB9,HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M05290_2.00_rc (HOXB9,HOXC5,HOXC6_rc); m=19/257; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.773432; ------GymATWAAay- ; cor=; Ncor= a 0 0 0 0 0 0 15.6062 1.47826 56.8627 88.7755 0 68.1325 97.416 97.1649 65.3757 20.1413 0 c 0 0 0 0 0 0 3.95177 58.3478 35.2438 1.64835 0 0 0 2.23368 13.6994 31.5371 0 g 0 0 0 0 0 0 75.7535 0.173913 3.46908 7.29984 0 1.92771 0 0.601375 7.74566 14.0459 0 t 0 0 0 0 0 0 4.68855 40 4.42433 2.2763 100 29.9398 2.58398 0 13.1792 34.2756 0

M05117_2.00_shift5 (HOXC6,HOXD10)
; positions_6nt_m4 versus M05117_2.00 (HOXC6,HOXD10); m=20/257; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.766612; -----grymATAAAAh- ; cor=; Ncor= a 0 0 0 0 0 22.9161 33.1789 2.23572 67.5634 98.1169 5.1393 87.2968 99.9427 97.7324 82.9807 33.6293 0 c 0 0 0 0 0 10.0831 10.0556 31.4656 30.2303 0.140528 0 0 0.0572574 0 6.8695 33.1997 0 g 0 0 0 0 0 55.3423 53.9234 1.40767 1.35475 1.74255 0.432783 0 0 0.167973 3.56549 8.1352 0 t 0 0 0 0 0 11.6586 2.84214 64.891 0.851558 0 94.4279 12.7032 0 2.09966 6.58426 25.0358 0

M09672_2.00_shift7 (HOXC5,HOXC6)
; positions_6nt_m4 versus M09672_2.00 (HOXC5,HOXC6); m=21/257; ncol2=10; w=0; offset=1; strand=D; shift=7; score=0.766561; -------tmATAAAAcm ; cor=; Ncor= a 0 0 0 0 0 0 0 14.2857 30.9524 85.7143 0 83.3333 100 88.6905 72.0238 19.6429 43.4524 c 0 0 0 0 0 0 0 19.0476 61.9048 0 0 0 0 7.7381 5.35714 50.5952 31.5476 g 0 0 0 0 0 0 0 0 0 14.2857 0 7.14286 0 0.595238 2.97619 12.5 10.119 t 0 0 0 0 0 0 0 66.6667 7.14286 0 100 9.52381 0 2.97619 19.6429 17.2619 14.881

M05111_2.00_rc_shift6 (HOXC5,HOXC6,HOXD9_rc)
; positions_6nt_m4 versus M05111_2.00_rc (HOXC5,HOXC6,HOXD9_rc); m=22/257; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.761118; ------GymATWAAac- ; cor=; Ncor= a 0 0 0 0 0 0 10.1076 0 58.1854 91.6367 1.29834 71.4686 98.4293 94.9747 61.6287 19.037 0 c 0 0 0 0 0 0 6.23039 59.7592 37.84 1.82145 0 0.580232 0 4.73278 14.4755 40.2856 0 g 0 0 0 0 0 0 80.0538 0 0 4.84864 0.0276243 0 0 0 10.4382 17.8331 0 t 0 0 0 0 0 0 3.60825 40.2408 3.97459 1.69318 98.674 27.9512 1.57068 0.292475 13.4576 22.8443 0

M05112_2.00_rc_shift6 (HOXC6,HOXD10_rc)
; positions_6nt_m4 versus M05112_2.00_rc (HOXC6,HOXD10_rc); m=23/257; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.750301; ------GymATAAAay- ; cor=; Ncor= a 0 0 0 0 0 0 4.5835 0 58.1965 98.303 0.710702 79.0613 100 97.0973 60.4787 18.9474 0 c 0 0 0 0 0 0 0 57.702 39.0591 0 0 0 0 2.04415 15.2024 37.4316 0 g 0 0 0 0 0 0 94.6592 0 1.9603 1.69702 0 0 0 0 11.7647 16.5895 0 t 0 0 0 0 0 0 0.757274 42.298 0.784122 0 99.2893 20.9387 0 0.858545 12.5541 27.0316 0

M05119_2.00_shift5 (HOXC6,HOXD10)
; positions_6nt_m4 versus M05119_2.00 (HOXC6,HOXD10); m=24/257; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.748059; -----gGYAATAAAAh- ; cor=; Ncor= a 0 0 0 0 0 23.2891 9.95851 0 77.8219 100 2.1978 91.5809 100 99.5931 88.7579 29.6221 0 c 0 0 0 0 0 11.5424 8.79668 30.4392 22.1781 0 0 0 0 0 9.15684 34.525 0 g 0 0 0 0 0 50.8682 81.2448 0 0 0 0 0 0 0 2.08522 8.27375 0 t 0 0 0 0 0 14.3003 0 69.5608 0 0 97.8022 8.41908 0 0.406918 0 27.5792 0

M03135_2.00_rc_shift6 (HOXC12_rc)
; positions_6nt_m4 versus M03135_2.00_rc (HOXC12_rc); m=25/257; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.746962; ------gyAATAAAA-- ; cor=; Ncor= a 0 0 0 0 0 0 18.1119 1.02681 74.4832 89.3568 11.6416 84.6756 97.574 97.3543 77.8879 0 0 c 0 0 0 0 0 0 11.7285 38.5625 11.9509 1.18832 0 1.12607 0.0846262 1.12581 8.57915 0 0 g 0 0 0 0 0 0 66.5064 0.34227 11.025 7.98243 0.0510595 0.709914 0.0564175 0.168871 5.56181 0 0 t 0 0 0 0 0 0 3.65314 60.0685 2.54091 1.47249 88.3074 13.4884 2.28491 1.35097 7.97118 0 0

M05124_2.00_rc_shift5 (HOXD13_rc)
; positions_6nt_m4 versus M05124_2.00_rc (HOXD13_rc); m=26/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.745035; -----rsyAATAAAac- ; cor=; Ncor= a 0 0 0 0 0 36.4912 17.084 2.31729 71.1932 95.1301 0 87.0574 98.8904 94.0633 59.6902 23.8596 0 c 0 0 0 0 0 24.2105 48.9194 63.5472 18.7718 0 0 0 0 2.90237 20.3851 45.5439 0 g 0 0 0 0 0 28.9825 28.9194 0.935829 0 1.33422 0 0.610501 0 0.395778 3.9347 8.77193 0 t 0 0 0 0 0 10.3158 5.07719 33.1996 10.0349 3.53569 100 12.3321 1.10957 2.63852 15.99 21.8246 0

M04979_2.00_rc_shift5 (HOXA13_rc)
; positions_6nt_m4 versus M04979_2.00_rc (HOXA13_rc); m=27/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.742339; -----asYAATAAAAm- ; cor=; Ncor= a 0 0 0 0 0 30.6698 7.80094 0.940975 74.6491 94.9777 0 96.376 95.9414 94.5556 70.5638 30.4462 0 c 0 0 0 0 0 24.9119 57.2293 72.7973 17.0175 0 0 0 0 2.11111 18.6567 44.007 0 g 0 0 0 0 0 22.7967 28.1103 0 0 2.79018 0 0 0 0 3.56551 6.3867 0 t 0 0 0 0 0 21.6216 6.85945 26.2618 8.33333 2.23214 100 3.62401 4.05862 3.33333 7.21393 19.1601 0

M05106_2.00_rc_shift6 (HOXC5,HOXC6,HOXD9_rc)
; positions_6nt_m4 versus M05106_2.00_rc (HOXC5,HOXC6,HOXD9_rc); m=28/257; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.740505; ------GymATwAAac- ; cor=; Ncor= a 0 0 0 0 0 0 13.8921 0.833611 52.2121 80.5525 1.84818 67.5449 95.7502 89.0153 50.5524 15.0639 0 c 0 0 0 0 0 0 8.66215 60.5869 41.0639 8.12568 0 1.83965 0.193175 6.37534 17.1851 43.3759 0 g 0 0 0 0 0 0 69.4373 0 1.63272 10.5092 0 1.88508 0 1.25711 15.6383 21.0491 0 t 0 0 0 0 0 0 8.00841 38.5795 5.09129 0.812568 98.1518 28.7304 4.05666 3.35229 16.6242 20.5111 0

M08283_2.00_rc_shift6 (MYNN_rc)
; positions_6nt_m4 versus M08283_2.00_rc (MYNN_rc); m=29/257; ncol2=12; w=0; offset=0; strand=R; shift=6; score=0.736918; ------AaAwTAArAGy ; cor=; Ncor= a 0 0 0 0 0 0 72.0912 67.3742 73.6635 65.8019 1.02201 99.4497 89.0723 63.6006 98.5063 0.0786164 2.27987 c 0 0 0 0 0 0 6.99686 10.1415 8.56918 1.33648 1.96541 0.0786164 1.65094 1.02201 0.0786164 0.707547 34.6698 g 0 0 0 0 0 0 12.3428 12.0283 13.2862 6.68239 3.22327 0.0786164 7.94025 30.8962 1.33648 98.1918 4.16667 t 0 0 0 0 0 0 8.56918 10.456 4.48113 26.1792 93.7893 0.393082 1.33648 4.48113 0.0786164 1.02201 58.8836

M00253_2.00_shift6 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1)
; positions_6nt_m4 versus M00253_2.00 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1); m=30/257; ncol2=11; w=0; offset=0; strand=D; shift=6; score=0.736786; ------tgwATAAwyAa ; cor=; Ncor= a 0 0 0 0 0 0 19.9681 17.6087 26.8585 80.7059 0.028741 89.438 89.8691 59.4016 24.5082 77.74 46.8931 c 0 0 0 0 0 0 19.9681 17.6087 17.8925 0.028741 0.028741 0.028741 10.0734 0.028741 35.6583 7.41999 17.7023 g 0 0 0 0 0 0 19.9681 47.1738 7.32644 19.2366 0.028741 0.028741 0.028741 9.48884 5.06064 7.41999 17.7023 t 0 0 0 0 0 0 40.0957 17.6087 47.9225 0.028741 99.9138 10.5045 0.028741 31.0808 34.7728 7.41999 17.7023

M03206_2.00_shift6 (HOXD12)
; positions_6nt_m4 versus M03206_2.00 (HOXD12); m=31/257; ncol2=9; w=0; offset=0; strand=D; shift=6; score=0.733856; ------gYaATAAAA-- ; cor=; Ncor= a 0 0 0 0 0 0 9.65944 0.627178 67.518 92.9666 11.3384 84.647 99.23 91.6444 75.5311 0 0 c 0 0 0 0 0 0 19.257 27.4564 14.6693 4.95942 0.767263 0.574713 0 4.53333 8.13187 0 0 g 0 0 0 0 0 0 63.839 0.0696864 16.8304 1.62308 0 0.246305 0 1.51111 7.98535 0 0 t 0 0 0 0 0 0 7.24458 71.8467 0.982318 0.450857 87.8943 14.532 0.769971 2.31111 8.35165 0 0

M03132_2.00_rc_shift5 (HOXC11_rc)
; positions_6nt_m4 versus M03132_2.00_rc (HOXC11_rc); m=32/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.733755; -----rgymATwAAaw- ; cor=; Ncor= a 0 0 0 0 0 38.2692 23.0514 3.31594 52.1985 76.1924 7.26854 67.8743 90.2529 88.7054 62.8371 36.3894 0 c 0 0 0 0 0 11.2963 15.9764 48.443 32.8983 7.53952 0 1.23626 1.34443 5.41136 12.0348 23.036 0 g 0 0 0 0 0 30.3245 52.0155 1.76738 6.47042 11.4579 0 1.94025 1.02433 1.44722 8.5692 14.7367 0 t 0 0 0 0 0 20.1099 8.95674 46.4737 8.43284 4.81016 92.7315 28.9492 7.37836 4.43605 16.5589 25.8379 0

M04981_2.00_rc_shift5 (HOXA13_rc)
; positions_6nt_m4 versus M04981_2.00_rc (HOXA13_rc); m=33/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.732039; -----mCYaATAAAAm- ; cor=; Ncor= a 0 0 0 0 0 29.6263 4.7443 1.00566 67.8744 97.316 0 91.7551 98.2517 95.9863 68.5784 27.6444 0 c 0 0 0 0 0 32.8292 69.2545 70.6474 20.1691 0 0 0 0.437063 1.87874 13.1788 36.4444 0 g 0 0 0 0 0 18.0605 20.5176 0 0.966184 0.865801 0 0 0.786713 0 5.2471 11.5556 0 t 0 0 0 0 0 19.484 5.48367 28.347 10.9903 1.81818 100 8.2449 0.524476 2.13493 12.9957 24.3556 0

M05085_2.00_shift5 (HOXC12)
; positions_6nt_m4 versus M05085_2.00 (HOXC12); m=34/257; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.730886; -----rGYAATAAAAh- ; cor=; Ncor= a 0 0 0 0 0 29.9584 13.2716 0 71.8475 90.7407 0 79.5455 90.7407 96.4567 68.2451 32.2449 0 c 0 0 0 0 0 19.6949 8.02469 28.3626 19.6481 2.22222 0.809717 2.27273 0 0 13.9276 30.6122 0 g 0 0 0 0 0 33.9806 75.6173 0 8.5044 6.66667 0 0.324675 3.33333 0 6.40669 11.4286 0 t 0 0 0 0 0 16.3662 3.08642 71.6374 0 0.37037 99.1903 17.8571 5.92593 3.54331 11.4206 25.7143 0

M03086_2.00_rc_shift5 (HOXA9,HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M03086_2.00_rc (HOXA9,HOXC5,HOXC6_rc); m=35/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.72915; -----rgymATWAAaa- ; cor=; Ncor= a 0 0 0 0 0 27.6187 17.441 1.78031 56.3391 85.3375 4.18998 69.4072 94.4125 89.1122 59.5199 35.9981 0 c 0 0 0 0 0 16.9769 12.6367 44.9965 30.3576 4.63293 0.125585 0.978223 0.405542 6.03934 14.7859 24.9254 0 g 0 0 0 0 0 35.7075 60.2776 0.686525 6.87013 7.31086 0 1.40911 0.856145 1.32908 11.0788 14.6761 0 t 0 0 0 0 0 19.697 9.64471 52.5367 6.43318 2.71866 95.6844 28.2054 4.32579 3.5194 14.6154 24.4004 0

M05395_2.00_rc_shift5 (HOXA10,HOXC6_rc)
; positions_6nt_m4 versus M05395_2.00_rc (HOXA10,HOXC6_rc); m=36/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.728355; -----gGymATAAAAm- ; cor=; Ncor= a 0 0 0 0 0 19.511 5.65533 0 66.6963 99.2672 1.43147 89.1947 100 99.9154 85.0716 29.735 0 c 0 0 0 0 0 9.82813 1.38316 38.8708 31.4553 0 0 0 0 0.0846433 6.3832 32.7484 0 g 0 0 0 0 0 60.4696 92.1695 0.108814 0.968601 0.732821 0 0 0 0 4.02553 14.6073 0 t 0 0 0 0 0 10.1912 0.791969 61.0204 0.879813 0 98.5685 10.8053 0 0 4.51972 22.9094 0

M05397_2.00_rc_shift5 (HOXA10,HOXC6_rc)
; positions_6nt_m4 versus M05397_2.00_rc (HOXA10,HOXC6_rc); m=37/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.727978; -----gGymATAAAAc- ; cor=; Ncor= a 0 0 0 0 0 21.045 6.6766 0 66.0948 99.4622 5.32423 83.0042 98.8596 99.3553 73.5419 24.297 0 c 0 0 0 0 0 18.1261 6.05067 40.1512 31.6893 0 0 0.179533 0 0.644699 10.6045 37.0584 0 g 0 0 0 0 0 48.8649 82.6826 0.10803 0.476531 0.537827 0 0.867744 0.0712758 0 5.27572 13.951 0 t 0 0 0 0 0 11.964 4.59016 59.7407 1.73934 0 94.6758 15.9485 1.06914 0 10.5779 24.6936 0

M03196_2.00_rc_shift6 (CDX2_rc)
; positions_6nt_m4 versus M03196_2.00_rc (CDX2_rc); m=38/257; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.724761; ------gymATAAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 23.0595 3.59152 52.8683 90.4723 1.19469 92.4465 93.1107 92.3303 55.9437 0 0 c 0 0 0 0 0 0 18.4748 51.1034 38.052 0.533881 1.0177 0.96517 0 1.96982 20.6443 0 0 g 0 0 0 0 0 0 53.8357 1.08178 1.11432 8.9117 0.309735 0.125892 0.845309 2.13747 10.2541 0 0 t 0 0 0 0 0 0 4.63005 44.2233 7.96533 0.0821355 97.4779 6.46244 6.04396 3.56245 13.1579 0 0

M04983_2.00_rc_shift5 (HOXA13_rc)
; positions_6nt_m4 versus M04983_2.00_rc (HOXA13_rc); m=39/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.724119; -----rcCAATAAAmy- ; cor=; Ncor= a 0 0 0 0 0 31.8367 18.2519 0 73.1343 92.1053 0 83.6177 100 98 62.6598 17.551 0 c 0 0 0 0 0 22.8571 62.982 75.6173 8.65672 7.89474 0 0 0 2 25.8312 40.8163 0 g 0 0 0 0 0 26.5306 17.4807 0 0 0 0 0 0 0 7.92839 10.6122 0 t 0 0 0 0 0 18.7755 1.28535 24.3827 18.209 0 100 16.3823 0 0 3.58056 31.0204 0

M05083_2.00_shift5 (HOXC12)
; positions_6nt_m4 versus M05083_2.00 (HOXC12); m=40/257; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.720746; -----gGYAATAAAay- ; cor=; Ncor= a 0 0 0 0 0 20.4905 12.6547 0 72.209 86.4865 0 82.7211 100 99.0228 67.6307 23.3553 0 c 0 0 0 0 0 15.5063 3.71389 26.2136 21.1401 0 0.490998 1.08844 0 0.977199 10.2336 31.25 0 g 0 0 0 0 0 48.1013 83.6314 0 5.70071 13.5135 0 0 0 0 8.45384 13.9803 0 t 0 0 0 0 0 15.9019 0 73.7864 0.950119 0 99.509 16.1905 0 0 13.6819 31.4145 0

M05341_2.00_rc_shift5 (HOXC10,HOXC6_rc)
; positions_6nt_m4 versus M05341_2.00_rc (HOXC10,HOXC6_rc); m=41/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.718135; -----rGymATAAAAc- ; cor=; Ncor= a 0 0 0 0 0 28.4666 0 0 67.4123 100 4.503 94.1467 99.6173 100 95.5289 19.4969 0 c 0 0 0 0 0 12.2599 0 46.1753 32.5877 0 0 0 0.208768 0 1.66834 45.5276 0 g 0 0 0 0 0 46.1404 100 0 0 0 0 0 0.173974 0 0 11.4605 0 t 0 0 0 0 0 13.1331 0 53.8247 0 0 95.497 5.85334 0 0 2.8028 23.515 0

M05339_2.00_rc_shift5 (HOXC10,HOXC6_rc)
; positions_6nt_m4 versus M05339_2.00_rc (HOXC10,HOXC6_rc); m=42/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.717794; -----gGymATAAAAy- ; cor=; Ncor= a 0 0 0 0 0 22.6127 5.74952 0 63.9614 99.3696 1.03513 88.3101 100 100 78.5666 21.8107 0 c 0 0 0 0 0 15.0351 0.256246 46.2963 36.0386 0 0 0 0 0 9.26849 38.4259 0 g 0 0 0 0 0 46.4255 93.4017 0 0 0.630431 0 0 0 0 4.27051 13.9918 0 t 0 0 0 0 0 15.9266 0.592569 53.7037 0 0 98.9649 11.6899 0 0 7.89438 25.7716 0

M03134_2.00_rc_shift5 (HOXC11_rc)
; positions_6nt_m4 versus M03134_2.00_rc (HOXC11_rc); m=43/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.71633; -----rgymATAAAam- ; cor=; Ncor= a 0 0 0 0 0 37.6102 17.3513 1.68067 46.2619 83.0757 7.16814 73.4675 91.8165 90.1943 66.3849 37.3777 0 c 0 0 0 0 0 13.4182 15.0828 57.8898 42.9089 0.895037 0 5.3065 0 6.00707 14.0442 26.0274 0 g 0 0 0 0 0 32.9089 62.5996 2.98786 7.65745 9.03173 2.47788 1.18939 0.44964 0 5.0065 17.319 0 t 0 0 0 0 0 16.0627 4.96628 37.4416 3.17173 6.99756 90.354 20.0366 7.73381 3.79859 14.5644 19.2759 0

M05337_2.00_rc_shift5 (HOXC10,HOXC6_rc)
; positions_6nt_m4 versus M05337_2.00_rc (HOXC10,HOXC6_rc); m=44/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.715766; -----gGymATAAAAc- ; cor=; Ncor= a 0 0 0 0 0 19.8486 7.35184 0 60.3247 100 2.13992 90.6941 99.3317 99.8321 75.6843 18.587 0 c 0 0 0 0 0 21.9512 1.80045 45.8754 39.5231 0 0 0 0.668338 0 13.4309 40.286 0 g 0 0 0 0 0 43.9024 89.1973 0 0.152207 0 0 0 0 0.167926 3.50095 20.6056 0 t 0 0 0 0 0 14.2977 1.65041 54.1246 0 0 97.8601 9.30587 0 0 7.38383 20.5214 0

M09433_2.00_shift7 (TBPL2)
; positions_6nt_m4 versus M09433_2.00 (TBPL2); m=45/257; ncol2=10; w=0; offset=1; strand=D; shift=7; score=0.713382; -------sTATAAAArs ; cor=; Ncor= a 0 0 0 0 0 0 0 16.4 13.4 76.8 3.6 91.4 85.2 94.6 76.2 40.8 11.4 c 0 0 0 0 0 0 0 50.4 11.4 1.6 4.4 3 1.8 0 0.6 1.8 37 g 0 0 0 0 0 0 0 27.4 4.8 2.4 10.2 3.6 1 5 7.2 53.8 43 t 0 0 0 0 0 0 0 5.8 70.4 19.2 81.8 2 12 0.4 16 3.6 8.6

M03115_2.00_rc_shift6 (CDX1_rc)
; positions_6nt_m4 versus M03115_2.00_rc (CDX1_rc); m=46/257; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.711747; ------gymATAAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 24.1104 3.01607 51.1102 90.5753 0.300623 83.257 90.3634 86.9084 50.1402 0 0 c 0 0 0 0 0 0 16.7889 53.6736 38.8151 1.30872 0.128838 2.69324 0.721037 4.59188 18.8376 0 0 g 0 0 0 0 0 0 52.9545 0.198288 1.9296 7.3933 0 1.00548 0.760012 2.39903 13.554 0 0 t 0 0 0 0 0 0 6.14622 43.1121 8.14506 0.722727 99.5705 13.0443 8.15551 6.10065 17.4682 0 0

M03773_2.00_rc_shift5 (HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M03773_2.00_rc (HOXC5,HOXC6_rc); m=47/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.711239; -----rGymATAAAAm- ; cor=; Ncor= a 0 0 0 0 0 43.5344 8.4259 0 55.9181 95.4386 0.691069 76.9416 99.2712 97.0896 74.5341 32.1098 0 c 0 0 0 0 0 9.31406 3.73973 55.9107 36.6758 1.26259 0 0 0 2.05657 10.6868 34.5186 0 g 0 0 0 0 0 35.5433 85.9481 0 1.68477 3.06525 0 0.517769 0 0.215309 4.33172 9.27583 0 t 0 0 0 0 0 11.6082 1.8863 44.0893 5.72137 0.233543 99.3089 22.5406 0.728763 0.638503 10.4474 24.0957 0

M05072_2.00_rc_shift5 (HOXC13_rc)
; positions_6nt_m4 versus M05072_2.00_rc (HOXC13_rc); m=48/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.705976; -----vsCmATAAAac- ; cor=; Ncor= a 0 0 0 0 0 25.2271 6.89233 0 66.8537 100 0 99.1678 100 100 64.1256 6.78322 0 c 0 0 0 0 0 31.4465 58.3197 86.9301 25.9 0 0 0.832178 0 0 23.1839 58.1119 0 g 0 0 0 0 0 30.6778 28.4666 0 0.233754 0 0 0 0 0 3.5426 13.6364 0 t 0 0 0 0 0 12.6485 6.32137 13.0699 7.01262 0 100 0 0 0 9.14798 21.4685 0

M05078_2.00_rc_shift5 (HOXC11_rc)
; positions_6nt_m4 versus M05078_2.00_rc (HOXC11_rc); m=49/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.70484; -----rgymATAAAam- ; cor=; Ncor= a 0 0 0 0 0 32.6068 14.0663 0 44.0869 91.452 0 75.0962 99.2376 96.5389 62.48 26.7136 0 c 0 0 0 0 0 13.993 15.8044 47.7927 48.6311 0.87822 0 1.25 0 2.47219 15.28 37.476 0 g 0 0 0 0 0 35.4839 63.1366 0 1.35478 7.37705 0 0 0.508259 0.123609 5.4 14.8623 0 t 0 0 0 0 0 17.9163 6.99272 52.2073 5.92718 0.29274 100 23.6538 0.25413 0.865266 16.84 20.9481 0

M03209_2.00_rc_shift6 (HOXD12_rc)
; positions_6nt_m4 versus M03209_2.00_rc (HOXD12_rc); m=50/257; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.704795; ------GyrATWAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 12.7279 3.31256 60.4093 87.2114 8.31376 68.6161 93.84 90.9047 58.1947 0 0 c 0 0 0 0 0 0 13.9933 34.2079 12.7598 3.73961 0.892438 1.6709 0.496771 4.5717 15.2187 0 0 g 0 0 0 0 0 0 70.3015 0.524762 26.8308 7.84857 2.0667 3.55975 0 1.49182 12.2304 0 0 t 0 0 0 0 0 0 2.9773 61.9547 0 1.20037 88.7271 26.1533 5.66319 3.03176 14.3561 0 0

M05201_2.00_rc_shift5 (HOXB13_rc)
; positions_6nt_m4 versus M05201_2.00_rc (HOXB13_rc); m=51/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.701123; -----cCCmATAAAAc- ; cor=; Ncor= a 0 0 0 0 0 21.972 4.75647 0.807409 63.2717 99.3572 0 98.4709 99.9224 99.8708 74.5946 16.8219 0 c 0 0 0 0 0 44.7723 73.516 91.7597 27.493 0 0 0 0 0 15.0965 52.3551 0 g 0 0 0 0 0 20.0828 16.0769 0 0.294744 0.411417 0 0 0 0.129232 3.35907 8.46273 0 t 0 0 0 0 0 13.1729 5.65068 7.43291 8.94056 0.231422 100 1.52905 0.0775795 0 6.94981 22.3602 0

M07551_2.00_rc_shift5 (CTCF_rc)
; positions_6nt_m4 versus M07551_2.00_rc (CTCF_rc); m=52/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.699943; -----AAAAAyAAAAR- ; cor=; Ncor= a 0 0 0 0 0 100 100 100 73.6842 94.7368 15.7895 100 78.9474 100 84.2105 68.4211 0 c 0 0 0 0 0 0 0 0 10.5263 0 26.3158 0 15.7895 0 10.5263 0 0 g 0 0 0 0 0 0 0 0 10.5263 5.2632 5.2632 0 0 0 0 31.5789 0 t 0 0 0 0 0 0 0 0 5.2632 0 52.6316 0 5.2632 0 5.2632 0 0

M11389_2.00_shift6 (TBP,TBPL2)
; positions_6nt_m4 versus M11389_2.00 (TBP,TBPL2); m=53/257; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.699943; ------yCTWTAAAAr- ; cor=; Ncor= a 0 0 0 0 0 0 22.4551 0 2.46821 72.9993 0 100 92.8144 100 100 29.3413 0 c 0 0 0 0 0 0 29.1168 76.2154 24.9065 0 0 0 0 0 0 10.1796 0 g 0 0 0 0 0 0 18.5629 19.8953 0 0 0 0 0 0 0 45.7335 0 t 0 0 0 0 0 0 29.8653 3.8893 72.6253 27.0007 100 0 7.18563 0 0 14.7455 0

M04900_2.00_rc_shift5 (HOXA11_rc)
; positions_6nt_m4 versus M04900_2.00_rc (HOXA11_rc); m=54/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.698236; -----rGymATAAAay- ; cor=; Ncor= a 0 0 0 0 0 34.1365 3.94737 0 49.2754 86.7347 0 80.1887 97.1429 93.9227 60.9319 20.5882 0 c 0 0 0 0 0 12.0482 13.5965 50 44.6377 0 0 0 0 2.20994 8.96057 30.5882 0 g 0 0 0 0 0 34.1365 74.5614 0 3.47826 10.7143 0 0 0 0 17.5627 11.7647 0 t 0 0 0 0 0 19.6787 7.89474 50 2.6087 2.55102 100 19.8113 2.85714 3.8674 12.5448 37.0588 0

M03581_2.00_shift8 (CPEB1)
; positions_6nt_m4 versus M03581_2.00 (CPEB1); m=55/257; ncol2=8; w=0; offset=2; strand=D; shift=8; score=0.697681; --------aATAAAAa- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 52.5709 82.7471 0.557007 98.1526 94.9235 93.8347 99.42 51.6227 0 c 0 0 0 0 0 0 0 0 5.13649 1.33908 0 0 0 0.104275 0 9.00192 0 g 0 0 0 0 0 0 0 0 24.9502 13.7299 0.433228 1.26116 0.599947 3.30422 0.58003 24.9787 0 t 0 0 0 0 0 0 0 0 17.3424 2.18391 99.0098 0.58627 4.47653 2.75678 0 14.3967 0

M05335_2.00_rc_shift5 (HOXC10,HOXC6_rc)
; positions_6nt_m4 versus M05335_2.00_rc (HOXC10,HOXC6_rc); m=56/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.695901; -----gGymATAAAac- ; cor=; Ncor= a 0 0 0 0 0 18.8 13.1285 0 50 88.968 0 77.2201 100 95.8773 56.4334 16.9 0 c 0 0 0 0 0 23.9 10.6145 58.8412 43.95 3.73665 0 0.15444 0 3.54746 19.6953 43.8 0 g 0 0 0 0 0 40.3 69.8324 0 2.65 5.78292 0 0.15444 0 0.575264 10.4966 17.5 0 t 0 0 0 0 0 17 6.42458 41.1588 3.4 1.51246 100 22.471 0 0 13.3747 21.8 0

M08420_2.00_rc_shift5 (M08420_2.00_rc)
; positions_6nt_m4 versus M08420_2.00_rc; m=57/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.69552; -----rgymATAAAAm- ; cor=; Ncor= a 0 0 0 0 0 37.0821 24.9674 0 32.3491 91.9236 0 97.0908 100 100 71.0812 45.419 0 c 0 0 0 0 0 0 14.8068 64.3074 64.0469 0 4.12505 0 0 0 4.99349 32.7833 0 g 0 0 0 0 0 49.6309 60.2258 0 0 8.07642 0 0 0 0 6.38298 0 0 t 0 0 0 0 0 13.287 0 35.6926 3.60399 0 95.8749 2.90925 0 0 17.5423 21.7977 0

M05129_2.00_rc_shift5 (CDX4_rc)
; positions_6nt_m4 versus M05129_2.00_rc (CDX4_rc); m=58/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.694711; -----gGymATAAAac- ; cor=; Ncor= a 0 0 0 0 0 15.8899 9.35999 0 52.9731 100 0 100 100 99.7567 63.4025 11.6185 0 c 0 0 0 0 0 9.53909 3.93171 62.8295 46.92 0 0 0 0 0.24334 17.6177 49.0157 0 g 0 0 0 0 0 52.0221 86.3462 0 0.10687 0 0 0 0 0 5.88251 16.0818 0 t 0 0 0 0 0 22.5489 0.362131 37.1705 0 0 100 0 0 0 13.0973 23.284 0

M04977_2.00_rc_shift5 (HOXA13_rc)
; positions_6nt_m4 versus M04977_2.00_rc (HOXA13_rc); m=59/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.692259; -----vCCMATAAAAc- ; cor=; Ncor= a 0 0 0 0 0 30.8499 4.95673 0 70.7715 100 0 98.2492 99.8953 100 72.4374 15.68 0 c 0 0 0 0 0 36.8311 75.059 94.6429 29.2285 0 0 0 0 0 18.6029 60.64 0 g 0 0 0 0 0 30.4302 19.9843 0 0 0 0 1.75077 0.104712 0 2.73349 8.16 0 t 0 0 0 0 0 1.88877 0 5.35714 0 0 100 0 0 0 6.22627 15.52 0

M05076_2.00_rc_shift5 (HOXC11_rc)
; positions_6nt_m4 versus M05076_2.00_rc (HOXC11_rc); m=60/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.691828; -----rGymATWAAah- ; cor=; Ncor= a 0 0 0 0 0 30.2594 12.2415 0 44.0268 85.3491 0 73.2003 99.5993 97.9851 63.1921 26.2852 0 c 0 0 0 0 0 11.8156 10.8072 46.5802 47.963 2.82335 0.0893256 0.719895 0 0.175208 12.5141 32.4989 0 g 0 0 0 0 0 41.3705 74.6164 0 3.32612 11.8275 0 0 0 0 7.23164 16.1824 0 t 0 0 0 0 0 16.5546 2.33489 53.4198 4.68412 0 99.9107 26.0798 0.400712 1.83968 17.0621 25.0335 0

M08090_2.00_rc_shift5 (ZNF384_rc)
; positions_6nt_m4 versus M08090_2.00_rc (ZNF384_rc); m=61/257; ncol2=12; w=-1; offset=-1; strand=R; shift=5; score=0.69127; -----wwwmAAAAAAaa ; cor=; Ncor= a 0 0 0 0 0 31.0847 29.9543 31.2884 43.1275 99.7404 99.2048 98.8138 99.4053 99.241 99.9113 66.7762 62.1562 c 0 0 0 0 0 16.2488 23.0835 11.3561 25.2719 0.0230013 0.115007 0.069004 0.0427168 0.0854336 0.0197154 9.55542 13.022 g 0 0 0 0 0 18.5654 16.8666 15.3715 15.5128 0.0427168 0.0624322 0.0854336 0.0492886 0.0460027 0 9.0921 9.52256 t 0 0 0 0 0 34.1011 30.0956 41.984 16.0878 0.193868 0.61775 1.03177 0.502744 0.627608 0.069004 14.5763 15.2992

M03275_2.00_rc_shift5 (M03275_2.00_rc)
; positions_6nt_m4 versus M03275_2.00_rc; m=62/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.690335; -----rgymATwAAah- ; cor=; Ncor= a 0 0 0 0 0 25.2475 17.3719 0 43.6285 72.2719 6.91244 58.4323 94.6136 91.8182 56.9014 28.2178 0 c 0 0 0 0 0 18.5644 23.3853 52.3342 45.0324 16.6369 0 3.32542 0 7.04545 19.2958 25.2475 0 g 0 0 0 0 0 39.604 44.9889 0.982801 8.09935 10.9123 0 0.950119 0 0.909091 10.7042 17.8218 0 t 0 0 0 0 0 16.5842 14.2539 46.683 3.23974 0.178891 93.0876 37.2922 5.38642 0.227273 13.0986 28.7129 0

M05080_2.00_rc_shift5 (HOXC11_rc)
; positions_6nt_m4 versus M05080_2.00_rc (HOXC11_rc); m=63/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.683885; -----rgymATwAAam- ; cor=; Ncor= a 0 0 0 0 0 28.7001 11.8873 2.21811 41.5228 78.7202 0 67.2173 95.8333 95.3153 58.5825 26.9811 0 c 0 0 0 0 0 14.6718 16.6667 59.7043 48.2732 6.84524 0 4.7014 0 0.900901 17.165 34.3396 0 g 0 0 0 0 0 39.3822 64.8284 0.184843 4.23862 13.9881 0.56391 0 0.181159 2.16216 6.97674 16.9811 0 t 0 0 0 0 0 17.2458 6.61765 37.8928 5.96546 0.446429 99.4361 28.0813 3.98551 1.62162 17.2757 21.6981 0

M05401_2.00_rc_shift5 (HOXA10,HOXC6_rc)
; positions_6nt_m4 versus M05401_2.00_rc (HOXA10,HOXC6_rc); m=64/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.683719; -----sgymATWAAay- ; cor=; Ncor= a 0 0 0 0 0 16.0587 15.9703 0 51.6077 88.7441 1.01322 68.2979 95.3331 89.3795 42.126 16.4146 0 c 0 0 0 0 0 26.7349 13.359 51.0458 40.0092 2.48815 0 0.668693 0.466695 6.88146 24.2782 38.2117 0 g 0 0 0 0 0 34.4751 61.7647 0 3.55994 8.76777 0 1.00304 0 0 16.5917 20.0623 0 t 0 0 0 0 0 22.7313 8.90599 48.9542 4.82315 0 98.9868 30.0304 4.20025 3.73906 17.0041 25.3114 0

M04898_2.00_rc_shift5 (HOXA11_rc)
; positions_6nt_m4 versus M04898_2.00_rc (HOXA11_rc); m=65/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.683282; -----rgymATaAAah- ; cor=; Ncor= a 0 0 0 0 0 26.5446 10.8647 1.67224 42.0144 74.6803 0 66.8192 96.0526 91.25 57.0312 25.256 0 c 0 0 0 0 0 15.5606 18.1818 49.8328 45.7554 4.85934 0 4.11899 0.657895 7.5 13.8672 33.7884 0 g 0 0 0 0 0 40.5034 64.745 0.334448 7.76978 18.4143 0 4.11899 0 0 10.1562 9.21502 0 t 0 0 0 0 0 17.3913 6.20843 48.1605 4.46043 2.04604 100 24.9428 3.28947 1.25 18.9453 31.7406 0

M00298_2.00_rc_shift6 (HOXD13_rc)
; positions_6nt_m4 versus M00298_2.00_rc (HOXD13_rc); m=66/257; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.68146; ------cyhrTwAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 19.2222 16.3719 33.1819 64.2146 3.11498 60.0605 79.1532 75.984 40.5661 0 0 c 0 0 0 0 0 0 36.0918 39.8678 29.7255 2.29844 6.2728 4.32907 3.03857 8.17044 20.347 0 0 g 0 0 0 0 0 0 21.6729 9.44578 6.76664 28.0007 0.0332474 6.08211 5.11095 4.01695 14.4824 0 0 t 0 0 0 0 0 0 23.0131 34.3145 30.326 5.48617 90.579 29.5284 12.6973 11.8286 24.6046 0 0

M03140_2.00_rc_shift5 (HOXD11_rc)
; positions_6nt_m4 versus M03140_2.00_rc (HOXD11_rc); m=67/257; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.67576; -----rrymATAAAa-- ; cor=; Ncor= a 0 0 0 0 0 32.381 26.6376 7.37705 51.9802 77.2059 6.45161 68.6275 91.3043 88.9831 64.0244 0 0 c 0 0 0 0 0 5.71429 17.4672 38.5246 39.604 5.88235 5.64516 3.92157 0.869565 2.54237 13.4146 0 0 g 0 0 0 0 0 41.9048 45.8515 6.55738 5.44554 11.0294 3.22581 2.61438 5.21739 4.23729 12.8049 0 0 t 0 0 0 0 0 20 10.0437 47.541 2.9703 5.88235 84.6774 24.8366 2.6087 4.23729 9.7561 0 0

M05399_2.00_rc_shift5 (HOXA10,HOXC6_rc)
; positions_6nt_m4 versus M05399_2.00_rc (HOXA10,HOXC6_rc); m=68/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.675063; -----gGymATWAAac- ; cor=; Ncor= a 0 0 0 0 0 20.9528 14.7386 0.0462107 53.1972 85.4941 0 71.7175 95.2863 86.6239 41.8213 20.1572 0 c 0 0 0 0 0 22.2942 8.39869 55.037 39.4245 1.3834 0 1.2931 0 7.60913 21.3457 41.1003 0 g 0 0 0 0 0 38.3904 70.6863 0 6.02558 13.083 0 0.132626 0 0 19.9149 18.4004 0 t 0 0 0 0 0 18.3626 6.17647 44.9168 1.35268 0.0395257 100 26.8568 4.71366 5.76692 16.918 20.3421 0

M05131_2.00_rc_shift5 (CDX4_rc)
; positions_6nt_m4 versus M05131_2.00_rc (CDX4_rc); m=69/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.673158; -----kGCmATAAAac- ; cor=; Ncor= a 0 0 0 0 0 13.5135 2.36453 0 51.5252 100 0 98.4791 96.2825 97.125 54.1086 9.90991 0 c 0 0 0 0 0 19.8198 19.9015 80.0515 44.0981 0 0 1.52091 0 2 23.1894 55.3411 0 g 0 0 0 0 0 41.3127 76.5517 0 0.132626 0 0 0 0 0 10.585 17.6319 0 t 0 0 0 0 0 25.3539 1.18227 19.9485 4.24403 0 100 0 3.71747 0.875 12.117 17.1171 0

M01660_2.00_shift7 (ARID3B,ARID3C)
; positions_6nt_m4 versus M01660_2.00 (ARID3B,ARID3C); m=70/257; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.669386; -------wwATyAAaw- ; cor=; Ncor= a 0 0 0 0 0 0 0 26.9597 34.5989 98.0846 0.979404 24.5593 78.6967 73.3314 55.7268 36.5112 0 c 0 0 0 0 0 0 0 19.9722 9.24259 0.0894416 1.32206 30.6027 6.02309 7.13484 7.69416 21.0651 0 g 0 0 0 0 0 0 0 22.9735 23.8987 1.74339 1.23268 3.93964 8.21204 7.65217 14.5918 13.703 0 t 0 0 0 0 0 0 0 30.0945 32.2598 0.082565 96.4659 40.8983 7.06817 11.8816 21.9872 28.7207 0

M01656_2.00_shift7 (ARID3B,ARID3C)
; positions_6nt_m4 versus M01656_2.00 (ARID3B,ARID3C); m=71/257; ncol2=10; w=0; offset=1; strand=D; shift=7; score=0.668403; -------ywATyaaaww ; cor=; Ncor= a 0 0 0 0 0 0 0 20.5322 35.1607 81.973 6.90595 18.7905 59.7258 47.2036 41.2054 27.8116 25.7464 c 0 0 0 0 0 0 0 26.3638 13.7347 7.89626 0.49777 37.8394 7.53655 15.5564 16.096 23.9377 23.0645 g 0 0 0 0 0 0 0 24.8285 24.5308 5.62033 3.26214 9.8095 16.9415 21.2099 22.8413 22.3193 22.1601 t 0 0 0 0 0 0 0 28.2754 26.5739 4.51042 89.3341 33.5606 15.7961 16.0301 19.8573 25.9314 29.029

M00115_2.00_shift7 (ARID3B,ARID3C)
; positions_6nt_m4 versus M00115_2.00 (ARID3B,ARID3C); m=72/257; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.663935; -------ywATyAaaw- ; cor=; Ncor= a 0 0 0 0 0 0 0 24.6578 37.8326 93.2211 10.9459 19.8441 70.8755 60.7308 51.9306 34.7377 0 c 0 0 0 0 0 0 0 26.7115 8.9636 2.00366 5.71426 33.3784 5.64588 10.0387 10.8039 20.2433 0 g 0 0 0 0 0 0 0 23.2219 24.6105 2.44727 9.42122 11.3351 13.8866 14.1039 18.7259 18.501 0 t 0 0 0 0 0 0 0 25.4088 28.5933 2.32792 73.9186 35.4424 9.59196 15.1265 18.5396 26.518 0

M09084_2.00_shift6 (FOXI2,FOXI3,FOXJ2)
; positions_6nt_m4 versus M09084_2.00 (FOXI2,FOXI3,FOXJ2); m=73/257; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.661787; ------wAaAyAAAyA- ; cor=; Ncor= a 0 0 0 0 0 0 32.058 73.8786 66.4908 80.7388 0 100 100 97.6253 4.74934 97.6253 0 c 0 0 0 0 0 0 13.0607 23.7467 0 0 45.1187 0 0 2.37467 64.3799 0 0 g 0 0 0 0 0 0 8.31135 2.37467 21.6359 19.2612 0 0 0 0 0 2.37467 0 t 0 0 0 0 0 0 46.5699 0 11.8734 0 54.8813 0 0 0 30.8707 0 0

M09100_2.00_shift6 (FOXI2,FOXI3)
; positions_6nt_m4 versus M09100_2.00 (FOXI2,FOXI3); m=74/257; ncol2=10; w=0; offset=0; strand=D; shift=6; score=0.661787; ------wAaAyAAAyA- ; cor=; Ncor= a 0 0 0 0 0 0 32.058 73.8786 66.4908 80.7388 0 100 100 97.6253 4.74934 97.6253 0 c 0 0 0 0 0 0 13.0607 23.7467 0 0 45.1187 0 0 2.37467 64.3799 0 0 g 0 0 0 0 0 0 8.31135 2.37467 21.6359 19.2612 0 0 0 0 0 2.37467 0 t 0 0 0 0 0 0 46.5699 0 11.8734 0 54.8813 0 0 0 30.8707 0 0

M02081_2.00_rc_shift7 (M02081_2.00_rc)
; positions_6nt_m4 versus M02081_2.00_rc; m=75/257; ncol2=8; w=0; offset=1; strand=R; shift=7; score=0.661306; -------ymATAAAw-- ; cor=; Ncor= a 0 0 0 0 0 0 0 8.41741 56.0196 75.7832 1.91671 87.2453 93.6131 93.0367 55.7574 0 0 c 0 0 0 0 0 0 0 29.9047 25.5318 1.27993 1.27993 0.0063678 0.0063678 0.701194 13.466 0 0 g 0 0 0 0 0 0 0 0.943572 0.00709019 9.55807 0.0063678 0.643148 1.27993 1.39545 4.81546 0 0 t 0 0 0 0 0 0 0 60.7343 18.4416 13.3788 96.797 12.1052 5.10061 4.8667 25.9612 0 0

M01658_2.00_shift7 (ARID3B,ARID3C)
; positions_6nt_m4 versus M01658_2.00 (ARID3B,ARID3C); m=76/257; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.659362; -------twAThAaaw- ; cor=; Ncor= a 0 0 0 0 0 0 0 24.9746 36.7305 99.9306 1.14163 26.0879 72.5817 63.6466 48.9639 31.0029 0 c 0 0 0 0 0 0 0 22.825 11.5145 0.0100969 1.06445 31.2329 5.6673 10.2098 10.709 22.5127 0 g 0 0 0 0 0 0 0 22.5979 22.2782 0.0207435 1.01253 4.91097 10.2237 12.2233 17.6561 18.4318 0 t 0 0 0 0 0 0 0 29.6025 29.4769 0.0385606 96.7814 37.7683 11.5272 13.9203 22.6709 28.0526 0

M00394_2.00_rc_shift6 (M00394_2.00_rc)
; positions_6nt_m4 versus M00394_2.00_rc; m=77/257; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.658064; ------cymrtaAaw-- ; cor=; Ncor= a 0 0 0 0 0 0 20.9474 16.1811 29.3897 46.8319 10.3931 51.8823 69.4873 63.7168 36.6209 0 0 c 0 0 0 0 0 0 37.4129 31.9395 34.8357 9.93997 14.8967 10.4749 4.76427 11.64 20.71 0 0 g 0 0 0 0 0 0 24.8291 12.4764 11.7123 32.6735 13.0807 13.8596 11.1467 8.45238 15.8096 0 0 t 0 0 0 0 0 0 16.8107 39.403 24.0622 10.5546 61.6295 23.7832 14.6018 16.1909 26.8595 0 0

M09149_2.00_rc_shift5 (HOXB13_rc)
; positions_6nt_m4 versus M09149_2.00_rc (HOXB13_rc); m=78/257; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.657951; -----rsyhATAAAA-- ; cor=; Ncor= a 0 0 0 0 0 25.6 6.8 8.6 40.4 87.4 0 93.6 99.4 96.6 72.4 0 0 c 0 0 0 0 0 16.8 50 65.6 32.4 0.2 3.4 2.6 0.2 1.8 10 0 0 g 0 0 0 0 0 38.4 33 0.8 1 10 2.2 2.4 0.4 0.6 10.8 0 0 t 0 0 0 0 0 19.2 10.2 25 26.2 2.4 94.4 1.4 0 1 6.8 0 0

M00300_2.00_rc_shift7 (HOXD13_rc)
; positions_6nt_m4 versus M00300_2.00_rc (HOXD13_rc); m=79/257; ncol2=8; w=0; offset=1; strand=R; shift=7; score=0.656573; -------yaATAAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 0 5.66767 56.925 72.5366 1.95404 85.0493 94.7871 91.6482 59.3923 0 0 c 0 0 0 0 0 0 0 27.3576 24.8176 0.659958 0.655674 0.00649182 0.00649182 1.39545 11.8864 0 0 g 0 0 0 0 0 0 0 0.0094304 0.00729714 16.3421 0.00649182 0.655674 0.00649182 1.39545 7.92755 0 0 t 0 0 0 0 0 0 0 66.9653 18.2501 10.4613 97.3838 14.2885 5.19995 5.56096 20.7937 0 0

M00295_2.00_rc_shift6 (HOXD13_rc)
; positions_6nt_m4 versus M00295_2.00_rc (HOXD13_rc); m=80/257; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.65445; ------syhrTwAaa-- ; cor=; Ncor= a 0 0 0 0 0 0 22.0709 14.9918 31.8881 54.975 3.48303 55.5205 74.4062 65.4176 36.2227 0 0 c 0 0 0 0 0 0 36.0267 35.7842 32.8592 4.74399 9.09663 6.46726 3.12533 12.0708 21.9702 0 0 g 0 0 0 0 0 0 25.3876 10.4594 8.34976 33.344 1.11394 10.9874 6.35689 7.62011 17.2823 0 0 t 0 0 0 0 0 0 16.5148 38.7645 26.9029 6.93706 86.3064 27.0247 16.1116 14.8915 24.5248 0 0

M01245_2.00_rc_shift5 (HOXC6_rc)
; positions_6nt_m4 versus M01245_2.00_rc (HOXC6_rc); m=81/257; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.654216; -----rrymATwAaa-- ; cor=; Ncor= a 0 0 0 0 0 29.3248 25.0798 14.0728 46.7929 76.0399 5.28815 55.7886 75.9063 67.0431 47.4445 0 0 c 0 0 0 0 0 17.089 20.5336 32.5978 32.9744 6.89819 6.65566 5.26757 4.80424 11.8857 16.4374 0 0 g 0 0 0 0 0 33.7316 38.5541 6.13644 8.80862 14.1719 2.81642 4.76629 5.00031 5.96158 15.6358 0 0 t 0 0 0 0 0 19.8546 15.8325 47.193 11.4242 2.89001 85.2398 34.1776 14.2891 15.1097 20.4823 0 0

M05018_2.00_rc_shift5 (CDX1_rc)
; positions_6nt_m4 versus M05018_2.00_rc (CDX1_rc); m=82/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.653637; -----gGYmATAAAac- ; cor=; Ncor= a 0 0 0 0 0 17.0851 8.8375 0 37.9113 100 0 99.9474 100 99.9001 60.7353 9.38043 0 c 0 0 0 0 0 13.0059 0 70.2284 61.9416 0 0 0 0 0 23.0946 56.2878 0 g 0 0 0 0 0 46.234 91.1481 0.00526371 0.147167 0 0 0.0526094 0 0.0999106 5.39322 14.1759 0 t 0 0 0 0 0 23.6749 0.0143933 29.7663 0 0 100 0 0 0 10.7769 20.1558 0

M05122_2.00_rc_shift5 (HOXD13_rc)
; positions_6nt_m4 versus M05122_2.00_rc (HOXD13_rc); m=83/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.653096; -----ssCMATAAAmC- ; cor=; Ncor= a 0 0 0 0 0 12.2283 8.53018 0 72.4409 98.6595 1.60428 100 96.8421 83.4467 58.4127 16.3043 0 c 0 0 0 0 0 49.4565 48.294 100 27.5591 0 0 0 0 16.5533 39.5238 82.337 0 g 0 0 0 0 0 35.0543 43.1759 0 0 1.34048 0 0 3.15789 0 2.06349 0.815217 0 t 0 0 0 0 0 3.26087 0 0 0 0 98.3957 0 0 0 0 0.543478 0

M01680_2.00_shift6 (M01680_2.00)
; positions_6nt_m4 versus M01680_2.00; m=84/257; ncol2=8; w=0; offset=0; strand=D; shift=6; score=0.652745; ------AAAATAAA--- ; cor=; Ncor= a 0 0 0 0 0 0 99.0132 99.2574 99.2574 99.2574 25 99.2574 99.2574 99.0132 0 0 0 c 0 0 0 0 0 0 0.328947 0.247525 0.247525 0.247525 0.247525 0.247525 0.247525 0.328947 0 0 0 g 0 0 0 0 0 0 0.328947 0.247525 0.247525 0.247525 0.247525 0.247525 0.247525 0.328947 0 0 0 t 0 0 0 0 0 0 0.328947 0.247525 0.247525 0.247525 74.505 0.247525 0.247525 0.328947 0 0 0

M00299_2.00_rc_shift6 (HOXD13_rc)
; positions_6nt_m4 versus M00299_2.00_rc (HOXD13_rc); m=85/257; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.651166; ------syhrTwAaa-- ; cor=; Ncor= a 0 0 0 0 0 0 21.8939 14.6424 31.4466 53.0003 5.01695 55.227 74.4324 66.2348 36.427 0 0 c 0 0 0 0 0 0 36.097 36.3765 32.73 5.42109 9.80432 6.62898 2.80076 12.2216 21.8742 0 0 g 0 0 0 0 0 0 25.951 10.7394 8.48494 34.4772 0.164117 11.2622 6.48759 6.91164 17.0357 0 0 t 0 0 0 0 0 0 16.058 38.2416 27.3384 7.10144 85.0146 26.8819 16.2793 14.6319 24.6631 0 0

M03282_2.00_rc_shift6 (HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M03282_2.00_rc (HOXC5,HOXC6_rc); m=86/257; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.650167; ------scmATwAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 14.9888 23.1231 32.4675 71.6312 0 58.5507 81.4516 81.4516 66.8317 0 0 c 0 0 0 0 0 0 45.1902 60.6607 65.5844 0 6.48148 8.69565 14.1129 4.43548 14.3564 0 0 g 0 0 0 0 0 0 33.1096 0 1.94805 18.7943 0 0 0 0 15.3465 0 0 t 0 0 0 0 0 0 6.71141 16.2162 0 9.57447 93.5185 32.7536 4.43548 14.1129 3.46535 0 0

M07646_2.00_rc_shift7 (ZNF613_rc)
; positions_6nt_m4 versus M07646_2.00_rc (ZNF613_rc); m=87/257; ncol2=9; w=0; offset=1; strand=R; shift=7; score=0.646866; -------WAAAAAAAk- ; cor=; Ncor= a 0 0 0 0 0 0 0 74.5082 99.7541 96.1475 90.5738 97.7869 78.1148 94.5082 82.7049 9.91803 0 c 0 0 0 0 0 0 0 0.0819672 0.0819672 0.0819672 0.0819672 0.0819672 21.7213 0.0819672 0.0819672 18.1148 0 g 0 0 0 0 0 0 0 0.0819672 0.0819672 0.0819672 5.65574 2.04918 0.0819672 1.06557 7.95082 42.377 0 t 0 0 0 0 0 0 0 25.3279 0.0819672 3.68852 3.68852 0.0819672 0.0819672 4.34426 9.2623 29.5902 0

M03780_2.00_rc_shift4 (M03780_2.00_rc)
; positions_6nt_m4 versus M03780_2.00_rc; m=88/257; ncol2=12; w=-2; offset=-2; strand=R; shift=4; score=0.646493; ----rrGymATAAAac- ; cor=; Ncor= a 0 0 0 0 33.9388 32.221 9.80551 0.066211 49.8478 99.6049 0 99.7081 99.2998 98.8732 63.7915 22.8987 0 c 0 0 0 0 13.8922 8.8651 3.84263 67.8449 48.8544 0.144241 0 0 0.0125043 0.476235 16.1242 33.6429 0 g 0 0 0 0 41.3492 38.8195 83.1479 0 0.120834 0.250854 0 0 0 0.143182 6.4377 19.524 0 t 0 0 0 0 10.8197 20.0944 3.20394 32.0889 1.17695 0 100 0.29192 0.687736 0.507361 13.6467 23.9344 0

M09432_2.00_shift7 (TBP,TBPL2)
; positions_6nt_m4 versus M09432_2.00 (TBP,TBPL2); m=89/257; ncol2=10; w=0; offset=1; strand=D; shift=7; score=0.641826; -------mTATAAAars ; cor=; Ncor= a 0 0 0 0 0 0 0 28.1879 4.69799 81.2081 4.69799 85.906 71.1409 77.1812 59.7315 39.5973 7.38255 c 0 0 0 0 0 0 0 54.3624 8.72483 0 4.69799 6.04027 3.3557 2.01342 0.671141 3.3557 30.8725 g 0 0 0 0 0 0 0 15.4362 8.72483 4.69799 4.02685 4.02685 2.68456 19.4631 15.4362 49.6644 57.047 t 0 0 0 0 0 0 0 2.01342 77.8523 14.094 86.5772 4.02685 22.8188 1.34228 24.1611 7.38255 4.69799

M05082_2.00_rc_shift5 (HOXC11_rc)
; positions_6nt_m4 versus M05082_2.00_rc (HOXC11_rc); m=90/257; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.638569; -----ggymrTwAAah- ; cor=; Ncor= a 0 0 0 0 0 23.2558 9.93915 1.34228 41.8103 61.3924 0 54.1899 88.4498 80.8333 45.6829 32.5342 0 c 0 0 0 0 0 19.7674 22.1095 53.3557 47.2701 8.86076 1.02041 8.37989 0 13.3333 19.1523 26.0274 0 g 0 0 0 0 0 33.1395 59.0264 1.00671 6.89655 27.6371 0 2.7933 0 1.66667 17.1115 16.0959 0 t 0 0 0 0 0 23.8372 8.92495 44.2953 4.02299 2.1097 98.9796 34.6369 11.5502 4.16667 18.0534 25.3425 0

M00473_2.00_rc_shift6 (M00473_2.00_rc)
; positions_6nt_m4 versus M00473_2.00_rc; m=91/257; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.637181; ------cyhrTwAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 19.4856 13.1413 30.013 50.6222 8.03624 59.2412 77.9309 70.809 37.5845 0 0 c 0 0 0 0 0 0 42.0844 35.0145 38.154 3.47082 9.06083 5.82184 3.72782 10.5908 21.9023 0 0 g 0 0 0 0 0 0 24.2806 8.21337 6.7641 38.2594 1.94247 7.78047 5.96448 6.17177 16.0642 0 0 t 0 0 0 0 0 0 14.1495 43.6308 25.0689 7.64758 80.9605 27.1565 12.3768 12.4284 24.449 0 0

M01655_2.00_shift7 (ARID3B,ARID3C)
; positions_6nt_m4 versus M01655_2.00 (ARID3B,ARID3C); m=92/257; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.63598; -------ydATyAaaw- ; cor=; Ncor= a 0 0 0 0 0 0 0 19.6725 40.3679 99.9299 0.0504388 16.5827 73.2498 66.103 51.0165 33.5782 0 c 0 0 0 0 0 0 0 27.0916 8.15014 0.00950887 0.124059 37.6511 5.33279 9.31116 9.89618 22.7343 0 g 0 0 0 0 0 0 0 20.4754 25.9984 0.0187693 0.0417108 3.31468 11.9876 11.3727 17.4991 14.496 0 t 0 0 0 0 0 0 0 32.7605 25.4836 0.0417719 99.7838 42.4515 9.4298 13.2132 21.5882 29.1915 0

M06223_2.00_rc_shift7 (M06223_2.00_rc)
; positions_6nt_m4 versus M06223_2.00_rc; m=93/257; ncol2=8; w=0; offset=1; strand=R; shift=7; score=0.635232; -------yAATwAAw-- ; cor=; Ncor= a 0 0 0 0 0 0 0 2.63158 71.0526 100 0 63.1579 89.4737 76.3158 42.1053 0 0 c 0 0 0 0 0 0 0 39.4737 18.4211 0 0 5.26316 0 7.89474 10.5263 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 7.89474 15.7895 0 0 t 0 0 0 0 0 0 0 57.8947 10.5263 0 100 31.5789 10.5263 7.89474 31.5789 0 0

M00367_2.00_rc_shift5 (NR1H2,NR1H4_rc)
; positions_6nt_m4 versus M00367_2.00_rc (NR1H2,NR1H4_rc); m=94/257; ncol2=13; w=-1; offset=-1; strand=R; shift=5; score=0.635144; -----tkwtATAAtAws ; cor=; Ncor= a 0 0 0 0 0 22.5715 20.2323 39.2195 24.5374 73.073 0.0270709 99.9188 80.4586 21.9158 76.0942 25.5241 19.8486 c 0 0 0 0 0 22.5715 20.2323 10.4805 16.4668 2.43408 9.94694 0.0270709 10.1305 2.4556 14.3162 14.5466 30.8261 g 0 0 0 0 0 22.5715 29.9464 20.1946 5.17847 12.5375 0.0270709 0.0270709 0.0270709 13.4331 4.7948 14.5466 29.4767 t 0 0 0 0 0 32.2856 29.5891 30.1053 53.8173 11.9555 89.9989 0.0270709 9.38387 62.1955 4.7948 45.3828 19.8486

M03740_2.00_shift4 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI2,FOXI3,FOXS1)
; positions_6nt_m4 versus M03740_2.00 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI2,FOXI3,FOXS1); m=95/257; ncol2=13; w=-2; offset=-2; strand=D; shift=4; score=0.631729; ----wWAcAATAACAww ; cor=; Ncor= a 0 0 0 0 50.9564 72.2365 96.0684 16.0311 96.1094 96.6258 11.8504 96.4807 95.8023 1.54342 84.5272 42.2914 33.3852 c 0 0 0 0 14.7687 1.01221 0.512821 59.3218 1.13296 1.69783 8.98876 1.69528 0.958875 76.2551 1.61685 14.0823 13.4564 g 0 0 0 0 3.20285 0.449871 2.09402 18.4721 2.60795 0.580271 0.22823 0.922747 2.23737 0.932836 4.39932 10.723 12.5445 t 0 0 0 0 31.0721 26.3014 1.32479 6.17496 0.149637 1.09607 78.9326 0.901288 1.00149 21.2687 9.45666 32.9032 40.6139

M08325_2.00_rc_shift7 (ZNF22_rc)
; positions_6nt_m4 versus M08325_2.00_rc (ZNF22_rc); m=96/257; ncol2=9; w=0; offset=1; strand=R; shift=7; score=0.629808; -------AAAAAAAAA- ; cor=; Ncor= a 0 0 0 0 0 0 0 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 0 c 0 0 0 0 0 0 0 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0 g 0 0 0 0 0 0 0 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0 t 0 0 0 0 0 0 0 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0

M00410_2.00_rc_shift5 (HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M00410_2.00_rc (HOXC5,HOXC6_rc); m=97/257; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.625562; -----rgymrTwAaa-- ; cor=; Ncor= a 0 0 0 0 0 27.57 24.4406 15.758 36.7506 59.6861 9.81883 52.2927 74.3375 65.6214 42.7731 0 0 c 0 0 0 0 0 18.6665 21.0362 36.8681 38.6348 8.92716 8.2838 5.2955 6.16332 10.7392 16.8763 0 0 g 0 0 0 0 0 33.3391 41.1098 9.00111 10.9589 26.8187 7.8798 7.00663 8.92285 9.43005 16.8763 0 0 t 0 0 0 0 0 20.4244 13.4133 38.3728 13.6557 4.56811 74.0176 35.4051 10.5763 14.2094 23.4744 0 0

M08306_2.00_rc_shift7 (ZNF384_rc)
; positions_6nt_m4 versus M08306_2.00_rc (ZNF384_rc); m=98/257; ncol2=9; w=0; offset=1; strand=R; shift=7; score=0.625506; -------AAAAAAAAG- ; cor=; Ncor= a 0 0 0 0 0 0 0 99.7807 99.7807 99.7807 99.7807 99.7807 99.7807 99.7807 99.7807 24.0497 0 c 0 0 0 0 0 0 0 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0 g 0 0 0 0 0 0 0 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 75.8041 0 t 0 0 0 0 0 0 0 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0

M01662_2.00_shift7 (ARID3B,ARID3C)
; positions_6nt_m4 versus M01662_2.00 (ARID3B,ARID3C); m=99/257; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.624991; -------kwATyaaaw- ; cor=; Ncor= a 0 0 0 0 0 0 0 24.246 32.2758 84.0479 3.76409 23.864 56.6849 48.6881 38.9881 30.1875 0 c 0 0 0 0 0 0 0 24.0047 15.7103 2.11994 10.9737 31.8925 10.9957 16.3697 14.6327 23.7463 0 g 0 0 0 0 0 0 0 25.7453 23.6726 10.6057 7.35592 11.0494 16.2405 17.7331 23.8851 20.8515 0 t 0 0 0 0 0 0 0 26.004 28.3413 3.22647 77.9062 33.1941 16.0789 17.209 22.4942 25.2147 0

M03037_2.00_shift5 (FOXC2,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXS1)
; positions_6nt_m4 versus M03037_2.00 (FOXC2,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXS1); m=100/257; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.624499; -----rTAAAyAAACA- ; cor=; Ncor= a 0 0 0 0 0 36.303 15.1987 88.5964 92.7934 92.6866 0.638658 97.9631 95.1148 89.6938 6.54029 85.9496 0 c 0 0 0 0 0 8.81527 11.1911 9.52021 3.39093 0.337984 37.3115 1.3985 1.60874 1.35699 71.4389 3.93438 0 g 0 0 0 0 0 44.1076 1.16351 1.01045 1.85745 6.4145 0.184672 0.349624 0.885544 2.76966 3.37546 4.93465 0 t 0 0 0 0 0 10.7742 72.4467 0.872972 1.95824 0.560909 61.8652 0.28882 2.39097 6.17954 18.6454 5.18138 0

M06251_2.00_rc_shift6 (DBX1,DBX2,HLX_rc)
; positions_6nt_m4 versus M06251_2.00_rc (DBX1,DBX2,HLX_rc); m=101/257; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.623985; ------byAATwAw--- ; cor=; Ncor= a 0 0 0 0 0 0 14.0952 5.33333 72 85.5238 1.71429 63.2381 80.5714 49.9048 0 0 0 c 0 0 0 0 0 0 27.8095 33.3333 18.8571 10.0952 0 3.80952 5.90476 13.5238 0 0 0 g 0 0 0 0 0 0 26.6667 1.90476 7.42857 0 3.04762 0.380952 2.47619 5.33333 0 0 0 t 0 0 0 0 0 0 31.4286 59.4286 1.71429 4.38095 95.2381 32.5714 11.0476 31.2381 0 0 0

M09674_2.00_rc_shift5 (M09674_2.00_rc)
; positions_6nt_m4 versus M09674_2.00_rc; m=102/257; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.622499; -----rrymATAAAa-- ; cor=; Ncor= a 0 0 0 0 0 37.2373 31.0453 0.581395 33.4908 97.093 11.5587 77.201 86.4085 87.1199 48.4407 0 0 c 0 0 0 0 0 9.75194 24.799 44.3691 52.4448 0.968992 6.87239 1.74419 3.53309 2.32558 8.5486 0 0 g 0 0 0 0 0 44.034 40.1401 0.914729 0.968992 0.968992 0.968992 6.0972 0.968992 2.32558 20.6828 0 0 t 0 0 0 0 0 8.97674 4.0155 54.1348 13.0954 0.968992 80.5999 14.9577 9.08945 8.22898 22.328 0 0

M03035_2.00_shift4 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXL1,FOXS1)
; positions_6nt_m4 versus M03035_2.00 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXL1,FOXS1); m=103/257; ncol2=13; w=-2; offset=-2; strand=D; shift=4; score=0.621757; ----wrTAAAyAAAyAa ; cor=; Ncor= a 0 0 0 0 27.2199 29.819 12.9027 76.6376 83.3549 90.965 0.37676 98.4061 93.914 84.9468 3.89792 82.8822 43.4024 c 0 0 0 0 14.2188 4.64639 5.03679 14.0223 5.69506 0.27972 41.9988 0.708383 1.11669 1.29245 65.9675 5.55962 17.8504 g 0 0 0 0 14.3874 52.1739 2.42028 1.11596 3.83122 7.4965 0.0198295 0.295159 1.39587 4.23213 3.93288 5.75469 15.4544 t 0 0 0 0 44.1738 13.3607 79.6402 8.22416 7.11882 1.25874 57.6046 0.590319 3.57342 9.52864 26.2017 5.80346 23.2928

M01557_2.00_shift6 (M01557_2.00)
; positions_6nt_m4 versus M01557_2.00; m=104/257; ncol2=8; w=0; offset=0; strand=D; shift=6; score=0.619422; ------TTAATAAA--- ; cor=; Ncor= a 0 0 0 0 0 0 0.961538 0.961538 97.1154 97.1154 0.961538 97.1154 97.1154 97.1154 0 0 0 c 0 0 0 0 0 0 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0 0 0 g 0 0 0 0 0 0 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0 0 0 t 0 0 0 0 0 0 97.1154 97.1154 0.961538 0.961538 97.1154 0.961538 0.961538 0.961538 0 0 0

M00509_2.00_rc_shift6 (HOXC6_rc)
; positions_6nt_m4 versus M00509_2.00_rc (HOXC6_rc); m=105/257; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.618044; ------gymrtwaa--- ; cor=; Ncor= a 0 0 0 0 0 0 24.7161 19.3063 31.7611 44.8338 17.2335 41.2167 51.0367 45.4306 0 0 0 c 0 0 0 0 0 0 24.2267 30.2783 31.7611 14.4828 17.9368 14.4233 13.0991 17.222 0 0 0 g 0 0 0 0 0 0 32.3772 16.9528 17.783 25.6095 16.5577 15.3152 16.3225 14.1002 0 0 0 t 0 0 0 0 0 0 18.68 33.4627 18.6948 15.0739 48.272 29.0449 19.5416 23.2472 0 0 0

M00248_2.00_rc_shift6 (WT1_rc)
; positions_6nt_m4 versus M00248_2.00_rc (WT1_rc); m=106/257; ncol2=13; w=0; offset=0; strand=R; shift=6; score=0.612976; ------tamATATAAtA ; cor=; Ncor= a 0 0 0 0 0 0 22.5797 40.0671 25.0544 85.1835 12.1696 89.532 20.5397 99.8774 72.5594 14.775 70.0218 c 0 0 0 0 0 0 22.5797 19.9776 44.8494 4.93882 2.52855 0.0408538 9.68195 0.0408538 2.46114 5.06322 9.99275 g 0 0 0 0 0 0 22.5797 19.9776 15.0481 4.93882 2.52855 10.3863 0.0408538 0.0408538 2.46114 14.9523 9.99275 t 0 0 0 0 0 0 32.2609 19.9776 15.0481 4.93882 82.7733 0.0408538 69.7375 0.0408538 22.5183 65.2095 9.99275

M03735_2.00_shift4 (FOXB2)
; positions_6nt_m4 versus M03735_2.00 (FOXB2); m=107/257; ncol2=13; w=-2; offset=-2; strand=D; shift=4; score=0.608677; ----wwAsAATAAyATT ; cor=; Ncor= a 0 0 0 0 48.8673 63.2653 98.4127 10.3718 91.9881 97.4843 6.12245 99.359 96.5732 0 85.3994 18.7097 14.2395 c 0 0 0 0 20.0647 0.816327 0 60.6654 1.48368 0.628931 3.49854 0 0 49.0323 0.550964 6.12903 12.2977 g 0 0 0 0 1.94175 0 1.5873 26.8102 4.74777 1.88679 0 0.641026 1.55763 0 7.7135 6.45161 2.26537 t 0 0 0 0 29.1262 35.9184 0 2.15264 1.78042 0 90.379 0 1.86916 50.9677 6.33609 68.7097 71.1974

M05899_2.00_shift8 (ARID3B,ARID3C)
; positions_6nt_m4 versus M05899_2.00 (ARID3B,ARID3C); m=108/257; ncol2=8; w=0; offset=2; strand=D; shift=8; score=0.606487; --------AATyAAAm- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 80.9524 100 0 4.7619 95.2381 85.7143 90.4762 45 0 c 0 0 0 0 0 0 0 0 0 0 0 61.9048 0 9.52381 9.52381 40 0 g 0 0 0 0 0 0 0 0 4.7619 0 0 0 4.7619 4.7619 0 5 0 t 0 0 0 0 0 0 0 0 14.2857 0 100 33.3333 0 0 0 10 0

M02183_2.00_shift6 (M02183_2.00)
; positions_6nt_m4 versus M02183_2.00; m=109/257; ncol2=8; w=0; offset=0; strand=D; shift=6; score=0.605303; ------GYAATwAA--- ; cor=; Ncor= a 0 0 0 0 0 0 9.14855 0.0766871 92.1012 99.7699 0.0766871 53.7577 99.7508 88.6062 0 0 0 c 0 0 0 0 0 0 0.0905797 30.7515 7.7454 0.0766871 0.0766871 0.0766871 0.0830565 11.1726 0 0 0 g 0 0 0 0 0 0 90.6703 0.0766871 0.0766871 0.0766871 0.0766871 0.0766871 0.0830565 0.110619 0 0 0 t 0 0 0 0 0 0 0.0905797 69.0951 0.0766871 0.0766871 99.7699 46.089 0.0830565 0.110619 0 0 0

M03781_2.00_rc_shift4 (M03781_2.00_rc)
; positions_6nt_m4 versus M03781_2.00_rc; m=110/257; ncol2=12; w=-2; offset=-2; strand=R; shift=4; score=0.60405; ----rgGyMATAAAay- ; cor=; Ncor= a 0 0 0 0 31.0653 23.6664 20.877 0.316355 25.9129 92.3276 0 99.6273 99.405 99.5623 53.0699 23.0676 0 c 0 0 0 0 15.0533 11.0271 1.94934 37.5243 72.1701 0 0.0280505 0 0 0.0884626 20.5144 30.3858 0 g 0 0 0 0 38.0845 44.5416 77.0511 0.0957771 0.590618 7.67238 0 0.0372717 0 0.0372474 6.85995 19.6119 0 t 0 0 0 0 15.7969 20.7649 0.122509 62.0636 1.32636 0 99.9719 0.335445 0.595017 0.311947 19.5558 26.9348 0

M03059_2.00_shift5 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1)
; positions_6nt_m4 versus M03059_2.00 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1); m=111/257; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score=0.60394; -----rTAAAyAAACA- ; cor=; Ncor= a 0 0 0 0 0 30.2211 9.81333 88.0629 96.2794 98.0568 0.198282 99.5409 99.8467 94.9604 2.60223 94.5196 0 c 0 0 0 0 0 2.49795 8.8 10.0786 2.2779 0.0747384 41.5069 0.153022 0 1.79986 82.8377 2.13523 0 g 0 0 0 0 0 65.1925 1.6 0.500357 0.455581 1.86846 0.0660939 0.0765111 0 1.87185 0.929368 2.84698 0 t 0 0 0 0 0 2.08845 79.7867 1.35811 0.987092 0 58.2287 0.229533 0.153257 1.36789 13.6307 0.498221 0

M09682_2.00_rc_shift7 (HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M09682_2.00_rc (HOXC5,HOXC6_rc); m=112/257; ncol2=9; w=0; offset=1; strand=R; shift=7; score=0.602842; -------TmATTAAaa- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.657895 61.8421 93.8596 0.657895 21.4912 87.5 70.3947 64.4737 67.7632 0 c 0 0 0 0 0 0 0 14.2544 36.8421 4.82456 0.657895 8.99123 0 8.99123 14.2544 15.1316 0 g 0 0 0 0 0 0 0 0.657895 0.657895 0.657895 0.657895 0.657895 0 0.657895 20.614 9.86842 0 t 0 0 0 0 0 0 0 84.4298 0.657895 0.657895 98.0263 68.8596 12.5 19.9561 0.657895 7.23684 0

M06211_2.00_shift7 (HOXC5,HOXC6)
; positions_6nt_m4 versus M06211_2.00 (HOXC5,HOXC6); m=113/257; ncol2=8; w=0; offset=1; strand=D; shift=7; score=0.601115; -------yCATAAAA-- ; cor=; Ncor= a 0 0 0 0 0 0 0 14.2857 14.2857 85.7143 0 100 100 85.7143 71.4286 0 0 c 0 0 0 0 0 0 0 28.5714 71.4286 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 14.2857 14.2857 0 0 0 0 14.2857 0 0 t 0 0 0 0 0 0 0 57.1429 0 0 100 0 0 14.2857 14.2857 0 0

M00389_2.00_rc_shift5 (M00389_2.00_rc)
; positions_6nt_m4 versus M00389_2.00_rc; m=114/257; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.600854; -----scyhrTwAAa-- ; cor=; Ncor= a 0 0 0 0 0 22.897 19.1994 13.2557 32.4192 55.2686 4.6339 62.2496 82.2278 75.8821 40.2869 0 0 c 0 0 0 0 0 25.3051 41.8829 35.6741 36.9199 2.36838 5.89084 3.97948 1.08274 8.66403 20.0059 0 0 g 0 0 0 0 0 27.9665 24.4072 7.05986 5.41272 35.595 0.0504586 6.627 4.39072 4.21724 15.2721 0 0 t 0 0 0 0 0 23.8314 14.5106 44.0104 25.2481 6.768 89.4248 27.1439 12.2987 11.2366 24.4352 0 0

M01105_2.00_shift6 (M01105_2.00)
; positions_6nt_m4 versus M01105_2.00; m=115/257; ncol2=9; w=0; offset=0; strand=D; shift=6; score=0.600439; ------waarwwwww-- ; cor=; Ncor= a 0 0 0 0 0 0 37.434 33.1918 36.7239 39.8201 30.6146 57.2249 60.2371 50.597 33.1768 0 0 c 0 0 0 0 0 0 17.3324 23.625 21.1878 10.6374 17.3133 0.213737 9.28396 4.82539 9.60085 0 0 g 0 0 0 0 0 0 18.5892 21.5916 19.3642 25.3904 15.0515 14.9841 4.47402 5.95298 10.6106 0 0 t 0 0 0 0 0 0 26.6444 21.5916 22.7241 24.1521 37.0206 27.5772 26.005 38.6247 46.6117 0 0

M08855_2.00_rc_shift5 (PRDM6_rc)
; positions_6nt_m4 versus M08855_2.00_rc (PRDM6_rc); m=116/257; ncol2=13; w=-1; offset=-1; strand=R; shift=5; score=0.599659; -----arrarGAAAAaa ; cor=; Ncor= a 0 0 0 0 0 46.4 53 43.4 61.6 47.2 0.2 97.8 98.4 93.8 76 60.4 49.2 c 0 0 0 0 0 16.6 7 19.6 3.8 1 4.6 1.6 0.4 0.8 13.2 23.4 19.2 g 0 0 0 0 0 24.6 26.8 33 20.2 45.2 94.2 0 0 0.8 6.8 11.2 12.6 t 0 0 0 0 0 12.4 13.2 4 14.4 6.6 1 0.6 1.2 4.6 4 5 19

M02092_2.00_rc_shift5 (HOXB13_rc)
; positions_6nt_m4 versus M02092_2.00_rc (HOXB13_rc); m=117/257; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.598688; -----scyhrTwAAa-- ; cor=; Ncor= a 0 0 0 0 0 24.2336 19.7551 15.1577 32.7507 57.3867 5.11546 55.7684 72.7356 69.2102 37.1868 0 0 c 0 0 0 0 0 26.5157 40.9935 39.1933 33.4123 2.38646 10.7217 6.89784 6.15233 11.2138 21.6706 0 0 g 0 0 0 0 0 27.3233 24.6164 7.99252 6.48132 34.1176 0.0408548 8.50971 8.47254 7.66871 16.7091 0 0 t 0 0 0 0 0 21.9274 14.635 37.6565 27.3557 6.1093 84.122 28.824 12.6395 11.9073 24.4335 0 0

M00293_2.00_rc_shift5 (HOXD13_rc)
; positions_6nt_m4 versus M00293_2.00_rc (HOXD13_rc); m=118/257; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score= 0.5979; -----gsyhrTwAaw-- ; cor=; Ncor= a 0 0 0 0 0 23.8214 22.3966 15.1078 31.6447 54.485 3.93707 55.2895 74.4533 65.3982 35.8579 0 0 c 0 0 0 0 0 24.7936 35.8344 36.061 32.9361 4.51735 9.30393 6.31282 3.12731 11.9472 21.3183 0 0 g 0 0 0 0 0 26.5913 25.5058 10.5404 8.45341 34.0533 1.09465 10.9417 6.29762 7.61786 17.8065 0 0 t 0 0 0 0 0 24.7936 16.2632 38.2909 26.9658 6.94433 85.6643 27.456 16.1218 15.0367 25.0172 0 0

M06225_2.00_rc_shift7 (M06225_2.00_rc)
; positions_6nt_m4 versus M06225_2.00_rc; m=119/257; ncol2=8; w=0; offset=1; strand=R; shift=7; score=0.597041; -------ymATwAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 0 2.04225 56.4085 89.2254 0 50.7746 85.8451 73.3099 36.4789 0 0 c 0 0 0 0 0 0 0 39.3662 27.9577 2.32394 0 3.59155 0.422535 8.16901 21.831 0 0 g 0 0 0 0 0 0 0 1.5493 1.19718 8.4507 0 0.704225 1.05634 9.50704 17.3239 0 0 t 0 0 0 0 0 0 0 57.0423 14.4366 0 100 44.9296 12.6761 9.01408 24.3662 0 0

M09161_2.00_rc_shift5 (HOXC5,HOXC6,HOXC9_rc)
; positions_6nt_m4 versus M09161_2.00_rc (HOXC5,HOXC6,HOXC9_rc); m=120/257; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.593594; -----dGCmATaAAw-- ; cor=; Ncor= a 0 0 0 0 0 29.6 7 2.8 49 94.6 0.4 61.8 96.4 88.6 51 0 0 c 0 0 0 0 0 1.6 13.4 80.2 45.4 1.8 1.2 3.2 1.6 4.6 7.4 0 0 g 0 0 0 0 0 40 77.4 1.4 0.4 2.4 2.4 12.6 1.2 2.8 15.6 0 0 t 0 0 0 0 0 28.8 2.2 15.6 5.2 1.2 96 22.4 0.8 4 26 0 0

M00297_2.00_rc_shift5 (HOXD13_rc)
; positions_6nt_m4 versus M00297_2.00_rc (HOXD13_rc); m=121/257; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.592977; -----gsgtaywAaa-- ; cor=; Ncor= a 0 0 0 0 0 24.9574 21.532 22.9275 20.2625 63.4014 4.89403 54.5821 79.2274 64.0553 36.5909 0 0 c 0 0 0 0 0 23.504 34.451 16.1567 17.7924 17.107 28.1632 8.58233 6.43867 12.6765 22.1935 0 0 g 0 0 0 0 0 30.483 26.5635 37.0526 15.9391 13.3229 2.99821 7.76562 3.39506 7.31368 16.4414 0 0 t 0 0 0 0 0 21.0557 17.4535 23.8632 46.006 6.16869 63.9446 29.07 10.9389 15.9546 24.7742 0 0

M10718_2.00_rc_shift4 (NKX6-1_rc)
; positions_6nt_m4 versus M10718_2.00_rc (NKX6-1_rc); m=122/257; ncol2=13; w=-2; offset=-2; strand=R; shift=4; score=0.592735; ----AwcCAATTAAAwa ; cor=; Ncor= a 0 0 0 0 76.4706 64.7059 11.7647 11.7647 70.5882 100 0 0 100 94.1176 76.4706 58.8235 52.9412 c 0 0 0 0 5.88235 0 58.8235 82.3529 23.5294 0 0 0 0 5.88235 0 0 5.88235 g 0 0 0 0 5.88235 5.88235 11.7647 0 0 0 0 0 0 0 17.6471 5.88235 23.5294 t 0 0 0 0 11.7647 29.4118 17.6471 5.88235 5.88235 0 100 100 0 0 5.88235 35.2941 17.6471

M00554_2.00_rc_shift5 (HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M00554_2.00_rc (HOXC5,HOXC6_rc); m=123/257; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.592309; -----rgymrTwAaw-- ; cor=; Ncor= a 0 0 0 0 0 27.2318 23.6474 15.7584 34.0063 58.6239 5.69668 51.0046 76.869 64.1576 37.1455 0 0 c 0 0 0 0 0 20.1738 23.1791 35.4234 40.7129 9.69046 6.04895 7.04217 5.65252 13.6173 19.9822 0 0 g 0 0 0 0 0 33.5953 40.5791 8.47713 8.72809 26.8735 0.0298935 3.7883 5.27038 7.32536 17.7226 0 0 t 0 0 0 0 0 18.999 12.5944 40.3411 16.5526 4.81214 88.2245 38.1649 12.2081 14.8997 25.1496 0 0

M00505_2.00_rc_shift5 (M00505_2.00_rc)
; positions_6nt_m4 versus M00505_2.00_rc; m=124/257; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.591875; -----ssyhrTwAaa-- ; cor=; Ncor= a 0 0 0 0 0 23.771 20.9917 14.7959 31.594 51.668 5.55834 56.5888 78.2973 66.6261 37.3403 0 0 c 0 0 0 0 0 25.4946 38.6337 37.1273 34.2254 3.6871 10.0272 5.67353 1.52274 11.8118 20.9068 0 0 g 0 0 0 0 0 27.8955 25.1316 9.4343 7.79099 37.1454 0.0370792 9.35407 5.58739 7.83888 17.4628 0 0 t 0 0 0 0 0 22.8389 15.2431 38.6425 26.3896 7.49952 84.3774 28.3836 14.5926 13.7233 24.2902 0 0

M09158_2.00_rc_shift3 (EVX2,HOXC5,NANOGP8,NKX1-1,NKX1-2,TLX1_rc)
; positions_6nt_m4 versus M09158_2.00_rc (EVX2,HOXC5,NANOGP8,NKX1-1,NKX1-2,TLX1_rc); m=125/257; ncol2=13; w=-3; offset=-3; strand=R; shift=3; score=0.591286; ---rrrGymATAAAam- ; cor=; Ncor= a 0 0 0 41.8 36.8 38.2 11.2 0.8 45.2 93.8 0.2 92.2 97.8 96.4 49.4 29.8 0 c 0 0 0 19 19.6 4.8 10.6 60.6 49.6 0 0.4 2.8 0 1.4 20.8 36.2 0 g 0 0 0 25 30.8 41.4 73.6 0 0.6 5.8 1 2.2 0.8 1 18.2 17.6 0 t 0 0 0 14.2 12.8 15.6 4.6 38.6 4.6 0.4 98.4 2.8 1.4 1.2 11.6 16.4 0

M08131_2.00_rc_shift4 (CDX2_rc)
; positions_6nt_m4 versus M08131_2.00_rc (CDX2_rc); m=126/257; ncol2=11; w=-2; offset=-2; strand=R; shift=4; score=0.588053; ----rdGymATAAAa-- ; cor=; Ncor= a 0 0 0 0 38.3845 41.6406 19.2862 0 43.6443 100 0 100 100 100 63.4314 0 0 c 0 0 0 0 19.975 0.500939 8.51597 65.623 52.0977 0 0 0 0 0 9.39261 0 0 g 0 0 0 0 30.0564 31.4339 72.1979 0 0 0 0 0 0 0 19.5992 0 0 t 0 0 0 0 11.5842 26.4245 0 34.377 4.25798 0 100 0 0 0 7.57671 0 0

M00475_2.00_rc_shift6 (HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M00475_2.00_rc (HOXC5,HOXC6_rc); m=127/257; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.586241; ------gymatwaa--- ; cor=; Ncor= a 0 0 0 0 0 0 23.7811 18.1949 32.6787 50.4181 15.9948 41.1281 52.2166 45.5358 0 0 0 c 0 0 0 0 0 0 23.0782 35.5571 34.6994 13.2018 13.227 14.5369 15.4159 18.5135 0 0 0 g 0 0 0 0 0 0 37.6709 13.7514 16.0663 24.7878 12.0886 10.6621 14.8114 16.0948 0 0 0 t 0 0 0 0 0 0 15.4698 32.4967 16.5556 11.5924 58.6896 33.6729 17.5561 19.8559 0 0 0

M00285_2.00_rc_shift4 (NKX1-1,NKX1-2,OTP,SEBOX,VSX2_rc)
; positions_6nt_m4 versus M00285_2.00_rc (NKX1-1,NKX1-2,OTP,SEBOX,VSX2_rc); m=128/257; ncol2=12; w=-2; offset=-2; strand=R; shift=4; score=0.584271; ----ttwwAATAwAtw- ; cor=; Ncor= a 0 0 0 0 22.5976 22.5976 34.6139 47.449 89.6456 69.9283 0.0323536 79.6396 32.3893 72.2075 19.8268 27.7576 0 c 0 0 0 0 22.5976 22.5976 15.109 7.53215 0.0323536 0.0323536 19.627 0.0323536 2.43477 2.43477 20.1808 17.5002 0 g 0 0 0 0 22.5976 22.5976 24.7186 17.346 0.0323536 10.2897 0.0323536 0.0323536 2.43477 12.3382 9.9234 17.5002 0 t 0 0 0 0 32.2072 32.2072 25.5585 27.6729 10.2897 19.7496 80.3083 20.2957 62.7412 13.0196 50.069 37.242 0

M01551_2.00_shift6 (OTP,SEBOX)
; positions_6nt_m4 versus M01551_2.00 (OTP,SEBOX); m=129/257; ncol2=9; w=0; offset=0; strand=D; shift=6; score=0.581583; ------stAATwwaw-- ; cor=; Ncor= a 0 0 0 0 0 0 15.3118 5.12295 74.3002 88.6081 0.00961698 45.7287 36.1372 52.2147 32.9757 0 0 c 0 0 0 0 0 0 26.0137 23.6587 12.783 4.41154 0.874393 14.1927 13.2941 15.262 19.6048 0 0 g 0 0 0 0 0 0 34.4195 3.61008 2.55516 2.10481 0.051087 4.10714 4.16753 10.6479 12.7531 0 0 t 0 0 0 0 0 0 24.255 67.6083 10.3617 4.87551 99.0649 35.9715 46.4011 21.8754 34.6664 0 0

M09398_2.00_rc_shift6 (SOX1,SRY_rc)
; positions_6nt_m4 versus M09398_2.00_rc (SOX1,SRY_rc); m=130/257; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.57988; ------wwAACAAwr-- ; cor=; Ncor= a 0 0 0 0 0 0 39.2907 57.4864 73.3199 90.9781 1.65708 87.0204 87.6188 55.217 46.9304 0 0 c 0 0 0 0 0 0 2.6237 6.98093 3.40621 3.49827 91.0094 3.02236 4.12708 4.44928 14.0995 0 0 g 0 0 0 0 0 0 24.1953 9.46654 4.0194 0 7.33355 0.460299 0.460299 3.66678 28.5373 0 0 t 0 0 0 0 0 0 33.8904 26.0661 19.2545 5.52359 0 9.49696 7.79385 36.6669 10.4328 0 0

M09408_2.00_rc_shift6 (SOX1_rc)
; positions_6nt_m4 versus M09408_2.00_rc (SOX1_rc); m=131/257; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.57988; ------wwAACAAwr-- ; cor=; Ncor= a 0 0 0 0 0 0 39.2907 57.4864 73.3199 90.9781 1.65708 87.0204 87.6188 55.217 46.9304 0 0 c 0 0 0 0 0 0 2.6237 6.98093 3.40621 3.49827 91.0094 3.02236 4.12708 4.44928 14.0995 0 0 g 0 0 0 0 0 0 24.1953 9.46654 4.0194 0 7.33355 0.460299 0.460299 3.66678 28.5373 0 0 t 0 0 0 0 0 0 33.8904 26.0661 19.2545 5.52359 0 9.49696 7.79385 36.6669 10.4328 0 0

M00750_2.00_shift7 (M00750_2.00)
; positions_6nt_m4 versus M00750_2.00; m=132/257; ncol2=8; w=0; offset=1; strand=D; shift=7; score=0.579499; -------AAAwAaAt-- ; cor=; Ncor= a 0 0 0 0 0 0 0 75 80 73.3333 26.6667 73.3333 66.6667 69.2308 16.6667 0 0 c 0 0 0 0 0 0 0 8.33333 6.66667 6.66667 6.66667 6.66667 6.66667 7.69231 8.33333 0 0 g 0 0 0 0 0 0 0 8.33333 6.66667 6.66667 6.66667 6.66667 6.66667 7.69231 8.33333 0 0 t 0 0 0 0 0 0 0 8.33333 6.66667 13.3333 60 13.3333 20 15.3846 66.6667 0 0

M01678_2.00_shift6 (M01678_2.00)
; positions_6nt_m4 versus M01678_2.00; m=133/257; ncol2=8; w=0; offset=0; strand=D; shift=6; score=0.574942; ------aaarwAww--- ; cor=; Ncor= a 0 0 0 0 0 0 42.1032 36.1549 39.9952 40.7012 28.7986 78.0909 56.2556 41.7051 0 0 0 c 0 0 0 0 0 0 21.3302 21.0692 12.9198 8.13567 14.301 0.0177366 0.0620326 9.30567 0 0 0 g 0 0 0 0 0 0 21.9798 21.281 23.3071 26.4765 13.0701 13.9834 17.6353 11.2529 0 0 0 t 0 0 0 0 0 0 14.5869 21.4949 23.7779 24.6866 43.8304 7.90798 26.0471 37.7363 0 0 0

M00508_2.00_rc_shift5 (M00508_2.00_rc)
; positions_6nt_m4 versus M00508_2.00_rc; m=134/257; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.574699; -----rrymrTwAaw-- ; cor=; Ncor= a 0 0 0 0 0 25.6067 26.3052 13.8894 32.0918 43.6555 11.8057 51.3416 70.4721 58.598 35.7531 0 0 c 0 0 0 0 0 22.0399 23.5651 31.5358 37.2853 10.5522 11.0075 12.5347 6.32947 13.7454 21.0444 0 0 g 0 0 0 0 0 30.9649 37.704 10.7094 15.3114 38.719 3.59154 7.0887 6.99515 10.1828 17.7545 0 0 t 0 0 0 0 0 21.3885 12.4257 43.8653 15.3114 7.07332 73.5952 29.035 16.2033 17.4738 25.448 0 0

M09580_2.00_rc_shift5 (M09580_2.00_rc)
; positions_6nt_m4 versus M09580_2.00_rc; m=135/257; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.569537; -----ggyCATAAAw-- ; cor=; Ncor= a 0 0 0 0 0 23.2 24.5 2.2 20.9 72.5 0.1 98 94.7 95.4 44.6 0 0 c 0 0 0 0 0 13.4 14.8 53.9 75.6 2.1 0.1 0.1 0.1 4.2 12.9 0 0 g 0 0 0 0 0 47.4 60.6 2.1 2.8 24.5 0.2 1.2 0.4 0.3 12.1 0 0 t 0 0 0 0 0 16 0.1 41.8 0.7 0.9 99.6 0.7 4.8 0.1 30.4 0 0

M00296_2.00_shift7 (HOXD13)
; positions_6nt_m4 versus M00296_2.00 (HOXD13); m=136/257; ncol2=8; w=0; offset=1; strand=D; shift=7; score=0.569104; -------GkATAAAw-- ; cor=; Ncor= a 0 0 0 0 0 0 0 13.0048 8.66656 90.9539 0.00694252 81.2344 96.5079 98.4626 48.8783 0 0 c 0 0 0 0 0 0 0 3.0088 10.2409 0.00694252 0.00694252 0.00694252 0.00694252 0.00757346 14.4491 0 0 g 0 0 0 0 0 0 0 75.9796 25.1968 2.78395 0.00694252 0.00694252 0.00694252 0.00757346 7.78543 0 0 t 0 0 0 0 0 0 0 8.0068 55.8958 6.25521 99.9792 18.7517 3.4782 1.52227 28.8872 0 0

M00538_2.00_rc_shift5 (M00538_2.00_rc)
; positions_6nt_m4 versus M00538_2.00_rc; m=137/257; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.569001; -----rrymrtwaaw-- ; cor=; Ncor= a 0 0 0 0 0 25.5374 27.194 14.0484 32.7127 42.7202 13.6804 49.0305 67.305 57.0495 34.4765 0 0 c 0 0 0 0 0 21.9803 23.8789 28.0085 38.0067 12.1177 11.2006 12.7107 8.6645 12.7295 21.1212 0 0 g 0 0 0 0 0 29.375 36.708 10.832 15.2986 37.5124 7.35932 8.52023 7.76196 10.8473 17.8192 0 0 t 0 0 0 0 0 23.1072 12.219 47.1111 13.9819 7.64973 67.7597 29.7385 16.2686 19.3737 26.5831 0 0

M03153_2.00_rc_shift6 (LMX1B,OTP,SEBOX_rc)
; positions_6nt_m4 versus M03153_2.00_rc (LMX1B,OTP,SEBOX_rc); m=138/257; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.568535; ------tyAATtAa--- ; cor=; Ncor= a 0 0 0 0 0 0 21.122 11.1735 79.1088 93.5021 7.02304 21.4912 87.1811 51.3171 0 0 0 c 0 0 0 0 0 0 23.5366 29.4216 5.90278 1.36799 0.24603 6.53178 1.9983 16.1463 0 0 0 g 0 0 0 0 0 0 23.9512 3.49563 6.34645 0.980392 1.00649 6.6433 0.42517 19.7317 0 0 0 t 0 0 0 0 0 0 31.3902 55.9093 8.64198 4.14957 91.7244 65.3338 10.3954 12.8049 0 0 0

M03782_2.00_rc_shift4 (M03782_2.00_rc)
; positions_6nt_m4 versus M03782_2.00_rc; m=139/257; ncol2=12; w=-2; offset=-2; strand=R; shift=4; score=0.568167; ----vgGYMATAAAms- ; cor=; Ncor= a 0 0 0 0 31.2432 23.4868 10.1975 0 29.236 93.9394 0 96.5023 95.4341 94.9742 32.5118 15.1197 0 c 0 0 0 0 25.8065 20.5147 12.8137 71.8677 69.4288 1.02145 0 0 0 2.37522 37.2236 41.0805 0 g 0 0 0 0 33.5629 32.2581 73.6519 0 0 5.03916 0 0.0349773 0 0.550775 10.9822 25.6345 0 t 0 0 0 0 9.38746 23.7405 3.33689 28.1323 1.33517 0 100 3.46275 4.56589 2.09983 19.2823 18.1653 0

M02196_2.00_rc_shift6 (M02196_2.00_rc)
; positions_6nt_m4 versus M02196_2.00_rc; m=140/257; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.566098; ------GYMATwAA--- ; cor=; Ncor= a 0 0 0 0 0 0 17.6557 0.0227066 69.964 86.2265 0.0195925 35.2861 97.8997 81.5195 0 0 0 c 0 0 0 0 0 0 5.90482 27.2707 25.9992 3.93809 0.0195925 0.0195925 0.0203915 5.28391 0 0 0 g 0 0 0 0 0 0 73.4724 2.29337 0.019984 9.81583 1.97884 0.0195925 0.0203915 2.6551 0 0 0 t 0 0 0 0 0 0 2.9671 70.4133 4.01679 0.0195925 97.982 64.6748 2.05954 10.5415 0 0 0

M00390_2.00_rc_shift5 (M00390_2.00_rc)
; positions_6nt_m4 versus M00390_2.00_rc; m=141/257; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.565994; -----rsymrTwAaa-- ; cor=; Ncor= a 0 0 0 0 0 26.117 24.7986 15.076 29.9041 49.3099 12.0043 52.691 76.2537 65.5904 38.9216 0 0 c 0 0 0 0 0 20.1375 25.5538 28.3068 47.3703 7.6762 7.06578 5.0251 3.36715 9.71266 20.1167 0 0 g 0 0 0 0 0 33.2012 38.5049 8.52585 8.31446 38.0205 2.25977 4.78002 7.12825 9.61601 16.6357 0 0 t 0 0 0 0 0 20.5443 11.1427 48.0914 14.4111 4.99344 78.6702 37.5039 13.2509 15.0809 24.3261 0 0

M04851_2.00_shift4 (FOXD2,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1)
; positions_6nt_m4 versus M04851_2.00 (FOXD2,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1); m=142/257; ncol2=14; w=-2; offset=-2; strand=D; shift=4; score=0.56335; ----wwACAATAAyAtt ; cor=; Ncor= a 0 0 0 0 45.8256 65.0355 93.2347 5.69813 83.2647 92.9488 0.729507 99.6508 98.0991 0 86.0259 24.8536 17.5719 c 0 0 0 0 20.9029 1.11275 0.172977 70.3349 1.93958 6.66794 5.89365 0.26705 0 62.585 0.0532009 9.24905 10.3354 g 0 0 0 0 4.72068 0.12066 4.92024 22.517 14.6756 0 0.249568 0.0821693 0.424671 0 12.9456 7.19945 7.06624 t 0 0 0 0 28.5508 33.7311 1.67211 1.44991 0.120151 0.383215 93.1273 0 1.47624 37.415 0.97535 58.6979 65.0264

M00493_2.00_rc_shift6 (M00493_2.00_rc)
; positions_6nt_m4 versus M00493_2.00_rc; m=143/257; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.562386; ------vymrtwaa--- ; cor=; Ncor= a 0 0 0 0 0 0 25.9281 18.0638 29.6012 38.4068 19.0588 44.3489 58.0384 50.5587 0 0 0 c 0 0 0 0 0 0 25.6701 27.4924 39.1662 13.7115 18.3115 13.7644 13.2117 15.5356 0 0 0 g 0 0 0 0 0 0 33.2923 14.6422 13.9826 32.7281 13.8395 12.4546 11.9545 11.8596 0 0 0 t 0 0 0 0 0 0 15.1095 39.8017 17.25 15.1536 48.7902 29.4321 16.7954 22.0461 0 0 0

M06203_2.00_shift3 (FOXP4)
; positions_6nt_m4 versus M06203_2.00 (FOXP4); m=144/257; ncol2=15; w=-3; offset=-3; strand=D; shift=3; score=0.559867; ---mmmmarAAAAAAws ; cor=; Ncor= a 0 0 0 33.7066 33.6656 32.2296 31.5673 42.1634 49.3377 96.0265 99.5585 100 99.117 100 98.6755 44.9227 12.792 c 0 0 0 27.8835 32.2259 26.4901 27.8146 21.0817 5.96026 0 0 0 0 0 0.993377 7.28477 37.3749 g 0 0 0 24.86 19.0476 20.9713 20.3091 15.011 31.7881 0.993377 0 0 0.883002 0 0.331126 3.31126 34.2603 t 0 0 0 13.5498 15.0609 20.3091 20.3091 21.7439 12.9139 2.98013 0.441501 0 0 0 0 44.4812 15.5729

M00470_2.00_shift5 (HOXC5,HOXC6)
; positions_6nt_m4 versus M00470_2.00 (HOXC5,HOXC6); m=145/257; ncol2=10; w=-1; offset=-1; strand=D; shift=5; score=0.559356; -----rgTAATwAAw-- ; cor=; Ncor= a 0 0 0 0 0 29.8013 14.2557 0.0191935 88.9524 99.9424 0.0191935 29.6867 99.9424 74.2546 30.0074 0 0 c 0 0 0 0 0 19.9213 4.87067 19.4455 11.0092 0.0191935 0.0191935 0.0191935 0.0191935 15.5497 20.1485 0 0 g 0 0 0 0 0 30.356 66.1229 0.0191935 0.0191935 0.0191935 0.0191935 9.89922 0.0191935 5.09788 20.1485 0 0 t 0 0 0 0 0 19.9213 14.7507 80.5162 0.0191935 0.0191935 99.9424 60.3949 0.0191935 5.09788 29.6955 0 0

M06244_2.00_shift5 (M06244_2.00)
; positions_6nt_m4 versus M06244_2.00; m=146/257; ncol2=10; w=-1; offset=-1; strand=D; shift=5; score=0.557269; -----twrawyrAAA-- ; cor=; Ncor= a 0 0 0 0 0 16.6667 66.6667 50 50 50 16.6667 33.3333 100 83.3333 83.3333 0 0 c 0 0 0 0 0 16.6667 0 16.6667 16.6667 0 50 16.6667 0 0 16.6667 0 0 g 0 0 0 0 0 16.6667 0 33.3333 16.6667 0 0 33.3333 0 0 0 0 0 t 0 0 0 0 0 50 33.3333 0 16.6667 50 33.3333 16.6667 0 16.6667 0 0 0

M06210_2.00_rc_shift6 (HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M06210_2.00_rc (HOXC5,HOXC6_rc); m=147/257; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.556808; ------kmmATwAw--- ; cor=; Ncor= a 0 0 0 0 0 0 13.5135 27.027 59.4595 97.2973 0 29.7297 89.1892 48.6486 0 0 0 c 0 0 0 0 0 0 5.40541 40.5405 40.5405 0 0 5.40541 2.7027 5.40541 0 0 0 g 0 0 0 0 0 0 35.1351 8.10811 0 0 0 0 0 10.8108 0 0 0 t 0 0 0 0 0 0 45.9459 24.3243 0 2.7027 100 64.8649 8.10811 35.1351 0 0 0

M09093_2.00_shift7 (FOXQ1,FOXS1)
; positions_6nt_m4 versus M09093_2.00 (FOXQ1,FOXS1); m=148/257; ncol2=12; w=0; offset=1; strand=D; shift=7; score=0.554918; -------RaATAAACAA ; cor=; Ncor= a 0 0 0 0 0 0 0 69.2308 61.5385 92.3077 0 100 100 100 0 100 76.9231 c 0 0 0 0 0 0 0 0 23.0769 7.69231 0 0 0 0 100 0 0 g 0 0 0 0 0 0 0 30.7692 0 0 0 0 0 0 0 0 15.3846 t 0 0 0 0 0 0 0 0 15.3846 0 100 0 0 0 0 0 7.69231

M09105_2.00_shift7 (FOXS1)
; positions_6nt_m4 versus M09105_2.00 (FOXS1); m=149/257; ncol2=12; w=0; offset=1; strand=D; shift=7; score=0.554918; -------RaATAAACAA ; cor=; Ncor= a 0 0 0 0 0 0 0 69.2308 61.5385 92.3077 0 100 100 100 0 100 76.9231 c 0 0 0 0 0 0 0 0 23.0769 7.69231 0 0 0 0 100 0 0 g 0 0 0 0 0 0 0 30.7692 0 0 0 0 0 0 0 0 15.3846 t 0 0 0 0 0 0 0 0 15.3846 0 100 0 0 0 0 0 7.69231

M06353_2.00_shift7 (OTP,SEBOX)
; positions_6nt_m4 versus M06353_2.00 (OTP,SEBOX); m=150/257; ncol2=8; w=0; offset=1; strand=D; shift=7; score=0.553143; -------YAATwAaw-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.478469 84.8804 98.0861 0 41.0526 78.1818 46.6986 34.6411 0 0 c 0 0 0 0 0 0 0 31.0048 14.6411 1.5311 0 3.82775 0.76555 16.9378 17.4163 0 0 g 0 0 0 0 0 0 0 0.0956938 0.478469 0 0.191388 0 0.287081 15.1196 20.2871 0 0 t 0 0 0 0 0 0 0 68.4211 0 0.382775 99.8086 55.1196 20.7656 21.244 27.6555 0 0

M00056_2.00_shift7 (OTP,SEBOX)
; positions_6nt_m4 versus M00056_2.00 (OTP,SEBOX); m=151/257; ncol2=8; w=0; offset=1; strand=D; shift=7; score=0.552914; -------TAATAwat-- ; cor=; Ncor= a 0 0 0 0 0 0 0 7.09225 86.6502 87.326 0.00620964 75.1428 63.5123 66.9102 20.6916 0 0 c 0 0 0 0 0 0 0 7.09225 1.33964 1.27183 0.00620964 3.11103 5.03647 6.15964 5.75597 0 0 g 0 0 0 0 0 0 0 0.795025 1.33964 1.90458 0.00620964 1.8691 0.63506 3.08367 5.75597 0 0 t 0 0 0 0 0 0 0 85.0205 10.6705 9.4976 99.9814 19.877 30.8161 23.8465 67.7964 0 0

M00382_2.00_rc_shift5 (HOXC6_rc)
; positions_6nt_m4 versus M00382_2.00_rc (HOXC6_rc); m=152/257; ncol2=9; w=-1; offset=-1; strand=R; shift=5; score=0.552426; -----grymrtwaa--- ; cor=; Ncor= a 0 0 0 0 0 23.6621 25.2747 18.4371 34.6373 53.1765 14.6872 44.8155 58.4872 48.0589 0 0 0 c 0 0 0 0 0 23.4266 23.8028 32.2774 34.9855 9.91071 11.3246 11.0514 11.5745 17.3298 0 0 0 g 0 0 0 0 0 29.4847 34.8065 13.2549 14.6572 25.6262 8.81961 9.23087 13.1814 15.8382 0 0 0 t 0 0 0 0 0 23.4266 16.1159 36.0306 15.72 11.2866 65.1686 34.9023 16.7569 18.7731 0 0 0

M06476_2.00_rc_shift7 (HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M06476_2.00_rc (HOXC5,HOXC6_rc); m=153/257; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.551491; -------tmATAAA--- ; cor=; Ncor= a 0 0 0 0 0 0 0 14.2857 33.3333 85.7143 0 76.1905 100 95.2381 0 0 0 c 0 0 0 0 0 0 0 23.8095 52.381 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 14.2857 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 61.9048 14.2857 0 100 23.8095 0 4.7619 0 0 0

M02075_2.00_rc_shift6 (M02075_2.00_rc)
; positions_6nt_m4 versus M02075_2.00_rc; m=154/257; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.551387; ------GTmRTwAA--- ; cor=; Ncor= a 0 0 0 0 0 0 25 0.0332889 58.0219 74.1302 3.25387 41.9137 99.9001 92.2043 0 0 0 c 0 0 0 0 0 0 5.03992 16.6778 41.9137 0.0322165 0.0322165 0.0322165 0.0332889 3.87865 0 0 0 g 0 0 0 0 0 0 69.9102 0.0332889 0.0322165 25.8054 0.0322165 0.0322165 0.0332889 0.0384025 0 0 0 t 0 0 0 0 0 0 0.0499002 83.2557 0.0322165 0.0322165 96.6817 58.0219 0.0332889 3.87865 0 0 0

M03013_2.00_shift3 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1)
; positions_6nt_m4 versus M03013_2.00 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1); m=155/257; ncol2=13; w=-3; offset=-3; strand=D; shift=3; score=0.549765; ---AarTAAAyAAAcA- ; cor=; Ncor= a 0 0 0 73.4538 57.435 40.9533 18.8141 89.0191 95.3104 95.8486 0.412939 98.3975 94.685 88.5548 10.9282 84.7826 0 c 0 0 0 4.83584 10.9879 3.07306 8.10608 9.99383 1.75033 0.265692 36.373 1.2956 1.73885 2.51611 63.3311 4.58284 0 g 0 0 0 15.831 8.59619 49.5453 0.875657 0.771129 1.0568 3.65327 0.275292 0.306853 1.70604 3.28322 4.47663 6.46298 0 t 0 0 0 5.87936 22.9809 6.42835 72.2042 0.215916 1.88243 0.232481 62.9387 0 1.87008 5.6459 21.264 4.17156 0

M06352_2.00_rc_shift7 (OTP,SEBOX_rc)
; positions_6nt_m4 versus M06352_2.00_rc (OTP,SEBOX_rc); m=156/257; ncol2=8; w=0; offset=1; strand=R; shift=7; score=0.549674; -------yAATwAww-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 80 100 0 56.6667 73.3333 43.3333 26.6667 0 0 c 0 0 0 0 0 0 0 50 20 0 0 0 0 10 13.3333 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 3.33333 6.66667 20 0 0 t 0 0 0 0 0 0 0 50 0 0 100 43.3333 23.3333 40 40 0 0

M09193_2.00_rc_shift3 (M09193_2.00_rc)
; positions_6nt_m4 versus M09193_2.00_rc; m=157/257; ncol2=12; w=-3; offset=-3; strand=R; shift=3; score=0.545891; ---arrGymATAAAa-- ; cor=; Ncor= a 0 0 0 56 47.6 40.6 14.6 4 42.2 92.4 1.6 92.8 97.8 96.2 59 0 0 c 0 0 0 12.2 16 4 6.2 56.2 46 1.2 1.6 2 0.2 1.2 13 0 0 g 0 0 0 22.6 25 43 75.4 1.2 0.6 6.2 1.8 1.8 1.2 0.8 16.2 0 0 t 0 0 0 9.2 11.4 12.4 3.8 38.6 11.2 0.2 95 3.4 0.8 1.8 11.8 0 0

M00427_2.00_rc_shift5 (M00427_2.00_rc)
; positions_6nt_m4 versus M00427_2.00_rc; m=158/257; ncol2=9; w=-1; offset=-1; strand=R; shift=5; score=0.545842; -----grymATwaa--- ; cor=; Ncor= a 0 0 0 0 0 24.48 25.0152 10.3358 44.5757 74.2688 10.0026 47.7017 58.549 52.1553 0 0 0 c 0 0 0 0 0 21.4958 21.7472 39.473 32.6939 6.40892 4.31822 15.2559 9.20608 14.6469 0 0 0 g 0 0 0 0 0 30.504 39.2316 7.43067 7.59271 17.7732 2.34631 3.76206 11.1324 16.35 0 0 0 t 0 0 0 0 0 23.5202 14.006 42.7605 15.1377 1.54913 83.3329 33.2803 21.1125 16.8479 0 0 0

M03143_2.00_rc_shift5 (HOXC5,HOXC6,MNX1,NANOGP8,NKX1-1,NKX1-2,OTP,SEBOX_rc)
; positions_6nt_m4 versus M03143_2.00_rc (HOXC5,HOXC6,MNX1,NANOGP8,NKX1-1,NKX1-2,OTP,SEBOX_rc); m=159/257; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.545515; -----dsyAATTAaa-- ; cor=; Ncor= a 0 0 0 0 0 34.918 20.8197 0.161812 77.5095 94.4272 1.21029 16.7464 100 52.381 43.2079 0 0 c 0 0 0 0 0 4.09836 27.377 35.1133 15.3748 5.57276 6.5053 2.51196 0 8.867 20.1309 0 0 g 0 0 0 0 0 35.082 31.3115 1.13269 0 0 0 7.77512 0 18.3908 17.8396 0 0 t 0 0 0 0 0 25.9016 20.4918 63.5922 7.11563 0 92.2844 72.9665 0 20.3612 18.8216 0 0

M08247_2.00_shift5 (ZNF382)
; positions_6nt_m4 versus M08247_2.00 (ZNF382); m=160/257; ncol2=15; w=-1; offset=-1; strand=D; shift=5; score=0.545175; -----rrwaaTAACAaa ; cor=; Ncor= a 0 0 0 0 0 33.7112 34.6917 43.076 58.4365 58.8759 9.2445 78.859 73.6795 7.2521 81.82 60.2134 52.891 c 0 0 0 0 0 23.0952 23.66 12.7142 9.0103 22.5679 9.9022 6.1146 3.3459 71.6451 7.9698 14.6187 14.3881 g 0 0 0 0 0 28.3201 25.7019 18.7102 16.4494 8.9009 10.0062 8.2326 9.3642 6.4979 3.0246 9.7926 19.0483 t 0 0 0 0 0 14.8735 15.9462 25.4997 16.1038 9.6554 70.847 6.7939 13.6104 14.6049 7.1856 15.3754 13.6727

M01107_2.00_shift7 (M01107_2.00)
; positions_6nt_m4 versus M01107_2.00; m=161/257; ncol2=8; w=0; offset=1; strand=D; shift=7; score=0.545082; -------aAawwAww-- ; cor=; Ncor= a 0 0 0 0 0 0 0 62.5139 68.9816 66.0471 52.4467 52.5023 76.1535 59.0061 34.2342 0 0 c 0 0 0 0 0 0 0 1.48496 7.95531 3.00527 2.77263 3.1609 4.77193 5.04118 2.78215 0 0 g 0 0 0 0 0 0 0 17.9105 10.9555 6.89205 3.5247 3.03696 4.44932 4.21075 4.82217 0 0 t 0 0 0 0 0 0 0 18.0905 12.1077 24.0556 41.256 41.2998 14.6253 31.742 58.1615 0 0

M06273_2.00_rc_shift7 (HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M06273_2.00_rc (HOXC5,HOXC6_rc); m=162/257; ncol2=8; w=0; offset=1; strand=R; shift=7; score= 0.5447; -------YMATTAAr-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 70 100 0 15 100 100 45 0 0 c 0 0 0 0 0 0 0 30 30 0 0 0 0 0 15 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 t 0 0 0 0 0 0 0 70 0 0 100 85 0 0 15 0 0

M06499_2.00_rc_shift7 (HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M06499_2.00_rc (HOXC5,HOXC6_rc); m=163/257; ncol2=8; w=0; offset=1; strand=R; shift=7; score= 0.5447; -------YMATTAAr-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 70 100 0 15 100 100 45 0 0 c 0 0 0 0 0 0 0 30 30 0 0 0 0 0 15 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 t 0 0 0 0 0 0 0 70 0 0 100 85 0 0 15 0 0

M01106_2.00_shift7 (M01106_2.00)
; positions_6nt_m4 versus M01106_2.00; m=164/257; ncol2=8; w=0; offset=1; strand=D; shift=7; score=0.542189; -------aawwwAww-- ; cor=; Ncor= a 0 0 0 0 0 0 0 48.3861 55.0968 56.1595 51.3647 59.7236 76.3937 58.2011 38.0653 0 0 c 0 0 0 0 0 0 0 9.20009 14.0005 5.86027 4.01064 3.7424 3.69101 0.774067 2.03258 0 0 g 0 0 0 0 0 0 0 21.525 16.7616 11.4524 6.95145 3.09481 3.37333 2.78404 0.203784 0 0 t 0 0 0 0 0 0 0 20.8888 14.1412 26.5279 37.6733 33.4392 16.542 38.2408 59.6983 0 0

M09173_2.00_rc_shift3 (HOXC5,NANOGP8,NKX1-1,NKX1-2,TLX1_rc)
; positions_6nt_m4 versus M09173_2.00_rc (HOXC5,NANOGP8,NKX1-1,NKX1-2,TLX1_rc); m=165/257; ncol2=12; w=-3; offset=-3; strand=R; shift=3; score=0.541853; ---rrrGymATAAAa-- ; cor=; Ncor= a 0 0 0 43.8 38.4 42.4 17 0.8 46.4 96.2 0.2 85.6 98.2 93.4 52.8 0 0 c 0 0 0 15 18.4 4.4 8.6 59.6 45.6 0 0 6.4 0.8 1.4 17.2 0 0 g 0 0 0 26.8 32 31 71.4 0.6 0.4 3.4 0.2 5.8 0.2 4.4 21.6 0 0 t 0 0 0 14.4 11.2 22.2 3 39 7.6 0.4 99.6 2.2 0.8 0.8 8.4 0 0

M10572_2.00_shift7 (FOXS1)
; positions_6nt_m4 versus M10572_2.00 (FOXS1); m=166/257; ncol2=12; w=0; offset=1; strand=D; shift=7; score=0.541799; -------AwATAAACAw ; cor=; Ncor= a 0 0 0 0 0 0 0 78.5714 50 71.4286 0 100 100 100 0 85.7143 57.1429 c 0 0 0 0 0 0 0 0 14.2857 21.4286 7.14286 0 0 0 100 0 0 g 0 0 0 0 0 0 0 14.2857 0 7.14286 0 0 0 0 0 0 14.2857 t 0 0 0 0 0 0 0 7.14286 35.7143 0 92.8571 0 0 0 0 14.2857 28.5714

M00447_2.00_rc_shift5 (M00447_2.00_rc)
; positions_6nt_m4 versus M00447_2.00_rc; m=167/257; ncol2=9; w=-1; offset=-1; strand=R; shift=5; score=0.53906; -----grymATwaa--- ; cor=; Ncor= a 0 0 0 0 0 24.4899 25.7031 9.83479 42.1201 69.7472 6.45151 52.7099 56.9509 52.035 0 0 0 c 0 0 0 0 0 22.1594 20.8345 41.0966 31.2033 6.52002 4.03221 11.7612 9.79811 15.6726 0 0 0 g 0 0 0 0 0 30.5164 39.9094 7.97193 7.17444 21.8648 0.00950739 3.2375 10.0965 13.9004 0 0 0 t 0 0 0 0 0 22.8343 13.553 41.0966 19.5021 1.86802 89.5068 32.2915 23.1545 18.392 0 0 0

M09130_2.00_shift7 (HOXA9,HOXC5,HOXC6)
; positions_6nt_m4 versus M09130_2.00 (HOXA9,HOXC5,HOXC6); m=168/257; ncol2=12; w=0; offset=1; strand=D; shift=7; score=0.538849; -------wCATAAAyyr ; cor=; Ncor= a 0 0 0 0 0 0 0 30.7692 9.89011 100 0 90.1099 100 91.2088 9.89011 10.989 60.4396 c 0 0 0 0 0 0 0 9.89011 80.2198 0 0 0 0 0 30.7692 39.5604 9.89011 g 0 0 0 0 0 0 0 17.5824 0 0 0 0 0 0 8.79121 9.89011 29.6703 t 0 0 0 0 0 0 0 41.7582 9.89011 0 100 9.89011 0 8.79121 50.5495 39.5604 0

M09170_2.00_shift7 (HOXC6)
; positions_6nt_m4 versus M09170_2.00 (HOXC6); m=169/257; ncol2=12; w=0; offset=1; strand=D; shift=7; score=0.538849; -------wCATAAAyyr ; cor=; Ncor= a 0 0 0 0 0 0 0 30.7692 9.89011 100 0 90.1099 100 91.2088 9.89011 10.989 60.4396 c 0 0 0 0 0 0 0 9.89011 80.2198 0 0 0 0 0 30.7692 39.5604 9.89011 g 0 0 0 0 0 0 0 17.5824 0 0 0 0 0 0 8.79121 9.89011 29.6703 t 0 0 0 0 0 0 0 41.7582 9.89011 0 100 9.89011 0 8.79121 50.5495 39.5604 0

M00474_2.00_rc_shift5 (M00474_2.00_rc)
; positions_6nt_m4 versus M00474_2.00_rc; m=170/257; ncol2=9; w=-1; offset=-1; strand=R; shift=5; score=0.53025; -----gvymrtwaa--- ; cor=; Ncor= a 0 0 0 0 0 24.5353 25.5458 18.9608 28.7651 42.1678 18.2144 46.128 57.3117 51.9248 0 0 0 c 0 0 0 0 0 22.4235 25.8026 27.1771 38.8288 11.9611 17.1537 11.375 13.3099 14.7287 0 0 0 g 0 0 0 0 0 28.5059 33.4641 15.6798 14.4279 33.1704 12.5813 13.0844 13.4436 13.0632 0 0 0 t 0 0 0 0 0 24.5353 15.1875 38.1823 17.9782 12.7007 52.0505 29.4125 15.9348 20.2833 0 0 0

M06372_2.00_rc_shift7 (HOXC6,NKX1-1,NKX1-2_rc)
; positions_6nt_m4 versus M06372_2.00_rc (HOXC6,NKX1-1,NKX1-2_rc); m=171/257; ncol2=8; w=0; offset=1; strand=R; shift=7; score=0.529694; -------CWATTAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 68 92 0 12 100 92 60 0 0 c 0 0 0 0 0 0 0 88 4 0 0 0 0 4 16 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 4 16 0 0 t 0 0 0 0 0 0 0 12 28 8 100 88 0 0 8 0 0

M06550_2.00_rc_shift7 (DBX1,DBX2,HLX_rc)
; positions_6nt_m4 versus M06550_2.00_rc (DBX1,DBX2,HLX_rc); m=172/257; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.52726; -------TmATwAA--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 50 100 0 50 87.5 87.5 0 0 0 c 0 0 0 0 0 0 0 18.75 37.5 0 0 12.5 0 0 0 0 0 g 0 0 0 0 0 0 0 0 12.5 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 81.25 0 0 100 37.5 12.5 12.5 0 0 0

M06369_2.00_rc_shift7 (OTP,SEBOX_rc)
; positions_6nt_m4 versus M06369_2.00_rc (OTP,SEBOX_rc); m=173/257; ncol2=8; w=0; offset=1; strand=R; shift=7; score=0.527255; -------YAATwAaa-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.452233 81.7976 94.234 0.0565291 29.9039 80.4975 48.1628 33.1826 0 0 c 0 0 0 0 0 0 0 27.1905 13.9062 4.52233 0.791408 3.61786 0.734878 13.3409 19.6156 0 0 g 0 0 0 0 0 0 0 0.169587 2.14811 1.01752 0.0565291 0.734878 2.99604 20.1244 23.5161 0 0 t 0 0 0 0 0 0 0 72.1877 2.14811 0.226116 99.0955 65.7434 15.7716 18.372 23.6857 0 0

M00421_2.00_rc_shift6 (HOXC6_rc)
; positions_6nt_m4 versus M00421_2.00_rc (HOXC6_rc); m=174/257; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.526227; ------gTmATwAA--- ; cor=; Ncor= a 0 0 0 0 0 0 20.6926 1.18768 37.3687 83.3105 9.80988 33.3301 97.9503 91.1058 0 0 0 c 0 0 0 0 0 0 17.2467 21.1783 57.5626 1.96982 0.00980008 0.00980008 0.0100969 2.54302 0 0 0 g 0 0 0 0 0 0 55.1516 3.53951 0.0100969 14.7099 0.00980008 0.00980008 0.0100969 0.0126518 0 0 0 t 0 0 0 0 0 0 6.90903 74.0945 5.05856 0.00980008 90.1705 66.6503 2.02948 6.33856 0 0 0

M01667_2.00_shift7 (ARID3B,ARID3C)
; positions_6nt_m4 versus M01667_2.00 (ARID3B,ARID3C); m=175/257; ncol2=8; w=0; offset=1; strand=D; shift=7; score=0.525958; -------yrATyaaa-- ; cor=; Ncor= a 0 0 0 0 0 0 0 24.5252 30.832 94.1882 5.17629 19.1668 56.2171 50.2612 41.6728 0 0 c 0 0 0 0 0 0 0 27.1045 19.6593 0.0248548 3.50464 30.9749 10.0666 15.9145 14.8775 0 0 g 0 0 0 0 0 0 0 21.5355 25.4968 0.0593262 0.0248248 8.87446 16.2683 17.5883 23.567 0 0 t 0 0 0 0 0 0 0 26.8348 24.012 5.72759 91.2942 40.9838 17.4479 16.236 19.8827 0 0

M01108_2.00_shift7 (M01108_2.00)
; positions_6nt_m4 versus M01108_2.00; m=176/257; ncol2=8; w=0; offset=1; strand=D; shift=7; score=0.525605; -------waawwAww-- ; cor=; Ncor= a 0 0 0 0 0 0 0 42.3349 53.6851 59.1376 50.1697 57.7953 85.2706 52.0642 27.9377 0 0 c 0 0 0 0 0 0 0 12.4985 10.731 5.31146 3.50928 2.99489 2.84576 1.48065 6.82081 0 0 g 0 0 0 0 0 0 0 19.9976 18.4144 11.0217 4.83273 1.98756 1.85119 3.82852 6.68575 0 0 t 0 0 0 0 0 0 0 25.169 17.1695 24.5293 41.4883 37.2223 10.0325 42.6266 58.5557 0 0

M06275_2.00_rc_shift7 (HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M06275_2.00_rc (HOXC5,HOXC6_rc); m=177/257; ncol2=8; w=0; offset=1; strand=R; shift=7; score=0.525495; -------YmATWAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 0 2.25564 43.985 91.3534 0 25.188 96.9925 79.3233 44.7368 0 0 c 0 0 0 0 0 0 0 26.3158 48.8722 0 1.12782 0 0.75188 3.00752 18.4211 0 0 g 0 0 0 0 0 0 0 0 1.50376 8.64662 0 0 0 6.76692 16.9173 0 0 t 0 0 0 0 0 0 0 71.4286 5.6391 0 98.8722 74.812 2.25564 10.9023 19.9248 0 0

M01664_2.00_shift7 (ARID3B,ARID3C)
; positions_6nt_m4 versus M01664_2.00 (ARID3B,ARID3C); m=178/257; ncol2=8; w=0; offset=1; strand=D; shift=7; score=0.52439; -------ywATyaaa-- ; cor=; Ncor= a 0 0 0 0 0 0 0 22.7052 36.4833 95.4295 0.322618 18.0785 60.1595 50.0975 40.0462 0 0 c 0 0 0 0 0 0 0 26.9126 11.2105 0.0149714 2.20056 42.2972 7.14919 14.6431 14.8803 0 0 g 0 0 0 0 0 0 0 20.3401 24.4555 0.0360946 0.0879235 6.0178 18.8592 17.0129 22.1987 0 0 t 0 0 0 0 0 0 0 30.042 27.8506 4.51944 97.3889 33.6065 13.8322 18.2465 22.8748 0 0

M00436_2.00_rc_shift6 (HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M00436_2.00_rc (HOXC5,HOXC6_rc); m=179/257; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.52016; ------gymatwaa--- ; cor=; Ncor= a 0 0 0 0 0 0 24.3036 18.7831 30.688 57.7296 17.1082 32.5762 52.4827 37.6344 0 0 0 c 0 0 0 0 0 0 21.772 39.3682 34.6006 12.3761 12.8015 12.5986 15.6502 21.9314 0 0 0 g 0 0 0 0 0 0 35.1851 12.9742 17.1822 20.817 10.3767 9.0574 12.9421 18.5028 0 0 0 t 0 0 0 0 0 0 18.7393 28.8745 17.5293 9.07724 59.7136 45.7679 18.925 21.9314 0 0 0

M06202_2.00_shift2 (FOXP4)
; positions_6nt_m4 versus M06202_2.00 (FOXP4); m=180/257; ncol2=14; w=-4; offset=-4; strand=D; shift=2; score=0.518918; --aarrbyAAAAAAAt- ; cor=; Ncor= a 0 0 59.0909 54.5455 36.3636 45.4545 9.09091 4.54545 90.9091 100 100 100 100 100 100 18.1818 0 c 0 0 18.1818 13.6364 13.6364 22.7273 36.3636 40.9091 0 0 0 0 0 0 0 4.54545 0 g 0 0 22.7273 18.1818 36.3636 27.2727 27.2727 18.1818 9.09091 0 0 0 0 0 0 18.1818 0 t 0 0 0 13.6364 13.6364 4.54545 27.2727 36.3636 0 0 0 0 0 0 0 59.0909 0

M03179_2.00_shift6 (LMX1A,OTP,SEBOX)
; positions_6nt_m4 versus M03179_2.00 (LMX1A,OTP,SEBOX); m=181/257; ncol2=8; w=0; offset=0; strand=D; shift=6; score=0.518615; ------tTAATTAa--- ; cor=; Ncor= a 0 0 0 0 0 0 13.0477 7.19539 83.4835 96.8948 2.70778 12.1113 81.4272 54.7327 0 0 0 c 0 0 0 0 0 0 23.1687 16.5727 5.11876 0.681242 0.98607 4.89739 1.6376 13.7486 0 0 0 g 0 0 0 0 0 0 19.7515 1.26256 5.92411 0.522814 0.57912 5.9927 11.6895 22.1187 0 0 0 t 0 0 0 0 0 0 44.032 74.9694 5.47366 1.90114 95.727 76.9986 5.24564 9.40003 0 0 0

M06538_2.00_rc_shift7 (OTP,SEBOX_rc)
; positions_6nt_m4 versus M06538_2.00_rc (OTP,SEBOX_rc); m=182/257; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.517675; -------yAATwAw--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 80 100 0 56.6667 73.3333 43.3333 0 0 0 c 0 0 0 0 0 0 0 50 20 0 0 0 0 10 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 3.33333 6.66667 0 0 0 t 0 0 0 0 0 0 0 50 0 0 100 43.3333 23.3333 40 0 0 0

M01687_2.00_shift6 (M01687_2.00)
; positions_6nt_m4 versus M01687_2.00; m=183/257; ncol2=8; w=0; offset=0; strand=D; shift=6; score=0.517662; ------AAAWTAAT--- ; cor=; Ncor= a 0 0 0 0 0 0 83.9058 88.161 83.2686 69.3951 16.6759 83.2686 76.4101 18.5281 0 0 0 c 0 0 0 0 0 0 0.0399361 0.0293772 0.0277469 0.0277469 0.0277469 0.0277469 2.9671 3.73521 0 0 0 g 0 0 0 0 0 0 12.0208 0.0293772 0.0277469 0.0277469 0.0277469 0.0277469 0.0293772 0.0369822 0 0 0 t 0 0 0 0 0 0 4.03355 11.7803 16.6759 30.5494 83.2686 16.6759 20.5934 77.6997 0 0 0

M10748_2.00_rc_shift5 (PBX1_rc)
; positions_6nt_m4 versus M10748_2.00_rc (PBX1_rc); m=184/257; ncol2=9; w=-1; offset=-1; strand=R; shift=5; score=0.517007; -----AyyAATmAw--- ; cor=; Ncor= a 0 0 0 0 0 75 18.75 6.25 81.25 87.5 12.5 25 87.5 62.5 0 0 0 c 0 0 0 0 0 6.25 25 56.25 6.25 0 0 62.5 0 0 0 0 0 g 0 0 0 0 0 0 6.25 12.5 0 0 0 0 6.25 0 0 0 0 t 0 0 0 0 0 18.75 50 25 12.5 12.5 87.5 12.5 6.25 37.5 0 0 0

M03046_2.00_shift9 (FOXI2,FOXI3,FOXJ3)
; positions_6nt_m4 versus M03046_2.00 (FOXI2,FOXI3,FOXJ3); m=185/257; ncol2=8; w=0; offset=3; strand=D; shift=9; score=0.516993; ---------rTAAAcAA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 45.3438 12.9527 91.046 92.2151 90.047 23.4165 99.3945 70.5774 c 0 0 0 0 0 0 0 0 0 0 4.91099 3.56577 0.963082 0 55.1344 0 9.09091 g 0 0 0 0 0 0 0 0 0 54.6562 11.6022 3.09033 2.16693 4.62382 14.3954 0.605536 7.55528 t 0 0 0 0 0 0 0 0 0 0 70.5341 2.29794 4.6549 5.32915 7.05374 0 12.7764

M06373_2.00_rc_shift7 (HOXC6,NKX1-1,NKX1-2_rc)
; positions_6nt_m4 versus M06373_2.00_rc (HOXC6,NKX1-1,NKX1-2_rc); m=186/257; ncol2=8; w=0; offset=1; strand=R; shift=7; score=0.515742; -------yaATTAAa-- ; cor=; Ncor= a 0 0 0 0 0 0 0 1.90476 53.545 76.5079 0 20.5291 100 68.8889 39.6825 0 0 c 0 0 0 0 0 0 0 59.1534 17.3545 2.22222 0 0 0 5.71429 22.4339 0 0 g 0 0 0 0 0 0 0 0 5.60847 6.24339 0 0 0 16.0847 22.328 0 0 t 0 0 0 0 0 0 0 38.9418 23.4921 15.0265 100 79.4709 0 9.31217 15.5556 0 0

M00391_2.00_rc_shift5 (HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M00391_2.00_rc (HOXC5,HOXC6_rc); m=187/257; ncol2=9; w=-1; offset=-1; strand=R; shift=5; score=0.513239; -----kgymatwaa--- ; cor=; Ncor= a 0 0 0 0 0 22.9617 23.2602 17.2564 34.862 57.617 17.4107 33.3467 54.8166 40.9599 0 0 0 c 0 0 0 0 0 22.507 23.0288 34.7501 33.1617 11.9869 13.1587 12.8965 13.9293 19.9373 0 0 0 g 0 0 0 0 0 28.8996 36.4793 14.2703 16.4676 20.7764 12.7698 11.7866 15.5489 18.965 0 0 0 t 0 0 0 0 0 25.6317 17.2316 33.7231 15.5086 9.61974 56.6608 41.9702 15.7052 20.1377 0 0 0

M05001_2.00_rc_shift6 (HOXB6,HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M05001_2.00_rc (HOXB6,HOXC5,HOXC6_rc); m=188/257; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.511578; ------gymATwAa--- ; cor=; Ncor= a 0 0 0 0 0 0 21.4308 0.796701 56.0765 87.3471 3.6541 26.6818 80.9339 45.1019 0 0 0 c 0 0 0 0 0 0 15.5562 47.6635 30.1427 6.28286 0 1.87452 0.349886 17.9597 0 0 0 g 0 0 0 0 0 0 52.052 0 3.55897 4.28878 0 3.97676 10.2355 22.9851 0 0 0 t 0 0 0 0 0 0 10.961 51.5398 10.2219 2.08122 96.3459 67.4669 8.48069 13.9532 0 0 0

M06301_2.00_rc_shift7 (NKX1-1,NKX1-2,OTP,SEBOX_rc)
; positions_6nt_m4 versus M06301_2.00_rc (NKX1-1,NKX1-2,OTP,SEBOX_rc); m=189/257; ncol2=8; w=0; offset=1; strand=R; shift=7; score=0.510504; -------YAATTAaa-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 100 100 0 3.57143 96.4286 67.8571 46.4286 0 0 c 0 0 0 0 0 0 0 25 0 0 0 0 0 14.2857 21.4286 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 14.2857 10.7143 0 0 t 0 0 0 0 0 0 0 75 0 0 100 96.4286 3.57143 3.57143 21.4286 0 0

M09677_2.00_rc_shift6 (HOXC5,NKX1-1,NKX1-2,OTP,SEBOX_rc)
; positions_6nt_m4 versus M09677_2.00_rc (HOXC5,NKX1-1,NKX1-2,OTP,SEBOX_rc); m=190/257; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.509169; ------cyAATTAa--- ; cor=; Ncor= a 0 0 0 0 0 0 14.3763 6.69643 88.9913 96.503 0.372024 2.08333 90.997 53.9305 0 0 0 c 0 0 0 0 0 0 43.4136 38.7487 7.58605 2.15774 0.372024 10.7143 1.11607 7.67016 0 0 0 g 0 0 0 0 0 0 24.9741 2.52976 1.71131 0.372024 0.967262 2.97619 1.11607 16.5211 0 0 0 t 0 0 0 0 0 0 17.236 52.0251 1.71131 0.967262 98.2887 84.2262 6.77083 21.8782 0 0 0

M09152_2.00_rc_shift3 (CDX2_rc)
; positions_6nt_m4 versus M09152_2.00_rc (CDX2_rc); m=191/257; ncol2=12; w=-3; offset=-3; strand=R; shift=3; score=0.506898; ---amwGCmATaAAa-- ; cor=; Ncor= a 0 0 0 58.2781 31.1258 43.7086 9.27152 0 64.2384 92.7152 0 49.6689 82.7815 80.7947 51.6556 0 0 c 0 0 0 17.2185 35.0993 8.60927 13.245 80.7947 31.1258 1.3245 0.662252 17.2185 6.62252 5.96026 21.1921 0 0 g 0 0 0 23.1788 19.8675 21.1921 76.1589 0.662252 0 5.29801 0.662252 24.5033 0 7.28477 11.9205 0 0 t 0 0 0 1.3245 13.9073 26.4901 1.3245 18.543 4.63576 0.662252 98.6755 8.60927 10.596 5.96026 15.2318 0 0

M06489_2.00_rc_shift7 (DBX1,DBX2,HLX_rc)
; positions_6nt_m4 versus M06489_2.00_rc (DBX1,DBX2,HLX_rc); m=192/257; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.50412; -------ThATwAa--- ; cor=; Ncor= a 0 0 0 0 0 0 0 3.125 46.875 100 3.125 43.75 90.625 59.375 0 0 0 c 0 0 0 0 0 0 0 21.875 28.125 0 0 3.125 0 12.5 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 3.125 3.125 9.375 0 0 0 t 0 0 0 0 0 0 0 75 25 0 96.875 50 6.25 18.75 0 0 0

M00477_2.00_rc_shift5 (HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M00477_2.00_rc (HOXC5,HOXC6_rc); m=193/257; ncol2=9; w=-1; offset=-1; strand=R; shift=5; score=0.502827; -----ggymatwaa--- ; cor=; Ncor= a 0 0 0 0 0 24.9294 24.1345 18.7621 36.4827 62.9137 19.8235 31.0419 61.7893 38.7129 0 0 0 c 0 0 0 0 0 21.0321 21.6205 31.2444 30.7792 5.32155 6.53301 7.42861 5.66174 17.5697 0 0 0 g 0 0 0 0 0 29.8459 36.0045 17.1473 19.0457 21.3652 18.6691 17.0362 19.5648 24.6844 0 0 0 t 0 0 0 0 0 24.1926 18.2405 32.8463 13.6924 10.3996 54.9744 44.4933 12.9842 19.033 0 0 0

M00499_2.00_rc_shift6 (DBX1,DBX2,HLX_rc)
; positions_6nt_m4 versus M00499_2.00_rc (DBX1,DBX2,HLX_rc); m=194/257; ncol2=7; w=0; offset=0; strand=R; shift=6; score=0.498721; ------byaatwa---- ; cor=; Ncor= a 0 0 0 0 0 0 18.0902 17.5178 38.8597 66.7958 21.3722 30.0299 48.6211 0 0 0 0 c 0 0 0 0 0 0 25.4159 36.3509 20.4904 13.0873 14.7625 16.8137 14.9402 0 0 0 0 g 0 0 0 0 0 0 29.2352 13.2397 24.5315 5.93959 8.60284 18.9574 15.8641 0 0 0 0 t 0 0 0 0 0 0 27.2587 32.8916 16.1183 14.1773 55.2624 34.1989 20.5746 0 0 0 0

M10571_2.00_shift5 (FOXS1)
; positions_6nt_m4 versus M10571_2.00 (FOXS1); m=195/257; ncol2=16; w=-1; offset=-1; strand=D; shift=5; score=0.497389; -----wwaarTAAATAk ; cor=; Ncor= a 0 0 0 0 0 44.4444 63.6364 45.4545 66.6667 66.6667 0 100 100 100 0 100 6.66667 c 0 0 0 0 0 22.2222 9.09091 18.1818 8.33333 0 0 0 0 0 20 0 6.66667 g 0 0 0 0 0 0 0 18.1818 16.6667 33.3333 0 0 0 0 0 0 26.6667 t 0 0 0 0 0 33.3333 27.2727 18.1818 8.33333 0 100 0 0 0 80 0 60

M03775_2.00_rc_shift2 (HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M03775_2.00_rc (HOXC5,HOXC6_rc); m=196/257; ncol2=14; w=-4; offset=-4; strand=R; shift=2; score=0.496445; --aAAAsmCATwAAAh- ; cor=; Ncor= a 0 0 62.0758 78.5266 81.8627 81.5961 5.42477 46.9101 0.19685 99.0119 2.11538 62.7639 96.9052 98.2353 75.6798 31 0 c 0 0 9.18164 7.83699 9.47712 2.11726 51.2794 31.0861 98.622 0.197628 1.53846 2.4952 0.193424 0.588235 11.7825 31.6 0 g 0 0 16.3673 6.42633 1.14379 10.5863 32.7533 11.8914 0 0 0 1.34357 0.773694 1.17647 2.87009 8.8 0 t 0 0 12.3752 7.21003 7.51634 5.70033 10.5425 10.1124 1.1811 0.790514 96.3462 33.3973 2.12766 0 9.66767 28.6 0

M06291_2.00_rc_shift6 (HOXC5,NKX1-1,NKX1-2,OTP,SEBOX_rc)
; positions_6nt_m4 versus M06291_2.00_rc (HOXC5,NKX1-1,NKX1-2,OTP,SEBOX_rc); m=197/257; ncol2=7; w=0; offset=0; strand=R; shift=6; score=0.486217; ------TAAWTWA---- ; cor=; Ncor= a 0 0 0 0 0 0 5.88235 70.5882 100 29.4118 0 70.5882 88.2353 0 0 0 0 c 0 0 0 0 0 0 23.5294 17.6471 0 0 0 0 5.88235 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 5.88235 0 0 0 0 t 0 0 0 0 0 0 70.5882 11.7647 0 70.5882 100 29.4118 0 0 0 0 0

M03864_2.00_rc_shift6 (HOXC5,NKX1-1,NKX1-2,OTP,TLX1_rc)
; positions_6nt_m4 versus M03864_2.00_rc (HOXC5,NKX1-1,NKX1-2,OTP,TLX1_rc); m=198/257; ncol2=16; w=0; offset=0; strand=R; shift=6; score=0.485787; ------yyAATwAamyA ; cor=; Ncor= a 0 0 0 0 0 0 7.90395 2.99517 81.7327 93.1532 0.247647 53.977 76.5697 58.95 25.1126 3.29032 84.5309 c 0 0 0 0 0 0 36.3182 55.0725 4.82223 2.7946 0.544824 19.905 4.44104 11.35 41.4207 64.5161 4.3956 g 0 0 0 0 0 0 11.1056 0.434783 5.63956 0.41919 0.148588 0.949743 1.95253 9.65 9.75488 1.41935 1.43702 t 0 0 0 0 0 0 44.6723 41.4976 7.80548 3.63298 99.0589 25.1682 17.0368 20.05 23.7119 30.7742 9.63652

M10558_2.00_shift4 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXL1,FOXS1)
; positions_6nt_m4 versus M10558_2.00 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXL1,FOXS1); m=199/257; ncol2=16; w=-2; offset=-2; strand=D; shift=4; score=0.485496; ----wwdayATAAAyAw ; cor=; Ncor= a 0 0 0 0 30.4348 43.4783 26.087 56.5217 17.3913 91.3043 0 95.6522 100 100 0 91.3043 39.1304 c 0 0 0 0 4.34783 17.3913 13.0435 17.3913 43.4783 0 8.69565 4.34783 0 0 60.8696 4.34783 17.3913 g 0 0 0 0 17.3913 8.69565 26.087 17.3913 8.69565 8.69565 0 0 0 0 0 4.34783 8.69565 t 0 0 0 0 47.8261 30.4348 34.7826 8.69565 30.4348 0 91.3043 0 0 0 39.1304 0 34.7826

M00216_2.00_rc_shift9 (TBPL2_rc)
; positions_6nt_m4 versus M00216_2.00_rc (TBPL2_rc); m=200/257; ncol2=7; w=0; offset=3; strand=R; shift=9; score=0.482326; ---------wTwwaww- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 48.65 1.44887 63.9678 37.1463 51.5031 40.0342 32.36 0 c 0 0 0 0 0 0 0 0 0 10.4296 19.121 6.94748 9.53399 12.3251 11.2429 17.0632 0 g 0 0 0 0 0 0 0 0 0 11.9969 7.85215 0.0533106 0.0769087 12.3251 11.0202 18.8577 0 t 0 0 0 0 0 0 0 0 0 28.9234 71.578 29.0314 53.2428 23.8466 37.7028 31.7192 0

M06472_2.00_shift7 (M06472_2.00)
; positions_6nt_m4 versus M06472_2.00; m=201/257; ncol2=7; w=0; offset=1; strand=D; shift=7; score=0.481437; -------hAATCAA--- ; cor=; Ncor= a 0 0 0 0 0 0 0 40 100 100 0 0 100 80 0 0 0 c 0 0 0 0 0 0 0 26.6667 0 0 0 100 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 13.3333 0 0 0 t 0 0 0 0 0 0 0 33.3333 0 0 100 0 0 6.66667 0 0 0

M00364_2.00_rc_shift6 (POU3F4_rc)
; positions_6nt_m4 versus M00364_2.00_rc (POU3F4_rc); m=202/257; ncol2=7; w=0; offset=0; strand=R; shift=6; score=0.481384; ------ykmAtwa---- ; cor=; Ncor= a 0 0 0 0 0 0 22.7771 20.2943 38.6696 68.5506 14.8432 36.204 37.593 0 0 0 0 c 0 0 0 0 0 0 25.6811 17.8203 29.2258 5.62697 12.1526 11.4635 15.1321 0 0 0 0 g 0 0 0 0 0 0 17.5623 29.0884 16.6941 17.5942 10.3557 10.2694 22.5745 0 0 0 0 t 0 0 0 0 0 0 33.9795 32.7971 15.4106 8.22823 62.6485 42.0631 24.7004 0 0 0 0

M06215_2.00_shift7 (OTP,SEBOX)
; positions_6nt_m4 versus M06215_2.00 (OTP,SEBOX); m=203/257; ncol2=6; w=0; offset=1; strand=D; shift=7; score=0.480864; -------yAAThA---- ; cor=; Ncor= a 0 0 0 0 0 0 0 8.33333 100 100 0 33.3333 91.6667 0 0 0 0 c 0 0 0 0 0 0 0 33.3333 0 0 8.33333 25 0 0 0 0 0 g 0 0 0 0 0 0 0 16.6667 0 0 8.33333 8.33333 8.33333 0 0 0 0 t 0 0 0 0 0 0 0 41.6667 0 0 83.3333 33.3333 0 0 0 0 0

M09680_2.00_rc_shift7 (HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M09680_2.00_rc (HOXC5,HOXC6_rc); m=204/257; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.479503; -------ymATTAA--- ; cor=; Ncor= a 0 0 0 0 0 0 0 11.0101 52.4874 97.1591 0.568182 18.3523 87.6515 72.3295 0 0 0 c 0 0 0 0 0 0 0 40.7576 38.1187 0.94697 0.94697 2.72096 3.73737 5.15783 0 0 0 g 0 0 0 0 0 0 0 5.25253 3.95202 1.32576 0.568182 0.852273 1.51515 12.3043 0 0 0 t 0 0 0 0 0 0 0 42.9798 5.44192 0.568182 97.9167 78.0745 7.09596 10.2083 0 0 0

M08960_2.00_rc_shift3 (ZNF350_rc)
; positions_6nt_m4 versus M08960_2.00_rc (ZNF350_rc); m=205/257; ncol2=18; w=-3; offset=-3; strand=R; shift=3; score=0.474161; ---twgGwmatAAAArr ; cor=; Ncor= a 0 0 0 19.8 37.2 23.4 16.4 25.4 25.8 65.6 17.2 77.6 94.8 96.4 76.6 36.4 30.4 c 0 0 0 24.2 11 5.6 10.6 8.6 43.4 7.6 11.8 6.2 1.8 1.6 1.8 5.4 5.6 g 0 0 0 13.2 19.6 67 68.2 18.2 6.4 3.6 19 11.2 2.8 1.8 14 53.4 57.4 t 0 0 0 42.8 32.2 4 4.8 47.8 24.4 23.2 52 5 0.6 0.2 7.6 4.8 6.6

M07765_2.00_rc_shift0 (ZNF492_rc)
; positions_6nt_m4 versus M07765_2.00_rc (ZNF492_rc); m=206/257; ncol2=18; w=-6; offset=-6; strand=R; shift=0; score=0.473758; amAARArcAmyAAAAAG ; cor=; Ncor= a 65.0267 45.2293 71.1871 69.9749 25.0249 94.2682 35.6812 22.5508 95.7834 57.8531 12.2473 96.3895 87.6012 99.7727 99.7727 69.9251 4.97422 c 17.1955 27.499 3.71229 3.40925 0.075761 1.89403 7.34882 61.4897 0.681849 28.9147 41.0365 1.59098 2.50011 0.075761 0.075761 1.94378 0.075761 g 11.9442 14.6716 8.91379 18.5614 74.8236 0.681849 56.8943 12.8534 2.80316 13.1564 14.1153 0.681849 9.21683 0.075761 0.075761 24.4188 94.8743 t 5.8336 12.6001 16.1868 8.05441 0.075761 3.15595 0.075761 3.1062 0.7316 0.075761 32.601 1.33769 0.681849 0.075761 0.075761 3.71229 0.075761

M00366_2.00_rc_shift6 (POU3F4_rc)
; positions_6nt_m4 versus M00366_2.00_rc (POU3F4_rc); m=207/257; ncol2=7; w=0; offset=0; strand=R; shift=6; score=0.468014; ------ykmaTww---- ; cor=; Ncor= a 0 0 0 0 0 0 21.3714 21.1802 34.5888 66.772 13.6384 41.6191 40.8076 0 0 0 0 c 0 0 0 0 0 0 25.8434 11.978 40.5903 4.39859 6.37822 9.37981 17.0964 0 0 0 0 g 0 0 0 0 0 0 14.6151 39.3725 12.3484 12.1981 5.32754 11.3425 16.5911 0 0 0 0 t 0 0 0 0 0 0 38.1702 27.4693 12.4725 16.6313 74.6559 37.6585 25.5048 0 0 0 0

M11388_2.00_shift7 (TBP,TBPL2)
; positions_6nt_m4 versus M11388_2.00 (TBP,TBPL2); m=208/257; ncol2=15; w=0; offset=1; strand=D; shift=7; score=0.464341; -------sTATAWAwrs ; cor=; Ncor= a 0 0 0 0 0 0 0 15.6812 4.11311 90.4884 0.771208 91.0026 68.8946 92.545 57.0694 39.8458 14.3959 c 0 0 0 0 0 0 0 37.2751 11.8252 0 2.57069 0 0 0.771208 0.514139 11.3111 34.7044 g 0 0 0 0 0 0 0 39.0746 4.62725 0.514139 0.514139 1.28535 0 5.14139 11.3111 40.3599 38.5604 t 0 0 0 0 0 0 0 7.96915 79.4344 8.99743 96.144 7.71208 31.1054 1.54242 31.1054 8.48329 12.3393

M11491_2.00_shift7 (M11491_2.00)
; positions_6nt_m4 versus M11491_2.00; m=209/257; ncol2=15; w=0; offset=1; strand=D; shift=7; score=0.464341; -------sTATAWAwrs ; cor=; Ncor= a 0 0 0 0 0 0 0 15.6812 4.11311 90.4884 0.771208 91.0026 68.8946 92.545 57.0694 39.8458 14.3959 c 0 0 0 0 0 0 0 37.2751 11.8252 0 2.57069 0 0 0.771208 0.514139 11.3111 34.7044 g 0 0 0 0 0 0 0 39.0746 4.62725 0.514139 0.514139 1.28535 0 5.14139 11.3111 40.3599 38.5604 t 0 0 0 0 0 0 0 7.96915 79.4344 8.99743 96.144 7.71208 31.1054 1.54242 31.1054 8.48329 12.3393

M00365_2.00_shift6 (POU3F4)
; positions_6nt_m4 versus M00365_2.00 (POU3F4); m=210/257; ncol2=7; w=0; offset=0; strand=D; shift=6; score=0.463738; ------tgmatww---- ; cor=; Ncor= a 0 0 0 0 0 0 22.4589 22.08 32.1329 59.7235 20.9486 46.3542 34.4888 0 0 0 0 c 0 0 0 0 0 0 22.9126 13.6627 38.0873 5.41799 8.18311 8.63921 20.0983 0 0 0 0 g 0 0 0 0 0 0 16.4724 41.0452 15.4851 15.1761 10.4028 14.2437 18.553 0 0 0 0 t 0 0 0 0 0 0 38.1561 23.2121 14.2946 19.6824 60.4655 30.763 26.8599 0 0 0 0

M06250_2.00_rc_shift7 (DBX1,DBX2,HLX_rc)
; positions_6nt_m4 versus M06250_2.00_rc (DBX1,DBX2,HLX_rc); m=211/257; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.462693; -------ThWwwwA--- ; cor=; Ncor= a 0 0 0 0 0 0 0 6.25 43.75 75 34.375 40.625 65.625 75 0 0 0 c 0 0 0 0 0 0 0 21.875 28.125 0 0 3.125 0 9.375 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 3.125 3.125 0 0 0 t 0 0 0 0 0 0 0 71.875 28.125 25 65.625 56.25 31.25 12.5 0 0 0

M00360_2.00_shift6 (POU4F3)
; positions_6nt_m4 versus M00360_2.00 (POU4F3); m=212/257; ncol2=7; w=0; offset=0; strand=D; shift=6; score=0.46164; ------tgmataw---- ; cor=; Ncor= a 0 0 0 0 0 0 22.2454 20.8561 32.9493 58.1249 16.4889 50.4778 33.8573 0 0 0 0 c 0 0 0 0 0 0 17.8523 13.7034 40.6489 16.4874 15.3742 8.94894 21.3735 0 0 0 0 g 0 0 0 0 0 0 15.9927 42.8474 12.8709 15.6833 12.8416 17.6641 17.325 0 0 0 0 t 0 0 0 0 0 0 43.9096 22.5931 13.5308 9.70454 55.2953 22.9091 27.4442 0 0 0 0

M06546_2.00_rc_shift7 (OTP,SEBOX_rc)
; positions_6nt_m4 versus M06546_2.00_rc (OTP,SEBOX_rc); m=213/257; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.46022; -------TAATTAA--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 94.7368 94.7368 0 10.5263 89.4737 68.4211 0 0 0 c 0 0 0 0 0 0 0 21.0526 5.26316 5.26316 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 21.0526 0 0 0 t 0 0 0 0 0 0 0 78.9474 0 0 100 89.4737 10.5263 10.5263 0 0 0

M06239_2.00_rc_shift7 (HOXC5,NKX1-1,NKX1-2,OTP,SEBOX_rc)
; positions_6nt_m4 versus M06239_2.00_rc (HOXC5,NKX1-1,NKX1-2,OTP,SEBOX_rc); m=214/257; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.458766; -------yAATTAa--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 78.3751 99.8208 0 12.0669 88.172 49.5818 0 0 0 c 0 0 0 0 0 0 0 40.681 15.4719 0 0 12.6045 0 12.724 0 0 0 g 0 0 0 0 0 0 0 0 0.896057 0 0 0 1.19474 22.4612 0 0 0 t 0 0 0 0 0 0 0 59.319 5.25687 0.179211 100 75.3286 10.6332 15.233 0 0 0

M06548_2.00_rc_shift7 (HOXC6,NKX1-1,NKX1-2_rc)
; positions_6nt_m4 versus M06548_2.00_rc (HOXC6,NKX1-1,NKX1-2_rc); m=215/257; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.458558; -------CWATTAA--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 68 92 0 12 100 92 0 0 0 c 0 0 0 0 0 0 0 88 4 0 0 0 0 4 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 t 0 0 0 0 0 0 0 12 28 8 100 88 0 0 0 0 0

M01567_2.00_shift6 (TBPL2)
; positions_6nt_m4 versus M01567_2.00 (TBPL2); m=216/257; ncol2=7; w=0; offset=0; strand=D; shift=6; score=0.458198; ------wwwwtAw---- ; cor=; Ncor= a 0 0 0 0 0 0 31.5311 34.5705 27.1982 58.3542 21.9565 93.4996 42.2777 0 0 0 0 c 0 0 0 0 0 0 18.9343 14.1966 11.058 0.086859 0.643432 0.0353646 0.0470878 0 0 0 0 g 0 0 0 0 0 0 20.7174 21.1788 15.5359 11.0954 18.8981 5.19636 9.52823 0 0 0 0 t 0 0 0 0 0 0 28.8172 30.0541 46.2079 30.4636 58.502 1.26866 48.147 0 0 0 0

M06302_2.00_rc_shift7 (NKX1-1,NKX1-2,OTP,SEBOX_rc)
; positions_6nt_m4 versus M06302_2.00_rc (NKX1-1,NKX1-2,OTP,SEBOX_rc); m=217/257; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.455411; -------yAATTAa--- ; cor=; Ncor= a 0 0 0 0 0 0 0 1.33983 84.8965 100 0 5.60292 93.7881 63.581 0 0 0 c 0 0 0 0 0 0 0 32.5213 11.3276 0 0 0.852619 0 5.60292 0 0 0 g 0 0 0 0 0 0 0 4.3849 1.58343 0 0 0 2.07065 20.9501 0 0 0 t 0 0 0 0 0 0 0 61.754 2.19245 0 100 93.5445 4.14129 9.86602 0 0 0

M02228_2.00_shift4 (OTP,SEBOX)
; positions_6nt_m4 versus M02228_2.00 (OTP,SEBOX); m=218/257; ncol2=10; w=-2; offset=-2; strand=D; shift=4; score=0.455079; ----wtkTAATwwa--- ; cor=; Ncor= a 0 0 0 0 33.4982 21.0546 13.4708 2.79186 87.2504 97.7176 0.356511 42.4012 59.1052 34.5635 0 0 0 c 0 0 0 0 17.8409 23.739 24.5455 20.2207 7.83642 0.972468 0.90358 7.07931 3.09355 19.743 0 0 0 g 0 0 0 0 20.1155 19.4359 28.5178 1.29267 2.45661 0.49762 0.382361 3.65895 4.70827 21.8194 0 0 0 t 0 0 0 0 28.5453 35.7704 33.4659 75.6947 2.45661 0.812274 98.3575 46.8606 33.0929 23.8742 0 0 0

M06506_2.00_rc_shift7 (HOXC5,NKX1-1,NKX1-2,OTP,SEBOX_rc)
; positions_6nt_m4 versus M06506_2.00_rc (HOXC5,NKX1-1,NKX1-2,OTP,SEBOX_rc); m=219/257; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.454828; -------yAATTAa--- ; cor=; Ncor= a 0 0 0 0 0 0 0 5.88235 100 100 0 0 100 64.7059 0 0 0 c 0 0 0 0 0 0 0 41.1765 0 0 0 0 0 11.7647 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 11.7647 0 0 0 t 0 0 0 0 0 0 0 52.9412 0 0 100 100 0 11.7647 0 0 0

M06511_2.00_rc_shift7 (NKX1-1,NKX1-2,OTP,SEBOX_rc)
; positions_6nt_m4 versus M06511_2.00_rc (NKX1-1,NKX1-2,OTP,SEBOX_rc); m=220/257; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.454173; -------YAATTAa--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 100 100 0 3.57143 96.4286 67.8571 0 0 0 c 0 0 0 0 0 0 0 25 0 0 0 0 0 14.2857 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 14.2857 0 0 0 t 0 0 0 0 0 0 0 75 0 0 100 96.4286 3.57143 3.57143 0 0 0

M06475_2.00_rc_shift7 (HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M06475_2.00_rc (HOXC5,HOXC6_rc); m=221/257; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.453115; -------TmATTAA--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 66.6667 94.4444 0 11.1111 100 77.7778 0 0 0 c 0 0 0 0 0 0 0 11.1111 33.3333 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 5.55556 0 0 0 0 0 16.6667 0 0 0 t 0 0 0 0 0 0 0 83.3333 0 5.55556 100 88.8889 0 5.55556 0 0 0

M00482_2.00_shift7 (OTP,SEBOX)
; positions_6nt_m4 versus M00482_2.00 (OTP,SEBOX); m=222/257; ncol2=7; w=0; offset=1; strand=D; shift=7; score=0.452787; -------wwAttrr--- ; cor=; Ncor= a 0 0 0 0 0 0 0 25.954 45.7205 70.7829 15.3576 17.7229 61.2146 38.1058 0 0 0 c 0 0 0 0 0 0 0 15.1246 9.13897 0.034722 7.40097 10.328 0.351476 17.8208 0 0 0 g 0 0 0 0 0 0 0 19.4204 19.5416 14.0078 16.8039 22.3061 31.0124 27.9486 0 0 0 t 0 0 0 0 0 0 0 39.501 25.5989 15.1745 60.4375 49.643 7.42154 16.1249 0 0 0

M06529_2.00_rc_shift7 (SEBOX_rc)
; positions_6nt_m4 versus M06529_2.00_rc (SEBOX_rc); m=223/257; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.451845; -------TAATTAA--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 100 100 0 0 100 88.8889 0 0 0 c 0 0 0 0 0 0 0 5.55556 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 11.1111 0 0 0 t 0 0 0 0 0 0 0 94.4444 0 0 100 100 0 0 0 0 0

M06332_2.00_rc_shift7 (SEBOX_rc)
; positions_6nt_m4 versus M06332_2.00_rc (SEBOX_rc); m=224/257; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.451845; -------TAATTAA--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 100 100 0 0 100 88.8889 0 0 0 c 0 0 0 0 0 0 0 5.55556 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 11.1111 0 0 0 t 0 0 0 0 0 0 0 94.4444 0 0 100 100 0 0 0 0 0

M06507_2.00_shift6 (HOXC5,NKX1-1,NKX1-2,OTP,SEBOX,TLX1)
; positions_6nt_m4 versus M06507_2.00 (HOXC5,NKX1-1,NKX1-2,OTP,SEBOX,TLX1); m=225/257; ncol2=7; w=0; offset=0; strand=D; shift=6; score=0.45152; ------yTAATkA---- ; cor=; Ncor= a 0 0 0 0 0 0 11.6279 6.97674 100 97.6744 2.32558 11.6279 79.0698 0 0 0 0 c 0 0 0 0 0 0 34.8837 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 13.9535 0 0 0 2.32558 37.2093 20.9302 0 0 0 0 t 0 0 0 0 0 0 39.5349 93.0233 0 2.32558 95.3488 51.1628 0 0 0 0 0

M00519_2.00_rc_shift6 (HOXC5,NKX1-1,NKX1-2,OTP,SEBOX_rc)
; positions_6nt_m4 versus M00519_2.00_rc (HOXC5,NKX1-1,NKX1-2,OTP,SEBOX_rc); m=226/257; ncol2=7; w=0; offset=0; strand=R; shift=6; score=0.450669; ------syaatya---- ; cor=; Ncor= a 0 0 0 0 0 0 19.6336 15.3106 47.5416 66.3215 24.4429 16.229 50.7267 0 0 0 0 c 0 0 0 0 0 0 30.182 32.4125 14.7553 12.6103 11.6621 26.4909 9.83997 0 0 0 0 g 0 0 0 0 0 0 25.7194 16.0956 16.9727 12.8651 10.0376 16.5569 19.6181 0 0 0 0 t 0 0 0 0 0 0 24.465 36.1814 20.7305 8.20312 53.8574 40.7233 19.8153 0 0 0 0

M06294_2.00_shift6 (HOXC5,NKX1-1,NKX1-2,OTP,SEBOX,TLX1)
; positions_6nt_m4 versus M06294_2.00 (HOXC5,NKX1-1,NKX1-2,OTP,SEBOX,TLX1); m=227/257; ncol2=7; w=0; offset=0; strand=D; shift=6; score=0.450604; ------yTAATkr---- ; cor=; Ncor= a 0 0 0 0 0 0 12.5135 10.2384 93.8245 98.8353 6.44637 18.8787 59.7779 0 0 0 0 c 0 0 0 0 0 0 34.7508 2.13976 0 0 1.54388 5.57963 2.54605 0 0 0 0 g 0 0 0 0 0 0 12.6219 0 3.49404 1.16468 3.3857 29.0087 29.415 0 0 0 0 t 0 0 0 0 0 0 40.1138 87.6219 2.68147 0 88.6241 46.533 8.26111 0 0 0 0

M06364_2.00_rc_shift6 (HOXC5,HOXC6,NANOGP8,NKX1-1,NKX1-2,OTP,SEBOX_rc)
; positions_6nt_m4 versus M06364_2.00_rc (HOXC5,HOXC6,NANOGP8,NKX1-1,NKX1-2,OTP,SEBOX_rc); m=228/257; ncol2=7; w=0; offset=0; strand=R; shift=6; score=0.44789; ------bTAATTA---- ; cor=; Ncor= a 0 0 0 0 0 0 0 21.7391 100 78.2609 0 13.0435 82.6087 0 0 0 0 c 0 0 0 0 0 0 26.087 0 0 0 4.34783 0 13.0435 0 0 0 0 g 0 0 0 0 0 0 43.4783 0 0 0 0 13.0435 4.34783 0 0 0 0 t 0 0 0 0 0 0 30.4348 78.2609 0 21.7391 95.6522 73.913 0 0 0 0 0

M00148_2.00_rc_shift3 (M00148_2.00_rc)
; positions_6nt_m4 versus M00148_2.00_rc; m=229/257; ncol2=10; w=-3; offset=-3; strand=R; shift=3; score=0.44743; ---yarhmAAyAA---- ; cor=; Ncor= a 0 0 0 18.1072 41.8948 40.2973 30.426 47.5931 81.4425 68.6845 16.077 82.2741 81.4196 0 0 0 0 c 0 0 0 32.0184 18.6372 14.1015 26.7169 30.3467 4.34879 11.1287 38.7601 1.64882 2.36225 0 0 0 0 g 0 0 0 24.6878 22.0908 25.1859 8.89328 8.69448 9.20639 7.7642 13.4287 12.062 5.4174 0 0 0 0 t 0 0 0 25.1866 17.3772 20.4153 33.9638 13.3657 5.0023 12.4227 31.7341 4.01508 10.8008 0 0 0 0

M06525_2.00_rc_shift7 (NKX1-1,NKX1-2,OTP,SEBOX_rc)
; positions_6nt_m4 versus M06525_2.00_rc (NKX1-1,NKX1-2,OTP,SEBOX_rc); m=230/257; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.447199; -------tAATTAr--- ; cor=; Ncor= a 0 0 0 0 0 0 0 23.5294 88.2353 100 0 5.88235 100 41.1765 0 0 0 c 0 0 0 0 0 0 0 23.5294 5.88235 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 5.88235 0 0 0 0 0 35.2941 0 0 0 t 0 0 0 0 0 0 0 47.0588 5.88235 0 100 94.1176 0 23.5294 0 0 0

M02651_2.00_shift9 (ARID3B,ARID3C)
; positions_6nt_m4 versus M02651_2.00 (ARID3B,ARID3C); m=231/257; ncol2=6; w=0; offset=3; strand=D; shift=9; score=0.446761; ---------ATyAAA-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 100 0 3.7037 100 100 74.0741 0 0 c 0 0 0 0 0 0 0 0 0 0 0 33.3333 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.7037 0 0 t 0 0 0 0 0 0 0 0 0 0 100 62.963 0 0 22.2222 0 0

M10527_2.00_shift3 (FOXI2,FOXI3,FOXJ2)
; positions_6nt_m4 versus M10527_2.00 (FOXI2,FOXI3,FOXJ2); m=232/257; ncol2=18; w=-3; offset=-3; strand=D; shift=3; score=0.446265; ---wwawAaAyAAAyAw ; cor=; Ncor= a 0 0 0 34.1463 34.1463 34.1463 36.5854 68.2927 63.4146 78.0488 0 100 100 100 0 97.561 29.2683 c 0 0 0 24.3902 21.9512 24.3902 17.0732 24.3902 7.31707 0 36.5854 0 0 0 65.8537 0 21.9512 g 0 0 0 4.87805 7.31707 19.5122 7.31707 7.31707 17.0732 21.9512 0 0 0 0 0 2.43902 14.6341 t 0 0 0 36.5854 36.5854 21.9512 39.0244 0 12.1951 0 63.4146 0 0 0 34.1463 0 34.1463

M00361_2.00_rc_shift5 (POU4F3_rc)
; positions_6nt_m4 versus M00361_2.00_rc (POU4F3_rc); m=233/257; ncol2=8; w=-1; offset=-1; strand=R; shift=5; score=0.446262; -----atkmATrw---- ; cor=; Ncor= a 0 0 0 0 0 42.8829 12.714 23.6573 57.8922 79.6941 3.97347 44.7848 39.3188 0 0 0 0 c 0 0 0 0 0 17.0897 14.6246 7.41624 25.7538 5.35588 5.92773 5.53931 20.5262 0 0 0 0 g 0 0 0 0 0 16.2562 7.11855 26.6736 6.87975 4.99379 1.8958 27.4364 14.3207 0 0 0 0 t 0 0 0 0 0 23.7712 65.5429 42.2529 9.47429 9.9562 88.203 22.2395 25.8343 0 0 0 0

M06204_2.00_shift6 (M06204_2.00)
; positions_6nt_m4 versus M06204_2.00; m=234/257; ncol2=7; w=0; offset=0; strand=D; shift=6; score=0.446207; ------cwGATAA---- ; cor=; Ncor= a 0 0 0 0 0 0 11.7647 58.8235 0 100 5.88235 100 100 0 0 0 0 c 0 0 0 0 0 0 52.9412 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 17.6471 0 100 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 17.6471 41.1765 0 0 94.1176 0 0 0 0 0 0

M05895_2.00_shift9 (LEF1)
; positions_6nt_m4 versus M05895_2.00 (LEF1); m=235/257; ncol2=10; w=0; offset=3; strand=D; shift=9; score=0.445993; ---------WTCAAAGg ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 74.3 3.2 4.6 98.4 98.5 96.3 8.8 23.2 c 0 0 0 0 0 0 0 0 0 0.3 0.5 84.9 0.2 0.5 0.6 12.9 18.9 g 0 0 0 0 0 0 0 0 0 0.3 0.2 8.7 0.2 0.4 1.8 77.3 44.6 t 0 0 0 0 0 0 0 0 0 25 96.2 1.8 1.2 0.6 1.3 0.9 13.4

M00347_2.00_shift6 (PAX4)
; positions_6nt_m4 versus M00347_2.00 (PAX4); m=236/257; ncol2=7; w=0; offset=0; strand=D; shift=6; score=0.445848; ------ydwATta---- ; cor=; Ncor= a 0 0 0 0 0 0 16.2331 25.0261 37.3787 77.9241 1.41154 18.342 54.5851 0 0 0 0 c 0 0 0 0 0 0 37.2277 19.2964 20.3098 1.25324 14.5077 14.8677 11.9384 0 0 0 0 g 0 0 0 0 0 0 15.7534 29.3684 14.8961 15.8907 8.53932 16.9318 13.194 0 0 0 0 t 0 0 0 0 0 0 30.7858 26.3092 27.4153 4.93195 75.5414 49.8586 20.2825 0 0 0 0

M06359_2.00_shift5 (HHEX)
; positions_6nt_m4 versus M06359_2.00 (HHEX); m=237/257; ncol2=8; w=-1; offset=-1; strand=D; shift=5; score=0.439075; -----tybAATwR---- ; cor=; Ncor= a 0 0 0 0 0 20.6564 5.79151 2.12355 80.1158 100 0.675676 27.2201 72.2973 0 0 0 0 c 0 0 0 0 0 17.8571 34.0734 29.7297 0 0 13.417 1.35135 0 0 0 0 0 g 0 0 0 0 0 13.9961 2.79923 28.668 13.61 0 11.7761 15.8301 27.7027 0 0 0 0 t 0 0 0 0 0 47.4903 57.3359 39.4788 6.27413 0 74.1313 55.5985 0 0 0 0 0

M00162_2.00_shift5 (FOXB2)
; positions_6nt_m4 versus M00162_2.00 (FOXB2); m=238/257; ncol2=8; w=-1; offset=-1; strand=D; shift=5; score=0.436349; -----GTAAAyAa---- ; cor=; Ncor= a 0 0 0 0 0 16.0144 0.0322165 87.8027 96.8826 99.9092 0.0302663 99.9092 63.0777 0 0 0 0 c 0 0 0 0 0 0.0399361 3.25387 12.1368 3.0569 0.0302663 63.5896 0.0302663 10.5567 0 0 0 0 g 0 0 0 0 0 83.9058 0.0322165 0.0302663 0.0302663 0.0302663 0.0302663 0.0302663 10.5567 0 0 0 0 t 0 0 0 0 0 0.0399361 96.6817 0.0302663 0.0302663 0.0302663 36.3499 0.0302663 15.8088 0 0 0 0

M03127_2.00_rc_shift6 (MSX2,NANOGP8,NKX1-1,NKX1-2,OTP,SEBOX_rc)
; positions_6nt_m4 versus M03127_2.00_rc (MSX2,NANOGP8,NKX1-1,NKX1-2,OTP,SEBOX_rc); m=239/257; ncol2=18; w=0; offset=0; strand=R; shift=6; score=0.435004; ------gCAATTAaaww ; cor=; Ncor= a 0 0 0 0 0 0 10.2249 3.28168 89.5645 95.3528 0 6.12366 94.6281 62.6856 61.8812 47.9495 50.4996 c 0 0 0 0 0 0 21.8814 74.1112 4.19063 2.92599 0.0625782 6.06421 0.495868 7.05446 14.1708 8.04416 6.84089 g 0 0 0 0 0 0 50.5112 1.18505 2.95809 1.37694 0 0.237812 2.72727 11.5718 12.0668 11.5142 14.681 t 0 0 0 0 0 0 17.3824 21.4221 3.28677 0.344234 99.9374 87.5743 2.14876 18.6881 11.8812 32.4921 27.9785

M00547_2.00_rc_shift5 (M00547_2.00_rc)
; positions_6nt_m4 versus M00547_2.00_rc; m=240/257; ncol2=8; w=-1; offset=-1; strand=R; shift=5; score=0.430596; -----aytaATda---- ; cor=; Ncor= a 0 0 0 0 0 33.1331 16.5466 18.8233 53.2506 84.2426 13.5529 28.9054 42.2022 0 0 0 0 c 0 0 0 0 0 23.8202 25.4364 6.7876 22.9889 4.97139 7.51272 10.0144 18.774 0 0 0 0 g 0 0 0 0 0 23.3485 11.203 23.2219 9.53539 8.70328 4.00121 30.3874 16.3213 0 0 0 0 t 0 0 0 0 0 19.6983 46.814 51.1671 14.2251 2.08277 74.9332 30.6928 22.7025 0 0 0 0

M00259_2.00_shift5 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1)
; positions_6nt_m4 versus M00259_2.00 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1); m=241/257; ncol2=8; w=-1; offset=-1; strand=D; shift=5; score=0.424112; -----rTAAACAa---- ; cor=; Ncor= a 0 0 0 0 0 58.7838 8.70982 78.6777 97.8104 99.9362 0.0212585 99.9348 61.2436 0 0 0 0 c 0 0 0 0 0 0.0293772 6.53779 14.9022 0.0212585 0.0212585 78.6777 0.0217202 9.69716 0 0 0 0 g 0 0 0 0 0 41.1575 0.0217202 0.0212585 0.0212585 0.0212585 0.0212585 0.0217202 12.9188 0 0 0 0 t 0 0 0 0 0 0.0293772 84.7307 6.39881 2.14711 0.0212585 21.2798 0.0217202 16.1405 0 0 0 0

M06541_2.00_shift5 (HHEX)
; positions_6nt_m4 versus M06541_2.00 (HHEX); m=242/257; ncol2=8; w=-1; offset=-1; strand=D; shift=5; score=0.423776; -----wYkAATWA---- ; cor=; Ncor= a 0 0 0 0 0 26.9231 0 0 80.7692 100 0 26.9231 84.6154 0 0 0 0 c 0 0 0 0 0 11.5385 26.9231 23.0769 0 0 11.5385 0 0 0 0 0 0 g 0 0 0 0 0 7.69231 0 26.9231 7.69231 0 11.5385 3.84615 15.3846 0 0 0 0 t 0 0 0 0 0 53.8462 73.0769 50 11.5385 0 76.9231 69.2308 0 0 0 0 0

M06358_2.00_shift5 (HHEX)
; positions_6nt_m4 versus M06358_2.00 (HHEX); m=243/257; ncol2=8; w=-1; offset=-1; strand=D; shift=5; score=0.423776; -----wYkAATWA---- ; cor=; Ncor= a 0 0 0 0 0 26.9231 0 0 80.7692 100 0 26.9231 84.6154 0 0 0 0 c 0 0 0 0 0 11.5385 26.9231 23.0769 0 0 11.5385 0 0 0 0 0 0 g 0 0 0 0 0 7.69231 0 26.9231 7.69231 0 11.5385 3.84615 15.3846 0 0 0 0 t 0 0 0 0 0 53.8462 73.0769 50 11.5385 0 76.9231 69.2308 0 0 0 0 0

M00289_2.00_rc_shift5 (MSX2,NANOGP8,NKX1-1,NKX1-2,OTP,SEBOX_rc)
; positions_6nt_m4 versus M00289_2.00_rc (MSX2,NANOGP8,NKX1-1,NKX1-2,OTP,SEBOX_rc); m=244/257; ncol2=8; w=-1; offset=-1; strand=R; shift=5; score=0.421882; -----wyyaATta---- ; cor=; Ncor= a 0 0 0 0 0 29.7327 19.7986 15.2491 62.8435 75.9728 12.3249 15.0667 64.1424 0 0 0 0 c 0 0 0 0 0 20.333 31.3625 45.8107 12.4366 7.6935 6.24401 14.3319 9.035 0 0 0 0 g 0 0 0 0 0 24.3431 21.0229 8.53793 8.59042 6.05192 6.12037 8.26877 12.0746 0 0 0 0 t 0 0 0 0 0 25.5912 27.816 30.4023 16.1295 10.2818 75.3107 62.3327 14.748 0 0 0 0

M08554_2.00_shift5 (M08554_2.00)
; positions_6nt_m4 versus M08554_2.00; m=245/257; ncol2=8; w=-1; offset=-1; strand=D; shift=5; score=0.420775; -----awmAACAa---- ; cor=; Ncor= a 0 0 0 0 0 51.3075 27.2549 67.0106 94.6809 100 0.7021 95.0104 58.0308 0 0 0 0 c 0 0 0 0 0 16.0895 7.678 31.5845 5.3191 0 85.5953 1.7114 17.0674 0 0 0 0 g 0 0 0 0 0 24.8858 4.1351 0.658101 0 0 0.4388 1.5356 10.8697 0 0 0 0 t 0 0 0 0 0 7.7172 60.932 0.746801 0 0 13.2638 1.7426 14.0321 0 0 0 0

M00429_2.00_rc_shift5 (NANOGP8,NKX1-1,NKX1-2,OTP,SEBOX_rc)
; positions_6nt_m4 versus M00429_2.00_rc (NANOGP8,NKX1-1,NKX1-2,OTP,SEBOX_rc); m=246/257; ncol2=8; w=-1; offset=-1; strand=R; shift=5; score=0.420186; -----rsyaATta---- ; cor=; Ncor= a 0 0 0 0 0 28.3194 20.1707 16.4841 61.0358 82.2257 5.51861 13.5708 66.2289 0 0 0 0 c 0 0 0 0 0 22.0552 31.0075 44.3625 14.3172 8.93046 5.46369 13.1697 7.12149 0 0 0 0 g 0 0 0 0 0 26.6702 25.3868 7.26011 12.4468 4.13492 0.0631732 7.37372 12.5927 0 0 0 0 t 0 0 0 0 0 22.9553 23.435 31.8933 12.2003 4.70896 88.9545 65.8857 14.0569 0 0 0 0

M07473_2.00_shift5 (M07473_2.00)
; positions_6nt_m4 versus M07473_2.00; m=247/257; ncol2=8; w=-1; offset=-1; strand=D; shift=5; score=0.41934; -----rwmAACAa---- ; cor=; Ncor= a 0 0 0 0 0 51 27 66.3366 95 100 1 94.0594 57.5758 0 0 0 0 c 0 0 0 0 0 16 8 31.6832 5 0 86 1.9802 17.1717 0 0 0 0 g 0 0 0 0 0 25 4 0.990099 0 0 0 1.9802 11.1111 0 0 0 0 t 0 0 0 0 0 8 61 0.990099 0 0 13 1.9802 14.1414 0 0 0 0

M07738_2.00_rc_shift9 (ZNF649_rc)
; positions_6nt_m4 versus M07738_2.00_rc (ZNF649_rc); m=248/257; ncol2=6; w=0; offset=3; strand=R; shift=9; score=0.417692; ---------ATATAA-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 99.8454 0.0515464 99.8454 0.0515464 99.8454 99.8454 0 0 c 0 0 0 0 0 0 0 0 0 0.0515464 0.0515464 0.0515464 0.0515464 0.0515464 0.0515464 0 0 g 0 0 0 0 0 0 0 0 0 0.0515464 0.0515464 0.0515464 0.0515464 0.0515464 0.0515464 0 0 t 0 0 0 0 0 0 0 0 0 0.0515464 99.8454 0.0515464 99.8454 0.0515464 0.0515464 0 0

M10526_2.00_rc_shift0 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1_rc)
; positions_6nt_m4 versus M10526_2.00_rc (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1_rc); m=249/257; ncol2=16; w=-6; offset=-6; strand=R; shift=0; score=0.416956; vshvwGTAAAYAAASA- ; cor=; Ncor= a 25 12.5 25 37.5 43.75 0 0 100 100 100 0 100 87.5 75 0 68.75 0 c 25 31.25 25 25 18.75 0 0 0 0 0 25 0 6.25 0 68.75 12.5 0 g 31.25 37.5 18.75 31.25 12.5 100 0 0 0 0 0 0 0 12.5 25 18.75 0 t 18.75 18.75 31.25 6.25 25 0 100 0 0 0 75 0 6.25 12.5 6.25 0 0

M00290_2.00_rc_shift5 (MSX2,NANOGP8,NKX1-1,NKX1-2,OTP,SEBOX_rc)
; positions_6nt_m4 versus M00290_2.00_rc (MSX2,NANOGP8,NKX1-1,NKX1-2,OTP,SEBOX_rc); m=250/257; ncol2=8; w=-1; offset=-1; strand=R; shift=5; score=0.416731; -----rsyaATta---- ; cor=; Ncor= a 0 0 0 0 0 26.8839 20.3135 15.6585 57.6395 76.0153 5.23414 14.3973 64.534 0 0 0 0 c 0 0 0 0 0 22.681 30.0026 44.3012 15.3975 11.0335 5.5025 14.6882 6.93924 0 0 0 0 g 0 0 0 0 0 26.3516 26.083 8.50804 12.6064 6.0553 0.568475 7.66789 12.7712 0 0 0 0 t 0 0 0 0 0 24.0835 23.6009 31.5323 14.3566 6.89595 88.6949 63.2466 15.7555 0 0 0 0

M06293_2.00_shift5 (HOXC5,NKX1-1,NKX1-2,OTP,SEBOX,TLX1)
; positions_6nt_m4 versus M06293_2.00 (HOXC5,NKX1-1,NKX1-2,OTP,SEBOX,TLX1); m=251/257; ncol2=8; w=-1; offset=-1; strand=D; shift=5; score=0.413893; -----dyTAATkA---- ; cor=; Ncor= a 0 0 0 0 0 25.5814 11.6279 6.97674 100 97.6744 2.32558 11.6279 79.0698 0 0 0 0 c 0 0 0 0 0 20.9302 34.8837 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 27.907 13.9535 0 0 0 2.32558 37.2093 20.9302 0 0 0 0 t 0 0 0 0 0 25.5814 39.5349 93.0233 0 2.32558 95.3488 51.1628 0 0 0 0 0

M00555_2.00_rc_shift5 (NANOGP8,NKX1-1,NKX1-2,OTP,SEBOX_rc)
; positions_6nt_m4 versus M00555_2.00_rc (NANOGP8,NKX1-1,NKX1-2,OTP,SEBOX_rc); m=252/257; ncol2=8; w=-1; offset=-1; strand=R; shift=5; score=0.413371; -----rsyAATTA---- ; cor=; Ncor= a 0 0 0 0 0 30.3652 18.4943 10.4504 75.8561 89.2749 2.70579 8.77907 79.4948 0 0 0 0 c 0 0 0 0 0 20.9743 32.7028 50.7361 9.57196 5.16404 2.12845 7.4066 3.27295 0 0 0 0 g 0 0 0 0 0 27.4755 27.3157 3.76835 6.81304 2.09954 0.0213949 4.58308 6.99847 0 0 0 0 t 0 0 0 0 0 21.1851 21.4873 35.0452 7.75888 3.46156 95.1444 79.2313 10.2338 0 0 0 0

M06248_2.00_rc_shift5 (HOXC5,HOXC6_rc)
; positions_6nt_m4 versus M06248_2.00_rc (HOXC5,HOXC6_rc); m=253/257; ncol2=8; w=-1; offset=-1; strand=R; shift=5; score=0.411763; -----rgcmATTA---- ; cor=; Ncor= a 0 0 0 0 0 28.7879 24.2424 10.6061 59.0909 84.8485 9.09091 16.6667 81.8182 0 0 0 0 c 0 0 0 0 0 6.06061 21.2121 60.6061 37.8788 13.6364 0 10.6061 4.54545 0 0 0 0 g 0 0 0 0 0 46.9697 33.3333 9.09091 0 0 0 3.0303 4.54545 0 0 0 0 t 0 0 0 0 0 18.1818 21.2121 19.697 3.0303 1.51515 90.9091 69.697 9.09091 0 0 0 0

M07485_2.00_rc_shift7 (OTP,SEBOX_rc)
; positions_6nt_m4 versus M07485_2.00_rc (OTP,SEBOX_rc); m=254/257; ncol2=6; w=0; offset=1; strand=R; shift=7; score=0.407065; -------wAwTAw---- ; cor=; Ncor= a 0 0 0 0 0 0 0 37 77 44 0 88 40.5941 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 7.92079 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 63 23 56 100 12 51.4851 0 0 0 0

M08572_2.00_rc_shift7 (OTP,SEBOX_rc)
; positions_6nt_m4 versus M08572_2.00_rc (OTP,SEBOX_rc); m=255/257; ncol2=6; w=0; offset=1; strand=R; shift=7; score=0.406531; -------wAwTAw---- ; cor=; Ncor= a 0 0 0 0 0 0 0 36.9531 76.9531 43.5156 0.078125 88.2031 40.7031 0 0 0 0 c 0 0 0 0 0 0 0 0.078125 0.078125 0.078125 0.078125 0.078125 7.57812 0 0 0 0 g 0 0 0 0 0 0 0 0.078125 0.078125 0.078125 0.078125 0.078125 0.078125 0 0 0 0 t 0 0 0 0 0 0 0 62.8906 22.8906 56.3281 99.7656 11.6406 51.6406 0 0 0 0

M00665_2.00_shift3 (FOXB2)
; positions_6nt_m4 versus M00665_2.00 (FOXB2); m=256/257; ncol2=11; w=-3; offset=-3; strand=D; shift=3; score=0.403756; ---rtgTAAAyAaa--- ; cor=; Ncor= a 0 0 0 29.029 24.337 21.5478 15.1281 91.9668 92.297 99.9637 0.0121055 88.268 50.8155 42.9714 0 0 0 c 0 0 0 21.1015 8.61728 6.00257 7.62986 8.009 7.67878 0.0121055 66.8017 3.91065 16.3948 19.0095 0 0 0 g 0 0 0 28.7681 8.61728 66.447 0.0121055 0.0121055 0.0121055 0.0121055 0.0121055 3.91065 16.3948 19.0095 0 0 0 t 0 0 0 21.1015 58.4284 6.00257 77.2299 0.0121055 0.0121055 0.0121055 33.1741 3.91065 16.3948 19.0095 0 0 0

M08236_2.00_rc_shift11 (MZF1_rc)
; positions_6nt_m4 versus M08236_2.00_rc (MZF1_rc); m=257/257; ncol2=7; w=0; offset=5; strand=R; shift=11; score=0.401248; -----------AAAATG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 100 100 100 100 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv4_m5_shift11 ; 106 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv4_m5_shift11 (oligos_6nt_mkv4_m5)
; oligos_6nt_mkv4_m5; m=0 (reference); ncol1=10; shift=11; ncol=21; -----------sbCCCCTCcc ; Alignment reference a 0 0 0 0 0 0 0 0 0 0 0 2541 2034 1 1 2 0 0 0 2364 1817 c 0 0 0 0 0 0 0 0 0 0 0 5634 5099 15969 15950 15952 15891 0 15970 8600 7745 g 0 0 0 0 0 0 0 0 0 0 0 4124 4432 0 19 16 79 0 0 1903 3162 t 0 0 0 0 0 0 0 0 0 0 0 3671 4405 0 0 0 0 15970 0 3103 3246

M08290_2.00_shift12 (MAZ)
; oligos_6nt_mkv4_m5 versus M08290_2.00 (MAZ); m=1/105; ncol2=9; w=0; offset=1; strand=D; shift=12; score=0.815017; ------------sCCCCkCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 2.21823 0.059952 0.059952 0.059952 0.059952 8.93285 0.059952 0.059952 0.059952 c 0 0 0 0 0 0 0 0 0 0 0 0 52.8177 92.1463 99.8201 99.8201 99.8201 0.059952 99.8201 99.8201 88.789 g 0 0 0 0 0 0 0 0 0 0 0 0 37.7098 0.059952 0.059952 0.059952 0.059952 35.3118 0.059952 0.059952 0.059952 t 0 0 0 0 0 0 0 0 0 0 0 0 7.2542 7.73381 0.059952 0.059952 0.059952 55.6954 0.059952 0.059952 11.0911

M08321_2.00_shift11 (ZNF281)
; oligos_6nt_mkv4_m5 versus M08321_2.00 (ZNF281); m=2/105; ncol2=12; w=0; offset=0; strand=D; shift=11; score=0.764847; -----------ybCCCCTCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 9.89583 12.5744 0.967262 1.86012 0.0744048 10.4911 9.59821 0.0744048 0.0744048 0.0744048 c 0 0 0 0 0 0 0 0 0 0 0 39.3601 27.753 92.3363 96.2054 99.7768 77.1577 0.0744048 99.7768 99.7768 96.2054 g 0 0 0 0 0 0 0 0 0 0 0 24.4792 27.1577 2.75298 0.0744048 0.0744048 0.0744048 17.0387 0.0744048 0.0744048 0.0744048 t 0 0 0 0 0 0 0 0 0 0 0 26.2649 32.5149 3.94345 1.86012 0.0744048 12.2768 73.2887 0.0744048 0.0744048 3.64583

M07754_2.00_shift10 (ZNF468)
; oligos_6nt_mkv4_m5 versus M07754_2.00 (ZNF468); m=3/105; ncol2=12; w=-1; offset=-1; strand=D; shift=10; score=0.748571; ----------CrCCCCCTCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 16.3043 42.6812 0.942029 0.0724638 0.0724638 0.0724638 0.0724638 2.97101 0.0724638 0.942029 0.942029 c 0 0 0 0 0 0 0 0 0 0 77.7536 0.942029 84.7101 98.913 88.4783 99.7826 99.4928 0.0724638 99.7826 98.3333 93.4058 g 0 0 0 0 0 0 0 0 0 0 2.10145 46.1594 9.92754 0.362319 0.0724638 0.0724638 0.0724638 0.652174 0.0724638 0.362319 0.942029 t 0 0 0 0 0 0 0 0 0 0 3.84058 10.2174 4.42029 0.652174 11.3768 0.0724638 0.362319 96.3043 0.0724638 0.362319 4.71014

M07652_2.00_shift10 (ZNF543)
; oligos_6nt_mkv4_m5 versus M07652_2.00 (ZNF543); m=4/105; ncol2=12; w=-1; offset=-1; strand=D; shift=10; score=0.736482; ----------sGsCCCCKCCc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 3.72984 0.100806 0.504032 0.100806 0.100806 0.100806 0.100806 0.100806 0.100806 11.3911 14.2137 c 0 0 0 0 0 0 0 0 0 0 31.9556 0.100806 50.1008 96.875 70.2621 87.6008 99.6976 0.504032 98.8911 88.4073 51.3105 g 0 0 0 0 0 0 0 0 0 0 64.2137 88.4073 30.746 0.100806 9.375 8.97177 0.100806 25.9073 0.504032 0.100806 20.6653 t 0 0 0 0 0 0 0 0 0 0 0.100806 11.3911 18.6492 2.92339 20.2621 3.32661 0.100806 73.4879 0.504032 0.100806 13.8105

M08287_2.00_shift13 (PATZ1)
; oligos_6nt_mkv4_m5 versus M08287_2.00 (PATZ1); m=5/105; ncol2=8; w=0; offset=2; strand=D; shift=13; score=0.711736; -------------CCCCkCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.7333 0 0 22.1333 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 94.1333 81.0667 100 100 0 100 100 84 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35.2 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 5.8667 11.2 0 0 42.6667 0 0 16

M01172_2.00_shift11 (VEZF1)
; oligos_6nt_mkv4_m5 versus M01172_2.00 (VEZF1); m=6/105; ncol2=10; w=0; offset=0; strand=D; shift=11; score= 0.71; -----------CCCCCCmytw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 7.173 0.17421 0.427526 0.21282 0.666427 1.00267 40.685 4.47697 24.049 33.3261 c 0 0 0 0 0 0 0 0 0 0 0 79.0692 99.7338 99.5102 99.7526 98.9066 97.7743 35.7253 55.0887 17.1174 17.3977 g 0 0 0 0 0 0 0 0 0 0 0 13.7402 0.0839533 0.0167436 0.0014197 0.00207909 0.333758 11.088 7.02128 21.1173 15.2769 t 0 0 0 0 0 0 0 0 0 0 0 0.0176032 0 0.0455138 0.0331303 0.424933 0.889284 12.5016 33.413 37.7163 33.9993

M02664_2.00_shift10 (MZF1)
; oligos_6nt_mkv4_m5 versus M02664_2.00 (MZF1); m=7/105; ncol2=10; w=-1; offset=-1; strand=D; shift=10; score=0.706644; ----------yymCCCMTmv- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 12.5 12.5 25 12.5 0 6.25 31.25 0 43.75 25 0 c 0 0 0 0 0 0 0 0 0 0 25 25 50 87.5 87.5 93.75 68.75 0 43.75 43.75 0 g 0 0 0 0 0 0 0 0 0 0 12.5 0 6.25 0 12.5 0 0 6.25 0 25 0 t 0 0 0 0 0 0 0 0 0 0 50 62.5 18.75 0 0 0 0 93.75 12.5 6.25 0

M02891_2.00_shift11 (ZNF740)
; oligos_6nt_mkv4_m5 versus M02891_2.00 (ZNF740); m=8/105; ncol2=10; w=0; offset=0; strand=D; shift=11; score=0.705914; -----------mCCCCCCCAc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 27.3826 7.78087 6.20484 0.948509 0.902527 0.361991 2.33996 4.5264 68.0266 12.4568 c 0 0 0 0 0 0 0 0 0 0 0 46.2576 85.391 91.4152 97.1545 97.0668 97.3303 94.9669 90.1509 18.5642 61.8815 g 0 0 0 0 0 0 0 0 0 0 0 17.7592 1.07185 0.297493 0.361337 0.541516 0.950226 1.6777 0.963956 3.60531 5.29344 t 0 0 0 0 0 0 0 0 0 0 0 8.60065 5.75625 2.08245 1.53568 1.48917 1.35747 1.01545 4.35876 9.80392 20.3682

M00129_2.00_shift10 (M00129_2.00)
; oligos_6nt_mkv4_m5 versus M00129_2.00; m=9/105; ncol2=11; w=-1; offset=-1; strand=D; shift=10; score=0.698813; ----------rgACCCCycwy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 29.7787 12.2468 85.3502 0.0178164 0.0178164 0.0178164 0.0178164 0.0178164 4.49067 33.5713 20.1346 c 0 0 0 0 0 0 0 0 0 0 20.5271 12.2468 4.88326 99.9466 99.9466 99.9466 99.9466 63.4038 67.8767 12.771 30.0897 g 0 0 0 0 0 0 0 0 0 0 29.167 51.6476 4.88326 0.0178164 0.0178164 0.0178164 0.0178164 0.0178164 4.49067 22.7261 20.1346 t 0 0 0 0 0 0 0 0 0 0 20.5271 23.8588 4.88326 0.0178164 0.0178164 0.0178164 0.0178164 36.5605 23.142 30.9315 29.6412

M08279_2.00_shift11 (ZNF37A)
; oligos_6nt_mkv4_m5 versus M08279_2.00 (ZNF37A); m=10/105; ncol2=9; w=0; offset=0; strand=D; shift=11; score=0.683234; -----------yyyyyyTCC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 12.1211 0.923434 4.1502 4.47036 2.2778 0.665369 1.1815 0.0852402 1.43956 0 c 0 0 0 0 0 0 0 0 0 0 0 40.8967 65.9349 38.7955 55.0712 58.2745 63.8721 0.0852402 99.7443 98.39 0 g 0 0 0 0 0 0 0 0 0 0 0 18.5164 0.0852402 2.79393 14.6661 3.82683 0.0852402 0.0852402 0.0852402 0.0852402 0 t 0 0 0 0 0 0 0 0 0 0 0 28.4658 33.0565 54.2603 25.7923 35.6209 35.3773 98.648 0.0852402 0.0852402 0

M10134_2.00_shift10 (MZF1)
; oligos_6nt_mkv4_m5 versus M10134_2.00 (MZF1); m=11/105; ncol2=13; w=-1; offset=-1; strand=D; shift=10; score=0.678417; ----------tTsCCCCTmvy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 6.25 18.75 12.5 12.5 0 6.25 18.75 0 37.5 37.5 18.75 c 0 0 0 0 0 0 0 0 0 0 12.5 12.5 43.75 81.25 87.5 93.75 75 18.75 62.5 25 50 g 0 0 0 0 0 0 0 0 0 0 18.75 0 25 0 6.25 0 0 0 0 25 6.25 t 0 0 0 0 0 0 0 0 0 0 62.5 68.75 18.75 6.25 6.25 0 6.25 81.25 0 12.5 25

M08086_2.00_shift12 (KLF5)
; oligos_6nt_mkv4_m5 versus M08086_2.00 (KLF5); m=12/105; ncol2=10; w=0; offset=1; strand=D; shift=12; score=0.661176; ------------gCCMCrCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 10.4989 0 0 25.5455 0 37.1097 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 14.863 87.4293 88.2228 70.3034 100 0 100 100 96.5028 g 0 0 0 0 0 0 0 0 0 0 0 0 55.6315 0 0 0 0 38.0721 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 19.0067 12.5707 11.7772 4.15105 0 24.8182 0 0 3.49717

M08327_2.00_shift11 (ZNF610)
; oligos_6nt_mkv4_m5 versus M08327_2.00 (ZNF610); m=13/105; ncol2=9; w=0; offset=0; strand=D; shift=11; score=0.657881; -----------yGCCGCTCC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 20.4424 4.62466 8.10992 0.0670241 0.0670241 0.0670241 0.0670241 0.0670241 7.84182 0 c 0 0 0 0 0 0 0 0 0 0 0 35.7239 0.0670241 86.9303 99.7989 0.0670241 99.7989 0.0670241 99.7989 75.4021 0 g 0 0 0 0 0 0 0 0 0 0 0 16.9571 91.2198 4.89276 0.0670241 99.7989 0.0670241 0.0670241 0.0670241 5.42895 0 t 0 0 0 0 0 0 0 0 0 0 0 26.8767 4.08847 0.0670241 0.0670241 0.0670241 0.0670241 99.7989 0.0670241 11.3271 0

M07709_2.00_shift12 (ZKSCAN5)
; oligos_6nt_mkv4_m5 versus M07709_2.00 (ZKSCAN5); m=14/105; ncol2=9; w=0; offset=1; strand=D; shift=12; score=0.654502; ------------TCACCTCCy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0.0739645 0.0739645 87.0562 6.28698 0.0739645 0.0739645 0.0739645 3.3284 13.9792 c 0 0 0 0 0 0 0 0 0 0 0 0 0.0739645 98.003 0.0739645 93.5651 90.6065 0.0739645 99.7781 88.2396 32.9142 g 0 0 0 0 0 0 0 0 0 0 0 0 0.0739645 0.0739645 5.99112 0.0739645 0.0739645 0.0739645 0.0739645 0.0739645 12.796 t 0 0 0 0 0 0 0 0 0 0 0 0 99.7781 1.84911 6.8787 0.0739645 9.24556 99.7781 0.0739645 8.35799 40.3107

M08021_2.00_shift11 (M08021_2.00)
; oligos_6nt_mkv4_m5 versus M08021_2.00; m=15/105; ncol2=11; w=0; offset=0; strand=D; shift=11; score=0.653858; -----------rrCCmCrCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 27.5748 27.2425 4.6512 3.6545 45.515 0 52.4917 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 21.2625 6.9767 87.3754 86.7109 49.5017 100 0 100 100 98.6711 g 0 0 0 0 0 0 0 0 0 0 0 39.5349 56.1462 2.3256 0 0.996699 0 36.8771 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 11.6279 9.6346 5.6478 9.63459 3.9867 0 10.6312 0 0 1.3289

M07616_2.00_shift11 (ZNF610)
; oligos_6nt_mkv4_m5 versus M07616_2.00 (ZNF610); m=16/105; ncol2=9; w=0; offset=0; strand=D; shift=11; score=0.649021; -----------cGCCGCTCC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 22.557 6.59609 5.61889 0.0814332 0.0814332 0.0814332 0.0814332 0.0814332 0.0814332 0 c 0 0 0 0 0 0 0 0 0 0 0 41.7752 0.0814332 79.886 99.7557 0.0814332 99.7557 0.0814332 99.7557 99.7557 0 g 0 0 0 0 0 0 0 0 0 0 0 20.9283 84.772 14.4137 0.0814332 99.7557 0.0814332 0.0814332 0.0814332 0.0814332 0 t 0 0 0 0 0 0 0 0 0 0 0 14.7394 8.55049 0.0814332 0.0814332 0.0814332 0.0814332 99.7557 0.0814332 0.0814332 0

M04814_2.00_shift11 (FOXO3,FOXP4)
; oligos_6nt_mkv4_m5 versus M04814_2.00 (FOXO3,FOXP4); m=17/105; ncol2=11; w=0; offset=0; strand=D; shift=11; score=0.648066; -----------ttCCCCACAC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 23.6842 17.134 11.8644 10.566 2.75229 6.06061 71.2687 2.55102 72.3485 13.6752 c 0 0 0 0 0 0 0 0 0 0 0 23.6842 14.3302 80.9322 72.0755 87.6147 72.3485 12.3134 97.449 20.0758 81.6239 g 0 0 0 0 0 0 0 0 0 0 0 15.2632 9.03427 5.08475 12.0755 0 8.33333 2.61194 0 1.89394 2.5641 t 0 0 0 0 0 0 0 0 0 0 0 37.3684 59.5016 2.11864 5.28302 9.63303 13.2576 13.806 0 5.68182 2.13675

M04509_2.00_shift12 (ZNF281)
; oligos_6nt_mkv4_m5 versus M04509_2.00 (ZNF281); m=18/105; ncol2=12; w=0; offset=1; strand=D; shift=12; score=0.645915; ------------gCCCCTCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 11.2647 2.15385 4.33229 0.138504 6.92892 2.06233 0 1.67286 3.41696 c 0 0 0 0 0 0 0 0 0 0 0 0 14.7892 92.2198 93.9705 98.2918 91.0148 0 99.8126 98.3271 91.263 g 0 0 0 0 0 0 0 0 0 0 0 0 61.2647 0.835165 1.25056 0 0.49173 0 0.0937207 0 1.25433 t 0 0 0 0 0 0 0 0 0 0 0 0 12.6814 4.79121 0.446628 1.56971 1.5646 97.9377 0.0937207 0 4.06574

M08301_2.00_shift11 (GTF3A)
; oligos_6nt_mkv4_m5 versus M08301_2.00 (GTF3A); m=19/105; ncol2=9; w=0; offset=0; strand=D; shift=11; score=0.645473; -----------CTCCCATCC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 1.8 2.6 0.2 0.2 1 85.8 0.2 0.2 0.2 0 c 0 0 0 0 0 0 0 0 0 0 0 89 0.2 93.8 96.2 97.8 1.8 1 96.2 95.4 0 g 0 0 0 0 0 0 0 0 0 0 0 5 0.2 4.2 0.2 0.2 0.2 0.2 0.2 0.2 0 t 0 0 0 0 0 0 0 0 0 0 0 4.2 97 1.8 3.4 1 12.2 98.6 3.4 4.2 0

M09505_2.00_shift13 (MAZ)
; oligos_6nt_mkv4_m5 versus M09505_2.00 (MAZ); m=20/105; ncol2=8; w=0; offset=2; strand=D; shift=13; score=0.636896; -------------CCCCcCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0.1 0.1 0.1 5.4 8.4 0.1 0.1 c 0 0 0 0 0 0 0 0 0 0 0 0 0 99.7 95.6 89.4 84.8 60.7 70.2 99.7 98.9 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0.1 5.8 6.1 14.9 8.2 0.1 0.1 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 4.2 4.7 9 19 13.2 0.1 0.9

M07727_2.00_shift10 (ZNF460)
; oligos_6nt_mkv4_m5 versus M07727_2.00 (ZNF460); m=21/105; ncol2=12; w=-1; offset=-1; strand=D; shift=10; score=0.63473; ----------cgCCrCCkCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 15.7 0.1 0.1 4.1 26.5 0.1 0.1 10.5 0.1 0.1 3.7 c 0 0 0 0 0 0 0 0 0 0 66.9 23.3 85.3 95.7 9.7 99.7 99.7 0.1 99.7 77.7 77.3 g 0 0 0 0 0 0 0 0 0 0 17.3 66.1 14.5 0.1 50.1 0.1 0.1 28.5 0.1 22.1 4.5 t 0 0 0 0 0 0 0 0 0 0 0.1 10.5 0.1 0.1 13.7 0.1 0.1 60.9 0.1 0.1 14.5

M08096_2.00_shift12 (SP1)
; oligos_6nt_mkv4_m5 versus M08096_2.00 (SP1); m=22/105; ncol2=11; w=0; offset=1; strand=D; shift=12; score=0.626286; ------------gCCCCkCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 9.81223 0 1.1335 0 0 15.5599 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 20.4488 71.1587 76.746 100 99.1642 0 100 100 76.4713 g 0 0 0 0 0 0 0 0 0 0 0 0 48.9008 7.35058 0 0 0 52.9425 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 20.8381 21.4907 22.1204 0 0.835814 31.4976 0 0 23.5287

M10137_2.00_shift10 (PATZ1)
; oligos_6nt_mkv4_m5 versus M10137_2.00 (PATZ1); m=23/105; ncol2=13; w=-1; offset=-1; strand=D; shift=10; score=0.624883; ----------kgkCCCCCCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 12.8205 15.3846 17.9487 0 0 0 0 10.2564 0 5.12821 2.5641 c 0 0 0 0 0 0 0 0 0 0 15.3846 10.2564 0 100 100 97.4359 100 74.359 92.5 89.7436 71.7949 g 0 0 0 0 0 0 0 0 0 0 28.2051 51.2821 51.2821 0 0 0 0 0 0 0 10.2564 t 0 0 0 0 0 0 0 0 0 0 43.5897 23.0769 30.7692 0 0 2.5641 0 15.3846 7.5 5.12821 15.3846

M10133_2.00_shift12 (MZF1)
; oligos_6nt_mkv4_m5 versus M10133_2.00 (MZF1); m=24/105; ncol2=8; w=0; offset=1; strand=D; shift=12; score=0.615435; ------------TCCCCmcy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 45 15 15 0 c 0 0 0 0 0 0 0 0 0 0 0 0 5 100 95 90 100 25 55 30 0 g 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 15 10 15 0 t 0 0 0 0 0 0 0 0 0 0 0 0 90 0 0 5 0 15 20 40 0

M04510_2.00_shift12 (ZNF281)
; oligos_6nt_mkv4_m5 versus M04510_2.00 (ZNF281); m=25/105; ncol2=12; w=0; offset=1; strand=D; shift=12; score=0.612049; ------------rCCCmTCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 26.988 15.4793 12.0417 1.77179 33.1018 15.3637 4.31528 5.19077 15.1746 c 0 0 0 0 0 0 0 0 0 0 0 0 6.55738 70.9328 80.4375 96.1729 59.0519 0.0777907 89.432 89.8181 71.7682 g 0 0 0 0 0 0 0 0 0 0 0 0 58.4781 7.34484 3.875 1.25207 4.72007 6.06768 3.941 3.54925 7.16939 t 0 0 0 0 0 0 0 0 0 0 0 0 7.97651 6.24311 3.64583 0.803213 3.12628 78.4909 2.31176 1.44188 5.88782

M00343_2.00_shift9 (PAX6)
; oligos_6nt_mkv4_m5 versus M00343_2.00 (PAX6); m=26/105; ncol2=13; w=-2; offset=-2; strand=D; shift=9; score=0.597282; ---------tagkcCCgkCyb ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 22.4601 32.6198 22.4601 17.793 14.6035 0.0255694 10.2676 19.6935 2.5655 2.5655 12.6708 7.23261 c 0 0 0 0 0 0 0 0 0 22.4601 22.4601 22.4601 17.793 65.7458 79.5279 70.1501 18.9203 11.9691 81.0011 41.963 29.5268 g 0 0 0 0 0 0 0 0 0 22.4601 22.4601 32.6198 27.1966 14.5383 9.42922 19.5567 61.3606 33.0641 13.8679 13.8679 26.829 t 0 0 0 0 0 0 0 0 0 32.6198 22.4601 22.4601 37.2175 5.1124 11.0173 0.0255694 0.0255694 52.4012 2.5655 31.4983 36.4116

M01917_2.00_rc_shift12 (M01917_2.00_rc)
; oligos_6nt_mkv4_m5 versus M01917_2.00_rc; m=27/105; ncol2=8; w=0; offset=1; strand=R; shift=12; score=0.596964; ------------tCCCCCCc- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 10.8757 6.35513 3.18153 0.801333 3.97493 2.38813 7.38283 7.34593 0 c 0 0 0 0 0 0 0 0 0 0 0 0 23.9135 78.5544 81.728 97.596 93.629 87.2818 68.0187 62.3716 0 g 0 0 0 0 0 0 0 0 0 0 0 0 17.3946 7.94192 8.73532 1.59473 2.38813 8.73532 20.4933 17.434 0 t 0 0 0 0 0 0 0 0 0 0 0 0 47.8162 7.14852 6.35513 0.00793399 0.00793399 1.59473 4.10521 12.8485 0

M07655_2.00_shift12 (ZNF552)
; oligos_6nt_mkv4_m5 versus M07655_2.00 (ZNF552); m=28/105; ncol2=11; w=0; offset=1; strand=D; shift=12; score=0.596516; ------------kCCCCTCGT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 18.6441 11.8644 1.6949 3.3898 1.6949 0 0 1.6949 1.6949 c 0 0 0 0 0 0 0 0 0 0 0 0 5.0847 79.661 98.3051 96.6102 94.9153 0 98.3051 0 1.6949 g 0 0 0 0 0 0 0 0 0 0 0 0 44.0678 1.6949 0 0 0 0 1.6949 98.3051 1.6949 t 0 0 0 0 0 0 0 0 0 0 0 0 32.2034 6.7797 0 0 3.3898 100 0 0 94.9153

M00230_2.00_shift10 (EGR2)
; oligos_6nt_mkv4_m5 versus M00230_2.00 (EGR2); m=29/105; ncol2=10; w=-1; offset=-1; strand=D; shift=10; score=0.593308; ----------mcrCCCmccy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 30.4696 12.7214 30.8306 6.07116 0.756708 7.19322 39.7106 8.59421 16.1831 12.8811 0 c 0 0 0 0 0 0 0 0 0 0 37.5897 53.1588 7.45219 86.795 95.7003 69.626 41.7466 67.4299 63.6863 47.7397 0 g 0 0 0 0 0 0 0 0 0 0 12.5125 11.1706 43.7507 0.00921935 3.22593 2.41848 9.03963 6.49536 5.77749 10.1326 0 t 0 0 0 0 0 0 0 0 0 0 19.4283 22.9492 17.9665 7.12457 0.317024 20.7623 9.50311 17.4805 14.3531 29.2466 0

M00143_2.00_shift12 (M00143_2.00)
; oligos_6nt_mkv4_m5 versus M00143_2.00; m=30/105; ncol2=10; w=0; offset=1; strand=D; shift=12; score=0.584403; ------------ccCCCCCay ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 23.4762 22.5596 3.46737 4.55575 4.44789 11.7815 6.04568 40.4091 24.0527 c 0 0 0 0 0 0 0 0 0 0 0 0 48.715 67.0984 90.3233 89.6927 84.1356 86.1883 87.2994 15.0151 29.9716 g 0 0 0 0 0 0 0 0 0 0 0 0 10.7616 2.68092 2.81059 0.0747497 2.18678 0.285514 0.548452 20.0665 17.4659 t 0 0 0 0 0 0 0 0 0 0 0 0 17.0472 7.66113 3.39871 5.67681 9.22973 1.74462 6.10644 24.5093 28.5098

M08243_2.00_shift12 (KLF4)
; oligos_6nt_mkv4_m5 versus M08243_2.00 (KLF4); m=31/105; ncol2=10; w=0; offset=1; strand=D; shift=12; score=0.582113; ------------gCCmCrCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 21.5541 6.6731 2.8826 47.0176 0.7831 49.183 0.3685 0.2997 0.1386 c 0 0 0 0 0 0 0 0 0 0 0 0 6.4761 87.4843 89.9686 50.1722 98.364 0.2536 98.4801 99.0776 97.6252 g 0 0 0 0 0 0 0 0 0 0 0 0 66.0954 3.0022 1.0613 1.8427 0.346 44.1938 0.8289 0.3 0.2081 t 0 0 0 0 0 0 0 0 0 0 0 0 5.8745 2.8404 6.0875 0.9675 0.5068 6.3696 0.3225 0.3227 2.028

M08246_2.00_shift12 (KLF10)
; oligos_6nt_mkv4_m5 versus M08246_2.00 (KLF10); m=32/105; ncol2=10; w=0; offset=1; strand=D; shift=12; score=0.582113; ------------gCCmCrCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 21.554 6.673 2.8825 47.0175 0.7831 49.183 0.3685 0.2997 0.1386 c 0 0 0 0 0 0 0 0 0 0 0 0 6.4761 87.4843 89.9687 50.1723 98.3641 0.2537 98.4802 99.0777 97.6252 g 0 0 0 0 0 0 0 0 0 0 0 0 66.0954 3.0023 1.0613 1.8427 0.3461 44.1938 0.8289 0.3001 0.2082 t 0 0 0 0 0 0 0 0 0 0 0 0 5.8745 2.8403 6.0874 0.9675 0.5068 6.3696 0.3225 0.3227 2.0279

M10300_2.00_shift11 (SP1)
; oligos_6nt_mkv4_m5 versus M10300_2.00 (SP1); m=33/105; ncol2=13; w=0; offset=0; strand=D; shift=11; score=0.580635; -----------vrcCCCGCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 25 26.8519 8.33333 5.55556 7.40741 1.85185 8.33333 0 0 0.925926 c 0 0 0 0 0 0 0 0 0 0 0 29.6296 19.4444 66.6667 70.3704 91.6667 91.6667 0 98.1481 100 82.4074 g 0 0 0 0 0 0 0 0 0 0 0 37.037 50.9259 9.25926 4.62963 0.925926 4.62963 74.0741 1.85185 0 0.925926 t 0 0 0 0 0 0 0 0 0 0 0 8.33333 2.77778 15.7407 19.4444 0 1.85185 17.5926 0 0 15.7407

M00784_2.00_shift12 (M00784_2.00)
; oligos_6nt_mkv4_m5 versus M00784_2.00; m=34/105; ncol2=10; w=0; offset=1; strand=D; shift=12; score=0.579907; ------------cCCCCCCay ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 17.3335 21.1796 0.0178463 0.803491 0.0177459 2.56885 12.8322 46.6398 19.5656 c 0 0 0 0 0 0 0 0 0 0 0 0 64.2411 73.1883 99.8869 96.661 98.3368 95.9145 75.336 24.84 35.2961 g 0 0 0 0 0 0 0 0 0 0 0 0 11.1634 0.0305936 0.0610562 0.072891 0.110626 0.0783521 1.32572 14.3314 12.2285 t 0 0 0 0 0 0 0 0 0 0 0 0 7.26191 5.60151 0.0341852 2.46258 1.5348 1.43829 10.5061 14.1888 32.9098

M04468_2.00_shift10 (ZNF740)
; oligos_6nt_mkv4_m5 versus M04468_2.00 (ZNF740); m=35/105; ncol2=13; w=-1; offset=-1; strand=D; shift=10; score=0.57927; ----------cygCCCCCCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 10.4898 3.7037 13.6842 3.32393 0.10327 0.892538 0.757303 2.56321 1.37761 2.66999 0 c 0 0 0 0 0 0 0 0 0 0 61.1477 45.0794 12.2978 85.5127 93.8726 96.9654 98.7018 92.345 96.609 97.33 76.6761 g 0 0 0 0 0 0 0 0 0 0 11.0015 3.59788 58.6906 10.5989 1.13597 1.21385 0.036062 0.311742 0 0 22.4426 t 0 0 0 0 0 0 0 0 0 0 17.3611 47.619 15.3273 0.56444 4.88812 0.92824 0.504868 4.78005 2.01342 0 0.881335

M02892_2.00_shift12 (ZNF740)
; oligos_6nt_mkv4_m5 versus M02892_2.00 (ZNF740); m=36/105; ncol2=10; w=0; offset=1; strand=D; shift=12; score=0.578631; ------------cCCCCCCCA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 19.8051 2.29439 1.13194 1.38249 5.04422 0.612944 0.899119 1.61807 72.652 c 0 0 0 0 0 0 0 0 0 0 0 0 57.0798 95.976 96.1797 96.3843 89.0599 98.035 97.7882 91.6568 7.02739 g 0 0 0 0 0 0 0 0 0 0 0 0 16.0537 0.352983 1.04351 1.08118 2.86603 0.757166 0.143859 1.1967 7.08083 t 0 0 0 0 0 0 0 0 0 0 0 0 7.06142 1.37663 1.64485 1.15207 3.02981 0.594916 1.16885 5.5284 13.2398

M04470_2.00_shift10 (ZNF740)
; oligos_6nt_mkv4_m5 versus M04470_2.00 (ZNF740); m=37/105; ncol2=13; w=-1; offset=-1; strand=D; shift=10; score=0.573163; ----------cygCCCCCCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 15.541 8.9477 24.4419 2.9212 3.81944 0.361011 0.433839 0.433526 0.21692 0 4.37731 c 0 0 0 0 0 0 0 0 0 0 48.2934 47.385 14.4533 93.5462 95.625 99.4224 99.5662 99.4942 99.5662 100 84.8952 g 0 0 0 0 0 0 0 0 0 0 16.7756 4.34783 52.0999 1.97011 0 0 0 0.0722543 0 0 9.98767 t 0 0 0 0 0 0 0 0 0 0 19.39 39.3195 9.00492 1.5625 0.555556 0.216606 0 0 0.21692 0 0.739827

M04469_2.00_shift10 (ZNF740)
; oligos_6nt_mkv4_m5 versus M04469_2.00 (ZNF740); m=38/105; ncol2=13; w=-1; offset=-1; strand=D; shift=10; score=0.566163; ----------cyrCCCCCCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 17.6303 12.5679 29.8318 4.99584 9.32203 1.64684 2.00182 2.10623 0.927644 0.188147 9.74576 c 0 0 0 0 0 0 0 0 0 0 47.5829 52.5213 14.0747 87.8435 89.4068 96.5233 95.9964 96.6117 97.8664 99.2474 89.4068 g 0 0 0 0 0 0 0 0 0 0 17.2512 5.58573 43.2909 3.08077 1.18644 0.365965 0.636943 0.274725 0.649351 0.28222 0.508475 t 0 0 0 0 0 0 0 0 0 0 17.5355 29.3251 12.8026 4.07993 0.0847458 1.46386 1.36488 1.00733 0.556586 0.28222 0.338983

M08349_2.00_shift10 (EGR3)
; oligos_6nt_mkv4_m5 versus M08349_2.00 (EGR3); m=39/105; ncol2=9; w=-1; offset=-1; strand=D; shift=10; score=0.56381; ----------CkCCYCCdC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0647668 21.8264 0.0647668 0.0647668 0.0647668 18.1995 0.0647668 29.5984 0.0647668 0 0 c 0 0 0 0 0 0 0 0 0 0 99.8057 0.0647668 99.8057 99.8057 73.6399 81.671 99.8057 0.0647668 75.7124 0 0 g 0 0 0 0 0 0 0 0 0 0 0.0647668 49.0285 0.0647668 0.0647668 0.0647668 0.0647668 0.0647668 40.2202 24.158 0 0 t 0 0 0 0 0 0 0 0 0 0 0.0647668 29.0803 0.0647668 0.0647668 26.2306 0.0647668 0.0647668 30.1166 0.0647668 0 0

M04467_2.00_shift10 (ZNF740)
; oligos_6nt_mkv4_m5 versus M04467_2.00 (ZNF740); m=40/105; ncol2=13; w=-1; offset=-1; strand=D; shift=10; score=0.563369; ----------cygCCCCCCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 16.3462 8.51666 16.5473 3.08014 1.76844 2.31023 1.0166 1.14401 1.92819 1.04027 2.9304 c 0 0 0 0 0 0 0 0 0 0 49.2445 35.7951 15.4853 86.9019 96.9303 95.8086 98.3734 97.7793 96.6755 97.7852 95.9374 g 0 0 0 0 0 0 0 0 0 0 14.011 4.99686 55.9397 9.65909 1.2012 0.627063 0.169434 0.336474 0.49867 0.402685 0.566101 t 0 0 0 0 0 0 0 0 0 0 20.3984 50.6914 12.0277 0.358852 0.1001 1.25413 0.440529 0.740242 0.897606 0.771812 0.566101

M08879_2.00_shift12 (KLF12)
; oligos_6nt_mkv4_m5 versus M08879_2.00 (KLF12); m=41/105; ncol2=11; w=0; offset=1; strand=D; shift=12; score=0.552777; ------------GCCCCGCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 3.9823 1.54867 3.9823 19.469 1.54867 2.87611 0 0.221239 0.442478 c 0 0 0 0 0 0 0 0 0 0 0 0 2.87611 96.4602 86.2832 79.2035 96.0177 0.221239 100 99.5575 93.1416 g 0 0 0 0 0 0 0 0 0 0 0 0 80.0885 0.663717 0 0.884956 0.221239 87.8319 0 0.221239 0 t 0 0 0 0 0 0 0 0 0 0 0 0 13.0531 1.32743 9.73451 0.442478 2.21239 9.0708 0 0 6.41593

M04628_2.00_shift8 (ZNF460)
; oligos_6nt_mkv4_m5 versus M04628_2.00 (ZNF460); m=42/105; ncol2=13; w=-3; offset=-3; strand=D; shift=8; score=0.552004; --------caaCgCCCCCCsm ; cor=; Ncor= a 0 0 0 0 0 0 0 0 15.4613 40.5896 59.0674 9.85222 9.84802 3.35946 5.41761 3.78198 7.64263 5.35308 2.81532 23.9674 32.4594 c 0 0 0 0 0 0 0 0 47.8803 24.8677 23.9378 78.9163 20.6687 89.6976 90.4063 89.099 86.2217 91.2301 90.2027 26.925 34.9563 g 0 0 0 0 0 0 0 0 23.5661 19.9546 9.63731 3.94089 48.693 1.34378 0.790068 4.33815 3.12164 1.93622 2.81532 40.8465 14.9813 t 0 0 0 0 0 0 0 0 13.0923 14.5881 7.35751 7.29064 20.7903 5.5991 3.386 2.78087 3.01399 1.48064 4.16667 8.26109 17.603

M04530_2.00_shift8 (ZNF444)
; oligos_6nt_mkv4_m5 versus M04530_2.00 (ZNF444); m=43/105; ncol2=16; w=-3; offset=-3; strand=D; shift=8; score=0.55161; --------ccrtCCCCCTCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 14.2547 10.0366 35.0522 21.7179 0.373886 0.461095 0.373778 0 0.78853 0.358372 0.387041 0.13002 0.628661 c 0 0 0 0 0 0 0 0 44.11 65.1368 5.80812 13.4159 99.0653 99.3228 99.1518 99.812 98.7814 0.874427 98.9392 99.7544 98.6998 g 0 0 0 0 0 0 0 0 21.5485 11.3731 56.9684 0.675169 0.345125 0.0432277 0 0 0.157706 0.0286697 0.0716743 0.0866802 0.171453 t 0 0 0 0 0 0 0 0 20.0868 13.4535 2.17126 64.191 0.215703 0.172911 0.474411 0.18797 0.272401 98.7385 0.602064 0.0288934 0.500071

M08302_2.00_shift10 (EGR2)
; oligos_6nt_mkv4_m5 versus M08302_2.00 (EGR2); m=44/105; ncol2=9; w=-1; offset=-1; strand=D; shift=10; score=0.550085; ----------CgCCCmCdC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0739645 23.1509 0.0739645 0.0739645 0.0739645 37.9438 0.0739645 28.4763 0.0739645 0 0 c 0 0 0 0 0 0 0 0 0 0 99.7781 0.0739645 99.7781 99.7781 84.0976 61.9083 99.7781 0.0739645 89.1272 0 0 g 0 0 0 0 0 0 0 0 0 0 0.0739645 55.6953 0.0739645 0.0739645 0.0739645 0.0739645 0.0739645 45.932 10.7249 0 0 t 0 0 0 0 0 0 0 0 0 0 0.0739645 21.0799 0.0739645 0.0739645 15.7544 0.0739645 0.0739645 25.5178 0.0739645 0 0

M04529_2.00_shift8 (ZNF444)
; oligos_6nt_mkv4_m5 versus M04529_2.00 (ZNF444); m=45/105; ncol2=16; w=-3; offset=-3; strand=D; shift=8; score=0.54893; --------ccGTCCCCCTCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 18.4334 8.68599 21.0837 15.4828 0.210084 0.26866 0.175152 0.0233454 0.687886 0.418118 0.0700853 0.21028 0.0935126 c 0 0 0 0 0 0 0 0 36.7144 67.4881 6.29233 11.9161 99.288 99.5211 99.5213 99.4631 99.1139 0.778165 99.5795 99.5794 99.6143 g 0 0 0 0 0 0 0 0 24.6717 10.7262 70.035 1.145 0.233427 0.093447 0 0.163418 0.0466364 0.139373 0 0.0350467 0.0935126 t 0 0 0 0 0 0 0 0 20.1806 13.0997 2.58903 71.4561 0.268441 0.116809 0.303596 0.350181 0.151568 98.6643 0.350426 0.175234 0.198714

M02921_2.00_shift12 (SP1)
; oligos_6nt_mkv4_m5 versus M02921_2.00 (SP1); m=46/105; ncol2=11; w=0; offset=1; strand=D; shift=12; score=0.541663; ------------rCCmCrCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 46.3014 19.2941 6.62971 47.0964 0.606612 30.0733 0 0.183038 0.127065 c 0 0 0 0 0 0 0 0 0 0 0 0 2.23634 70.7016 75.4216 47.7062 99.0294 0.867355 99.6642 99.6034 82.9733 g 0 0 0 0 0 0 0 0 0 0 0 0 43.205 3.37809 1.8711 4.96516 0.181984 48.8261 0.030525 0.0610128 0 t 0 0 0 0 0 0 0 0 0 0 0 0 8.25724 6.62625 16.0776 0.232288 0.181984 20.2333 0.30525 0.152532 16.8996

M07716_2.00_shift8 (ZNF398)
; oligos_6nt_mkv4_m5 versus M07716_2.00 (ZNF398); m=47/105; ncol2=14; w=-3; offset=-3; strand=D; shift=8; score=0.538508; --------CTsyyTCCYTCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 2.439 0 0 0 4.878 0 4.878 7.3171 0 4.878 7.3171 c 0 0 0 0 0 0 0 0 100 0 60.9756 56.0976 51.2195 19.5122 92.6829 70.7317 68.2927 0 92.6829 78.0488 87.8049 g 0 0 0 0 0 0 0 0 0 4.878 36.5854 2.439 7.3171 0 2.439 7.3171 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 95.122 0 41.4634 41.4634 80.4878 0 21.9512 26.8293 92.6829 7.3171 17.0732 4.878

M05827_2.00_rc_shift12 (XPA_rc)
; oligos_6nt_mkv4_m5 versus M05827_2.00_rc (XPA_rc); m=48/105; ncol2=11; w=0; offset=1; strand=R; shift=12; score=0.538126; ------------ccACCTCAC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 22 9.94983 69.9301 0.621118 4.44939 11.5681 0.353774 74.7664 0 c 0 0 0 0 0 0 0 0 0 0 0 0 43.125 66.8896 17.9196 99.3789 88.9878 5.65553 94.3396 10.8411 100 g 0 0 0 0 0 0 0 0 0 0 0 0 23.25 12.2074 8.12937 0 4.78309 14.2245 0 7.38318 0 t 0 0 0 0 0 0 0 0 0 0 0 0 11.625 10.9532 4.02098 0 1.77976 68.5518 5.3066 7.00935 0

M08363_2.00_shift7 (SP1)
; oligos_6nt_mkv4_m5 versus M08363_2.00 (SP1); m=49/105; ncol2=15; w=-4; offset=-4; strand=D; shift=7; score=0.537987; -------CCCcsscyCCkCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 3 5.8 1.4 20.2 13.6 6.4 12.6 12 13.8 3.2 21.6 0 1 1.8 c 0 0 0 0 0 0 0 73.2 71.2 84 55.2 26.4 44 67.8 52.6 80 93.2 0 96.6 97.6 87 g 0 0 0 0 0 0 0 6.8 9.2 2.4 9.2 42.4 31.8 5.6 8.8 2.8 0 40.8 1.4 1.4 0 t 0 0 0 0 0 0 0 17 13.8 12.2 15.4 17.6 17.8 14 26.6 3.4 3.6 37.6 2 0 11.2

M07758_2.00_shift12 (ZNF425)
; oligos_6nt_mkv4_m5 versus M07758_2.00 (ZNF425); m=50/105; ncol2=7; w=0; offset=1; strand=D; shift=12; score=0.535753; ------------sGCCCTC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 50 0 100 100 100 0 100 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 50 100 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0

M08868_2.00_shift8 (KLF5)
; oligos_6nt_mkv4_m5 versus M08868_2.00 (KLF5); m=51/105; ncol2=14; w=-3; offset=-3; strand=D; shift=8; score=0.530061; --------cccagCCmCaCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 14.8 22 15.4 37.8 15 9 2 40.6 1 63 1 1.6 0.6 c 0 0 0 0 0 0 0 0 49.4 50.2 60.6 19.2 11 83 96.4 54.4 94.2 0.8 93 96.8 94.4 g 0 0 0 0 0 0 0 0 21 12.4 13.6 18.2 63.4 3 0 1 0.2 18.4 3.6 0.8 0.4 t 0 0 0 0 0 0 0 0 14.8 15.4 10.4 24.8 10.6 5 1.6 4 4.6 17.8 2.4 0.8 4.6

M00130_2.00_shift9 (PLAGL1)
; oligos_6nt_mkv4_m5 versus M00130_2.00 (PLAGL1); m=52/105; ncol2=10; w=-2; offset=-2; strand=D; shift=9; score=0.529377; ---------ggggCCCCyy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 20.8508 18.281 15.0319 15.8555 3.84648 6.79701 0.915062 5.68744 24.3664 23.0968 0 0 c 0 0 0 0 0 0 0 0 0 21.4858 17.0451 19.1093 20.3589 93.4251 92.4328 75.2816 87.2049 33.8929 30.256 0 0 g 0 0 0 0 0 0 0 0 0 32.7005 42.3455 49.4112 55.3411 0.0979948 0.0170174 1.12889 3.05953 11.9796 20.0794 0 0 t 0 0 0 0 0 0 0 0 0 24.9629 22.3285 16.4476 8.44451 2.63046 0.75313 22.6744 4.04815 29.7612 26.5677 0 0

M00249_2.00_shift9 (WT1)
; oligos_6nt_mkv4_m5 versus M00249_2.00 (WT1); m=53/105; ncol2=11; w=-2; offset=-2; strand=D; shift=9; score=0.529087; ---------mCyCCCCCrca- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.7654 9.76681 2.48942 0.022935 0.022935 0.022935 9.70563 0.022935 25.8716 15.2561 32.3995 0 c 0 0 0 0 0 0 0 0 0 29.4673 70.6996 32.473 99.9312 99.9312 99.9312 90.2485 99.9312 15.4144 54.2316 22.5335 0 g 0 0 0 0 0 0 0 0 0 19.8837 9.76681 2.48942 0.022935 0.022935 0.022935 0.022935 0.022935 53.5748 15.2561 22.5335 0 t 0 0 0 0 0 0 0 0 0 19.8837 9.76681 62.5481 0.022935 0.022935 0.022935 0.022935 0.022935 5.13927 15.2561 22.5335 0

M07563_2.00_shift13 (ZNF263)
; oligos_6nt_mkv4_m5 versus M07563_2.00 (ZNF263); m=54/105; ncol2=9; w=0; offset=2; strand=D; shift=13; score=0.527056; -------------STCCTCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0.0652742 0.0652742 0.0652742 0.848564 0.0652742 0.0652742 0.0652742 5.5483 c 0 0 0 0 0 0 0 0 0 0 0 0 0 70.8225 0.0652742 82.5718 96.1488 0.0652742 99.8042 99.8042 75.5222 g 0 0 0 0 0 0 0 0 0 0 0 0 0 26.6971 0.0652742 17.2977 0.0652742 0.0652742 0.0652742 0.0652742 0.0652742 t 0 0 0 0 0 0 0 0 0 0 0 0 0 2.41514 99.8042 0.0652742 2.93734 99.8042 0.0652742 0.0652742 18.8642

M08358_2.00_shift8 (ZNF467)
; oligos_6nt_mkv4_m5 versus M08358_2.00 (ZNF467); m=55/105; ncol2=12; w=-3; offset=-3; strand=D; shift=8; score=0.521323; --------CCCTCCCCCyCC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1.11257 0.850785 0.065445 0.065445 0.065445 1.37435 0.065445 0.065445 1.37435 18.6518 2.94503 0.065445 0 c 0 0 0 0 0 0 0 0 74.411 87.7618 99.8037 0.065445 85.6675 93.5209 89.3325 84.3586 73.6257 34.8822 79.6466 92.7356 0 g 0 0 0 0 0 0 0 0 4.25393 0.065445 0.065445 0.850785 3.46859 0.065445 1.11257 0.065445 1.63613 10.2749 5.03927 0.065445 0 t 0 0 0 0 0 0 0 0 20.2225 11.322 0.065445 99.0183 10.7984 5.03927 9.48953 15.5105 23.3639 36.1911 12.3691 7.13351 0

M08906_2.00_shift12 (ZNF281)
; oligos_6nt_mkv4_m5 versus M08906_2.00 (ZNF281); m=56/105; ncol2=15; w=0; offset=1; strand=D; shift=12; score=0.518713; ------------yCCCCTCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 9.12863 2.48963 1.65975 1.03734 12.8631 12.6556 0.414938 0.622407 0.622407 c 0 0 0 0 0 0 0 0 0 0 0 0 27.1784 87.3444 94.1909 97.9253 74.0664 0.207469 96.473 97.9253 89.6266 g 0 0 0 0 0 0 0 0 0 0 0 0 24.8963 1.65975 0.622407 0 0.207469 10.9959 0.414938 0.414938 1.65975 t 0 0 0 0 0 0 0 0 0 0 0 0 38.7967 8.50622 3.52697 1.03734 12.8631 76.1411 2.6971 1.03734 8.09129

M08323_2.00_shift7 (KLF15)
; oligos_6nt_mkv4_m5 versus M08323_2.00 (KLF15); m=57/105; ncol2=15; w=-4; offset=-4; strand=D; shift=7; score=0.518705; -------ccCcggCyCCgCCY ; cor=; Ncor= a 0 0 0 0 0 0 0 5.4217 3.8153 6.4257 13.6546 16.2651 9.6386 2.6104 9.4378 8.2329 0 18.8755 0 0 0 c 0 0 0 0 0 0 0 65.261 64.0562 70.8835 62.4498 23.0924 24.8996 85.3414 47.5904 88.755 100 0 99.1968 100 70.8835 g 0 0 0 0 0 0 0 16.4659 17.8715 5.4217 8.8353 36.1446 46.1847 0 1.2048 3.012 0 58.8353 0.2008 0 0.8032 t 0 0 0 0 0 0 0 12.8514 14.257 17.2691 15.0602 24.498 19.2771 12.0482 41.7671 0 0 22.2892 0.6024 0 28.3133

M09008_2.00_shift8 (M09008_2.00)
; oligos_6nt_mkv4_m5 versus M09008_2.00; m=58/105; ncol2=14; w=-3; offset=-3; strand=D; shift=8; score=0.517569; --------cccrgCCmCrCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 17.1806 16.0793 24.0088 28.6344 12.7753 5.06608 5.28634 47.3568 0.660793 45.1542 0.220264 0 1.10132 c 0 0 0 0 0 0 0 0 64.3172 62.1145 53.304 13.4361 15.859 91.1894 91.1894 49.3392 98.4581 0.220264 99.1189 99.1189 98.4581 g 0 0 0 0 0 0 0 0 11.2335 17.1806 12.7753 40.0881 64.5374 1.76211 0.660793 0.881057 0 43.6123 0 0.440529 0 t 0 0 0 0 0 0 0 0 7.26872 4.62555 9.91189 17.8414 6.82819 1.98238 2.86344 2.42291 0.881057 11.0132 0.660793 0.440529 0.440529

M08326_2.00_shift13 (SP2)
; oligos_6nt_mkv4_m5 versus M08326_2.00 (SP2); m=59/105; ncol2=9; w=0; offset=2; strand=D; shift=13; score=0.51256; -------------cCCCGCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0.083612 6.77258 2.42475 0.083612 6.43813 0.083612 0.083612 0.083612 c 0 0 0 0 0 0 0 0 0 0 0 0 0 63.6288 74.3311 97.408 99.7492 0.083612 99.7492 99.7492 99.7492 g 0 0 0 0 0 0 0 0 0 0 0 0 0 14.7993 0.083612 0.083612 0.083612 93.3946 0.083612 0.083612 0.083612 t 0 0 0 0 0 0 0 0 0 0 0 0 0 21.4883 18.8127 0.083612 0.083612 0.083612 0.083612 0.083612 0.083612

M08871_2.00_shift8 (KLF1)
; oligos_6nt_mkv4_m5 versus M08871_2.00 (KLF1); m=60/105; ncol2=14; w=-3; offset=-3; strand=D; shift=8; score=0.512368; --------cccrGCCmCrCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10.2249 16.3599 18.6094 28.0164 8.58896 8.99796 5.31697 42.9448 0.817996 38.0368 0.204499 0.613497 0.408998 c 0 0 0 0 0 0 0 0 62.3722 52.9652 47.2393 9.40695 16.7689 86.2986 90.3885 53.5787 97.7505 0 99.7955 98.773 98.9775 g 0 0 0 0 0 0 0 0 16.1554 20.2454 19.8364 45.8078 68.5072 2.24949 0.408998 1.02249 0 52.7607 0 0.408998 0.204499 t 0 0 0 0 0 0 0 0 11.2474 10.4294 14.3149 16.7689 6.13497 2.45399 3.88548 2.45399 1.43149 9.20245 0 0.204499 0.408998

M08996_2.00_shift7 (M08996_2.00)
; oligos_6nt_mkv4_m5 versus M08996_2.00; m=61/105; ncol2=14; w=-4; offset=-4; strand=D; shift=7; score=0.507968; -------cyCCgCCCmCgCmc ; cor=; Ncor= a 0 0 0 0 0 0 0 10.5691 10.3659 16.8699 0.406504 23.9837 0 0.609756 0 44.9187 1.01626 16.2602 1.42276 35.1626 10.7724 c 0 0 0 0 0 0 0 57.7236 54.878 77.8455 98.9837 0 100 98.9837 96.3415 54.4715 98.7805 1.21951 89.6341 33.9431 47.1545 g 0 0 0 0 0 0 0 9.7561 8.53659 2.84553 0.609756 61.1789 0 0.406504 0.203252 0.203252 0 67.0732 3.86179 17.2764 19.3089 t 0 0 0 0 0 0 0 21.9512 26.2195 2.43902 0 14.8374 0 0 3.45528 0.406504 0.203252 15.4472 5.0813 13.6179 22.7642

M08296_2.00_shift9 (SP4)
; oligos_6nt_mkv4_m5 versus M08296_2.00 (SP4); m=62/105; ncol2=15; w=-2; offset=-2; strand=D; shift=9; score=0.493895; ---------yhgGCyCCgCCY ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 15.7895 32.5911 24.2915 11.5385 1.8219 5.2632 12.1457 0 12.5506 0.2024 0 0 c 0 0 0 0 0 0 0 0 0 42.5101 26.5182 18.8259 11.1336 75.9109 56.2753 83.4008 98.583 0 99.7976 99.7976 68.6235 g 0 0 0 0 0 0 0 0 0 12.9555 14.9798 48.583 69.8381 7.085 3.4413 2.6316 1.417 67.6113 0 0 1.0121 t 0 0 0 0 0 0 0 0 0 28.7449 25.9109 8.2996 7.4899 15.1822 35.0202 1.8219 0 19.8381 0 0.2024 30.3644

M08999_2.00_shift7 (M08999_2.00)
; oligos_6nt_mkv4_m5 versus M08999_2.00; m=63/105; ncol2=15; w=-4; offset=-4; strand=D; shift=7; score=0.485994; -------CCCCTCCCCCaccc ; cor=; Ncor= a 0 0 0 0 0 0 0 1.8 1 0 8.4 16.6 0 0 0 0 0 62.8 18.4 8.4 9.8 c 0 0 0 0 0 0 0 95.8 98.6 99.8 86.6 0.4 100 100 98.8 99.2 100 23.6 61.6 67.4 60 g 0 0 0 0 0 0 0 0.6 0 0 0 3.8 0 0 0 0 0 2.8 6.8 10.6 16 t 0 0 0 0 0 0 0 1.8 0.4 0.2 5 79.2 0 0 1.2 0.8 0 10.8 13.2 13.6 14.2

M08967_2.00_shift10 (M08967_2.00)
; oligos_6nt_mkv4_m5 versus M08967_2.00; m=64/105; ncol2=19; w=-1; offset=-1; strand=D; shift=10; score=0.482875; ----------cckCCCCkCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 7.6 9 7.2 0.8 3.4 1.2 2.8 6 0.2 1.8 3.4 c 0 0 0 0 0 0 0 0 0 0 58.2 53.2 12.8 87 82.2 93.2 84.4 1.2 98 88.4 77.6 g 0 0 0 0 0 0 0 0 0 0 21 14.4 44.2 4.4 0.4 1.6 0.6 29.2 0.4 1.4 2.8 t 0 0 0 0 0 0 0 0 0 0 13.2 23.4 35.8 7.8 14 4 12.2 63.6 1.4 8.4 16.2

M00139_2.00_shift9 (M00139_2.00)
; oligos_6nt_mkv4_m5 versus M00139_2.00; m=65/105; ncol2=10; w=-2; offset=-2; strand=D; shift=9; score=0.482152; ---------cmwCCCCCmh-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 17.3942 26.206 44.9152 3.32464 2.67398 1.01422 1.97029 2.08507 36.1848 29.3413 0 0 c 0 0 0 0 0 0 0 0 0 56.0438 41.9294 5.39124 92.8851 95.9251 96.9428 95.4098 95.0881 40.3922 35.4809 0 0 g 0 0 0 0 0 0 0 0 0 13.0154 12.2557 15.4063 2.29645 0.721493 0.138639 0.801061 1.20298 5.63298 9.66968 0 0 t 0 0 0 0 0 0 0 0 0 13.5466 19.609 34.2873 1.49386 0.679476 1.90431 1.81881 1.62386 17.79 25.5081 0 0

M07844_2.00_shift6 (ZNF263)
; oligos_6nt_mkv4_m5 versus M07844_2.00 (ZNF263); m=66/105; ncol2=15; w=-5; offset=-5; strand=D; shift=6; score=0.477742; ------ccycyycsTCCTCCC ; cor=; Ncor= a 0 0 0 0 0 0 12.5843 8.5393 12.1348 8.98879 15.0562 4.0449 19.5506 3.5955 1.3483 0.2247 2.2472 0 0 1.7978 6.9663 c 0 0 0 0 0 0 57.3034 58.2022 32.3596 64.4943 29.4382 45.618 59.5505 55.2809 6.2921 78.6517 97.3034 0 95.5056 95.5055 69.6629 g 0 0 0 0 0 0 13.2584 12.5843 10.3371 17.0787 17.5281 19.3258 12.3596 31.236 0 19.3258 0 0 0.6742 0.674199 1.7978 t 0 0 0 0 0 0 16.8539 20.6742 45.1685 9.43819 37.9775 31.0112 8.53929 9.8876 92.3596 1.7978 0.4494 100 3.8202 2.0225 21.573

M08299_2.00_shift8 (KLF12)
; oligos_6nt_mkv4_m5 versus M08299_2.00 (KLF12); m=67/105; ncol2=15; w=-3; offset=-3; strand=D; shift=8; score=0.477676; --------cccgGCCmCGCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 7.6152 9.2184 19.8397 16.8337 12.2244 6.2124 4.4088 30.6613 0 14.2285 0 0 0 c 0 0 0 0 0 0 0 0 60.7214 55.3106 39.479 23.6473 5.01 87.3747 87.1743 63.3267 100 0.2004 100 100 86.7735 g 0 0 0 0 0 0 0 0 20.2405 17.2345 20.4409 49.8998 77.7555 3.8076 0.4008 5.6112 0 78.5571 0 0 0 t 0 0 0 0 0 0 0 0 11.4228 18.2365 20.2405 9.6192 5.01 2.6052 8.016 0.4008 0 7.014 0 0 13.2265

M07937_2.00_shift7 (ZBTB7A)
; oligos_6nt_mkv4_m5 versus M07937_2.00 (ZBTB7A); m=68/105; ncol2=15; w=-4; offset=-4; strand=D; shift=7; score=0.476386; -------cssmGmCCCyyscc ; cor=; Ncor= a 0 0 0 0 0 0 0 5.2 19.2 17.4 41 2 56.6 0 0.4 5 0 13 14.2 8.2 6.4 c 0 0 0 0 0 0 0 61.6 37 27.4 33.6 0 43.4 98.8 99.2 92.4 65.8 37 36.4 57.8 55.8 g 0 0 0 0 0 0 0 23.8 26.4 49.8 21.2 96 0 0 0 0 0.4 13 36.6 20.2 23 t 0 0 0 0 0 0 0 9.4 17.4 5.4 4.2 2 0 1.2 0.4 2.6 33.8 37 12.8 13.8 14.8

M08863_2.00_shift7 (MZF1)
; oligos_6nt_mkv4_m5 versus M08863_2.00 (MZF1); m=69/105; ncol2=13; w=-4; offset=-4; strand=D; shift=7; score=0.470755; -------yymmwTCCCywyy- ; cor=; Ncor= a 0 0 0 0 0 0 0 12 11.6 30 54.4 47.8 0.4 0.4 0.4 13 0.6 27.2 8.2 12.2 0 c 0 0 0 0 0 0 0 36 47.8 37.6 26 10.6 0.4 98.4 97.4 85.4 61 24.6 46.4 37.8 0 g 0 0 0 0 0 0 0 17.2 11.4 14 14.4 1 0.4 0.6 0 0.4 0 3.6 11 13.4 0 t 0 0 0 0 0 0 0 34.8 29.2 18.4 5.2 40.6 98.8 0.6 2.2 1.2 38.4 44.6 34.4 36.6 0

M08293_2.00_shift7 (KLF1)
; oligos_6nt_mkv4_m5 versus M08293_2.00 (KLF1); m=70/105; ncol2=15; w=-4; offset=-4; strand=D; shift=7; score=0.470586; -------ccccggCCmCrCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 15 14.2 22 17 21.6 15.4 9.4 5.2 46.8 0 40.6 0 0 0 c 0 0 0 0 0 0 0 44.6 54.4 45.4 43 16.8 14.2 80.8 86.2 51.6 100 0 100 100 98.6 g 0 0 0 0 0 0 0 21.6 20.8 17.6 23.4 46.2 64 5.8 0.2 1.6 0 51.8 0 0 0 t 0 0 0 0 0 0 0 18.8 10.6 15 16.6 15.4 6.4 4 8.4 0 0 7.6 0 0 1.4

M02935_2.00_shift9 (M02935_2.00)
; oligos_6nt_mkv4_m5 versus M02935_2.00; m=71/105; ncol2=10; w=-2; offset=-2; strand=D; shift=9; score=0.468903; ---------mCCCCCCCac-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.3121 18.5904 16.9679 4.701 3.83543 6.26236 7.45322 11.3504 67.0956 16.2721 0 0 c 0 0 0 0 0 0 0 0 0 34.1858 70.7181 77.5219 91.9115 92.7127 87.6401 84.3324 77.3865 10.4971 53.3507 0 0 g 0 0 0 0 0 0 0 0 0 22.1888 2.79255 0.670554 0.829589 0.27894 1.35135 3.8059 3.11409 6.98965 7.0626 0 0 t 0 0 0 0 0 0 0 0 0 13.3133 7.89894 4.83965 2.5579 3.17294 4.74621 4.4085 8.14901 15.4176 23.3146 0 0

M02663_2.00_shift12 (MZF1)
; oligos_6nt_mkv4_m5 versus M02663_2.00 (MZF1); m=72/105; ncol2=6; w=0; offset=1; strand=D; shift=12; score=0.468707; ------------TCCCCr--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 5 40 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 10 100 95 90 95 20 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 90 0 0 10 0 15 0 0 0

M07626_2.00_shift11 (ZNF282)
; oligos_6nt_mkv4_m5 versus M07626_2.00 (ZNF282); m=73/105; ncol2=6; w=0; offset=0; strand=D; shift=11; score=0.464313; -----------CTCCCs---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 99.7614 0.0795234 99.7614 99.7614 99.7614 56.9037 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 42.9372 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0.0795234 99.7614 0.0795234 0.0795234 0.0795234 0.0795234 0 0 0 0

M08878_2.00_shift10 (ZBTB17)
; oligos_6nt_mkv4_m5 versus M08878_2.00 (ZBTB17); m=74/105; ncol2=19; w=-1; offset=-1; strand=D; shift=10; score=0.462209; ----------yykYCCcTCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 12 18.6 6 2.6 2 4.6 23.2 10.2 0.4 5.2 4.4 c 0 0 0 0 0 0 0 0 0 0 50.8 33.2 13.6 71 72.6 88.6 53.8 0.2 85 79 68.4 g 0 0 0 0 0 0 0 0 0 0 11.4 6.2 27.6 0.8 2.2 1.6 3.2 20 7.4 0.6 3.4 t 0 0 0 0 0 0 0 0 0 0 25.8 42 52.8 25.6 23.2 5.2 19.8 69.6 7.2 15.2 23.8

M08965_2.00_shift12 (M08965_2.00)
; oligos_6nt_mkv4_m5 versus M08965_2.00; m=75/105; ncol2=15; w=0; offset=1; strand=D; shift=12; score=0.449103; ------------gCCmCdCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 12.4248 5.01002 0.801603 27.4549 1.2024 42.6854 0.400802 0.200401 0.801603 c 0 0 0 0 0 0 0 0 0 0 0 0 7.81563 85.3707 94.3888 60.9218 94.3888 0.200401 97.7956 99.1984 94.7896 g 0 0 0 0 0 0 0 0 0 0 0 0 59.519 3.80762 0.601202 3.00601 1.002 30.8617 0.801603 0.200401 0 t 0 0 0 0 0 0 0 0 0 0 0 0 20.2405 5.81162 4.20842 8.61723 3.40681 26.2525 1.002 0.400802 4.40882

M08994_2.00_shift12 (M08994_2.00)
; oligos_6nt_mkv4_m5 versus M08994_2.00; m=76/105; ncol2=14; w=0; offset=1; strand=D; shift=12; score=0.447387; ------------ccyCCrCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 10.6 17.6 11 19 3.2 32 0 1 0.8 c 0 0 0 0 0 0 0 0 0 0 0 0 50 52.8 54.2 73 92.4 1.4 98 98.4 92.6 g 0 0 0 0 0 0 0 0 0 0 0 0 17 10.8 9.6 0.8 1.6 41.8 1.8 0.4 0.4 t 0 0 0 0 0 0 0 0 0 0 0 0 22.4 18.8 25.2 7.2 2.8 24.8 0.2 0.2 6.2

M00223_2.00_shift8 (KLF1)
; oligos_6nt_mkv4_m5 versus M00223_2.00 (KLF1); m=77/105; ncol2=9; w=-3; offset=-3; strand=D; shift=8; score=0.443508; --------wwybmCCCC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.7492 26.1893 24.8111 20.2632 32.7309 7.58489 13.0131 16.1177 2.67489 0 0 0 0 c 0 0 0 0 0 0 0 0 24.0083 24.9121 25.3123 28.4688 30.2144 70.5385 84.4328 79.037 78.5636 0 0 0 0 g 0 0 0 0 0 0 0 0 24.4933 23.2279 24.5642 25.2495 23.0651 0.417345 1.38535 4.22034 1.05539 0 0 0 0 t 0 0 0 0 0 0 0 0 25.7492 25.6707 25.3123 26.0185 13.9897 21.4593 1.16877 0.62495 17.7061 0 0 0 0

M08907_2.00_shift3 (KLF15)
; oligos_6nt_mkv4_m5 versus M08907_2.00 (KLF15); m=78/105; ncol2=19; w=-8; offset=-8; strand=D; shift=3; score=0.442015; ---CCycyCCcybCyCCkCCY ; cor=; Ncor= a 0 0 0 6.88935 7.51566 14.6138 5.21921 3.34029 1.25261 3.13152 13.9875 20.8768 4.38413 0.835073 5.21921 8.76827 0.626305 10.8559 0.208768 0 3.34029 c 0 0 0 73.0689 74.3215 44.6764 66.5971 57.62 77.0355 79.7495 58.2463 28.6013 29.8539 86.8476 42.38 88.5177 91.858 0 97.4948 99.7912 69.5198 g 0 0 0 1.67015 9.39457 12.9436 10.4384 13.3612 3.13152 2.08768 4.38413 16.0752 34.4468 0.626305 3.13152 1.46138 0.626305 35.4906 0.626305 0.208768 1.25261 t 0 0 0 18.3716 8.76827 27.7662 17.7453 25.6785 18.5804 15.0313 23.382 34.4468 31.3152 11.691 49.2693 1.25261 6.88935 53.6534 1.67015 0 25.8873

M08987_2.00_shift3 (M08987_2.00)
; oligos_6nt_mkv4_m5 versus M08987_2.00; m=79/105; ncol2=19; w=-8; offset=-8; strand=D; shift=3; score=0.442015; ---CCycyCCcybCyCCkCCY ; cor=; Ncor= a 0 0 0 6.88935 7.51566 14.6138 5.21921 3.34029 1.25261 3.13152 13.9875 20.8768 4.38413 0.835073 5.21921 8.76827 0.626305 10.8559 0.208768 0 3.34029 c 0 0 0 73.0689 74.3215 44.6764 66.5971 57.62 77.0355 79.7495 58.2463 28.6013 29.8539 86.8476 42.38 88.5177 91.858 0 97.4948 99.7912 69.5198 g 0 0 0 1.67015 9.39457 12.9436 10.4384 13.3612 3.13152 2.08768 4.38413 16.0752 34.4468 0.626305 3.13152 1.46138 0.626305 35.4906 0.626305 0.208768 1.25261 t 0 0 0 18.3716 8.76827 27.7662 17.7453 25.6785 18.5804 15.0313 23.382 34.4468 31.3152 11.691 49.2693 1.25261 6.88935 53.6534 1.67015 0 25.8873

M02932_2.00_shift7 (M02932_2.00)
; oligos_6nt_mkv4_m5 versus M02932_2.00; m=80/105; ncol2=16; w=-4; offset=-4; strand=D; shift=7; score=0.438479; -------mhmCGCCCmCkCAm ; cor=; Ncor= a 0 0 0 0 0 0 0 32.3142 32.2785 61.8182 0 7.54445 0 0.157812 0 51.7114 0.314961 0.422833 0.157978 89.1816 44.2511 c 0 0 0 0 0 0 0 32.4196 30.9072 36.6753 99.6845 0.432484 99.9473 99.737 100 48.1306 99.5276 16.7321 99.842 5.73848 32.2785 g 0 0 0 0 0 0 0 11.3337 3.69198 0.363636 0.0525762 91.11 0.0527148 0.105208 0 0.157978 0 25.5814 0 3.62183 4.95781 t 0 0 0 0 0 0 0 23.9325 33.1224 1.14286 0.262881 0.913023 0 0 0 0 0.15748 57.2637 0 1.45814 18.5127

M08260_2.00_shift1 (ZNF467)
; oligos_6nt_mkv4_m5 versus M08260_2.00 (ZNF467); m=81/105; ncol2=21; w=-10; offset=-10; strand=D; shift=1; score=0.432626; -yyyCyyyCccyycCCCTCCC ; cor=; Ncor= a 0 4.5833 3.125 6.4583 3.75 5.2083 6.875 5.625 4.5833 8.5417 10.4167 8.5417 12.2917 3.75 2.0833 0 2.9167 6.0417 0 2.0833 5 c 0 51.875 60 52.5 73.3333 60.4167 62.7083 52.5 68.125 63.75 64.5833 38.5417 34.5833 60.4167 76.4583 87.7083 85 0 91.4583 91.25 83.3333 g 0 9.5833 10.4167 2.7083 6.25 2.2917 3.9583 6.6667 6.25 3.9583 5.625 11.6667 19.5833 12.9167 4.375 2.2917 0.4167 2.5 3.125 0.4167 1.4583 t 0 33.9583 26.4583 38.3333 16.6667 32.0833 26.4583 35.2083 21.0417 23.75 19.375 41.25 33.5417 22.9167 17.0833 10 11.6667 91.4583 5.4167 6.25 10.2083

M08968_2.00_shift7 (M08968_2.00)
; oligos_6nt_mkv4_m5 versus M08968_2.00; m=82/105; ncol2=20; w=-4; offset=-4; strand=D; shift=7; score=0.431657; -------CycCycCyCCTCCY ; cor=; Ncor= a 0 0 0 0 0 0 0 2.6 5 3.8 6 9.2 5.6 1.2 3.8 4.4 1 2.2 0 1.2 0.8 c 0 0 0 0 0 0 0 68 47.2 67.4 75.2 38.8 51.6 71.4 38.6 90.8 97 0.4 97.2 95.6 71.4 g 0 0 0 0 0 0 0 8 10.8 9.4 6.8 21.4 18.6 3.6 10 1.2 0.8 14.8 1.6 2.6 2.6 t 0 0 0 0 0 0 0 21.4 37 19.4 12 30.6 24.2 23.8 47.6 3.6 1.2 82.6 1.2 0.6 25.2

M08937_2.00_shift7 (WT1)
; oligos_6nt_mkv4_m5 versus M08937_2.00 (WT1); m=83/105; ncol2=20; w=-4; offset=-4; strand=D; shift=7; score=0.431657; -------CycCycCyCCTCCY ; cor=; Ncor= a 0 0 0 0 0 0 0 2.6 5 3.8 6 9.2 5.6 1.2 3.8 4.4 1 2.2 0 1.2 0.8 c 0 0 0 0 0 0 0 68 47.2 67.4 75.2 38.8 51.6 71.4 38.6 90.8 97 0.4 97.2 95.6 71.4 g 0 0 0 0 0 0 0 8 10.8 9.4 6.8 21.4 18.6 3.6 10 1.2 0.8 14.8 1.6 2.6 2.6 t 0 0 0 0 0 0 0 21.4 37 19.4 12 30.6 24.2 23.8 47.6 3.6 1.2 82.6 1.2 0.6 25.2

M08025_2.00_shift13 (M08025_2.00)
; oligos_6nt_mkv4_m5 versus M08025_2.00; m=84/105; ncol2=15; w=0; offset=2; strand=D; shift=13; score=0.430957; -------------CCCCTCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 2.8571 0 0 6.66669 22.8571 0 0.9524 0.9524 c 0 0 0 0 0 0 0 0 0 0 0 0 0 94.2857 82.8571 100 80.9523 0.9524 100 98.0952 93.3333 g 0 0 0 0 0 0 0 0 0 0 0 0 0 1.9048 0 0 0 4.7619 0 0 0.9524 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0.9524 17.1429 0 12.381 71.4286 0 0.9524 4.7619

M07774_2.00_shift14 (ZNF10)
; oligos_6nt_mkv4_m5 versus M07774_2.00 (ZNF10); m=85/105; ncol2=9; w=0; offset=3; strand=D; shift=14; score=0.429948; --------------CCCTACC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.0609756 0.0609756 1.28049 2.0122 77.1341 0.54878 0.0609756 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 97.622 99.5732 85.9146 0.54878 2.5 97.1341 99.8171 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.304878 0.0609756 0.0609756 0.54878 5.91463 0.0609756 0.0609756 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.0122 0.304878 12.7439 96.8902 14.4512 2.2561 0.0609756

M01171_2.00_shift8 (PLAGL2)
; oligos_6nt_mkv4_m5 versus M01171_2.00 (PLAGL2); m=86/105; ncol2=10; w=-3; offset=-3; strand=D; shift=8; score=0.426883; --------tGGGCCCCCt--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 22.4168 3.97406 0.00470066 0.00470066 0.00470066 0.00470066 0.00470066 0.00470066 9.06574 21.0306 0 0 0 c 0 0 0 0 0 0 0 0 22.4168 3.97406 0.00470066 15.1216 79.9421 99.9859 99.9859 92.5535 68.4975 21.0306 0 0 0 g 0 0 0 0 0 0 0 0 22.4168 81.3147 99.9859 84.869 20.0485 0.00470066 0.00470066 0.00470066 2.58787 21.0306 0 0 0 t 0 0 0 0 0 0 0 0 32.7495 10.7372 0 0 0 0 0 7.43708 19.8489 36.9081 0 0 0

M08884_2.00_shift7 (EGR2)
; oligos_6nt_mkv4_m5 versus M08884_2.00 (EGR2); m=87/105; ncol2=18; w=-4; offset=-4; strand=D; shift=7; score=0.42295; -------yyCCdCCCmCwCmy ; cor=; Ncor= a 0 0 0 0 0 0 0 13.6 8.2 10.8 6.2 34.6 2 6 1.8 48.6 1.4 39.6 5.6 29.6 7 c 0 0 0 0 0 0 0 56.2 50.2 78.2 87.4 2.2 91.6 89 79.4 46.2 93 4.4 76.6 45 50.6 g 0 0 0 0 0 0 0 4.8 7.4 3.4 0.6 28.2 4 1.4 0.6 1.2 2.2 19 10.2 10.4 10.4 t 0 0 0 0 0 0 0 25.4 34.2 7.6 5.8 35 2.4 3.6 18.2 4 3.4 37 7.6 15 32

M08979_2.00_shift14 (M08979_2.00)
; oligos_6nt_mkv4_m5 versus M08979_2.00; m=88/105; ncol2=10; w=0; offset=3; strand=D; shift=14; score=0.421679; --------------CcCwCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.4 22.6 0.4 58.6 1.4 1.2 1.4 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 81.4 66 98.8 1 80.4 98.2 97.2 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.4 1.6 0.2 3 16.2 0.4 0.2 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11.8 9.8 0.6 37.4 2 0.2 1.2

M08866_2.00_shift14 (SALL4)
; oligos_6nt_mkv4_m5 versus M08866_2.00 (SALL4); m=89/105; ncol2=10; w=0; offset=3; strand=D; shift=14; score=0.421679; --------------CcCwCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.4 22.6 0.4 58.6 1.4 1.2 1.4 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 81.4 66 98.8 1 80.4 98.2 97.2 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.4 1.6 0.2 3 16.2 0.4 0.2 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11.8 9.8 0.6 37.4 2 0.2 1.2

M07668_2.00_shift8 (ZNF530)
; oligos_6nt_mkv4_m5 versus M07668_2.00 (ZNF530); m=90/105; ncol2=18; w=-3; offset=-3; strand=D; shift=8; score=0.420491; --------yscyGsCCCTykC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10.9944 10.7143 11.2745 13.2353 7.07283 4.55182 0.630252 0.070028 0.070028 2.31092 14.0756 8.7535 0.35014 c 0 0 0 0 0 0 0 0 32.563 39.0056 65.6162 30.6022 4.27171 60.014 96.7087 93.6275 99.5098 8.47339 26.1204 6.51261 99.5098 g 0 0 0 0 0 0 0 0 21.6387 27.521 12.6751 17.1569 75.7003 33.1232 0.070028 0.070028 0.070028 0.070028 19.3978 30.8824 0.070028 t 0 0 0 0 0 0 0 0 34.8039 22.7591 10.4342 39.0056 12.9552 2.31092 2.59104 6.23249 0.35014 89.1457 40.4062 53.8515 0.070028

M08880_2.00_shift5 (KLF9)
; oligos_6nt_mkv4_m5 versus M08880_2.00 (KLF9); m=91/105; ncol2=15; w=-6; offset=-6; strand=D; shift=5; score=0.420403; -----gGcCMCGCCCmCyyc- ; cor=; Ncor= a 0 0 0 0 0 14.4531 10.9375 16.0156 1.5625 71.875 0 23.0469 0 1.5625 0 32.0312 2.73438 9.76562 9.375 11.3281 0 c 0 0 0 0 0 20.3125 3.125 67.1875 97.6562 26.1719 100 0.390625 99.2188 98.0469 98.4375 63.2812 80.0781 26.5625 46.0938 63.6719 0 g 0 0 0 0 0 52.3438 84.375 11.7188 0.390625 1.5625 0 75.7812 0.78125 0.390625 0 0.390625 1.17188 13.6719 18.75 18.75 0 t 0 0 0 0 0 12.8906 1.5625 5.07812 0.390625 0.390625 0 0.78125 0 0 1.5625 4.29688 16.0156 50 25.7812 6.25 0

M07645_2.00_shift16 (ZNF169)
; oligos_6nt_mkv4_m5 versus M07645_2.00 (ZNF169); m=92/105; ncol2=6; w=0; offset=5; strand=D; shift=16; score=0.420307; ----------------CTCCy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.0886525 0.0886525 0.0886525 0.0886525 0.0886525 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99.734 0.0886525 99.734 99.734 41.9326 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.0886525 0.0886525 0.0886525 0.0886525 0.0886525 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.0886525 99.734 0.0886525 0.0886525 57.8901

M08882_2.00_shift6 (EGR1)
; oligos_6nt_mkv4_m5 versus M08882_2.00 (EGR1); m=93/105; ncol2=17; w=-5; offset=-5; strand=D; shift=6; score=0.418947; ------yyyCCrCCCmCgCmy ; cor=; Ncor= a 0 0 0 0 0 0 11.8 15 12.8 17.2 6 30 1.4 2.2 1.4 55.4 4 21.2 5 29.8 8.2 c 0 0 0 0 0 0 43.6 45.6 40.6 69.6 84.2 0.4 93 95.8 89.2 41 87 4.6 80.8 35.4 46 g 0 0 0 0 0 0 18.2 8.2 12.8 2.2 1 47.6 3.2 0.4 0.2 0.4 3.4 50.6 3 11.2 18 t 0 0 0 0 0 0 26.4 31.2 33.8 11 8.8 22 2.4 1.6 9.2 3.2 5.6 23.6 11.2 23.6 27.8

M08857_2.00_shift6 (KLF6)
; oligos_6nt_mkv4_m5 versus M08857_2.00 (KLF6); m=94/105; ncol2=19; w=-5; offset=-5; strand=D; shift=6; score=0.418244; ------yyccmdgCCMCdCCC ; cor=; Ncor= a 0 0 0 0 0 0 5.24194 10.6855 6.45161 11.6935 25.8065 25 10.8871 4.6371 4.23387 26.0081 2.21774 28.2258 1.20968 2.01613 13.1048 c 0 0 0 0 0 0 45.5645 43.3468 60.2823 60.8871 52.2177 13.7097 20.7661 83.6694 68.3468 68.9516 85.4839 0 89.1129 95.5645 81.4516 g 0 0 0 0 0 0 23.3871 11.0887 17.1371 12.7016 15.7258 31.8548 45.3629 3.02419 6.45161 2.21774 0.604839 45.7661 5.24194 0 0.604839 t 0 0 0 0 0 0 25.8065 34.879 16.129 14.7177 6.25 29.4355 22.9839 8.66935 20.9677 2.82258 11.6935 26.0081 4.43548 2.41935 4.83871

M08962_2.00_shift6 (M08962_2.00)
; oligos_6nt_mkv4_m5 versus M08962_2.00; m=95/105; ncol2=19; w=-5; offset=-5; strand=D; shift=6; score=0.418244; ------yyccmdgCCMCdCCC ; cor=; Ncor= a 0 0 0 0 0 0 5.24194 10.6855 6.45161 11.6935 25.8065 25 10.8871 4.6371 4.23387 26.0081 2.21774 28.2258 1.20968 2.01613 13.1048 c 0 0 0 0 0 0 45.5645 43.3468 60.2823 60.8871 52.2177 13.7097 20.7661 83.6694 68.3468 68.9516 85.4839 0 89.1129 95.5645 81.4516 g 0 0 0 0 0 0 23.3871 11.0887 17.1371 12.7016 15.7258 31.8548 45.3629 3.02419 6.45161 2.21774 0.604839 45.7661 5.24194 0 0.604839 t 0 0 0 0 0 0 25.8065 34.879 16.129 14.7177 6.25 29.4355 22.9839 8.66935 20.9677 2.82258 11.6935 26.0081 4.43548 2.41935 4.83871

M08092_2.00_shift12 (SP2)
; oligos_6nt_mkv4_m5 versus M08092_2.00 (SP2); m=96/105; ncol2=15; w=0; offset=1; strand=D; shift=12; score=0.418074; ------------gyCCCGCCy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 9.48992 2.31317 3.08422 0 0 10.3203 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 15.0059 48.102 82.2064 99.5848 97.4496 0 100 98.2206 65.7177 g 0 0 0 0 0 0 0 0 0 0 0 0 60.9727 15.2432 0.059312 0.415184 0 75.9193 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 14.5314 34.3416 14.6501 0 2.55042 13.7604 0 1.77936 34.2823

M00242_2.00_shift9 (KLF11)
; oligos_6nt_mkv4_m5 versus M00242_2.00 (KLF11); m=97/105; ncol2=8; w=-2; offset=-2; strand=D; shift=9; score=0.415791; ---------mCGCCCCC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 35.6838 0.052521 5.30462 5.30462 0.052521 0.052521 21.0609 0.0766871 0 0 0 0 c 0 0 0 0 0 0 0 0 0 64.1738 99.8424 10.5567 94.5903 94.5903 99.8424 78.834 92.1012 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0.0712251 0.052521 84.0861 0.052521 5.30462 0.052521 0.052521 0.0766871 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0.0712251 0.052521 0.052521 0.052521 0.052521 0.052521 0.052521 7.7454 0 0 0 0

M00765_2.00_shift9 (M00765_2.00)
; oligos_6nt_mkv4_m5 versus M00765_2.00; m=98/105; ncol2=9; w=-2; offset=-2; strand=D; shift=9; score=0.413595; ---------cmCGCCCMc--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 17.435 41.7838 0.00455751 0.00455751 0.00455751 0.00455751 0.00455751 30.5774 7.56959 0 0 0 c 0 0 0 0 0 0 0 0 0 47.6951 58.2071 99.9863 8.49137 99.9863 91.4995 99.9863 69.4134 59.8878 0 0 0 g 0 0 0 0 0 0 0 0 0 17.435 0.00455751 0.00455751 91.4995 0.00455751 8.49137 0.00455751 0.00455751 7.56959 0 0 0 t 0 0 0 0 0 0 0 0 0 17.435 0 0 0 0 0 0 0 24.973 0 0 0

M00241_2.00_shift9 (KLF11)
; oligos_6nt_mkv4_m5 versus M00241_2.00 (KLF11); m=99/105; ncol2=8; w=-2; offset=-2; strand=D; shift=9; score=0.413337; ---------mCGCCCCC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 38.4202 0.0499002 10.0299 5.03992 5.03992 0.0499002 25 0.0664894 0 0 0 0 c 0 0 0 0 0 0 0 0 0 61.4264 99.8503 10.0299 94.8603 89.8703 99.8503 74.9002 93.1516 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0.0766871 0.0499002 79.8902 0.0499002 5.03992 0.0499002 0.0499002 0.0664894 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0.0766871 0.0499002 0.0499002 0.0499002 0.0499002 0.0499002 0.0499002 6.71543 0 0 0 0

M00632_2.00_shift8 (M00632_2.00)
; oligos_6nt_mkv4_m5 versus M00632_2.00; m=100/105; ncol2=10; w=-3; offset=-3; strand=D; shift=8; score=0.412742; --------aymCGCCCcy--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.043 14.1167 57.0189 0.0225276 8.58113 0.0225276 0.0225276 0.0225276 21.794 10.9058 0 0 0 c 0 0 0 0 0 0 0 0 22.9857 37.4062 42.936 99.9324 0.0225276 99.9324 99.9324 99.9324 66.7367 35.9751 0 0 0 g 0 0 0 0 0 0 0 0 22.9857 14.1167 0.0225276 0.0225276 91.3738 0.0225276 0.0225276 0.0225276 2.03687 10.9058 0 0 0 t 0 0 0 0 0 0 0 0 22.9857 34.3604 0.0225276 0.0225276 0.0225276 0.0225276 0.0225276 0.0225276 9.43238 42.2132 0 0 0

M08932_2.00_shift0 (ZNF467)
; oligos_6nt_mkv4_m5 versus M08932_2.00 (ZNF467); m=101/105; ncol2=22; w=-11; offset=-11; strand=D; shift=0; score=0.409717; yyyyyyyyycyyyCyCCTCCC ; cor=; Ncor= a 6.61323 4.60922 3.80762 2.60521 4.20842 6.61323 6.81363 3.80762 5.21042 3.40681 4.40882 4.60922 7.01403 2.40481 1.40281 2.00401 1.60321 2.20441 0.400802 0.801603 4.80962 c 54.1082 51.503 57.515 63.3267 64.1283 52.9058 57.9158 62.1242 53.507 64.5291 59.1182 42.0842 40.8818 73.3467 67.1343 92.986 79.1583 0.400802 97.5952 91.5832 84.9699 g 10.4208 8.41683 6.21242 8.01603 6.61323 4.80962 6.21242 5.61122 5.21042 7.61523 7.21443 12.2244 10.4208 6.41283 1.60321 1.80361 0.801603 2.40481 1.80361 2.20441 0.400802 t 28.8577 35.4709 32.4649 26.0521 25.0501 35.6713 29.0581 28.4569 36.0721 24.4489 29.2585 41.0822 41.6834 17.8357 29.8597 3.20641 18.4369 94.99 0.200401 5.41082 9.81964

M01862_2.00_shift9 (M01862_2.00)
; oligos_6nt_mkv4_m5 versus M01862_2.00; m=102/105; ncol2=9; w=-2; offset=-2; strand=D; shift=9; score=0.409035; ---------hmCGCCCmy--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 26.7384 42.0657 0.00439598 0.00439598 0.00439598 0.00439598 0.00439598 40.0281 6.56255 0 0 0 c 0 0 0 0 0 0 0 0 0 26.8904 57.9255 99.9868 0.00439598 99.9868 99.9868 99.9868 59.9631 55.5822 0 0 0 g 0 0 0 0 0 0 0 0 0 18.4418 0.00439598 0.00439598 99.9868 0.00439598 0.00439598 0.00439598 0.00439598 6.56255 0 0 0 t 0 0 0 0 0 0 0 0 0 27.9294 0 0 0 0 0 0 0 31.2927 0 0 0

M07614_2.00_shift6 (ZNF180)
; oligos_6nt_mkv4_m5 versus M07614_2.00 (ZNF180); m=103/105; ncol2=21; w=-5; offset=-5; strand=D; shift=6; score=0.408419; ------CCsCasbCcCCdCCc ; cor=; Ncor= a 0 0 0 0 0 0 0.182482 0.182482 10.4015 2.37226 49.0876 8.21168 7.48175 0.182482 3.10219 3.10219 0.182482 27.1898 0.912409 2.37226 14.781 c 0 0 0 0 0 0 92.8832 85.5839 57.1168 76.8248 19.8905 45.438 27.9197 99.4526 66.6058 73.9051 91.4234 11.1314 92.1533 70.9854 57.1168 g 0 0 0 0 0 0 6.75182 5.29197 28.6496 9.67153 21.3504 46.1679 25.7299 0.182482 16.9708 16.2409 0.182482 36.6788 5.29197 9.67153 11.1314 t 0 0 0 0 0 0 0.182482 8.94161 3.83212 11.1314 9.67153 0.182482 38.8686 0.182482 13.3212 6.75182 8.21168 25 1.64234 16.9708 16.9708

M08988_2.00_shift1 (M08988_2.00)
; oligos_6nt_mkv4_m5 versus M08988_2.00; m=104/105; ncol2=22; w=-10; offset=-10; strand=D; shift=1; score=0.400662; -yyyyyyycyCycYyCCtCCy ; cor=; Ncor= a 0 6.6 10.8 7.6 12.2 8 5.8 4.4 4.2 5.8 8.8 21.6 2.8 4 3.4 1.4 3 23.8 1 3.4 1.2 c 0 56.2 43 44.6 55.6 45.6 57 51.2 64.8 55.4 69.8 33.2 65.6 68 66.6 85.2 90.6 2.6 82.6 86.6 67.4 g 0 9.8 10.6 20.4 6.2 13.4 7.2 7.8 12 5.4 4 13.4 20.2 0.8 3.4 2 1 8.8 11.2 1.8 1.2 t 0 27.4 35.6 27.4 26 33 30 36.6 19 33.4 17.4 31.8 11.4 27.2 26.6 11.4 5.4 64.8 5.2 8.2 30.2

M08870_2.00_shift1 (MAZ)
; oligos_6nt_mkv4_m5 versus M08870_2.00 (MAZ); m=105/105; ncol2=22; w=-10; offset=-10; strand=D; shift=1; score=0.400662; -yyyyyyycyCycYyCCtCCy ; cor=; Ncor= a 0 6.6 10.8 7.6 12.2 8 5.8 4.4 4.2 5.8 8.8 21.6 2.8 4 3.4 1.4 3 23.8 1 3.4 1.2 c 0 56.2 43 44.6 55.6 45.6 57 51.2 64.8 55.4 69.8 33.2 65.6 68 66.6 85.2 90.6 2.6 82.6 86.6 67.4 g 0 9.8 10.6 20.4 6.2 13.4 7.2 7.8 12 5.4 4 13.4 20.2 0.8 3.4 2 1 8.8 11.2 1.8 1.2 t 0 27.4 35.6 27.4 26 33 30 36.6 19 33.4 17.4 31.8 11.4 27.2 26.6 11.4 5.4 64.8 5.2 8.2 30.2

One-to-n matrix alignment; reference matrix: positions_7nt_m1_shift8 ; 162 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
positions_7nt_m1_shift8 (positions_7nt_m1)
; positions_7nt_m1; m=0 (reference); ncol1=11; shift=8; ncol=19; --------csCTCCCACvc ; Alignment reference a 0 0 0 0 0 0 0 0 3186 4037 528 1482 502 1740 236 16263 90 4698 2303 c 0 0 0 0 0 0 0 0 6794 6009 16306 425 16085 15005 16331 127 17216 4929 7798 g 0 0 0 0 0 0 0 0 4315 4773 591 1226 889 565 639 1327 240 5070 4335 t 0 0 0 0 0 0 0 0 3551 3027 421 14713 370 536 640 129 300 3149 3410

M09515_2.00_shift8 (M09515_2.00)
; positions_7nt_m1 versus M09515_2.00; m=1/161; ncol2=12; w=0; offset=0; strand=D; shift=8; score=0.802639; --------cmCrCCCACrc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.4 32.9 1.4 25.3 0.1 0.1 0.1 86.1 0.1 25.5 2.6 c 0 0 0 0 0 0 0 0 35.7 51.3 95.3 0.1 99.7 99.7 94.3 13.7 99.7 3.5 67.8 g 0 0 0 0 0 0 0 0 19.2 6.6 0.1 58.7 0.1 0.1 0.1 0.1 0.1 55.2 18.2 t 0 0 0 0 0 0 0 0 24.8 9.2 3.2 15.9 0.1 0.1 5.5 0.1 0.1 15.8 11.4

M00776_2.00_shift9 (M00776_2.00)
; positions_7nt_m1 versus M00776_2.00; m=2/161; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.764753; ---------mcgCCCmCgy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 28.0343 15.9193 23.9553 8.00057 1.93417 3.06438 62.2598 2.16924 21.9875 14.4571 c 0 0 0 0 0 0 0 0 0 40.1824 56.1223 8.72499 89.078 91.8062 79.0315 27.6968 92.2383 7.03203 46.117 g 0 0 0 0 0 0 0 0 0 12.2243 9.27695 49.2146 0.00744296 5.58274 1.29673 5.37263 2.25777 55.1731 13.3455 t 0 0 0 0 0 0 0 0 0 19.5589 18.6815 18.1051 2.91396 0.67684 16.6074 4.67074 3.33468 15.8074 26.0804

M08107_2.00_rc_shift8 (E2F6_rc)
; positions_7nt_m1 versus M08107_2.00_rc (E2F6_rc); m=3/161; ncol2=11; w=0; offset=0; strand=R; shift=8; score=0.737457; --------byyTCCCGCCy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 13.4567 6.52884 0 0 0 0 0 4.75154 0 0 16.6485 c 0 0 0 0 0 0 0 0 32.9706 41.1679 38.8466 0 98.2227 100 99.7461 0 100 69.2419 50.9975 g 0 0 0 0 0 0 0 0 25.6075 16.4672 0 0 1.05187 0 0 70.8741 0 14.7262 2.9017 t 0 0 0 0 0 0 0 0 27.9652 35.8361 61.1534 100 0.725426 0 0.253899 24.3743 0 16.0319 29.4523

M04438_2.00_shift8 (EGR1)
; positions_7nt_m1 versus M04438_2.00 (EGR1); m=4/161; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.719254; --------cmCrCCCmCgc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.812 28.5357 7.63283 29.7004 2.48685 4.75973 4.16748 54.8634 0.170648 22.7166 8.27459 c 0 0 0 0 0 0 0 0 41.1735 47.1176 78.0531 7.48997 94.1416 90.0915 77.0299 32.5111 95.9776 13.8829 66.0792 g 0 0 0 0 0 0 0 0 16.2306 10.4727 2.55749 46.4378 0.908656 2.746 4.40227 6.24303 0 42.2063 8.17388 t 0 0 0 0 0 0 0 0 22.7838 13.8739 11.7565 16.3718 2.46294 2.40275 14.4003 6.38239 3.85178 21.1943 17.4723

M09021_2.00_shift8 (M09021_2.00)
; positions_7nt_m1 versus M09021_2.00; m=5/161; ncol2=11; w=0; offset=0; strand=D; shift=8; score=0.70042; --------ttTTCCCAsrs ; cor=; Ncor= a 0 0 0 0 0 0 0 0 14.4 10.8 2.8 0.6 0.4 10.4 3 89 9.6 27.2 21.4 c 0 0 0 0 0 0 0 0 23.2 19.8 6.4 12.2 96 75.8 95.6 3 41.4 21 35.4 g 0 0 0 0 0 0 0 0 21 19.6 0.4 1.2 2.6 0.4 1 2 39.6 45 33 t 0 0 0 0 0 0 0 0 41.4 49.8 90.4 86 1 13.4 0.4 6 9.4 6.8 10.2

M05849_2.00_shift9 (ZNF282)
; positions_7nt_m1 versus M05849_2.00 (ZNF282); m=6/161; ncol2=11; w=0; offset=1; strand=D; shift=9; score=0.697176; ---------cmTCCCaCAC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 18.8119 44.5545 9.901 8.9109 0 0 54.4554 0 69.3069 0 c 0 0 0 0 0 0 0 0 0 45.5446 41.5842 1.9802 90.099 100 99.0099 6.9307 96.0396 24.7525 100 g 0 0 0 0 0 0 0 0 0 10.8911 3.9604 4.9505 0.9901 0 0.9901 24.7525 3.9604 2.9703 0 t 0 0 0 0 0 0 0 0 0 24.7525 9.901 83.1683 0 0 0 13.8614 0 2.9703 0

M04439_2.00_shift8 (EGR2)
; positions_7nt_m1 versus M04439_2.00 (EGR2); m=7/161; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.695981; --------mmCrCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.001 40.4671 0.527831 25.1462 0 0.202327 1.18203 86.007 0 15.5957 0.790861 c 0 0 0 0 0 0 0 0 40.446 43.3121 94.6737 1.00715 99.7472 99.7977 77.7384 13.8187 99.8482 2.85199 86.6872 g 0 0 0 0 0 0 0 0 12.367 5.64756 1.53551 64.1001 0.252781 0 0.197006 0.174368 0 71.2274 1.53779 t 0 0 0 0 0 0 0 0 21.186 10.5732 3.26296 9.74659 0 0 20.8826 0 0.151822 10.3249 10.9842

M04440_2.00_shift8 (EGR2)
; positions_7nt_m1 versus M04440_2.00 (EGR2); m=8/161; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.695857; --------hmCGCCCACrC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.0908 42.3604 0.683956 12.222 0.346821 0.318011 0.110865 98.7931 0.0290782 27.4909 0.983757 c 0 0 0 0 0 0 0 0 30.7155 51.7798 97.9766 0.342215 99.3642 99.3929 95.2882 1.2069 99.9709 0.138145 78.6548 g 0 0 0 0 0 0 0 0 14.6015 1.80723 0.427472 84.0381 0.0289017 0 0.332594 0 0 59.368 6.17708 t 0 0 0 0 0 0 0 0 28.5922 4.05257 0.911941 3.3977 0.260116 0.289101 4.26829 0 0 13.0029 14.1844

M04437_2.00_shift8 (EGR1)
; positions_7nt_m1 versus M04437_2.00 (EGR1); m=9/161; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.694726; --------cmCrCCCmCgC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.713 33.137 9.66458 31.2385 1.54779 2.98439 5.56261 59.4771 0.032352 17.4956 7.29218 c 0 0 0 0 0 0 0 0 39.8983 41.6636 73.5642 8.67825 97.2874 93.3119 77.4321 33.5479 98.625 13.0649 74.9754 g 0 0 0 0 0 0 0 0 15.8413 12.5506 6.11728 48.8111 0.191479 1.72942 1.0414 4.23373 0.210288 60.1638 5.01722 t 0 0 0 0 0 0 0 0 19.5474 12.6488 10.654 11.2721 0.973352 1.97429 15.9639 2.7412 1.13232 9.27571 12.7152

M05860_2.00_shift7 (M05860_2.00)
; positions_7nt_m1 versus M05860_2.00; m=10/161; ncol2=13; w=-1; offset=-1; strand=D; shift=7; score=0.685625; -------cymCGCCCmCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 22.4 21 32.6 1 22.2 0.1 0.1 0.1 64.5 0.1 12.8 3.5 c 0 0 0 0 0 0 0 32.3 31.8 51.5 93.5 0.7 99.7 99.8 92.1 35.1 99.8 3.2 71.6 g 0 0 0 0 0 0 0 22.9 19.3 8.6 0.9 69.5 0.1 0.1 0.1 0.2 0.1 71 7.5 t 0 0 0 0 0 0 0 22.4 27.9 7.3 4.6 7.6 0.1 0.1 7.7 0.1 0.1 13.1 17.5

M00230_2.00_shift9 (EGR2)
; positions_7nt_m1 versus M00230_2.00 (EGR2); m=11/161; ncol2=10; w=0; offset=1; strand=D; shift=9; score=0.684366; ---------mcrCCCmccy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.4696 12.7214 30.8306 6.07116 0.756708 7.19322 39.7106 8.59421 16.1831 12.8811 c 0 0 0 0 0 0 0 0 0 37.5897 53.1588 7.45219 86.795 95.7003 69.626 41.7466 67.4299 63.6863 47.7397 g 0 0 0 0 0 0 0 0 0 12.5125 11.1706 43.7507 0.00921935 3.22593 2.41848 9.03963 6.49536 5.77749 10.1326 t 0 0 0 0 0 0 0 0 0 19.4283 22.9492 17.9665 7.12457 0.317024 20.7623 9.50311 17.4805 14.3531 29.2466

M08994_2.00_shift6 (M08994_2.00)
; positions_7nt_m1 versus M08994_2.00; m=12/161; ncol2=14; w=-2; offset=-2; strand=D; shift=6; score=0.680732; ------ccyCCrCCCMCrC ; cor=; Ncor= a 0 0 0 0 0 0 10.6 17.6 11 19 3.2 32 0 1 0.8 68.2 1.8 31.2 4.4 c 0 0 0 0 0 0 50 52.8 54.2 73 92.4 1.4 98 98.4 92.6 29.6 95 6.8 72.8 g 0 0 0 0 0 0 17 10.8 9.6 0.8 1.6 41.8 1.8 0.4 0.4 1.4 1.2 39.8 13.4 t 0 0 0 0 0 0 22.4 18.8 25.2 7.2 2.8 24.8 0.2 0.2 6.2 0.8 2 22.2 9.4

M08866_2.00_shift8 (SALL4)
; positions_7nt_m1 versus M08866_2.00 (SALL4); m=13/161; ncol2=10; w=0; offset=0; strand=D; shift=8; score=0.673636; --------CcCwCCChsc- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 4.4 22.6 0.4 58.6 1.4 1.2 1.4 29 13 16.8 0 c 0 0 0 0 0 0 0 0 81.4 66 98.8 1 80.4 98.2 97.2 34.4 47.8 51.4 0 g 0 0 0 0 0 0 0 0 2.4 1.6 0.2 3 16.2 0.4 0.2 0.6 25.8 13.8 0 t 0 0 0 0 0 0 0 0 11.8 9.8 0.6 37.4 2 0.2 1.2 36 13.4 18 0

M08979_2.00_shift8 (M08979_2.00)
; positions_7nt_m1 versus M08979_2.00; m=14/161; ncol2=10; w=0; offset=0; strand=D; shift=8; score=0.673636; --------CcCwCCChsc- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 4.4 22.6 0.4 58.6 1.4 1.2 1.4 29 13 16.8 0 c 0 0 0 0 0 0 0 0 81.4 66 98.8 1 80.4 98.2 97.2 34.4 47.8 51.4 0 g 0 0 0 0 0 0 0 0 2.4 1.6 0.2 3 16.2 0.4 0.2 0.6 25.8 13.8 0 t 0 0 0 0 0 0 0 0 11.8 9.8 0.6 37.4 2 0.2 1.2 36 13.4 18 0

M09038_2.00_rc_shift9 (M09038_2.00_rc)
; positions_7nt_m1 versus M09038_2.00_rc; m=15/161; ncol2=10; w=0; offset=1; strand=R; shift=9; score=0.670836; ---------syTCCCGCsc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 5.62249 0.200803 0.401606 0.200803 0.803213 0.401606 0.803213 1.60643 0.200803 13.0522 c 0 0 0 0 0 0 0 0 0 47.1888 47.1888 0.803213 92.1687 96.1847 94.5783 0 95.3815 61.8474 57.0281 g 0 0 0 0 0 0 0 0 0 26.3052 8.43373 0.401606 1.00402 2.61044 3.01205 91.7671 2.40964 25.7028 11.245 t 0 0 0 0 0 0 0 0 0 20.8835 44.1767 98.3936 6.62651 0.401606 2.00803 7.42972 0.60241 12.249 18.6747

M04462_2.00_shift8 (EGR4)
; positions_7nt_m1 versus M04462_2.00 (EGR4); m=16/161; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.670246; --------ymCGCCCMCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 18.605 38.9584 0.633624 9.8065 0 0.0572574 0 72.8326 0 16.0613 1.10299 c 0 0 0 0 0 0 0 0 42.2801 56.974 98.2963 0.322504 99.7999 99.9284 95.7088 25.7694 99.9857 1.82149 89.5344 g 0 0 0 0 0 0 0 0 10.169 1.09935 0 83.3851 0.0428878 0 0.205648 1.14763 0.0143225 74.7991 2.70617 t 0 0 0 0 0 0 0 0 28.9459 2.96826 1.07012 6.48591 0.157255 0.0143143 4.08555 0.250391 0 7.31812 6.65641

M06073_2.00_shift7 (M06073_2.00)
; positions_7nt_m1 versus M06073_2.00; m=17/161; ncol2=14; w=-1; offset=-1; strand=D; shift=7; score=0.669065; -------mcmCrCCCmCrc ; cor=; Ncor= a 0 0 0 0 0 0 0 27.4252 23.9949 36.4842 8.51155 32.763 1.62532 0 1.66809 67.408 0.342173 30.8811 15.6544 c 0 0 0 0 0 0 0 32.4569 37.3824 47.6476 81.9076 3.89222 98.3747 100 83.2763 29.8118 99.6578 13.6869 59.0248 g 0 0 0 0 0 0 0 20.8976 15.0128 6.97177 3.84944 51.0693 0 0 0 0.25663 0 46.1078 9.83747 t 0 0 0 0 0 0 0 19.2203 23.6099 8.89649 5.73139 12.2754 0 0 15.0556 2.52352 0 9.32421 15.4833

M04584_2.00_shift8 (EGR3)
; positions_7nt_m1 versus M04584_2.00 (EGR3); m=18/161; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.668903; --------hmCGCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 29.6397 41.0368 0 1.7082 0.269654 0.041632 0.100806 97.2458 0.207727 18.6845 0.38088 c 0 0 0 0 0 0 0 0 30.5978 58.1371 99.6472 0.542605 99.6059 99.9584 96.8145 2.7339 99.7507 0.832974 91.4492 g 0 0 0 0 0 0 0 0 13.5597 0.0413052 0.124507 96.5032 0.0829703 0 0.120968 0.0202511 0.0415455 68.9645 3.10417 t 0 0 0 0 0 0 0 0 26.2029 0.7848 0.228263 1.24598 0.0414852 0 2.96371 0 0 11.518 5.0657

M08358_2.00_shift8 (ZNF467)
; positions_7nt_m1 versus M08358_2.00 (ZNF467); m=19/161; ncol2=12; w=0; offset=0; strand=D; shift=8; score=0.66713; --------CCCTCCCCCyC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1.11257 0.850785 0.065445 0.065445 0.065445 1.37435 0.065445 0.065445 1.37435 18.6518 2.94503 c 0 0 0 0 0 0 0 0 74.411 87.7618 99.8037 0.065445 85.6675 93.5209 89.3325 84.3586 73.6257 34.8822 79.6466 g 0 0 0 0 0 0 0 0 4.25393 0.065445 0.065445 0.850785 3.46859 0.065445 1.11257 0.065445 1.63613 10.2749 5.03927 t 0 0 0 0 0 0 0 0 20.2225 11.322 0.065445 99.0183 10.7984 5.03927 9.48953 15.5105 23.3639 36.1911 12.3691

M00133_2.00_shift8 (M00133_2.00)
; positions_7nt_m1 versus M00133_2.00; m=20/161; ncol2=10; w=0; offset=0; strand=D; shift=8; score=0.657395; --------cmCgCCCmcy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.0214 42.3407 2.97602 15.6909 0.0767376 0.0263797 0.0433909 29.6789 10.202 20.7575 0 c 0 0 0 0 0 0 0 0 45.8577 50.1866 90.9753 1.40928 98.7545 99.967 83.3039 56.2855 54.1945 29.7523 0 g 0 0 0 0 0 0 0 0 11.8882 2.87413 2.48578 66.892 0.00389772 0.00304224 0.00127157 1.35045 11.9721 14.923 0 t 0 0 0 0 0 0 0 0 21.2327 4.59858 3.56295 16.0079 1.1649 0 16.6514 12.6852 23.6315 34.5672 0

M09020_2.00_shift9 (RBPJ)
; positions_7nt_m1 versus M09020_2.00 (RBPJ); m=21/161; ncol2=11; w=0; offset=1; strand=D; shift=9; score=0.656178; ---------kTTCCCAsgs ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 4.6 1.2 0.2 0.2 5.2 2 72.2 2 25 18.6 c 0 0 0 0 0 0 0 0 0 22.2 21.2 0.8 94 73 95.8 2.6 60.2 21.2 48 g 0 0 0 0 0 0 0 0 0 31.6 1.8 0.6 0.4 0.8 0.2 9 31.4 48.6 29.6 t 0 0 0 0 0 0 0 0 0 41.6 75.8 98.4 5.4 21 2 16.2 6.4 5.2 3.8

M09519_2.00_shift8 (RBPJL)
; positions_7nt_m1 versus M09519_2.00 (RBPJL); m=22/161; ncol2=10; w=0; offset=0; strand=D; shift=8; score=0.650401; --------ytTTCCCAsr- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.9 16 0.1 0.6 0.1 6.2 0.1 99.2 5.1 25.9 0 c 0 0 0 0 0 0 0 0 28.8 10.5 6 0.1 99.7 80 99.7 0.1 46.2 10.7 0 g 0 0 0 0 0 0 0 0 15.5 23.5 0.1 0.1 0.1 0.1 0.1 0.1 32.3 61.1 0 t 0 0 0 0 0 0 0 0 34.9 50 93.8 99.2 0.1 13.7 0.1 0.6 16.4 2.3 0

M08302_2.00_shift10 (EGR2)
; positions_7nt_m1 versus M08302_2.00 (EGR2); m=23/161; ncol2=9; w=0; offset=2; strand=D; shift=10; score=0.649964; ----------CgCCCmCdC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0739645 23.1509 0.0739645 0.0739645 0.0739645 37.9438 0.0739645 28.4763 0.0739645 c 0 0 0 0 0 0 0 0 0 0 99.7781 0.0739645 99.7781 99.7781 84.0976 61.9083 99.7781 0.0739645 89.1272 g 0 0 0 0 0 0 0 0 0 0 0.0739645 55.6953 0.0739645 0.0739645 0.0739645 0.0739645 0.0739645 45.932 10.7249 t 0 0 0 0 0 0 0 0 0 0 0.0739645 21.0799 0.0739645 0.0739645 15.7544 0.0739645 0.0739645 25.5178 0.0739645

M00249_2.00_shift9 (WT1)
; positions_7nt_m1 versus M00249_2.00 (WT1); m=24/161; ncol2=11; w=0; offset=1; strand=D; shift=9; score=0.648898; ---------mCyCCCCCrc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.7654 9.76681 2.48942 0.022935 0.022935 0.022935 9.70563 0.022935 25.8716 15.2561 c 0 0 0 0 0 0 0 0 0 29.4673 70.6996 32.473 99.9312 99.9312 99.9312 90.2485 99.9312 15.4144 54.2316 g 0 0 0 0 0 0 0 0 0 19.8837 9.76681 2.48942 0.022935 0.022935 0.022935 0.022935 0.022935 53.5748 15.2561 t 0 0 0 0 0 0 0 0 0 19.8837 9.76681 62.5481 0.022935 0.022935 0.022935 0.022935 0.022935 5.13927 15.2561

M09523_2.00_rc_shift8 (E2F6_rc)
; positions_7nt_m1 versus M09523_2.00_rc (E2F6_rc); m=25/161; ncol2=10; w=0; offset=0; strand=R; shift=8; score=0.648357; --------syyTCCCGCb- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.3 16.4 7.5 0.1 2.6 11.1 2.9 10.4 0.4 5.1 0 c 0 0 0 0 0 0 0 0 30 28.9 26.2 5 86.7 76.8 81.9 2.7 92.2 43.4 0 g 0 0 0 0 0 0 0 0 25.7 17.5 4.6 1.2 6.3 6.1 14.2 73.2 4 26.2 0 t 0 0 0 0 0 0 0 0 20 37.2 61.7 93.7 4.4 6 1 13.7 3.4 25.4 0

M04461_2.00_shift8 (EGR4)
; positions_7nt_m1 versus M04461_2.00 (EGR4); m=26/161; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.647176; --------cmCGCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.0333 44.0628 0.720243 5.48356 0 0 0.120126 83.4085 0.154172 3.15973 0.132363 c 0 0 0 0 0 0 0 0 45.2245 51.0423 98.1425 0.343824 99.9614 99.8169 95.694 16.2371 99.788 0.597042 97.9106 g 0 0 0 0 0 0 0 0 8.91357 1.65304 0.15163 91.2986 0 0.115663 0.0646831 0.209407 0.0192715 95.1226 0.264725 t 0 0 0 0 0 0 0 0 24.8286 3.2418 0.985595 2.87402 0.03861 0.0674699 4.12123 0.144974 0.0385431 1.1206 1.69235

M09506_2.00_shift10 (EGR1)
; positions_7nt_m1 versus M09506_2.00 (EGR1); m=27/161; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.644043; ----------CrCCCMCrC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 2.4 42.2 0.1 2.4 0.1 71.6 0.1 30 0.4 c 0 0 0 0 0 0 0 0 0 0 94 1 99.7 97.3 97.1 28.2 99.7 2.3 88.2 g 0 0 0 0 0 0 0 0 0 0 0.2 41.5 0.1 0.2 0.1 0.1 0.1 52.3 3.6 t 0 0 0 0 0 0 0 0 0 0 3.4 15.3 0.1 0.1 2.7 0.1 0.1 15.4 7.8

M04583_2.00_shift8 (EGR3)
; positions_7nt_m1 versus M04583_2.00 (EGR3); m=28/161; ncol2=13; w=0; offset=0; strand=D; shift=8; score=0.642432; --------mmCGCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.6547 52.8347 0.0796766 5.49078 0.0943341 0.170885 0.075841 92.8765 0.208989 4.05723 0.12021 c 0 0 0 0 0 0 0 0 37.4878 45.5584 99.9203 0.319454 99.8172 99.7614 82.8379 7.107 99.6674 0.331428 96.9118 g 0 0 0 0 0 0 0 0 11.9702 0.168541 0 92.4505 0.0619067 0.0530332 0.0171254 0 0.0677008 93.5178 0 t 0 0 0 0 0 0 0 0 23.8873 1.43841 0 1.73925 0.0265315 0.0147314 17.0691 0.0164577 0.0559268 2.09352 2.96803

M00739_2.00_shift8 (RBPJ)
; positions_7nt_m1 versus M00739_2.00 (RBPJ); m=29/161; ncol2=9; w=0; offset=0; strand=D; shift=8; score=0.642332; --------dktTCcCAy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.4047 22.6738 11.6858 6.3669 2.37326 17.6512 0.642074 77.5488 13.8208 0 0 c 0 0 0 0 0 0 0 0 20.7996 14.6027 19.2666 4.57732 91.3104 54.0983 96.2499 3.93892 39.495 0 0 g 0 0 0 0 0 0 0 0 28.6437 36.6425 13.9904 1.60178 1.34214 6.69127 1.25476 10.8147 20.2099 0 0 t 0 0 0 0 0 0 0 0 25.1519 26.081 55.0572 87.454 4.9742 21.5592 1.85326 7.69759 26.4743 0 0

M02885_2.00_shift9 (EGR2)
; positions_7nt_m1 versus M02885_2.00 (EGR2); m=30/161; ncol2=11; w=0; offset=1; strand=D; shift=9; score=0.640026; ---------mCGCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 55.8398 0 6.94444 0.370828 1.4944 0 93.9606 0 2.45883 0.232019 c 0 0 0 0 0 0 0 0 0 32.7703 93.8862 0 96.2917 96.7621 82.3331 4.814 98.4355 0 91.9374 g 0 0 0 0 0 0 0 0 0 4.53668 1.69492 87.8296 1.54512 0.933998 2.13124 1.13786 0.125156 93.5746 1.16009 t 0 0 0 0 0 0 0 0 0 6.85328 4.41889 5.22599 1.79234 0.809465 15.5356 0.0875274 1.4393 3.9666 6.67053

M06072_2.00_shift7 (M06072_2.00)
; positions_7nt_m1 versus M06072_2.00; m=31/161; ncol2=14; w=-1; offset=-1; strand=D; shift=7; score=0.639652; -------hmmCGCCCmCvy ; cor=; Ncor= a 0 0 0 0 0 0 0 27.7778 26.3158 47.3684 10.5263 15.7895 0 0 0 57.8947 0 31.5789 10.5263 c 0 0 0 0 0 0 0 44.4444 47.3684 47.3684 84.2105 0 100 94.7368 100 36.8421 100 26.3158 52.6316 g 0 0 0 0 0 0 0 0 21.0526 5.26316 0 73.6842 0 5.26316 0 0 0 42.1053 5.26316 t 0 0 0 0 0 0 0 27.7778 5.26316 0 5.26316 10.5263 0 0 0 5.26316 0 0 31.5789

M08105_2.00_shift8 (RBPJ)
; positions_7nt_m1 versus M08105_2.00 (RBPJ); m=32/161; ncol2=10; w=0; offset=0; strand=D; shift=8; score=0.638418; --------ckTTCCCAsv- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 22.7727 17.194 0.166528 1.20733 3.24729 2.49792 0.041632 99.3339 10.5745 25.4371 0 c 0 0 0 0 0 0 0 0 29.6003 24.6461 0.041632 0.166528 96.1282 96.2948 97.4604 0.0832639 32.7644 25.1457 0 g 0 0 0 0 0 0 0 0 24.1049 27.2689 0.62448 0 0.333056 0.832639 1.0408 0.499584 36.3031 35.0541 0 t 0 0 0 0 0 0 0 0 23.5221 30.8909 99.1674 98.6261 0.291424 0.374688 1.45712 0.0832639 20.358 14.363 0

M00742_2.00_shift8 (RBPJ)
; positions_7nt_m1 versus M00742_2.00 (RBPJ); m=33/161; ncol2=9; w=0; offset=0; strand=D; shift=8; score=0.637102; --------kktTCcCAc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.6818 23.2579 10.411 3.85203 1.36635 15.4282 0.216107 86.4987 10.8203 0 0 c 0 0 0 0 0 0 0 0 22.333 12.1417 14.9225 3.24982 94.8351 56.0475 98.2993 1.99397 45.6693 0 0 g 0 0 0 0 0 0 0 0 27.5517 36.4757 10.411 0.269442 0.601782 5.50799 0.581593 7.24368 18.9428 0 0 t 0 0 0 0 0 0 0 0 25.4335 28.1247 64.2555 92.6287 3.19677 23.0162 0.903044 4.26367 24.5675 0 0

M09034_2.00_rc_shift7 (E2F6_rc)
; positions_7nt_m1 versus M09034_2.00_rc (E2F6_rc); m=34/161; ncol2=13; w=-1; offset=-1; strand=R; shift=7; score=0.624955; -------yyyyTCCCGCCy ; cor=; Ncor= a 0 0 0 0 0 0 0 13.6 12.6 7 1.6 1.2 1.2 3.2 4.8 6.6 1 2 14.8 c 0 0 0 0 0 0 0 42.6 37.8 43.8 43.6 1.4 87.2 89.6 89.4 1.2 96.4 70 55.6 g 0 0 0 0 0 0 0 16.2 21.8 10.8 3.6 3.2 4.4 4.8 1.8 70.8 1.6 12.6 3.4 t 0 0 0 0 0 0 0 27.6 27.8 38.4 51.2 94.2 7.2 2.4 4 21.4 1 15.4 26.2

M00778_2.00_shift10 (M00778_2.00)
; positions_7nt_m1 versus M00778_2.00; m=35/161; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.620375; ----------cgCCCMCGc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 10.1428 18.7938 2.98506 0.0789937 0.779978 73.0394 0.052912 12.7618 6.82934 c 0 0 0 0 0 0 0 0 0 0 65.8094 3.20121 95.93 99.6449 91.9744 25.3049 99.5715 4.33385 62.2543 g 0 0 0 0 0 0 0 0 0 0 5.56648 63.6582 0.255028 0.23731 0.206286 0.836105 0.0424629 74.1771 8.0143 t 0 0 0 0 0 0 0 0 0 0 18.4814 14.3468 0.829957 0.0388368 7.03931 0.819549 0.333163 8.72729 22.9021

M00233_2.00_shift10 (EGR2)
; positions_7nt_m1 versus M00233_2.00 (EGR2); m=36/161; ncol2=10; w=0; offset=2; strand=D; shift=10; score=0.616161; ----------crCCCmCgy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 17.7414 25.6279 11.1401 0.99736 5.34589 49.217 2.94523 21.4637 12.4753 c 0 0 0 0 0 0 0 0 0 0 50.1942 8.11473 80.6845 95.3311 71.9757 40.2955 90.034 11.205 47.1698 g 0 0 0 0 0 0 0 0 0 0 11.6569 43.9776 2.18267 2.99623 2.26218 5.4534 1.9159 49.2231 14.2073 t 0 0 0 0 0 0 0 0 0 0 20.4075 22.2798 5.99273 0.675269 20.4162 5.03412 5.10483 18.1082 26.1475

M08349_2.00_shift10 (EGR3)
; positions_7nt_m1 versus M08349_2.00 (EGR3); m=37/161; ncol2=9; w=0; offset=2; strand=D; shift=10; score=0.615586; ----------CkCCYCCdC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0647668 21.8264 0.0647668 0.0647668 0.0647668 18.1995 0.0647668 29.5984 0.0647668 c 0 0 0 0 0 0 0 0 0 0 99.8057 0.0647668 99.8057 99.8057 73.6399 81.671 99.8057 0.0647668 75.7124 g 0 0 0 0 0 0 0 0 0 0 0.0647668 49.0285 0.0647668 0.0647668 0.0647668 0.0647668 0.0647668 40.2202 24.158 t 0 0 0 0 0 0 0 0 0 0 0.0647668 29.0803 0.0647668 0.0647668 26.2306 0.0647668 0.0647668 30.1166 0.0647668

M08996_2.00_shift7 (M08996_2.00)
; positions_7nt_m1 versus M08996_2.00; m=38/161; ncol2=14; w=-1; offset=-1; strand=D; shift=7; score=0.608989; -------cyCCgCCCmCgC ; cor=; Ncor= a 0 0 0 0 0 0 0 10.5691 10.3659 16.8699 0.406504 23.9837 0 0.609756 0 44.9187 1.01626 16.2602 1.42276 c 0 0 0 0 0 0 0 57.7236 54.878 77.8455 98.9837 0 100 98.9837 96.3415 54.4715 98.7805 1.21951 89.6341 g 0 0 0 0 0 0 0 9.7561 8.53659 2.84553 0.609756 61.1789 0 0.406504 0.203252 0.203252 0 67.0732 3.86179 t 0 0 0 0 0 0 0 21.9512 26.2195 2.43902 0 14.8374 0 0 3.45528 0.406504 0.203252 15.4472 5.0813

M07941_2.00_rc_shift9 (E2F6_rc)
; positions_7nt_m1 versus M07941_2.00_rc (E2F6_rc); m=39/161; ncol2=11; w=0; offset=1; strand=R; shift=9; score=0.608434; ---------yyTCCCGCcc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 8.59379 0 0 0.7812 0 0.3906 7.03121 0 0 19.1406 c 0 0 0 0 0 0 0 0 0 39.8438 35.5469 0 99.2188 100 99.6094 0 100 63.6719 51.5626 g 0 0 0 0 0 0 0 0 0 14.4531 0 0 0 0 0 84.7657 0 22.6562 7.03121 t 0 0 0 0 0 0 0 0 0 37.1094 64.4531 100 0 0 0 8.20311 0 13.6719 22.2656

M08939_2.00_shift9 (IKZF1)
; positions_7nt_m1 versus M08939_2.00 (IKZF1); m=40/161; ncol2=8; w=0; offset=1; strand=D; shift=9; score=0.608036; ---------yyTCCCAr-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 17.657 11.545 0 0 0 0 85.399 43.3786 0 0 c 0 0 0 0 0 0 0 0 0 36.8421 53.3107 14.9406 98.3022 95.0764 94.3973 0 23.7691 0 0 g 0 0 0 0 0 0 0 0 0 3.90492 3.05603 0 1.69779 3.05603 0 8.82852 28.6078 0 0 t 0 0 0 0 0 0 0 0 0 41.5959 32.0883 85.0594 0 1.86757 5.60272 5.7725 4.24448 0 0

M08969_2.00_shift9 (M08969_2.00)
; positions_7nt_m1 versus M08969_2.00; m=41/161; ncol2=8; w=0; offset=1; strand=D; shift=9; score=0.608036; ---------yyTCCCAr-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 17.657 11.545 0 0 0 0 85.399 43.3786 0 0 c 0 0 0 0 0 0 0 0 0 36.8421 53.3107 14.9406 98.3022 95.0764 94.3973 0 23.7691 0 0 g 0 0 0 0 0 0 0 0 0 3.90492 3.05603 0 1.69779 3.05603 0 8.82852 28.6078 0 0 t 0 0 0 0 0 0 0 0 0 41.5959 32.0883 85.0594 0 1.86757 5.60272 5.7725 4.24448 0 0

M10216_2.00_shift9 (EGR4)
; positions_7nt_m1 versus M10216_2.00 (EGR4); m=42/161; ncol2=12; w=0; offset=1; strand=D; shift=9; score=0.606664; ---------MCrCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 28 0 34 0 0 0 90.7 0 0 0 c 0 0 0 0 0 0 0 0 0 70 100 0 100 100 75.9 9.3 100 0 98.1 g 0 0 0 0 0 0 0 0 0 0 0 56.6 0 0 0 0 0 94.3 0 t 0 0 0 0 0 0 0 0 0 2 0 9.4 0 0 24.1 0 0 5.7 1.9

M00622_2.00_shift10 (M00622_2.00)
; positions_7nt_m1 versus M00622_2.00; m=43/161; ncol2=8; w=0; offset=2; strand=D; shift=10; score=0.605691; ----------CgCCCmCg- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 4.20133 13.3489 0.0302663 0.0302663 0.0302663 57.5363 0.0302663 16.6805 0 c 0 0 0 0 0 0 0 0 0 0 91.5557 23.3356 99.9092 99.9092 96.8826 33.3232 99.9092 8.36106 0 g 0 0 0 0 0 0 0 0 0 0 0.0415973 56.6245 0.0302663 0.0302663 0.0302663 9.11017 0.0302663 66.5973 0 t 0 0 0 0 0 0 0 0 0 0 4.20133 6.69108 0.0302663 0.0302663 3.0569 0.0302663 0.0302663 8.36106 0

M07940_2.00_rc_shift9 (E2F6_rc)
; positions_7nt_m1 versus M07940_2.00_rc (E2F6_rc); m=44/161; ncol2=11; w=0; offset=1; strand=R; shift=9; score= 0.6048; ---------yyTCCCGCcc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 3.8314 0 0 0 0 0 4.2146 0 0 15.7088 c 0 0 0 0 0 0 0 0 0 36.7816 37.1648 0 100 100 90.0383 0 100 62.0689 47.5096 g 0 0 0 0 0 0 0 0 0 18.3908 2.2989 0 0 0 0 83.1417 0 20.6897 12.2605 t 0 0 0 0 0 0 0 0 0 40.9962 60.5363 100 0 0 9.9617 12.6437 0 17.2414 24.5211

M10415_2.00_shift7 (M10415_2.00)
; positions_7nt_m1 versus M10415_2.00; m=45/161; ncol2=13; w=-1; offset=-1; strand=D; shift=7; score=0.600896; -------mGkTTCYCACrv ; cor=; Ncor= a 0 0 0 0 0 0 0 30 10 0 0 0 0 0 0 100 0 60 30 c 0 0 0 0 0 0 0 40 10 0 0 0 100 70 100 0 100 0 30 g 0 0 0 0 0 0 0 20 70 50 0 0 0 0 0 0 0 40 30 t 0 0 0 0 0 0 0 10 10 50 100 100 0 30 0 0 0 0 10

M07939_2.00_rc_shift9 (E2F6_rc)
; positions_7nt_m1 versus M07939_2.00_rc (E2F6_rc); m=46/161; ncol2=11; w=0; offset=1; strand=R; shift=9; score=0.598291; ---------yyTCCCGCcy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 9.7902 0 0 0 0 1.3986 3.4965 0 0 15.3846 c 0 0 0 0 0 0 0 0 0 34.2657 33.2168 0 97.9021 100 98.6014 0 100 65.035 47.9021 g 0 0 0 0 0 0 0 0 0 20.6294 0 0 2.0979 0 0 82.5175 0 18.8811 8.3916 t 0 0 0 0 0 0 0 0 0 35.3147 66.7832 100 0 0 0 13.986 0 16.0839 28.3217

M00735_2.00_shift7 (RBPJ)
; positions_7nt_m1 versus M00735_2.00 (RBPJ); m=47/161; ncol2=10; w=-1; offset=-1; strand=D; shift=7; score=0.594996; -------wrgtTCcCAy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 27.8506 25.5779 22.1091 12.4309 8.20288 3.09718 17.5109 0.295543 73.1076 14.7909 0 0 c 0 0 0 0 0 0 0 23.2627 21.5792 15.2715 20.4952 5.89724 89.1653 53.6683 93.79 4.76803 39.8058 0 0 g 0 0 0 0 0 0 0 22.1282 28.268 37.9394 15.6456 1.59119 1.31061 8.27156 2.72116 12.3287 19.767 0 0 t 0 0 0 0 0 0 0 26.7585 24.575 24.6799 51.4283 84.3087 6.4269 20.5492 3.19331 9.7956 25.6364 0 0

M00741_2.00_shift7 (RBPJ)
; positions_7nt_m1 versus M00741_2.00 (RBPJ); m=48/161; ncol2=10; w=-1; offset=-1; strand=D; shift=7; score=0.594625; -------wdgtTCcCAy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 28.3162 25.3065 21.1527 11.9841 7.61753 2.54559 17.0959 0.0667604 75.729 14.2366 0 0 c 0 0 0 0 0 0 0 23.1833 21.1378 15.8278 19.7584 5.20933 90.4106 55.0829 94.9504 4.46898 40.2783 0 0 g 0 0 0 0 0 0 0 21.8333 28.2491 38.9301 15.0831 1.5075 1.2641 7.7589 2.25546 11.3267 19.8026 0 0 t 0 0 0 0 0 0 0 26.6672 25.3065 24.0893 53.1744 85.6656 5.77975 20.0622 2.72741 8.47534 25.6826 0 0

M00737_2.00_shift7 (RBPJ)
; positions_7nt_m1 versus M00737_2.00 (RBPJ); m=49/161; ncol2=10; w=-1; offset=-1; strand=D; shift=7; score=0.59303; -------wdgtTCcCAy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 28.2141 25.496 22.4711 12.3771 7.58508 2.77954 16.9027 0.190065 75.4657 14.0786 0 0 c 0 0 0 0 0 0 0 23.5664 21.0842 14.7646 19.8032 4.74069 90.2231 55.0078 94.5958 4.27883 39.8314 0 0 g 0 0 0 0 0 0 0 21.1116 28.1775 38.1769 14.5246 1.51616 1.28696 7.44449 2.38599 11.2873 20.1793 0 0 t 0 0 0 0 0 0 0 27.1078 25.2423 24.5873 53.2951 86.1581 5.71038 20.645 2.82812 8.96814 25.9107 0 0

M00736_2.00_shift7 (RBPJ)
; positions_7nt_m1 versus M00736_2.00 (RBPJ); m=50/161; ncol2=10; w=-1; offset=-1; strand=D; shift=7; score=0.591135; -------wdktTCcCAc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 29.4154 26.4036 22.1158 11.8797 7.13126 1.69033 15.6352 0.148656 77.126 14.8806 0 0 c 0 0 0 0 0 0 0 22.0105 21.8347 14.1017 18.0804 5.66602 91.3706 56.2342 94.0548 4.50614 42.5236 0 0 g 0 0 0 0 0 0 0 21.1474 25.8808 35.3852 12.3645 1.19064 0.798455 7.02535 2.39618 10.8638 17.8153 0 0 t 0 0 0 0 0 0 0 27.4267 25.8808 28.3973 57.6754 86.0121 6.14061 21.1053 3.40035 7.50403 24.7805 0 0

M10188_2.00_shift9 (EGR1)
; positions_7nt_m1 versus M10188_2.00 (EGR1); m=51/161; ncol2=12; w=0; offset=1; strand=D; shift=9; score=0.588248; ---------mCGCCYACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 57.7 0 10.9 0 0 0 83.6837 0 1.8 0 c 0 0 0 0 0 0 0 0 0 42.3 100 0 100 100 69.1 14.5145 98.2 0 92.7 g 0 0 0 0 0 0 0 0 0 0 0 76.4 0 0 0 1.8018 0 98.2 0 t 0 0 0 0 0 0 0 0 0 0 0 12.7 0 0 30.9 0 1.8 0 7.3

M00740_2.00_shift7 (RBPJ)
; positions_7nt_m1 versus M00740_2.00 (RBPJ); m=52/161; ncol2=10; w=-1; offset=-1; strand=D; shift=7; score=0.585754; -------hrktTCcCAc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 25.2386 28.2624 16.951 10.9311 6.77878 4.75637 14.4817 3.90053 80.2786 16.0113 0 0 c 0 0 0 0 0 0 0 25.2386 14.9025 13.0701 20.118 5.22679 88.1892 58.1417 87.4541 2.1075 43.5232 0 0 g 0 0 0 0 0 0 0 14.4165 32.5095 43.3943 8.51316 0.305379 0.0992102 3.50042 0.221156 5.84451 15.852 0 0 t 0 0 0 0 0 0 0 35.1062 24.3256 26.5845 60.4377 87.6891 6.95517 23.8762 8.42424 11.7694 24.6135 0 0

M02883_2.00_shift8 (EGR1)
; positions_7nt_m1 versus M02883_2.00 (EGR1); m=53/161; ncol2=14; w=0; offset=0; strand=D; shift=8; score=0.585475; --------tmCGCCCmCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.9478 51.3906 0.322373 10.5203 0 0.260417 0 65.2638 0.325309 1.90616 1 c 0 0 0 0 0 0 0 0 24.1127 39.5405 96.9697 0.535578 98.0026 99.2839 92.8215 34.3593 99.5446 1.13636 93.8125 g 0 0 0 0 0 0 0 0 15.3967 3.62757 0.773694 85.4246 0.773196 0 0.93633 0 0 93.1818 1.1875 t 0 0 0 0 0 0 0 0 35.5428 5.44135 1.93424 3.51951 1.22423 0.455729 6.2422 0.376884 0.130124 3.77566 4

M10197_2.00_shift9 (EGR2)
; positions_7nt_m1 versus M10197_2.00 (EGR2); m=54/161; ncol2=12; w=0; offset=1; strand=D; shift=9; score=0.584671; ---------mCGCCyACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 49.95 1.2987 12.5 0 0 0 100 0 3.7962 0 c 0 0 0 0 0 0 0 0 0 44.8551 97.4026 0 100 100 62.5 0 100 0 96.2038 g 0 0 0 0 0 0 0 0 0 2.5974 0 82.5 0 0 0 0 0 89.9101 0 t 0 0 0 0 0 0 0 0 0 2.5974 1.2987 5 0 0 37.5 0 0 6.29371 3.7962

M03988_2.00_rc_shift10 (M03988_2.00_rc)
; positions_7nt_m1 versus M03988_2.00_rc; m=55/161; ncol2=9; w=0; offset=2; strand=R; shift=10; score=0.583477; ----------yTcaCACct ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 21.0809 3.2659 24.5332 65.0763 0 87.7288 2.10903 12.9809 14.9016 c 0 0 0 0 0 0 0 0 0 0 26.7832 18.4538 53.7942 13.5635 100 1.77793 89.9553 59.3934 24.4188 g 0 0 0 0 0 0 0 0 0 0 11.4842 5.54913 17.501 14.0419 0 10.4933 2.94906 10.3139 5.34472 t 0 0 0 0 0 0 0 0 0 0 40.6517 72.7312 4.17163 7.31833 0 0 4.9866 17.3118 55.3348

M08301_2.00_shift10 (GTF3A)
; positions_7nt_m1 versus M08301_2.00 (GTF3A); m=56/161; ncol2=9; w=0; offset=2; strand=D; shift=10; score=0.583159; ----------CTCCCATCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 1.8 2.6 0.2 0.2 1 85.8 0.2 0.2 0.2 c 0 0 0 0 0 0 0 0 0 0 89 0.2 93.8 96.2 97.8 1.8 1 96.2 95.4 g 0 0 0 0 0 0 0 0 0 0 5 0.2 4.2 0.2 0.2 0.2 0.2 0.2 0.2 t 0 0 0 0 0 0 0 0 0 0 4.2 97 1.8 3.4 1 12.2 98.6 3.4 4.2

M08398_2.00_shift5 (KLF14)
; positions_7nt_m1 versus M08398_2.00 (KLF14); m=57/161; ncol2=14; w=-3; offset=-3; strand=D; shift=5; score=0.58051; -----ggcCmCGCCCmCyy ; cor=; Ncor= a 0 0 0 0 0 22.5873 11.9097 9.2402 4.3121 37.7823 0 13.963 0 0 0 41.6838 2.6694 13.347 13.7577 c 0 0 0 0 0 13.7577 14.5791 60.9856 79.4661 61.3963 99.5893 0 100 100 92.4025 49.076 74.1273 45.9959 34.7023 g 0 0 0 0 0 57.2895 67.3511 7.3922 4.3121 0.8214 0 77.2074 0 0 0 0.8214 4.7228 8.0082 20.1232 t 0 0 0 0 0 6.3655 6.1602 22.3819 11.9097 0 0.4107 8.8296 0 0 7.5975 8.4189 18.4805 32.6489 31.4168

M00738_2.00_shift9 (RBPJ)
; positions_7nt_m1 versus M00738_2.00 (RBPJ); m=58/161; ncol2=8; w=0; offset=1; strand=D; shift=9; score=0.577447; ---------ktTCcCAy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 21.9174 11.9889 6.11805 2.53896 16.4263 0.893902 79.9384 12.6715 0 0 c 0 0 0 0 0 0 0 0 0 14.1156 18.9912 4.22595 91.997 55.6391 96.3359 3.71083 40.8276 0 0 g 0 0 0 0 0 0 0 0 0 37.9883 13.6532 1.31159 1.10711 6.41659 1.09181 9.78898 19.6752 0 0 t 0 0 0 0 0 0 0 0 0 25.9787 55.3667 88.3444 4.35688 21.5179 1.6784 6.56175 26.8257 0 0

M04511_2.00_shift6 (KLF15)
; positions_7nt_m1 versus M04511_2.00 (KLF15); m=59/161; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.574296; ------vccmCgCCCmcc- ; cor=; Ncor= a 0 0 0 0 0 0 29.0396 21.2916 15.9457 54.3609 0 19.6352 0.665188 3.79702 1.63279 36.4374 11.0315 17.5305 0 c 0 0 0 0 0 0 25.3811 52.9566 65.996 34.7006 96.8981 23.1277 96.9697 93.1157 87.4375 48.7021 64.9423 48.3232 0 g 0 0 0 0 0 0 34.4893 12.1695 5.5332 3.43899 0 50.9119 0.406504 2.37757 2.53249 4.34783 7.1985 12.5381 0 t 0 0 0 0 0 0 11.0899 13.5822 12.5252 7.49948 3.10192 6.32518 1.95861 0.709723 8.3972 10.5127 16.8277 21.6082 0

M10279_2.00_shift9 (EGR3)
; positions_7nt_m1 versus M10279_2.00 (EGR3); m=60/161; ncol2=12; w=0; offset=1; strand=D; shift=9; score=0.57384; ---------mCGCCyACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 64 0 5.69431 0 0 0 100 0 0 0 c 0 0 0 0 0 0 0 0 0 34 100 0 100 100 67.9 0 100 0 98.1 g 0 0 0 0 0 0 0 0 0 0 0 88.6114 0 0 0 0 0 100 0 t 0 0 0 0 0 0 0 0 0 2 0 5.69431 0 0 32.1 0 0 0 1.9

M02886_2.00_shift7 (EGR2)
; positions_7nt_m1 versus M02886_2.00 (EGR2); m=61/161; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.573152; -------yhmCGCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 24.8517 26.3117 48.7763 0.897729 9.80359 0.159943 0.284495 0.353833 87.7621 0 3.52679 0.339789 c 0 0 0 0 0 0 0 29.8259 28.5412 41.1833 97.3068 0.822562 99.2003 99.2176 84.92 11.2903 99.679 1.74628 91.2504 g 0 0 0 0 0 0 0 19.1314 13.4922 2.33186 0.457666 82.3737 0.390972 0.302276 0 0.584677 0.249643 90.6865 0.30581 t 0 0 0 0 0 0 0 26.1909 31.6548 7.70861 1.33779 7.00017 0.2488 0.19559 14.7262 0.362903 0.0713267 4.0404 8.10398

M02884_2.00_shift8 (EGR1)
; positions_7nt_m1 versus M02884_2.00 (EGR1); m=62/161; ncol2=14; w=0; offset=0; strand=D; shift=8; score=0.569645; --------wACGCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 27.2298 73.7508 0.672372 1.83443 0 0 0 79.544 0 0 0 c 0 0 0 0 0 0 0 0 23.0951 24.9209 98.7775 0 100 99.2159 97.9714 20 99.9394 0 99.2202 g 0 0 0 0 0 0 0 0 11.3999 0.189753 0.183374 98.1656 0 0 0 0.456026 0 99.9073 0 t 0 0 0 0 0 0 0 0 38.2753 1.13852 0.366748 0 0 0.784077 2.02864 0 0.0605694 0.0926784 0.779844

M04509_2.00_shift6 (ZNF281)
; positions_7nt_m1 versus M04509_2.00 (ZNF281); m=63/161; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.569133; ------gCCCCTCCCCCa- ; cor=; Ncor= a 0 0 0 0 0 0 11.2647 2.15385 4.33229 0.138504 6.92892 2.06233 0 1.67286 3.41696 3.75881 5.06993 67.5349 0 c 0 0 0 0 0 0 14.7892 92.2198 93.9705 98.2918 91.0148 0 99.8126 98.3271 91.263 81.9107 92.5699 23.0233 0 g 0 0 0 0 0 0 61.2647 0.835165 1.25056 0 0.49173 0 0.0937207 0 1.25433 5.91229 0 1.67442 0 t 0 0 0 0 0 0 12.6814 4.79121 0.446628 1.56971 1.5646 97.9377 0.0937207 0 4.06574 8.41817 2.36014 7.76744 0

M02898_2.00_shift6 (SP6,SP8)
; positions_7nt_m1 versus M02898_2.00 (SP6,SP8); m=64/161; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.565455; ------rmCACgCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 0 31.1377 31.5789 12.1951 78.6982 3.88889 9.32836 2.77778 1.16279 0 51.1364 5.41667 18.6747 0 c 0 0 0 0 0 0 16.1677 66.0819 81.4634 19.5266 92.7778 13.806 92.7778 97.093 89.7849 43.75 69.5833 31.3253 0 g 0 0 0 0 0 0 46.7066 0 0 0.591716 0.555556 62.3134 3.33333 1.74419 2.15054 3.40909 8.75 0.60241 0 t 0 0 0 0 0 0 5.98802 2.33918 6.34146 1.18343 2.77778 14.5522 1.11111 0 8.06452 1.70455 16.25 49.3976 0

M04504_2.00_shift5 (ZNF75A)
; positions_7nt_m1 versus M04504_2.00 (ZNF75A); m=65/161; ncol2=14; w=-3; offset=-3; strand=D; shift=5; score=0.564389; -----mGCTTTTCCCACac ; cor=; Ncor= a 0 0 0 0 0 31.3288 3.01455 12.4075 1.3903 0.125718 3.34246 0.0539084 0 4.51077 0.0179759 99.2849 0.0359648 48.8609 19.0099 c 0 0 0 0 0 40.8894 2.7324 70.8961 4.44218 0.125718 11.2088 0.125786 99.6055 94.1835 99.8382 0.232392 99.8741 20.2913 46.5887 g 0 0 0 0 0 11.4512 82.477 15.7391 0 0 5.43149 0.0179695 0.017934 0.101747 0.0359518 0.0893815 0.0899119 23.4782 14.8155 t 0 0 0 0 0 16.3306 11.7761 0.957365 94.1675 99.7486 80.0173 99.8023 0.376614 1.204 0.107855 0.393279 0 7.3696 19.586

M04503_2.00_shift5 (ZNF75A)
; positions_7nt_m1 versus M04503_2.00 (ZNF75A); m=66/161; ncol2=14; w=-3; offset=-3; strand=D; shift=5; score=0.563051; -----mGcTTTTCCCACam ; cor=; Ncor= a 0 0 0 0 0 32.8325 7.1123 21.5026 3.70852 0 6.18264 0.149925 0 10.6658 0.0750751 98.3013 0.299625 56.7691 26.2209 c 0 0 0 0 0 38.0165 7.86096 57.4698 7.93754 0.0750751 9.86954 0.0749625 98.5926 86.0375 99.9249 0.664697 99.7004 18.942 40.3456 g 0 0 0 0 0 13.9745 71.1765 18.3938 1.75667 0 8.4515 0 0 0.452489 0 0.516987 0 14.3914 14.3501 t 0 0 0 0 0 15.1766 13.8503 2.63385 86.5973 99.9249 75.4963 99.7751 1.40741 2.84421 0 0.516987 0 9.89761 19.0834

M09428_2.00_rc_shift9 (M09428_2.00_rc)
; positions_7nt_m1 versus M09428_2.00_rc; m=67/161; ncol2=12; w=0; offset=1; strand=R; shift=9; score=0.563022; ---------wytcwCACct ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 32 14 19.4 9.4 53.6 5.4 97.6 0.2 21.6 18 c 0 0 0 0 0 0 0 0 0 22.2 38.6 18 64.6 14.2 94.2 0 73.8 56.4 22.4 g 0 0 0 0 0 0 0 0 0 12.2 13.8 2 23 4.8 0.4 0.6 24.4 1.4 5.8 t 0 0 0 0 0 0 0 0 0 33.6 33.6 60.6 3 27.4 0 1.8 1.6 20.6 53.8

M04513_2.00_shift6 (KLF15)
; positions_7nt_m1 versus M04513_2.00 (KLF15); m=68/161; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.561059; ------rcCmCrCCCmcc- ; cor=; Ncor= a 0 0 0 0 0 0 28.524 19.4706 14.8438 61.7341 3.34436 26.8483 3.79323 5.3418 6.84564 33.1376 11.742 21.0788 0 c 0 0 0 0 0 0 15.5473 63.1813 75.3437 31.1753 88.6071 11.12 89.6616 90.0635 80.906 55.3028 67.6831 45.1452 0 g 0 0 0 0 0 0 49.5025 6.36792 2.3125 3.19846 1.94781 48.307 1.3016 2.24131 4.83221 2.89908 3.75044 9.50207 0 t 0 0 0 0 0 0 6.4262 10.9801 7.5 3.8921 6.1007 13.7247 5.24358 2.35338 7.41611 8.66055 16.8244 24.2739 0

M06118_2.00_shift5 (SP6)
; positions_7nt_m1 versus M06118_2.00 (SP6); m=69/161; ncol2=14; w=-3; offset=-3; strand=D; shift=5; score=0.560483; -----ggycmCGCCCmcyy ; cor=; Ncor= a 0 0 0 0 0 18.1996 12.1429 16.1458 15.9722 51.0417 2.60417 6.77083 1.21528 1.73611 1.5625 47.0486 10.2431 13.1944 13.0742 c 0 0 0 0 0 17.4168 5.35714 45.1389 58.8542 48.7847 96.875 0 98.7847 97.7431 85.7639 41.1458 61.8056 31.25 30.9187 g 0 0 0 0 0 45.4012 65.8929 11.4583 2.77778 0.173611 0 88.5417 0 0 0 0.347222 5.72917 12.8472 24.735 t 0 0 0 0 0 18.9824 16.6071 27.2569 22.3958 0 0.520833 4.6875 0 0.520833 12.6736 11.4583 22.2222 42.7083 31.2721

M04510_2.00_shift6 (ZNF281)
; positions_7nt_m1 versus M04510_2.00 (ZNF281); m=70/161; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.559231; ------rCCCmTCCCCCr- ; cor=; Ncor= a 0 0 0 0 0 0 26.988 15.4793 12.0417 1.77179 33.1018 15.3637 4.31528 5.19077 15.1746 16.4008 6.88917 27.1103 0 c 0 0 0 0 0 0 6.55738 70.9328 80.4375 96.1729 59.0519 0.0777907 89.432 89.8181 71.7682 69.4927 86.564 11.3775 0 g 0 0 0 0 0 0 58.4781 7.34484 3.875 1.25207 4.72007 6.06768 3.941 3.54925 7.16939 6.30937 2.48181 49.3761 0 t 0 0 0 0 0 0 7.97651 6.24311 3.64583 0.803213 3.12628 78.4909 2.31176 1.44188 5.88782 7.7971 4.06504 12.136 0

M04564_2.00_shift7 (GLIS1)
; positions_7nt_m1 versus M04564_2.00 (GLIS1); m=71/161; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.553593; -------baCCCCCCACga ; cor=; Ncor= a 0 0 0 0 0 0 0 8.64726 64.9057 1.57025 0.929054 12.754 0.0845309 15.7698 0.417711 72.7513 1.62338 23.3573 49.3628 c 0 0 0 0 0 0 0 33.6473 22.327 96.0331 98.7331 74.1416 98.9011 83.8565 96.7419 2.51323 93.75 15.7372 8.71898 g 0 0 0 0 0 0 0 27.7397 11.8868 0 0.337838 0.280308 0.507185 0.373692 0.417711 23.4788 3.00325 52.0707 17.505 t 0 0 0 0 0 0 0 29.9658 0.880503 2.39669 0 12.8241 0.507185 0 2.42272 1.25661 1.62338 8.8349 24.4131

M02875_2.00_shift7 (GLI2)
; positions_7nt_m1 versus M02875_2.00 (GLI2); m=72/161; ncol2=14; w=-1; offset=-1; strand=D; shift=7; score=0.551224; -------GACCACmCAcrw ; cor=; Ncor= a 0 0 0 0 0 0 0 4.47409 68.7854 3.92073 0.223589 76.566 0.302691 32.2469 8.49486 81.2861 18.9785 30.9972 34.6293 c 0 0 0 0 0 0 0 4.66467 19.1536 95.0616 99.2063 8.97325 99.4843 67.1483 79.2675 1.84117 54.6092 18.3324 14.4918 g 0 0 0 0 0 0 0 80.5336 11.9371 0.171398 0.279486 5.53926 0.190583 0.459229 1.58106 14.427 13.4708 41.4535 23.1913 t 0 0 0 0 0 0 0 10.3276 0.124021 0.846277 0.290665 8.92148 0.0224215 0.145609 10.6565 2.44573 12.9415 9.2169 27.6876

M00375_2.00_shift11 (M00375_2.00)
; positions_7nt_m1 versus M00375_2.00; m=73/161; ncol2=9; w=0; offset=3; strand=D; shift=11; score=0.549736; -----------gCCcmCgc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 24.3908 13.6334 2.50247 7.7362 48.4453 2.10408 20.8312 15.2373 c 0 0 0 0 0 0 0 0 0 0 0 12.7331 74.6286 84.5445 67.0817 40.4649 91.2753 12.1393 46.7 g 0 0 0 0 0 0 0 0 0 0 0 41.026 2.7802 9.1823 3.72814 5.15741 0.424807 48.7377 13.9258 t 0 0 0 0 0 0 0 0 0 0 0 21.8501 8.95779 3.77076 21.454 5.93243 6.19585 18.2918 24.1369

M04645_2.00_shift6 (SP6,SP9)
; positions_7nt_m1 versus M04645_2.00 (SP6,SP9); m=74/161; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.544723; ------rcCmCGCCCmcy- ; cor=; Ncor= a 0 0 0 0 0 0 34.0131 14.7242 10.1294 65.7105 0.0806777 6.95222 0.8846 0 1.33288 41.9423 6.64311 17.1359 0 c 0 0 0 0 0 0 17.9445 63.7617 77.343 30.2145 98.8705 6.58979 98.5525 98.7908 83.7662 44.2998 65.8304 47.6132 0 g 0 0 0 0 0 0 38.8254 8.0385 3.56579 1.50134 0.68576 80.7578 0 0 0.820232 1.33709 6.74912 8.32313 0 t 0 0 0 0 0 0 9.21697 13.4755 8.96182 2.57373 0.36305 5.70016 0.562927 1.20919 14.0807 12.4208 20.7774 26.9278 0

M00226_2.00_shift8 (KLF1)
; positions_7nt_m1 versus M00226_2.00 (KLF1); m=75/161; ncol2=8; w=0; offset=0; strand=D; shift=8; score=0.543552; --------CmCGCCCm--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 8.36106 40.6055 0.0302663 21.2167 0.0302663 0.0302663 0.0302663 52.1267 0 0 0 c 0 0 0 0 0 0 0 0 74.9168 59.3321 96.8826 3.0569 99.9092 99.9092 99.9092 30.4253 0 0 0 g 0 0 0 0 0 0 0 0 4.20133 0.031211 3.0569 75.6961 0.0302663 0.0302663 0.0302663 4.38368 0 0 0 t 0 0 0 0 0 0 0 0 12.5208 0.031211 0.0302663 0.0302663 0.0302663 0.0302663 0.0302663 13.0642 0 0 0

M02892_2.00_shift7 (ZNF740)
; positions_7nt_m1 versus M02892_2.00 (ZNF740); m=76/161; ncol2=10; w=-1; offset=-1; strand=D; shift=7; score=0.542133; -------cCCCCCCCAc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 19.8051 2.29439 1.13194 1.38249 5.04422 0.612944 0.899119 1.61807 72.652 7.5187 0 0 c 0 0 0 0 0 0 0 57.0798 95.976 96.1797 96.3843 89.0599 98.035 97.7882 91.6568 7.02739 67.8055 0 0 g 0 0 0 0 0 0 0 16.0537 0.352983 1.04351 1.08118 2.86603 0.757166 0.143859 1.1967 7.08083 3.35411 0 0 t 0 0 0 0 0 0 0 7.06142 1.37663 1.64485 1.15207 3.02981 0.594916 1.16885 5.5284 13.2398 21.3217 0 0

M02915_2.00_shift7 (EGR3)
; positions_7nt_m1 versus M02915_2.00 (EGR3); m=77/161; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.540067; -------yhmCGCCCMCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 19.4798 26.747 58.5131 0.106952 2.87958 0 0 0 71.1479 0 1.73719 0.104004 c 0 0 0 0 0 0 0 37.2832 29.2169 39.7843 99.1979 1.39616 99.8924 99.4647 95.445 27.9312 99.5223 1.24722 98.752 g 0 0 0 0 0 0 0 16.0694 11.506 0.567537 0 94.1536 0.107643 0 0.366492 0.675261 0.37155 95.8575 0.0520021 t 0 0 0 0 0 0 0 27.1676 32.5301 1.13507 0.695187 1.57068 0 0.535332 4.18848 0.245549 0.106157 1.15813 1.09204

M04517_2.00_shift6 (SP6,SP8)
; positions_7nt_m1 versus M04517_2.00 (SP6,SP8); m=78/161; ncol2=12; w=-2; offset=-2; strand=D; shift=6; score=0.540032; ------rcCMCGCCCmcy- ; cor=; Ncor= a 0 0 0 0 0 0 34.3794 20.4684 8.29254 69.9729 0.139373 7.67123 0.209278 0.209497 0.0941029 44.6849 7.16262 22.426 0 c 0 0 0 0 0 0 15.2327 57.7597 81.6585 27.8559 98.8153 2.86149 98.9187 99.0223 88.9586 44.2458 66.7384 38.3639 0 g 0 0 0 0 0 0 37.4824 9.47047 0.950187 0.542808 0.278746 86.3318 0 0.628492 1.12923 0.627156 5.68706 9.69676 0 t 0 0 0 0 0 0 12.9055 12.3014 9.09876 1.62842 0.766551 3.13546 0.871992 0.139665 9.81807 10.4421 20.4119 29.5134 0

M02931_2.00_shift8 (M02931_2.00)
; positions_7nt_m1 versus M02931_2.00; m=79/161; ncol2=15; w=0; offset=0; strand=D; shift=8; score=0.537626; --------wmCGCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.3199 65.7557 0 1.79558 0.0547945 0.435967 0.214362 79.5125 0 0.42333 0.162075 c 0 0 0 0 0 0 0 0 24.1051 32.348 99.1347 0.644567 99.6164 99.1281 95.1233 20.3134 99.7272 0.70555 98.9735 g 0 0 0 0 0 0 0 0 9.34004 0.725042 0.270416 96.639 0.109589 0.217984 0.267953 0 0.163666 97.9774 0 t 0 0 0 0 0 0 0 0 35.2349 1.17122 0.594916 0.92081 0.219178 0.217984 4.39443 0.174115 0.109111 0.893697 0.864398

M04416_2.00_shift6 (GLI3)
; positions_7nt_m1 versus M04416_2.00 (GLI3); m=80/161; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score=0.537331; ------vGACCACCCACgw ; cor=; Ncor= a 0 0 0 0 0 0 33.6885 0.864005 71.8195 0.351639 0.0362 85.419 0.0155167 21.6029 2.67409 92.6417 9.51303 19.0302 32.1687 c 0 0 0 0 0 0 28.7725 1.13248 16.4438 99.6122 99.9586 10.3861 99.9586 78.3841 95.6141 0 78.0147 22.2108 12.7418 g 0 0 0 0 0 0 28.0052 91.5454 11.7243 0.0361982 0.00517143 0.911312 0.0206889 0.00433445 0.0759686 7.35826 5.91845 52.1395 20.3961 t 0 0 0 0 0 0 9.53385 6.45807 0.0124198 0 0 3.28354 0 0 1.63586 0 6.55381 6.6194 34.6933

M02821_2.00_rc_shift11 (MGA_rc)
; positions_7nt_m1 versus M02821_2.00_rc (MGA_rc); m=81/161; ncol2=8; w=0; offset=3; strand=R; shift=11; score=0.535767; -----------TCACACCT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0.861825 16.4103 87.1089 0.0360478 89.3293 0.334212 4.76708 9.31211 c 0 0 0 0 0 0 0 0 0 0 0 2.89372 77.3911 1.08854 99.9148 0.281269 97.9787 75.3466 19.8621 g 0 0 0 0 0 0 0 0 0 0 0 0.345988 4.44969 8.82546 0.00327708 10.3542 1.63571 9.23514 2.5765 t 0 0 0 0 0 0 0 0 0 0 0 95.8985 1.74891 2.97706 0.0458791 0.0351587 0.0514172 10.6512 68.2493

M02889_2.00_shift7 (EGR4)
; positions_7nt_m1 versus M02889_2.00 (EGR4); m=82/161; ncol2=16; w=-1; offset=-1; strand=D; shift=7; score=0.534792; -------yymCGCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 20.9027 20.9149 55.1426 2.00556 6.32465 0.238663 2.52578 0 71.8162 0.915713 2.54896 0.20982 c 0 0 0 0 0 0 0 26.1329 30.4483 38.6501 88.6815 5.40325 96.4851 93.6224 94.8105 16.8369 91.6129 19.6149 91.3554 g 0 0 0 0 0 0 0 17.9832 9.64318 3.03335 2.97855 80.2298 1.36689 2.25216 2.36865 5.55378 2.37253 75.0684 3.8397 t 0 0 0 0 0 0 0 34.9812 38.9936 3.17397 6.33439 8.04232 1.90931 1.59966 2.82084 5.79317 5.09886 2.76775 4.59505

M04559_2.00_shift5 (SP3,SP6)
; positions_7nt_m1 versus M04559_2.00 (SP3,SP6); m=83/161; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.533269; -----sgCCMCGCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 18.12 23.453 11.418 5.5243 73.9408 0 14.5351 0 0 0.185874 48.8032 4.24892 21.0642 0 c 0 0 0 0 0 30.96 6.35643 77.1332 85.2344 25.9592 100 0 99.4628 100 84.4711 42.5361 75.2961 41.0082 0 g 0 0 0 0 0 26.08 60.8498 3.00879 1.15942 0.019984 0 70.9581 0.0198965 0 0 0.511602 1.74845 7.9816 0 t 0 0 0 0 0 24.84 9.34075 8.44006 8.08184 0.0799361 0 14.5067 0.51731 0 15.343 8.1491 18.7065 29.946 0

M00140_2.00_shift8 (M00140_2.00)
; positions_7nt_m1 versus M00140_2.00; m=84/161; ncol2=8; w=0; offset=0; strand=D; shift=8; score=0.533204; --------CYATCCCA--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.0397 0.124378 99.6681 0.110619 0.110619 0.110619 0.110619 99.5739 0 0 0 c 0 0 0 0 0 0 0 0 79.5635 74.7512 0.110619 0.110619 99.6681 99.6681 99.6681 0.142045 0 0 0 g 0 0 0 0 0 0 0 0 0.198413 0.124378 0.110619 0.110619 0.110619 0.110619 0.110619 0.142045 0 0 0 t 0 0 0 0 0 0 0 0 0.198413 25 0.110619 99.6681 0.110619 0.110619 0.110619 0.142045 0 0 0

M02732_2.00_shift7 (GLI2)
; positions_7nt_m1 versus M02732_2.00 (GLI2); m=85/161; ncol2=10; w=-1; offset=-1; strand=D; shift=7; score=0.531819; -------GACCACmCAc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 4.28623 75.8713 3.17259 0.656743 72.448 0.784998 33.4015 7.21724 82.9304 14.8782 0 0 c 0 0 0 0 0 0 0 3.45078 12.8351 95.7699 99.1243 15.616 98.7353 66.1601 81.2926 3.07692 53.0459 0 0 g 0 0 0 0 0 0 0 82.2376 11.193 0.126904 0.0437828 3.104 0.087222 0.263004 0.897666 11.6484 13.941 0 0 t 0 0 0 0 0 0 0 10.0254 0.100536 0.930626 0.175131 8.832 0.392499 0.175336 10.5925 2.34432 18.135 0 0

M04402_2.00_shift6 (GLI2)
; positions_7nt_m1 versus M04402_2.00 (GLI2); m=86/161; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score=0.530111; ------vGACCACCCACgw ; cor=; Ncor= a 0 0 0 0 0 0 31.8292 0.518013 75.2188 0 0 93.6208 0 18.04 1.00919 96.596 6.63369 15.3585 37.46 c 0 0 0 0 0 0 29.8042 1.2656 15.4002 99.9513 99.9939 4.00927 100 81.96 97.9937 0.0418035 84.9299 18.8341 8.90617 g 0 0 0 0 0 0 28.594 93.931 9.381 0 0 0.576146 0 0 0.0785593 3.21887 3.81423 60.5596 16.0065 t 0 0 0 0 0 0 9.77256 4.28538 0 0.0486766 0 1.79378 0 0 0.91854 0.143326 4.62215 5.24773 37.6273

M08882_2.00_shift6 (EGR1)
; positions_7nt_m1 versus M08882_2.00 (EGR1); m=87/161; ncol2=17; w=-2; offset=-2; strand=D; shift=6; score=0.529808; ------yyyCCrCCCmCgC ; cor=; Ncor= a 0 0 0 0 0 0 11.8 15 12.8 17.2 6 30 1.4 2.2 1.4 55.4 4 21.2 5 c 0 0 0 0 0 0 43.6 45.6 40.6 69.6 84.2 0.4 93 95.8 89.2 41 87 4.6 80.8 g 0 0 0 0 0 0 18.2 8.2 12.8 2.2 1 47.6 3.2 0.4 0.2 0.4 3.4 50.6 3 t 0 0 0 0 0 0 26.4 31.2 33.8 11 8.8 22 2.4 1.6 9.2 3.2 5.6 23.6 11.2

M02891_2.00_shift7 (ZNF740)
; positions_7nt_m1 versus M02891_2.00 (ZNF740); m=88/161; ncol2=10; w=-1; offset=-1; strand=D; shift=7; score=0.529277; -------mCCCCCCCAc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 27.3826 7.78087 6.20484 0.948509 0.902527 0.361991 2.33996 4.5264 68.0266 12.4568 0 0 c 0 0 0 0 0 0 0 46.2576 85.391 91.4152 97.1545 97.0668 97.3303 94.9669 90.1509 18.5642 61.8815 0 0 g 0 0 0 0 0 0 0 17.7592 1.07185 0.297493 0.361337 0.541516 0.950226 1.6777 0.963956 3.60531 5.29344 0 0 t 0 0 0 0 0 0 0 8.60065 5.75625 2.08245 1.53568 1.48917 1.35747 1.01545 4.35876 9.80392 20.3682 0 0

M02921_2.00_shift6 (SP1)
; positions_7nt_m1 versus M02921_2.00 (SP1); m=89/161; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.525213; ------rCCmCrCCCmc-- ; cor=; Ncor= a 0 0 0 0 0 0 46.3014 19.2941 6.62971 47.0964 0.606612 30.0733 0 0.183038 0.127065 38.9714 17.6778 0 0 c 0 0 0 0 0 0 2.23634 70.7016 75.4216 47.7062 99.0294 0.867355 99.6642 99.6034 82.9733 47.5875 51.7187 0 0 g 0 0 0 0 0 0 43.205 3.37809 1.8711 4.96516 0.181984 48.8261 0.030525 0.0610128 0 1.56416 10.4546 0 0 t 0 0 0 0 0 0 8.25724 6.62625 16.0776 0.232288 0.181984 20.2333 0.30525 0.152532 16.8996 11.877 20.1489 0 0

M08025_2.00_shift7 (M08025_2.00)
; positions_7nt_m1 versus M08025_2.00; m=90/161; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.524746; -------CCCCTCCCCCmc ; cor=; Ncor= a 0 0 0 0 0 0 0 2.8571 0 0 6.66669 22.8571 0 0.9524 0.9524 3.8095 5.7143 59.0477 24.7619 c 0 0 0 0 0 0 0 94.2857 82.8571 100 80.9523 0.9524 100 98.0952 93.3333 93.3333 94.2857 27.619 45.7143 g 0 0 0 0 0 0 0 1.9048 0 0 0 4.7619 0 0 0.9524 0.9524 0 2.8571 17.1429 t 0 0 0 0 0 0 0 0.9524 17.1429 0 12.381 71.4286 0 0.9524 4.7619 1.9048 0 10.4762 12.381

M08964_2.00_shift6 (M08964_2.00)
; positions_7nt_m1 versus M08964_2.00; m=91/161; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score=0.524642; ------GCCmCaCCCwyyy ; cor=; Ncor= a 0 0 0 0 0 0 9.8 17.4 10.2 53.8 1.6 63.6 1.4 8 0.4 48.2 3.8 12.6 8.8 c 0 0 0 0 0 0 7 72.2 81.6 43.4 87.8 1.6 88.4 89.2 88.6 15.8 47 29.2 42 g 0 0 0 0 0 0 68.2 4 0.8 0.6 1 23.2 4.4 0 0.4 1.8 23.6 12 20.6 t 0 0 0 0 0 0 15 6.4 7.4 2.2 9.6 11.6 5.8 2.8 10.6 34.2 25.6 46.2 28.6

M04565_2.00_rc_shift7 (GLIS1_rc)
; positions_7nt_m1 versus M04565_2.00_rc (GLIS1_rc); m=92/161; ncol2=15; w=-1; offset=-1; strand=R; shift=7; score=0.522349; -------kACCCCCCACrr ; cor=; Ncor= a 0 0 0 0 0 0 0 1.08815 88.8918 0.0555633 0 1.60944 0.0277778 1.25708 0.178473 88.7764 0.608144 26.1413 37.2721 c 0 0 0 0 0 0 0 18.7309 4.29329 99.8333 99.9861 93.8171 99.9722 98.7429 98.531 0 92.028 15.414 1.32203 g 0 0 0 0 0 0 0 40.9096 6.81495 0 0 0.0536481 0 0 0 10.8392 5.0899 41.2428 39.1138 t 0 0 0 0 0 0 0 39.2713 0 0.111127 0.0138947 4.51985 0 0 1.2905 0.384369 2.27393 17.2019 22.2921

M08999_2.00_shift7 (M08999_2.00)
; positions_7nt_m1 versus M08999_2.00; m=93/161; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.522323; -------CCCCTCCCCCac ; cor=; Ncor= a 0 0 0 0 0 0 0 1.8 1 0 8.4 16.6 0 0 0 0 0 62.8 18.4 c 0 0 0 0 0 0 0 95.8 98.6 99.8 86.6 0.4 100 100 98.8 99.2 100 23.6 61.6 g 0 0 0 0 0 0 0 0.6 0 0 0 3.8 0 0 0 0 0 2.8 6.8 t 0 0 0 0 0 0 0 1.8 0.4 0.2 5 79.2 0 0 1.2 0.8 0 10.8 13.2

M04658_2.00_shift5 (KLF14)
; positions_7nt_m1 versus M04658_2.00 (KLF14); m=94/161; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score=0.519813; -----crcCaCrCCCmcc- ; cor=; Ncor= a 0 0 0 0 0 18.6657 35.0563 17.8602 3.48319 54.8431 1.55897 35.8318 0 0.333264 0.287186 35.8439 11.1429 20.7362 0 c 0 0 0 0 0 38.9313 10.1459 62.6548 88.8259 20.6916 98.0821 0 99.6665 99.5938 80.7754 50.5193 62.5422 41.0331 0 g 0 0 0 0 0 19.7218 44.6686 8.18319 1.66264 16.1782 0 52.0917 0 0.0729015 0.0675733 2.51964 5.99601 13.7927 0 t 0 0 0 0 0 22.6812 10.1292 11.3018 6.02824 8.28698 0.358974 12.0765 0.333507 0 18.8698 11.1171 20.3189 24.4379 0

M03572_2.00_rc_shift11 (TBX1,TBX10_rc)
; positions_7nt_m1 versus M03572_2.00_rc (TBX1,TBX10_rc); m=95/161; ncol2=8; w=0; offset=3; strand=R; shift=11; score=0.519604; -----------TCACACCT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 7.51211 93.2474 0 96.8897 0 4.49869 4.14249 c 0 0 0 0 0 0 0 0 0 0 0 0.150225 86.2627 0.851895 99.9581 1.14504 100 80.23 7.39625 g 0 0 0 0 0 0 0 0 0 0 0 0.275413 5.2057 4.79093 0.0418901 1.73786 0 4.78112 0.829967 t 0 0 0 0 0 0 0 0 0 0 0 99.5744 1.01945 1.10981 0 0.227383 0 10.4902 87.6313

M06117_2.00_shift6 (SP6)
; positions_7nt_m1 versus M06117_2.00 (SP6); m=96/161; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.516881; ------gmymCGCCCmc-- ; cor=; Ncor= a 0 0 0 0 0 0 18.1818 27.2727 0 54.5455 0 4.54545 4.54545 0 0 54.5455 4.54545 0 0 c 0 0 0 0 0 0 4.54545 45.4545 59.0909 45.4545 100 0 95.4545 100 86.3636 31.8182 63.6364 0 0 g 0 0 0 0 0 0 59.0909 9.09091 0 0 0 86.3636 0 0 0 0 13.6364 0 0 t 0 0 0 0 0 0 18.1818 18.1818 40.9091 0 0 9.09091 0 0 13.6364 13.6364 18.1818 0 0

M07928_2.00_shift7 (EGR1)
; positions_7nt_m1 versus M07928_2.00 (EGR1); m=97/161; ncol2=15; w=-1; offset=-1; strand=D; shift=7; score=0.515727; -------yyCCGCCCmCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 10.2828 13.8817 14.91 0.7712 7.455 0 0 0 37.018 0 3.856 0.2571 c 0 0 0 0 0 0 0 46.7866 40.1028 76.3496 98.7147 0 100 100 94.0874 61.9537 100 0 93.3162 g 0 0 0 0 0 0 0 17.7378 19.7943 2.5707 0 88.1748 0 0 0 1.0283 0 88.689 1.7995 t 0 0 0 0 0 0 0 25.1928 26.2211 6.1697 0.5141 4.3702 0 0 5.9126 0 0 7.45501 4.6272

M08906_2.00_shift6 (ZNF281)
; positions_7nt_m1 versus M08906_2.00 (ZNF281); m=98/161; ncol2=15; w=-2; offset=-2; strand=D; shift=6; score=0.515052; ------yCCCCTCCCCCwc ; cor=; Ncor= a 0 0 0 0 0 0 9.12863 2.48963 1.65975 1.03734 12.8631 12.6556 0.414938 0.622407 0.622407 1.65975 1.03734 47.0954 14.1079 c 0 0 0 0 0 0 27.1784 87.3444 94.1909 97.9253 74.0664 0.207469 96.473 97.9253 89.6266 97.5104 96.888 17.4274 50.8299 g 0 0 0 0 0 0 24.8963 1.65975 0.622407 0 0.207469 10.9959 0.414938 0.414938 1.65975 0.414938 0.829876 7.67635 18.0498 t 0 0 0 0 0 0 38.7967 8.50622 3.52697 1.03734 12.8631 76.1411 2.6971 1.03734 8.09129 0.414938 1.24481 27.8008 17.0124

M00241_2.00_shift9 (KLF11)
; positions_7nt_m1 versus M00241_2.00 (KLF11); m=99/161; ncol2=8; w=0; offset=1; strand=D; shift=9; score=0.514109; ---------mCGCCCCC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 38.4202 0.0499002 10.0299 5.03992 5.03992 0.0499002 25 0.0664894 0 0 c 0 0 0 0 0 0 0 0 0 61.4264 99.8503 10.0299 94.8603 89.8703 99.8503 74.9002 93.1516 0 0 g 0 0 0 0 0 0 0 0 0 0.0766871 0.0499002 79.8902 0.0499002 5.03992 0.0499002 0.0499002 0.0664894 0 0 t 0 0 0 0 0 0 0 0 0 0.0766871 0.0499002 0.0499002 0.0499002 0.0499002 0.0499002 0.0499002 6.71543 0 0

M03552_2.00_rc_shift11 (TBX5_rc)
; positions_7nt_m1 versus M03552_2.00_rc (TBX5_rc); m=100/161; ncol2=8; w=0; offset=3; strand=R; shift=11; score=0.511173; -----------TmACACCT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 11.2929 26.4374 75.4181 0 84.0634 1.52838 5.63082 8.2503 c 0 0 0 0 0 0 0 0 0 0 0 13.6872 52.1237 8.40301 98.5254 7.73532 98.4716 76.376 16.3013 g 0 0 0 0 0 0 0 0 0 0 0 3.03272 17.7983 9.40635 0 6.10438 0 8.04403 3.54723 t 0 0 0 0 0 0 0 0 0 0 0 71.9872 3.64057 6.77258 1.4746 2.09692 0 9.9492 71.9012

M09426_2.00_rc_shift10 (TBX3_rc)
; positions_7nt_m1 versus M09426_2.00_rc (TBX3_rc); m=101/161; ncol2=11; w=0; offset=2; strand=R; shift=10; score=0.508065; ----------yTscCACCt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 8.33333 6.90476 15.7143 24.2857 1.42857 94.2857 1.19048 0.238095 23.0952 c 0 0 0 0 0 0 0 0 0 0 40.2381 20.2381 42.381 43.5714 96.9048 1.42857 84.2857 92.381 17.381 g 0 0 0 0 0 0 0 0 0 0 9.04762 2.61905 26.1905 21.9048 0 0.714286 13.3333 0 0.47619 t 0 0 0 0 0 0 0 0 0 0 42.381 70.2381 15.7143 10.2381 1.66667 3.57143 1.19048 7.38095 59.0476

M02910_2.00_shift6 (SP3,SP6)
; positions_7nt_m1 versus M02910_2.00 (SP3,SP6); m=102/161; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.504028; ------sCCACrCCCmc-- ; cor=; Ncor= a 0 0 0 0 0 0 22.3999 17.6351 8.55439 71.6826 2.25957 26.1176 2.06696 2.5942 0.957055 43.3481 12.7548 0 0 c 0 0 0 0 0 0 30.0549 70.9806 83.8812 23.8364 93.3343 3.89076 96.2009 95.7826 81.092 45.3752 55.8995 0 0 g 0 0 0 0 0 0 35.5782 4.23155 3.17299 2.67418 1.2004 55.5378 0.55313 0.768116 1.5092 2.34931 9.05016 0 0 t 0 0 0 0 0 0 11.9671 7.15283 4.39142 1.80688 3.20576 14.4538 1.17904 0.855072 16.4417 8.92737 22.2955 0 0

M08884_2.00_shift7 (EGR2)
; positions_7nt_m1 versus M08884_2.00 (EGR2); m=103/161; ncol2=18; w=-1; offset=-1; strand=D; shift=7; score=0.503879; -------yyCCdCCCmCwC ; cor=; Ncor= a 0 0 0 0 0 0 0 13.6 8.2 10.8 6.2 34.6 2 6 1.8 48.6 1.4 39.6 5.6 c 0 0 0 0 0 0 0 56.2 50.2 78.2 87.4 2.2 91.6 89 79.4 46.2 93 4.4 76.6 g 0 0 0 0 0 0 0 4.8 7.4 3.4 0.6 28.2 4 1.4 0.6 1.2 2.2 19 10.2 t 0 0 0 0 0 0 0 25.4 34.2 7.6 5.8 35 2.4 3.6 18.2 4 3.4 37 7.6

M02890_2.00_shift7 (EGR4)
; positions_7nt_m1 versus M02890_2.00 (EGR4); m=104/161; ncol2=16; w=-1; offset=-1; strand=D; shift=7; score=0.502537; -------awMCGCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 38.191 29.2683 72.6804 0 0.364964 0.819672 1.24481 0.421941 86.8852 0.421941 0.735294 0 c 0 0 0 0 0 0 0 20.603 24.3902 25.7732 100 0 97.541 98.7552 98.3122 12.0219 99.1561 0.735294 100 g 0 0 0 0 0 0 0 17.0854 3.90244 0 0 99.2701 0 0 0 1.0929 0.421941 97.4265 0 t 0 0 0 0 0 0 0 24.1206 42.439 1.54639 0 0.364964 1.63934 0 1.26582 0 0 1.10294 0

M10186_2.00_shift12 (KLF12)
; positions_7nt_m1 versus M10186_2.00 (KLF12); m=105/161; ncol2=7; w=0; offset=4; strand=D; shift=12; score=0.500646; ------------cccACtG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 18.1818 18.1818 9.09091 81.8182 0 18.1818 9.09091 c 0 0 0 0 0 0 0 0 0 0 0 0 54.5455 63.6364 63.6364 0 81.8182 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 9.09091 9.09091 9.09091 18.1818 9.09091 18.1818 72.7273 t 0 0 0 0 0 0 0 0 0 0 0 0 18.1818 9.09091 18.1818 0 9.09091 63.6364 18.1818

M02932_2.00_shift7 (M02932_2.00)
; positions_7nt_m1 versus M02932_2.00; m=106/161; ncol2=16; w=-1; offset=-1; strand=D; shift=7; score=0.49801; -------mhmCGCCCmCkC ; cor=; Ncor= a 0 0 0 0 0 0 0 32.3142 32.2785 61.8182 0 7.54445 0 0.157812 0 51.7114 0.314961 0.422833 0.157978 c 0 0 0 0 0 0 0 32.4196 30.9072 36.6753 99.6845 0.432484 99.9473 99.737 100 48.1306 99.5276 16.7321 99.842 g 0 0 0 0 0 0 0 11.3337 3.69198 0.363636 0.0525762 91.11 0.0527148 0.105208 0 0.157978 0 25.5814 0 t 0 0 0 0 0 0 0 23.9325 33.1224 1.14286 0.262881 0.913023 0 0 0 0 0.15748 57.2637 0

M06171_2.00_shift6 (M06171_2.00)
; positions_7nt_m1 versus M06171_2.00; m=107/161; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.495861; ------RCCACACCCac-- ; cor=; Ncor= a 0 0 0 0 0 0 25 20 0 80 0 85 0 0 0 65 20 0 0 c 0 0 0 0 0 0 0 70 100 10 100 0 100 100 100 15 55 0 0 g 0 0 0 0 0 0 75 10 0 10 0 10 0 0 0 0 5 0 0 t 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 20 20 0 0

M08990_2.00_shift7 (M08990_2.00)
; positions_7nt_m1 versus M08990_2.00; m=108/161; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.491663; -------smCCwCCCm--- ; cor=; Ncor= a 0 0 0 0 0 0 0 6.59609 61.2378 0 11.7264 49.5114 0 2.9316 0 30.1303 0 0 0 c 0 0 0 0 0 0 0 27.443 26.7101 70.684 76.5472 17.5896 94.1368 94.1368 85.342 51.9544 0 0 0 g 0 0 0 0 0 0 0 44.3811 8.79479 23.4528 0 2.9316 5.86319 2.9316 5.86319 13.1922 0 0 0 t 0 0 0 0 0 0 0 21.5798 3.25733 5.86319 11.7264 29.9674 0 0 8.79479 4.72313 0 0 0

M08900_2.00_shift7 (ZIC1)
; positions_7nt_m1 versus M08900_2.00 (ZIC1); m=109/161; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.491663; -------smCCwCCCm--- ; cor=; Ncor= a 0 0 0 0 0 0 0 6.59609 61.2378 0 11.7264 49.5114 0 2.9316 0 30.1303 0 0 0 c 0 0 0 0 0 0 0 27.443 26.7101 70.684 76.5472 17.5896 94.1368 94.1368 85.342 51.9544 0 0 0 g 0 0 0 0 0 0 0 44.3811 8.79479 23.4528 0 2.9316 5.86319 2.9316 5.86319 13.1922 0 0 0 t 0 0 0 0 0 0 0 21.5798 3.25733 5.86319 11.7264 29.9674 0 0 8.79479 4.72313 0 0 0

M02888_2.00_shift6 (KLF16)
; positions_7nt_m1 versus M02888_2.00 (KLF16); m=110/161; ncol2=11; w=-2; offset=-2; strand=D; shift=6; score=0.490917; ------gmCMCgCCCMC-- ; cor=; Ncor= a 0 0 0 0 0 0 21.8146 33.2964 3.5942 69.9939 3.85064 18.5102 0.493827 0.123305 0.925926 26.152 1.57094 0 0 c 0 0 0 0 0 0 17.5237 59.5713 93.4493 28.0584 94.049 6.4432 99.5062 99.3835 93.287 70.3172 79.136 0 0 g 0 0 0 0 0 0 52.8005 2.84553 0.347826 1.94766 0.991832 60.0372 0 0.493218 0.173611 1.13704 1.12911 0 0 t 0 0 0 0 0 0 7.86112 4.28677 2.6087 0 1.10852 15.0093 0 0 5.61343 2.39378 18.164 0 0

M10229_2.00_shift7 (ZIC3)
; positions_7nt_m1 versus M10229_2.00 (ZIC3); m=111/161; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.490124; -------gaccmCCCr--- ; cor=; Ncor= a 0 0 0 0 0 0 0 14.2857 62.8571 11.4286 8.57143 54.2857 5.71429 11.4286 0 42.8571 0 0 0 c 0 0 0 0 0 0 0 14.2857 8.57143 54.2857 65.7143 28.5714 82.8571 82.8571 88.5714 14.2857 0 0 0 g 0 0 0 0 0 0 0 62.8571 20 17.1429 11.4286 2.85714 5.71429 2.85714 2.85714 25.7143 0 0 0 t 0 0 0 0 0 0 0 8.57143 8.57143 17.1429 14.2857 14.2857 5.71429 2.85714 8.57143 17.1429 0 0 0

M00617_2.00_shift7 (M00617_2.00)
; positions_7nt_m1 versus M00617_2.00; m=112/161; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.489106; -------ccmCGCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 0 23.489 19.4417 52.2892 0.827505 19.3067 3.00723e-10 0.283087 0.101233 35.4676 0 0 0 c 0 0 0 0 0 0 0 38.3414 47.819 36.118 98.5594 3.09116e-07 99.9999 99.2854 80.6139 23.3039 0 0 0 g 0 0 0 0 0 0 0 14.6807 9.46331 5.97026 6.91425e-05 72.9993 3.40174e-19 0.430847 0.375188 8.48772 0 0 0 t 0 0 0 0 0 0 0 23.489 23.276 5.62258 0.61303 7.69407 0 0 18.9096 32.7408 0 0 0

M08287_2.00_shift7 (PATZ1)
; positions_7nt_m1 versus M08287_2.00 (PATZ1); m=113/161; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score=0.489057; -------CCCCkCCC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 7.7333 0 0 22.1333 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 94.1333 81.0667 100 100 0 100 100 84 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 35.2 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 5.8667 11.2 0 0 42.6667 0 0 16 0 0 0 0

M08455_2.00_shift3 (M08455_2.00)
; positions_7nt_m1 versus M08455_2.00; m=114/161; ncol2=16; w=-5; offset=-5; strand=D; shift=3; score=0.488228; ---akytmGkTTCYCACrv ; cor=; Ncor= a 0 0 0 50 10 20 20 30 10 0 0 0 0 0 0 100 0 60 30 c 0 0 0 20 20 40 20 40 10 0 0 0 100 70 100 0 100 0 30 g 0 0 0 10 30 10 20 20 70 50 0 0 0 0 0 0 0 40 30 t 0 0 0 20 40 30 40 10 10 50 100 100 0 30 0 0 0 0 10

M07683_2.00_rc_shift5 (ZNF75D_rc)
; positions_7nt_m1 versus M07683_2.00_rc (ZNF75D_rc); m=115/161; ncol2=12; w=-3; offset=-3; strand=R; shift=5; score=0.482627; -----AGGcTTTCCCAC-- ; cor=; Ncor= a 0 0 0 0 0 85.8624 9.22489 10.5349 21.2336 0.272926 0.272926 0.0545852 2.23799 3.54803 0.0545852 95.0328 0.0545852 0 0 c 0 0 0 0 0 2.01965 2.23799 9.66157 51.583 14.6834 5.07642 0.272926 80.8406 91.1026 98.5262 0.0545852 99.6179 0 0 g 0 0 0 0 0 10.0983 81.2773 78.8755 17.5218 0.0545852 2.23799 0.272926 1.80131 0.0545852 0.0545852 1.58297 0.0545852 0 0 t 0 0 0 0 0 2.01965 7.25983 0.927948 9.66157 84.9891 92.4127 99.3996 15.1201 5.29476 1.36463 3.32969 0.272926 0 0

M04541_2.00_shift9 (ZNF282)
; positions_7nt_m1 versus M04541_2.00 (ZNF282); m=116/161; ncol2=14; w=0; offset=1; strand=D; shift=9; score=0.47676; ---------wtTCCCmyaA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 25.0583 21.0127 8.34057 1.24434 1.37773 1.0989 60.9407 3.43716 49.8837 84.8814 c 0 0 0 0 0 0 0 0 0 22.028 16.0127 10.6864 97.1719 98.6223 94.3956 26.9939 59.8281 15.2326 14.1304 g 0 0 0 0 0 0 0 0 0 19.5804 8.60759 6.34231 0.904977 0 0.43956 0.817996 4.18904 21.2791 0.790514 t 0 0 0 0 0 0 0 0 0 33.3333 54.3671 74.6308 0.678733 0 4.06593 11.2474 32.5456 13.6047 0.197628

M00766_2.00_shift7 (M00766_2.00)
; positions_7nt_m1 versus M00766_2.00; m=117/161; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score=0.474922; -------GTsCTCCc---- ; cor=; Ncor= a 0 0 0 0 0 0 0 4.54545 3.57143 3.57143 21.4286 3.57143 3.57143 11.5385 10 0 0 0 0 c 0 0 0 0 0 0 0 9.09091 3.57143 39.2857 71.4286 3.57143 89.2857 80.7692 60 0 0 0 0 g 0 0 0 0 0 0 0 81.8182 3.57143 53.5714 3.57143 3.57143 3.57143 3.84615 15 0 0 0 0 t 0 0 0 0 0 0 0 4.54545 89.2857 3.57143 3.57143 89.2857 3.57143 3.84615 15 0 0 0 0

M07563_2.00_shift7 (ZNF263)
; positions_7nt_m1 versus M07563_2.00 (ZNF263); m=118/161; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.472386; -------STCCTCCCy--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.0652742 0.0652742 0.0652742 0.848564 0.0652742 0.0652742 0.0652742 5.5483 6.33159 0 0 0 c 0 0 0 0 0 0 0 70.8225 0.0652742 82.5718 96.1488 0.0652742 99.8042 99.8042 75.5222 46.2794 0 0 0 g 0 0 0 0 0 0 0 26.6971 0.0652742 17.2977 0.0652742 0.0652742 0.0652742 0.0652742 0.0652742 19.9086 0 0 0 t 0 0 0 0 0 0 0 2.41514 99.8042 0.0652742 2.93734 99.8042 0.0652742 0.0652742 18.8642 27.4804 0 0 0

M00229_2.00_shift11 (EGR2)
; positions_7nt_m1 versus M00229_2.00 (EGR2); m=119/161; ncol2=9; w=0; offset=3; strand=D; shift=11; score=0.470487; -----------rmmCmCgc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 28.4132 41.6276 41.5792 3.15777 59.5182 0.0803085 13.3839 6.76441 c 0 0 0 0 0 0 0 0 0 0 0 19.2373 29.0426 48.7937 90.0051 28.3969 98.3094 6.71306 65.4754 g 0 0 0 0 0 0 0 0 0 0 0 31.089 21.9499 2.82244 0.0170751 11.3167 0.0132749 63.058 6.1822 t 0 0 0 0 0 0 0 0 0 0 0 21.2605 7.37992 6.80462 6.82005 0.76819 1.59699 16.845 21.578

M07615_2.00_shift7 (ZNF641)
; positions_7nt_m1 versus M07615_2.00 (ZNF641); m=120/161; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score=0.469967; -------ACCCCCCCA--- ; cor=; Ncor= a 0 0 0 0 0 0 0 99.6073 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 79.712 0 0 0 c 0 0 0 0 0 0 0 0.13089 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 20.0262 0 0 0 g 0 0 0 0 0 0 0 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0 0 0 t 0 0 0 0 0 0 0 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0 0 0

M07602_2.00_rc_shift3 (ZNF18_rc)
; positions_7nt_m1 versus M07602_2.00_rc (ZNF18_rc); m=121/161; ncol2=15; w=-5; offset=-5; strand=R; shift=3; score=0.468295; ---mcscswgyTCACACy- ; cor=; Ncor= a 0 0 0 26.6667 22.4691 21.2346 20.4938 12.8395 32.3457 24.4444 1.4815 6.6667 0 76.5432 0 98.7654 0 15.5556 0 c 0 0 0 33.5802 43.2099 31.358 45.9259 48.642 16.2963 22.963 27.6543 0.7407 100 17.7778 100 0 93.0864 47.1605 0 g 0 0 0 21.7284 19.5062 26.9136 20.4938 26.6667 24.4444 52.0988 4.1975 2.4691 0 0.4938 0 0 4.6914 1.2346 0 t 0 0 0 18.0247 14.8148 20.4938 13.0864 11.8519 26.9136 0.4938 66.6667 90.1235 0 5.1852 0 1.2346 2.2222 36.0494 0

M01864_2.00_shift12 (M01864_2.00)
; positions_7nt_m1 versus M01864_2.00; m=122/161; ncol2=9; w=0; offset=4; strand=D; shift=12; score=0.468211; ------------CCCmCGc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 16.0527 1.55222 2.3878 48.8627 1.22013 16.7571 8.3944 c 0 0 0 0 0 0 0 0 0 0 0 0 73.3965 93.6616 88.2675 47.8952 96.4432 2.79778 59.0016 g 0 0 0 0 0 0 0 0 0 0 0 0 4.64539 4.13583 1.01043 1.76653 0.65636 68.6365 10.4601 t 0 0 0 0 0 0 0 0 0 0 0 0 5.90545 0.650307 8.33424 1.47553 1.68027 11.8086 22.144

M00787_2.00_shift6 (M00787_2.00)
; positions_7nt_m1 versus M00787_2.00; m=123/161; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.466616; ------rccmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 25.986 23.1178 19.3153 50.6834 0.194537 30.2468 0.00336185 0.00625172 2.24714 39.1927 0 0 0 c 0 0 0 0 0 0 15.6045 47.0215 51.4647 34.6604 99.7699 0.00388508 99.9566 99.9931 79.0168 22.3872 0 0 0 g 0 0 0 0 0 0 41.1638 13.0737 10.2872 8.63306 0.00306676 62.1399 0.00261821 0.000459717 0.0148413 12.4098 0 0 0 t 0 0 0 0 0 0 17.2456 16.787 18.9328 6.02308 0.0324799 7.60943 0.0374307 0 18.7213 26.0102 0 0 0

M08086_2.00_shift6 (KLF5)
; positions_7nt_m1 versus M08086_2.00 (KLF5); m=124/161; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score= 0.4654; ------gCCMCrCCCh--- ; cor=; Ncor= a 0 0 0 0 0 0 10.4989 0 0 25.5455 0 37.1097 0 0 0 28.7635 0 0 0 c 0 0 0 0 0 0 14.863 87.4293 88.2228 70.3034 100 0 100 100 96.5028 41.1065 0 0 0 g 0 0 0 0 0 0 55.6315 0 0 0 0 38.0721 0 0 0 0 0 0 0 t 0 0 0 0 0 0 19.0067 12.5707 11.7772 4.15105 0 24.8182 0 0 3.49717 30.13 0 0 0

M00779_2.00_shift6 (M00779_2.00)
; positions_7nt_m1 versus M00779_2.00; m=125/161; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.464768; ------rccmCrCCYh--- ; cor=; Ncor= a 0 0 0 0 0 0 27.1429 23.9158 19.9845 44.052 6.52389 36.7441 3.85933 3.10594 4.58462 32.2624 0 0 0 c 0 0 0 0 0 0 17.8341 41.8687 46.7566 34.3077 84.3918 0.00329278 94.6792 96.8649 70.2954 25.126 0 0 0 g 0 0 0 0 0 0 36.2745 15.4026 12.8707 12.0056 0.00980827 49.5994 0.013043 0.0134782 0.0240579 15.3929 0 0 0 t 0 0 0 0 0 0 18.7485 18.8128 20.3882 9.6347 9.07452 13.6533 1.44845 0.0156594 25.0959 27.2187 0 0 0

M04387_2.00_shift6 (ZNF263)
; positions_7nt_m1 versus M04387_2.00 (ZNF263); m=126/161; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.459867; ------sGTsCTCCCy--- ; cor=; Ncor= a 0 0 0 0 0 0 21.9248 3.01455 0 2.60736 2.69984 1.6333 0.662617 4.82615 17.0004 20.5464 0 0 0 c 0 0 0 0 0 0 45.1025 3.69023 5.79088 28.9494 93.0122 5.79557 97.0182 91.178 71.8022 34.5475 0 0 0 g 0 0 0 0 0 0 25.8542 91.3202 0 67.3696 2.17046 0 2.31916 2.02387 2.86065 13.0336 0 0 0 t 0 0 0 0 0 0 7.11845 1.97505 94.2091 1.07362 2.11752 92.5711 0 1.97198 8.33674 31.8725 0 0 0

M00134_2.00_shift6 (M00134_2.00)
; positions_7nt_m1 versus M00134_2.00; m=127/161; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.459217; ------gccmCgCCCh--- ; cor=; Ncor= a 0 0 0 0 0 0 23.4441 21.9242 17.7318 51.5538 0.989471 22.8736 0.00886864 0.0191497 0.112067 34.2124 0 0 0 c 0 0 0 0 0 0 18.0766 49.7789 53.8047 35.2557 97.4574 1.03044 99.9596 99.9363 82.3801 25.8571 0 0 0 g 0 0 0 0 0 0 41.4554 11.5605 7.65501 8.95871 0.0320459 66.0217 0.0241075 0.0173274 0.0228534 7.71053 0 0 0 t 0 0 0 0 0 0 17.0239 16.7365 20.8085 4.2318 1.52107 10.0743 0 0.0271748 17.485 32.22 0 0 0

M04606_2.00_shift3 (SP1)
; positions_7nt_m1 versus M04606_2.00 (SP1); m=128/161; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score= 0.4586; ---twrGCCmCGCCCmCw- ; cor=; Ncor= a 0 0 0 16.9909 56.8037 51.2491 18.8739 5.40541 0.947551 64.5165 0.218648 12.3046 0 0 0 52.4992 4.05832 28.9973 0 c 0 0 0 22.2937 5.17881 2.43829 1.62252 91.9364 84.7191 33.994 99.4534 1.27804 100 100 93.8199 43.1881 71.4114 22.203 0 g 0 0 0 16.7869 2.76005 42.8571 77.9504 1.0395 0.987588 1.06907 0 80.2991 0 0 0.120882 0.563852 2.16444 6.4177 0 t 0 0 0 43.9285 35.2575 3.4555 1.55318 1.61865 13.3458 0.42042 0.327971 6.11829 0 0 6.05923 3.74886 22.3658 42.3819 0

M04386_2.00_shift6 (ZNF263)
; positions_7nt_m1 versus M04386_2.00 (ZNF263); m=129/161; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.458356; ------vGTsCTCCCy--- ; cor=; Ncor= a 0 0 0 0 0 0 29.7705 4.34783 0 3.37328 3.93013 2.36613 0 0.455433 10.6842 14.6885 0 0 0 c 0 0 0 0 0 0 36.7869 7.37986 2.98982 27.2526 95.1341 2.67746 96.764 99.2193 80.2632 32.6557 0 0 0 g 0 0 0 0 0 0 25.9016 87.2426 0 67.6875 0 0 0 0.325309 2.78947 20.9836 0 0 0 t 0 0 0 0 0 0 7.54098 1.02975 97.0102 1.68664 0.935745 94.9564 3.23604 0 6.26316 31.6721 0 0 0

M08243_2.00_shift6 (KLF4)
; positions_7nt_m1 versus M08243_2.00 (KLF4); m=130/161; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.455444; ------gCCmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 21.5541 6.6731 2.8826 47.0176 0.7831 49.183 0.3685 0.2997 0.1386 40.7052 0 0 0 c 0 0 0 0 0 0 6.4761 87.4843 89.9686 50.1722 98.364 0.2536 98.4801 99.0776 97.6252 23.5703 0 0 0 g 0 0 0 0 0 0 66.0954 3.0022 1.0613 1.8427 0.346 44.1938 0.8289 0.3 0.2081 1.8688 0 0 0 t 0 0 0 0 0 0 5.8745 2.8404 6.0875 0.9675 0.5068 6.3696 0.3225 0.3227 2.028 33.8558 0 0 0

M08246_2.00_shift6 (KLF10)
; positions_7nt_m1 versus M08246_2.00 (KLF10); m=131/161; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.455444; ------gCCmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 21.554 6.673 2.8825 47.0175 0.7831 49.183 0.3685 0.2997 0.1386 40.7052 0 0 0 c 0 0 0 0 0 0 6.4761 87.4843 89.9687 50.1723 98.3641 0.2537 98.4802 99.0777 97.6252 23.5703 0 0 0 g 0 0 0 0 0 0 66.0954 3.0023 1.0613 1.8427 0.3461 44.1938 0.8289 0.3001 0.2082 1.8688 0 0 0 t 0 0 0 0 0 0 5.8745 2.8403 6.0874 0.9675 0.5068 6.3696 0.3225 0.3227 2.0279 33.8557 0 0 0

M08321_2.00_shift5 (ZNF281)
; positions_7nt_m1 versus M08321_2.00 (ZNF281); m=132/161; ncol2=12; w=-3; offset=-3; strand=D; shift=5; score=0.454946; -----ybCCCCTCCCCC-- ; cor=; Ncor= a 0 0 0 0 0 9.89583 12.5744 0.967262 1.86012 0.0744048 10.4911 9.59821 0.0744048 0.0744048 0.0744048 0.0744048 0.0744048 0 0 c 0 0 0 0 0 39.3601 27.753 92.3363 96.2054 99.7768 77.1577 0.0744048 99.7768 99.7768 96.2054 99.7768 99.7768 0 0 g 0 0 0 0 0 24.4792 27.1577 2.75298 0.0744048 0.0744048 0.0744048 17.0387 0.0744048 0.0744048 0.0744048 0.0744048 0.0744048 0 0 t 0 0 0 0 0 26.2649 32.5149 3.94345 1.86012 0.0744048 12.2768 73.2887 0.0744048 0.0744048 3.64583 0.0744048 0.0744048 0 0

M08290_2.00_shift6 (MAZ)
; positions_7nt_m1 versus M08290_2.00 (MAZ); m=133/161; ncol2=9; w=-2; offset=-2; strand=D; shift=6; score=0.453703; ------sCCCCkCCC---- ; cor=; Ncor= a 0 0 0 0 0 0 2.21823 0.059952 0.059952 0.059952 0.059952 8.93285 0.059952 0.059952 0.059952 0 0 0 0 c 0 0 0 0 0 0 52.8177 92.1463 99.8201 99.8201 99.8201 0.059952 99.8201 99.8201 88.789 0 0 0 0 g 0 0 0 0 0 0 37.7098 0.059952 0.059952 0.059952 0.059952 35.3118 0.059952 0.059952 0.059952 0 0 0 0 t 0 0 0 0 0 0 7.2542 7.73381 0.059952 0.059952 0.059952 55.6954 0.059952 0.059952 11.0911 0 0 0 0

M00231_2.00_shift12 (EGR2)
; positions_7nt_m1 versus M00231_2.00 (EGR2); m=134/161; ncol2=8; w=0; offset=4; strand=D; shift=12; score=0.449469; ------------mCCmCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 36.8338 0.0120424 0.0120424 43.3646 0.0120424 10.9824 0.013151 c 0 0 0 0 0 0 0 0 0 0 0 0 56.1185 99.9639 99.9639 56.6113 98.7596 2.45002 93.3851 g 0 0 0 0 0 0 0 0 0 0 0 0 1.77069 0.0120424 0.0120424 0.0120424 1.21628 84.1175 0.013151 t 0 0 0 0 0 0 0 0 0 0 0 0 5.277 0.0120424 0.0120424 0.0120424 0.0120424 2.45002 6.58864

M09502_2.00_shift6 (KLF5)
; positions_7nt_m1 versus M09502_2.00 (KLF5); m=135/161; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.445431; ------GCCmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 14.8 18.4 2.2 52.6 1.2 49 0.1 0.1 0.1 35.7 0 0 0 c 0 0 0 0 0 0 1.9 69.4 92.2 40.5 97.2 0.1 99.7 99.7 88.2 22.4 0 0 0 g 0 0 0 0 0 0 75.6 6 0.1 2.3 0.1 42.8 0.1 0.1 0.1 5.5 0 0 0 t 0 0 0 0 0 0 7.7 6.2 5.5 4.6 1.5 8.1 0.1 0.1 11.6 36.4 0 0 0

M07626_2.00_shift10 (ZNF282)
; positions_7nt_m1 versus M07626_2.00 (ZNF282); m=136/161; ncol2=6; w=0; offset=2; strand=D; shift=10; score=0.44361; ----------CTCCCs--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 0 0 0 c 0 0 0 0 0 0 0 0 0 0 99.7614 0.0795234 99.7614 99.7614 99.7614 56.9037 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 42.9372 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0.0795234 99.7614 0.0795234 0.0795234 0.0795234 0.0795234 0 0 0

M06160_2.00_shift3 (M06160_2.00)
; positions_7nt_m1 versus M06160_2.00; m=137/161; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score=0.440686; ---kwrGCCmCGCCCmcy- ; cor=; Ncor= a 0 0 0 11.04 33.6 27.8219 17.3291 6.51828 4.45151 39.4277 0.63593 3.6566 0.794913 0.63593 1.27186 43.0843 7.3955 22.8525 0 c 0 0 0 19.04 8.96 11.2878 0.953895 81.2401 72.496 60.5723 99.2051 0 99.2051 99.3641 81.876 42.1304 62.701 27.2285 0 g 0 0 0 25.12 14.4 42.4483 74.2448 5.40541 1.27186 0 0 90.461 0 0 0 1.43084 7.55627 13.128 0 t 0 0 0 44.8 43.04 18.442 7.47218 6.83625 21.7806 0 0.158983 5.88235 0 0 16.8521 13.3545 22.3473 36.7909 0

M08894_2.00_shift6 (KLF4)
; positions_7nt_m1 versus M08894_2.00 (KLF4); m=138/161; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.439227; ------rCCmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 25 6.6 4.8 55.4 0 52.6 0.6 0.6 0.4 35.6 0 0 0 c 0 0 0 0 0 0 6.8 88.2 88.6 43.8 99.2 0.4 97.8 99.2 98.8 20.4 0 0 0 g 0 0 0 0 0 0 62.8 3.8 1.6 0.4 0.4 44.4 0.4 0 0 2 0 0 0 t 0 0 0 0 0 0 5.4 1.4 5 0.4 0.4 2.6 1.2 0.2 0.8 42 0 0 0

M03704_2.00_shift6 (M03704_2.00)
; positions_7nt_m1 versus M03704_2.00; m=139/161; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score=0.438789; ------rCCACrCCCh--- ; cor=; Ncor= a 0 0 0 0 0 0 37.9958 13.3205 9.30476 70.6121 0 35.0795 0 3.46062 0.998238 39.3436 0 0 0 c 0 0 0 0 0 0 15.2401 75.7239 82.0178 19.982 99.8727 1.39697 99.241 93.6158 92.1315 29.4558 0 0 0 g 0 0 0 0 0 0 43.8935 4.92278 3.816 5.49055 0 60.8847 0 1.43198 0.0587199 5.35937 0 0 0 t 0 0 0 0 0 0 2.87056 6.03282 4.86147 3.91539 0.127307 2.63873 0.759013 1.49165 6.81151 25.8413 0 0 0

M04529_2.00_shift2 (ZNF444)
; positions_7nt_m1 versus M04529_2.00 (ZNF444); m=140/161; ncol2=16; w=-6; offset=-6; strand=D; shift=2; score=0.436399; --ccGTCCCCCTCCCCCm- ; cor=; Ncor= a 0 0 18.4334 8.68599 21.0837 15.4828 0.210084 0.26866 0.175152 0.0233454 0.687886 0.418118 0.0700853 0.21028 0.0935126 0.287158 0.174948 26.0202 0 c 0 0 36.7144 67.4881 6.29233 11.9161 99.288 99.5211 99.5213 99.4631 99.1139 0.778165 99.5795 99.5794 99.6143 94.8771 99.4868 44.137 0 g 0 0 24.6717 10.7262 70.035 1.145 0.233427 0.093447 0 0.163418 0.0466364 0.139373 0 0.0350467 0.0935126 0.160809 0.0349895 7.24672 0 t 0 0 20.1806 13.0997 2.58903 71.4561 0.268441 0.116809 0.303596 0.350181 0.151568 98.6643 0.350426 0.175234 0.198714 4.67494 0.303242 22.5962 0

M04530_2.00_shift2 (ZNF444)
; positions_7nt_m1 versus M04530_2.00 (ZNF444); m=141/161; ncol2=16; w=-6; offset=-6; strand=D; shift=2; score=0.435672; --ccrtCCCCCTCCCCCm- ; cor=; Ncor= a 0 0 14.2547 10.0366 35.0522 21.7179 0.373886 0.461095 0.373778 0 0.78853 0.358372 0.387041 0.13002 0.628661 0.311791 0.45977 29.0635 0 c 0 0 44.11 65.1368 5.80812 13.4159 99.0653 99.3228 99.1518 99.812 98.7814 0.874427 98.9392 99.7544 98.6998 95.7058 98.9943 42.1769 0 g 0 0 21.5485 11.3731 56.9684 0.675169 0.345125 0.0432277 0 0 0.157706 0.0286697 0.0716743 0.0866802 0.171453 0 0.445402 9.19091 0 t 0 0 20.0868 13.4535 2.17126 64.191 0.215703 0.172911 0.474411 0.18797 0.272401 98.7385 0.602064 0.0288934 0.500071 3.98243 0.100575 19.5687 0

M04467_2.00_shift4 (ZNF740)
; positions_7nt_m1 versus M04467_2.00 (ZNF740); m=142/161; ncol2=13; w=-4; offset=-4; strand=D; shift=4; score=0.434452; ----cygCCCCCCCCAC-- ; cor=; Ncor= a 0 0 0 0 16.3462 8.51666 16.5473 3.08014 1.76844 2.31023 1.0166 1.14401 1.92819 1.04027 2.9304 83.0305 7.7469 0 0 c 0 0 0 0 49.2445 35.7951 15.4853 86.9019 96.9303 95.8086 98.3734 97.7793 96.6755 97.7852 95.9374 12.5147 71.2892 0 0 g 0 0 0 0 14.011 4.99686 55.9397 9.65909 1.2012 0.627063 0.169434 0.336474 0.49867 0.402685 0.566101 1.17233 1.33057 0 0 t 0 0 0 0 20.3984 50.6914 12.0277 0.358852 0.1001 1.25413 0.440529 0.740242 0.897606 0.771812 0.566101 3.28253 19.6334 0 0

M04468_2.00_shift4 (ZNF740)
; positions_7nt_m1 versus M04468_2.00 (ZNF740); m=143/161; ncol2=13; w=-4; offset=-4; strand=D; shift=4; score=0.433972; ----cygCCCCCCCCAC-- ; cor=; Ncor= a 0 0 0 0 10.4898 3.7037 13.6842 3.32393 0.10327 0.892538 0.757303 2.56321 1.37761 2.66999 0 84.486 6.82022 0 0 c 0 0 0 0 61.1477 45.0794 12.2978 85.5127 93.8726 96.9654 98.7018 92.345 96.609 97.33 76.6761 11.2627 71.4927 0 0 g 0 0 0 0 11.0015 3.59788 58.6906 10.5989 1.13597 1.21385 0.036062 0.311742 0 0 22.4426 0.729695 0.17948 0 0 t 0 0 0 0 17.3611 47.619 15.3273 0.56444 4.88812 0.92824 0.504868 4.78005 2.01342 0 0.881335 3.52157 21.5076 0 0

M07754_2.00_shift4 (ZNF468)
; positions_7nt_m1 versus M07754_2.00 (ZNF468); m=144/161; ncol2=12; w=-4; offset=-4; strand=D; shift=4; score=0.433026; ----CrCCCCCTCCCh--- ; cor=; Ncor= a 0 0 0 0 16.3043 42.6812 0.942029 0.0724638 0.0724638 0.0724638 0.0724638 2.97101 0.0724638 0.942029 0.942029 25.8696 0 0 0 c 0 0 0 0 77.7536 0.942029 84.7101 98.913 88.4783 99.7826 99.4928 0.0724638 99.7826 98.3333 93.4058 30.7971 0 0 0 g 0 0 0 0 2.10145 46.1594 9.92754 0.362319 0.0724638 0.0724638 0.0724638 0.652174 0.0724638 0.362319 0.942029 8.76812 0 0 0 t 0 0 0 0 3.84058 10.2174 4.42029 0.652174 11.3768 0.0724638 0.362319 96.3043 0.0724638 0.362319 4.71014 34.5652 0 0 0

M08021_2.00_shift5 (M08021_2.00)
; positions_7nt_m1 versus M08021_2.00; m=145/161; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.431135; -----rrCCmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 27.5748 27.2425 4.6512 3.6545 45.515 0 52.4917 0 0 0 39.5349 0 0 0 c 0 0 0 0 0 21.2625 6.9767 87.3754 86.7109 49.5017 100 0 100 100 98.6711 19.6013 0 0 0 g 0 0 0 0 0 39.5349 56.1462 2.3256 0 0.996699 0 36.8771 0 0 0 2.6578 0 0 0 t 0 0 0 0 0 11.6279 9.6346 5.6478 9.63459 3.9867 0 10.6312 0 0 1.3289 38.206 0 0 0

M09505_2.00_shift7 (MAZ)
; positions_7nt_m1 versus M09505_2.00 (MAZ); m=146/161; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score=0.42886; -------CCCCcCCC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.1 0.1 0.1 0.1 5.4 8.4 0.1 0.1 0 0 0 0 c 0 0 0 0 0 0 0 99.7 95.6 89.4 84.8 60.7 70.2 99.7 98.9 0 0 0 0 g 0 0 0 0 0 0 0 0.1 0.1 5.8 6.1 14.9 8.2 0.1 0.1 0 0 0 0 t 0 0 0 0 0 0 0 0.1 4.2 4.7 9 19 13.2 0.1 0.9 0 0 0 0

M04469_2.00_shift4 (ZNF740)
; positions_7nt_m1 versus M04469_2.00 (ZNF740); m=147/161; ncol2=13; w=-4; offset=-4; strand=D; shift=4; score=0.425143; ----cyrCCCCCCCCAc-- ; cor=; Ncor= a 0 0 0 0 17.6303 12.5679 29.8318 4.99584 9.32203 1.64684 2.00182 2.10623 0.927644 0.188147 9.74576 70.5214 13.2522 0 0 c 0 0 0 0 47.5829 52.5213 14.0747 87.8435 89.4068 96.5233 95.9964 96.6117 97.8664 99.2474 89.4068 15.9759 67.5416 0 0 g 0 0 0 0 17.2512 5.58573 43.2909 3.08077 1.18644 0.365965 0.636943 0.274725 0.649351 0.28222 0.508475 4.54545 3.45711 0 0 t 0 0 0 0 17.5355 29.3251 12.8026 4.07993 0.0847458 1.46386 1.36488 1.00733 0.556586 0.28222 0.338983 8.95722 15.749 0 0

M07929_2.00_shift0 (EGR1)
; positions_7nt_m1 versus M07929_2.00 (EGR1); m=148/161; ncol2=20; w=-8; offset=-8; strand=D; shift=0; score=0.422794; ccsccssccCCGCCCmCGC ; cor=; Ncor= a 13.9394 15.1515 12.7273 16.9697 17.1717 18.1818 10.101 16.9697 13.5354 18.3838 0.404 19.798 0 0 0 51.5151 0 7.0707 0 c 46.2626 45.6566 46.0606 44.2424 48.2828 35.5556 48.8889 44.4444 40 73.9394 97.9798 0 100 99.798 95.1515 47.6768 99.798 0.6061 90.3031 g 24.4444 22.6263 25.6566 23.0303 17.7778 29.4949 25.0505 18.7879 21.6162 0.8081 0 69.6969 0 0.202 0 0.808099 0.202 80.202 4.2424 t 15.3535 16.5657 15.5556 15.7576 16.7677 16.7677 15.9596 19.798 24.8485 6.8687 1.6162 10.5051 0 0 4.8485 0 0 12.1212 5.45451

M04464_2.00_shift5 (KLF4)
; positions_7nt_m1 versus M04464_2.00 (KLF4); m=149/161; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.421753; -----crCCmCrCCCa--- ; cor=; Ncor= a 0 0 0 0 0 16.7449 31.7536 4.96811 6.89314 53.6107 0 33.5846 0 1.09954 0 38.0943 0 0 0 c 0 0 0 0 0 43.525 22.8541 85.8006 84.3008 38.4297 96.0541 0 99.7269 98.6111 96.1806 22.9896 0 0 0 g 0 0 0 0 0 18.0164 35.545 3.12185 4.86478 4.50207 0.244269 61.163 0 0.270062 0.865475 15.0068 0 0 0 t 0 0 0 0 0 21.7136 9.84729 6.10943 3.94129 3.45759 3.70162 5.25245 0.273117 0.0192901 2.9539 23.9092 0 0 0

M04470_2.00_shift4 (ZNF740)
; positions_7nt_m1 versus M04470_2.00 (ZNF740); m=150/161; ncol2=13; w=-4; offset=-4; strand=D; shift=4; score=0.42148; ----cygCCCCCCCCaC-- ; cor=; Ncor= a 0 0 0 0 15.541 8.9477 24.4419 2.9212 3.81944 0.361011 0.433839 0.433526 0.21692 0 4.37731 67.2363 7.04148 0 0 c 0 0 0 0 48.2934 47.385 14.4533 93.5462 95.625 99.4224 99.5662 99.4942 99.5662 100 84.8952 14.2578 75.1638 0 0 g 0 0 0 0 16.7756 4.34783 52.0999 1.97011 0 0 0 0.0722543 0 0 9.98767 11.2793 1.74672 0 0 t 0 0 0 0 19.39 39.3195 9.00492 1.5625 0.555556 0.216606 0 0 0.21692 0 0.739827 7.22656 16.048 0 0

M08937_2.00_shift1 (WT1)
; positions_7nt_m1 versus M08937_2.00 (WT1); m=151/161; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.41932; -CycCycCyCCTCCYyCbC ; cor=; Ncor= a 0 2.6 5 3.8 6 9.2 5.6 1.2 3.8 4.4 1 2.2 0 1.2 0.8 6.2 1.4 14.6 3.8 c 0 68 47.2 67.4 75.2 38.8 51.6 71.4 38.6 90.8 97 0.4 97.2 95.6 71.4 59.6 80.4 27.6 76.2 g 0 8 10.8 9.4 6.8 21.4 18.6 3.6 10 1.2 0.8 14.8 1.6 2.6 2.6 5.2 8.4 30.4 11.2 t 0 21.4 37 19.4 12 30.6 24.2 23.8 47.6 3.6 1.2 82.6 1.2 0.6 25.2 29 9.8 27.4 8.8

M08968_2.00_shift1 (M08968_2.00)
; positions_7nt_m1 versus M08968_2.00; m=152/161; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.41932; -CycCycCyCCTCCYyCbC ; cor=; Ncor= a 0 2.6 5 3.8 6 9.2 5.6 1.2 3.8 4.4 1 2.2 0 1.2 0.8 6.2 1.4 14.6 3.8 c 0 68 47.2 67.4 75.2 38.8 51.6 71.4 38.6 90.8 97 0.4 97.2 95.6 71.4 59.6 80.4 27.6 76.2 g 0 8 10.8 9.4 6.8 21.4 18.6 3.6 10 1.2 0.8 14.8 1.6 2.6 2.6 5.2 8.4 30.4 11.2 t 0 21.4 37 19.4 12 30.6 24.2 23.8 47.6 3.6 1.2 82.6 1.2 0.6 25.2 29 9.8 27.4 8.8

M08967_2.00_shift4 (M08967_2.00)
; positions_7nt_m1 versus M08967_2.00; m=153/161; ncol2=19; w=-4; offset=-4; strand=D; shift=4; score=0.418081; ----cckCCCCkCCCCCwc ; cor=; Ncor= a 0 0 0 0 7.6 9 7.2 0.8 3.4 1.2 2.8 6 0.2 1.8 3.4 5.2 2.4 32.2 9 c 0 0 0 0 58.2 53.2 12.8 87 82.2 93.2 84.4 1.2 98 88.4 77.6 81.8 90.2 15.8 67.4 g 0 0 0 0 21 14.4 44.2 4.4 0.4 1.6 0.6 29.2 0.4 1.4 2.8 5.2 3 22 15.2 t 0 0 0 0 13.2 23.4 35.8 7.8 14 4 12.2 63.6 1.4 8.4 16.2 7.8 4.4 30 8.4

M04455_2.00_shift5 (KLF2)
; positions_7nt_m1 versus M04455_2.00 (KLF2); m=154/161; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.417807; -----srCCmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 22.804 40.76 11.9439 7.29676 56.6352 0 33.6164 0 2.58377 1.29796 39.7663 0 0 0 c 0 0 0 0 0 29.7707 17.9117 74.5003 83.6864 27.754 98.3404 5.41181 98.4871 93.2983 88.2229 24.7079 0 0 0 g 0 0 0 0 0 28.5591 34.2968 7.97872 3.36773 12.9886 0 57.6733 1.04411 3.93621 2.0042 8.41627 0 0 0 t 0 0 0 0 0 18.8663 7.0315 5.57705 5.6491 2.62223 1.65957 3.29844 0.468783 0.181671 8.4749 27.1095 0 0 0

M00142_2.00_shift7 (ZNF691)
; positions_7nt_m1 versus M00142_2.00 (ZNF691); m=155/161; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score=0.416271; -------GTrCTCmy---- ; cor=; Ncor= a 0 0 0 0 0 0 0 4.12103 1.98931 34.2822 1.89551 0.0094304 0.0094304 26.7434 10.01 0 0 0 0 c 0 0 0 0 0 0 0 1.3828 0.00989707 0.961538 97.1426 1.89551 98.0856 52.3129 28.3311 0 0 0 0 g 0 0 0 0 0 0 0 89.006 18.8143 64.7468 0.0094304 0.952471 0.0094304 12.7964 10.01 0 0 0 0 t 0 0 0 0 0 0 0 5.49014 79.1865 0 0.952471 97.1426 1.89551 8.14737 51.6489 0 0 0 0

M08099_2.00_shift5 (M08099_2.00)
; positions_7nt_m1 versus M08099_2.00; m=156/161; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.41422; -----rrCCACACCCw--- ; cor=; Ncor= a 0 0 0 0 0 28.5171 31.749 12.7376 2.47148 76.8061 0 76.0456 0 0 0 53.2319 0 0 0 c 0 0 0 0 0 14.4487 7.60456 75.2852 87.6426 22.4335 100 0 100 100 96.5779 6.65399 0 0 0 g 0 0 0 0 0 38.403 57.9848 6.08365 0 0 0 18.4411 0 0 0 0 0 0 0 t 0 0 0 0 0 18.6312 2.6616 5.89354 9.88593 0.760456 0 5.51331 0 0 3.42205 40.1141 0 0 0

M06170_2.00_shift5 (M06170_2.00)
; positions_7nt_m1 versus M06170_2.00; m=157/161; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.412314; -----rrCCACrCCCa--- ; cor=; Ncor= a 0 0 0 0 0 29.3362 38.3282 10.202 8.68687 76.7677 2.72727 33.0303 3.13131 3.13131 2.42669 50.1523 0 0 0 c 0 0 0 0 0 13.4904 2.95617 78.8889 82.6263 21.4141 97.0707 0 96.8687 96.6667 93.1244 20.3046 0 0 0 g 0 0 0 0 0 45.5032 51.2742 4.54545 1.81818 1.51515 0 65.0505 0 0 0 5.27919 0 0 0 t 0 0 0 0 0 11.6702 7.44139 6.36364 6.86869 0.30303 0.20202 1.91919 0 0.20202 4.44894 24.264 0 0 0

M04463_2.00_shift5 (KLF4)
; positions_7nt_m1 versus M04463_2.00 (KLF4); m=158/161; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.412283; -----srCCACrCCCh--- ; cor=; Ncor= a 0 0 0 0 0 19.0879 35.9409 12.4731 12.5032 70.7975 0.981144 36.0936 0 3.2263 0.720669 41.0845 0 0 0 c 0 0 0 0 0 35.5446 22.9869 71.0434 80.0077 19.148 96.1367 0.575309 99.5713 95.8869 90.3863 26.7783 0 0 0 g 0 0 0 0 0 27.6351 32.6696 8.50799 3.61061 6.79862 0 59.1436 0 0.366972 2.23407 6.79426 0 0 0 t 0 0 0 0 0 17.7324 8.40263 7.97553 3.87854 3.25588 2.88211 4.18749 0.428708 0.519878 6.65898 25.3429 0 0 0

M07927_2.00_shift1 (EGR1)
; positions_7nt_m1 versus M07927_2.00 (EGR1); m=159/161; ncol2=20; w=-7; offset=-7; strand=D; shift=1; score=0.408082; -ccscscccCCGCCCmCGC ; cor=; Ncor= a 0 13.0705 16.1826 11.6183 17.0124 13.9004 13.0705 12.6556 12.0332 15.7676 1.0373 19.2946 0 0 0 43.5685 0 5.6017 0 c 0 48.1328 49.5851 44.1909 45.8506 38.1743 49.7925 47.3029 41.0788 76.3486 97.5104 0 100 100 94.6058 56.0166 100 0 92.1162 g 0 22.6141 22.8216 25.1037 18.4647 30.7054 20.5394 17.4274 21.9917 2.4896 0.2075 71.5768 0 0 0 0.4149 0 85.6846 4.3568 t 0 16.1826 11.4108 19.0871 18.6722 17.2199 16.5975 22.6141 24.8963 5.39421 1.2448 9.1286 0 0 5.3942 0 0 8.7137 3.527

M04456_2.00_shift5 (KLF2)
; positions_7nt_m1 versus M04456_2.00 (KLF2); m=160/161; ncol2=11; w=-3; offset=-3; strand=D; shift=5; score=0.405249; -----srCCmCrCCCm--- ; cor=; Ncor= a 0 0 0 0 0 21.2044 38.0149 6.81334 0.934809 48.188 0 37.9653 0 1.70501 0 31.1281 0 0 0 c 0 0 0 0 0 34.4925 19.6371 83.6764 87.0111 42.1117 100 1.9024 99.2424 95.724 90.5994 30.393 0 0 0 g 0 0 0 0 0 26.4348 37.46 6.52945 10.9717 6.82561 0 59.5533 0.701459 2.24628 3.61168 17.7269 0 0 0 t 0 0 0 0 0 17.8682 4.88794 2.98084 1.08241 2.87466 0 0.578991 0.0561167 0.324763 5.78893 20.752 0 0 0

M07709_2.00_shift6 (ZKSCAN5)
; positions_7nt_m1 versus M07709_2.00 (ZKSCAN5); m=161/161; ncol2=9; w=-2; offset=-2; strand=D; shift=6; score=0.400979; ------TCACCTCCy---- ; cor=; Ncor= a 0 0 0 0 0 0 0.0739645 0.0739645 87.0562 6.28698 0.0739645 0.0739645 0.0739645 3.3284 13.9792 0 0 0 0 c 0 0 0 0 0 0 0.0739645 98.003 0.0739645 93.5651 90.6065 0.0739645 99.7781 88.2396 32.9142 0 0 0 0 g 0 0 0 0 0 0 0.0739645 0.0739645 5.99112 0.0739645 0.0739645 0.0739645 0.0739645 0.0739645 12.796 0 0 0 0 t 0 0 0 0 0 0 99.7781 1.84911 6.8787 0.0739645 9.24556 99.7781 0.0739645 8.35799 40.3107 0 0 0 0

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv5_m5_shift3 ; 32 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv5_m5_shift3 (oligos_7nt_mkv5_m5)
; oligos_7nt_mkv5_m5; m=0 (reference); ncol1=12; shift=3; ncol=15; ---ssCGCCTGCGss ; Alignment reference a 0 0 0 1597 1425 401 287 157 261 363 104 262 374 1481 1652 c 0 0 0 4045 4144 9963 544 10297 10359 1094 790 9872 787 4537 4102 g 0 0 0 3786 4240 639 10070 699 589 646 10269 928 9719 3632 3885 t 0 0 0 1922 1541 347 449 197 141 9247 187 288 470 1700 1711

M08177_2.00_shift4 (NRF1)
; oligos_7nt_mkv5_m5 versus M08177_2.00 (NRF1); m=1/31; ncol2=11; w=0; offset=1; strand=D; shift=4; score=0.792067; ----GCGCmTGCGCr ; cor=; Ncor= a 0 0 0 0 13.019 13.4732 4.23875 0 32.7422 0 0 0 0 1.60035 48.551 c 0 0 0 0 8.10986 86.5268 4.08737 86.8512 40.2682 8.7154 0 93.8149 7.54758 98.3997 17.3875 g 0 0 0 0 78.8711 0 91.6739 10.1211 20.2206 11.4187 100 0 92.4524 0 34.0614 t 0 0 0 0 0 0 0 3.02768 6.76903 79.8659 0 6.18512 0 0 0

M03580_2.00_rc_shift3 (NRF1_rc)
; oligos_7nt_mkv5_m5 versus M03580_2.00_rc (NRF1_rc); m=2/31; ncol2=12; w=0; offset=0; strand=R; shift=3; score=0.758947; ---tGCGCATGCGYr ; cor=; Ncor= a 0 0 0 20.7347 18.7286 2.17835 1.66205 0.070497 93.7728 0.676133 0.0352983 0.137979 0.0695169 0 62.3533 c 0 0 0 15.7542 0.342075 96.3581 0.138504 99.7885 1.52368 2.16362 0 97.6544 0.312826 74.0324 0.89717 g 0 0 0 17.5556 80.7013 1.36147 98.0263 0.140994 4.00795 1.45368 99.9294 0.172473 98.4011 0.156904 35.3347 t 0 0 0 45.9555 0.22805 0.10211 0.17313 0 0.695595 95.7066 0.0352983 2.03518 1.21655 25.8107 1.41477

M04574_2.00_rc_shift2 (ZNF454_rc)
; oligos_7nt_mkv5_m5 versus M04574_2.00_rc (ZNF454_rc); m=3/31; ncol2=14; w=-1; offset=-1; strand=R; shift=2; score=0.676226; --wrGCGCCGGCGCy ; cor=; Ncor= a 0 0 29.3251 39.8857 17.9036 1.28913 0.265745 0.0534045 1.75026 1.22396 0.213789 0.0534045 0.924703 0.571429 1.58359 c 0 0 16.1489 2.16203 0.607639 98.211 0.239171 99.6796 97.5183 0.0520833 0 99.6796 0.184941 82.044 56.594 g 0 0 20.0589 52.8827 81.0113 0.131544 99.2028 0.133511 0.0261233 97.2135 99.7595 0.186916 98.6262 0.747253 1.50571 t 0 0 34.4671 5.06958 0.477431 0.368324 0.29232 0.133511 0.705329 1.51042 0.0267237 0.0801068 0.264201 16.6374 40.3167

M04572_2.00_shift2 (ZNF454)
; oligos_7nt_mkv5_m5 versus M04572_2.00 (ZNF454); m=4/31; ncol2=14; w=-1; offset=-1; strand=D; shift=2; score=0.669572; --TrGCGCCGGCGCy ; cor=; Ncor= a 0 0 11.0982 37.4973 11.7952 0.235243 0 0 0 0.137024 0.0438813 0.0877482 0.0491079 0 2.42546 c 0 0 4.19829 0.385618 0.0338803 99.6608 0.0603467 99.9945 99.9232 0.0164429 0.032911 99.9068 0.0873029 87.7378 65.4292 g 0 0 6.58262 61.4436 88.171 0.0711199 99.9397 0.00548908 0.032911 99.8465 99.9232 0.00548426 99.3998 0.414198 1.09622 t 0 0 78.1208 0.673474 0 0.0328246 0 0 0.0438813 0 0 0 0.463797 11.848 31.0491

M09655_2.00_rc_shift2 (NRF1_rc)
; oligos_7nt_mkv5_m5 versus M09655_2.00_rc (NRF1_rc); m=5/31; ncol2=12; w=-1; offset=-1; strand=R; shift=2; score=0.664847; --ctGCGCATGCGC- ; cor=; Ncor= a 0 0 7.8 5.2 3.6 4 1.7 0.5 73.4 4.1 0.5 1.1 0.8 0.6 0 c 0 0 62.8 17 0.6 93.6 0.4 98.3 16.8 7.7 1.3 95.9 2 92.8 0 g 0 0 19.7 10.6 95.5 1.8 97.6 0.7 6.8 16.7 97.5 0.4 92.2 0.9 0 t 0 0 9.8 67.3 0.3 0.6 0.3 0.6 3.1 71.5 0.7 2.6 5 5.7 0

M08080_2.00_shift3 (ZEB1)
; oligos_7nt_mkv5_m5 versus M08080_2.00 (ZEB1); m=6/31; ncol2=11; w=0; offset=0; strand=D; shift=3; score=0.662006; ---ssCACCTGsss- ; cor=; Ncor= a 0 0 0 15.9521 23.2749 0.566347 98.8872 0.158975 0.958816 0.0198718 2.19087 9.84649 21.1536 17.3382 0 c 0 0 0 39.7337 27.5722 95.3599 0 98.753 95.6679 2.48895 0.884296 47.4986 30.389 34.5521 0 g 0 0 0 25.9725 25.729 0.784937 1.10785 0.481892 3.2242 1.76362 96.284 25.7241 32.7935 28.9533 0 t 0 0 0 18.3417 23.4239 3.28879 0 0.606091 0.149039 95.7276 0.640866 16.9308 15.664 19.1564 0

M05963_2.00_shift5 (M05963_2.00)
; oligos_7nt_mkv5_m5 versus M05963_2.00; m=7/31; ncol2=10; w=0; offset=2; strand=D; shift=5; score=0.595244; -----CACCTGmdCC ; cor=; Ncor= a 0 0 0 0 0 0 100 0 0 0 0 33.3333 25 8.33333 9.09091 c 0 0 0 0 0 100 0 100 100 0 0 66.6667 8.33333 83.3333 72.7273 g 0 0 0 0 0 0 0 0 0 0 100 0 33.3333 0 9.09091 t 0 0 0 0 0 0 0 0 0 100 0 0 33.3333 8.33333 9.09091

M08284_2.00_shift2 (ZNF213)
; oligos_7nt_mkv5_m5 versus M08284_2.00 (ZNF213); m=8/31; ncol2=15; w=-1; offset=-1; strand=D; shift=2; score=0.562575; --CgCCGCCygmkkT ; cor=; Ncor= a 0 0 0.868726 0.0965251 2.41313 13.2239 1.25483 2.41313 0.0965251 1.25483 12.8378 39.8649 0.868726 0.0965251 0.0965251 c 0 0 91.9884 11.2934 76.5444 68.8224 0.0965251 93.5328 99.3243 36.39 12.0656 32.529 12.4517 2.41313 4.72973 g 0 0 1.25483 66.8919 16.6988 3.95753 96.2355 3.57143 0.0965251 4.72973 66.8919 22.8764 50.6757 32.9151 0.482625 t 0 0 5.88803 21.7181 4.34363 13.9961 2.41313 0.482625 0.482625 57.6255 8.20463 4.72973 36.0039 64.5753 94.6911

M09751_2.00_shift6 (TFAP2C,TFAP2D)
; oligos_7nt_mkv5_m5 versus M09751_2.00 (TFAP2C,TFAP2D); m=9/31; ncol2=9; w=0; offset=3; strand=D; shift=6; score=0.557429; ------GCCysrgGs ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 2.73973 9.58904 31.5068 19.1781 8.21918 7.53425 c 0 0 0 0 0 0 0 100 100 44.5205 31.5068 23.9726 8.90411 6.16438 38.3562 g 0 0 0 0 0 0 100 0 0 21.2329 39.726 39.0411 63.6986 79.4521 43.1507 t 0 0 0 0 0 0 0 0 0 31.5068 19.1781 5.47945 8.21918 6.16438 10.9589

M09443_2.00_shift1 (NRF1)
; oligos_7nt_mkv5_m5 versus M09443_2.00 (NRF1); m=10/31; ncol2=17; w=-2; offset=-2; strand=D; shift=1; score=0.544426; -syyGCGCATGCGCA ; cor=; Ncor= a 0 6.8 20.2 6.4 17.8 9.2 7 0.6 72 3.2 0.4 0.2 0 0 79.8 c 0 52.2 37.8 31.6 1.4 86.6 0.2 97.6 16.4 4.8 0.2 98.8 0.4 90.8 4.6 g 0 29.6 14 19.4 80 4.2 91.4 1 7.6 13.8 99.2 0 96.8 0.2 10 t 0 11.4 28 42.6 0.8 0 1.4 0.8 4 78.2 0.2 1 2.8 9 5.6

M09755_2.00_shift6 (TFAP2A,TFAP2D)
; oligos_7nt_mkv5_m5 versus M09755_2.00 (TFAP2A,TFAP2D); m=11/31; ncol2=9; w=0; offset=3; strand=D; shift=6; score=0.529655; ------GCCcbrrGs ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 11.8919 10.2703 29.7297 28.6486 10.2703 4.86486 c 0 0 0 0 0 0 0 100 100 38.3784 30.8108 23.7838 16.2162 8.64865 42.1622 g 0 0 0 0 0 0 100 0 0 24.8649 32.973 36.2162 49.1892 74.0541 42.7027 t 0 0 0 0 0 0 0 0 0 24.8649 25.9459 10.2703 5.94595 7.02703 10.2703

M08701_2.00_shift6 (TFAP2B,TFAP2D)
; oligos_7nt_mkv5_m5 versus M08701_2.00 (TFAP2B,TFAP2D); m=12/31; ncol2=10; w=0; offset=3; strand=D; shift=6; score=0.508802; ------GcCyGvGGg ; cor=; Ncor= a 0 0 0 0 0 0 3.95257 0 0 11.4625 7.50988 32.8063 7.11462 0 19.0711 c 0 0 0 0 0 0 0 64.8221 96.4427 57.3123 3.55731 31.6206 3.55731 0 12.3518 g 0 0 0 0 0 0 78.2609 24.5059 0 0 88.9328 35.5731 85.3755 100 67.6877 t 0 0 0 0 0 0 17.7866 10.6719 3.55731 31.2253 0 0 3.95257 0 0.889328

M08705_2.00_shift6 (TFAP2D)
; oligos_7nt_mkv5_m5 versus M08705_2.00 (TFAP2D); m=13/31; ncol2=10; w=0; offset=3; strand=D; shift=6; score=0.508802; ------GcCyGvGGg ; cor=; Ncor= a 0 0 0 0 0 0 3.95257 0 0 11.4625 7.50988 32.8063 7.11462 0 19.0711 c 0 0 0 0 0 0 0 64.8221 96.4427 57.3123 3.55731 31.6206 3.55731 0 12.3518 g 0 0 0 0 0 0 78.2609 24.5059 0 0 88.9328 35.5731 85.3755 100 67.6877 t 0 0 0 0 0 0 17.7866 10.6719 3.55731 31.2253 0 0 3.95257 0 0.889328

M04214_2.00_shift4 (TCF4)
; oligos_7nt_mkv5_m5 versus M04214_2.00 (TCF4); m=14/31; ncol2=8; w=0; offset=1; strand=D; shift=4; score=0.495741; ----vCACCTGc--- ; cor=; Ncor= a 0 0 0 0 29.154 0 100 0 0.934488 0 0 9.01677 0 0 0 c 0 0 0 0 27.7783 100 0 91.5555 81.8618 0 0 52.9805 0 0 0 g 0 0 0 0 34.7188 0 0 2.55795 17.2037 0 100 13.9395 0 0 0 t 0 0 0 0 8.34889 0 0 5.88659 0 100 0 24.0633 0 0 0

M02541_2.00_shift7 (M02541_2.00)
; oligos_7nt_mkv5_m5 versus M02541_2.00; m=15/31; ncol2=8; w=0; offset=4; strand=D; shift=7; score=0.483533; -------CCCGCGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 c 0 0 0 0 0 0 0 97.1154 97.1154 97.1154 0.961538 97.1154 0.961538 0.961538 0.961538 g 0 0 0 0 0 0 0 0.961538 0.961538 0.961538 97.1154 0.961538 97.1154 97.1154 97.1154 t 0 0 0 0 0 0 0 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538

M07842_2.00_shift3 (ZEB1)
; oligos_7nt_mkv5_m5 versus M07842_2.00 (ZEB1); m=16/31; ncol2=8; w=0; offset=0; strand=D; shift=3; score=0.481572; ---ctCACCTG---- ; cor=; Ncor= a 0 0 0 2.6608 21.5078 0 100 0 0 0 0 0 0 0 0 c 0 0 0 67.4057 14.6341 79.6009 0 100 100 0 0 0 0 0 0 g 0 0 0 11.7517 18.847 0 0 0 0 0 97.7827 0 0 0 0 t 0 0 0 18.1818 45.0111 20.3991 0 0 0 100 2.2173 0 0 0 0

M04215_2.00_shift4 (TCF4)
; oligos_7nt_mkv5_m5 versus M04215_2.00 (TCF4); m=17/31; ncol2=8; w=0; offset=1; strand=D; shift=4; score=0.479546; ----rCACCTGy--- ; cor=; Ncor= a 0 0 0 0 30.0915 0 100 0 5.10355 0 0 13.383 0 0 0 c 0 0 0 0 23.7516 100 0 73.952 93.1711 0 0 42.5557 0 0 0 g 0 0 0 0 35.0603 0 0 7.7096 1.72533 0 100 18.4861 0 0 0 t 0 0 0 0 11.0966 0 0 18.3384 0 100 0 25.5751 0 0 0

M09002_2.00_shift4 (M09002_2.00)
; oligos_7nt_mkv5_m5 versus M09002_2.00; m=18/31; ncol2=8; w=0; offset=1; strand=D; shift=4; score=0.475249; ----mCACCTGs--- ; cor=; Ncor= a 0 0 0 0 26.7857 0 100 0 0 0 0 5.35714 0 0 0 c 0 0 0 0 48.2143 100 0 100 100 0 0 26.7857 0 0 0 g 0 0 0 0 19.6429 0 0 0 0 0 100 48.2143 0 0 0 t 0 0 0 0 5.35714 0 0 0 0 100 0 19.6429 0 0 0

M08886_2.00_shift4 (SNAI1)
; oligos_7nt_mkv5_m5 versus M08886_2.00 (SNAI1); m=19/31; ncol2=8; w=0; offset=1; strand=D; shift=4; score=0.475249; ----mCACCTGs--- ; cor=; Ncor= a 0 0 0 0 26.7857 0 100 0 0 0 0 5.35714 0 0 0 c 0 0 0 0 48.2143 100 0 100 100 0 0 26.7857 0 0 0 g 0 0 0 0 19.6429 0 0 0 0 0 100 48.2143 0 0 0 t 0 0 0 0 5.35714 0 0 0 0 100 0 19.6429 0 0 0

M04138_2.00_shift4 (TCF12)
; oligos_7nt_mkv5_m5 versus M04138_2.00 (TCF12); m=20/31; ncol2=8; w=0; offset=1; strand=D; shift=4; score=0.471725; ----rCAYCTGc--- ; cor=; Ncor= a 0 0 0 0 32.2515 0 100 0 10.2248 0 0 14.8553 0 0 0 c 0 0 0 0 21.365 100 0 69.2663 85.2456 0 0 46.9028 0 0 0 g 0 0 0 0 29.7478 0 0 5.17795 4.52956 0 96.4746 14.6699 0 0 0 t 0 0 0 0 16.6358 0 0 25.5557 0 100 3.52541 23.572 0 0 0

M04137_2.00_shift4 (TCF12)
; oligos_7nt_mkv5_m5 versus M04137_2.00 (TCF12); m=21/31; ncol2=8; w=0; offset=1; strand=D; shift=4; score=0.469405; ----vCACsTGc--- ; cor=; Ncor= a 0 0 0 0 29.7668 0 100 0 4.49454 0 0 11.7992 0 0 0 c 0 0 0 0 25.5185 100 0 79.0301 62.6366 0 0 51.5589 0 0 0 g 0 0 0 0 33.4859 0 0 6.04793 32.8689 0 97.7352 14.1447 0 0 0 t 0 0 0 0 11.2287 0 0 14.922 0 100 2.26478 22.4971 0 0 0

M09017_2.00_rc_shift0 (ZFY_rc)
; oligos_7nt_mkv5_m5 versus M09017_2.00_rc (ZFY_rc); m=22/31; ncol2=19; w=-3; offset=-3; strand=R; shift=0; score=0.461709; gsCsvGGCCTgsgss ; cor=; Ncor= a 22.5735 2.17378 1.28652 6.4326 38.8206 2.48432 0 0 0 0.177451 14.6397 17.7926 14.6841 16.7723 9.71545 c 12.3225 49.7307 77.863 29.9924 26.6177 8.83133 0.532353 99.8225 99.2902 0.177451 19.9633 33.9819 23.5566 34.0263 51.334 g 52.4265 34.2512 0.754167 40.9944 32.6098 88.5069 99.4676 0.177451 0.354902 0.354902 58.2103 39.2642 47.0752 37.3566 27.9929 t 12.6775 13.8443 20.0963 22.5807 1.95196 0.177451 0 0 0.354902 99.2902 7.18677 8.96128 14.6841 11.8449 10.9576

M02728_2.00_shift4 (TCF4)
; oligos_7nt_mkv5_m5 versus M02728_2.00 (TCF4); m=23/31; ncol2=7; w=0; offset=1; strand=D; shift=4; score= 0.4378; ----rCACCTG---- ; cor=; Ncor= a 0 0 0 0 39.5382 0.537313 97.5338 0 0.688863 0.651273 1.23675 0 0 0 0 c 0 0 0 0 9.66811 99.1642 1.1744 88.6339 95.3502 0.769686 0.294464 0 0 0 0 g 0 0 0 0 47.9365 0 0.998238 8.96478 3.90356 0.236827 97.821 0 0 0 0 t 0 0 0 0 2.85714 0.298507 0.2936 2.40128 0.0574053 98.3422 0.647821 0 0 0 0

M01965_2.00_rc_shift2 (M01965_2.00_rc)
; oligos_7nt_mkv5_m5 versus M01965_2.00_rc; m=24/31; ncol2=9; w=-1; offset=-1; strand=R; shift=2; score=0.437441; --rssCGCcmw---- ; cor=; Ncor= a 0 0 26.6951 17.0249 0.941705 0 1.40615 0 8.43249 41.9828 34.1094 0 0 0 0 c 0 0 23.9143 53.2328 33.1134 99.9041 0.00148976 86.4773 55.2624 27.3102 20.8963 0 0 0 0 g 0 0 36.3967 28.0692 64.7113 0.00126108 98.579 11.587 24.0971 13.2933 15.636 0 0 0 0 t 0 0 12.9939 1.67309 1.2336 0.0866577 0.0133113 1.93456 12.208 17.4137 29.3583 0 0 0 0

M09521_2.00_rc_shift1 (E2F1_rc)
; oligos_7nt_mkv5_m5 versus M09521_2.00_rc (E2F1_rc); m=25/31; ncol2=10; w=-2; offset=-2; strand=R; shift=1; score=0.432736; -TTCCCGCCwg---- ; cor=; Ncor= a 0 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 37.7 14.1 0 0 0 0 c 0 4.8 0.2 98.2 91.7 99.5 0.2 99.5 79 21 22.4 0 0 0 0 g 0 0.2 0.2 1.5 8 0.2 99.5 0.2 14.7 15.8 42.4 0 0 0 0 t 0 94.9 99.5 0.2 0.2 0.2 0.2 0.2 6.2 25.7 21.3 0 0 0 0

M08767_2.00_shift5 (M08767_2.00)
; oligos_7nt_mkv5_m5 versus M08767_2.00; m=26/31; ncol2=7; w=0; offset=2; strand=D; shift=5; score=0.415684; -----CAsCTGC--- ; cor=; Ncor= a 0 0 0 0 0 0 100 0 0 0 0 3.22581 0 0 0 c 0 0 0 0 0 100 0 43.5484 100 0 0 75.8065 0 0 0 g 0 0 0 0 0 0 0 56.4516 0 0 100 3.22581 0 0 0 t 0 0 0 0 0 0 0 0 0 100 0 17.7419 0 0 0

M08717_2.00_shift5 (MYF6)
; oligos_7nt_mkv5_m5 versus M08717_2.00 (MYF6); m=27/31; ncol2=7; w=0; offset=2; strand=D; shift=5; score=0.415684; -----CAsCTGC--- ; cor=; Ncor= a 0 0 0 0 0 0 100 0 0 0 0 3.22581 0 0 0 c 0 0 0 0 0 100 0 43.5484 100 0 0 75.8065 0 0 0 g 0 0 0 0 0 0 0 56.4516 0 0 100 3.22581 0 0 0 t 0 0 0 0 0 0 0 0 0 100 0 17.7419 0 0 0

M07721_2.00_shift8 (ZNF786)
; oligos_7nt_mkv5_m5 versus M07721_2.00 (ZNF786); m=28/31; ncol2=7; w=0; offset=5; strand=D; shift=8; score=0.412016; --------CTGKGrC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 37.5 0 c 0 0 0 0 0 0 0 0 100 0 0 0 0 0 100 g 0 0 0 0 0 0 0 0 0 0 100 75 100 50 0 t 0 0 0 0 0 0 0 0 0 100 0 25 0 12.5 0

M07757_2.00_shift8 (ZNF783)
; oligos_7nt_mkv5_m5 versus M07757_2.00 (ZNF783); m=29/31; ncol2=8; w=0; offset=5; strand=D; shift=8; score=0.409498; --------CsGCGkC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 100 46.7811 0 100 0 0 100 g 0 0 0 0 0 0 0 0 0 42.9185 100 0 100 50 0 t 0 0 0 0 0 0 0 0 0 10.3004 0 0 0 50 0

M01969_2.00_shift1 (M01969_2.00)
; oligos_7nt_mkv5_m5 versus M01969_2.00; m=30/31; ncol2=10; w=-2; offset=-2; strand=D; shift=1; score=0.406497; -hgsGCGCCaw---- ; cor=; Ncor= a 0 26.9059 22.8056 16.8238 0.0215789 0.0115045 0.0235632 0.0137924 3.58646 45.8029 42.0972 0 0 0 0 c 0 27.7253 11.1007 49.0477 6.84804 99.9812 0.00107217 95.2366 73.4912 13.9342 17.4612 0 0 0 0 g 0 7.18751 55.5345 32.2267 93.1269 0.00371633 99.6766 2.76313 12.148 15.8687 13.3295 0 0 0 0 t 0 38.1813 10.5593 1.90179 0 0 0.298774 1.98648 10.7743 24.3942 27.1121 0 0 0 0

M01967_2.00_rc_shift1 (M01967_2.00_rc)
; oligos_7nt_mkv5_m5 versus M01967_2.00_rc; m=31/31; ncol2=10; w=-2; offset=-2; strand=R; shift=1; score=0.403119; -wscsCGCsaw---- ; cor=; Ncor= a 0 34.7822 24.5367 22.145 0.623559 0 0.0420779 0 3.93797 41.5048 30.6595 0 0 0 0 c 0 17.2723 26.5803 52.858 60.2009 99.9657 0.0049014 83.1039 54.6344 20.8178 20.7583 0 0 0 0 g 0 22.1781 28.7941 23.9894 39.1613 0.000330411 99.6602 16.2825 31.8381 23.0073 18.2277 0 0 0 0 t 0 25.7673 20.0889 1.00764 0.0142313 0.0280106 0.292809 0.612682 9.58946 14.6701 30.3545 0 0 0 0

One-to-n matrix alignment; reference matrix: positions_6nt_m1_shift6 ; 219 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
positions_6nt_m1_shift6 (positions_6nt_m1)
; positions_6nt_m1; m=0 (reference); ncol1=10; shift=6; ncol=16; ------gsAGGTGGgg ; Alignment reference a 0 0 0 0 0 0 1603 1318 8061 8 14 0 71 25 1762 1735 c 0 0 0 0 0 0 1844 2118 68 748 0 2 98 29 1871 1813 g 0 0 0 0 0 0 3577 3681 0 7245 8122 0 7964 7994 3130 3246 t 0 0 0 0 0 0 1116 1023 11 139 4 8138 7 92 1377 1346

M09426_2.00_shift6 (TBX3)
; positions_6nt_m1 versus M09426_2.00 (TBX3); m=1/218; ncol2=11; w=0; offset=0; strand=D; shift=6; score=0.780335; ------rraGGTGgsA ; cor=; Ncor= a 0 0 0 0 0 0 31.9048 38.0952 59.0476 7.38095 1.19048 3.57143 1.66667 10.2381 15.7143 70.2381 c 0 0 0 0 0 0 11.1905 17.1429 0.47619 0 13.3333 0.714286 0 21.9048 26.1905 2.61905 g 0 0 0 0 0 0 35.2381 38.3333 17.381 92.381 84.2857 1.42857 96.9048 43.5714 42.381 20.2381 t 0 0 0 0 0 0 21.6667 6.42857 23.0952 0.238095 1.19048 94.2857 1.42857 24.2857 15.7143 6.90476

M04205_2.00_rc_shift6 (FIGLA_rc)
; positions_6nt_m1 versus M04205_2.00_rc (FIGLA_rc); m=2/218; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.777475; ------vCAGGTGkk- ; cor=; Ncor= a 0 0 0 0 0 0 38.8604 0 100 0 0 0 0 5.42611 22.6781 0 c 0 0 0 0 0 0 30.2691 100 0 0.434947 0.158028 0 0 11.1055 9.87654 0 g 0 0 0 0 0 0 25.2168 0 0 99.5651 99.842 0 100 55.0905 29.1548 0 t 0 0 0 0 0 0 5.65369 0 0 0 0 100 0 28.3779 38.2906 0

M01723_2.00_rc_shift6 (M01723_2.00_rc)
; positions_6nt_m1 versus M01723_2.00_rc; m=3/218; ncol2=10; w=0; offset=0; strand=R; shift=6; score=0.773793; ------sCAGGTGykm ; cor=; Ncor= a 0 0 0 0 0 0 24.3429 6.56145 89.9229 6.41956 17.014 4.88691 6.69592 9.15354 21.8368 26.0006 c 0 0 0 0 0 0 30.638 91.947 3.06165 21.1016 14.644 2.68199 1.12919 31.6311 20.9806 28.7351 g 0 0 0 0 0 0 33.8602 0.853177 3.34997 70.7639 68.3085 0.910793 89.2551 23.9063 25.8833 21.5015 t 0 0 0 0 0 0 11.1589 0.638401 3.66546 1.71489 0.0335082 91.5203 2.91975 35.3091 31.2993 23.7628

M10093_2.00_rc_shift5 (ZEB1_rc)
; positions_6nt_m1 versus M10093_2.00_rc (ZEB1_rc); m=4/218; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.74754; -----ytmAGGTGarw ; cor=; Ncor= a 0 0 0 0 0 12.2449 12 32 100 0 0 3 14 46 34 32 c 0 0 0 0 0 27.551 22 39 0 3 0 0 3 15 7 14 g 0 0 0 0 0 20.4082 12 5 0 97 100 0 83 24 39 22 t 0 0 0 0 0 39.7959 54 24 0 0 0 97 0 15 20 32

M04206_2.00_rc_shift6 (FIGLA_rc)
; positions_6nt_m1 versus M04206_2.00_rc (FIGLA_rc); m=5/218; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.740236; ------mCAGGTGkw- ; cor=; Ncor= a 0 0 0 0 0 0 45.5955 0 99.9646 0 0 0 0 9.41652 26.5214 0 c 0 0 0 0 0 0 41.9372 100 0 0 0 0 0 13.2722 11.3872 0 g 0 0 0 0 0 0 8.94637 0 0 100 100 0 100 43.7372 16.0023 0 t 0 0 0 0 0 0 3.52097 0 0.0354202 0 0 100 0 33.5742 46.0891 0

M09429_2.00_shift7 (M09429_2.00)
; positions_6nt_m1 versus M09429_2.00; m=6/218; ncol2=9; w=0; offset=1; strand=D; shift=7; score=0.734231; -------rrGGTGyka ; cor=; Ncor= a 0 0 0 0 0 0 0 45.614 67.5439 14.0351 0 0 0 1.75439 11.4035 59.6491 c 0 0 0 0 0 0 0 14.9123 0 1.75439 1.75439 0 0.877193 42.9825 24.5614 2.63158 g 0 0 0 0 0 0 0 36.8421 26.3158 83.3333 97.3684 1.75439 99.1228 21.0526 30.7018 23.6842 t 0 0 0 0 0 0 0 2.63158 6.14035 0.877193 0.877193 98.2456 0 34.2105 33.3333 14.0351

M08762_2.00_rc_shift5 (M08762_2.00_rc)
; positions_6nt_m1 versus M08762_2.00_rc; m=7/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.699815; -----rgCAGgTGkg- ; cor=; Ncor= a 0 0 0 0 0 41 15.6 1.6 97.2 0.8 15.2 11.2 4.4 9.6 11.4 0 c 0 0 0 0 0 5.6 17 83.6 0.4 0.4 24 1.4 2.4 6 22 0 g 0 0 0 0 0 35.6 65.6 13.6 1 97.8 59 4.4 90.8 53.6 53 0 t 0 0 0 0 0 17.8 1.8 1.2 1.4 1 1.8 83 2.4 30.8 13.6 0

M08973_2.00_rc_shift5 (M08973_2.00_rc)
; positions_6nt_m1 versus M08973_2.00_rc; m=8/218; ncol2=11; w=-1; offset=-1; strand=R; shift=5; score=0.69965; -----rrCAGGTGcak ; cor=; Ncor= a 0 0 0 0 0 41.2955 47.7733 0 100 0.202429 0.202429 0.202429 0 2.63158 35.6275 11.336 c 0 0 0 0 0 6.68016 0 99.7976 0 0 0 0 0 60.5263 23.8866 21.6599 g 0 0 0 0 0 42.3077 51.6194 0 0 99.7976 99.7976 0 99.5951 15.3846 20.8502 30.5668 t 0 0 0 0 0 9.7166 0.607287 0.202429 0 0 0 99.7976 0.404858 21.4575 19.6356 36.4372

M02808_2.00_rc_shift5 (TCF4_rc)
; positions_6nt_m1 versus M02808_2.00_rc (TCF4_rc); m=9/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.695679; -----wrcAGGTGyd- ; cor=; Ncor= a 0 0 0 0 0 27.2727 31.5047 14.9671 91.7986 7.80488 7.16216 18.5185 0 8.6478 25.5887 0 c 0 0 0 0 0 22.5705 24.7649 52.4671 0 4.7561 6.62162 0.83632 5.83215 31.4465 12.7159 0 g 0 0 0 0 0 19.279 33.3856 24.2599 8.20144 77.8049 86.2162 4.42055 90.7539 19.1824 33.124 0 t 0 0 0 0 0 30.8777 10.3448 8.30592 0 9.63415 0 76.2246 3.41394 40.7233 28.5714 0

M01740_2.00_rc_shift6 (M01740_2.00_rc)
; positions_6nt_m1 versus M01740_2.00_rc; m=10/218; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.692749; ------sCAGrTGyk- ; cor=; Ncor= a 0 0 0 0 0 0 24.5979 5.88129 87.2648 3.20679 25.2322 0.349873 4.82083 9.12452 22.3098 0 c 0 0 0 0 0 0 35.2569 91.9989 4.34466 13.6709 14.2694 2.13788 0.846154 30.2945 22.0878 0 g 0 0 0 0 0 0 30.0439 0.102466 4.21625 77.8878 57.8654 0.0159199 93.0323 24.3119 27.5232 0 t 0 0 0 0 0 0 10.1013 2.01733 4.1743 5.23449 2.63299 97.4963 1.30076 36.2691 28.0792 0

M01750_2.00_shift6 (M01750_2.00)
; positions_6nt_m1 versus M01750_2.00; m=11/218; ncol2=9; w=0; offset=0; strand=D; shift=6; score=0.69176; ------sCAGrTGyk- ; cor=; Ncor= a 0 0 0 0 0 0 24.1036 7.9879 84.8296 2.16183 25.8214 2.64264 2.78341 12.4622 22.3232 0 c 0 0 0 0 0 0 33.5274 88.937 7.619 16.9617 17.3086 3.35945 1.48242 30.9601 24.1825 0 g 0 0 0 0 0 0 30.035 0.876278 4.57517 76.0169 54.6639 1.07442 90.3488 24.3541 27.8165 0 t 0 0 0 0 0 0 12.334 2.19884 2.97619 4.8596 2.20605 92.9235 5.38533 32.2236 25.6778 0

M09002_2.00_rc_shift6 (M09002_2.00_rc)
; positions_6nt_m1 versus M09002_2.00_rc; m=12/218; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.687547; ------sCAGGTGk-- ; cor=; Ncor= a 0 0 0 0 0 0 19.6429 0 100 0 0 0 0 5.35714 0 0 c 0 0 0 0 0 0 48.2143 100 0 0 0 0 0 19.6429 0 0 g 0 0 0 0 0 0 26.7857 0 0 100 100 0 100 48.2143 0 0 t 0 0 0 0 0 0 5.35714 0 0 0 0 100 0 26.7857 0 0

M08886_2.00_rc_shift6 (SNAI1_rc)
; positions_6nt_m1 versus M08886_2.00_rc (SNAI1_rc); m=13/218; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.687547; ------sCAGGTGk-- ; cor=; Ncor= a 0 0 0 0 0 0 19.6429 0 100 0 0 0 0 5.35714 0 0 c 0 0 0 0 0 0 48.2143 100 0 0 0 0 0 19.6429 0 0 g 0 0 0 0 0 0 26.7857 0 0 100 100 0 100 48.2143 0 0 t 0 0 0 0 0 0 5.35714 0 0 0 0 100 0 26.7857 0 0

M01737_2.00_rc_shift6 (M01737_2.00_rc)
; positions_6nt_m1 versus M01737_2.00_rc; m=14/218; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.667571; ------mCAssTGkw- ; cor=; Ncor= a 0 0 0 0 0 0 25.0583 1.33844 91.7989 0.838996 4.61796 0.116677 5.98283 17.648 27.2826 0 c 0 0 0 0 0 0 38.1378 98.6426 3.31879 39.8232 31.4989 2.20704 1.40339 21.7719 16.714 0 g 0 0 0 0 0 0 19.3213 0.0150181 4.01325 57.0798 62.7999 0.00063091 88.1371 30.8958 20.6197 0 t 0 0 0 0 0 0 17.4826 0.00389331 0.869011 2.25794 1.08324 97.6757 4.47673 29.6844 35.3836 0

M08775_2.00_rc_shift6 (M08775_2.00_rc)
; positions_6nt_m1 versus M08775_2.00_rc; m=15/218; ncol2=9; w=0; offset=0; strand=R; shift=6; score=0.666563; ------vCAGGTGyr- ; cor=; Ncor= a 0 0 0 0 0 0 33.2041 0 100 0 0 0 0 2.49199 37.2957 0 c 0 0 0 0 0 0 34.2686 100 0 0 0 0 0 65.935 8.0382 0 g 0 0 0 0 0 0 32.4113 0 0 100 100 0.11602 100 0 34.674 0 t 0 0 0 0 0 0 0.11602 0 0 0 0 99.884 0 31.573 19.9921 0

M01022_2.00_rc_shift6 (M01022_2.00_rc)
; positions_6nt_m1 versus M01022_2.00_rc; m=16/218; ncol2=11; w=0; offset=0; strand=R; shift=6; score=0.666105; ------gtgGGTGGTC ; cor=; Ncor= a 0 0 0 0 0 0 22.6997 17.5912 14.8427 0 0 0 0 0 2.30614 7.41464 c 0 0 0 0 0 0 22.6997 17.5912 14.527 0.0058633 0.0058633 0.0058633 0.0058633 0.0058633 12.4033 77.7561 g 0 0 0 0 0 0 31.9008 17.5912 65.407 99.9824 99.9824 18.8412 99.9824 99.9824 12.226 7.41464 t 0 0 0 0 0 0 22.6997 47.2263 5.22334 0.0058633 0.0058633 81.147 0.0058633 0.0058633 73.0646 7.41464

M10090_2.00_rc_shift4 (ZEB1_rc)
; positions_6nt_m1 versus M10090_2.00_rc (ZEB1_rc); m=17/218; ncol2=12; w=-2; offset=-2; strand=R; shift=4; score=0.66086; ----gtwcAGGTGwrw ; cor=; Ncor= a 0 0 0 0 17.6471 23.5294 52.9412 23.5294 100 0 0 0 0 47.0588 35.2941 35.2941 c 0 0 0 0 17.6471 17.6471 5.88235 52.9412 0 0 0 0 0 5.88235 11.7647 11.7647 g 0 0 0 0 47.0588 23.5294 11.7647 11.7647 0 100 100 0 100 11.7647 29.4118 11.7647 t 0 0 0 0 17.6471 35.2941 29.4118 11.7647 0 0 0 100 0 35.2941 23.5294 41.1765

M04441_2.00_rc_shift5 (SNAI1_rc)
; positions_6nt_m1 versus M04441_2.00_rc (SNAI1_rc); m=18/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.657291; -----drCAGGTGyr- ; cor=; Ncor= a 0 0 0 0 0 26.3924 29.1363 2.11947 95.4341 7.8242 0.358441 0.189413 3.36206 6.08683 32.6156 0 c 0 0 0 0 0 15.9486 2.08741 94.9579 1.41847 2.29055 0.0248917 0 0 40.6209 14.8464 0 g 0 0 0 0 0 32.0773 54.1186 1.30685 0.434616 88.5295 99.4773 0.209351 95.1569 19.7051 31.9884 0 t 0 0 0 0 0 25.5817 14.6577 1.61574 2.71277 1.35572 0.139394 99.6012 1.48102 33.5871 20.5496 0

M04214_2.00_rc_shift6 (TCF4_rc)
; positions_6nt_m1 versus M04214_2.00_rc (TCF4_rc); m=19/218; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.655728; ------gCAGGTGb-- ; cor=; Ncor= a 0 0 0 0 0 0 24.0633 0 100 0 5.88659 0 0 8.34889 0 0 c 0 0 0 0 0 0 13.9395 100 0 17.2037 2.55795 0 0 34.7188 0 0 g 0 0 0 0 0 0 52.9805 0 0 81.8618 91.5555 0 100 27.7783 0 0 t 0 0 0 0 0 0 9.01677 0 0 0.934488 0 100 0 29.154 0 0

M02805_2.00_rc_shift5 (FIGLA_rc)
; positions_6nt_m1 versus M02805_2.00_rc (FIGLA_rc); m=20/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.653709; -----wmCAGGTGkw- ; cor=; Ncor= a 0 0 0 0 0 42.3034 46.7416 3.39603 96.0604 0 0 0.76087 1.6031 13.3146 25.2247 0 c 0 0 0 0 0 16.236 31.9663 92.999 0.917431 14.8095 22.8435 0 0 8.98876 9.83146 0 g 0 0 0 0 0 15.8989 12.6404 1.72414 0 84.7619 77.1565 2.5 98.3969 38.9326 15.1685 0 t 0 0 0 0 0 25.5618 8.65169 1.88088 3.02213 0.428571 0 96.7391 0 38.764 49.7753 0

M02794_2.00_rc_shift5 (MESP1_rc)
; positions_6nt_m1 versus M02794_2.00_rc (MESP1_rc); m=21/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.646028; -----mvCAGGTGyd- ; cor=; Ncor= a 0 0 0 0 0 26.8293 37.6307 4.79042 88.8545 6.62651 4.21687 0 0 2.09059 29.3706 0 c 0 0 0 0 0 32.4042 25.4355 85.9281 0 4.51807 9.33735 0 0 31.7073 4.8951 0 g 0 0 0 0 0 18.4669 36.5854 9.28144 11.1455 86.4458 86.4458 11.4198 100 19.1638 25.5245 0 t 0 0 0 0 0 22.2997 0.348432 0 0 2.40964 0 88.5802 0 47.0383 40.2098 0

M08853_2.00_rc_shift5 (SNAI2_rc)
; positions_6nt_m1 versus M08853_2.00_rc (SNAI2_rc); m=22/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.645613; -----rrCAGGTGca- ; cor=; Ncor= a 0 0 0 0 0 40 43 0.2 100 0 0 0 0 0.4 37.4 0 c 0 0 0 0 0 7.2 0.4 99.8 0 0 0 0 0 56.2 23.2 0 g 0 0 0 0 0 42.6 56.4 0 0 100 100 0 99.4 21 18.8 0 t 0 0 0 0 0 10.2 0.2 0 0 0 0 100 0.6 22.4 20.6 0

M07727_2.00_rc_shift4 (ZNF460_rc)
; positions_6nt_m1 versus M07727_2.00_rc (ZNF460_rc); m=23/218; ncol2=12; w=-2; offset=-2; strand=R; shift=4; score=0.642915; ----GGGGmGGyGGcg ; cor=; Ncor= a 0 0 0 0 9.3 14.5 0.1 0.1 60.9 0.1 0.1 13.7 0.1 0.1 10.5 0.1 c 0 0 0 0 18.9 4.5 22.1 0.1 28.5 0.1 0.1 50.1 0.1 14.5 66.1 17.3 g 0 0 0 0 68.1 77.3 77.7 99.7 0.1 99.7 99.7 9.7 95.7 85.3 23.3 66.9 t 0 0 0 0 3.7 3.7 0.1 0.1 10.5 0.1 0.1 26.5 4.1 0.1 0.1 15.7

M04215_2.00_rc_shift6 (TCF4_rc)
; positions_6nt_m1 versus M04215_2.00_rc (TCF4_rc); m=24/218; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.639026; ------rCAGGTGy-- ; cor=; Ncor= a 0 0 0 0 0 0 25.5751 0 100 0 18.3384 0 0 11.0966 0 0 c 0 0 0 0 0 0 18.4861 100 0 1.72533 7.7096 0 0 35.0603 0 0 g 0 0 0 0 0 0 42.5557 0 0 93.1711 73.952 0 100 23.7516 0 0 t 0 0 0 0 0 0 13.383 0 0 5.10355 0 100 0 30.0915 0 0

M02775_2.00_rc_shift5 (TCF3_rc)
; positions_6nt_m1 versus M02775_2.00_rc (TCF3_rc); m=25/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score= 0.6379; -----hvCAGGTGyk- ; cor=; Ncor= a 0 0 0 0 0 28.8114 32.7478 0.063678 98.9219 0 3.38422 0.242874 0 2.73112 23.5799 0 c 0 0 0 0 0 26.8368 25.3622 99.325 0.0887874 5.62682 13.3554 0 0 36.4406 13.0017 0 g 0 0 0 0 0 17.8613 38.646 0.267448 0.443937 94.3732 83.2604 0.0639141 100 16.9381 27.2214 0 t 0 0 0 0 0 26.4906 3.24401 0.343861 0.545408 0 0 99.6932 0 43.8902 36.1969 0

M04442_2.00_rc_shift5 (SNAI1_rc)
; positions_6nt_m1 versus M04442_2.00_rc (SNAI1_rc); m=26/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.634371; -----rrCAGGTGyr- ; cor=; Ncor= a 0 0 0 0 0 32.1328 32.3875 0 100 0.408703 0 0 0 2.37716 37.4258 0 c 0 0 0 0 0 14.6578 0 100 0 0 0 0 0 59.4683 13.6551 0 g 0 0 0 0 0 34.8196 58.8029 0 0 99.5913 100 0 100 11.9189 35.0855 0 t 0 0 0 0 0 18.3899 8.80954 0 0 0 0 100 0 26.2356 13.8336 0

M04137_2.00_rc_shift6 (TCF12_rc)
; positions_6nt_m1 versus M04137_2.00_rc (TCF12_rc); m=27/218; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.633143; ------gCAsGTGb-- ; cor=; Ncor= a 0 0 0 0 0 0 22.4971 2.26478 100 0 14.922 0 0 11.2287 0 0 c 0 0 0 0 0 0 14.1447 97.7352 0 32.8689 6.04793 0 0 33.4859 0 0 g 0 0 0 0 0 0 51.5589 0 0 62.6366 79.0301 0 100 25.5185 0 0 t 0 0 0 0 0 0 11.7992 0 0 4.49454 0 100 0 29.7668 0 0

M04138_2.00_rc_shift6 (TCF12_rc)
; positions_6nt_m1 versus M04138_2.00_rc (TCF12_rc); m=28/218; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.632377; ------gCAGRTGy-- ; cor=; Ncor= a 0 0 0 0 0 0 23.572 3.52541 100 0 25.5557 0 0 16.6358 0 0 c 0 0 0 0 0 0 14.6699 96.4746 0 4.52956 5.17795 0 0 29.7478 0 0 g 0 0 0 0 0 0 46.9028 0 0 85.2456 69.2663 0 100 21.365 0 0 t 0 0 0 0 0 0 14.8553 0 0 10.2248 0 100 0 32.2515 0 0

M02807_2.00_rc_shift5 (TCF4_rc)
; positions_6nt_m1 versus M02807_2.00_rc (TCF4_rc); m=29/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.631453; -----wvCAGGTGyr- ; cor=; Ncor= a 0 0 0 0 0 26.4568 30.986 0.122597 99.4279 0 5.56204 0 0.0638695 2.01121 25.4979 0 c 0 0 0 0 0 23.7915 31.0991 99.7205 0 1.86255 9.65227 0 0 47.4036 10.4647 0 g 0 0 0 0 0 23.6636 36.0757 0.0245194 0 97.8679 84.7857 0 99.9067 12.1214 40.7376 0 t 0 0 0 0 0 26.088 1.83919 0.132405 0.572071 0.269516 0 100 0.0294782 38.4638 23.2997 0

M04395_2.00_rc_shift5 (SNAI2_rc)
; positions_6nt_m1 versus M04395_2.00_rc (SNAI2_rc); m=30/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.631255; -----rrCAGGTGcr- ; cor=; Ncor= a 0 0 0 0 0 34.6441 46.5531 0 100 3.56037 0 0 0.512821 3.74194 37.6205 0 c 0 0 0 0 0 13.6662 0.264692 100 0 0 0 0 0 59.0645 7.87723 0 g 0 0 0 0 0 34.93 46.0207 0 0 96.3684 100 0 99.1464 13.0474 45.5218 0 t 0 0 0 0 0 16.7598 7.16155 0 0 0.0712074 0 100 0.340819 24.1461 8.98042 0

M04608_2.00_rc_shift5 (SNAI3_rc)
; positions_6nt_m1 versus M04608_2.00_rc (SNAI3_rc); m=31/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.630515; -----rrCAGGTGyr- ; cor=; Ncor= a 0 0 0 0 0 43.1493 55.3369 0.806723 99.8979 2.20903 0.102145 0.168124 1.9385 2.8208 54.0541 0 c 0 0 0 0 0 12.0654 0.333556 98.6218 0 1.05506 0 0 0 54.0929 5.86092 0 g 0 0 0 0 0 28.8344 42.5284 0.571429 0 96.7359 99.8979 1.17687 98.0615 17.1091 35.044 0 t 0 0 0 0 0 15.9509 1.8012 0 0.102145 0 0 98.655 0 25.9771 5.041 0

M00118_2.00_rc_shift6 (M00118_2.00_rc)
; positions_6nt_m1 versus M00118_2.00_rc; m=32/218; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.629551; ------vCAGgTGb-- ; cor=; Ncor= a 0 0 0 0 0 0 25.8484 2.13367 93.9038 0.688338 20.3145 0.42431 0.330192 11.7426 0 0 c 0 0 0 0 0 0 29.7327 97.3045 3.16537 18.6627 13.8923 0.692607 0.0974827 31.9197 0 0 g 0 0 0 0 0 0 32.209 0.300546 1.75465 80.3606 65.4532 0.121567 98.6837 25.3613 0 0 t 0 0 0 0 0 0 12.2099 0.261282 1.17618 0.28838 0.340049 98.7615 0.888625 30.9764 0 0

M09840_2.00_rc_shift5 (MYOD1_rc)
; positions_6nt_m1 versus M09840_2.00_rc (MYOD1_rc); m=33/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.628401; -----rrCAGgTGsw- ; cor=; Ncor= a 0 0 0 0 0 35.7143 42.8571 0 100 7.14286 21.4286 0 0 7.14286 28.5714 0 c 0 0 0 0 0 0 14.2857 100 0 7.14286 21.4286 0 0 35.7143 21.4286 0 g 0 0 0 0 0 64.2857 28.5714 0 0 85.7143 50 0 100 35.7143 14.2857 0 t 0 0 0 0 0 0 14.2857 0 0 0 7.14286 100 0 21.4286 35.7143 0

M09838_2.00_rc_shift4 (MYOD1_rc)
; positions_6nt_m1 versus M09838_2.00_rc (MYOD1_rc); m=34/218; ncol2=12; w=-2; offset=-2; strand=R; shift=4; score=0.627094; ----sraCAGGTGkyg ; cor=; Ncor= a 0 0 0 0 20 40 60 0 100 0 0 0 0 0 0 20 c 0 0 0 0 40 20 0 100 0 0 20 0 0 20 40 0 g 0 0 0 0 40 40 20 0 0 80 80 0 100 40 0 60 t 0 0 0 0 0 0 20 0 0 20 0 100 0 40 60 20

M08080_2.00_rc_shift4 (ZEB1_rc)
; positions_6nt_m1 versus M08080_2.00_rc (ZEB1_rc); m=35/218; ncol2=11; w=-2; offset=-2; strand=R; shift=4; score=0.626894; ----sssCAGGTGss- ; cor=; Ncor= a 0 0 0 0 19.1564 15.664 16.9308 0.640866 95.7276 0.149039 0.606091 0 3.28879 23.4239 18.3417 0 c 0 0 0 0 28.9533 32.7935 25.7241 96.284 1.76362 3.2242 0.481892 1.10785 0.784937 25.729 25.9725 0 g 0 0 0 0 34.5521 30.389 47.4986 0.884296 2.48895 95.6679 98.753 0 95.3599 27.5722 39.7337 0 t 0 0 0 0 17.3382 21.1536 9.84649 2.19087 0.0198718 0.958816 0.158975 98.8872 0.566347 23.2749 15.9521 0

M00220_2.00_rc_shift6 (SNAI2_rc)
; positions_6nt_m1 versus M00220_2.00_rc (SNAI2_rc); m=36/218; ncol2=8; w=0; offset=0; strand=R; shift=6; score= 0.6237; ------rCAGGTgs-- ; cor=; Ncor= a 0 0 0 0 0 0 50.4755 2.99164 99.9786 7.86204 0 0 15.8913 16.906 0 0 c 0 0 0 0 0 0 2.9212 96.2474 0.00714082 2.86347 2.14939 0.00714082 2.81203 39.4285 0 0 g 0 0 0 0 0 0 35.9181 0.00746046 0.00714082 89.2674 97.1223 0.00714082 60.7343 26.7596 0 0 t 0 0 0 0 0 0 10.6852 0.753506 0.00714082 0.00714082 0.721223 99.9786 20.5624 16.906 0 0

M07842_2.00_rc_shift7 (ZEB1_rc)
; positions_6nt_m1 versus M07842_2.00_rc (ZEB1_rc); m=37/218; ncol2=8; w=0; offset=1; strand=R; shift=7; score=0.622353; -------CAGGTGag- ; cor=; Ncor= a 0 0 0 0 0 0 0 2.2173 100 0 0 0 20.3991 45.0111 18.1818 0 c 0 0 0 0 0 0 0 97.7827 0 0 0 0 0 18.847 11.7517 0 g 0 0 0 0 0 0 0 0 0 100 100 0 79.6009 14.6341 67.4057 0 t 0 0 0 0 0 0 0 0 0 0 0 100 0 21.5078 2.6608 0

M07882_2.00_rc_shift4 (CTCF_rc)
; positions_6nt_m1 versus M07882_2.00_rc (CTCF_rc); m=38/218; ncol2=12; w=-2; offset=-2; strand=R; shift=4; score=0.621435; ----CAsyAGrkGGCr ; cor=; Ncor= a 0 0 0 0 1.0101 80.404 2.6263 12.7273 89.293 0.404 42.6263 2.0202 0.6061 7.47471 8.4848 43.8384 c 0 0 0 0 98.9899 0.8081 63.4343 48.2828 3.4343 0.6061 0.202 2.0202 0.202 3.8384 80.6061 0.202 g 0 0 0 0 0 13.5354 33.1313 7.0707 5.05051 98.5859 56.7677 53.1313 99.1919 84.4445 1.2121 55.5556 t 0 0 0 0 0 5.2525 0.8081 31.9192 2.2222 0.404 0.404 42.8283 0 4.2424 9.697 0.404

M08848_2.00_rc_shift5 (ZEB1_rc)
; positions_6nt_m1 versus M08848_2.00_rc (ZEB1_rc); m=39/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.621205; -----smCAGGTrwg- ; cor=; Ncor= a 0 0 0 0 0 5 36.2 17.4 97.4 2.2 1 14.6 31.4 44 20.8 0 c 0 0 0 0 0 27.4 34 81.2 0.2 0.4 0.4 1.4 0.6 8 13.8 0 g 0 0 0 0 0 43.6 22.8 0.4 0.2 95.2 96.8 0.6 67.2 14.4 60.2 0 t 0 0 0 0 0 24 7 1 2.2 2.2 1.8 83.4 0.8 33.6 5.2 0

M08849_2.00_rc_shift5 (M08849_2.00_rc)
; positions_6nt_m1 versus M08849_2.00_rc; m=40/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.621205; -----smCAGGTrwg- ; cor=; Ncor= a 0 0 0 0 0 5 36.2 17.4 97.4 2.2 1 14.6 31.4 44 20.8 0 c 0 0 0 0 0 27.4 34 81.2 0.2 0.4 0.4 1.4 0.6 8 13.8 0 g 0 0 0 0 0 43.6 22.8 0.4 0.2 95.2 96.8 0.6 67.2 14.4 60.2 0 t 0 0 0 0 0 24 7 1 2.2 2.2 1.8 83.4 0.8 33.6 5.2 0

M04444_2.00_rc_shift5 (SNAI1_rc)
; positions_6nt_m1 versus M04444_2.00_rc (SNAI1_rc); m=41/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.619474; -----rrCAGGTGCr- ; cor=; Ncor= a 0 0 0 0 0 43.5266 39.7461 0 99.954 1.94228 0 0 0.206476 1.78242 42.8155 0 c 0 0 0 0 0 12.6969 0.270699 99.9671 0 0.0805257 0 0 0 69.3091 4.56805 0 g 0 0 0 0 0 27.676 54.8679 0.0263002 0 97.945 100 0 99.6592 9.42949 46.6276 0 t 0 0 0 0 0 16.1005 5.11528 0.00657505 0.0460193 0.0322103 0 100 0.134373 19.479 5.98876 0

M04607_2.00_rc_shift5 (SNAI3_rc)
; positions_6nt_m1 versus M04607_2.00_rc (SNAI3_rc); m=42/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.615761; -----arCAGGTGya- ; cor=; Ncor= a 0 0 0 0 0 47.2471 60.9081 0.364732 99.4113 1.83287 0 0 1.4752 3.74285 62.4833 0 c 0 0 0 0 0 10.5794 0 99.0802 0 0.45045 0.287265 0.19084 0 54.1327 9.18558 0 g 0 0 0 0 0 24.4078 36.2463 0 0.540971 97.0488 99.7127 0.445293 98.054 14.7375 20.9479 0 t 0 0 0 0 0 17.7657 2.84559 0.555027 0.0477327 0.667909 0 99.3639 0.47081 27.3869 7.38318 0

M09393_2.00_shift5 (TCF7L2)
; positions_6nt_m1 versus M09393_2.00 (TCF7L2); m=43/218; ncol2=10; w=-1; offset=-1; strand=D; shift=5; score=0.614475; -----dGCAGsTGks- ; cor=; Ncor= a 0 0 0 0 0 30.7847 12.6761 2.8169 93.7626 3.01811 9.45674 9.05433 0.402414 8.4507 9.25553 0 c 0 0 0 0 0 4.22535 14.6881 89.5372 0.804829 10.4628 58.9537 0.603622 1.40845 10.664 27.3642 0 g 0 0 0 0 0 38.2294 68.4105 5.23139 2.61569 82.495 29.9799 0.804829 95.171 46.0765 52.9175 0 t 0 0 0 0 0 26.7606 4.22535 2.41449 2.8169 4.02414 1.60966 89.5372 3.01811 34.8089 10.4628 0

M00734_2.00_shift7 (M00734_2.00)
; positions_6nt_m1 versus M00734_2.00; m=44/218; ncol2=10; w=0; offset=1; strand=D; shift=7; score=0.614375; -------gAGGTGTkA ; cor=; Ncor= a 0 0 0 0 0 0 0 22.6873 92.4433 9.18565 0.008635 0.008635 0.008635 0.008635 0.008635 74.5529 c 0 0 0 0 0 0 0 22.6873 2.51891 0.008635 0.008635 0.008635 0.008635 20.2328 19.2088 2.3213 g 0 0 0 0 0 0 0 31.938 2.51891 90.7971 99.9741 0.008635 99.9741 0.008635 41.9593 20.8045 t 0 0 0 0 0 0 0 22.6873 2.51891 0 0 99.9741 0 79.7499 38.8232 2.3213

M04393_2.00_rc_shift5 (SNAI2_rc)
; positions_6nt_m1 versus M04393_2.00_rc (SNAI2_rc); m=45/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.610372; -----rrCAGGTGcr- ; cor=; Ncor= a 0 0 0 0 0 37.8363 53.9334 0 100 1.10288 0 0 0 2.69082 48.6089 0 c 0 0 0 0 0 13.0222 0.117782 100 0 0 0 0 0 65.6645 9.09527 0 g 0 0 0 0 0 32.4109 38.912 0 0 98.8971 100 0.0501283 100 7.14839 32.754 0 t 0 0 0 0 0 16.7306 7.03681 0 0 0 0 99.9499 0 24.4963 9.54176 0

M07806_2.00_rc_shift6 (TCF12_rc)
; positions_6nt_m1 versus M07806_2.00_rc (TCF12_rc); m=46/218; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.610277; ------sCAGGTGy-- ; cor=; Ncor= a 0 0 0 0 0 0 19.5804 0 94.8718 0 8.1585 0 0 2.7972 0 0 c 0 0 0 0 0 0 50.1166 100 0 0 21.9114 0 0 34.2657 0 0 g 0 0 0 0 0 0 27.972 0 0 100 69.9301 0 100 18.648 0 0 t 0 0 0 0 0 0 2.331 0 5.1282 0 0 100 0 44.289 0 0

M08054_2.00_shift4 (MYC)
; positions_6nt_m1 versus M08054_2.00 (MYC); m=47/218; ncol2=12; w=-2; offset=-2; strand=D; shift=4; score=0.609312; ----srgCACGTGGss ; cor=; Ncor= a 0 0 0 0 21.3274 28.7535 10.603 0.930797 94.2533 0.768919 5.92877 2.28652 0.546338 5.78713 17.7863 18.4136 c 0 0 0 0 27.2764 20.9632 24.2412 97.4707 1.27479 92.6346 1.41643 3.4399 0.627276 9.55079 35.5524 33.3671 g 0 0 0 0 36.119 30.8377 56.6775 1.13314 3.27803 3.17685 91.5621 1.19385 97.9361 75.7993 26.0421 27.2157 t 0 0 0 0 15.2772 19.4456 8.47835 0.465399 1.19385 3.41967 1.09268 93.0797 0.890328 8.86281 20.6192 21.0036

M03994_2.00_shift7 (M03994_2.00)
; positions_6nt_m1 versus M03994_2.00; m=48/218; ncol2=10; w=0; offset=1; strand=D; shift=7; score=0.608584; -------rAGGTGTkA ; cor=; Ncor= a 0 0 0 0 0 0 0 42.3903 79.9232 9.13706 0.632711 0 0.414805 5.25415 2.33824 76.683 c 0 0 0 0 0 0 0 4.9984 1.45967 6.52647 0.632711 5.10794 0 8.89541 15.631 4.74201 g 0 0 0 0 0 0 0 29.67 11.5493 75.4411 98.7346 0 99.5852 9.57967 52.7546 16.2899 t 0 0 0 0 0 0 0 22.9414 7.06786 8.89533 0 94.8921 0 76.2708 29.2761 2.28501

M06050_2.00_rc_shift6 (M06050_2.00_rc)
; positions_6nt_m1 versus M06050_2.00_rc; m=49/218; ncol2=7; w=0; offset=0; strand=R; shift=6; score=0.607661; ------aCAGGTG--- ; cor=; Ncor= a 0 0 0 0 0 0 63.6364 0 100 9.09091 0 0 0 0 0 0 c 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 18.1818 0 0 90.9091 100 0 100 0 0 0 t 0 0 0 0 0 0 18.1818 0 0 0 0 100 0 0 0 0

M04298_2.00_rc_shift4 (CREB3L2,CREB3L4_rc)
; positions_6nt_m1 versus M04298_2.00_rc (CREB3L2,CREB3L4_rc); m=50/218; ncol2=12; w=-2; offset=-2; strand=R; shift=4; score=0.607032; ----grTGAyGTGGCr ; cor=; Ncor= a 0 0 0 0 11.4359 28.7751 0.764568 0.487876 98.0908 0.0204652 3.4062 0.375968 1.06079 1.51999 23.1033 37.6666 c 0 0 0 0 10.7543 10.8556 4.69762 1.07041 0.13372 61.6072 0.159779 2.07888 0.424318 0.521887 69.7112 9.16214 g 0 0 0 0 62.5341 57.984 3.58865 96.148 1.35205 9.90518 95.8966 0.206414 96.5981 86.1374 1.35684 43.7932 t 0 0 0 0 15.2757 2.38533 90.9492 2.29374 0.423446 28.4672 0.537439 97.3387 1.91675 11.8207 5.82863 9.37808

M09428_2.00_shift6 (M09428_2.00)
; positions_6nt_m1 versus M09428_2.00; m=51/218; ncol2=12; w=0; offset=0; strand=D; shift=6; score=0.606371; ------rgagGTGwga ; cor=; Ncor= a 0 0 0 0 0 0 26.2 21.8 53.8 20.6 1.6 1.8 0 27.4 3 60.6 c 0 0 0 0 0 0 7.6 18 5.8 1.4 24.4 0.6 0.4 4.8 23 2 g 0 0 0 0 0 0 50.2 41.8 22.4 56.4 73.8 0 94.2 14.2 64.6 18 t 0 0 0 0 0 0 16 18.4 18 21.6 0.2 97.6 5.4 53.6 9.4 19.4

M01023_2.00_rc_shift7 (M01023_2.00_rc)
; positions_6nt_m1 versus M01023_2.00_rc; m=52/218; ncol2=10; w=0; offset=1; strand=R; shift=7; score=0.606126; -------tgGGTGGTC ; cor=; Ncor= a 0 0 0 0 0 0 0 20.1934 17.5725 0 0 0 0 0 0 4.81268 c 0 0 0 0 0 0 0 20.1934 7.66789 0.00604958 0.00604958 0.00604958 0.00604958 0.00604958 9.29458 85.5619 g 0 0 0 0 0 0 0 20.1934 58.1273 99.9819 99.9819 9.6809 99.9819 99.9819 9.88725 4.81268 t 0 0 0 0 0 0 0 39.4199 16.6323 0.00604958 0.00604958 90.307 0.00604958 0.00604958 80.8121 4.81268

M01024_2.00_rc_shift7 (M01024_2.00_rc)
; positions_6nt_m1 versus M01024_2.00_rc; m=53/218; ncol2=10; w=0; offset=1; strand=R; shift=7; score=0.605382; -------tgGGTGGTC ; cor=; Ncor= a 0 0 0 0 0 0 0 20.1113 15.2774 0 0 0 0 0 0 4.8953 c 0 0 0 0 0 0 0 20.1113 5.44625 0.00659052 0.00659052 0.00659052 0.00659052 0.00659052 18.8205 85.3141 g 0 0 0 0 0 0 0 20.1113 65.1146 99.9802 99.9802 10.0581 99.9802 99.9802 9.289 4.8953 t 0 0 0 0 0 0 0 39.6661 14.1617 0.00659052 0.00659052 89.9287 0.00659052 0.00659052 71.8839 4.8953

M04314_2.00_shift4 (CREB3L1,CREB3L2)
; positions_6nt_m1 versus M04314_2.00 (CREB3L1,CREB3L2); m=54/218; ncol2=12; w=-2; offset=-2; strand=D; shift=4; score=0.605325; ----grTGAyGTGGCr ; cor=; Ncor= a 0 0 0 0 12.3252 35.6507 4.18994 3.71359 92.4569 0.242981 3.86937 0.144009 1.8757 1.54196 2.10383 53.4663 c 0 0 0 0 15.7343 17.6982 20.8899 9.29509 0.646552 63.2829 0.329308 1.00806 0.727884 1.8453 93.7705 3.87911 g 0 0 0 0 52.8555 37.1132 6.44453 76.3175 3.79849 7.10043 94.1822 0 96.0806 86.7543 1.25683 35.4417 t 0 0 0 0 19.0851 9.53794 68.4757 10.6738 3.09806 29.3737 1.6191 98.8479 1.31579 9.85844 2.86885 7.21296

M04443_2.00_rc_shift5 (SNAI1_rc)
; positions_6nt_m1 versus M04443_2.00_rc (SNAI1_rc); m=55/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.604299; -----arCAGGTGcA- ; cor=; Ncor= a 0 0 0 0 0 47.7129 45.2762 1.84936 97.7416 1.39111 0.0937427 0.526617 0.98711 2.46875 68.6642 0 c 0 0 0 0 0 13.0307 0.617352 95.5615 0 0.866591 0 0 0 66.6094 6.36336 0 g 0 0 0 0 0 24.1379 48.7267 1.73728 1.45592 97.2178 99.9063 1.86606 99.0129 8.21094 16.7752 0 t 0 0 0 0 0 15.1185 5.37978 0.851827 0.802476 0.524515 0 97.6073 0 22.7109 8.19721 0

M09649_2.00_shift8 (M09649_2.00)
; positions_6nt_m1 versus M09649_2.00; m=56/218; ncol2=8; w=0; offset=2; strand=D; shift=8; score=0.602945; --------AGGTGtyA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 78.6 16.8 0.2 0.2 0.2 15.9 1.6 71.9 c 0 0 0 0 0 0 0 0 0.2 2.1 14.3 8.3 0.2 22.6 49.5 2.2 g 0 0 0 0 0 0 0 0 13.9 77.8 84.2 0.2 99.5 6.6 23.1 13.3 t 0 0 0 0 0 0 0 0 7.4 3.4 1.4 91.4 0.2 55 26 12.7

M00221_2.00_rc_shift6 (SNAI2_rc)
; positions_6nt_m1 versus M00221_2.00_rc (SNAI2_rc); m=57/218; ncol2=7; w=0; offset=0; strand=R; shift=6; score=0.602213; ------rCAGGTg--- ; cor=; Ncor= a 0 0 0 0 0 0 39.6664 11.9741 94.8664 19.9736 7.08434 0.624151 17.3591 0 0 0 c 0 0 0 0 0 0 5.87381 77.6918 0.0166137 3.10934 0.0218815 0.0130188 6.51505 0 0 0 g 0 0 0 0 0 0 35.5345 0.130387 0.000506731 69.7147 85.4462 0.0139627 54.2778 0 0 0 t 0 0 0 0 0 0 18.9254 10.2037 5.11649 7.20238 7.44756 99.3489 21.8481 0 0 0

M04151_2.00_rc_shift5 (HAND2_rc)
; positions_6nt_m1 versus M04151_2.00_rc (HAND2_rc); m=58/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.601508; -----yrCAGGTGTt- ; cor=; Ncor= a 0 0 0 0 0 21.0593 25.6044 0.375 97.9038 1.19617 3.63423 0 0 0 6.28183 0 c 0 0 0 0 0 35.6873 12.7473 99.25 0 1.91388 3.28253 0 0.873908 4.21687 5.7725 0 g 0 0 0 0 0 4.91803 61.6484 0.375 1.35635 94.9761 93.0832 3.40633 99.1261 16.0643 20.5433 0 t 0 0 0 0 0 38.3354 0 0 0.739827 1.91388 0 96.5937 0 79.7189 67.4024 0

M05844_2.00_rc_shift6 (M05844_2.00_rc)
; positions_6nt_m1 versus M05844_2.00_rc; m=59/218; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.601375; ------mCAGGTrw-- ; cor=; Ncor= a 0 0 0 0 0 0 36.5 13.1 99.9 0 0 0 49.5 33.8 0 0 c 0 0 0 0 0 0 25.6 81.4 0.1 0 0 0 0.1 20.2 0 0 g 0 0 0 0 0 0 19.9 0.1 0 99.9 99.9 0 50.4 15.4 0 0 t 0 0 0 0 0 0 18.1 5.4 0 0 0 99.9 0.1 30.6 0 0

M02496_2.00_shift7 (M02496_2.00)
; positions_6nt_m1 versus M02496_2.00; m=60/218; ncol2=10; w=0; offset=1; strand=D; shift=7; score=0.600865; -------dAgGTGTbr ; cor=; Ncor= a 0 0 0 0 0 0 0 33.468 71.4815 15.0324 0.602261 0.505897 1.10519 9.54381 6.14112 56.851 c 0 0 0 0 0 0 0 8.50444 3.06313 10.2801 2.08118 10.4707 0.0235181 9.07835 35.6949 6.96177 g 0 0 0 0 0 0 0 32.4788 16.4354 67.3705 95.8646 0.0286838 98.496 3.44145 28.6458 25.8015 t 0 0 0 0 0 0 0 25.5488 9.01995 7.31705 1.45199 88.9948 0.375317 77.9364 29.5182 10.3857

M06085_2.00_rc_shift4 (M06085_2.00_rc)
; positions_6nt_m1 versus M06085_2.00_rc; m=61/218; ncol2=11; w=-2; offset=-2; strand=R; shift=4; score=0.600171; ----CAACAGGTGGt- ; cor=; Ncor= a 0 0 0 0 0 100 100 0 100 0 0 0 0 0 0 0 c 0 0 0 0 100 0 0 100 0 0 0 0 0 0 11.1111 0 g 0 0 0 0 0 0 0 0 0 100 100 0 100 77.7778 22.2222 0 t 0 0 0 0 0 0 0 0 0 0 0 100 0 22.2222 66.6667 0

M04150_2.00_rc_shift5 (HAND2_rc)
; positions_6nt_m1 versus M04150_2.00_rc (HAND2_rc); m=62/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.598732; -----ygCAGGTGTT- ; cor=; Ncor= a 0 0 0 0 0 22.8237 21.9831 0 99.4576 0.0977708 1.60651 0 0 0.481888 2.48351 0 c 0 0 0 0 0 29.5496 20.7078 99.4776 0 2.99179 0.119 0.261727 0 5.79927 5.31781 0 g 0 0 0 0 0 5.29186 56.9425 0.522403 0.0401768 96.8127 98.1952 0.0603986 100 11.449 22.7305 0 t 0 0 0 0 0 42.3349 0.366651 0 0.50221 0.0977708 0.0793336 99.6779 0 82.2699 69.4682 0

M04394_2.00_rc_shift5 (SNAI2_rc)
; positions_6nt_m1 versus M04394_2.00_rc (SNAI2_rc); m=63/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.597753; -----rrCAGGTGCa- ; cor=; Ncor= a 0 0 0 0 0 41.7209 61.9346 0 99.9118 1.92227 0 0 0.413835 2.72069 60.9233 0 c 0 0 0 0 0 10.748 0.435455 100 0.0579491 0 0.0126072 0 0.0376213 68.1978 7.1332 0 g 0 0 0 0 0 34.9952 32.4259 0 0 97.9789 99.9874 0.0378119 99.4583 8.03481 24.5091 0 t 0 0 0 0 0 12.5359 5.20405 0 0.0302343 0.0988313 0 99.9622 0.0902912 21.0467 7.43432 0

M02495_2.00_rc_shift7 (M02495_2.00_rc)
; positions_6nt_m1 versus M02495_2.00_rc; m=64/218; ncol2=10; w=0; offset=1; strand=R; shift=7; score=0.597677; -------dagGTGtbr ; cor=; Ncor= a 0 0 0 0 0 0 0 29.0559 48.3687 19.6139 4.73222 0.037616 6.40584 18.2834 11.3747 42.596 c 0 0 0 0 0 0 0 15.7875 10.3693 16.7139 9.24788 24.0389 0.0107506 17.743 34.8619 13.2204 g 0 0 0 0 0 0 0 29.6428 24.5044 49.7116 77.0453 0.00384753 93.4297 10.135 27.1505 29.7182 t 0 0 0 0 0 0 0 25.5138 16.7576 13.9606 8.97456 75.9196 0.153694 53.8387 26.6129 14.4654

M03552_2.00_shift8 (TBX5)
; positions_6nt_m1 versus M03552_2.00 (TBX5); m=65/218; ncol2=8; w=0; offset=2; strand=D; shift=8; score=0.596714; --------AGGTGTkA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 71.9012 9.9492 0 2.09692 1.4746 6.77258 3.64057 71.9872 c 0 0 0 0 0 0 0 0 3.54723 8.04403 0 6.10438 0 9.40635 17.7983 3.03272 g 0 0 0 0 0 0 0 0 16.3013 76.376 98.4716 7.73532 98.5254 8.40301 52.1237 13.6872 t 0 0 0 0 0 0 0 0 8.2503 5.63082 1.52838 84.0634 0 75.4181 26.4374 11.2929

M02920_2.00_rc_shift6 (ZBTB7C_rc)
; positions_6nt_m1 versus M02920_2.00_rc (ZBTB7C_rc); m=66/218; ncol2=12; w=0; offset=0; strand=R; shift=6; score=0.596611; ------ktcGGTGGTc ; cor=; Ncor= a 0 0 0 0 0 0 17.0923 19.6529 9.82318 7.1885 1.60377 0.766284 1.35005 0 1.88235 8.38433 c 0 0 0 0 0 0 19.2534 11.773 51.7682 4.3131 0.660377 0.613027 0.48216 0 0.627451 62.3011 g 0 0 0 0 0 0 30.943 20.8255 13.556 81.3099 96.0377 20.613 98.1678 96.3103 17.6471 7.83354 t 0 0 0 0 0 0 32.7112 47.7486 24.8527 7.1885 1.69811 78.0077 0 3.68969 79.8431 21.481

M07905_2.00_rc_shift4 (CTCF_rc)
; positions_6nt_m1 versus M07905_2.00_rc (CTCF_rc); m=67/218; ncol2=12; w=-2; offset=-2; strand=R; shift=4; score=0.594172; ----CAsyAGrkGGCr ; cor=; Ncor= a 0 0 0 0 0.2012 82.6961 4.2254 13.0785 93.7626 0.2012 47.4849 3.4205 1.4085 15.2918 13.6821 42.6559 c 0 0 0 0 99.7988 1.4085 65.9959 41.8511 0.6036 0 1.006 3.2193 0 5.6338 70.8249 1.2072 g 0 0 0 0 0 8.85309 27.9678 4.2254 2.6157 99.7988 50.3019 57.1429 97.9879 72.837 2.8169 54.326 t 0 0 0 0 0 7.04229 1.8109 40.8451 3.0181 0 1.2072 36.2173 0.6036 6.2374 12.6761 1.8109

M05797_2.00_shift6 (TBX18)
; positions_6nt_m1 versus M05797_2.00 (TBX18); m=68/218; ncol2=12; w=0; offset=0; strand=D; shift=6; score=0.592932; ------rrAGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 27.7635 33.3333 73.535 7.64398 1.76768 0.809249 2.60223 9.21659 5.08309 95.11 c 0 0 0 0 0 0 11.054 10.0097 5.86011 5.96859 0 9.24855 0.743494 9.03226 15.738 0.122249 g 0 0 0 0 0 0 40.617 42.2741 15.0284 81.466 98.2323 0 96.4064 10.0461 76.0508 0.611247 t 0 0 0 0 0 0 20.5656 14.3829 5.57656 4.92147 0 89.9422 0.247831 71.7051 3.12805 4.15648

M10091_2.00_rc_shift4 (ZEB1_rc)
; positions_6nt_m1 versus M10091_2.00_rc (ZEB1_rc); m=69/218; ncol2=12; w=-2; offset=-2; strand=R; shift=4; score=0.591867; ----gcmCAGGTGyrb ; cor=; Ncor= a 0 0 0 0 8.33333 25 50 0 100 0 8.33333 0 0 0 41.6667 0 c 0 0 0 0 16.6667 41.6667 41.6667 100 0 8.33333 0 0 0 58.3333 16.6667 33.3333 g 0 0 0 0 50 8.33333 8.33333 0 0 91.6667 91.6667 0 100 0 33.3333 41.6667 t 0 0 0 0 25 25 0 0 0 0 0 100 0 41.6667 8.33333 25

M04243_2.00_rc_shift4 (CREB3_rc)
; positions_6nt_m1 versus M04243_2.00_rc (CREB3_rc); m=70/218; ncol2=12; w=-2; offset=-2; strand=R; shift=4; score=0.591196; ----grTGAyGTGGmr ; cor=; Ncor= a 0 0 0 0 12.4226 37.3053 0.345473 0.22348 99.654 0.0143 1.5574 0.11919 1.19683 0.83323 28.5867 38.6171 c 0 0 0 0 9.43396 6.50723 3.29639 0.238379 0 65.7229 0 1.177 1.52848 0.323343 64.5271 8.42391 g 0 0 0 0 63.6377 54.8109 0.993234 98.7038 0.345969 5.24811 98.2646 0 95.5299 82.3902 1.52917 46.0598 t 0 0 0 0 14.5057 1.37653 95.3649 0.834327 0 29.0147 0.177989 98.7038 1.74477 16.4532 5.35697 6.89915

M00831_2.00_shift8 (M00831_2.00)
; positions_6nt_m1 versus M00831_2.00; m=71/218; ncol2=8; w=0; offset=2; strand=D; shift=8; score=0.590874; --------AGGTGTkA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 90.2439 6.25 2.04082 2.04082 2.04082 6.12245 5.40541 74.0741 c 0 0 0 0 0 0 0 0 2.43902 2.08333 2.04082 2.04082 2.04082 4.08163 21.6216 3.7037 g 0 0 0 0 0 0 0 0 4.87805 87.5 93.8776 2.04082 93.8776 2.04082 43.2432 14.8148 t 0 0 0 0 0 0 0 0 2.43902 4.16667 2.04082 93.8776 2.04082 87.7551 29.7297 7.40741

M00830_2.00_rc_shift7 (M00830_2.00_rc)
; positions_6nt_m1 versus M00830_2.00_rc; m=72/218; ncol2=10; w=0; offset=1; strand=R; shift=7; score=0.590418; -------dagGTGtbr ; cor=; Ncor= a 0 0 0 0 0 0 0 31.6182 55.8837 20.3259 5.05961 0.029216 6.06155 16.6997 10.8105 51.9912 c 0 0 0 0 0 0 0 14.9354 9.33036 15.8298 6.69453 17.9387 0.364935 16.0449 29.6813 9.49793 g 0 0 0 0 0 0 0 28.3247 19.5558 51.5161 78.3582 0.0121183 88.4082 6.58893 31.8335 25.5612 t 0 0 0 0 0 0 0 25.1217 15.2301 12.3283 9.88769 82.0199 5.16531 60.6665 27.6747 12.9497

M04294_2.00_rc_shift4 (CREB3L2,CREB3L4_rc)
; positions_6nt_m1 versus M04294_2.00_rc (CREB3L2,CREB3L4_rc); m=73/218; ncol2=12; w=-2; offset=-2; strand=R; shift=4; score=0.590021; ----grTGACGTGGcr ; cor=; Ncor= a 0 0 0 0 17.9434 26.6667 5.04587 5.20522 90.3203 0 3.20671 0.192446 4.92864 4.53875 22.0286 36.4938 c 0 0 0 0 20.2571 14.8624 14.1101 12.8731 1.4624 91.2952 0.49334 5.00361 2.49777 3.04428 61.0928 16.7452 g 0 0 0 0 44.7301 52.6809 9.44954 72.5933 6.987 1.52511 95.9793 1.20279 86.7752 71.7897 3.87816 31.465 t 0 0 0 0 17.0694 5.79001 71.3945 9.32836 1.23027 7.17973 0.320671 93.6012 5.79839 20.6273 13.0005 15.296

M04319_2.00_rc_shift4 (CREB3L1,CREB3L2_rc)
; positions_6nt_m1 versus M04319_2.00_rc (CREB3L1,CREB3L2_rc); m=74/218; ncol2=12; w=-2; offset=-2; strand=R; shift=4; score=0.586345; ----GrTGAyGTGGCr ; cor=; Ncor= a 0 0 0 0 7.47184 41.0011 0.688516 0.254534 99.3417 0 1.92802 0.132319 0.0165645 0 0.460602 58.4204 c 0 0 0 0 8.46587 20.0099 14.2798 0.986319 0 46.0448 0 0.0330797 0 0.768 99.2926 1.08401 g 0 0 0 0 73.8237 33.9585 1.91407 96.0229 0.164582 4.88497 96.9794 0 99.9834 96.576 0.164501 37.0306 t 0 0 0 0 10.2386 5.03043 83.1176 2.73624 0.493746 49.0703 1.09254 99.8346 0 2.656 0.0822504 3.46496

M07754_2.00_rc_shift4 (ZNF468_rc)
; positions_6nt_m1 versus M07754_2.00_rc (ZNF468_rc); m=75/218; ncol2=12; w=-2; offset=-2; strand=R; shift=4; score=0.585852; ----dGGGAGGGGGyG ; cor=; Ncor= a 0 0 0 0 34.5652 4.71014 0.362319 0.0724638 96.3043 0.362319 0.0724638 11.3768 0.652174 4.42029 10.2174 3.84058 c 0 0 0 0 8.76812 0.942029 0.362319 0.0724638 0.652174 0.0724638 0.0724638 0.0724638 0.362319 9.92754 46.1594 2.10145 g 0 0 0 0 30.7971 93.4058 98.3333 99.7826 0.0724638 99.4928 99.7826 88.4783 98.913 84.7101 0.942029 77.7536 t 0 0 0 0 25.8696 0.942029 0.942029 0.0724638 2.97101 0.0724638 0.0724638 0.0724638 0.0724638 0.942029 42.6812 16.3043

M01143_2.00_shift7 (CREB3L2)
; positions_6nt_m1 versus M01143_2.00 (CREB3L2); m=76/218; ncol2=8; w=0; offset=1; strand=D; shift=7; score=0.584294; -------kACGTGkc- ; cor=; Ncor= a 0 0 0 0 0 0 0 12.7712 91.8921 0.00657722 1.31338 0.00653424 2.70873 7.63889 14.2901 0 c 0 0 0 0 0 0 0 22.3416 1.47751 96.6917 0.00653424 1.96681 5.4107 0.00763126 62.2297 0 g 0 0 0 0 0 0 0 25.5317 3.68274 1.32202 98.0201 0.00653424 89.8473 59.5314 8.17013 0 t 0 0 0 0 0 0 0 39.3556 2.94766 1.97974 0.659958 98.0201 2.03323 32.822 15.3101 0

M04315_2.00_shift4 (CREB3L1,CREB3L2)
; positions_6nt_m1 versus M04315_2.00 (CREB3L1,CREB3L2); m=77/218; ncol2=12; w=-2; offset=-2; strand=D; shift=4; score=0.584197; ----grTGACGTGGCr ; cor=; Ncor= a 0 0 0 0 11.2721 25.9326 3.87837 5.04511 98.5722 0 0 0 0 0.120831 0.101859 51.5407 c 0 0 0 0 19.173 13.0062 18.0626 11.3423 0.0259605 100 0 0 0 0.38666 96.6896 3.95005 g 0 0 0 0 50.5926 49.8105 8.92207 69.9135 0 0 100 0.288866 99.5282 91.7593 0.331042 34.6002 t 0 0 0 0 18.9623 11.2507 69.1369 13.6991 1.40187 0 0 99.7111 0.471822 7.7332 2.87751 9.90905

M08190_2.00_rc_shift7 (ZEB1_rc)
; positions_6nt_m1 versus M08190_2.00_rc (ZEB1_rc); m=78/218; ncol2=10; w=0; offset=1; strand=R; shift=7; score=0.581754; -------CAGGTGtGk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 100 2.9851 1.99 0 2.9851 23.8806 6.4677 0 c 0 0 0 0 0 0 0 100 0 0 0 0 0 11.4428 0 23.3831 g 0 0 0 0 0 0 0 0 0 97.0149 98.01 0 94.0298 0 93.5323 29.8507 t 0 0 0 0 0 0 0 0 0 0 0 100 2.9851 64.6766 0 46.7662

M02498_2.00_shift8 (M02498_2.00)
; positions_6nt_m1 versus M02498_2.00; m=79/218; ncol2=8; w=0; offset=2; strand=D; shift=8; score=0.581348; --------AGGTGTbA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 99.7863 0.0586854 0.0586854 0.0586854 5.92723 5.92723 0.0712251 79.7809 c 0 0 0 0 0 0 0 0 0.0712251 0.0586854 0.0586854 0.0586854 0.0586854 0.0586854 42.8063 0.0996016 g 0 0 0 0 0 0 0 0 0.0712251 88.0869 99.8239 0.0586854 93.9554 0.0586854 28.5613 20.0199 t 0 0 0 0 0 0 0 0 0.0712251 11.7958 0.0586854 99.8239 0.0586854 93.9554 28.5613 0.0996016

M05805_2.00_shift7 (TBX6)
; positions_6nt_m1 versus M05805_2.00 (TBX6); m=80/218; ncol2=10; w=0; offset=1; strand=D; shift=7; score=0.58127; -------ragGTGTkA ; cor=; Ncor= a 0 0 0 0 0 0 0 27.0407 62.4127 11.1098 0.517488 0.362647 0.125979 3.67706 6.12236 75.4064 c 0 0 0 0 0 0 0 14.7019 6.60324 17.196 0.562099 8.25847 0 20.3371 20.876 4.43447 g 0 0 0 0 0 0 0 36.1053 18.8415 65.4486 98.9204 0 99.766 2.13163 47.4676 15.3098 t 0 0 0 0 0 0 0 22.1521 12.1425 6.24557 0 91.3789 0.107982 73.8542 25.5341 4.84935

M00753_2.00_rc_shift5 (M00753_2.00_rc)
; positions_6nt_m1 versus M00753_2.00_rc; m=81/218; ncol2=9; w=-1; offset=-1; strand=R; shift=5; score=0.580909; -----hvCAGGTGy-- ; cor=; Ncor= a 0 0 0 0 0 26.7667 26.6552 1.21724 97.02 0.509645 9.32009 0.177703 0.508982 6.29823 0 0 c 0 0 0 0 0 26.2367 25.1029 98.1588 0.660286 13.4094 11.2703 3.98428 0.0808352 34.4762 0 0 g 0 0 0 0 0 20.2299 39.3692 0.362978 0.774853 85.2816 78.4273 0.0290818 98.9542 23.3424 0 0 t 0 0 0 0 0 26.7667 8.87274 0.260953 1.54484 0.799282 0.98233 95.8089 0.455963 35.8832 0 0

M05793_2.00_shift7 (TBX21)
; positions_6nt_m1 versus M05793_2.00 (TBX21); m=82/218; ncol2=10; w=0; offset=1; strand=D; shift=7; score=0.579955; -------rAGGTGTgA ; cor=; Ncor= a 0 0 0 0 0 0 0 31.6663 73.8486 6.11811 0.114548 0 0 4.22078 2.56284 85.6316 c 0 0 0 0 0 0 0 10.3495 3.09425 11.2874 0.114548 6.13276 0 16.5142 9.83243 1.47156 g 0 0 0 0 0 0 0 35.895 15.0007 73.3466 98.8736 0.450938 99.9807 2.83353 63.8122 10.582 t 0 0 0 0 0 0 0 22.0892 8.05647 9.24798 0.897289 93.4163 0.019305 76.4315 23.7925 2.31481

M02873_2.00_rc_shift5 (SNAI2_rc)
; positions_6nt_m1 versus M02873_2.00_rc (SNAI2_rc); m=83/218; ncol2=9; w=-1; offset=-1; strand=R; shift=5; score=0.579817; -----rrCAGGTGy-- ; cor=; Ncor= a 0 0 0 0 0 34.3086 43.1476 4.20216 94.7404 12.2184 0.324087 0.0512185 10.4152 8.90467 0 0 c 0 0 0 0 0 14.2231 3.6015 90.331 1.63283 1.10306 0 0.471749 3.65439 33.9313 0 0 g 0 0 0 0 0 31.8372 40.685 2.18512 0.670934 83.7552 99.3859 0 72.0503 22.8849 0 0 t 0 0 0 0 0 19.6311 12.5659 3.28177 2.95588 2.92333 0.289972 99.477 13.8802 34.2791 0 0

M00834_2.00_rc_shift7 (M00834_2.00_rc)
; positions_6nt_m1 versus M00834_2.00_rc; m=84/218; ncol2=10; w=0; offset=1; strand=R; shift=7; score=0.57815; -------dagGTGtbr ; cor=; Ncor= a 0 0 0 0 0 0 0 31.1632 53.5178 20.5924 8.91305 2.18619 14.1096 20.4958 12.988 47.5962 c 0 0 0 0 0 0 0 14.8684 10.2781 16.8597 5.46037 18.5814 0.182111 16.7806 29.4892 11.1646 g 0 0 0 0 0 0 0 28.1977 18.9161 49.1523 72.0613 0.0176356 77.2355 5.31335 28.9052 27.1874 t 0 0 0 0 0 0 0 25.7707 17.288 13.3956 13.5653 79.2147 8.47278 57.4102 28.6176 14.0518

M04061_2.00_rc_shift5 (HES2_rc)
; positions_6nt_m1 versus M04061_2.00_rc (HES2_rc); m=85/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.576896; -----kkyRyRtgvs- ; cor=; Ncor= a 0 0 0 0 0 18.1149 11.1111 19.7847 67.9803 9.09091 26.5957 0 16.4975 26.8889 2.9703 0 c 0 0 0 0 0 24.7423 21.4286 27.3217 0 40.1186 1.41844 20.7547 8.12183 25.1111 32.6733 0 g 0 0 0 0 0 29.8969 40.2778 24.3607 32.0197 23.3202 71.9858 24.5283 51.5228 28.2222 43.0693 0 t 0 0 0 0 0 27.2459 27.1825 28.533 0 27.4704 0 54.717 23.8579 19.7778 21.2871 0

M08764_2.00_shift5 (NEUROD4,NEUROD6)
; positions_6nt_m1 versus M08764_2.00 (NEUROD4,NEUROD6); m=86/218; ncol2=10; w=-1; offset=-1; strand=D; shift=5; score=0.575218; -----rrCAGATGGy- ; cor=; Ncor= a 0 0 0 0 0 43.4 52.4 2.2 99.8 0.2 73 0.8 0.2 0.8 7.6 0 c 0 0 0 0 0 7.2 20.8 97.6 0 0 22 0 0 4.8 39.6 0 g 0 0 0 0 0 47 26.6 0.2 0 97.4 5 0 99.2 76.8 12.6 0 t 0 0 0 0 0 2.4 0.2 0 0.2 2.4 0 99.2 0.6 17.6 40.2 0

M08735_2.00_shift5 (NEUROD1,NEUROD4,NEUROD6)
; positions_6nt_m1 versus M08735_2.00 (NEUROD1,NEUROD4,NEUROD6); m=87/218; ncol2=10; w=-1; offset=-1; strand=D; shift=5; score=0.575218; -----rrCAGATGGy- ; cor=; Ncor= a 0 0 0 0 0 43.4 52.4 2.2 99.8 0.2 73 0.8 0.2 0.8 7.6 0 c 0 0 0 0 0 7.2 20.8 97.6 0 0 22 0 0 4.8 39.6 0 g 0 0 0 0 0 47 26.6 0.2 0 97.4 5 0 99.2 76.8 12.6 0 t 0 0 0 0 0 2.4 0.2 0 0.2 2.4 0 99.2 0.6 17.6 40.2 0

M05801_2.00_shift7 (TBX3)
; positions_6nt_m1 versus M05801_2.00 (TBX3); m=88/218; ncol2=10; w=0; offset=1; strand=D; shift=7; score=0.575066; -------ragGTGTsa ; cor=; Ncor= a 0 0 0 0 0 0 0 25.3244 50.9615 10.3265 0.231214 0.485584 0 3.33527 3.20936 58.016 c 0 0 0 0 0 0 0 15.6901 9.63542 20.8464 1.7341 22.3065 0 18.3875 27.7704 9.35006 g 0 0 0 0 0 0 0 39.4416 24.1787 61.5236 98.0347 0 100 4.49536 48.0272 21.5964 t 0 0 0 0 0 0 0 19.5438 15.2244 7.30351 0 77.2079 0 73.7819 20.993 11.0376

M07612_2.00_rc_shift6 (ZNF202_rc)
; positions_6nt_m1 versus M07612_2.00_rc (ZNF202_rc); m=89/218; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.57375; ------GGAsGmGG-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 100 0 0 50 0 0 0 0 c 0 0 0 0 0 0 0 0 0 50 0 50 0 0 0 0 g 0 0 0 0 0 0 100 100 0 50 100 0 100 100 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

M03558_2.00_shift8 (TBX4)
; positions_6nt_m1 versus M03558_2.00 (TBX4); m=90/218; ncol2=8; w=0; offset=2; strand=D; shift=8; score=0.573334; --------AGGTGTgA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 82.0723 12.2214 0.200994 0 0 6.63955 4.01113 85.0173 c 0 0 0 0 0 0 0 0 1.9235 9.2315 0.999683 8.02695 0 12.2389 15.9735 2.68101 g 0 0 0 0 0 0 0 0 10.357 73.9392 98.6248 0.932572 100 1.30137 55.1967 7.9017 t 0 0 0 0 0 0 0 0 5.64726 4.60782 0.174548 91.0405 0 79.8202 24.8187 4.39996

M09474_2.00_shift5 (NEUROD4,NEUROD6)
; positions_6nt_m1 versus M09474_2.00 (NEUROD4,NEUROD6); m=91/218; ncol2=10; w=-1; offset=-1; strand=D; shift=5; score=0.573111; -----rrCAGATGGy- ; cor=; Ncor= a 0 0 0 0 0 54.8 50.8 0.1 99 0.5 72.7 1 0.4 1.7 6.8 0 c 0 0 0 0 0 4.6 22.2 99 0.4 0.8 22.1 0.9 0.4 3.4 51.1 0 g 0 0 0 0 0 35.6 26.5 0.2 0.3 95.2 4.2 0.4 97.7 82.1 10 0 t 0 0 0 0 0 5 0.5 0.7 0.3 3.5 1 97.7 1.5 12.8 32.1 0

M09583_2.00_rc_shift5 (OTP,SEBOX_rc)
; positions_6nt_m1 versus M09583_2.00_rc (OTP,SEBOX_rc); m=92/218; ncol2=10; w=-1; offset=-1; strand=R; shift=5; score=0.572944; -----aGCACGTGGs- ; cor=; Ncor= a 0 0 0 0 0 60 9.9 0.1 92.3 0.1 0.1 8.3 2.3 9.9 12.9 0 c 0 0 0 0 0 14.3 9.6 92.3 2.3 99.7 2.3 5.4 4.9 15.2 26.1 0 g 0 0 0 0 0 19.4 69.6 0.1 2.6 0.1 95 0.1 87.9 68.1 49.3 0 t 0 0 0 0 0 6.3 10.9 7.5 2.8 0.1 2.6 86.2 4.9 6.8 11.6 0

M01030_2.00_rc_shift7 (M01030_2.00_rc)
; positions_6nt_m1 versus M01030_2.00_rc; m=93/218; ncol2=10; w=0; offset=1; strand=R; shift=7; score=0.572862; -------drggTGtsr ; cor=; Ncor= a 0 0 0 0 0 0 0 27.7248 44.7918 20.6116 14.0947 7.45118 19.1985 21.0391 15.3043 45.1124 c 0 0 0 0 0 0 0 17.8558 9.89496 14.6708 7.50672 11.2276 0.167769 18.4744 32.0767 11.6949 g 0 0 0 0 0 0 0 28.5691 25.5855 46.7987 64.4441 0.00287521 72.5905 8.21847 27.8862 28.7649 t 0 0 0 0 0 0 0 25.8504 19.7277 17.9189 13.9545 81.3184 8.04325 52.268 24.7328 14.4278

M01029_2.00_shift8 (M01029_2.00)
; positions_6nt_m1 versus M01029_2.00; m=94/218; ncol2=8; w=0; offset=2; strand=D; shift=8; score=0.56875; --------AGGTGTsA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 87.422 7.51748 0.0222025 0.0222025 0.0217202 0.0222025 0.0285388 87.8994 c 0 0 0 0 0 0 0 0 0.031211 0.024975 0.0222025 0.0222025 0.0217202 2.24245 31.4212 0.0399361 g 0 0 0 0 0 0 0 0 6.27341 92.4326 99.9334 0.0222025 99.9348 0.0222025 48.5445 8.02716 t 0 0 0 0 0 0 0 0 6.27341 0.024975 0.0222025 99.9334 0.0217202 97.7131 20.0057 4.03355

M00833_2.00_shift8 (M00833_2.00)
; positions_6nt_m1 versus M00833_2.00; m=95/218; ncol2=8; w=0; offset=2; strand=D; shift=8; score=0.567643; --------AGGTGTbA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 86.6667 8.77193 1.5625 1.5625 1.5625 3.125 3.77358 85.7143 c 0 0 0 0 0 0 0 0 2.22222 5.26316 1.5625 1.5625 1.5625 4.6875 26.4151 2.38095 g 0 0 0 0 0 0 0 0 8.88889 80.7018 95.3125 1.5625 95.3125 1.5625 39.6226 7.14286 t 0 0 0 0 0 0 0 0 2.22222 5.26316 1.5625 95.3125 1.5625 90.625 30.1887 4.7619

M00938_2.00_rc_shift6 (MAX_rc)
; positions_6nt_m1 versus M00938_2.00_rc (MAX_rc); m=96/218; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.565395; ------gCACGTGG-- ; cor=; Ncor= a 0 0 0 0 0 0 24.4189 0 83.1883 0 16.0333 4.62165 0 8.34127 0 0 c 0 0 0 0 0 0 8.14737 99.9758 0.00763126 77.0833 0.00763126 10.0046 0.00861772 3.58163 0 0 g 0 0 0 0 0 0 47.6639 0.00806192 15.2701 0.00763126 83.9515 0.776684 95.6653 72.5964 0 0 t 0 0 0 0 0 0 19.7699 0.00806192 1.53388 22.9014 0.00763126 84.597 4.31748 15.4807 0 0

M09869_2.00_rc_shift6 (USF1_rc)
; positions_6nt_m1 versus M09869_2.00_rc (USF1_rc); m=97/218; ncol2=8; w=0; offset=0; strand=R; shift=6; score=0.565077; ------rCACGTGr-- ; cor=; Ncor= a 0 0 0 0 0 0 25.9978 0 100 0 8.94632 0 0 27.8204 0 0 c 0 0 0 0 0 0 10.1402 100 0 73.4592 0 0 0 10.2957 0 0 g 0 0 0 0 0 0 38.9428 0 0 8.94632 91.0537 15.9046 100 43.9211 0 0 t 0 0 0 0 0 0 24.9191 0 0 17.5944 0 84.0954 0 17.9628 0 0

M08767_2.00_rc_shift6 (M08767_2.00_rc)
; positions_6nt_m1 versus M08767_2.00_rc; m=98/218; ncol2=7; w=0; offset=0; strand=R; shift=6; score=0.561935; ------GCAGsTG--- ; cor=; Ncor= a 0 0 0 0 0 0 17.7419 0 100 0 0 0 0 0 0 0 c 0 0 0 0 0 0 3.22581 100 0 0 56.4516 0 0 0 0 0 g 0 0 0 0 0 0 75.8065 0 0 100 43.5484 0 100 0 0 0 t 0 0 0 0 0 0 3.22581 0 0 0 0 100 0 0 0 0

M08717_2.00_rc_shift6 (MYF6_rc)
; positions_6nt_m1 versus M08717_2.00_rc (MYF6_rc); m=99/218; ncol2=7; w=0; offset=0; strand=R; shift=6; score=0.561935; ------GCAGsTG--- ; cor=; Ncor= a 0 0 0 0 0 0 17.7419 0 100 0 0 0 0 0 0 0 c 0 0 0 0 0 0 3.22581 100 0 0 56.4516 0 0 0 0 0 g 0 0 0 0 0 0 75.8065 0 0 100 43.5484 0 100 0 0 0 t 0 0 0 0 0 0 3.22581 0 0 0 0 100 0 0 0 0

M03555_2.00_shift8 (TBX15)
; positions_6nt_m1 versus M03555_2.00 (TBX15); m=100/218; ncol2=8; w=0; offset=2; strand=D; shift=8; score=0.561115; --------AGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 92.5123 4.10247 0.180471 0.555404 0 1.22796 0.368602 95.6902 c 0 0 0 0 0 0 0 0 0.651868 0.904694 0.0664894 1.59337 0.076118 3.81545 3.8033 0.646925 g 0 0 0 0 0 0 0 0 5.84919 94.0702 99.753 2.23072 99.9239 2.84186 87.9786 2.78815 t 0 0 0 0 0 0 0 0 0.98661 0.922608 0 95.6205 0 92.1147 7.84954 0.874715

M05949_2.00_rc_shift5 (M05949_2.00_rc)
; positions_6nt_m1 versus M05949_2.00_rc; m=101/218; ncol2=8; w=-1; offset=-1; strand=R; shift=5; score=0.560437; -----rrCAGGTG--- ; cor=; Ncor= a 0 0 0 0 0 27.2727 59.0909 0 100 0 0 0 0 0 0 0 c 0 0 0 0 0 4.54545 0 100 0 0 0 0 5.88235 0 0 0 g 0 0 0 0 0 63.6364 40.9091 0 0 100 100 0 94.1176 0 0 0 t 0 0 0 0 0 4.54545 0 0 0 0 0 100 0 0 0 0

M07903_2.00_rc_shift3 (CTCF_rc)
; positions_6nt_m1 versus M07903_2.00_rc (CTCF_rc); m=102/218; ncol2=13; w=-3; offset=-3; strand=R; shift=3; score=0.559251; ---CCAsyAGrkGGCr ; cor=; Ncor= a 0 0 0 8.58899 0 83.4356 4.7035 15.1329 90.7975 0.6135 48.0573 2.2495 0.6135 14.9284 12.8834 40.2863 c 0 0 0 84.458 100 0.6135 63.8037 43.5583 2.045 0 1.4315 2.6585 0 5.317 72.3927 1.4315 g 0 0 0 2.863 0 10.6339 30.0613 5.726 3.8855 99.3865 49.6933 54.8057 99.3865 74.2331 2.454 55.4192 t 0 0 0 4.09 0 5.317 1.4315 35.5828 3.272 0 0.817999 40.2863 0 5.5215 12.2699 2.863

M07922_2.00_rc_shift3 (CTCF_rc)
; positions_6nt_m1 versus M07922_2.00_rc (CTCF_rc); m=103/218; ncol2=13; w=-3; offset=-3; strand=R; shift=3; score=0.558922; ---CCasyAGrkGGCr ; cor=; Ncor= a 0 0 0 5.9917 0.6198 66.9421 1.6529 11.9835 89.0495 0.4132 40.2893 4.1322 1.4463 10.124 6.405 35.3306 c 0 0 0 86.5702 99.3802 1.2397 63.0165 53.719 2.8926 0 0.2066 2.4793 0 2.0661 85.9504 1.2397 g 0 0 0 2.8926 0 24.7934 34.2975 7.2314 4.9587 99.5868 59.5041 58.8844 98.3471 85.3306 1.4463 61.5702 t 0 0 0 4.5455 0 7.0248 1.0331 27.0661 3.0992 0 0 34.5041 0.2066 2.4793 6.1983 1.8595

M02666_2.00_rc_shift10 (ZNF354C_rc)
; positions_6nt_m1 versus M02666_2.00_rc (ZNF354C_rc); m=104/218; ncol2=6; w=0; offset=4; strand=R; shift=10; score=0.555271; ----------GTGGAk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 68.75 0 c 0 0 0 0 0 0 0 0 0 0 6.25 0 0 0 0 18.75 g 0 0 0 0 0 0 0 0 0 0 93.75 0 100 100 12.5 37.5 t 0 0 0 0 0 0 0 0 0 0 0 100 0 0 18.75 43.75

M08051_2.00_rc_shift4 (MXI1_rc)
; positions_6nt_m1 versus M08051_2.00_rc (MXI1_rc); m=105/218; ncol2=13; w=-2; offset=-2; strand=R; shift=4; score=0.554793; ----sssCACGTGGys ; cor=; Ncor= a 0 0 0 0 21.145 22.6843 13.0165 1.16122 95.6252 0.108021 3.86173 0.729139 0.891169 4.88793 14.1777 14.7718 c 0 0 0 0 28.6524 27.9503 29.9487 95.8682 0.864164 96.3543 1.21523 2.6195 1.45828 13.1245 26.06 32.8382 g 0 0 0 0 35.9168 31.2449 47.8531 2.43046 2.97056 1.5663 94.491 1.29625 96.1113 71.7796 22.3602 30.2998 t 0 0 0 0 14.2857 18.1204 9.18174 0.540103 0.540103 1.97137 0.432082 95.3551 1.53929 10.2079 37.4021 22.0902

M07890_2.00_rc_shift3 (CTCF_rc)
; positions_6nt_m1 versus M07890_2.00_rc (CTCF_rc); m=106/218; ncol2=13; w=-3; offset=-3; strand=R; shift=3; score=0.553563; ---CCAsyAGrkGGCr ; cor=; Ncor= a 0 0 0 7.36199 0 81.3906 3.681 14.7239 89.1615 0.2045 50.5112 2.2495 1.227 14.1104 11.0429 42.9448 c 0 0 0 83.4355 99.7955 2.045 64.8262 42.9448 2.2495 0 0.6135 2.863 0 5.1125 73.6197 0.818 g 0 0 0 4.908 0 10.6339 30.0613 5.5215 5.52149 99.591 48.2618 53.9877 98.364 75.4601 2.2495 53.7832 t 0 0 0 4.2945 0.2045 5.9305 1.4315 36.8098 3.0675 0.2045 0.6135 40.8998 0.409 5.317 13.0879 2.454

M08730_2.00_rc_shift2 (ASCL1_rc)
; positions_6nt_m1 versus M08730_2.00_rc (ASCL1_rc); m=107/218; ncol2=14; w=-4; offset=-4; strand=R; shift=2; score=0.548469; --rrsrGCAGsTGsag ; cor=; Ncor= a 0 0 27.5 27.9167 23.75 49.1667 12.7083 1.45833 98.75 1.04167 2.08333 1.45833 0.833333 9.79167 37.5 19.7917 c 0 0 15.2083 9.79167 27.5 0.625 8.33333 97.7083 0.208333 0.208333 35.8333 0 0.416667 42.7083 16.0417 17.5 g 0 0 40.625 49.1667 38.5417 42.0833 78.125 0.416667 0.208333 97.9167 61.4583 0.416667 98.125 25.4167 24.5833 43.75 t 0 0 16.6667 13.125 10.2083 8.125 0.833333 0.416667 0.833333 0.833333 0.625 98.125 0.625 22.0833 21.875 18.9583

M04317_2.00_shift3 (CREB3L1,CREB3L2)
; positions_6nt_m1 versus M04317_2.00 (CREB3L1,CREB3L2); m=108/218; ncol2=13; w=-3; offset=-3; strand=D; shift=3; score=0.542408; ---bGymyACGTGGCr ; cor=; Ncor= a 0 0 0 9.10853 13.5354 13.0297 37.3614 5.97668 73.9035 0 0 0.589971 0 0 6.03675 53.8339 c 0 0 0 33.5271 14.3434 36.0169 30.9313 49.1254 0 95.7386 0.295858 0 1.17302 0.831025 88.4514 4.95208 g 0 0 0 25.5814 68.0808 15.2542 21.1752 17.7843 20.614 0 99.7041 0 98.827 93.3518 0 29.5527 t 0 0 0 31.7829 4.0404 35.6992 10.5322 27.1137 5.48246 4.26136 0 99.41 0 5.81717 5.51181 11.6613

M09425_2.00_shift4 (TBX21)
; positions_6nt_m1 versus M09425_2.00 (TBX21); m=109/218; ncol2=13; w=-2; offset=-2; strand=D; shift=4; score=0.540433; ----gkgrrGsTGtgr ; cor=; Ncor= a 0 0 0 0 21.4575 21.4575 12.753 32.996 49.1903 19.0283 5.66802 4.8583 0.202429 14.7773 4.25101 60.1215 c 0 0 0 0 20.2429 11.5385 18.6235 10.9312 5.26316 0.809717 29.7571 0.809717 0.202429 12.5506 16.3968 1.82186 g 0 0 0 0 43.9271 31.5789 57.2874 33.4008 32.1862 70.0405 60.1215 0.809717 96.7611 12.1457 61.336 31.7814 t 0 0 0 0 14.3725 35.4251 11.336 22.6721 13.3603 10.1215 4.45344 93.5223 2.83401 60.5263 18.0162 6.2753

M02728_2.00_rc_shift7 (TCF4_rc)
; positions_6nt_m1 versus M02728_2.00_rc (TCF4_rc); m=110/218; ncol2=7; w=0; offset=1; strand=R; shift=7; score=0.539573; -------CAGGTGy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.647821 98.3422 0.0574053 2.40128 0.2936 0.298507 2.85714 0 0 c 0 0 0 0 0 0 0 97.821 0.236827 3.90356 8.96478 0.998238 0 47.9365 0 0 g 0 0 0 0 0 0 0 0.294464 0.769686 95.3502 88.6339 1.1744 99.1642 9.66811 0 0 t 0 0 0 0 0 0 0 1.23675 0.651273 0.688863 0 97.5338 0.537313 39.5382 0 0

M09631_2.00_rc_shift3 (RUNX1_rc)
; positions_6nt_m1 versus M09631_2.00_rc (RUNX1_rc); m=111/218; ncol2=12; w=-3; offset=-3; strand=R; shift=3; score=0.535907; ---rsAGGAwGTGGk- ; cor=; Ncor= a 0 0 0 45.6 23.1 90.4 0.1 0.7 99.7 41.2 0.1 0.1 0.1 0.1 0.1 0 c 0 0 0 10.9 50.6 8.5 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 19.2 0 g 0 0 0 32.8 26.3 0.1 99.7 99.1 0.1 0.1 99.7 0.1 99.7 99.7 26.3 0 t 0 0 0 10.7 0.1 1 0.1 0.1 0.1 58.6 0.1 99.7 0.1 0.1 54.5 0

M05990_2.00_rc_shift4 (M05990_2.00_rc)
; positions_6nt_m1 versus M05990_2.00_rc; m=112/218; ncol2=11; w=-2; offset=-2; strand=R; shift=4; score=0.535454; ----tGwCAksTGbk- ; cor=; Ncor= a 0 0 0 0 4.34783 13.0435 43.4783 0 100 0 0 0 0 0 21.7391 0 c 0 0 0 0 17.3913 13.0435 8.69565 100 0 13.0435 34.7826 0 0 26.087 4.34783 0 g 0 0 0 0 17.3913 73.913 13.0435 0 0 60.8696 65.2174 0 100 26.087 26.087 0 t 0 0 0 0 60.8696 0 34.7826 0 0 26.087 0 100 0 47.8261 47.8261 0

M08744_2.00_shift5 (M08744_2.00)
; positions_6nt_m1 versus M08744_2.00; m=113/218; ncol2=9; w=-1; offset=-1; strand=D; shift=5; score=0.532129; -----rGCAGsTGb-- ; cor=; Ncor= a 0 0 0 0 0 59.519 11.2224 2.40481 99.1984 0.400802 5.41082 0.601202 0.400802 4.60922 0 0 c 0 0 0 0 0 0.801603 1.40281 96.3928 0 0.200401 58.7174 0.200401 0.400802 33.8677 0 0 g 0 0 0 0 0 29.4589 86.7735 1.002 0.400802 97.996 35.2705 0.601202 98.998 35.2705 0 0 t 0 0 0 0 0 10.2204 0.601202 0.200401 0.400802 1.40281 0.601202 98.5972 0.200401 26.2525 0 0

M03988_2.00_shift8 (M03988_2.00)
; positions_6nt_m1 versus M03988_2.00; m=114/218; ncol2=9; w=0; offset=2; strand=D; shift=8; score=0.531411; --------agGTGtgA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 55.3348 17.3118 4.9866 0 0 7.31833 4.17163 72.7312 c 0 0 0 0 0 0 0 0 5.34472 10.3139 2.94906 10.4933 0 14.0419 17.501 5.54913 g 0 0 0 0 0 0 0 0 24.4188 59.3934 89.9553 1.77793 100 13.5635 53.7942 18.4538 t 0 0 0 0 0 0 0 0 14.9016 12.9809 2.10903 87.7288 0 65.0763 24.5332 3.2659

M08738_2.00_shift5 (ATOH1)
; positions_6nt_m1 versus M08738_2.00 (ATOH1); m=115/218; ncol2=9; w=-1; offset=-1; strand=D; shift=5; score=0.528418; -----rrCAGmTGG-- ; cor=; Ncor= a 0 0 0 0 0 53.4 32.4 0.2 99.8 0 58.6 1.8 0.2 3.2 0 0 c 0 0 0 0 0 4.2 15.4 99.6 0 0.8 38 0.6 0 11 0 0 g 0 0 0 0 0 37.8 52.2 0.2 0 97.4 3.4 0.2 99 72.2 0 0 t 0 0 0 0 0 4.6 0 0 0.2 1.8 0 97.4 0.8 13.6 0 0

M08779_2.00_shift5 (M08779_2.00)
; positions_6nt_m1 versus M08779_2.00; m=116/218; ncol2=9; w=-1; offset=-1; strand=D; shift=5; score=0.528418; -----rrCAGmTGG-- ; cor=; Ncor= a 0 0 0 0 0 53.4 32.4 0.2 99.8 0 58.6 1.8 0.2 3.2 0 0 c 0 0 0 0 0 4.2 15.4 99.6 0 0.8 38 0.6 0 11 0 0 g 0 0 0 0 0 37.8 52.2 0.2 0 97.4 3.4 0.2 99 72.2 0 0 t 0 0 0 0 0 4.6 0 0 0.2 1.8 0 97.4 0.8 13.6 0 0

M09407_2.00_shift4 (M09407_2.00)
; positions_6nt_m1 versus M09407_2.00; m=117/218; ncol2=11; w=-2; offset=-2; strand=D; shift=4; score=0.526772; ----cwGCAGsTGks- ; cor=; Ncor= a 0 0 0 0 23.2 27.8 9.6 0.2 99.6 0 1.6 0.6 0 0.4 3.2 0 c 0 0 0 0 41 5.6 15 98.4 0.2 20.2 65.4 0 0.6 17 25.2 0 g 0 0 0 0 23.2 16 74.8 0.6 0.2 79.4 32.6 0 98 32.4 49.4 0 t 0 0 0 0 12.6 50.6 0.6 0.8 0 0.4 0.4 99.4 1.4 50.2 22.2 0

M08710_2.00_rc_shift4 (TCF3_rc)
; positions_6nt_m1 versus M08710_2.00_rc (TCF3_rc); m=118/218; ncol2=11; w=-2; offset=-2; strand=R; shift=4; score=0.526772; ----cwGCAGsTGks- ; cor=; Ncor= a 0 0 0 0 23.2 27.8 9.6 0.2 99.6 0 1.6 0.6 0 0.4 3.2 0 c 0 0 0 0 41 5.6 15 98.4 0.2 20.2 65.4 0 0.6 17 25.2 0 g 0 0 0 0 23.2 16 74.8 0.6 0.2 79.4 32.6 0 98 32.4 49.4 0 t 0 0 0 0 12.6 50.6 0.6 0.8 0 0.4 0.4 99.4 1.4 50.2 22.2 0

M05965_2.00_rc_shift3 (M05965_2.00_rc)
; positions_6nt_m1 versus M05965_2.00_rc; m=119/218; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score=0.525457; ---GgmkCAGGTGbkk ; cor=; Ncor= a 0 0 0 4.34783 13.0435 26.087 13.0435 0 100 0 4.34783 0 0 0 21.7391 17.3913 c 0 0 0 8.69565 21.7391 47.8261 4.34783 95.6522 0 0 4.34783 0 0 30.4348 4.34783 8.69565 g 0 0 0 73.913 43.4783 17.3913 43.4783 4.34783 0 95.6522 91.3043 0 100 26.087 26.087 26.087 t 0 0 0 13.0435 21.7391 8.69565 39.1304 0 0 4.34783 0 100 0 43.4783 47.8261 47.8261

M07709_2.00_rc_shift5 (ZKSCAN5_rc)
; positions_6nt_m1 versus M07709_2.00_rc (ZKSCAN5_rc); m=120/218; ncol2=9; w=-1; offset=-1; strand=R; shift=5; score=0.524932; -----rGGAGGTGA-- ; cor=; Ncor= a 0 0 0 0 0 40.3107 8.35799 0.0739645 99.7781 9.24556 0.0739645 6.8787 1.84911 99.7781 0 0 c 0 0 0 0 0 12.796 0.0739645 0.0739645 0.0739645 0.0739645 0.0739645 5.99112 0.0739645 0.0739645 0 0 g 0 0 0 0 0 32.9142 88.2396 99.7781 0.0739645 90.6065 93.5651 0.0739645 98.003 0.0739645 0 0 t 0 0 0 0 0 13.9792 3.3284 0.0739645 0.0739645 0.0739645 6.28698 87.0562 0.0739645 0.0739645 0 0

M04498_2.00_rc_shift8 (ZBTB7B_rc)
; positions_6nt_m1 versus M04498_2.00_rc (ZBTB7B_rc); m=121/218; ncol2=10; w=0; offset=2; strand=R; shift=8; score=0.522725; --------cGGTGGkC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.6105 6.36732 0.98699 0.135747 0 3.37128 6.6344 6.08379 c 0 0 0 0 0 0 0 0 34.6467 8.72286 0 0 0 0 0.256264 80.4007 g 0 0 0 0 0 0 0 0 22.1014 81.2293 99.013 22.1719 95.8315 96.6287 30.2677 12.1311 t 0 0 0 0 0 0 0 0 23.6413 3.68053 0 77.6923 4.16848 0 62.8417 1.38434

M07889_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07889_2.00_rc (CTCF_rc); m=122/218; ncol2=14; w=-4; offset=-4; strand=R; shift=2; score=0.522703; --gCCAsyAGrkGGCr ; cor=; Ncor= a 0 0 23.6948 7.42969 0 79.3173 3.6145 15.261 91.3654 1.2048 45.5823 4.2169 1.2048 11.6466 10.0402 40.3614 c 0 0 7.6305 84.5381 99.3976 1.6064 61.6466 47.992 1.6064 0 0.803201 2.008 0 3.4137 78.514 1.004 g 0 0 55.2209 4.6185 0 10.6426 33.3333 5.6225 3.2129 98.7952 53.0121 54.6185 98.3936 78.7148 1.2048 55.8234 t 0 0 13.4538 3.4137 0.6024 8.4337 1.4056 31.1245 3.8153 0 0.602401 39.1566 0.4016 6.22489 10.241 2.8112

M07898_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07898_2.00_rc (CTCF_rc); m=123/218; ncol2=14; w=-4; offset=-4; strand=R; shift=2; score=0.520824; --rCCAsyAGrkGGCr ; cor=; Ncor= a 0 0 25.6 7.4 1.4 68 2.4 9.8 91 0.6 39 3.6 2.8 8.8 11.2 33.8 c 0 0 8.2 82.6 98.2 3 57.6 51.8 1 0.4 0.4 3.6 0 3 77.6 1 g 0 0 54.4 5.8 0.2 17.2 39.6 6.2 6.2 98.8 59.4 62.6 97 83.4 1.6 60.8 t 0 0 11.8 4.2 0.2 11.8 0.4 32.2 1.8 0.2 1.2 30.2 0.2 4.8 9.6 4.4

M08737_2.00_shift5 (NEUROD2,NEUROD4,NEUROD6)
; positions_6nt_m1 versus M08737_2.00 (NEUROD2,NEUROD4,NEUROD6); m=124/218; ncol2=9; w=-1; offset=-1; strand=D; shift=5; score=0.520642; -----rrCAGmTGG-- ; cor=; Ncor= a 0 0 0 0 0 46.4 47.2 0.8 100 0 67.8 11.2 0 0.6 0 0 c 0 0 0 0 0 10 9.8 99 0 2.2 28 0.6 0 13.4 0 0 g 0 0 0 0 0 40.6 42.6 0.2 0 95.4 3.2 0.6 95.2 83.4 0 0 t 0 0 0 0 0 3 0.4 0 0 2.4 1 87.6 4.8 2.6 0 0

M07654_2.00_rc_shift2 (ZNF223_rc)
; positions_6nt_m1 versus M07654_2.00_rc (ZNF223_rc); m=125/218; ncol2=14; w=-4; offset=-4; strand=R; shift=2; score=0.519474; --GCCAshAGrkGGmr ; cor=; Ncor= a 0 0 18.1818 0 0 100 0 36.3636 72.7273 18.1818 36.3636 9.0909 0 0 27.2727 54.5455 c 0 0 0 72.7273 100 0 63.6364 36.3636 0 0 0 0 0 0 63.6364 0 g 0 0 81.8182 9.0909 0 0 36.3636 0 18.1818 72.7273 63.6364 54.5455 100 90.9091 9.0909 45.4545 t 0 0 0 18.1818 0 0 0 27.2727 9.0909 9.0909 0 36.3636 0 9.0909 0 0

M09794_2.00_rc_shift3 (TCF3_rc)
; positions_6nt_m1 versus M09794_2.00_rc (TCF3_rc); m=126/218; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score=0.515038; ---vsrGCAGGTGkbc ; cor=; Ncor= a 0 0 0 36.3636 18.1818 27.2727 18.1818 0 100 0 9.09091 0 0 0 9.09091 9.09091 c 0 0 0 36.3636 45.4545 18.1818 0 100 0 0 18.1818 0 0 0 36.3636 54.5455 g 0 0 0 27.2727 36.3636 36.3636 81.8182 0 0 100 72.7273 0 100 36.3636 27.2727 18.1818 t 0 0 0 0 0 18.1818 0 0 0 0 0 100 0 63.6364 27.2727 18.1818

M08748_2.00_rc_shift2 (M08748_2.00_rc)
; positions_6nt_m1 versus M08748_2.00_rc; m=127/218; ncol2=14; w=-4; offset=-4; strand=R; shift=2; score=0.514305; --rrvrGCAGsTGswg ; cor=; Ncor= a 0 0 31.5436 25.0559 26.6219 42.0582 10.0671 0 99.7763 0.894855 1.11857 0 0 7.38255 46.3087 17.0022 c 0 0 14.094 13.8702 32.2148 0 8.2774 99.7763 0.223714 0 55.2573 0 0 53.915 8.72483 16.7785 g 0 0 38.255 50.5593 35.123 46.7562 79.4183 0.223714 0 99.1051 43.6242 0 100 28.6353 19.0157 58.1655 t 0 0 16.1074 10.5145 6.04027 11.1857 2.23714 0 0 0 0 100 0 10.0671 25.9508 8.05369

M07550_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07550_2.00_rc (CTCF_rc); m=128/218; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score=0.513108; --rCCAsyAGrkGGCr ; cor=; Ncor= a 0 0 29.0503 8.9385 0 76.5363 4.4693 17.3184 87.7095 0 39.9441 5.3073 1.676 3.9106 14.5251 49.4413 c 0 0 7.5419 77.6536 100 3.6313 52.7933 41.6201 0.838 0 0 0.838 0 1.9553 71.5084 4.7486 g 0 0 44.9721 6.9832 0 5.3073 40.5028 4.4693 5.5866 99.4413 60.0559 52.7933 98.324 84.6369 3.6313 41.0615 t 0 0 18.4358 6.4246 0 14.5251 2.2346 36.5922 5.8659 0.5587 0 41.0615 0 9.4972 10.3352 4.7486

M08303_2.00_rc_shift3 (SNAI1_rc)
; positions_6nt_m1 versus M08303_2.00_rc (SNAI1_rc); m=129/218; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score=0.512632; ---gsrGCAGGTGCag ; cor=; Ncor= a 0 0 0 16.129 16.5899 50.2304 19.8157 0 99.5392 1.8433 0 0 0 2.765 45.1613 15.2074 c 0 0 0 24.8848 35.9447 12.4424 0 100 0 0 2.3041 0 0 68.2028 20.7373 18.894 g 0 0 0 46.5438 28.5714 29.4931 76.0369 0 0.4608 98.1567 97.6959 0 100 17.0507 16.5899 42.8571 t 0 0 0 12.4424 18.894 7.8341 4.1475 0 0 0 0 100 0 11.9816 17.5115 23.0415

M10813_2.00_rc_shift7 (PAX4_rc)
; positions_6nt_m1 versus M10813_2.00_rc (PAX4_rc); m=130/218; ncol2=12; w=0; offset=1; strand=R; shift=7; score=0.510043; -------vGGGTGrrg ; cor=; Ncor= a 0 0 0 0 0 0 0 25 5.88235 11.7647 0 5.88235 0 35.2941 29.4118 23.5294 c 0 0 0 0 0 0 0 37.5 17.6471 0 11.7647 0 5.88235 0 5.88235 17.6471 g 0 0 0 0 0 0 0 37.5 70.5882 70.5882 82.3529 0 88.2353 52.9412 41.1765 35.2941 t 0 0 0 0 0 0 0 0 5.88235 17.6471 5.88235 94.1176 5.88235 11.7647 23.5294 23.5294

M07918_2.00_rc_shift3 (CTCF_rc)
; positions_6nt_m1 versus M07918_2.00_rc (CTCF_rc); m=131/218; ncol2=14; w=-3; offset=-3; strand=R; shift=3; score=0.50775; ---CCrsyAGrkGGCR ; cor=; Ncor= a 0 0 0 6.16019 0.2053 64.4764 1.6427 10.4723 87.4743 0 39.0144 5.5441 1.232 10.883 6.36551 27.9261 c 0 0 0 87.0636 99.7947 1.6427 64.271 54.4148 3.4908 0 0.2053 3.4908 0 2.6694 86.4477 1.0267 g 0 0 0 3.4908 0 25.8727 33.2649 8.4189 6.1602 100 60.7803 61.807 98.768 83.3675 2.2587 70.2258 t 0 0 0 3.2854 0 8.0082 0.8214 26.694 2.8747 0 0 29.1581 0 3.0801 4.9281 0.821399

M06087_2.00_rc_shift2 (M06087_2.00_rc)
; positions_6nt_m1 versus M06087_2.00_rc; m=132/218; ncol2=13; w=-4; offset=-4; strand=R; shift=2; score= 0.5037; --tkCAACAGGTGgy- ; cor=; Ncor= a 0 0 21.8069 10.5919 2.18069 80.3738 99.0654 1.24611 97.8193 4.36137 0.623053 0.311526 7.47664 6.71141 4.98084 0 c 0 0 22.7414 6.85358 85.6698 10.5919 0 98.7539 1.24611 0 0 0.934579 3.42679 11.0738 25.6705 0 g 0 0 17.134 44.2368 0.934579 0.311526 0 0 0.623053 95.6386 99.3769 0 81.9315 61.745 22.6054 0 t 0 0 38.3178 38.3178 11.215 8.72274 0.934579 0 0.311526 0 0 98.7539 7.16511 20.4698 46.7433 0

M07884_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07884_2.00_rc (CTCF_rc); m=133/218; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score=0.500487; --gCCAsyAGrkGGCr ; cor=; Ncor= a 0 0 21.8437 8.41681 1.8036 72.5451 3.6072 14.0281 90.1804 0 39.0782 4.6092 1.4028 9.21841 10.02 37.0741 c 0 0 5.6112 82.3648 97.996 1.4028 61.3227 50.3006 2.2044 0 0.2004 2.4048 0 3.006 76.1524 0.801601 g 0 0 56.3126 5.41081 0 14.6293 33.6673 6.6132 5.2104 99.1984 60.1202 55.3106 98.5972 83.5672 2.004 61.1223 t 0 0 16.2325 3.8076 0.2004 11.4228 1.4028 29.0581 2.4048 0.8016 0.6012 37.6754 0 4.2084 11.8236 1.002

M02929_2.00_shift1 (SCRT1)
; positions_6nt_m1 versus M02929_2.00 (SCRT1); m=134/218; ncol2=15; w=-5; offset=-5; strand=D; shift=1; score=0.500197; -rwKCAACAGGTGkty ; cor=; Ncor= a 0 35.6495 39.1681 1.5083 0.473934 94.6606 100 0.0665779 100 11.4527 0 0 8.78494 7.34672 14.9123 21.9055 c 0 12.6133 17.591 2.01106 97.9689 3.16742 0 99.9334 0 0.180832 0 0.262927 2.39589 11.4693 24.0829 25.8143 g 0 43.3535 7.71231 70.3871 0.203114 0 0 0 0 88.0651 99.8774 0.175285 74.2727 54.6512 23.764 9.60912 t 0 8.38369 35.5286 26.0935 1.3541 2.17195 0 0 0 0.301386 0.122624 99.5618 14.5465 26.5328 37.2408 42.671

M07893_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07893_2.00_rc (CTCF_rc); m=135/218; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score=0.499721; --rCCAsyAGrkGGCr ; cor=; Ncor= a 0 0 26.7068 8.23291 0.4016 82.3294 1.8072 12.8514 87.5502 0.8032 43.7751 1.8072 1.2048 7.63051 6.2249 49.5984 c 0 0 7.42971 83.3334 99.5984 1.4056 63.0523 48.5944 0.8032 0 0.4016 2.4096 0.2008 2.2088 80.3213 1.6064 g 0 0 52.2089 2.8112 0 8.83531 33.5341 6.4257 7.8313 97.992 55.6225 49.1968 97.7912 83.9358 2.6104 46.988 t 0 0 13.6546 5.62251 0 7.42971 1.6064 32.1285 3.8153 1.2048 0.2008 46.5863 0.8032 6.22491 10.8434 1.8072

M07921_2.00_rc_shift1 (CTCF_rc)
; positions_6nt_m1 versus M07921_2.00_rc (CTCF_rc); m=136/218; ncol2=15; w=-5; offset=-5; strand=R; shift=1; score=0.499558; -ggCCAscAGrkGGCr ; cor=; Ncor= a 0 11.8 20.6 7 0.4 77.6 2 10.2 86 0 39.4 4 0.2 8 6.8 40 c 0 18.8 6.6 82.4 99.6 0 58 54.4 3.6 0.4 0.4 4.6 0 4.2 85.4 1.2 g 0 51.6 61.6 6.2 0 16.8 38.4 11 6.6 98.4 59.8 50.8 99.4 82.4 1 57.8 t 0 17.8 11.2 4.4 0 5.6 1.6 24.4 3.8 1.2 0.4 40.6 0.4 5.4 6.8 1

M02914_2.00_rc_shift7 (ZBTB7A_rc)
; positions_6nt_m1 versus M02914_2.00_rc (ZBTB7A_rc); m=137/218; ncol2=12; w=0; offset=1; strand=R; shift=7; score=0.499093; -------tcGGTGGTC ; cor=; Ncor= a 0 0 0 0 0 0 0 10.8571 18.0791 5 0 3.07692 2.6178 1.11732 3.49345 0 c 0 0 0 0 0 0 0 20 49.7175 3.75 0 0 3.14136 0 0.436681 89.3939 g 0 0 0 0 0 0 0 21.1429 15.8192 73.75 100 6.15385 92.6702 98.8827 18.7773 0 t 0 0 0 0 0 0 0 48 16.3842 17.5 0 90.7692 1.57068 0 77.2926 10.6061

M08022_2.00_rc_shift3 (M08022_2.00_rc)
; positions_6nt_m1 versus M08022_2.00_rc; m=138/218; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score=0.497622; ---CCAsyAGrkGGCr ; cor=; Ncor= a 0 0 0 7.196 0.7444 85.1117 5.7072 20.8437 96.0297 0 42.6799 3.4739 0.9926 7.6923 15.6328 43.1762 c 0 0 0 87.5931 99.2556 1.2407 54.8387 38.4615 0.992599 0.2481 0.4963 1.9851 0 0.9926 75.4342 0.2481 g 0 0 0 1.9851 0 4.7146 39.206 4.7146 1.9851 99.5038 56.3275 59.0571 98.263 86.1042 0.7444 53.598 t 0 0 0 3.2258 0 8.933 0.2481 35.9801 0.992599 0.2481 0.4963 35.4839 0.7444 5.2109 8.1886 2.9777

M07912_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07912_2.00_rc (CTCF_rc); m=139/218; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score=0.497016; --rCCAsyAGrkGGCr ; cor=; Ncor= a 0 0 28.4 9 0.2 80 2 15.4 87 0.6 40.6 2.4 0.8 7.8 9.8 41.2 c 0 0 6.6 81.2 99.6 1.4 64.8 47.6 3 0.2 0.6 1.8 0.2 3 76.8 1.4 g 0 0 53.2 6 0.2 11.8 31 8.6 5.6 99 58.4 56.6 98.8 83 2.8 55.4 t 0 0 11.8 3.8 0 6.8 2.2 28.4 4.4 0.2 0.4 39.2 0.2 6.2 10.6 2

M04497_2.00_rc_shift8 (ZBTB7B_rc)
; positions_6nt_m1 versus M04497_2.00_rc (ZBTB7B_rc); m=140/218; ncol2=10; w=0; offset=2; strand=R; shift=8; score=0.49683; --------cGGTGGTC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 18.797 3.5617 0 0 0 0.386567 3.97646 1.63201 c 0 0 0 0 0 0 0 0 38.2731 5.44731 0 0 0 0 0 92.1753 g 0 0 0 0 0 0 0 0 23.8176 86.3817 99.5894 24.9393 99.7339 99.6134 22.5036 1.52023 t 0 0 0 0 0 0 0 0 19.1123 4.60926 0.410628 75.0607 0.266086 0 73.52 4.67248

M07914_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07914_2.00_rc (CTCF_rc); m=141/218; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score=0.496669; --gCCAsyAGrkGGCr ; cor=; Ncor= a 0 0 23.0461 6.01201 1.8036 75.7515 3.2064 13.6273 89.5792 0 43.487 3.006 1.002 4.008 9.61921 43.0862 c 0 0 8.2164 82.3648 97.5952 1.002 61.5231 50.1002 0.8016 0 0.2004 2.2044 0 1.4028 80.7616 1.6032 g 0 0 54.3086 7.41481 0.4008 13.8277 34.2685 6.4128 5.6112 100 56.1122 54.7094 98.5972 88.1764 1.6032 52.1042 t 0 0 14.4289 4.2084 0.2004 9.4188 1.002 29.8597 4.008 0 0.2004 40.0802 0.4008 6.4128 8.01601 3.2064

M07872_2.00_rc_shift3 (CTCF_rc)
; positions_6nt_m1 versus M07872_2.00_rc (CTCF_rc); m=142/218; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score=0.492612; ---CCAsyAGrkGGCr ; cor=; Ncor= a 0 0 0 5.70261 0.8147 78.2077 2.8513 13.8493 85.3361 0.611 41.9552 3.055 1.222 7.5356 7.7393 45.6212 c 0 0 0 84.5215 99.1853 0.2037 62.7291 48.6762 2.8513 0 0.2037 3.666 0 3.055 82.6884 0.611 g 0 0 0 5.09161 0 15.6823 33.1976 7.1283 7.73931 98.778 57.6374 51.7311 98.167 81.4664 1.6293 52.7495 t 0 0 0 4.6843 0 5.9063 1.222 30.3462 4.0733 0.611 0.2037 41.5479 0.611 7.943 7.943 1.0183

M07917_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07917_2.00_rc (CTCF_rc); m=143/218; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score=0.492315; --rCCAsyAGrkGGCr ; cor=; Ncor= a 0 0 27.1967 9.6234 0.4184 80.1256 2.9289 13.8075 89.5397 0.2092 47.6987 3.7657 1.4644 11.7155 10.6695 41.0042 c 0 0 6.69459 82.2176 99.5816 1.2552 61.9246 42.4686 2.7197 0 1.6736 3.3473 0.4184 3.9749 75.523 0.2092 g 0 0 50.8367 4.3933 0 10.0418 32.8452 6.2762 4.6025 99.3724 50.6277 50.4184 98.1172 79.7071 1.8828 55.6485 t 0 0 15.272 3.7657 0 8.57741 2.3013 37.4477 3.1381 0.4184 0 42.4686 0 4.6025 11.9247 3.1381

M07924_2.00_rc_shift3 (CTCF_rc)
; positions_6nt_m1 versus M07924_2.00_rc (CTCF_rc); m=144/218; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score=0.491181; ---CCAsyAGrkGGCr ; cor=; Ncor= a 0 0 0 8.9431 0 69.7155 2.6423 9.5528 89.6342 0 42.6829 1.2195 1.2195 2.8455 7.92681 37.3984 c 0 0 0 78.6585 100 0.813001 62.1951 56.3008 2.0325 0 0.4065 1.4228 0.2033 1.4228 84.9594 1.8293 g 0 0 0 6.9106 0 19.5122 34.1463 8.1301 4.878 99.5935 56.9106 58.5366 98.5772 90.0406 1.2195 57.5203 t 0 0 0 5.4878 0 9.95931 1.0163 26.0163 3.4553 0.4065 0 38.8211 0 5.69109 5.89431 3.252

M07896_2.00_rc_shift3 (CTCF_rc)
; positions_6nt_m1 versus M07896_2.00_rc (CTCF_rc); m=145/218; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score=0.490946; ---CCAsyAGrkGGCr ; cor=; Ncor= a 0 0 0 9.3117 0 68.4211 3.0364 12.1457 91.0932 0 39.8785 3.0364 0.6073 3.0364 7.69231 37.247 c 0 0 0 78.3401 100 2.2267 60.1215 55.2632 1.6194 0 0 1.2146 0.2024 1.417 85.6276 1.6194 g 0 0 0 6.2753 0 17.6113 35.0202 7.4899 5.06071 100 60.1215 60.5263 98.3806 89.2713 1.0121 58.0972 t 0 0 0 6.0729 0 11.7409 1.8219 25.1012 2.2267 0 0 35.2227 0.8097 6.2753 5.66801 3.0364

M07897_2.00_rc_shift3 (CTCF_rc)
; positions_6nt_m1 versus M07897_2.00_rc (CTCF_rc); m=146/218; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score=0.490217; ---CCAsyAGrkGGCr ; cor=; Ncor= a 0 0 0 10.664 0.6036 85.1106 1.4085 17.9074 91.3481 1.2072 48.8934 4.829 1.006 10.664 12.2736 49.6982 c 0 0 0 79.8792 99.1952 0 63.5814 34.6076 0.8048 0 0.6036 1.006 0 3.4205 75.654 1.4085 g 0 0 0 4.2254 0.2012 7.44469 32.5956 3.4205 4.829 98.3904 49.6982 46.4789 98.994 75.8551 0.603601 46.2777 t 0 0 0 5.23139 0 7.44469 2.4145 44.0644 3.0181 0.4024 0.8048 47.6861 0 10.0604 11.4688 2.6157

M07892_2.00_rc_shift3 (CTCF_rc)
; positions_6nt_m1 versus M07892_2.00_rc (CTCF_rc); m=147/218; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score=0.48842; ---CCAsyAGrkGGCr ; cor=; Ncor= a 0 0 0 5.0633 1.4768 73.2068 5.06329 14.7679 90.0844 0 43.2489 3.3755 1.0549 5.27429 14.346 41.3502 c 0 0 0 85.865 98.5232 3.3755 67.2995 45.5696 0.8439 0 0.843901 0.6329 0 5.06329 74.8945 1.6878 g 0 0 0 4.2194 0 11.6034 25.9494 3.5865 5.4852 98.9451 55.4853 57.384 98.3122 83.1223 2.7426 54.0084 t 0 0 0 4.8523 0 11.8143 1.6878 36.0759 3.5865 1.0549 0.4219 38.6076 0.6329 6.54009 8.0169 2.9536

M07870_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07870_2.00_rc (CTCF_rc); m=148/218; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score=0.488324; --gCCAsyAGrkGGCr ; cor=; Ncor= a 0 0 20.7039 7.0393 0 74.7411 2.6915 9.3168 89.4409 0.4141 43.2712 2.2774 0 5.59009 12.8364 36.2319 c 0 0 7.86751 86.1284 100 1.8634 64.3893 51.7598 2.8986 0 0.4141 2.0704 0.6211 2.4845 78.882 2.2774 g 0 0 58.5922 2.6915 0 14.6998 32.7122 7.6605 5.59009 99.5859 55.9006 59.2133 99.3789 85.3001 1.8634 58.5921 t 0 0 12.8364 4.1408 0 8.69569 0.207 31.2629 2.0704 0 0.4141 36.4389 0 6.62529 6.4182 2.8986

M07925_2.00_rc_shift3 (CTCF_rc)
; positions_6nt_m1 versus M07925_2.00_rc (CTCF_rc); m=149/218; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score=0.487213; ---CCAsyAGrkGGCr ; cor=; Ncor= a 0 0 0 6.10999 0.611 72.0978 1.222 10.998 89.4094 0 37.4745 4.4807 1.0183 8.1466 10.1833 37.2709 c 0 0 0 86.1506 99.389 1.833 62.9328 53.3604 0.8147 0 0 3.055 0 4.4807 82.6884 3.055 g 0 0 0 3.8697 0 15.8859 34.6232 7.94299 6.9246 100 61.5072 60.2851 98.9817 83.7067 1.6293 58.0448 t 0 0 0 3.8697 0 10.1833 1.222 27.6986 2.8513 0 1.0183 32.1792 0 3.666 5.499 1.6293

M05827_2.00_shift3 (XPA)
; positions_6nt_m1 versus M05827_2.00 (XPA); m=150/218; ncol2=11; w=-3; offset=-3; strand=D; shift=3; score=0.484204; ---gtGTGAGGTgg-- ; cor=; Ncor= a 0 0 0 22.625 6.5233 0 7.00935 5.3066 68.5518 1.77976 0 4.02098 10.9532 11.625 0 0 c 0 0 0 10.125 12.4731 0 7.38318 0 14.2245 4.78309 0 8.12937 12.2074 23.25 0 0 g 0 0 0 54.5 23.6559 100 10.8411 94.3396 5.65553 88.9878 99.3789 17.9196 66.8896 43.125 0 0 t 0 0 0 12.75 57.3477 0 74.7664 0.353774 11.5681 4.44939 0.621118 69.9301 9.94983 22 0 0

M07881_2.00_rc_shift1 (CTCF_rc)
; positions_6nt_m1 versus M07881_2.00_rc (CTCF_rc); m=151/218; ncol2=15; w=-5; offset=-5; strand=R; shift=1; score=0.483228; -ggCCAsyAGrkGGCr ; cor=; Ncor= a 0 16.39 19.917 8.29879 0 71.5767 2.0747 8.71371 89.4191 0 40.4564 2.2822 0 9.5436 6.84649 35.6846 c 0 16.805 8.5062 82.9875 100 0.829899 64.9378 57.6764 1.4523 0 0.622401 2.4896 0.4149 3.9419 84.0248 1.4523 g 0 48.5477 57.4689 5.18669 0 20.1245 31.9502 7.67631 5.3942 100 57.8839 58.2987 99.5851 81.3278 0.829899 62.2407 t 0 18.2573 14.1079 3.527 0 7.46889 1.0373 25.9336 3.7344 0 1.0373 36.9295 0 5.1867 8.29879 0.6224

M07885_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07885_2.00_rc (CTCF_rc); m=152/218; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score=0.483149; --gCCascAGrkGGCr ; cor=; Ncor= a 0 0 21.2 8.6 1.2 62.6 3.6 13.6 92.4 0 38.4 4.8 1.8 2.4 10.2 31.2 c 0 0 7.8 82.6 98.2 2.8 60 53.8 1 0 0.2 1.6 0.2 1.4 82.6 1.8 g 0 0 55.2 5 0.2 19 34.4 8 4.2 100 61.4 66.8 98 91.6 1.4 64.2 t 0 0 15.8 3.8 0.4 15.6 2 24.6 2.4 0 0 26.8 0 4.6 5.8 2.8

M08723_2.00_shift4 (MAX)
; positions_6nt_m1 versus M08723_2.00 (MAX); m=153/218; ncol2=10; w=-2; offset=-2; strand=D; shift=4; score=0.482771; ----rrgCACGTGg-- ; cor=; Ncor= a 0 0 0 0 29.8 41.6 9 1.8 93.8 0.2 8.8 10.6 0.2 13.8 0 0 c 0 0 0 0 24 13.8 24.6 98 0.4 82.6 1.4 11.8 0.4 8.8 0 0 g 0 0 0 0 38.4 30.8 62.2 0 5.4 9.4 89.2 0.6 98.6 63 0 0 t 0 0 0 0 7.8 13.8 4.2 0.2 0.4 7.8 0.6 77 0.8 14.4 0 0

M07923_2.00_rc_shift1 (CTCF_rc)
; positions_6nt_m1 versus M07923_2.00_rc (CTCF_rc); m=154/218; ncol2=15; w=-5; offset=-5; strand=R; shift=1; score=0.482027; -ggCCAsyAGrkGGCr ; cor=; Ncor= a 0 13.7214 21.2058 5.6133 0 72.3493 1.8711 9.7713 93.9709 0 42.8274 3.9501 1.0395 8.1081 8.1081 36.3825 c 0 17.8794 9.7713 84.1996 100 1.6632 65.6965 55.3015 1.2474 0 0.6237 1.6632 0.4158 2.7027 82.9522 1.8711 g 0 50.9356 57.3805 5.4054 0 20.5821 31.6008 6.6528 4.7817 100 55.7173 59.8753 98.3368 84.8233 3.1185 59.8753 t 0 17.4636 11.6424 4.7817 0 5.4054 0.8316 28.2744 0 0 0.8316 34.5114 0.2079 4.3659 5.8212 1.8711

M07919_2.00_rc_shift3 (CTCF_rc)
; positions_6nt_m1 versus M07919_2.00_rc (CTCF_rc); m=155/218; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score=0.481725; ---CCAsyAGrkGGCr ; cor=; Ncor= a 0 0 0 7.3222 0 71.3389 3.7657 11.2971 89.1213 0 42.4686 3.7657 1.046 9.41421 7.3222 38.9121 c 0 0 0 82.8452 99.7908 2.0921 62.1339 50.4184 2.3013 0 0.6276 3.7657 0 4.8117 82.4268 1.2552 g 0 0 0 4.6025 0 18.41 32.8452 6.0669 5.6485 100 56.2762 57.5314 98.954 80.9624 1.6736 59.6235 t 0 0 0 5.2301 0.2092 8.159 1.2552 32.2176 2.9289 0 0.6276 34.9372 0 4.8117 8.5774 0.2092

M07864_2.00_rc_shift3 (CTCF_rc)
; positions_6nt_m1 versus M07864_2.00_rc (CTCF_rc); m=156/218; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score=0.479827; ---CCAsyAGrkGGCr ; cor=; Ncor= a 0 0 0 8.81761 0 77.3547 3.6072 13.8277 90.7816 0 44.6894 4.008 1.002 16.8337 9.61921 37.8758 c 0 0 0 81.964 99.1984 2.004 62.1243 46.493 1.002 0 1.002 2.4048 0 4.6092 77.956 0.8016 g 0 0 0 4.008 0 12.6253 32.4649 5.6112 4.6092 100 53.3066 57.1143 98.998 73.5471 2.004 58.1162 t 0 0 0 5.21041 0.8016 8.016 1.8036 34.0681 3.6072 0 1.002 36.4729 0 5.01 10.4208 3.2064

M08289_2.00_rc_shift3 (CTCF_rc)
; positions_6nt_m1 versus M08289_2.00_rc (CTCF_rc); m=157/218; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score=0.479721; ---CCrscAGGgGGCG ; cor=; Ncor= a 0 0 0 4.66954 3.23276 43.1753 3.80747 5.81897 78.8075 0.359195 21.6236 5.53161 2.9454 0.646552 6.39368 13.2902 c 0 0 0 73.9224 90.0144 5.53161 46.3362 62.4282 5.81897 0.933908 0.359195 10.4167 0.359195 2.08333 89.1523 0.0718391 g 0 0 0 17.3132 6.39368 35.1293 49.2098 14.727 12.1408 98.6351 77.9454 65.0144 96.0489 96.0489 1.50862 84.5546 t 0 0 0 4.09483 0.359195 16.1638 0.646552 17.0259 3.23276 0.0718391 0.0718391 19.0374 0.646552 1.22126 2.9454 2.08333

M05963_2.00_rc_shift3 (M05963_2.00_rc)
; positions_6nt_m1 versus M05963_2.00_rc; m=158/218; ncol2=10; w=-3; offset=-3; strand=R; shift=3; score=0.479632; ---GGhkCAGGTG--- ; cor=; Ncor= a 0 0 0 9.09091 8.33333 33.3333 0 0 100 0 0 0 0 0 0 0 c 0 0 0 9.09091 0 33.3333 0 100 0 0 0 0 0 0 0 0 g 0 0 0 72.7273 83.3333 8.33333 66.6667 0 0 100 100 0 100 0 0 0 t 0 0 0 9.09091 8.33333 25 33.3333 0 0 0 0 100 0 0 0 0

M07877_2.00_rc_shift3 (CTCF_rc)
; positions_6nt_m1 versus M07877_2.00_rc (CTCF_rc); m=159/218; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score=0.479376; ---CCAsyAGrkGGCr ; cor=; Ncor= a 0 0 0 6.63981 0 69.014 2.0121 10.0604 90.9457 0.2012 38.4306 2.6157 0.4024 13.4809 7.4447 33.1992 c 0 0 0 86.7204 99.7988 2.6157 65.5936 56.7404 1.8109 0.4024 0.4024 5.835 0 3.4205 83.501 1.4085 g 0 0 0 3.2193 0.2012 20.9256 31.5895 4.829 6.2374 98.7928 60.3622 58.5513 99.3964 79.0745 2.2133 63.3802 t 0 0 0 3.4205 0 7.44469 0.8048 28.3702 1.006 0.6036 0.8048 32.998 0.2012 4.0241 6.841 2.0121

M04567_2.00_rc_shift1 (ZIC4_rc)
; positions_6nt_m1 versus M04567_2.00_rc (ZIC4_rc); m=160/218; ncol2=15; w=-5; offset=-5; strand=R; shift=1; score=0.47845; -kCACaGyrGGkGGym ; cor=; Ncor= a 0 21.0845 20.5451 71.0336 0 50.9667 24.8639 0 50.6636 0.485695 0 17.3432 4.16494 4.37107 0 34.879 c 0 6.05108 69.5215 2.59327 96.229 20.6617 2.29429 63.9494 0 0.518962 0.0862204 1.24368 3.23094 0 31.384 36.608 g 0 42.5383 9.84092 8.33639 0 19.3807 72.3363 0 47.4893 74.6773 99.5375 47.4853 78.608 86.8868 14.7382 24.1591 t 0 30.3261 0.0924898 18.0367 3.77096 8.99088 0.505522 36.0506 1.84711 24.318 0.376235 33.9278 13.9961 8.74214 53.8777 4.35398

M07902_2.00_rc_shift3 (CTCF_rc)
; positions_6nt_m1 versus M07902_2.00_rc (CTCF_rc); m=161/218; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score=0.478368; ---CCAsyAGrkGGCr ; cor=; Ncor= a 0 0 0 9.01801 0 80.7616 4.008 13.4269 93.1864 1.002 46.8938 3.4068 2.2044 14.8297 14.4289 43.2866 c 0 0 0 80.962 99.5992 1.6032 63.1263 44.2886 1.8036 0 1.002 2.004 0 4.4088 72.7455 1.4028 g 0 0 0 4.2084 0 9.81961 31.4629 3.8076 2.4048 98.998 51.1022 57.5151 97.7956 73.9479 1.002 52.3046 t 0 0 0 5.81161 0.4008 7.81561 1.4028 38.477 2.6052 0 1.002 37.0741 0 6.8136 11.8236 3.006

M07886_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07886_2.00_rc (CTCF_rc); m=162/218; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score=0.477193; --gCCAsyAGrkGGCr ; cor=; Ncor= a 0 0 22.379 5.8468 0 73.7903 3.0242 12.5 91.5322 0 44.3548 3.4274 0.604801 11.2903 9.87901 36.0887 c 0 0 5.44351 86.4919 99.7984 2.0161 64.1129 53.2258 1.4113 0 1.0081 2.8226 0.2016 4.6371 79.8388 1.0081 g 0 0 60.6856 3.629 0 18.1452 31.6532 6.25 6.24999 100 54.0323 60.0806 98.992 79.2339 2.2177 61.2903 t 0 0 11.4919 4.0323 0.2016 6.0484 1.2097 28.0242 0.806499 0 0.6048 33.6694 0.2016 4.8387 8.06451 1.6129

M05828_2.00_rc_shift3 (XPA_rc)
; positions_6nt_m1 versus M05828_2.00_rc (XPA_rc); m=163/218; ncol2=11; w=-3; offset=-3; strand=R; shift=3; score=0.477073; ---gTGTGAGGTGs-- ; cor=; Ncor= a 0 0 0 20.0565 0 3.0137 0 9.56938 74.5263 1.28535 7.32984 6.94444 0 14.1643 0 0 c 0 0 0 16.6667 10.1449 0 7.8125 0 8.21053 7.71208 0 12.8968 12.9237 27.762 0 0 g 0 0 0 47.4576 16.5631 96.9863 0 84.689 15.7895 91.0026 92.6702 9.92063 75 47.3088 0 0 t 0 0 0 15.8192 73.2919 0 92.1875 5.74163 1.47368 0 0 70.2381 12.0763 10.7649 0 0

M07869_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07869_2.00_rc (CTCF_rc); m=164/218; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score=0.476635; --gCCasyAGrkGGCr ; cor=; Ncor= a 0 0 19.8 6.2 0.2 67.2 2.2 10.8 91 0 38.8 4.2 0.8 11.2 11.8 31.2 c 0 0 6.6 85.6 99 2.4 62.2 53 1.8 0 1.2 3.2 0.4 5 80.4 2.4 g 0 0 60.2 3.4 0 21.4 33.6 7.4 5 99.8 59.2 64.4 98.2 80.4 2.6 65.2 t 0 0 13.4 4.8 0.8 9 2 28.8 2.2 0.2 0.8 28.2 0.6 3.4 5.2 1.2

M07913_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07913_2.00_rc (CTCF_rc); m=165/218; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score=0.47503; --gCCasyAGrkGGCr ; cor=; Ncor= a 0 0 21.4 6.6 1.2 67.8 1.2 8 89.2 0 38.8 2.2 0.6 10.2 9.6 30.8 c 0 0 7.8 84.4 97.6 4.2 62.2 54.6 1 0.2 0.2 4 0 5.6 79.6 2.4 g 0 0 58.4 6.2 0.4 20 34.8 9.4 6.2 99.8 60.6 67.4 99.4 80.2 4.4 64.2 t 0 0 12.4 2.8 0.8 8 1.8 28 3.6 0 0.4 26.4 0 4 6.4 2.6

M11433_2.00_shift6 (SPZ1)
; positions_6nt_m1 versus M11433_2.00 (SPZ1); m=166/218; ncol2=15; w=0; offset=0; strand=D; shift=6; score=0.474427; ------dsmGGrGGgw ; cor=; Ncor= a 0 0 0 0 0 0 28.5714 16.6667 37.037 0 0 40 0 0 6.66667 33.3333 c 0 0 0 0 0 0 0 33.3333 29.6296 13.3333 6.66667 6.66667 13.3333 16.6667 10 10 g 0 0 0 0 0 0 42.8571 29.1667 14.8148 86.6667 93.3333 36.6667 86.6667 83.3333 66.6667 0 t 0 0 0 0 0 0 28.5714 20.8333 18.5185 0 0 16.6667 0 0 16.6667 56.6667

M07866_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07866_2.00_rc (CTCF_rc); m=167/218; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score=0.474336; --gCCAsyAGrkGGCr ; cor=; Ncor= a 0 0 23.1855 7.25809 0 77.0162 3.629 14.9194 91.5322 0 49.3952 3.4274 1.4113 13.7097 10.2823 39.7177 c 0 0 5.0403 83.6693 99.7984 1.6129 61.492 48.7903 1.6129 0 0.806499 2.8226 0 3.629 79.8387 1.4113 g 0 0 58.2661 4.2339 0 14.7177 33.2661 4.6371 4.2339 100 48.7903 57.6613 98.1855 78.629 2.2177 56.8549 t 0 0 13.5081 4.8387 0.2016 6.65321 1.6129 31.6532 2.621 0 1.0081 36.0887 0.4032 4.0323 7.6613 2.0161

M07909_2.00_rc_shift3 (CTCF_rc)
; positions_6nt_m1 versus M07909_2.00_rc (CTCF_rc); m=168/218; ncol2=15; w=-3; offset=-3; strand=R; shift=3; score=0.474216; ---CCAstAGrkGGcr ; cor=; Ncor= a 0 0 0 12.4748 0.8048 89.9397 4.2254 15.0905 91.7505 1.4085 61.167 5.83501 0 10.0604 12.6761 54.1247 c 0 0 0 75.8552 99.1952 0 65.7947 18.3099 1.4085 0 0.4024 1.006 0 3.4205 66.1972 2.4145 g 0 0 0 3.4205 0 3.4205 25.7545 2.2133 3.2193 98.1891 38.2294 34.2052 100 73.0382 0.6036 40.6439 t 0 0 0 8.24951 0 6.63981 4.2254 64.3863 3.6217 0.4024 0.2012 58.9538 0 13.4809 20.5231 2.8169

M05964_2.00_rc_shift2 (M05964_2.00_rc)
; positions_6nt_m1 versus M05964_2.00_rc; m=169/218; ncol2=12; w=-4; offset=-4; strand=R; shift=2; score=0.473575; --GGkckCAGRTGk-- ; cor=; Ncor= a 0 0 6.25 5.88235 11.7647 11.7647 5.88235 0 100 0 29.4118 0 0 0 0 0 c 0 0 6.25 0 11.7647 64.7059 11.7647 100 0 0 0 0 0 12.5 0 0 g 0 0 68.75 70.5882 47.0588 11.7647 41.1765 0 0 94.1176 70.5882 0 100 50 0 0 t 0 0 18.75 23.5294 29.4118 11.7647 41.1765 0 0 5.88235 0 100 0 37.5 0 0

M04488_2.00_rc_shift1 (ZIC1_rc)
; positions_6nt_m1 versus M04488_2.00_rc (ZIC1_rc); m=170/218; ncol2=15; w=-5; offset=-5; strand=R; shift=1; score=0.473214; -kCACAGCAGGGGGym ; cor=; Ncor= a 0 17.6612 14.4874 91.2478 0 76.677 6.10176 0 77.7472 0 0 8.66435 1.74387 0.36925 0 30.1905 c 0 3.13561 85.5126 0 100 15.7522 0 87.3704 0 0.0138069 0 0 0.0340599 0 30.8746 44.3101 g 0 43.4177 0 0 0 7.25733 93.8982 0 22.2528 92.993 100 71.2053 87.9292 95.3615 9.88849 21.7591 t 0 35.7855 0 8.75224 0 0.313429 0 12.6296 0 6.9932 0 20.1304 10.2929 4.26924 59.2369 3.74023

M07868_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07868_2.00_rc (CTCF_rc); m=171/218; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score=0.473043; --rCCAsyAGrkGGCr ; cor=; Ncor= a 0 0 25.2 7.6 0.4 76.8 5 14.6 90.2 0.2 46.2 2.8 1.6 15.2 12.6 43.2 c 0 0 5.8 85.4 99.4 2.4 63.8 44.2 1.4 0.6 1.2 2.8 0 4.4 74.8 0.8 g 0 0 55.2 1.8 0 13.6 29.8 5.2 4.6 98.6 51.4 59.8 98.2 74.2 1.8 52.8 t 0 0 13.8 5.2 0.2 7.2 1.4 36 3.8 0.6 1.2 34.6 0.2 6.2 10.8 3.2

M07876_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07876_2.00_rc (CTCF_rc); m=172/218; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score=0.471943; --gCCAsyAGrkGGCr ; cor=; Ncor= a 0 0 21.4429 5.6112 0.8016 70.1403 1.8036 9.01801 89.98 0 38.0762 3.2064 1.002 13.4269 8.41681 31.4629 c 0 0 7.81561 89.1784 99.1984 1.8036 65.9319 56.9139 2.004 0.2004 0.6012 5.81161 0.4008 5.4108 81.3628 1.6032 g 0 0 59.3187 2.4048 0 22.0441 32.0641 5.61121 6.6132 99.3988 61.1222 62.3247 97.996 76.9539 3.006 64.9299 t 0 0 11.4228 2.8056 0 6.012 0.2004 28.4569 1.4028 0.4008 0.2004 28.6573 0.6012 4.2084 7.21441 2.004

M07904_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07904_2.00_rc (CTCF_rc); m=173/218; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score=0.471457; --gCCAsyAGrkGGCr ; cor=; Ncor= a 0 0 20.2899 6.2112 0 73.9131 3.1056 11.5942 92.1325 0 44.3064 2.8986 0.4141 12.6294 9.10971 34.7826 c 0 0 5.79709 85.7143 100 1.6563 64.3892 52.795 1.2422 0 0.4141 2.6915 0.4141 4.5549 81.1595 1.0352 g 0 0 60.4554 3.7267 0 17.5983 32.0911 6.6253 4.5549 100 54.6584 63.354 98.9648 79.5031 1.2422 61.9048 t 0 0 13.4576 4.3478 0 6.83231 0.4141 28.9855 2.0704 0 0.6211 31.0559 0.207 3.3126 8.48861 2.2774

M07875_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07875_2.00_rc (CTCF_rc); m=174/218; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score=0.468182; --gCCrscAGrkGGCR ; cor=; Ncor= a 0 0 19.5565 6.04839 0.2016 60.2822 2.0161 8.4677 87.0968 0.4032 33.871 3.0242 0.604801 10.6855 7.25809 25.8065 c 0 0 8.0645 88.3064 99.7984 1.2097 62.9033 61.6935 2.8226 0.2016 0.6048 7.6613 0.2016 5.84679 85.4838 1.8145 g 0 0 61.4919 2.8226 0 31.4516 34.6774 7.0565 8.0645 99.3952 65.3226 64.1129 98.7904 77.4193 1.6129 70.1613 t 0 0 10.8871 2.8226 0 7.05649 0.4032 22.7823 2.0161 0 0.2016 25.2016 0.4032 6.04839 5.64519 2.2177

M07879_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07879_2.00_rc (CTCF_rc); m=175/218; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score=0.467845; --gCCrsyAGrgGGCG ; cor=; Ncor= a 0 0 19.8397 5.4108 0.8016 61.7235 2.8056 7.21441 89.3788 0.4008 32.8657 4.008 0.8016 10.4208 7.41481 23.4469 c 0 0 7.41481 88.3768 98.5972 2.004 62.5251 61.5231 2.2044 0.4008 1.002 6.6132 0.2004 3.4068 85.972 1.2024 g 0 0 61.1223 3.4068 0.2004 27.8557 33.6673 6.01201 7.014 98.5972 65.3307 65.5311 98.5972 81.7636 1.8036 73.3467 t 0 0 11.6232 2.8056 0.4008 8.41681 1.002 25.2505 1.4028 0.6012 0.8016 23.8477 0.4008 4.4088 4.8096 2.004

M00230_2.00_rc_shift8 (EGR2_rc)
; positions_6nt_m1 versus M00230_2.00_rc (EGR2_rc); m=176/218; ncol2=10; w=0; offset=2; strand=R; shift=8; score=0.467405; --------rggkGGGy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 29.2466 14.3531 17.4805 9.50311 20.7623 0.317024 7.12457 17.9665 c 0 0 0 0 0 0 0 0 10.1326 5.77749 6.49536 9.03963 2.41848 3.22593 0.00921935 43.7507 g 0 0 0 0 0 0 0 0 47.7397 63.6863 67.4299 41.7466 69.626 95.7003 86.795 7.45219 t 0 0 0 0 0 0 0 0 12.8811 16.1831 8.59421 39.7106 7.19322 0.756708 6.07116 30.8306

M07888_2.00_rc_shift1 (CTCF_rc)
; positions_6nt_m1 versus M07888_2.00_rc (CTCF_rc); m=177/218; ncol2=15; w=-5; offset=-5; strand=R; shift=1; score=0.466782; -ggCCAsyAGrkGGCr ; cor=; Ncor= a 0 16.5992 22.6721 7.4899 0 74.8988 4.251 11.9433 91.2956 0 48.583 2.834 1.2146 14.17 10.3239 36.6397 c 0 20.8502 5.46559 83.6032 100 2.834 62.9555 48.583 1.0121 0 1.0121 2.834 0 4.251 77.5304 1.417 g 0 42.5101 58.7044 3.4413 0 14.17 31.3765 6.4777 5.46561 100 49.3927 62.7531 98.7854 77.328 2.2267 60.5263 t 0 20.0405 13.1579 5.4656 0 8.0972 1.417 32.996 2.2267 0 1.0121 31.5789 0 4.251 9.919 1.417

M07867_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07867_2.00_rc (CTCF_rc); m=178/218; ncol2=13; w=-4; offset=-4; strand=R; shift=2; score=0.465156; --rCCAsyAGrkGGC- ; cor=; Ncor= a 0 0 32.3887 9.919 0 85.0203 2.6316 16.1943 91.9028 0.4049 54.8583 1.6194 1.8219 13.7652 13.3603 0 c 0 0 4.8583 81.7814 100 0.607301 64.7773 37.0445 1.2146 0 0.8097 0.809701 0 3.0364 70.6478 0 g 0 0 47.3684 2.6316 0 7.08501 30.9717 3.8462 3.6437 99.3927 43.5223 53.6438 97.7732 75.3037 2.0243 0 t 0 0 15.3846 5.668 0 7.28741 1.6194 42.915 3.2389 0.2024 0.8097 43.9271 0.4049 7.89471 13.9676 0

M06139_2.00_rc_shift4 (M06139_2.00_rc)
; positions_6nt_m1 versus M06139_2.00_rc; m=179/218; ncol2=9; w=-2; offset=-2; strand=R; shift=4; score=0.463008; ----CaACAGGTG--- ; cor=; Ncor= a 0 0 0 0 0 63.6364 95.4545 0 100 9.09091 0 0 4.54545 0 0 0 c 0 0 0 0 86.3636 22.7273 0 100 0 0 0 0 9.09091 0 0 0 g 0 0 0 0 4.54545 0 0 0 0 90.9091 100 0 72.7273 0 0 0 t 0 0 0 0 9.09091 13.6364 4.54545 0 0 0 0 100 13.6364 0 0 0

M07901_2.00_rc_shift3 (CTCF_rc)
; positions_6nt_m1 versus M07901_2.00_rc (CTCF_rc); m=180/218; ncol2=11; w=-3; offset=-3; strand=R; shift=3; score=0.461811; ---CCAsyAGrkGG-- ; cor=; Ncor= a 0 0 0 11.0664 0 83.501 3.4205 12.6761 94.165 0.2012 50.7042 2.2133 1.4085 17.505 0 0 c 0 0 0 80.0805 100 1.006 65.996 42.2535 0.8048 0 1.6097 3.4205 0 4.0241 0 0 g 0 0 0 3.4205 0 7.6459 29.7787 3.0181 2.4145 99.7988 46.8813 57.9477 97.9879 72.4347 0 0 t 0 0 0 5.4326 0 7.8471 0.8048 42.0523 2.6157 0 0.8048 36.4185 0.6036 6.03621 0 0

M08352_2.00_rc_shift4 (ZNF784_rc)
; positions_6nt_m1 versus M08352_2.00_rc (ZNF784_rc); m=181/218; ncol2=9; w=-2; offset=-2; strand=R; shift=4; score=0.459806; ----mGGwAGGTg--- ; cor=; Ncor= a 0 0 0 0 53.9773 0.189394 13.0682 28.2197 78.2197 20.6439 0.189394 0.189394 19.1288 0 0 0 c 0 0 0 0 45.6439 0.189394 0.189394 1.70455 8.52273 8.52273 0.189394 0.189394 19.8864 0 0 0 g 0 0 0 0 0.189394 99.4318 86.553 3.97727 8.52273 69.8864 99.4318 0.189394 37.3106 0 0 0 t 0 0 0 0 0.189394 0.189394 0.189394 66.0985 4.73485 0.94697 0.189394 99.4318 23.6742 0 0 0

M00222_2.00_rc_shift3 (SNAI2_rc)
; positions_6nt_m1 versus M00222_2.00_rc (SNAI2_rc); m=182/218; ncol2=10; w=-3; offset=-3; strand=R; shift=3; score=0.457452; ---wwrrCAgGTg--- ; cor=; Ncor= a 0 0 0 26.887 25.8781 30.8883 40.2463 15.3374 88.9009 21.3174 13.9489 11.4922 20.4318 0 0 0 c 0 0 0 22.9116 23.4155 18.7347 5.61263 68.0536 0.000873959 4.26108 0.0171699 0.12144 5.34997 0 0 0 g 0 0 0 23.8467 22.9518 26.3212 33.9544 1.27162 0.211723 63.4037 72.6319 0.00443454 52.305 0 0 0 t 0 0 0 26.3546 27.7545 24.0558 20.1866 15.3374 10.8865 11.0179 13.402 88.3819 21.9133 0 0 0

M00622_2.00_rc_shift9 (M00622_2.00_rc)
; positions_6nt_m1 versus M00622_2.00_rc; m=183/218; ncol2=8; w=0; offset=3; strand=R; shift=9; score=0.457178; ---------cGkGGGc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 8.36106 0.0302663 0.0302663 3.0569 0.0302663 0.0302663 6.69108 c 0 0 0 0 0 0 0 0 0 66.5973 0.0302663 9.11017 0.0302663 0.0302663 0.0302663 56.6245 g 0 0 0 0 0 0 0 0 0 8.36106 99.9092 33.3232 96.8826 99.9092 99.9092 23.3356 t 0 0 0 0 0 0 0 0 0 16.6805 0.0302663 57.5363 0.0302663 0.0302663 0.0302663 13.3489

M07863_2.00_rc_shift3 (CTCF_rc)
; positions_6nt_m1 versus M07863_2.00_rc (CTCF_rc); m=184/218; ncol2=16; w=-3; offset=-3; strand=R; shift=3; score=0.45295; ---CCAscAGrkGGCr ; cor=; Ncor= a 0 0 0 6.6937 0.4057 69.574 2.6369 10.3448 89.0466 0 38.7424 2.8398 1.0142 6.4909 6.6937 35.497 c 0 0 0 85.1927 99.1887 1.6227 61.2576 59.6349 3.0426 0.2028 0.4057 3.0426 0 3.854 87.4239 1.0142 g 0 0 0 4.4625 0.2028 21.7039 35.497 7.9108 6.08519 99.7972 60.8519 59.8377 98.9858 83.3671 1.0142 62.8803 t 0 0 0 3.6511 0.2028 7.0994 0.6085 22.1095 1.8256 0 0 34.2799 0 6.288 4.8682 0.6085

M07865_2.00_rc_shift4 (CTCF_rc)
; positions_6nt_m1 versus M07865_2.00_rc (CTCF_rc); m=185/218; ncol2=16; w=-2; offset=-2; strand=R; shift=4; score=0.452253; ----CAsyAGrkGGCr ; cor=; Ncor= a 0 0 0 0 0.2028 72.4138 3.4483 11.1562 91.075 0.2028 41.1765 3.0426 0.4057 9.33061 8.1136 39.9594 c 0 0 0 0 99.1887 3.0426 60.649 52.3327 1.4199 0.2028 0.4057 2.6369 0 3.6511 84.5842 0.4057 g 0 0 0 0 0 16.8357 33.4686 6.6937 4.0568 99.5944 57.4036 59.8377 99.5943 81.7445 1.217 58.215 t 0 0 0 0 0.608501 7.7079 2.4341 29.8174 3.4483 0 1.0142 34.4828 0 5.27381 6.0852 1.4199

M07805_2.00_shift3 (TCF12)
; positions_6nt_m1 versus M07805_2.00 (TCF12); m=186/218; ncol2=11; w=-3; offset=-3; strand=D; shift=3; score=0.449774; ---rsagCAGsTGk-- ; cor=; Ncor= a 0 0 0 32 18.2222 48.4444 15.5556 0 100 0 6.22221 0 0 3.7778 0 0 c 0 0 0 19.1111 45.1111 11.7778 20.6667 100 0 3.5556 59.3334 0 0 24.8889 0 0 g 0 0 0 35.1111 31.3333 18 63.7777 0 0 96.4444 34.4444 0 100 32 0 0 t 0 0 0 13.7778 5.33331 21.7778 0 0 0 0 0 100 0 39.3333 0 0

M07607_2.00_rc_shift9 (ZNF333_rc)
; positions_6nt_m1 versus M07607_2.00_rc (ZNF333_rc); m=187/218; ncol2=9; w=0; offset=3; strand=R; shift=9; score= 0.445; ---------ySTGGAk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 13.898 0.0822368 0.0822368 0.0822368 0.0822368 99.7533 0.0822368 c 0 0 0 0 0 0 0 0 0 31.0033 27.7138 0.0822368 0.0822368 0.0822368 0.0822368 9.95066 g 0 0 0 0 0 0 0 0 0 24.4243 72.1217 0.0822368 99.7533 99.7533 0.0822368 62.5822 t 0 0 0 0 0 0 0 0 0 30.6743 0.0822368 99.7533 0.0822368 0.0822368 0.0822368 27.3849

M09795_2.00_rc_shift2 (TCF3_rc)
; positions_6nt_m1 versus M09795_2.00_rc (TCF3_rc); m=188/218; ncol2=16; w=-4; offset=-4; strand=R; shift=2; score=0.441486; --awkmrCAGGTGtTm ; cor=; Ncor= a 0 0 41.4141 31 17 50 50 0 100 0 0 0 0 0 20 34 c 0 0 24.2424 24 17 26 14 100 0 5 16 0 0 24 3 46 g 0 0 17.1717 14 30 7 33 0 0 92 84 0 100 13 8 11 t 0 0 17.1717 31 36 17 3 0 0 3 0 100 0 63 69 9

M04662_2.00_shift9 (YBX1,YBX2,YBX3)
; positions_6nt_m1 versus M04662_2.00 (YBX1,YBX2,YBX3); m=189/218; ncol2=9; w=0; offset=3; strand=D; shift=9; score=0.441271; ---------GrTGGwa ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 63.9852 8.83351 20.5665 6.36907 32.8626 65.5209 c 0 0 0 0 0 0 0 0 0 0 0 1.20926 0.181889 0.473453 4.93004 3.29753 g 0 0 0 0 0 0 0 0 0 99.7547 33.9595 0 79.2517 68.7634 15.287 24.6939 t 0 0 0 0 0 0 0 0 0 0.245298 2.05523 89.9572 0 24.3941 46.9204 6.48765

M04661_2.00_shift9 (YBX1,YBX2,YBX3)
; positions_6nt_m1 versus M04661_2.00 (YBX1,YBX2,YBX3); m=190/218; ncol2=9; w=0; offset=3; strand=D; shift=9; score=0.439593; ---------GrTGGwA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 66.5043 4.47118 14.3859 4.42049 33.2221 74.4582 c 0 0 0 0 0 0 0 0 0 0 0 0.0179565 0 0 1.86686 1.36054 g 0 0 0 0 0 0 0 0 0 100 32.9804 0.188544 85.6141 76.8123 13.7909 20.4082 t 0 0 0 0 0 0 0 0 0 0 0.515319 95.3223 0 18.7672 51.1201 3.77306

M07695_2.00_shift10 (ZNF33A)
; positions_6nt_m1 versus M07695_2.00 (ZNF33A); m=191/218; ncol2=6; w=0; offset=4; strand=D; shift=10; score=0.435394; ----------GTGsYT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0744801 0.0744801 0.0744801 11.6934 0.0744801 0.0744801 c 0 0 0 0 0 0 0 0 0 0 0.0744801 0.0744801 0.0744801 28.724 70.5804 10.1025 g 0 0 0 0 0 0 0 0 0 0 99.7766 0.0744801 99.7766 37.9595 0.0744801 0.0744801 t 0 0 0 0 0 0 0 0 0 0 0.0744801 99.7766 0.0744801 21.6231 29.2707 89.7485

M07871_2.00_rc_shift0 (CTCF_rc)
; positions_6nt_m1 versus M07871_2.00_rc (CTCF_rc); m=192/218; ncol2=15; w=-6; offset=-6; strand=R; shift=0; score=0.433212; yggCCAscAGrkGGC- ; cor=; Ncor= a 7.2 12.4 19.4 7.6 1.4 73 1.8 12.6 85.6 1.4 33 3.4 1 3.8 5.4 0 c 39.8 18 8 82.8 98 0.6 59.6 57.2 4.8 1.2 0.4 4.4 0 2 89.2 0 g 14 54.8 60 5.2 0.4 20.8 37.4 10.8 7.4 96.8 66.4 49.6 98.4 86.4 0.6 0 t 39 14.8 12.6 4.4 0.2 5.6 1.2 19.4 2.2 0.6 0.2 42.6 0.6 7.8 4.8 0

M07916_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07916_2.00_rc (CTCF_rc); m=193/218; ncol2=17; w=-4; offset=-4; strand=R; shift=2; score=0.433096; --rCCAsyAGrkGGCr ; cor=; Ncor= a 0 0 31.0838 8.38449 0 84.867 3.8855 14.7239 90.184 0.6135 52.1472 3.272 1.227 9.20249 7.1575 52.5562 c 0 0 6.3395 83.231 100 1.227 60.7362 40.0818 1.4315 0 0.409 1.4315 0 3.272 80.9816 1.0225 g 0 0 48.0573 4.499 0 8.38449 32.9243 7.1575 4.908 98.5685 47.0348 46.0123 98.5685 81.7995 0.818 45.6033 t 0 0 14.5194 3.8855 0 5.52149 2.454 38.0368 3.4765 0.818 0.409 49.2843 0.2045 5.72599 11.0429 0.818

M08774_2.00_shift3 (M08774_2.00)
; positions_6nt_m1 versus M08774_2.00; m=194/218; ncol2=11; w=-3; offset=-3; strand=D; shift=3; score=0.432929; ---ssArCAGCTGg-- ; cor=; Ncor= a 0 0 0 17.2 15.2 68.8 28 5.6 98.4 0.6 5.4 2.6 0.4 0.2 0 0 c 0 0 0 28.6 45 6.8 10.8 92.2 0.4 0.4 87.8 1.2 0.4 14.8 0 0 g 0 0 0 47.2 29.6 20 61 1.6 1 96.4 6.4 0.4 98.2 63.4 0 0 t 0 0 0 7 10.2 4.4 0.2 0.6 0.2 2.6 0.4 95.8 1 21.6 0 0

M08739_2.00_shift3 (BHLHA15)
; positions_6nt_m1 versus M08739_2.00 (BHLHA15); m=195/218; ncol2=11; w=-3; offset=-3; strand=D; shift=3; score=0.432929; ---ssArCAGCTGg-- ; cor=; Ncor= a 0 0 0 17.2 15.2 68.8 28 5.6 98.4 0.6 5.4 2.6 0.4 0.2 0 0 c 0 0 0 28.6 45 6.8 10.8 92.2 0.4 0.4 87.8 1.2 0.4 14.8 0 0 g 0 0 0 47.2 29.6 20 61 1.6 1 96.4 6.4 0.4 98.2 63.4 0 0 t 0 0 0 7 10.2 4.4 0.2 0.6 0.2 2.6 0.4 95.8 1 21.6 0 0

M07792_2.00_shift3 (MAX)
; positions_6nt_m1 versus M07792_2.00 (MAX); m=196/218; ncol2=11; w=-3; offset=-3; strand=D; shift=3; score=0.431813; ---vrrsCACGTGg-- ; cor=; Ncor= a 0 0 0 30.0971 34.9515 51.2135 16.9903 0 100 0 17.4757 7.2816 0 9.2233 0 0 c 0 0 0 25.7282 17.4757 3.3981 26.699 100 0 93.932 0 3.1553 0 20.8738 0 0 g 0 0 0 29.6117 37.1359 40.534 44.4175 0 0 4.8544 82.5243 0 100 58.4951 0 0 t 0 0 0 14.5631 10.4369 4.8544 11.8932 0 0 1.2136 0 89.5631 0 11.4078 0 0

M08741_2.00_rc_shift8 (SREBF2_rc)
; positions_6nt_m1 versus M08741_2.00_rc (SREBF2_rc); m=197/218; ncol2=13; w=0; offset=2; strand=R; shift=8; score=0.430423; --------rsgTGGgg ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.0336 17.3237 21.1019 14.9617 2.14535 5.19452 17.5635 11.1018 c 0 0 0 0 0 0 0 0 24.6757 30.1954 16.5129 4.85442 3.31929 0.570711 22.0591 22.9676 g 0 0 0 0 0 0 0 0 37.5036 41.202 56.8716 6.12859 90.8992 94.0018 49.0636 64.6751 t 0 0 0 0 0 0 0 0 11.7872 11.2789 5.51362 74.0552 3.63616 0.232943 11.3138 1.25553

M08752_2.00_rc_shift8 (M08752_2.00_rc)
; positions_6nt_m1 versus M08752_2.00_rc; m=198/218; ncol2=13; w=0; offset=2; strand=R; shift=8; score=0.430423; --------rsgTGGgg ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.0336 17.3237 21.1019 14.9617 2.14535 5.19452 17.5635 11.1018 c 0 0 0 0 0 0 0 0 24.6757 30.1954 16.5129 4.85442 3.31929 0.570711 22.0591 22.9676 g 0 0 0 0 0 0 0 0 37.5036 41.202 56.8716 6.12859 90.8992 94.0018 49.0636 64.6751 t 0 0 0 0 0 0 0 0 11.7872 11.2789 5.51362 74.0552 3.63616 0.232943 11.3138 1.25553

M05832_2.00_rc_shift7 (MAX_rc)
; positions_6nt_m1 versus M05832_2.00_rc (MAX_rc); m=199/218; ncol2=6; w=0; offset=1; strand=R; shift=7; score=0.428043; -------CACGTG--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.7 92.6 0 2.7 0.1 0 0 0 0 c 0 0 0 0 0 0 0 99.2 0 83.5 0 3.2 0 0 0 0 g 0 0 0 0 0 0 0 0 7.1 0.1 97.2 0 99.8 0 0 0 t 0 0 0 0 0 0 0 0 0.2 16.4 0 96.6 0.1 0 0 0

M03673_2.00_shift1 (M03673_2.00)
; positions_6nt_m1 versus M03673_2.00; m=200/218; ncol2=13; w=-5; offset=-5; strand=D; shift=1; score=0.425792; -rhGCAACAGGTGg-- ; cor=; Ncor= a 0 36.9153 26.5048 0.705882 0.0502639 98.2116 99.7477 0.35229 99.5719 4.77447 0.201258 0.0252525 5.4025 5.03415 0 0 c 0 7.71176 27.5164 1.13369 99.3717 0.695479 0.151362 99.4967 0.125913 0.263916 0.125786 0.126263 0.817908 11.2067 0 0 g 0 49.5575 8.21952 84.5775 0 0.322901 0.100908 0.150981 0 94.8656 99.4717 0 85.1055 62.2312 0 0 t 0 5.81542 37.7592 13.5829 0.578035 0.769995 0 0 0.302191 0.0959693 0.201258 99.8485 8.67413 21.528 0 0

M06086_2.00_shift1 (M06086_2.00)
; positions_6nt_m1 versus M06086_2.00; m=201/218; ncol2=13; w=-5; offset=-5; strand=D; shift=1; score=0.421609; -gykCAACAGGTGg-- ; cor=; Ncor= a 0 24.1645 22.365 7.19794 3.59897 81.7481 98.9717 1.28535 98.9717 8.22622 0.771208 0.771208 6.29921 5.20231 0 0 c 0 10.7969 29.8201 9.76864 84.8329 11.054 0.257069 98.2005 0.514139 0.514139 0 1.28535 5.77428 6.6474 0 0 g 0 40.3599 14.1388 55.527 2.05656 0 0 0 0.514139 90.7455 98.9717 2.05656 74.8031 65.6069 0 0 t 0 24.6787 33.6761 27.5064 9.51157 7.19794 0.771208 0.514139 0 0.514139 0.257069 95.8869 13.1234 22.5434 0 0

M07780_2.00_rc_shift9 (ZNF2_rc)
; positions_6nt_m1 versus M07780_2.00_rc (ZNF2_rc); m=202/218; ncol2=9; w=0; offset=3; strand=R; shift=9; score=0.420458; ---------GgkGGCG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0.125 23.125 3.125 0.125 0.125 0.125 0.125 c 0 0 0 0 0 0 0 0 0 0.125 12.625 18.125 0.125 10.625 82.625 0.125 g 0 0 0 0 0 0 0 0 0 99.625 64.125 47.125 99.625 89.125 0.125 99.625 t 0 0 0 0 0 0 0 0 0 0.125 0.125 31.625 0.125 0.125 17.125 0.125

M08749_2.00_rc_shift9 (M08749_2.00_rc)
; positions_6nt_m1 versus M08749_2.00_rc; m=203/218; ncol2=11; w=0; offset=3; strand=R; shift=9; score=0.418555; ---------ggTgrss ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 19.7436 23.1571 2.13117 6.60289 27.9102 6.7199 3.88067 c 0 0 0 0 0 0 0 0 0 21.2974 21.2726 5.56053 24.8321 0.315565 27.2538 31.4176 g 0 0 0 0 0 0 0 0 0 45.6051 53.8291 2.48934 63.3444 66.3709 57.2815 64.4119 t 0 0 0 0 0 0 0 0 0 13.3539 1.74117 89.819 5.22063 5.40331 8.7448 0.289879

M07900_2.00_rc_shift3 (CTCF_rc)
; positions_6nt_m1 versus M07900_2.00_rc (CTCF_rc); m=204/218; ncol2=17; w=-3; offset=-3; strand=R; shift=3; score=0.416313; ---CCAsyAGrkGGCR ; cor=; Ncor= a 0 0 0 5.6 0.8 70.4 2.8 10 89.8 0 40 4.6 1 13.4 6.8 29 c 0 0 0 85.8 99.2 2.6 62 52.8 1.8 0.4 1.2 5.2 0.2 3.8 85 0.8 g 0 0 0 3.6 0 19.4 34.2 7.2 5.8 98.8 58.2 61 98.8 79 1.2 68 t 0 0 0 5 0 7.6 1 30 2.6 0.8 0.6 29.2 0 3.8 7 2.2

M07883_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07883_2.00_rc (CTCF_rc); m=205/218; ncol2=17; w=-4; offset=-4; strand=R; shift=2; score=0.413596; --gCCAsyAGrkGGCr ; cor=; Ncor= a 0 0 22.9814 6.6253 0 73.292 2.6915 9.10971 91.9254 0 40.3727 3.1056 0.828199 14.0787 6.41821 34.1615 c 0 0 6.0041 86.9565 100 2.2774 66.4596 56.7289 1.4493 0 0.828199 5.17599 0.4141 4.7619 84.2651 0.4141 g 0 0 60.4555 2.4845 0 17.5983 30.4348 6.00411 4.7619 100 57.3498 60.8695 98.7577 75.5693 2.2774 63.147 t 0 0 10.559 3.9337 0 6.83231 0.4141 28.1573 1.8634 0 1.4493 30.8489 0 5.59009 7.03931 2.2774

M06140_2.00_rc_shift1 (M06140_2.00_rc)
; positions_6nt_m1 versus M06140_2.00_rc; m=206/218; ncol2=13; w=-5; offset=-5; strand=R; shift=1; score=0.413166; -rbkCaACAGGTGk-- ; cor=; Ncor= a 0 25.1509 16.2978 12.2736 4.42656 64.9899 97.3843 1.40845 96.3783 7.84708 0 2.8169 8.5595 7.95181 0 0 c 0 16.9014 27.7666 14.0845 77.2636 18.3099 0.201207 98.3903 0.402414 0.201207 0 1.00604 4.5929 12.2892 0 0 g 0 39.6378 25.3521 41.8511 4.22535 1.40845 0.603622 0 0.201207 90.5433 99.1952 0.201207 73.0689 54.6988 0 0 t 0 18.3099 30.5835 31.7907 14.0845 15.2918 1.81087 0.201207 3.01811 1.40845 0.804829 95.9759 13.7787 25.0602 0 0

M02878_2.00_rc_shift1 (CTCF_rc)
; positions_6nt_m1 versus M02878_2.00_rc (CTCF_rc); m=207/218; ncol2=17; w=-5; offset=-5; strand=R; shift=1; score=0.412412; -krCCrCTAGrkGGCG ; cor=; Ncor= a 0 11.262 55.7898 21.766 1.4078 59.8255 6.21239 9.79329 99.2356 0 35.1346 2.10077 0 0.44721 0.680918 5.9016 c 0 21.2438 0.816909 73.138 98.5689 0 79.9154 11.7447 0.16129 0.0112701 0 1.80439 0 0.0777756 98.8124 0 g 0 31.0527 28.1977 1.11721 0 38.7978 13.1403 2.09598 0.343619 99.9887 64.0792 45.3365 99.5469 93.2432 0 94.0984 t 0 36.4415 15.1957 3.97883 0.0232693 1.37677 0.731826 76.366 0.259467 0 0.786192 50.7584 0.453068 6.23177 0.50673 0

M08885_2.00_rc_shift2 (CTCFL_rc)
; positions_6nt_m1 versus M08885_2.00_rc (CTCFL_rc); m=208/218; ncol2=17; w=-4; offset=-4; strand=R; shift=2; score=0.412317; --gCCrsyAGGGGGCG ; cor=; Ncor= a 0 0 16.6667 4.44444 1.77778 34 12.4444 14.2222 87.3333 0.888889 23.1111 8 0.888889 1.11111 8.22222 21.1111 c 0 0 18.2222 83.3333 94.2222 6.88889 44.6667 51.1111 4.44444 1.11111 0 9.11111 0.222222 1.33333 89.7778 0.444444 g 0 0 44.2222 7.33333 2.66667 37.3333 41.7778 9.11111 3.11111 97.7778 75.5556 73.3333 98.2222 93.5556 0.444444 76.8889 t 0 0 20.8889 4.88889 1.33333 21.7778 1.11111 25.5556 5.11111 0.222222 1.33333 9.55556 0.666667 4 1.55556 1.55556

M07911_2.00_rc_shift0 (CTCF_rc)
; positions_6nt_m1 versus M07911_2.00_rc (CTCF_rc); m=209/218; ncol2=18; w=-6; offset=-6; strand=R; shift=0; score=0.41143; yggCCascAGrkGGCr ; cor=; Ncor= a 10.3529 16.7059 22.8235 6.3529 0 66.3529 2.8235 12.4706 88.706 0 32.9412 3.7647 0 5.1765 8.9412 33.1765 c 37.6471 20 7.29411 83.7647 100 3.0588 62.3529 55.0588 2.1176 0 0.2353 3.5294 0.4706 3.2941 82.8235 1.1765 g 11.7647 45.4118 58.8236 5.4118 0 20.7059 33.1765 8.4706 6.35291 100 66.3529 61.1765 99.5294 87.0588 2.8235 64.2352 t 40.2353 17.8824 11.0588 4.4706 0 9.8824 1.6471 24 2.8235 0 0.4706 31.5294 0 4.4706 5.4118 1.4118

M07880_2.00_rc_shift0 (CTCF_rc)
; positions_6nt_m1 versus M07880_2.00_rc (CTCF_rc); m=210/218; ncol2=15; w=-6; offset=-6; strand=R; shift=0; score=0.409758; yggCCAsyAGrkGGC- ; cor=; Ncor= a 8.52391 17.8794 23.4927 8.1081 0 72.3493 2.9106 10.6029 88.7734 0.2079 41.7879 2.7027 0 11.0187 8.316 0 c 36.3825 17.4636 7.0686 85.2391 100 2.079 63.2017 54.262 2.4948 0 0.4158 4.158 0.2079 4.7817 82.3285 0 g 13.5135 46.1538 57.3805 3.5343 0 17.2557 33.0561 5.4054 6.4449 99.7921 56.9647 58.6279 99.7921 81.289 1.2474 0 t 41.58 18.5031 12.0582 3.1185 0 8.316 0.8316 29.7297 2.2869 0 0.8316 34.5114 0 2.9106 8.1081 0

M07895_2.00_rc_shift2 (CTCF_rc)
; positions_6nt_m1 versus M07895_2.00_rc (CTCF_rc); m=211/218; ncol2=18; w=-4; offset=-4; strand=R; shift=2; score=0.409635; --rCCAsyAGrkGGCr ; cor=; Ncor= a 0 0 28.4483 7.5431 0 73.0604 3.2328 13.3621 89.8707 0.6466 41.3793 6.03449 1.5086 6.89659 13.5776 38.5776 c 0 0 6.89659 84.0517 100 2.3707 55.8189 43.75 1.5086 0 0.2155 2.5862 0 4.5259 74.7844 2.5862 g 0 0 52.1551 4.5259 0 12.7155 39.0086 6.25 5.819 99.3534 57.1121 59.4827 97.8448 82.7585 2.1552 55.1724 t 0 0 12.5 3.8793 0 11.8534 1.9397 36.6379 2.8017 0 1.2931 31.8966 0.6466 5.81899 9.48279 3.6638

M07644_2.00_rc_shift10 (ZNF77_rc)
; positions_6nt_m1 versus M07644_2.00_rc (ZNF77_rc); m=212/218; ncol2=7; w=0; offset=4; strand=R; shift=10; score=0.408557; ----------GTGrAG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 50 100 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 100 0 100 50 0 100 t 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0

M03691_2.00_shift1 (M03691_2.00)
; positions_6nt_m1 versus M03691_2.00; m=213/218; ncol2=13; w=-5; offset=-5; strand=D; shift=1; score=0.407309; -rhGCAACAGGTGg-- ; cor=; Ncor= a 0 53.0496 26.4508 0.0716846 0.168634 98.0802 99.0873 0.899382 99.2027 3.4981 1.08025 1.45386 8.85658 13.0751 0 0 c 0 7.81449 34.6976 0 99.4379 1.01637 0.741586 99.1006 0.797267 0.684411 0.925926 0.632111 1.58625 20.1574 0 0 g 0 35.197 1.40501 84.086 0 0 0 0 0 94.2966 97.1451 0 72.1084 48.3656 0 0 t 0 3.93901 37.4465 15.8423 0.393479 0.903444 0.171135 0 0 1.52091 0.848765 97.914 17.4488 18.4019 0 0

M02925_2.00_shift1 (SCRT2)
; positions_6nt_m1 versus M02925_2.00 (SCRT2); m=214/218; ncol2=13; w=-5; offset=-5; strand=D; shift=1; score=0.403167; -rwGCAACAGGTGg-- ; cor=; Ncor= a 0 44.5578 33.218 0.446144 0.0703235 98.3536 100 0.92264 99.5697 9.14593 0 0.252101 7.26295 11.451 0 0 c 0 7.82313 18.6851 1.65711 99.9297 1.29983 0 98.7225 0.430293 0.336247 1.002 0.168067 4.03497 23.2941 0 0 g 0 39.881 2.59516 77.5653 0 0.259965 0 0.141945 0 90.5178 98.998 0 72.6967 44 0 0 t 0 7.7381 45.5017 20.3314 0 0.0866551 0 0.212917 0 0 0 99.5798 16.0054 21.2549 0 0

M07906_2.00_rc_shift3 (CTCF_rc)
; positions_6nt_m1 versus M07906_2.00_rc (CTCF_rc); m=215/218; ncol2=18; w=-3; offset=-3; strand=R; shift=3; score=0.403116; ---CCAsyAGrkGGCr ; cor=; Ncor= a 0 0 0 8.02471 0 81.0699 3.0864 16.2551 90.1234 0.823001 50.8231 3.0864 1.2346 9.87651 8.43621 48.5597 c 0 0 0 83.9507 100 1.0288 66.6667 38.8889 3.0864 0 1.0288 1.8519 0 3.4979 79.0124 0 g 0 0 0 3.4979 0 10.2881 27.7778 6.9959 4.9383 98.7655 47.3251 49.3827 98.7654 80.4528 0.823001 50.823 t 0 0 0 4.5267 0 7.61319 2.4691 37.8601 1.8519 0.4115 0.823001 45.679 0 6.17281 11.7284 0.6173

M08025_2.00_rc_shift7 (M08025_2.00_rc)
; positions_6nt_m1 versus M08025_2.00_rc; m=216/218; ncol2=15; w=0; offset=1; strand=R; shift=7; score=0.401777; -------grGgkGGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 20 33.3333 12.381 12.381 10.4762 0 1.9048 4.7619 0.9524 c 0 0 0 0 0 0 0 21.9048 9.5238 12.381 17.1429 2.8571 0 0.9524 0.9524 0 g 0 0 0 0 0 0 0 51.4285 40.9524 68.5713 45.7143 27.619 94.2857 93.3333 93.3333 98.0952 t 0 0 0 0 0 0 0 6.66669 16.1905 6.66669 24.7619 59.0477 5.7143 3.8095 0.9524 0.9524

M07907_2.00_rc_shift1 (CTCF_rc)
; positions_6nt_m1 versus M07907_2.00_rc (CTCF_rc); m=217/218; ncol2=18; w=-5; offset=-5; strand=R; shift=1; score=0.401481; -grCCAsyAGrkGGCr ; cor=; Ncor= a 0 17.3387 29.8387 6.85481 1.0081 78.629 3.2258 16.9355 86.4919 2.0161 48.5887 4.2339 1.6129 8.46771 10.6855 43.5484 c 0 19.5565 6.6532 84.8791 98.3871 1.2097 64.7177 41.7339 3.4274 0.2016 0.4032 1.4113 0 3.629 76.8145 1.2097 g 0 40.121 50 3.8306 0 12.2984 29.4355 6.6532 5.8468 96.9758 49.5968 54.6371 97.5806 81.4517 2.2177 53.4274 t 0 22.9839 13.5081 4.4355 0.6048 7.8629 2.621 34.6774 4.2339 0.8065 1.4113 39.7177 0.8065 6.45161 10.2823 1.8145

M07887_2.00_rc_shift0 (CTCF_rc)
; positions_6nt_m1 versus M07887_2.00_rc (CTCF_rc); m=218/218; ncol2=18; w=-6; offset=-6; strand=R; shift=0; score=0.401198; yggCCAsyAGrkGGCr ; cor=; Ncor= a 6.55739 14.3443 19.0574 5.9426 0.2049 74.7951 3.6885 16.1885 89.5491 0 42.418 3.2787 1.2295 8.8115 11.2705 39.7541 c 36.0656 18.6475 5.7377 83.6066 99.7951 1.4344 63.5246 48.7705 2.0492 0 0.614799 1.8443 0 4.5082 79.3032 1.2295 g 13.1148 46.7213 61.6803 4.5082 0 15.5738 31.7623 5.7377 5.32789 99.5902 56.3524 60.8606 98.1557 80.5328 1.8443 56.9672 t 44.2623 20.2869 13.5246 5.9426 0 8.1967 1.0246 29.3033 3.0738 0.4098 0.614799 34.0164 0.6148 6.1475 7.58199 2.0492

One-to-n matrix alignment; reference matrix: positions_7nt_m2_shift4 ; 25 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
positions_7nt_m2_shift4 (positions_7nt_m2)
; positions_7nt_m2; m=0 (reference); ncol1=12; shift=4; ncol=16; ----waTATATATAtw ; Alignment reference a 0 0 0 0 5022 8469 1770 14881 1412 15210 1453 15086 1281 14491 4068 7749 c 0 0 0 0 3357 2455 1876 777 1881 658 1753 691 2138 933 4078 2943 g 0 0 0 0 2940 4070 934 2131 697 1748 660 1880 779 1876 2453 3355 t 0 0 0 0 7751 4076 14490 1281 15080 1454 15204 1413 14872 1770 8471 5023

M00332_2.00_shift4 (HOXB7,HOXC5,HOXC6)
; positions_7nt_m2 versus M00332_2.00 (HOXB7,HOXC5,HOXC6); m=1/24; ncol2=10; w=0; offset=0; strand=D; shift=4; score=0.755701; ----atWATATAya-- ; cor=; Ncor= a 0 0 0 0 32.1579 19.9591 29.1262 99.917 9.90596 79.5937 10.4727 80.8041 11.9766 45.7153 0 0 c 0 0 0 0 22.614 10.1889 0.0276595 0.0276595 0.0276595 0.0276595 0.0276595 0.0276595 32.0521 14.8387 0 0 g 0 0 0 0 22.614 20.0672 0.0276595 0.0276595 0.0276595 0.0276595 0.0276595 9.57764 2.41363 14.8387 0 0 t 0 0 0 0 22.614 49.7848 70.8184 0.0276595 90.0387 20.351 89.472 9.59064 53.5576 24.6072 0 0

M00255_2.00_shift4 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1)
; positions_7nt_m2 versus M00255_2.00 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1); m=2/24; ncol2=12; w=0; offset=0; strand=D; shift=4; score=0.743584; ----wrTATATwatrc ; cor=; Ncor= a 0 0 0 0 31.2198 43.2921 5.14749 82.9897 0.0360027 80.6356 9.64692 48.0179 55.4481 22.2678 29.6103 22.5695 c 0 0 0 0 19.7177 12.49 5.14749 2.46645 9.79381 0.0360027 9.47987 0.0360027 14.9292 12.546 19.8885 32.2914 g 0 0 0 0 19.7177 31.728 5.14749 2.46645 9.66312 9.57816 0.0360027 0.0360027 5.31832 12.546 30.6126 22.5695 t 0 0 0 0 29.3448 12.49 84.5575 12.0774 80.5071 9.75025 80.8372 51.9101 24.3043 52.6401 19.8885 22.5695

M00786_2.00_rc_shift5 (M00786_2.00_rc)
; positions_7nt_m2 versus M00786_2.00_rc; m=3/24; ncol2=9; w=0; offset=1; strand=R; shift=5; score=0.72694; -----ayatayata-- ; cor=; Ncor= a 0 0 0 0 0 50 12.5 62.5 12.5 62.5 12.5 62.5 12.5 50 0 0 c 0 0 0 0 0 16.6667 25 12.5 12.5 12.5 25 12.5 12.5 16.6667 0 0 g 0 0 0 0 0 16.6667 12.5 12.5 12.5 12.5 12.5 12.5 12.5 16.6667 0 0 t 0 0 0 0 0 16.6667 50 12.5 62.5 12.5 50 12.5 62.5 16.6667 0 0

M00333_2.00_rc_shift5 (HOXB7,HOXC5,HOXC6_rc)
; positions_7nt_m2 versus M00333_2.00_rc (HOXB7,HOXC5,HOXC6_rc); m=4/24; ncol2=10; w=0; offset=1; strand=R; shift=5; score=0.689427; -----wAATATATat- ; cor=; Ncor= a 0 0 0 0 0 37.9552 82.165 80.3235 9.83457 79.4955 20.1694 99.915 0.0283262 57.2618 22.5353 0 c 0 0 0 0 0 17.3895 2.49306 0.0283262 0.0283262 0.0283262 9.88726 0.0283262 0.0283262 7.6388 22.5353 0 g 0 0 0 0 0 17.3895 2.49306 0.0283262 0.0283262 10.0921 0.0283262 0.0283262 0.0283262 17.4351 22.5353 0 t 0 0 0 0 0 27.2657 12.8488 19.6199 90.1088 10.3841 69.915 0.0283262 99.915 17.6643 32.3942 0

M00308_2.00_shift6 (HESX1,NKX1-1,NKX1-2,OTP,SEBOX)
; positions_7nt_m2 versus M00308_2.00 (HESX1,NKX1-1,NKX1-2,OTP,SEBOX); m=5/24; ncol2=9; w=0; offset=2; strand=D; shift=6; score=0.682615; ------yATAtATar- ; cor=; Ncor= a 0 0 0 0 0 0 14.4198 90.4175 9.52605 99.9154 19.4162 99.9154 9.52605 61.2864 29.1397 0 c 0 0 0 0 0 0 34.7792 0.0281994 18.3564 0.0281994 19.8662 0.0281994 9.46571 9.19273 20.6297 0 g 0 0 0 0 0 0 14.4198 9.52605 0.0281994 0.0281994 0.0281994 0.0281994 0.0281994 20.1259 29.2821 0 t 0 0 0 0 0 0 36.3812 0.0281994 72.0893 0.0281994 60.6894 0.0281994 80.98 9.39492 20.9486 0

M00304_2.00_shift4 (HOXC5,NANOGP8,NKX1-1,NKX1-2,VENTX)
; positions_7nt_m2 versus M00304_2.00 (HOXC5,NANOGP8,NKX1-1,NKX1-2,VENTX); m=6/24; ncol2=9; w=0; offset=0; strand=D; shift=4; score=0.676802; ----aATAYATAy--- ; cor=; Ncor= a 0 0 0 0 40.0565 89.4224 0.0269769 99.9191 0.0269769 80.0595 0.0269769 89.9711 5.04582 0 0 0 c 0 0 0 0 19.9812 0.0269769 19.5574 0.0269769 30.9856 0.0269769 0.0269769 0.0269769 33.7592 0 0 0 g 0 0 0 0 19.9812 10.5237 0.0269769 0.0269769 0.0269769 19.8865 0.0269769 9.97497 14.9938 0 0 0 t 0 0 0 0 19.9812 0.0269769 80.3886 0.0269769 68.9604 0.0269769 99.9191 0.0269769 46.2012 0 0 0

M01693_2.00_rc_shift5 (M01693_2.00_rc)
; positions_7nt_m2 versus M01693_2.00_rc; m=7/24; ncol2=10; w=0; offset=1; strand=R; shift=5; score= 0.6278; -----rtAWWTATwt- ; cor=; Ncor= a 0 0 0 0 0 30.2779 23.9593 90.6185 73.2217 70.8945 10.9675 76.7638 10.28 26.0727 10.0113 0 c 0 0 0 0 0 20.3034 15.0083 0.0196195 0.0196195 0.0196195 0.0196195 0.0196195 8.83145 4.7162 19.3339 0 g 0 0 0 0 0 29.1152 15.0083 9.34227 0.0196195 0.0196195 0.0196195 0.0196195 0.0196195 13.3577 10.0113 0 t 0 0 0 0 0 20.3034 46.0241 0.0196195 26.7391 29.0663 88.9933 23.1969 80.869 55.8535 60.6435 0

M01672_2.00_shift6 (M01672_2.00)
; positions_7nt_m2 versus M01672_2.00; m=8/24; ncol2=10; w=0; offset=2; strand=D; shift=6; score=0.603812; ------tAWWTAWWta ; cor=; Ncor= a 0 0 0 0 0 0 24.811 83.1954 29.2968 70.1933 0.0230425 80.2506 68.6996 29.7562 21.3125 32.2088 c 0 0 0 0 0 0 15.2843 2.42597 0.0230425 0.0230425 0.0230425 0.0230425 0.0230425 0.0230425 9.73873 22.5971 g 0 0 0 0 0 0 24.824 2.42597 0.0230425 0.0230425 0.0230425 0.0230425 0.0230425 0.0230425 9.73873 22.5971 t 0 0 0 0 0 0 35.0807 11.9527 70.6571 29.7606 99.9309 19.7033 31.2544 70.1978 59.21 22.5971

M00371_2.00_shift2 (NR2E3)
; positions_7nt_m2 versus M00371_2.00 (NR2E3); m=9/24; ncol2=13; w=-2; offset=-2; strand=D; shift=2; score=0.594005; --actyAATaTATwc- ; cor=; Ncor= a 0 0 31.9047 22.6984 20.1188 17.9334 71.3816 69.6422 0.0160035 60.2687 22.3089 70.4617 4.89718 39.5138 21.6113 0 c 0 0 22.6984 31.9047 20.1188 27.6124 12.7782 9.22231 0.0160035 9.22231 2.31758 2.31758 18.4519 16.9283 35.1661 0 g 0 0 22.6984 22.6984 20.1188 8.08775 3.4047 10.8011 0.0160035 10.3344 2.31758 24.9031 4.89718 16.9283 21.6113 0 t 0 0 22.6984 22.6984 39.6435 46.3664 12.4354 10.3344 99.952 20.1746 73.0559 2.31758 71.7537 26.6297 21.6113 0

M08214_2.00_shift5 (BORCS8-MEF2B)
; positions_7nt_m2 versus M08214_2.00 (BORCS8-MEF2B); m=10/24; ncol2=10; w=0; offset=1; strand=D; shift=5; score=0.589152; -----yTAwwwwTAr- ; cor=; Ncor= a 0 0 0 0 0 0 0 100 50 50 50 50 0 100 50 0 c 0 0 0 0 0 50 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50 0 t 0 0 0 0 0 50 100 0 50 50 50 50 100 0 0 0

M08609_2.00_shift0 (TBPL2)
; positions_7nt_m2 versus M08609_2.00 (TBPL2); m=11/24; ncol2=21; w=-4; offset=-4; strand=D; shift=0; score=0.520851; mwyswaTATATATwyC ; cor=; Ncor= a 28.6371 30.1021 12.1658 11.2231 48.3248 65.7135 8.11767 94.7483 2.07983 95.4667 1.20064 95.5608 5.90851 52.9666 24.7765 8.44102 c 27.0884 17.2576 38.3999 36.9687 12.9197 9.43762 2.49132 0.331348 0.601918 0.517672 0.438967 2.38488 2.59269 2.73321 26.6325 70.1617 g 19.3837 17.6397 22.8247 38.0802 12.2748 6.21646 1.00752 0.4462 0.225342 0.186526 0.241747 0.785493 0.791603 11.0816 19.8825 9.86462 t 24.8908 35.0006 26.6096 13.728 26.4806 18.6324 88.3835 4.47411 97.0929 3.82915 98.1186 1.26885 90.7072 33.2186 28.7085 11.5326

M00244_2.00_shift2 (WT1)
; positions_7nt_m2 versus M00244_2.00 (WT1); m=12/24; ncol2=12; w=-2; offset=-2; strand=D; shift=2; score=0.511894; --ttrwAAwATATw-- ; cor=; Ncor= a 0 0 22.5016 22.5016 30.0968 47.5232 89.9424 69.8156 30.2988 79.7833 12.4045 92.3885 5.06892 37.5588 0 0 c 0 0 22.5016 22.5016 19.9698 7.51413 9.98008 20.1718 9.90604 0.0387606 12.4095 2.53717 5.06892 17.5246 0 0 g 0 0 22.5016 22.5016 29.9635 7.51413 0.0387606 0.0387606 0.0387606 0.0387606 2.53717 2.53717 5.06892 17.5246 0 0 t 0 0 32.4952 32.4952 19.9698 37.4485 0.0387606 9.97388 59.7564 20.1392 72.6489 2.53717 84.7933 27.3919 0 0

M04857_2.00_shift3 (FOXR2)
; positions_7nt_m2 versus M04857_2.00 (FOXR2); m=13/24; ncol2=17; w=-1; offset=-1; strand=D; shift=3; score=0.507998; ---ayrTAwACATAAA ; cor=; Ncor= a 0 0 0 61.0519 10.0686 65.5193 1.72414 99.8007 56.0563 89.6181 0.060024 98.6211 0.462963 99.4702 72.0384 99.2074 c 0 0 0 6.65779 36.1556 8.21256 17.2414 0.13289 1.69014 0.0596659 90.1561 0.722259 0.0661376 0.0662252 6.09113 0.264201 g 0 0 0 23.3688 4.00458 25.1812 0.107759 0.0664452 13.7465 10.0239 0 0.328299 0.132275 0.0662252 4.22062 0.264201 t 0 0 0 8.92144 49.7712 1.08696 80.9267 0 28.507 0.298329 9.78391 0.328299 99.3386 0.397351 17.6499 0.264201

M00216_2.00_shift4 (TBPL2)
; positions_7nt_m2 versus M00216_2.00 (TBPL2); m=14/24; ncol2=7; w=0; offset=0; strand=D; shift=4; score=0.504397; ----wwtwwAw----- ; cor=; Ncor= a 0 0 0 0 31.7192 37.7028 23.8466 53.2428 29.0314 71.578 28.9234 0 0 0 0 0 c 0 0 0 0 18.8577 11.0202 12.3251 0.0769087 0.0533106 7.85215 11.9969 0 0 0 0 0 g 0 0 0 0 17.0632 11.2429 12.3251 9.53399 6.94748 19.121 10.4296 0 0 0 0 0 t 0 0 0 0 32.36 40.0342 51.5031 37.1463 63.9678 1.44887 48.65 0 0 0 0 0

M01679_2.00_shift5 (M01679_2.00)
; positions_7nt_m2 versus M01679_2.00; m=15/24; ncol2=8; w=0; offset=1; strand=D; shift=5; score=0.503296; -----WWAwAwAT--- ; cor=; Ncor= a 0 0 0 0 0 72.3485 72.1698 75.621 64.8218 86.4201 32.4244 89.1199 6.27341 0 0 0 c 0 0 0 0 0 0.0344353 0.0277469 0.0269978 0.0269978 0.0269978 0.0269978 0.0269978 0.031211 0 0 0 g 0 0 0 0 0 0.0344353 0.0277469 0.0269978 0.0269978 0.0269978 0.0269978 0.0269978 0.031211 0 0 0 t 0 0 0 0 0 27.5826 27.7747 24.3251 35.1242 13.5259 67.5216 10.8261 93.6642 0 0 0

M09432_2.00_rc_shift3 (TBP,TBPL2_rc)
; positions_7nt_m2 versus M09432_2.00_rc (TBP,TBPL2_rc); m=16/24; ncol2=10; w=-1; offset=-1; strand=R; shift=3; score=0.493761; ---sytTTTATAk--- ; cor=; Ncor= a 0 0 0 4.69799 7.38255 24.1611 1.34228 22.8188 4.02685 86.5772 14.094 77.8523 2.01342 0 0 0 c 0 0 0 57.047 49.6644 15.4362 19.4631 2.68456 4.02685 4.02685 4.69799 8.72483 15.4362 0 0 0 g 0 0 0 30.8725 3.3557 0.671141 2.01342 3.3557 6.04027 4.69799 0 8.72483 54.3624 0 0 0 t 0 0 0 7.38255 39.5973 59.7315 77.1812 71.1409 85.906 4.69799 81.2081 4.69799 28.1879 0 0 0

M11491_2.00_shift5 (M11491_2.00)
; positions_7nt_m2 versus M11491_2.00; m=17/24; ncol2=15; w=0; offset=1; strand=D; shift=5; score=0.488157; -----sTATAWAwrss ; cor=; Ncor= a 0 0 0 0 0 15.6812 4.11311 90.4884 0.771208 91.0026 68.8946 92.545 57.0694 39.8458 14.3959 21.3368 c 0 0 0 0 0 37.2751 11.8252 0 2.57069 0 0 0.771208 0.514139 11.3111 34.7044 37.7892 g 0 0 0 0 0 39.0746 4.62725 0.514139 0.514139 1.28535 0 5.14139 11.3111 40.3599 38.5604 32.9049 t 0 0 0 0 0 7.96915 79.4344 8.99743 96.144 7.71208 31.1054 1.54242 31.1054 8.48329 12.3393 7.96915

M11388_2.00_shift5 (TBP,TBPL2)
; positions_7nt_m2 versus M11388_2.00 (TBP,TBPL2); m=18/24; ncol2=15; w=0; offset=1; strand=D; shift=5; score=0.488157; -----sTATAWAwrss ; cor=; Ncor= a 0 0 0 0 0 15.6812 4.11311 90.4884 0.771208 91.0026 68.8946 92.545 57.0694 39.8458 14.3959 21.3368 c 0 0 0 0 0 37.2751 11.8252 0 2.57069 0 0 0.771208 0.514139 11.3111 34.7044 37.7892 g 0 0 0 0 0 39.0746 4.62725 0.514139 0.514139 1.28535 0 5.14139 11.3111 40.3599 38.5604 32.9049 t 0 0 0 0 0 7.96915 79.4344 8.99743 96.144 7.71208 31.1054 1.54242 31.1054 8.48329 12.3393 7.96915

M00247_2.00_rc_shift2 (WT1_rc)
; positions_7nt_m2 versus M00247_2.00_rc (WT1_rc); m=19/24; ncol2=11; w=-2; offset=-2; strand=R; shift=2; score=0.486817; --aaaTaATATAt--- ; cor=; Ncor= a 0 0 32.4394 32.4394 52.5515 9.76394 60.642 90.0965 20.4433 99.8824 12.5045 72.436 22.2542 0 0 0 c 0 0 22.5202 22.5202 12.5098 9.86274 19.5498 0.0392063 0.0392063 0.0392063 12.9989 2.51901 12.5295 0 0 0 g 0 0 22.5202 22.5202 12.5098 0.0392063 0.0392063 0.0392063 0.0392063 0.0392063 2.51901 2.51901 12.5295 0 0 0 t 0 0 22.5202 22.5202 22.4289 80.3341 19.769 9.8251 79.4782 0.0392063 71.9777 22.526 52.6869 0 0 0

M01567_2.00_shift4 (TBPL2)
; positions_7nt_m2 versus M01567_2.00 (TBPL2); m=20/24; ncol2=7; w=0; offset=0; strand=D; shift=4; score=0.486009; ----wwwwtAw----- ; cor=; Ncor= a 0 0 0 0 31.5311 34.5705 27.1982 58.3542 21.9565 93.4996 42.2777 0 0 0 0 0 c 0 0 0 0 18.9343 14.1966 11.058 0.086859 0.643432 0.0353646 0.0470878 0 0 0 0 0 g 0 0 0 0 20.7174 21.1788 15.5359 11.0954 18.8981 5.19636 9.52823 0 0 0 0 0 t 0 0 0 0 28.8172 30.0541 46.2079 30.4636 58.502 1.26866 48.147 0 0 0 0 0

M11390_2.00_shift6 (TBP,TBPL2)
; positions_7nt_m2 versus M11390_2.00 (TBP,TBPL2); m=21/24; ncol2=8; w=0; offset=2; strand=D; shift=6; score=0.485752; ------tATAAATw-- ; cor=; Ncor= a 0 0 0 0 0 0 6.38298 72.3404 0 100 100 85.1064 6.38298 44.6809 0 0 c 0 0 0 0 0 0 8.51064 0 0 0 0 2.12766 6.38298 8.51064 0 0 g 0 0 0 0 0 0 19.1489 12.766 0 0 0 8.51064 12.766 8.51064 0 0 t 0 0 0 0 0 0 65.9574 14.8936 100 0 0 4.25532 74.4681 38.2979 0 0

M00248_2.00_shift1 (WT1)
; positions_7nt_m2 versus M00248_2.00 (WT1); m=22/24; ncol2=13; w=-3; offset=-3; strand=D; shift=1; score=0.48182; -aaTaTTATATkta-- ; cor=; Ncor= a 0 32.4631 39.6939 9.99275 65.2095 22.5183 0.0408538 69.7375 0.0408538 82.7733 4.93882 15.0481 19.9776 32.2609 0 0 c 0 22.5123 20.102 9.99275 14.9523 2.46114 0.0408538 0.0408538 10.3863 2.52855 4.93882 15.0481 19.9776 22.5797 0 0 g 0 22.5123 20.102 9.99275 5.06322 2.46114 0.0408538 9.68195 0.0408538 2.52855 4.93882 44.8494 19.9776 22.5797 0 0 t 0 22.5123 20.102 70.0218 14.775 72.5594 99.8774 20.5397 89.532 12.1696 85.1835 25.0544 40.0671 22.5797 0 0

M07738_2.00_shift5 (ZNF649)
; positions_7nt_m2 versus M07738_2.00 (ZNF649); m=23/24; ncol2=6; w=0; offset=1; strand=D; shift=5; score=0.44268; -----TTATAT----- ; cor=; Ncor= a 0 0 0 0 0 0.0515464 0.0515464 99.8454 0.0515464 99.8454 0.0515464 0 0 0 0 0 c 0 0 0 0 0 0.0515464 0.0515464 0.0515464 0.0515464 0.0515464 0.0515464 0 0 0 0 0 g 0 0 0 0 0 0.0515464 0.0515464 0.0515464 0.0515464 0.0515464 0.0515464 0 0 0 0 0 t 0 0 0 0 0 99.8454 99.8454 0.0515464 99.8454 0.0515464 99.8454 0 0 0 0 0

M08377_2.00_rc_shift3 (ZSCAN16_rc)
; positions_7nt_m2 versus M08377_2.00_rc (ZSCAN16_rc); m=24/24; ncol2=24; w=-1; offset=-1; strand=R; shift=3; score=0.441358; ---AyATATAYAyAyA ; cor=; Ncor= a 0 0 0 84.6715 3.2847 82.8467 2.9197 94.1606 5.4745 95.6204 0 89.0511 4.0146 97.4453 0 96.7153 c 0 0 0 0 27.7372 2.9197 12.7737 0 17.5182 0 27.3723 0.7299 42.3358 1.4599 55.1095 2.9197 g 0 0 0 9.1241 5.8394 14.2336 1.0949 5.8394 1.8248 4.3796 0 7.6642 0 0.7299 4.7445 0.365 t 0 0 0 6.2044 63.1387 0 83.2117 0 75.1825 0 72.6277 2.5547 53.6496 0.365 40.146 0

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv5_m4_shift7 ; 166 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv5_m4_shift7 (oligos_7nt_mkv5_m4)
; oligos_7nt_mkv5_m4; m=0 (reference); ncol1=12; shift=7; ncol=19; -------ccaCTCCCACmc ; Alignment reference a 0 0 0 0 0 0 0 2712 2230 8437 217 665 194 457 167 10516 248 3344 1807 c 0 0 0 0 0 0 0 4747 5377 2417 11812 939 11859 11737 12049 951 11386 4163 5494 g 0 0 0 0 0 0 0 2429 2815 830 267 349 274 133 140 346 665 2422 2557 t 0 0 0 0 0 0 0 2641 2107 845 233 10576 202 202 173 716 230 2600 2671

M05860_2.00_shift7 (M05860_2.00)
; oligos_7nt_mkv5_m4 versus M05860_2.00; m=1/165; ncol2=13; w=0; offset=0; strand=D; shift=7; score=0.728515; -------cymCGCCCmCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 22.4 21 32.6 1 22.2 0.1 0.1 0.1 64.5 0.1 12.8 3.5 c 0 0 0 0 0 0 0 32.3 31.8 51.5 93.5 0.7 99.7 99.8 92.1 35.1 99.8 3.2 71.6 g 0 0 0 0 0 0 0 22.9 19.3 8.6 0.9 69.5 0.1 0.1 0.1 0.2 0.1 71 7.5 t 0 0 0 0 0 0 0 22.4 27.9 7.3 4.6 7.6 0.1 0.1 7.7 0.1 0.1 13.1 17.5

M06073_2.00_shift7 (M06073_2.00)
; oligos_7nt_mkv5_m4 versus M06073_2.00; m=2/165; ncol2=14; w=0; offset=0; strand=D; shift=7; score=0.721628; -------mcmCrCCCmCrc ; cor=; Ncor= a 0 0 0 0 0 0 0 27.4252 23.9949 36.4842 8.51155 32.763 1.62532 0 1.66809 67.408 0.342173 30.8811 15.6544 c 0 0 0 0 0 0 0 32.4569 37.3824 47.6476 81.9076 3.89222 98.3747 100 83.2763 29.8118 99.6578 13.6869 59.0248 g 0 0 0 0 0 0 0 20.8976 15.0128 6.97177 3.84944 51.0693 0 0 0 0.25663 0 46.1078 9.83747 t 0 0 0 0 0 0 0 19.2203 23.6099 8.89649 5.73139 12.2754 0 0 15.0556 2.52352 0 9.32421 15.4833

M09515_2.00_shift8 (M09515_2.00)
; oligos_7nt_mkv5_m4 versus M09515_2.00; m=3/165; ncol2=12; w=0; offset=1; strand=D; shift=8; score=0.71893; --------cmCrCCCACrc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.4 32.9 1.4 25.3 0.1 0.1 0.1 86.1 0.1 25.5 2.6 c 0 0 0 0 0 0 0 0 35.7 51.3 95.3 0.1 99.7 99.7 94.3 13.7 99.7 3.5 67.8 g 0 0 0 0 0 0 0 0 19.2 6.6 0.1 58.7 0.1 0.1 0.1 0.1 0.1 55.2 18.2 t 0 0 0 0 0 0 0 0 24.8 9.2 3.2 15.9 0.1 0.1 5.5 0.1 0.1 15.8 11.4

M08994_2.00_shift6 (M08994_2.00)
; oligos_7nt_mkv5_m4 versus M08994_2.00; m=4/165; ncol2=14; w=-1; offset=-1; strand=D; shift=6; score=0.716387; ------ccyCCrCCCMCrC ; cor=; Ncor= a 0 0 0 0 0 0 10.6 17.6 11 19 3.2 32 0 1 0.8 68.2 1.8 31.2 4.4 c 0 0 0 0 0 0 50 52.8 54.2 73 92.4 1.4 98 98.4 92.6 29.6 95 6.8 72.8 g 0 0 0 0 0 0 17 10.8 9.6 0.8 1.6 41.8 1.8 0.4 0.4 1.4 1.2 39.8 13.4 t 0 0 0 0 0 0 22.4 18.8 25.2 7.2 2.8 24.8 0.2 0.2 6.2 0.8 2 22.2 9.4

M06072_2.00_shift7 (M06072_2.00)
; oligos_7nt_mkv5_m4 versus M06072_2.00; m=5/165; ncol2=14; w=0; offset=0; strand=D; shift=7; score=0.705397; -------hmmCGCCCmCvy ; cor=; Ncor= a 0 0 0 0 0 0 0 27.7778 26.3158 47.3684 10.5263 15.7895 0 0 0 57.8947 0 31.5789 10.5263 c 0 0 0 0 0 0 0 44.4444 47.3684 47.3684 84.2105 0 100 94.7368 100 36.8421 100 26.3158 52.6316 g 0 0 0 0 0 0 0 0 21.0526 5.26316 0 73.6842 0 5.26316 0 0 0 42.1053 5.26316 t 0 0 0 0 0 0 0 27.7778 5.26316 0 5.26316 10.5263 0 0 0 5.26316 0 0 31.5789

M02898_2.00_shift6 (SP6,SP8)
; oligos_7nt_mkv5_m4 versus M02898_2.00 (SP6,SP8); m=6/165; ncol2=12; w=-1; offset=-1; strand=D; shift=6; score=0.684503; ------rmCACgCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 0 31.1377 31.5789 12.1951 78.6982 3.88889 9.32836 2.77778 1.16279 0 51.1364 5.41667 18.6747 0 c 0 0 0 0 0 0 16.1677 66.0819 81.4634 19.5266 92.7778 13.806 92.7778 97.093 89.7849 43.75 69.5833 31.3253 0 g 0 0 0 0 0 0 46.7066 0 0 0.591716 0.555556 62.3134 3.33333 1.74419 2.15054 3.40909 8.75 0.60241 0 t 0 0 0 0 0 0 5.98802 2.33918 6.34146 1.18343 2.77778 14.5522 1.11111 0 8.06452 1.70455 16.25 49.3976 0

M04511_2.00_shift6 (KLF15)
; oligos_7nt_mkv5_m4 versus M04511_2.00 (KLF15); m=7/165; ncol2=12; w=-1; offset=-1; strand=D; shift=6; score=0.681779; ------vccmCgCCCmcc- ; cor=; Ncor= a 0 0 0 0 0 0 29.0396 21.2916 15.9457 54.3609 0 19.6352 0.665188 3.79702 1.63279 36.4374 11.0315 17.5305 0 c 0 0 0 0 0 0 25.3811 52.9566 65.996 34.7006 96.8981 23.1277 96.9697 93.1157 87.4375 48.7021 64.9423 48.3232 0 g 0 0 0 0 0 0 34.4893 12.1695 5.5332 3.43899 0 50.9119 0.406504 2.37757 2.53249 4.34783 7.1985 12.5381 0 t 0 0 0 0 0 0 11.0899 13.5822 12.5252 7.49948 3.10192 6.32518 1.95861 0.709723 8.3972 10.5127 16.8277 21.6082 0

M00776_2.00_shift9 (M00776_2.00)
; oligos_7nt_mkv5_m4 versus M00776_2.00; m=8/165; ncol2=10; w=0; offset=2; strand=D; shift=9; score=0.680919; ---------mcgCCCmCgy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 28.0343 15.9193 23.9553 8.00057 1.93417 3.06438 62.2598 2.16924 21.9875 14.4571 c 0 0 0 0 0 0 0 0 0 40.1824 56.1223 8.72499 89.078 91.8062 79.0315 27.6968 92.2383 7.03203 46.117 g 0 0 0 0 0 0 0 0 0 12.2243 9.27695 49.2146 0.00744296 5.58274 1.29673 5.37263 2.25777 55.1731 13.3455 t 0 0 0 0 0 0 0 0 0 19.5589 18.6815 18.1051 2.91396 0.67684 16.6074 4.67074 3.33468 15.8074 26.0804

M03706_2.00_shift6 (M03706_2.00)
; oligos_7nt_mkv5_m4 versus M03706_2.00; m=9/165; ncol2=13; w=-1; offset=-1; strand=D; shift=6; score=0.677924; ------GmCACGCCCmCyy ; cor=; Ncor= a 0 0 0 0 0 0 23.3211 37.4477 0.930714 69.7044 4.95466 22.5231 0.383944 1.1708 0.880339 28.9079 2.44621 18.8759 22.0495 c 0 0 0 0 0 0 4.34676 56.3408 97.5526 8.34975 91.6451 0.479945 98.7784 97.4518 92.2726 65.3429 83.407 37.5044 32.1555 g 0 0 0 0 0 0 69.1087 1.99084 0.620476 21.5025 2.16969 74.4943 0.383944 0.65427 0.945549 0.577234 0.825228 8.16543 11.6254 t 0 0 0 0 0 0 3.22344 4.22059 0.896243 0.44335 1.23057 2.50257 0.453752 0.72314 5.90153 5.17202 13.3215 35.4542 34.1696

M04513_2.00_shift6 (KLF15)
; oligos_7nt_mkv5_m4 versus M04513_2.00 (KLF15); m=10/165; ncol2=12; w=-1; offset=-1; strand=D; shift=6; score=0.672715; ------rcCmCrCCCmcc- ; cor=; Ncor= a 0 0 0 0 0 0 28.524 19.4706 14.8438 61.7341 3.34436 26.8483 3.79323 5.3418 6.84564 33.1376 11.742 21.0788 0 c 0 0 0 0 0 0 15.5473 63.1813 75.3437 31.1753 88.6071 11.12 89.6616 90.0635 80.906 55.3028 67.6831 45.1452 0 g 0 0 0 0 0 0 49.5025 6.36792 2.3125 3.19846 1.94781 48.307 1.3016 2.24131 4.83221 2.89908 3.75044 9.50207 0 t 0 0 0 0 0 0 6.4262 10.9801 7.5 3.8921 6.1007 13.7247 5.24358 2.35338 7.41611 8.66055 16.8244 24.2739 0

M09034_2.00_rc_shift7 (E2F6_rc)
; oligos_7nt_mkv5_m4 versus M09034_2.00_rc (E2F6_rc); m=11/165; ncol2=13; w=0; offset=0; strand=R; shift=7; score=0.661288; -------yyyyTCCCGCCy ; cor=; Ncor= a 0 0 0 0 0 0 0 13.6 12.6 7 1.6 1.2 1.2 3.2 4.8 6.6 1 2 14.8 c 0 0 0 0 0 0 0 42.6 37.8 43.8 43.6 1.4 87.2 89.6 89.4 1.2 96.4 70 55.6 g 0 0 0 0 0 0 0 16.2 21.8 10.8 3.6 3.2 4.4 4.8 1.8 70.8 1.6 12.6 3.4 t 0 0 0 0 0 0 0 27.6 27.8 38.4 51.2 94.2 7.2 2.4 4 21.4 1 15.4 26.2

M08107_2.00_rc_shift8 (E2F6_rc)
; oligos_7nt_mkv5_m4 versus M08107_2.00_rc (E2F6_rc); m=12/165; ncol2=11; w=0; offset=1; strand=R; shift=8; score=0.656781; --------byyTCCCGCCy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 13.4567 6.52884 0 0 0 0 0 4.75154 0 0 16.6485 c 0 0 0 0 0 0 0 0 32.9706 41.1679 38.8466 0 98.2227 100 99.7461 0 100 69.2419 50.9975 g 0 0 0 0 0 0 0 0 25.6075 16.4672 0 0 1.05187 0 0 70.8741 0 14.7262 2.9017 t 0 0 0 0 0 0 0 0 27.9652 35.8361 61.1534 100 0.725426 0 0.253899 24.3743 0 16.0319 29.4523

M04438_2.00_shift8 (EGR1)
; oligos_7nt_mkv5_m4 versus M04438_2.00 (EGR1); m=13/165; ncol2=13; w=0; offset=1; strand=D; shift=8; score=0.65457; --------cmCrCCCmCgc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.812 28.5357 7.63283 29.7004 2.48685 4.75973 4.16748 54.8634 0.170648 22.7166 8.27459 c 0 0 0 0 0 0 0 0 41.1735 47.1176 78.0531 7.48997 94.1416 90.0915 77.0299 32.5111 95.9776 13.8829 66.0792 g 0 0 0 0 0 0 0 0 16.2306 10.4727 2.55749 46.4378 0.908656 2.746 4.40227 6.24303 0 42.2063 8.17388 t 0 0 0 0 0 0 0 0 22.7838 13.8739 11.7565 16.3718 2.46294 2.40275 14.4003 6.38239 3.85178 21.1943 17.4723

M04645_2.00_shift6 (SP6,SP9)
; oligos_7nt_mkv5_m4 versus M04645_2.00 (SP6,SP9); m=14/165; ncol2=12; w=-1; offset=-1; strand=D; shift=6; score=0.653469; ------rcCmCGCCCmcy- ; cor=; Ncor= a 0 0 0 0 0 0 34.0131 14.7242 10.1294 65.7105 0.0806777 6.95222 0.8846 0 1.33288 41.9423 6.64311 17.1359 0 c 0 0 0 0 0 0 17.9445 63.7617 77.343 30.2145 98.8705 6.58979 98.5525 98.7908 83.7662 44.2998 65.8304 47.6132 0 g 0 0 0 0 0 0 38.8254 8.0385 3.56579 1.50134 0.68576 80.7578 0 0 0.820232 1.33709 6.74912 8.32313 0 t 0 0 0 0 0 0 9.21697 13.4755 8.96182 2.57373 0.36305 5.70016 0.562927 1.20919 14.0807 12.4208 20.7774 26.9278 0

M08398_2.00_shift5 (KLF14)
; oligos_7nt_mkv5_m4 versus M08398_2.00 (KLF14); m=15/165; ncol2=14; w=-2; offset=-2; strand=D; shift=5; score=0.653429; -----ggcCmCGCCCmCyy ; cor=; Ncor= a 0 0 0 0 0 22.5873 11.9097 9.2402 4.3121 37.7823 0 13.963 0 0 0 41.6838 2.6694 13.347 13.7577 c 0 0 0 0 0 13.7577 14.5791 60.9856 79.4661 61.3963 99.5893 0 100 100 92.4025 49.076 74.1273 45.9959 34.7023 g 0 0 0 0 0 57.2895 67.3511 7.3922 4.3121 0.8214 0 77.2074 0 0 0 0.8214 4.7228 8.0082 20.1232 t 0 0 0 0 0 6.3655 6.1602 22.3819 11.9097 0 0.4107 8.8296 0 0 7.5975 8.4189 18.4805 32.6489 31.4168

M04518_2.00_shift6 (SP6,SP8)
; oligos_7nt_mkv5_m4 versus M04518_2.00 (SP6,SP8); m=16/165; ncol2=12; w=-1; offset=-1; strand=D; shift=6; score=0.652897; ------rcCACGCCCmcy- ; cor=; Ncor= a 0 0 0 0 0 0 28.6296 24.4087 12.157 82.827 0 6.50407 0 0 0.384123 42.989 10.6603 18.6959 0 c 0 0 0 0 0 0 10.7998 49.3961 68.1834 16.2447 100 0 99.6953 99.5941 83.7815 43.2967 62.1925 41.0087 0 g 0 0 0 0 0 0 48.4972 9.1847 10.1077 0 0 88.6631 0 0.405885 0.810926 0.659341 4.57488 11.6658 0 t 0 0 0 0 0 0 12.0734 17.0106 9.55193 0.92827 0 4.83288 0.304723 0 15.0235 13.0549 22.5723 28.6296 0

M04628_2.00_shift7 (ZNF460)
; oligos_7nt_mkv5_m4 versus M04628_2.00 (ZNF460); m=17/165; ncol2=13; w=0; offset=0; strand=D; shift=7; score=0.652362; -------caaCgCCCCCCs ; cor=; Ncor= a 0 0 0 0 0 0 0 15.4613 40.5896 59.0674 9.85222 9.84802 3.35946 5.41761 3.78198 7.64263 5.35308 2.81532 23.9674 c 0 0 0 0 0 0 0 47.8803 24.8677 23.9378 78.9163 20.6687 89.6976 90.4063 89.099 86.2217 91.2301 90.2027 26.925 g 0 0 0 0 0 0 0 23.5661 19.9546 9.63731 3.94089 48.693 1.34378 0.790068 4.33815 3.12164 1.93622 2.81532 40.8465 t 0 0 0 0 0 0 0 13.0923 14.5881 7.35751 7.29064 20.7903 5.5991 3.386 2.78087 3.01399 1.48064 4.16667 8.26109

M04517_2.00_shift6 (SP6,SP8)
; oligos_7nt_mkv5_m4 versus M04517_2.00 (SP6,SP8); m=18/165; ncol2=12; w=-1; offset=-1; strand=D; shift=6; score=0.65167; ------rcCMCGCCCmcy- ; cor=; Ncor= a 0 0 0 0 0 0 34.3794 20.4684 8.29254 69.9729 0.139373 7.67123 0.209278 0.209497 0.0941029 44.6849 7.16262 22.426 0 c 0 0 0 0 0 0 15.2327 57.7597 81.6585 27.8559 98.8153 2.86149 98.9187 99.0223 88.9586 44.2458 66.7384 38.3639 0 g 0 0 0 0 0 0 37.4824 9.47047 0.950187 0.542808 0.278746 86.3318 0 0.628492 1.12923 0.627156 5.68706 9.69676 0 t 0 0 0 0 0 0 12.9055 12.3014 9.09876 1.62842 0.766551 3.13546 0.871992 0.139665 9.81807 10.4421 20.4119 29.5134 0

M04646_2.00_shift6 (SP6,SP9)
; oligos_7nt_mkv5_m4 versus M04646_2.00 (SP6,SP9); m=19/165; ncol2=12; w=-1; offset=-1; strand=D; shift=6; score=0.649946; ------rcCACGCCCmcy- ; cor=; Ncor= a 0 0 0 0 0 0 33.7393 14.4853 8.6369 82.2039 0 9.06832 0 2.87278 0 47.0257 6.99482 17.1203 0 c 0 0 0 0 0 0 9.67049 64.9744 81.9624 15.4979 99.2883 0 98.5169 95.4172 84.1375 40.3882 67.8756 45.8453 0 g 0 0 0 0 0 0 50 5.49604 4.52409 0 0 86.646 0.353107 1.70999 1.62847 0.939261 2.65544 6.94842 0 t 0 0 0 0 0 0 6.59026 15.0442 4.87662 2.29817 0.711744 4.28571 1.12994 0 14.234 11.6468 22.4741 30.086 0

M06118_2.00_shift5 (SP6)
; oligos_7nt_mkv5_m4 versus M06118_2.00 (SP6); m=20/165; ncol2=14; w=-2; offset=-2; strand=D; shift=5; score=0.647864; -----ggycmCGCCCmcyy ; cor=; Ncor= a 0 0 0 0 0 18.1996 12.1429 16.1458 15.9722 51.0417 2.60417 6.77083 1.21528 1.73611 1.5625 47.0486 10.2431 13.1944 13.0742 c 0 0 0 0 0 17.4168 5.35714 45.1389 58.8542 48.7847 96.875 0 98.7847 97.7431 85.7639 41.1458 61.8056 31.25 30.9187 g 0 0 0 0 0 45.4012 65.8929 11.4583 2.77778 0.173611 0 88.5417 0 0 0 0.347222 5.72917 12.8472 24.735 t 0 0 0 0 0 18.9824 16.6071 27.2569 22.3958 0 0.520833 4.6875 0 0.520833 12.6736 11.4583 22.2222 42.7083 31.2721

M00230_2.00_shift9 (EGR2)
; oligos_7nt_mkv5_m4 versus M00230_2.00 (EGR2); m=21/165; ncol2=10; w=0; offset=2; strand=D; shift=9; score=0.646653; ---------mcrCCCmccy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.4696 12.7214 30.8306 6.07116 0.756708 7.19322 39.7106 8.59421 16.1831 12.8811 c 0 0 0 0 0 0 0 0 0 37.5897 53.1588 7.45219 86.795 95.7003 69.626 41.7466 67.4299 63.6863 47.7397 g 0 0 0 0 0 0 0 0 0 12.5125 11.1706 43.7507 0.00921935 3.22593 2.41848 9.03963 6.49536 5.77749 10.1326 t 0 0 0 0 0 0 0 0 0 19.4283 22.9492 17.9665 7.12457 0.317024 20.7623 9.50311 17.4805 14.3531 29.2466

M08996_2.00_shift7 (M08996_2.00)
; oligos_7nt_mkv5_m4 versus M08996_2.00; m=22/165; ncol2=14; w=0; offset=0; strand=D; shift=7; score=0.639039; -------cyCCgCCCmCgC ; cor=; Ncor= a 0 0 0 0 0 0 0 10.5691 10.3659 16.8699 0.406504 23.9837 0 0.609756 0 44.9187 1.01626 16.2602 1.42276 c 0 0 0 0 0 0 0 57.7236 54.878 77.8455 98.9837 0 100 98.9837 96.3415 54.4715 98.7805 1.21951 89.6341 g 0 0 0 0 0 0 0 9.7561 8.53659 2.84553 0.609756 61.1789 0 0.406504 0.203252 0.203252 0 67.0732 3.86179 t 0 0 0 0 0 0 0 21.9512 26.2195 2.43902 0 14.8374 0 0 3.45528 0.406504 0.203252 15.4472 5.0813

M00133_2.00_shift8 (M00133_2.00)
; oligos_7nt_mkv5_m4 versus M00133_2.00; m=23/165; ncol2=10; w=0; offset=1; strand=D; shift=8; score=0.638121; --------cmCgCCCmcy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.0214 42.3407 2.97602 15.6909 0.0767376 0.0263797 0.0433909 29.6789 10.202 20.7575 0 c 0 0 0 0 0 0 0 0 45.8577 50.1866 90.9753 1.40928 98.7545 99.967 83.3039 56.2855 54.1945 29.7523 0 g 0 0 0 0 0 0 0 0 11.8882 2.87413 2.48578 66.892 0.00389772 0.00304224 0.00127157 1.35045 11.9721 14.923 0 t 0 0 0 0 0 0 0 0 21.2327 4.59858 3.56295 16.0079 1.1649 0 16.6514 12.6852 23.6315 34.5672 0

M00735_2.00_shift7 (RBPJ)
; oligos_7nt_mkv5_m4 versus M00735_2.00 (RBPJ); m=24/165; ncol2=10; w=0; offset=0; strand=D; shift=7; score=0.636698; -------wrgtTCcCAy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 27.8506 25.5779 22.1091 12.4309 8.20288 3.09718 17.5109 0.295543 73.1076 14.7909 0 0 c 0 0 0 0 0 0 0 23.2627 21.5792 15.2715 20.4952 5.89724 89.1653 53.6683 93.79 4.76803 39.8058 0 0 g 0 0 0 0 0 0 0 22.1282 28.268 37.9394 15.6456 1.59119 1.31061 8.27156 2.72116 12.3287 19.767 0 0 t 0 0 0 0 0 0 0 26.7585 24.575 24.6799 51.4283 84.3087 6.4269 20.5492 3.19331 9.7956 25.6364 0 0

M08979_2.00_shift8 (M08979_2.00)
; oligos_7nt_mkv5_m4 versus M08979_2.00; m=25/165; ncol2=10; w=0; offset=1; strand=D; shift=8; score=0.635806; --------CcCwCCChsc- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 4.4 22.6 0.4 58.6 1.4 1.2 1.4 29 13 16.8 0 c 0 0 0 0 0 0 0 0 81.4 66 98.8 1 80.4 98.2 97.2 34.4 47.8 51.4 0 g 0 0 0 0 0 0 0 0 2.4 1.6 0.2 3 16.2 0.4 0.2 0.6 25.8 13.8 0 t 0 0 0 0 0 0 0 0 11.8 9.8 0.6 37.4 2 0.2 1.2 36 13.4 18 0

M08866_2.00_shift8 (SALL4)
; oligos_7nt_mkv5_m4 versus M08866_2.00 (SALL4); m=26/165; ncol2=10; w=0; offset=1; strand=D; shift=8; score=0.635806; --------CcCwCCChsc- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 4.4 22.6 0.4 58.6 1.4 1.2 1.4 29 13 16.8 0 c 0 0 0 0 0 0 0 0 81.4 66 98.8 1 80.4 98.2 97.2 34.4 47.8 51.4 0 g 0 0 0 0 0 0 0 0 2.4 1.6 0.2 3 16.2 0.4 0.2 0.6 25.8 13.8 0 t 0 0 0 0 0 0 0 0 11.8 9.8 0.6 37.4 2 0.2 1.2 36 13.4 18 0

M00737_2.00_shift7 (RBPJ)
; oligos_7nt_mkv5_m4 versus M00737_2.00 (RBPJ); m=27/165; ncol2=10; w=0; offset=0; strand=D; shift=7; score=0.635018; -------wdgtTCcCAy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 28.2141 25.496 22.4711 12.3771 7.58508 2.77954 16.9027 0.190065 75.4657 14.0786 0 0 c 0 0 0 0 0 0 0 23.5664 21.0842 14.7646 19.8032 4.74069 90.2231 55.0078 94.5958 4.27883 39.8314 0 0 g 0 0 0 0 0 0 0 21.1116 28.1775 38.1769 14.5246 1.51616 1.28696 7.44449 2.38599 11.2873 20.1793 0 0 t 0 0 0 0 0 0 0 27.1078 25.2423 24.5873 53.2951 86.1581 5.71038 20.645 2.82812 8.96814 25.9107 0 0

M00741_2.00_shift7 (RBPJ)
; oligos_7nt_mkv5_m4 versus M00741_2.00 (RBPJ); m=28/165; ncol2=10; w=0; offset=0; strand=D; shift=7; score=0.634305; -------wdgtTCcCAy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 28.3162 25.3065 21.1527 11.9841 7.61753 2.54559 17.0959 0.0667604 75.729 14.2366 0 0 c 0 0 0 0 0 0 0 23.1833 21.1378 15.8278 19.7584 5.20933 90.4106 55.0829 94.9504 4.46898 40.2783 0 0 g 0 0 0 0 0 0 0 21.8333 28.2491 38.9301 15.0831 1.5075 1.2641 7.7589 2.25546 11.3267 19.8026 0 0 t 0 0 0 0 0 0 0 26.6672 25.3065 24.0893 53.1744 85.6656 5.77975 20.0622 2.72741 8.47534 25.6826 0 0

M04437_2.00_shift8 (EGR1)
; oligos_7nt_mkv5_m4 versus M04437_2.00 (EGR1); m=29/165; ncol2=13; w=0; offset=1; strand=D; shift=8; score=0.632519; --------cmCrCCCmCgC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.713 33.137 9.66458 31.2385 1.54779 2.98439 5.56261 59.4771 0.032352 17.4956 7.29218 c 0 0 0 0 0 0 0 0 39.8983 41.6636 73.5642 8.67825 97.2874 93.3119 77.4321 33.5479 98.625 13.0649 74.9754 g 0 0 0 0 0 0 0 0 15.8413 12.5506 6.11728 48.8111 0.191479 1.72942 1.0414 4.23373 0.210288 60.1638 5.01722 t 0 0 0 0 0 0 0 0 19.5474 12.6488 10.654 11.2721 0.973352 1.97429 15.9639 2.7412 1.13232 9.27571 12.7152

M00736_2.00_shift7 (RBPJ)
; oligos_7nt_mkv5_m4 versus M00736_2.00 (RBPJ); m=30/165; ncol2=10; w=0; offset=0; strand=D; shift=7; score=0.632075; -------wdktTCcCAc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 29.4154 26.4036 22.1158 11.8797 7.13126 1.69033 15.6352 0.148656 77.126 14.8806 0 0 c 0 0 0 0 0 0 0 22.0105 21.8347 14.1017 18.0804 5.66602 91.3706 56.2342 94.0548 4.50614 42.5236 0 0 g 0 0 0 0 0 0 0 21.1474 25.8808 35.3852 12.3645 1.19064 0.798455 7.02535 2.39618 10.8638 17.8153 0 0 t 0 0 0 0 0 0 0 27.4267 25.8808 28.3973 57.6754 86.0121 6.14061 21.1053 3.40035 7.50403 24.7805 0 0

M04559_2.00_shift5 (SP3,SP6)
; oligos_7nt_mkv5_m4 versus M04559_2.00 (SP3,SP6); m=31/165; ncol2=13; w=-2; offset=-2; strand=D; shift=5; score=0.632062; -----sgCCMCGCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 18.12 23.453 11.418 5.5243 73.9408 0 14.5351 0 0 0.185874 48.8032 4.24892 21.0642 0 c 0 0 0 0 0 30.96 6.35643 77.1332 85.2344 25.9592 100 0 99.4628 100 84.4711 42.5361 75.2961 41.0082 0 g 0 0 0 0 0 26.08 60.8498 3.00879 1.15942 0.019984 0 70.9581 0.0198965 0 0 0.511602 1.74845 7.9816 0 t 0 0 0 0 0 24.84 9.34075 8.44006 8.08184 0.0799361 0 14.5067 0.51731 0 15.343 8.1491 18.7065 29.946 0

M04439_2.00_shift8 (EGR2)
; oligos_7nt_mkv5_m4 versus M04439_2.00 (EGR2); m=32/165; ncol2=13; w=0; offset=1; strand=D; shift=8; score=0.63193; --------mmCrCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.001 40.4671 0.527831 25.1462 0 0.202327 1.18203 86.007 0 15.5957 0.790861 c 0 0 0 0 0 0 0 0 40.446 43.3121 94.6737 1.00715 99.7472 99.7977 77.7384 13.8187 99.8482 2.85199 86.6872 g 0 0 0 0 0 0 0 0 12.367 5.64756 1.53551 64.1001 0.252781 0 0.197006 0.174368 0 71.2274 1.53779 t 0 0 0 0 0 0 0 0 21.186 10.5732 3.26296 9.74659 0 0 20.8826 0 0.151822 10.3249 10.9842

M04440_2.00_shift8 (EGR2)
; oligos_7nt_mkv5_m4 versus M04440_2.00 (EGR2); m=33/165; ncol2=13; w=0; offset=1; strand=D; shift=8; score=0.630984; --------hmCGCCCACrC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.0908 42.3604 0.683956 12.222 0.346821 0.318011 0.110865 98.7931 0.0290782 27.4909 0.983757 c 0 0 0 0 0 0 0 0 30.7155 51.7798 97.9766 0.342215 99.3642 99.3929 95.2882 1.2069 99.9709 0.138145 78.6548 g 0 0 0 0 0 0 0 0 14.6015 1.80723 0.427472 84.0381 0.0289017 0 0.332594 0 0 59.368 6.17708 t 0 0 0 0 0 0 0 0 28.5922 4.05257 0.911941 3.3977 0.260116 0.289101 4.26829 0 0 13.0029 14.1844

M04514_2.00_shift6 (KLF15)
; oligos_7nt_mkv5_m4 versus M04514_2.00 (KLF15); m=34/165; ncol2=12; w=-1; offset=-1; strand=D; shift=6; score=0.629824; ------GCCMCGCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 0 22.0614 15.9576 2.97039 68.0475 0 8.01932 0 0 0 34.3078 3.20988 21.9548 0 c 0 0 0 0 0 0 0 81.541 87.8529 31.9525 100 0 100 100 93.6858 61.6939 75.7059 34.0573 0 g 0 0 0 0 0 0 75.7569 0 2.87204 0 0 86.2995 0 0 0 0 0.901771 12.7407 0 t 0 0 0 0 0 0 2.18166 2.50137 6.30471 0 0 5.68116 0 0 6.31424 3.99828 20.1825 31.2472 0

M05849_2.00_shift9 (ZNF282)
; oligos_7nt_mkv5_m4 versus M05849_2.00 (ZNF282); m=35/165; ncol2=11; w=0; offset=2; strand=D; shift=9; score=0.628428; ---------cmTCCCaCAC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 18.8119 44.5545 9.901 8.9109 0 0 54.4554 0 69.3069 0 c 0 0 0 0 0 0 0 0 0 45.5446 41.5842 1.9802 90.099 100 99.0099 6.9307 96.0396 24.7525 100 g 0 0 0 0 0 0 0 0 0 10.8911 3.9604 4.9505 0.9901 0 0.9901 24.7525 3.9604 2.9703 0 t 0 0 0 0 0 0 0 0 0 24.7525 9.901 83.1683 0 0 0 13.8614 0 2.9703 0

M02930_2.00_shift5 (KLF14)
; oligos_7nt_mkv5_m4 versus M02930_2.00 (KLF14); m=36/165; ncol2=14; w=-2; offset=-2; strand=D; shift=5; score=0.624278; -----krcCACGCCCmYyt ; cor=; Ncor= a 0 0 0 0 0 18.6632 33.2047 22.0453 0 89.5648 0.125 2.2439 0 0 0 41.8958 1.54664 13.9721 19.2353 c 0 0 0 0 0 9.3316 2.01157 56.9992 86.1066 7.13162 99.75 1.17073 99.8131 99.442 95.888 56.2317 70.7105 29.6407 21.9621 g 0 0 0 0 0 41.9271 62.8272 4.02347 0.538503 3.04143 0 95.5772 0.186916 0.185989 0.238379 0.0585138 0.724988 4.44112 9.30646 t 0 0 0 0 0 30.0781 1.95646 16.9321 13.3549 0.262192 0.125 1.00813 0 0.371978 3.87366 1.81393 27.0179 51.9461 49.4961

M04512_2.00_shift6 (KLF15)
; oligos_7nt_mkv5_m4 versus M04512_2.00 (KLF15); m=37/165; ncol2=12; w=-1; offset=-1; strand=D; shift=6; score=0.62188; ------rCCmCGCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 0 26.7918 15.1634 5.5098 65.5063 0.240964 13.6948 0.359368 0.120627 0.406939 26.0445 5.30621 13.4058 0 c 0 0 0 0 0 0 10.7319 70.854 81.1765 31.3766 99.759 1.54364 99.1854 99.8794 88.67 61.7603 71.1917 50.8454 0 g 0 0 0 0 0 0 51.6875 5.57933 9.43137 2.19937 0 81.9315 0.167705 0 0.321268 0.487805 3.16162 10.5556 0 t 0 0 0 0 0 0 10.7888 8.40322 3.88235 0.917722 0 2.83 0.287494 0 10.6018 11.7073 20.3405 25.1932 0

M00740_2.00_shift7 (RBPJ)
; oligos_7nt_mkv5_m4 versus M00740_2.00 (RBPJ); m=38/165; ncol2=10; w=0; offset=0; strand=D; shift=7; score= 0.6155; -------hrktTCcCAc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 25.2386 28.2624 16.951 10.9311 6.77878 4.75637 14.4817 3.90053 80.2786 16.0113 0 0 c 0 0 0 0 0 0 0 25.2386 14.9025 13.0701 20.118 5.22679 88.1892 58.1417 87.4541 2.1075 43.5232 0 0 g 0 0 0 0 0 0 0 14.4165 32.5095 43.3943 8.51316 0.305379 0.0992102 3.50042 0.221156 5.84451 15.852 0 0 t 0 0 0 0 0 0 0 35.1062 24.3256 26.5845 60.4377 87.6891 6.95517 23.8762 8.42424 11.7694 24.6135 0 0

M02886_2.00_shift7 (EGR2)
; oligos_7nt_mkv5_m4 versus M02886_2.00 (EGR2); m=39/165; ncol2=15; w=0; offset=0; strand=D; shift=7; score=0.613525; -------yhmCGCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 24.8517 26.3117 48.7763 0.897729 9.80359 0.159943 0.284495 0.353833 87.7621 0 3.52679 0.339789 c 0 0 0 0 0 0 0 29.8259 28.5412 41.1833 97.3068 0.822562 99.2003 99.2176 84.92 11.2903 99.679 1.74628 91.2504 g 0 0 0 0 0 0 0 19.1314 13.4922 2.33186 0.457666 82.3737 0.390972 0.302276 0 0.584677 0.249643 90.6865 0.30581 t 0 0 0 0 0 0 0 26.1909 31.6548 7.70861 1.33779 7.00017 0.2488 0.19559 14.7262 0.362903 0.0713267 4.0404 8.10398

M04658_2.00_shift5 (KLF14)
; oligos_7nt_mkv5_m4 versus M04658_2.00 (KLF14); m=40/165; ncol2=13; w=-2; offset=-2; strand=D; shift=5; score=0.612101; -----crcCaCrCCCmcc- ; cor=; Ncor= a 0 0 0 0 0 18.6657 35.0563 17.8602 3.48319 54.8431 1.55897 35.8318 0 0.333264 0.287186 35.8439 11.1429 20.7362 0 c 0 0 0 0 0 38.9313 10.1459 62.6548 88.8259 20.6916 98.0821 0 99.6665 99.5938 80.7754 50.5193 62.5422 41.0331 0 g 0 0 0 0 0 19.7218 44.6686 8.18319 1.66264 16.1782 0 52.0917 0 0.0729015 0.0675733 2.51964 5.99601 13.7927 0 t 0 0 0 0 0 22.6812 10.1292 11.3018 6.02824 8.28698 0.358974 12.0765 0.333507 0 18.8698 11.1171 20.3189 24.4379 0

M08358_2.00_shift8 (ZNF467)
; oligos_7nt_mkv5_m4 versus M08358_2.00 (ZNF467); m=41/165; ncol2=12; w=0; offset=1; strand=D; shift=8; score=0.611991; --------CCCTCCCCCyC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1.11257 0.850785 0.065445 0.065445 0.065445 1.37435 0.065445 0.065445 1.37435 18.6518 2.94503 c 0 0 0 0 0 0 0 0 74.411 87.7618 99.8037 0.065445 85.6675 93.5209 89.3325 84.3586 73.6257 34.8822 79.6466 g 0 0 0 0 0 0 0 0 4.25393 0.065445 0.065445 0.850785 3.46859 0.065445 1.11257 0.065445 1.63613 10.2749 5.03927 t 0 0 0 0 0 0 0 0 20.2225 11.322 0.065445 99.0183 10.7984 5.03927 9.48953 15.5105 23.3639 36.1911 12.3691

M02910_2.00_shift6 (SP3,SP6)
; oligos_7nt_mkv5_m4 versus M02910_2.00 (SP3,SP6); m=42/165; ncol2=11; w=-1; offset=-1; strand=D; shift=6; score=0.610301; ------sCCACrCCCmc-- ; cor=; Ncor= a 0 0 0 0 0 0 22.3999 17.6351 8.55439 71.6826 2.25957 26.1176 2.06696 2.5942 0.957055 43.3481 12.7548 0 0 c 0 0 0 0 0 0 30.0549 70.9806 83.8812 23.8364 93.3343 3.89076 96.2009 95.7826 81.092 45.3752 55.8995 0 0 g 0 0 0 0 0 0 35.5782 4.23155 3.17299 2.67418 1.2004 55.5378 0.55313 0.768116 1.5092 2.34931 9.05016 0 0 t 0 0 0 0 0 0 11.9671 7.15283 4.39142 1.80688 3.20576 14.4538 1.17904 0.855072 16.4417 8.92737 22.2955 0 0

M00249_2.00_shift9 (WT1)
; oligos_7nt_mkv5_m4 versus M00249_2.00 (WT1); m=43/165; ncol2=11; w=0; offset=2; strand=D; shift=9; score=0.609951; ---------mCyCCCCCrc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.7654 9.76681 2.48942 0.022935 0.022935 0.022935 9.70563 0.022935 25.8716 15.2561 c 0 0 0 0 0 0 0 0 0 29.4673 70.6996 32.473 99.9312 99.9312 99.9312 90.2485 99.9312 15.4144 54.2316 g 0 0 0 0 0 0 0 0 0 19.8837 9.76681 2.48942 0.022935 0.022935 0.022935 0.022935 0.022935 53.5748 15.2561 t 0 0 0 0 0 0 0 0 0 19.8837 9.76681 62.5481 0.022935 0.022935 0.022935 0.022935 0.022935 5.13927 15.2561

M04462_2.00_shift8 (EGR4)
; oligos_7nt_mkv5_m4 versus M04462_2.00 (EGR4); m=44/165; ncol2=13; w=0; offset=1; strand=D; shift=8; score=0.60977; --------ymCGCCCMCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 18.605 38.9584 0.633624 9.8065 0 0.0572574 0 72.8326 0 16.0613 1.10299 c 0 0 0 0 0 0 0 0 42.2801 56.974 98.2963 0.322504 99.7999 99.9284 95.7088 25.7694 99.9857 1.82149 89.5344 g 0 0 0 0 0 0 0 0 10.169 1.09935 0 83.3851 0.0428878 0 0.205648 1.14763 0.0143225 74.7991 2.70617 t 0 0 0 0 0 0 0 0 28.9459 2.96826 1.07012 6.48591 0.157255 0.0143143 4.08555 0.250391 0 7.31812 6.65641

M02921_2.00_shift6 (SP1)
; oligos_7nt_mkv5_m4 versus M02921_2.00 (SP1); m=45/165; ncol2=11; w=-1; offset=-1; strand=D; shift=6; score=0.607202; ------rCCmCrCCCmc-- ; cor=; Ncor= a 0 0 0 0 0 0 46.3014 19.2941 6.62971 47.0964 0.606612 30.0733 0 0.183038 0.127065 38.9714 17.6778 0 0 c 0 0 0 0 0 0 2.23634 70.7016 75.4216 47.7062 99.0294 0.867355 99.6642 99.6034 82.9733 47.5875 51.7187 0 0 g 0 0 0 0 0 0 43.205 3.37809 1.8711 4.96516 0.181984 48.8261 0.030525 0.0610128 0 1.56416 10.4546 0 0 t 0 0 0 0 0 0 8.25724 6.62625 16.0776 0.232288 0.181984 20.2333 0.30525 0.152532 16.8996 11.877 20.1489 0 0

M08088_2.00_shift5 (KLF9)
; oligos_7nt_mkv5_m4 versus M08088_2.00 (KLF9); m=46/165; ncol2=13; w=-2; offset=-2; strand=D; shift=5; score=0.607151; -----rscCACACCCacy- ; cor=; Ncor= a 0 0 0 0 0 30.6917 16.545 21.5676 0.417101 93.7261 0.417101 80.1877 0.712548 7.99444 0.955857 61.2096 8.20299 21.0115 0 c 0 0 0 0 0 20.3163 25.1825 67.5356 98.349 4.25791 97.7233 2.05075 96.1244 88.7904 96.0028 23.8443 57.1081 38.2343 0 g 0 0 0 0 0 32.8815 49.4786 6.15224 0.677789 1.2513 1.37296 15.7108 2.15502 1.68578 0.921098 5.82204 17.1011 15.0156 0 t 0 0 0 0 0 16.1105 8.79388 4.74453 0.556135 0.764685 0.486618 2.05075 1.00799 1.52937 2.12026 9.12409 17.5878 25.7386 0

M08964_2.00_shift6 (M08964_2.00)
; oligos_7nt_mkv5_m4 versus M08964_2.00; m=47/165; ncol2=15; w=-1; offset=-1; strand=D; shift=6; score=0.606831; ------GCCmCaCCCwyyy ; cor=; Ncor= a 0 0 0 0 0 0 9.8 17.4 10.2 53.8 1.6 63.6 1.4 8 0.4 48.2 3.8 12.6 8.8 c 0 0 0 0 0 0 7 72.2 81.6 43.4 87.8 1.6 88.4 89.2 88.6 15.8 47 29.2 42 g 0 0 0 0 0 0 68.2 4 0.8 0.6 1 23.2 4.4 0 0.4 1.8 23.6 12 20.6 t 0 0 0 0 0 0 15 6.4 7.4 2.2 9.6 11.6 5.8 2.8 10.6 34.2 25.6 46.2 28.6

M06169_2.00_shift6 (M06169_2.00)
; oligos_7nt_mkv5_m4 versus M06169_2.00; m=48/165; ncol2=12; w=-1; offset=-1; strand=D; shift=6; score=0.606414; ------rCCACrCCCwhy- ; cor=; Ncor= a 0 0 0 0 0 0 45.8333 12.5 8.33333 83.3333 4.16667 41.6667 4.16667 0 0 58.3333 29.1667 4.34783 0 c 0 0 0 0 0 0 0 83.3333 87.5 16.6667 95.8333 0 91.6667 91.6667 91.6667 8.33333 29.1667 43.4783 0 g 0 0 0 0 0 0 54.1667 4.16667 0 0 0 58.3333 0 8.33333 0 8.33333 12.5 8.69565 0 t 0 0 0 0 0 0 0 0 4.16667 0 0 0 4.16667 0 8.33333 25 29.1667 43.4783 0

M04509_2.00_shift6 (ZNF281)
; oligos_7nt_mkv5_m4 versus M04509_2.00 (ZNF281); m=49/165; ncol2=12; w=-1; offset=-1; strand=D; shift=6; score=0.605551; ------gCCCCTCCCCCa- ; cor=; Ncor= a 0 0 0 0 0 0 11.2647 2.15385 4.33229 0.138504 6.92892 2.06233 0 1.67286 3.41696 3.75881 5.06993 67.5349 0 c 0 0 0 0 0 0 14.7892 92.2198 93.9705 98.2918 91.0148 0 99.8126 98.3271 91.263 81.9107 92.5699 23.0233 0 g 0 0 0 0 0 0 61.2647 0.835165 1.25056 0 0.49173 0 0.0937207 0 1.25433 5.91229 0 1.67442 0 t 0 0 0 0 0 0 12.6814 4.79121 0.446628 1.56971 1.5646 97.9377 0.0937207 0 4.06574 8.41817 2.36014 7.76744 0

M04584_2.00_shift8 (EGR3)
; oligos_7nt_mkv5_m4 versus M04584_2.00 (EGR3); m=50/165; ncol2=13; w=0; offset=1; strand=D; shift=8; score=0.604192; --------hmCGCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 29.6397 41.0368 0 1.7082 0.269654 0.041632 0.100806 97.2458 0.207727 18.6845 0.38088 c 0 0 0 0 0 0 0 0 30.5978 58.1371 99.6472 0.542605 99.6059 99.9584 96.8145 2.7339 99.7507 0.832974 91.4492 g 0 0 0 0 0 0 0 0 13.5597 0.0413052 0.124507 96.5032 0.0829703 0 0.120968 0.0202511 0.0415455 68.9645 3.10417 t 0 0 0 0 0 0 0 0 26.2029 0.7848 0.228263 1.24598 0.0414852 0 2.96371 0 0 11.518 5.0657

M06117_2.00_shift6 (SP6)
; oligos_7nt_mkv5_m4 versus M06117_2.00 (SP6); m=51/165; ncol2=11; w=-1; offset=-1; strand=D; shift=6; score=0.603663; ------gmymCGCCCmc-- ; cor=; Ncor= a 0 0 0 0 0 0 18.1818 27.2727 0 54.5455 0 4.54545 4.54545 0 0 54.5455 4.54545 0 0 c 0 0 0 0 0 0 4.54545 45.4545 59.0909 45.4545 100 0 95.4545 100 86.3636 31.8182 63.6364 0 0 g 0 0 0 0 0 0 59.0909 9.09091 0 0 0 86.3636 0 0 0 0 13.6364 0 0 t 0 0 0 0 0 0 18.1818 18.1818 40.9091 0 0 9.09091 0 0 13.6364 13.6364 18.1818 0 0

M04537_2.00_shift5 (KLF13)
; oligos_7nt_mkv5_m4 versus M04537_2.00 (KLF13); m=52/165; ncol2=13; w=-2; offset=-2; strand=D; shift=5; score=0.603059; -----crCCACRCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 23.8837 39.5377 16.4845 4.1606 76.1744 0.202505 25.201 0.217115 0.321351 0.192691 39.3057 7.57222 19.0559 0 c 0 0 0 0 0 31.1724 11.4831 71.5224 92.0949 21.3192 99.61 0.889699 99.431 99.2527 91.3977 51.1096 70.0514 40.3629 0 g 0 0 0 0 0 24.2527 43.8909 6.20389 0.811317 1.99025 0 71.1813 0.164708 0.246618 0.144519 0.680735 3.81613 13.0402 0 t 0 0 0 0 0 20.6912 5.08826 5.78922 2.93322 0.516203 0.187505 2.72805 0.187168 0.179359 8.26509 8.90402 18.5603 27.541 0

M03705_2.00_shift6 (M03705_2.00)
; oligos_7nt_mkv5_m4 versus M03705_2.00; m=53/165; ncol2=11; w=-1; offset=-1; strand=D; shift=6; score=0.600451; ------rmCACrCCCmc-- ; cor=; Ncor= a 0 0 0 0 0 0 30.7967 30.3548 0 88.1119 3.4188 40.0564 6.49926 6.6482 0 40.2102 9.44386 0 0 c 0 0 0 0 0 0 10.9394 52.2996 90.7781 5.17483 89.7436 1.97461 93.0576 87.2576 80.3571 42.5756 66.107 0 0 g 0 0 0 0 0 0 44.1141 1.97109 4.89914 6.71329 0 48.6601 0 1.52355 3.06122 1.44547 0.629591 0 0 t 0 0 0 0 0 0 14.1498 15.3745 4.32277 0 6.83761 9.30889 0.443131 4.57064 16.5816 15.7687 23.8195 0 0

M04657_2.00_shift5 (KLF14)
; oligos_7nt_mkv5_m4 versus M04657_2.00 (KLF14); m=54/165; ncol2=13; w=-2; offset=-2; strand=D; shift=5; score=0.600303; -----srcCaCGCCCmcy- ; cor=; Ncor= a 0 0 0 0 0 24.251 42.2284 16.4532 5.29267 65.2909 2.21104 18.4092 0.217797 0.265128 0.689655 35.1905 10.5908 19.8902 0 c 0 0 0 0 0 26.5725 11.9261 63.3006 87.1854 18.7423 97.2095 2.73727 99.1755 99.423 86.2069 52.5107 61.7582 39.8745 0 g 0 0 0 0 0 28.5961 38.409 8.59895 1.31291 11.4093 0.21348 71.5167 0.0777847 0.311915 0.351589 1.89847 6.2606 13.3804 0 t 0 0 0 0 0 20.5804 7.43645 11.6473 6.20897 4.55756 0.365965 7.33677 0.528936 0 12.7519 10.4003 21.3904 26.8549 0

M08302_2.00_shift10 (EGR2)
; oligos_7nt_mkv5_m4 versus M08302_2.00 (EGR2); m=55/165; ncol2=9; w=0; offset=3; strand=D; shift=10; score=0.600134; ----------CgCCCmCdC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0739645 23.1509 0.0739645 0.0739645 0.0739645 37.9438 0.0739645 28.4763 0.0739645 c 0 0 0 0 0 0 0 0 0 0 99.7781 0.0739645 99.7781 99.7781 84.0976 61.9083 99.7781 0.0739645 89.1272 g 0 0 0 0 0 0 0 0 0 0 0.0739645 55.6953 0.0739645 0.0739645 0.0739645 0.0739645 0.0739645 45.932 10.7249 t 0 0 0 0 0 0 0 0 0 0 0.0739645 21.0799 0.0739645 0.0739645 15.7544 0.0739645 0.0739645 25.5178 0.0739645

M06171_2.00_shift6 (M06171_2.00)
; oligos_7nt_mkv5_m4 versus M06171_2.00; m=56/165; ncol2=11; w=-1; offset=-1; strand=D; shift=6; score=0.599928; ------RCCACACCCac-- ; cor=; Ncor= a 0 0 0 0 0 0 25 20 0 80 0 85 0 0 0 65 20 0 0 c 0 0 0 0 0 0 0 70 100 10 100 0 100 100 100 15 55 0 0 g 0 0 0 0 0 0 75 10 0 10 0 10 0 0 0 0 5 0 0 t 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 20 20 0 0

M04540_2.00_shift5 (KLF13)
; oligos_7nt_mkv5_m4 versus M04540_2.00 (KLF13); m=57/165; ncol2=13; w=-2; offset=-2; strand=D; shift=5; score=0.597832; -----crCCACrCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 20.513 34.9546 17.3045 1.51246 75.5084 0 30.9757 0.0176134 0.364275 0.154971 35.7388 6.61041 18.839 0 c 0 0 0 0 0 34.234 4.11928 76.293 95.8513 18.075 99.9119 0 99.9031 99.5743 90.1534 55.83 73.1145 43.0158 0 g 0 0 0 0 0 22.3246 57.854 2.4346 1.62653 5.56794 0 65.2592 0.00440335 0.0351108 0.107288 0.799128 2.66336 10.2878 0 t 0 0 0 0 0 22.9284 3.07208 3.96799 1.00972 0.84867 0.0880747 3.76517 0.0748569 0.0263331 9.58436 7.63208 17.6118 27.8574 0

M04558_2.00_shift5 (SP3,SP6)
; oligos_7nt_mkv5_m4 versus M04558_2.00 (SP3,SP6); m=58/165; ncol2=13; w=-2; offset=-2; strand=D; shift=5; score=0.597135; -----srCCACGCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 19.2232 28.4502 8.48454 2.28343 79.5427 0.0907853 6.15079 0 0 0.0273486 47.7649 7.4691 23.0011 0 c 0 0 0 0 0 28.5844 7.03964 84.2193 94.0631 20.2604 99.7276 0 100 99.8636 90.1272 44.005 68.7265 39.5691 0 g 0 0 0 0 0 28.7513 58.9288 2.88781 0.770658 0.0302847 0 87.1825 0 0 0.0273486 0.5431 3.98979 7.95024 0 t 0 0 0 0 0 23.4411 5.58133 4.40838 2.88283 0.166566 0.181571 6.66667 0 0.136364 9.81813 7.68695 19.8146 29.4796 0

M08880_2.00_shift5 (KLF9)
; oligos_7nt_mkv5_m4 versus M08880_2.00 (KLF9); m=59/165; ncol2=15; w=-2; offset=-2; strand=D; shift=5; score=0.596229; -----gGcCMCGCCCmCyy ; cor=; Ncor= a 0 0 0 0 0 14.4531 10.9375 16.0156 1.5625 71.875 0 23.0469 0 1.5625 0 32.0312 2.73438 9.76562 9.375 c 0 0 0 0 0 20.3125 3.125 67.1875 97.6562 26.1719 100 0.390625 99.2188 98.0469 98.4375 63.2812 80.0781 26.5625 46.0938 g 0 0 0 0 0 52.3438 84.375 11.7188 0.390625 1.5625 0 75.7812 0.78125 0.390625 0 0.390625 1.17188 13.6719 18.75 t 0 0 0 0 0 12.8906 1.5625 5.07812 0.390625 0.390625 0 0.78125 0 0 1.5625 4.29688 16.0156 50 25.7812

M04539_2.00_shift5 (KLF13)
; oligos_7nt_mkv5_m4 versus M04539_2.00 (KLF13); m=60/165; ncol2=13; w=-2; offset=-2; strand=D; shift=5; score=0.596075; -----crCCACRCCCmcy- ; cor=; Ncor= a 0 0 0 0 0 24.9894 44.4014 16.781 3.06778 77.518 0 26.2894 0 0.0653218 0.0643522 40.4336 10.1436 21.3777 0 c 0 0 0 0 0 30.6089 5.35247 71.8852 95.402 20.7138 99.8425 0.0713267 99.9423 99.8963 88.0542 48.9039 64.5221 37.6938 0 g 0 0 0 0 0 24.2355 46.3741 5.50241 0.245863 1.4163 0 71.3212 0 0.0384246 0.0779001 0.436396 4.42612 15.4967 0 t 0 0 0 0 0 20.1662 3.87207 5.83144 1.28436 0.35184 0.157456 2.31812 0.0576635 0 11.8036 10.2261 20.9082 25.4317 0

M02888_2.00_shift6 (KLF16)
; oligos_7nt_mkv5_m4 versus M02888_2.00 (KLF16); m=61/165; ncol2=11; w=-1; offset=-1; strand=D; shift=6; score=0.595714; ------gmCMCgCCCMC-- ; cor=; Ncor= a 0 0 0 0 0 0 21.8146 33.2964 3.5942 69.9939 3.85064 18.5102 0.493827 0.123305 0.925926 26.152 1.57094 0 0 c 0 0 0 0 0 0 17.5237 59.5713 93.4493 28.0584 94.049 6.4432 99.5062 99.3835 93.287 70.3172 79.136 0 0 g 0 0 0 0 0 0 52.8005 2.84553 0.347826 1.94766 0.991832 60.0372 0 0.493218 0.173611 1.13704 1.12911 0 0 t 0 0 0 0 0 0 7.86112 4.28677 2.6087 0 1.10852 15.0093 0 0 5.61343 2.39378 18.164 0 0

M10813_2.00_shift8 (PAX4)
; oligos_7nt_mkv5_m4 versus M10813_2.00 (PAX4); m=62/165; ncol2=12; w=0; offset=1; strand=D; shift=8; score=0.59403; --------aaycyyCACCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 35.2941 47.0588 17.6471 23.5294 23.5294 11.7647 5.88235 94.1176 5.88235 17.6471 5.88235 c 0 0 0 0 0 0 0 0 23.5294 11.7647 29.4118 35.2941 41.1765 52.9412 88.2353 0 82.3529 70.5882 70.5882 g 0 0 0 0 0 0 0 0 23.5294 17.6471 17.6471 17.6471 5.88235 0 5.88235 0 11.7647 0 17.6471 t 0 0 0 0 0 0 0 0 17.6471 23.5294 35.2941 23.5294 29.4118 35.2941 0 5.88235 0 11.7647 5.88235

M04538_2.00_shift5 (KLF13)
; oligos_7nt_mkv5_m4 versus M04538_2.00 (KLF13); m=63/165; ncol2=13; w=-2; offset=-2; strand=D; shift=5; score=0.592512; -----crCCACRCCCmCy- ; cor=; Ncor= a 0 0 0 0 0 19.2843 33.2076 18.5758 1.25656 80.2155 0 28.5787 0 0.126017 0.0174972 33.8885 5.28546 18.457 0 c 0 0 0 0 0 37.2752 4.84968 74.7925 96.574 13.6604 100 0 100 99.7862 91.4439 59.5032 76.796 44.2501 0 g 0 0 0 0 0 21.3509 58.8905 2.47009 1.45613 5.61149 0 69.5658 0 0.0305495 0.139978 0.45747 1.64547 9.06969 0 t 0 0 0 0 0 22.0896 3.0522 4.16166 0.713283 0.512647 0 1.85555 0 0.0572803 8.39866 6.15082 16.2731 28.2232 0

M02915_2.00_shift7 (EGR3)
; oligos_7nt_mkv5_m4 versus M02915_2.00 (EGR3); m=64/165; ncol2=15; w=0; offset=0; strand=D; shift=7; score=0.591075; -------yhmCGCCCMCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 19.4798 26.747 58.5131 0.106952 2.87958 0 0 0 71.1479 0 1.73719 0.104004 c 0 0 0 0 0 0 0 37.2832 29.2169 39.7843 99.1979 1.39616 99.8924 99.4647 95.445 27.9312 99.5223 1.24722 98.752 g 0 0 0 0 0 0 0 16.0694 11.506 0.567537 0 94.1536 0.107643 0 0.366492 0.675261 0.37155 95.8575 0.0520021 t 0 0 0 0 0 0 0 27.1676 32.5301 1.13507 0.695187 1.57068 0 0.535332 4.18848 0.245549 0.106157 1.15813 1.09204

M09506_2.00_shift10 (EGR1)
; oligos_7nt_mkv5_m4 versus M09506_2.00 (EGR1); m=65/165; ncol2=10; w=0; offset=3; strand=D; shift=10; score=0.589763; ----------CrCCCMCrC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 2.4 42.2 0.1 2.4 0.1 71.6 0.1 30 0.4 c 0 0 0 0 0 0 0 0 0 0 94 1 99.7 97.3 97.1 28.2 99.7 2.3 88.2 g 0 0 0 0 0 0 0 0 0 0 0.2 41.5 0.1 0.2 0.1 0.1 0.1 52.3 3.6 t 0 0 0 0 0 0 0 0 0 0 3.4 15.3 0.1 0.1 2.7 0.1 0.1 15.4 7.8

M04583_2.00_shift8 (EGR3)
; oligos_7nt_mkv5_m4 versus M04583_2.00 (EGR3); m=66/165; ncol2=13; w=0; offset=1; strand=D; shift=8; score=0.587621; --------mmCGCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.6547 52.8347 0.0796766 5.49078 0.0943341 0.170885 0.075841 92.8765 0.208989 4.05723 0.12021 c 0 0 0 0 0 0 0 0 37.4878 45.5584 99.9203 0.319454 99.8172 99.7614 82.8379 7.107 99.6674 0.331428 96.9118 g 0 0 0 0 0 0 0 0 11.9702 0.168541 0 92.4505 0.0619067 0.0530332 0.0171254 0 0.0677008 93.5178 0 t 0 0 0 0 0 0 0 0 23.8873 1.43841 0 1.73925 0.0265315 0.0147314 17.0691 0.0164577 0.0559268 2.09352 2.96803

M04461_2.00_shift8 (EGR4)
; oligos_7nt_mkv5_m4 versus M04461_2.00 (EGR4); m=67/165; ncol2=13; w=0; offset=1; strand=D; shift=8; score=0.587579; --------cmCGCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.0333 44.0628 0.720243 5.48356 0 0 0.120126 83.4085 0.154172 3.15973 0.132363 c 0 0 0 0 0 0 0 0 45.2245 51.0423 98.1425 0.343824 99.9614 99.8169 95.694 16.2371 99.788 0.597042 97.9106 g 0 0 0 0 0 0 0 0 8.91357 1.65304 0.15163 91.2986 0 0.115663 0.0646831 0.209407 0.0192715 95.1226 0.264725 t 0 0 0 0 0 0 0 0 24.8286 3.2418 0.985595 2.87402 0.03861 0.0674699 4.12123 0.144974 0.0385431 1.1206 1.69235

M09038_2.00_rc_shift9 (M09038_2.00_rc)
; oligos_7nt_mkv5_m4 versus M09038_2.00_rc; m=68/165; ncol2=10; w=0; offset=2; strand=R; shift=9; score=0.587431; ---------syTCCCGCsc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 5.62249 0.200803 0.401606 0.200803 0.803213 0.401606 0.803213 1.60643 0.200803 13.0522 c 0 0 0 0 0 0 0 0 0 47.1888 47.1888 0.803213 92.1687 96.1847 94.5783 0 95.3815 61.8474 57.0281 g 0 0 0 0 0 0 0 0 0 26.3052 8.43373 0.401606 1.00402 2.61044 3.01205 91.7671 2.40964 25.7028 11.245 t 0 0 0 0 0 0 0 0 0 20.8835 44.1767 98.3936 6.62651 0.401606 2.00803 7.42972 0.60241 12.249 18.6747

M02892_2.00_shift7 (ZNF740)
; oligos_7nt_mkv5_m4 versus M02892_2.00 (ZNF740); m=69/165; ncol2=10; w=0; offset=0; strand=D; shift=7; score=0.585207; -------cCCCCCCCAc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 19.8051 2.29439 1.13194 1.38249 5.04422 0.612944 0.899119 1.61807 72.652 7.5187 0 0 c 0 0 0 0 0 0 0 57.0798 95.976 96.1797 96.3843 89.0599 98.035 97.7882 91.6568 7.02739 67.8055 0 0 g 0 0 0 0 0 0 0 16.0537 0.352983 1.04351 1.08118 2.86603 0.757166 0.143859 1.1967 7.08083 3.35411 0 0 t 0 0 0 0 0 0 0 7.06142 1.37663 1.64485 1.15207 3.02981 0.594916 1.16885 5.5284 13.2398 21.3217 0 0

M00617_2.00_shift7 (M00617_2.00)
; oligos_7nt_mkv5_m4 versus M00617_2.00; m=70/165; ncol2=9; w=0; offset=0; strand=D; shift=7; score=0.584827; -------ccmCGCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 0 23.489 19.4417 52.2892 0.827505 19.3067 3.00723e-10 0.283087 0.101233 35.4676 0 0 0 c 0 0 0 0 0 0 0 38.3414 47.819 36.118 98.5594 3.09116e-07 99.9999 99.2854 80.6139 23.3039 0 0 0 g 0 0 0 0 0 0 0 14.6807 9.46331 5.97026 6.91425e-05 72.9993 3.40174e-19 0.430847 0.375188 8.48772 0 0 0 t 0 0 0 0 0 0 0 23.489 23.276 5.62258 0.61303 7.69407 0 0 18.9096 32.7408 0 0 0

M02889_2.00_shift7 (EGR4)
; oligos_7nt_mkv5_m4 versus M02889_2.00 (EGR4); m=71/165; ncol2=16; w=0; offset=0; strand=D; shift=7; score=0.584459; -------yymCGCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 20.9027 20.9149 55.1426 2.00556 6.32465 0.238663 2.52578 0 71.8162 0.915713 2.54896 0.20982 c 0 0 0 0 0 0 0 26.1329 30.4483 38.6501 88.6815 5.40325 96.4851 93.6224 94.8105 16.8369 91.6129 19.6149 91.3554 g 0 0 0 0 0 0 0 17.9832 9.64318 3.03335 2.97855 80.2298 1.36689 2.25216 2.36865 5.55378 2.37253 75.0684 3.8397 t 0 0 0 0 0 0 0 34.9812 38.9936 3.17397 6.33439 8.04232 1.90931 1.59966 2.82084 5.79317 5.09886 2.76775 4.59505

M02885_2.00_shift9 (EGR2)
; oligos_7nt_mkv5_m4 versus M02885_2.00 (EGR2); m=72/165; ncol2=11; w=0; offset=2; strand=D; shift=9; score=0.583932; ---------mCGCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 55.8398 0 6.94444 0.370828 1.4944 0 93.9606 0 2.45883 0.232019 c 0 0 0 0 0 0 0 0 0 32.7703 93.8862 0 96.2917 96.7621 82.3331 4.814 98.4355 0 91.9374 g 0 0 0 0 0 0 0 0 0 4.53668 1.69492 87.8296 1.54512 0.933998 2.13124 1.13786 0.125156 93.5746 1.16009 t 0 0 0 0 0 0 0 0 0 6.85328 4.41889 5.22599 1.79234 0.809465 15.5356 0.0875274 1.4393 3.9666 6.67053

M02935_2.00_shift7 (M02935_2.00)
; oligos_7nt_mkv5_m4 versus M02935_2.00; m=73/165; ncol2=10; w=0; offset=0; strand=D; shift=7; score=0.583423; -------mCCCCCCCac-- ; cor=; Ncor= a 0 0 0 0 0 0 0 30.3121 18.5904 16.9679 4.701 3.83543 6.26236 7.45322 11.3504 67.0956 16.2721 0 0 c 0 0 0 0 0 0 0 34.1858 70.7181 77.5219 91.9115 92.7127 87.6401 84.3324 77.3865 10.4971 53.3507 0 0 g 0 0 0 0 0 0 0 22.1888 2.79255 0.670554 0.829589 0.27894 1.35135 3.8059 3.11409 6.98965 7.0626 0 0 t 0 0 0 0 0 0 0 13.3133 7.89894 4.83965 2.5579 3.17294 4.74621 4.4085 8.14901 15.4176 23.3146 0 0

M08349_2.00_shift10 (EGR3)
; oligos_7nt_mkv5_m4 versus M08349_2.00 (EGR3); m=74/165; ncol2=9; w=0; offset=3; strand=D; shift=10; score=0.574346; ----------CkCCYCCdC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0647668 21.8264 0.0647668 0.0647668 0.0647668 18.1995 0.0647668 29.5984 0.0647668 c 0 0 0 0 0 0 0 0 0 0 99.8057 0.0647668 99.8057 99.8057 73.6399 81.671 99.8057 0.0647668 75.7124 g 0 0 0 0 0 0 0 0 0 0 0.0647668 49.0285 0.0647668 0.0647668 0.0647668 0.0647668 0.0647668 40.2202 24.158 t 0 0 0 0 0 0 0 0 0 0 0.0647668 29.0803 0.0647668 0.0647668 26.2306 0.0647668 0.0647668 30.1166 0.0647668

M05859_2.00_shift5 (M05859_2.00)
; oligos_7nt_mkv5_m4 versus M05859_2.00; m=75/165; ncol2=13; w=-2; offset=-2; strand=D; shift=5; score=0.571682; -----rGccmCGCCCmyw- ; cor=; Ncor= a 0 0 0 0 0 33 17.4 21.7 14.9 52.9 0.2 5.5 0.1 0.1 0.1 43.2 12.8 29.7 0 c 0 0 0 0 0 9.2 1.9 44.6 64.8 46.8 99.3 0.3 99.6 99.6 80.6 38.7 41.1 15.7 0 g 0 0 0 0 0 35.6 71.1 14.9 2.1 0.2 0.2 87.3 0.1 0.1 0.1 0.7 13.2 18.1 0 t 0 0 0 0 0 22.2 9.5 18.8 18.2 0.1 0.3 6.9 0.1 0.1 19.2 17.4 32.9 36.5 0

M00739_2.00_shift8 (RBPJ)
; oligos_7nt_mkv5_m4 versus M00739_2.00 (RBPJ); m=76/165; ncol2=9; w=0; offset=1; strand=D; shift=8; score=0.569809; --------dktTCcCAy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.4047 22.6738 11.6858 6.3669 2.37326 17.6512 0.642074 77.5488 13.8208 0 0 c 0 0 0 0 0 0 0 0 20.7996 14.6027 19.2666 4.57732 91.3104 54.0983 96.2499 3.93892 39.495 0 0 g 0 0 0 0 0 0 0 0 28.6437 36.6425 13.9904 1.60178 1.34214 6.69127 1.25476 10.8147 20.2099 0 0 t 0 0 0 0 0 0 0 0 25.1519 26.081 55.0572 87.454 4.9742 21.5592 1.85326 7.69759 26.4743 0 0

M00233_2.00_shift10 (EGR2)
; oligos_7nt_mkv5_m4 versus M00233_2.00 (EGR2); m=77/165; ncol2=10; w=0; offset=3; strand=D; shift=10; score=0.568839; ----------crCCCmCgy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 17.7414 25.6279 11.1401 0.99736 5.34589 49.217 2.94523 21.4637 12.4753 c 0 0 0 0 0 0 0 0 0 0 50.1942 8.11473 80.6845 95.3311 71.9757 40.2955 90.034 11.205 47.1698 g 0 0 0 0 0 0 0 0 0 0 11.6569 43.9776 2.18267 2.99623 2.26218 5.4534 1.9159 49.2231 14.2073 t 0 0 0 0 0 0 0 0 0 0 20.4075 22.2798 5.99273 0.675269 20.4162 5.03412 5.10483 18.1082 26.1475

M08965_2.00_shift6 (M08965_2.00)
; oligos_7nt_mkv5_m4 versus M08965_2.00; m=78/165; ncol2=15; w=-1; offset=-1; strand=D; shift=6; score=0.567439; ------gCCmCdCCCwscc ; cor=; Ncor= a 0 0 0 0 0 0 12.4248 5.01002 0.801603 27.4549 1.2024 42.6854 0.400802 0.200401 0.801603 34.4689 8.81764 11.6232 10.2204 c 0 0 0 0 0 0 7.81563 85.3707 94.3888 60.9218 94.3888 0.200401 97.7956 99.1984 94.7896 17.0341 29.0581 54.3086 55.1102 g 0 0 0 0 0 0 59.519 3.80762 0.601202 3.00601 1.002 30.8617 0.801603 0.200401 0 2.20441 46.2926 17.8357 14.8297 t 0 0 0 0 0 0 20.2405 5.81162 4.20842 8.61723 3.40681 26.2525 1.002 0.400802 4.40882 46.2926 15.8317 16.2325 19.8397

M08317_2.00_shift6 (KLF10)
; oligos_7nt_mkv5_m4 versus M08317_2.00 (KLF10); m=79/165; ncol2=15; w=-1; offset=-1; strand=D; shift=6; score=0.567349; ------gcCmCRCCCCCys ; cor=; Ncor= a 0 0 0 0 0 0 5.6645 19.1721 3.9216 45.098 0 29.1939 0 0.2179 0.2179 19.1721 4.5752 16.5577 11.5468 c 0 0 0 0 0 0 17.8649 64.2702 87.3638 47.4946 94.5534 0 100 99.7821 89.3246 69.0632 69.281 28.976 38.9978 g 0 0 0 0 0 0 66.2309 6.5359 1.3072 7.4074 4.5752 68.8453 0 0 0 0.6536 4.793 23.3115 27.6688 t 0 0 0 0 0 0 10.2397 10.0218 7.4074 0 0.8715 1.9608 0 0 10.4575 11.1111 21.3508 31.1547 21.7865

M02932_2.00_shift7 (M02932_2.00)
; oligos_7nt_mkv5_m4 versus M02932_2.00; m=80/165; ncol2=16; w=0; offset=0; strand=D; shift=7; score=0.566421; -------mhmCGCCCmCkC ; cor=; Ncor= a 0 0 0 0 0 0 0 32.3142 32.2785 61.8182 0 7.54445 0 0.157812 0 51.7114 0.314961 0.422833 0.157978 c 0 0 0 0 0 0 0 32.4196 30.9072 36.6753 99.6845 0.432484 99.9473 99.737 100 48.1306 99.5276 16.7321 99.842 g 0 0 0 0 0 0 0 11.3337 3.69198 0.363636 0.0525762 91.11 0.0527148 0.105208 0 0.157978 0 25.5814 0 t 0 0 0 0 0 0 0 23.9325 33.1224 1.14286 0.262881 0.913023 0 0 0 0 0.15748 57.2637 0

M09020_2.00_shift9 (RBPJ)
; oligos_7nt_mkv5_m4 versus M09020_2.00 (RBPJ); m=81/165; ncol2=11; w=0; offset=2; strand=D; shift=9; score=0.566319; ---------kTTCCCAsgs ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 4.6 1.2 0.2 0.2 5.2 2 72.2 2 25 18.6 c 0 0 0 0 0 0 0 0 0 22.2 21.2 0.8 94 73 95.8 2.6 60.2 21.2 48 g 0 0 0 0 0 0 0 0 0 31.6 1.8 0.6 0.4 0.8 0.2 9 31.4 48.6 29.6 t 0 0 0 0 0 0 0 0 0 41.6 75.8 98.4 5.4 21 2 16.2 6.4 5.2 3.8

M04564_2.00_shift7 (GLIS1)
; oligos_7nt_mkv5_m4 versus M04564_2.00 (GLIS1); m=82/165; ncol2=15; w=0; offset=0; strand=D; shift=7; score=0.564984; -------baCCCCCCACga ; cor=; Ncor= a 0 0 0 0 0 0 0 8.64726 64.9057 1.57025 0.929054 12.754 0.0845309 15.7698 0.417711 72.7513 1.62338 23.3573 49.3628 c 0 0 0 0 0 0 0 33.6473 22.327 96.0331 98.7331 74.1416 98.9011 83.8565 96.7419 2.51323 93.75 15.7372 8.71898 g 0 0 0 0 0 0 0 27.7397 11.8868 0 0.337838 0.280308 0.507185 0.373692 0.417711 23.4788 3.00325 52.0707 17.505 t 0 0 0 0 0 0 0 29.9658 0.880503 2.39669 0 12.8241 0.507185 0 2.42272 1.25661 1.62338 8.8349 24.4131

M00742_2.00_shift8 (RBPJ)
; oligos_7nt_mkv5_m4 versus M00742_2.00 (RBPJ); m=83/165; ncol2=9; w=0; offset=1; strand=D; shift=8; score=0.564354; --------kktTCcCAc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.6818 23.2579 10.411 3.85203 1.36635 15.4282 0.216107 86.4987 10.8203 0 0 c 0 0 0 0 0 0 0 0 22.333 12.1417 14.9225 3.24982 94.8351 56.0475 98.2993 1.99397 45.6693 0 0 g 0 0 0 0 0 0 0 0 27.5517 36.4757 10.411 0.269442 0.601782 5.50799 0.581593 7.24368 18.9428 0 0 t 0 0 0 0 0 0 0 0 25.4335 28.1247 64.2555 92.6287 3.19677 23.0162 0.903044 4.26367 24.5675 0 0

M00778_2.00_shift10 (M00778_2.00)
; oligos_7nt_mkv5_m4 versus M00778_2.00; m=84/165; ncol2=10; w=0; offset=3; strand=D; shift=10; score=0.563026; ----------cgCCCMCGc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 10.1428 18.7938 2.98506 0.0789937 0.779978 73.0394 0.052912 12.7618 6.82934 c 0 0 0 0 0 0 0 0 0 0 65.8094 3.20121 95.93 99.6449 91.9744 25.3049 99.5715 4.33385 62.2543 g 0 0 0 0 0 0 0 0 0 0 5.56648 63.6582 0.255028 0.23731 0.206286 0.836105 0.0424629 74.1771 8.0143 t 0 0 0 0 0 0 0 0 0 0 18.4814 14.3468 0.829957 0.0388368 7.03931 0.819549 0.333163 8.72729 22.9021

M08301_2.00_shift10 (GTF3A)
; oligos_7nt_mkv5_m4 versus M08301_2.00 (GTF3A); m=85/165; ncol2=9; w=0; offset=3; strand=D; shift=10; score=0.55668; ----------CTCCCATCC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 1.8 2.6 0.2 0.2 1 85.8 0.2 0.2 0.2 c 0 0 0 0 0 0 0 0 0 0 89 0.2 93.8 96.2 97.8 1.8 1 96.2 95.4 g 0 0 0 0 0 0 0 0 0 0 5 0.2 4.2 0.2 0.2 0.2 0.2 0.2 0.2 t 0 0 0 0 0 0 0 0 0 0 4.2 97 1.8 3.4 1 12.2 98.6 3.4 4.2

M08882_2.00_shift6 (EGR1)
; oligos_7nt_mkv5_m4 versus M08882_2.00 (EGR1); m=86/165; ncol2=17; w=-1; offset=-1; strand=D; shift=6; score=0.555745; ------yyyCCrCCCmCgC ; cor=; Ncor= a 0 0 0 0 0 0 11.8 15 12.8 17.2 6 30 1.4 2.2 1.4 55.4 4 21.2 5 c 0 0 0 0 0 0 43.6 45.6 40.6 69.6 84.2 0.4 93 95.8 89.2 41 87 4.6 80.8 g 0 0 0 0 0 0 18.2 8.2 12.8 2.2 1 47.6 3.2 0.4 0.2 0.4 3.4 50.6 3 t 0 0 0 0 0 0 26.4 31.2 33.8 11 8.8 22 2.4 1.6 9.2 3.2 5.6 23.6 11.2

M00787_2.00_shift6 (M00787_2.00)
; oligos_7nt_mkv5_m4 versus M00787_2.00; m=87/165; ncol2=10; w=-1; offset=-1; strand=D; shift=6; score=0.553017; ------rccmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 25.986 23.1178 19.3153 50.6834 0.194537 30.2468 0.00336185 0.00625172 2.24714 39.1927 0 0 0 c 0 0 0 0 0 0 15.6045 47.0215 51.4647 34.6604 99.7699 0.00388508 99.9566 99.9931 79.0168 22.3872 0 0 0 g 0 0 0 0 0 0 41.1638 13.0737 10.2872 8.63306 0.00306676 62.1399 0.00261821 0.000459717 0.0148413 12.4098 0 0 0 t 0 0 0 0 0 0 17.2456 16.787 18.9328 6.02308 0.0324799 7.60943 0.0374307 0 18.7213 26.0102 0 0 0

M00622_2.00_shift10 (M00622_2.00)
; oligos_7nt_mkv5_m4 versus M00622_2.00; m=88/165; ncol2=8; w=0; offset=3; strand=D; shift=10; score=0.55298; ----------CgCCCmCg- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 4.20133 13.3489 0.0302663 0.0302663 0.0302663 57.5363 0.0302663 16.6805 0 c 0 0 0 0 0 0 0 0 0 0 91.5557 23.3356 99.9092 99.9092 96.8826 33.3232 99.9092 8.36106 0 g 0 0 0 0 0 0 0 0 0 0 0.0415973 56.6245 0.0302663 0.0302663 0.0302663 9.11017 0.0302663 66.5973 0 t 0 0 0 0 0 0 0 0 0 0 4.20133 6.69108 0.0302663 0.0302663 3.0569 0.0302663 0.0302663 8.36106 0

M02890_2.00_shift7 (EGR4)
; oligos_7nt_mkv5_m4 versus M02890_2.00 (EGR4); m=89/165; ncol2=16; w=0; offset=0; strand=D; shift=7; score=0.55274; -------awMCGCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 38.191 29.2683 72.6804 0 0.364964 0.819672 1.24481 0.421941 86.8852 0.421941 0.735294 0 c 0 0 0 0 0 0 0 20.603 24.3902 25.7732 100 0 97.541 98.7552 98.3122 12.0219 99.1561 0.735294 100 g 0 0 0 0 0 0 0 17.0854 3.90244 0 0 99.2701 0 0 0 1.0929 0.421941 97.4265 0 t 0 0 0 0 0 0 0 24.1206 42.439 1.54639 0 0.364964 1.63934 0 1.26582 0 0 1.10294 0

M08969_2.00_shift9 (M08969_2.00)
; oligos_7nt_mkv5_m4 versus M08969_2.00; m=90/165; ncol2=8; w=0; offset=2; strand=D; shift=9; score=0.552731; ---------yyTCCCAr-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 17.657 11.545 0 0 0 0 85.399 43.3786 0 0 c 0 0 0 0 0 0 0 0 0 36.8421 53.3107 14.9406 98.3022 95.0764 94.3973 0 23.7691 0 0 g 0 0 0 0 0 0 0 0 0 3.90492 3.05603 0 1.69779 3.05603 0 8.82852 28.6078 0 0 t 0 0 0 0 0 0 0 0 0 41.5959 32.0883 85.0594 0 1.86757 5.60272 5.7725 4.24448 0 0

M08939_2.00_shift9 (IKZF1)
; oligos_7nt_mkv5_m4 versus M08939_2.00 (IKZF1); m=91/165; ncol2=8; w=0; offset=2; strand=D; shift=9; score=0.552731; ---------yyTCCCAr-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 17.657 11.545 0 0 0 0 85.399 43.3786 0 0 c 0 0 0 0 0 0 0 0 0 36.8421 53.3107 14.9406 98.3022 95.0764 94.3973 0 23.7691 0 0 g 0 0 0 0 0 0 0 0 0 3.90492 3.05603 0 1.69779 3.05603 0 8.82852 28.6078 0 0 t 0 0 0 0 0 0 0 0 0 41.5959 32.0883 85.0594 0 1.86757 5.60272 5.7725 4.24448 0 0

M00779_2.00_shift6 (M00779_2.00)
; oligos_7nt_mkv5_m4 versus M00779_2.00; m=92/165; ncol2=10; w=-1; offset=-1; strand=D; shift=6; score=0.549143; ------rccmCrCCYh--- ; cor=; Ncor= a 0 0 0 0 0 0 27.1429 23.9158 19.9845 44.052 6.52389 36.7441 3.85933 3.10594 4.58462 32.2624 0 0 0 c 0 0 0 0 0 0 17.8341 41.8687 46.7566 34.3077 84.3918 0.00329278 94.6792 96.8649 70.2954 25.126 0 0 0 g 0 0 0 0 0 0 36.2745 15.4026 12.8707 12.0056 0.00980827 49.5994 0.013043 0.0134782 0.0240579 15.3929 0 0 0 t 0 0 0 0 0 0 18.7485 18.8128 20.3882 9.6347 9.07452 13.6533 1.44845 0.0156594 25.0959 27.2187 0 0 0

M00134_2.00_shift6 (M00134_2.00)
; oligos_7nt_mkv5_m4 versus M00134_2.00; m=93/165; ncol2=10; w=-1; offset=-1; strand=D; shift=6; score=0.548049; ------gccmCgCCCh--- ; cor=; Ncor= a 0 0 0 0 0 0 23.4441 21.9242 17.7318 51.5538 0.989471 22.8736 0.00886864 0.0191497 0.112067 34.2124 0 0 0 c 0 0 0 0 0 0 18.0766 49.7789 53.8047 35.2557 97.4574 1.03044 99.9596 99.9363 82.3801 25.8571 0 0 0 g 0 0 0 0 0 0 41.4554 11.5605 7.65501 8.95871 0.0320459 66.0217 0.0241075 0.0173274 0.0228534 7.71053 0 0 0 t 0 0 0 0 0 0 17.0239 16.7365 20.8085 4.2318 1.52107 10.0743 0 0.0271748 17.485 32.22 0 0 0

M07941_2.00_rc_shift9 (E2F6_rc)
; oligos_7nt_mkv5_m4 versus M07941_2.00_rc (E2F6_rc); m=94/165; ncol2=11; w=0; offset=2; strand=R; shift=9; score=0.543513; ---------yyTCCCGCcc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 8.59379 0 0 0.7812 0 0.3906 7.03121 0 0 19.1406 c 0 0 0 0 0 0 0 0 0 39.8438 35.5469 0 99.2188 100 99.6094 0 100 63.6719 51.5626 g 0 0 0 0 0 0 0 0 0 14.4531 0 0 0 0 0 84.7657 0 22.6562 7.03121 t 0 0 0 0 0 0 0 0 0 37.1094 64.4531 100 0 0 0 8.20311 0 13.6719 22.2656

M10188_2.00_shift9 (EGR1)
; oligos_7nt_mkv5_m4 versus M10188_2.00 (EGR1); m=95/165; ncol2=12; w=0; offset=2; strand=D; shift=9; score=0.543483; ---------mCGCCYACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 57.7 0 10.9 0 0 0 83.6837 0 1.8 0 c 0 0 0 0 0 0 0 0 0 42.3 100 0 100 100 69.1 14.5145 98.2 0 92.7 g 0 0 0 0 0 0 0 0 0 0 0 76.4 0 0 0 1.8018 0 98.2 0 t 0 0 0 0 0 0 0 0 0 0 0 12.7 0 0 30.9 0 1.8 0 7.3

M02883_2.00_shift8 (EGR1)
; oligos_7nt_mkv5_m4 versus M02883_2.00 (EGR1); m=96/165; ncol2=14; w=0; offset=1; strand=D; shift=8; score=0.543371; --------tmCGCCCmCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.9478 51.3906 0.322373 10.5203 0 0.260417 0 65.2638 0.325309 1.90616 1 c 0 0 0 0 0 0 0 0 24.1127 39.5405 96.9697 0.535578 98.0026 99.2839 92.8215 34.3593 99.5446 1.13636 93.8125 g 0 0 0 0 0 0 0 0 15.3967 3.62757 0.773694 85.4246 0.773196 0 0.93633 0 0 93.1818 1.1875 t 0 0 0 0 0 0 0 0 35.5428 5.44135 1.93424 3.51951 1.22423 0.455729 6.2422 0.376884 0.130124 3.77566 4

M02884_2.00_shift8 (EGR1)
; oligos_7nt_mkv5_m4 versus M02884_2.00 (EGR1); m=97/165; ncol2=14; w=0; offset=1; strand=D; shift=8; score=0.541536; --------wACGCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 27.2298 73.7508 0.672372 1.83443 0 0 0 79.544 0 0 0 c 0 0 0 0 0 0 0 0 23.0951 24.9209 98.7775 0 100 99.2159 97.9714 20 99.9394 0 99.2202 g 0 0 0 0 0 0 0 0 11.3999 0.189753 0.183374 98.1656 0 0 0 0.456026 0 99.9073 0 t 0 0 0 0 0 0 0 0 38.2753 1.13852 0.366748 0 0 0.784077 2.02864 0 0.0605694 0.0926784 0.779844

M03704_2.00_shift6 (M03704_2.00)
; oligos_7nt_mkv5_m4 versus M03704_2.00; m=98/165; ncol2=10; w=-1; offset=-1; strand=D; shift=6; score=0.535347; ------rCCACrCCCh--- ; cor=; Ncor= a 0 0 0 0 0 0 37.9958 13.3205 9.30476 70.6121 0 35.0795 0 3.46062 0.998238 39.3436 0 0 0 c 0 0 0 0 0 0 15.2401 75.7239 82.0178 19.982 99.8727 1.39697 99.241 93.6158 92.1315 29.4558 0 0 0 g 0 0 0 0 0 0 43.8935 4.92278 3.816 5.49055 0 60.8847 0 1.43198 0.0587199 5.35937 0 0 0 t 0 0 0 0 0 0 2.87056 6.03282 4.86147 3.91539 0.127307 2.63873 0.759013 1.49165 6.81151 25.8413 0 0 0

M10216_2.00_shift9 (EGR4)
; oligos_7nt_mkv5_m4 versus M10216_2.00 (EGR4); m=99/165; ncol2=12; w=0; offset=2; strand=D; shift=9; score=0.534987; ---------MCrCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 28 0 34 0 0 0 90.7 0 0 0 c 0 0 0 0 0 0 0 0 0 70 100 0 100 100 75.9 9.3 100 0 98.1 g 0 0 0 0 0 0 0 0 0 0 0 56.6 0 0 0 0 0 94.3 0 t 0 0 0 0 0 0 0 0 0 2 0 9.4 0 0 24.1 0 0 5.7 1.9

M04410_2.00_shift6 (KLF5)
; oligos_7nt_mkv5_m4 versus M04410_2.00 (KLF5); m=100/165; ncol2=10; w=-1; offset=-1; strand=D; shift=6; score=0.532117; ------vcCACrCCCh--- ; cor=; Ncor= a 0 0 0 0 0 0 30.3774 20.3306 0 72.2525 1.67921 37.3512 0.641399 4.19825 4.68673 31.3639 0 0 0 c 0 0 0 0 0 0 26.3522 67.2727 88.4872 20.663 92.1251 3.18452 92.7697 92.7697 78.4904 35.5123 0 0 0 g 0 0 0 0 0 0 29.7484 5.06887 0 0 0 47.3512 2.91545 0 1.57869 5.65682 0 0 0 t 0 0 0 0 0 0 13.522 7.32782 11.5128 7.08447 6.19572 12.1131 3.67347 3.03207 15.2442 27.467 0 0 0

M10279_2.00_shift9 (EGR3)
; oligos_7nt_mkv5_m4 versus M10279_2.00 (EGR3); m=101/165; ncol2=12; w=0; offset=2; strand=D; shift=9; score=0.530571; ---------mCGCCyACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 64 0 5.69431 0 0 0 100 0 0 0 c 0 0 0 0 0 0 0 0 0 34 100 0 100 100 67.9 0 100 0 98.1 g 0 0 0 0 0 0 0 0 0 0 0 88.6114 0 0 0 0 0 100 0 t 0 0 0 0 0 0 0 0 0 2 0 5.69431 0 0 32.1 0 0 0 1.9

M10197_2.00_shift9 (EGR2)
; oligos_7nt_mkv5_m4 versus M10197_2.00 (EGR2); m=102/165; ncol2=12; w=0; offset=2; strand=D; shift=9; score=0.530279; ---------mCGCCyACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 49.95 1.2987 12.5 0 0 0 100 0 3.7962 0 c 0 0 0 0 0 0 0 0 0 44.8551 97.4026 0 100 100 62.5 0 100 0 96.2038 g 0 0 0 0 0 0 0 0 0 2.5974 0 82.5 0 0 0 0 0 89.9101 0 t 0 0 0 0 0 0 0 0 0 2.5974 1.2987 5 0 0 37.5 0 0 6.29371 3.7962

M09502_2.00_shift6 (KLF5)
; oligos_7nt_mkv5_m4 versus M09502_2.00 (KLF5); m=103/165; ncol2=10; w=-1; offset=-1; strand=D; shift=6; score=0.529541; ------GCCmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 14.8 18.4 2.2 52.6 1.2 49 0.1 0.1 0.1 35.7 0 0 0 c 0 0 0 0 0 0 1.9 69.4 92.2 40.5 97.2 0.1 99.7 99.7 88.2 22.4 0 0 0 g 0 0 0 0 0 0 75.6 6 0.1 2.3 0.1 42.8 0.1 0.1 0.1 5.5 0 0 0 t 0 0 0 0 0 0 7.7 6.2 5.5 4.6 1.5 8.1 0.1 0.1 11.6 36.4 0 0 0

M00765_2.00_shift8 (M00765_2.00)
; oligos_7nt_mkv5_m4 versus M00765_2.00; m=104/165; ncol2=9; w=0; offset=1; strand=D; shift=8; score=0.527548; --------cmCGCCCMc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 17.435 41.7838 0.00455751 0.00455751 0.00455751 0.00455751 0.00455751 30.5774 7.56959 0 0 c 0 0 0 0 0 0 0 0 47.6951 58.2071 99.9863 8.49137 99.9863 91.4995 99.9863 69.4134 59.8878 0 0 g 0 0 0 0 0 0 0 0 17.435 0.00455751 0.00455751 91.4995 0.00455751 8.49137 0.00455751 0.00455751 7.56959 0 0 t 0 0 0 0 0 0 0 0 17.435 0 0 0 0 0 0 0 24.973 0 0

M01862_2.00_shift8 (M01862_2.00)
; oligos_7nt_mkv5_m4 versus M01862_2.00; m=105/165; ncol2=9; w=0; offset=1; strand=D; shift=8; score=0.526708; --------hmCGCCCmy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.7384 42.0657 0.00439598 0.00439598 0.00439598 0.00439598 0.00439598 40.0281 6.56255 0 0 c 0 0 0 0 0 0 0 0 26.8904 57.9255 99.9868 0.00439598 99.9868 99.9868 99.9868 59.9631 55.5822 0 0 g 0 0 0 0 0 0 0 0 18.4418 0.00439598 0.00439598 99.9868 0.00439598 0.00439598 0.00439598 0.00439598 6.56255 0 0 t 0 0 0 0 0 0 0 0 27.9294 0 0 0 0 0 0 0 31.2927 0 0

M04606_2.00_shift3 (SP1)
; oligos_7nt_mkv5_m4 versus M04606_2.00 (SP1); m=106/165; ncol2=15; w=-4; offset=-4; strand=D; shift=3; score=0.526532; ---twrGCCmCGCCCmCw- ; cor=; Ncor= a 0 0 0 16.9909 56.8037 51.2491 18.8739 5.40541 0.947551 64.5165 0.218648 12.3046 0 0 0 52.4992 4.05832 28.9973 0 c 0 0 0 22.2937 5.17881 2.43829 1.62252 91.9364 84.7191 33.994 99.4534 1.27804 100 100 93.8199 43.1881 71.4114 22.203 0 g 0 0 0 16.7869 2.76005 42.8571 77.9504 1.0395 0.987588 1.06907 0 80.2991 0 0 0.120882 0.563852 2.16444 6.4177 0 t 0 0 0 43.9285 35.2575 3.4555 1.55318 1.61865 13.3458 0.42042 0.327971 6.11829 0 0 6.05923 3.74886 22.3658 42.3819 0

M08884_2.00_shift7 (EGR2)
; oligos_7nt_mkv5_m4 versus M08884_2.00 (EGR2); m=107/165; ncol2=18; w=0; offset=0; strand=D; shift=7; score=0.526037; -------yyCCdCCCmCwC ; cor=; Ncor= a 0 0 0 0 0 0 0 13.6 8.2 10.8 6.2 34.6 2 6 1.8 48.6 1.4 39.6 5.6 c 0 0 0 0 0 0 0 56.2 50.2 78.2 87.4 2.2 91.6 89 79.4 46.2 93 4.4 76.6 g 0 0 0 0 0 0 0 4.8 7.4 3.4 0.6 28.2 4 1.4 0.6 1.2 2.2 19 10.2 t 0 0 0 0 0 0 0 25.4 34.2 7.6 5.8 35 2.4 3.6 18.2 4 3.4 37 7.6

M08243_2.00_shift6 (KLF4)
; oligos_7nt_mkv5_m4 versus M08243_2.00 (KLF4); m=108/165; ncol2=10; w=-1; offset=-1; strand=D; shift=6; score=0.52276; ------gCCmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 21.5541 6.6731 2.8826 47.0176 0.7831 49.183 0.3685 0.2997 0.1386 40.7052 0 0 0 c 0 0 0 0 0 0 6.4761 87.4843 89.9686 50.1722 98.364 0.2536 98.4801 99.0776 97.6252 23.5703 0 0 0 g 0 0 0 0 0 0 66.0954 3.0022 1.0613 1.8427 0.346 44.1938 0.8289 0.3 0.2081 1.8688 0 0 0 t 0 0 0 0 0 0 5.8745 2.8404 6.0875 0.9675 0.5068 6.3696 0.3225 0.3227 2.028 33.8558 0 0 0

M08246_2.00_shift6 (KLF10)
; oligos_7nt_mkv5_m4 versus M08246_2.00 (KLF10); m=109/165; ncol2=10; w=-1; offset=-1; strand=D; shift=6; score=0.52276; ------gCCmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 21.554 6.673 2.8825 47.0175 0.7831 49.183 0.3685 0.2997 0.1386 40.7052 0 0 0 c 0 0 0 0 0 0 6.4761 87.4843 89.9687 50.1723 98.3641 0.2537 98.4802 99.0777 97.6252 23.5703 0 0 0 g 0 0 0 0 0 0 66.0954 3.0023 1.0613 1.8427 0.3461 44.1938 0.8289 0.3001 0.2082 1.8688 0 0 0 t 0 0 0 0 0 0 5.8745 2.8403 6.0874 0.9675 0.5068 6.3696 0.3225 0.3227 2.0279 33.8557 0 0 0

M04457_2.00_shift6 (KLF16)
; oligos_7nt_mkv5_m4 versus M04457_2.00 (KLF16); m=110/165; ncol2=10; w=-1; offset=-1; strand=D; shift=6; score=0.520824; ------rcCmCgCCCm--- ; cor=; Ncor= a 0 0 0 0 0 0 32.0237 21.6005 9.64297 56.0179 0 23.6651 2.08927 5.70598 7.5165 27.5834 0 0 0 c 0 0 0 0 0 0 22.5292 57.0911 77.8929 27.5676 97.7205 13.1345 92.8205 88.8061 78.6577 52.9773 0 0 0 g 0 0 0 0 0 0 35.8502 11.3551 4.04845 9.23888 0 56.8721 1.82336 3.18008 3.21906 3.76509 0 0 0 t 0 0 0 0 0 0 9.59689 9.95327 8.41568 7.17561 2.27954 6.32828 3.26686 2.30783 10.6068 15.6742 0 0 0

M06172_2.00_shift3 (M06172_2.00)
; oligos_7nt_mkv5_m4 versus M06172_2.00; m=111/165; ncol2=15; w=-4; offset=-4; strand=D; shift=3; score=0.519598; ---mvrRCCACACCCaym- ; cor=; Ncor= a 0 0 0 31.4141 26.17 33.4572 27.0446 12.5465 1.11524 84.7584 0.836431 68.9591 0.371747 3.06691 3.15985 55.2974 20.4124 27.0883 0 c 0 0 0 33.7374 31.6141 16.171 0 84.6654 97.7695 10.1301 98.3271 0 98.6989 95.8178 91.0781 18.8662 38.866 35.4415 0 g 0 0 0 17.1717 26.5521 30.4833 71.2825 1.95167 0 4.08922 0 22.026 0 0.27881 0.185874 1.7658 15.1546 13.6038 0 t 0 0 0 17.6768 15.6638 19.8885 1.67286 0.836431 1.11524 1.0223 0.836431 9.01487 0.929368 0.836431 5.57621 24.0706 25.567 23.8663 0

M08086_2.00_shift6 (KLF5)
; oligos_7nt_mkv5_m4 versus M08086_2.00 (KLF5); m=112/165; ncol2=10; w=-1; offset=-1; strand=D; shift=6; score=0.515992; ------gCCMCrCCCh--- ; cor=; Ncor= a 0 0 0 0 0 0 10.4989 0 0 25.5455 0 37.1097 0 0 0 28.7635 0 0 0 c 0 0 0 0 0 0 14.863 87.4293 88.2228 70.3034 100 0 100 100 96.5028 41.1065 0 0 0 g 0 0 0 0 0 0 55.6315 0 0 0 0 38.0721 0 0 0 0 0 0 0 t 0 0 0 0 0 0 19.0067 12.5707 11.7772 4.15105 0 24.8182 0 0 3.49717 30.13 0 0 0

M08894_2.00_shift6 (KLF4)
; oligos_7nt_mkv5_m4 versus M08894_2.00 (KLF4); m=113/165; ncol2=10; w=-1; offset=-1; strand=D; shift=6; score=0.515246; ------rCCmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 0 25 6.6 4.8 55.4 0 52.6 0.6 0.6 0.4 35.6 0 0 0 c 0 0 0 0 0 0 6.8 88.2 88.6 43.8 99.2 0.4 97.8 99.2 98.8 20.4 0 0 0 g 0 0 0 0 0 0 62.8 3.8 1.6 0.4 0.4 44.4 0.4 0 0 2 0 0 0 t 0 0 0 0 0 0 5.4 1.4 5 0.4 0.4 2.6 1.2 0.2 0.8 42 0 0 0

M00738_2.00_shift9 (RBPJ)
; oligos_7nt_mkv5_m4 versus M00738_2.00 (RBPJ); m=114/165; ncol2=8; w=0; offset=2; strand=D; shift=9; score=0.512443; ---------ktTCcCAy-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 21.9174 11.9889 6.11805 2.53896 16.4263 0.893902 79.9384 12.6715 0 0 c 0 0 0 0 0 0 0 0 0 14.1156 18.9912 4.22595 91.997 55.6391 96.3359 3.71083 40.8276 0 0 g 0 0 0 0 0 0 0 0 0 37.9883 13.6532 1.31159 1.10711 6.41659 1.09181 9.78898 19.6752 0 0 t 0 0 0 0 0 0 0 0 0 25.9787 55.3667 88.3444 4.35688 21.5179 1.6784 6.56175 26.8257 0 0

M00226_2.00_shift8 (KLF1)
; oligos_7nt_mkv5_m4 versus M00226_2.00 (KLF1); m=115/165; ncol2=8; w=0; offset=1; strand=D; shift=8; score=0.511695; --------CmCGCCCm--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 8.36106 40.6055 0.0302663 21.2167 0.0302663 0.0302663 0.0302663 52.1267 0 0 0 c 0 0 0 0 0 0 0 0 74.9168 59.3321 96.8826 3.0569 99.9092 99.9092 99.9092 30.4253 0 0 0 g 0 0 0 0 0 0 0 0 4.20133 0.031211 3.0569 75.6961 0.0302663 0.0302663 0.0302663 4.38368 0 0 0 t 0 0 0 0 0 0 0 0 12.5208 0.031211 0.0302663 0.0302663 0.0302663 0.0302663 0.0302663 13.0642 0 0 0

M09428_2.00_rc_shift9 (M09428_2.00_rc)
; oligos_7nt_mkv5_m4 versus M09428_2.00_rc; m=116/165; ncol2=12; w=0; offset=2; strand=R; shift=9; score=0.510531; ---------wytcwCACct ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 32 14 19.4 9.4 53.6 5.4 97.6 0.2 21.6 18 c 0 0 0 0 0 0 0 0 0 22.2 38.6 18 64.6 14.2 94.2 0 73.8 56.4 22.4 g 0 0 0 0 0 0 0 0 0 12.2 13.8 2 23 4.8 0.4 0.6 24.4 1.4 5.8 t 0 0 0 0 0 0 0 0 0 33.6 33.6 60.6 3 27.4 0 1.8 1.6 20.6 53.8

M02931_2.00_shift8 (M02931_2.00)
; oligos_7nt_mkv5_m4 versus M02931_2.00; m=117/165; ncol2=15; w=0; offset=1; strand=D; shift=8; score=0.507924; --------wmCGCCCACGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.3199 65.7557 0 1.79558 0.0547945 0.435967 0.214362 79.5125 0 0.42333 0.162075 c 0 0 0 0 0 0 0 0 24.1051 32.348 99.1347 0.644567 99.6164 99.1281 95.1233 20.3134 99.7272 0.70555 98.9735 g 0 0 0 0 0 0 0 0 9.34004 0.725042 0.270416 96.639 0.109589 0.217984 0.267953 0 0.163666 97.9774 0 t 0 0 0 0 0 0 0 0 35.2349 1.17122 0.594916 0.92081 0.219178 0.217984 4.39443 0.174115 0.109111 0.893697 0.864398

M08099_2.00_shift5 (M08099_2.00)
; oligos_7nt_mkv5_m4 versus M08099_2.00; m=118/165; ncol2=11; w=-2; offset=-2; strand=D; shift=5; score=0.506219; -----rrCCACACCCw--- ; cor=; Ncor= a 0 0 0 0 0 28.5171 31.749 12.7376 2.47148 76.8061 0 76.0456 0 0 0 53.2319 0 0 0 c 0 0 0 0 0 14.4487 7.60456 75.2852 87.6426 22.4335 100 0 100 100 96.5779 6.65399 0 0 0 g 0 0 0 0 0 38.403 57.9848 6.08365 0 0 0 18.4411 0 0 0 0 0 0 0 t 0 0 0 0 0 18.6312 2.6616 5.89354 9.88593 0.760456 0 5.51331 0 0 3.42205 40.1141 0 0 0

M00375_2.00_shift11 (M00375_2.00)
; oligos_7nt_mkv5_m4 versus M00375_2.00; m=119/165; ncol2=9; w=0; offset=4; strand=D; shift=11; score=0.505853; -----------gCCcmCgc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 24.3908 13.6334 2.50247 7.7362 48.4453 2.10408 20.8312 15.2373 c 0 0 0 0 0 0 0 0 0 0 0 12.7331 74.6286 84.5445 67.0817 40.4649 91.2753 12.1393 46.7 g 0 0 0 0 0 0 0 0 0 0 0 41.026 2.7802 9.1823 3.72814 5.15741 0.424807 48.7377 13.9258 t 0 0 0 0 0 0 0 0 0 0 0 21.8501 8.95779 3.77076 21.454 5.93243 6.19585 18.2918 24.1369

M04605_2.00_shift3 (SP1)
; oligos_7nt_mkv5_m4 versus M04605_2.00 (SP1); m=120/165; ncol2=15; w=-4; offset=-4; strand=D; shift=3; score=0.505386; ---ywrRCCACGCCCmCh- ; cor=; Ncor= a 0 0 0 15.8388 55.3795 56.5615 27.8959 1.92315 0.107058 76.8869 0 1.88843 0 0.0161063 0 49.0866 2.36901 25.367 0 c 0 0 0 26.7261 3.67196 2.99495 0 97.665 96.6423 23.1131 99.9376 0 99.9658 99.9839 97.1322 48.1512 74.5634 31.4238 0 g 0 0 0 19.5135 1.95955 38.1259 71.8114 0.163928 0 0 0 96.4043 0 0 0 0.0298507 1.82186 6.12931 0 t 0 0 0 37.9216 38.989 2.31766 0.292655 0.247891 3.25067 0 0.0623855 1.70726 0.0342169 0 2.86784 2.73234 21.2458 37.0799 0

M04463_2.00_shift5 (KLF4)
; oligos_7nt_mkv5_m4 versus M04463_2.00 (KLF4); m=121/165; ncol2=11; w=-2; offset=-2; strand=D; shift=5; score=0.504495; -----srCCACrCCCh--- ; cor=; Ncor= a 0 0 0 0 0 19.0879 35.9409 12.4731 12.5032 70.7975 0.981144 36.0936 0 3.2263 0.720669 41.0845 0 0 0 c 0 0 0 0 0 35.5446 22.9869 71.0434 80.0077 19.148 96.1367 0.575309 99.5713 95.8869 90.3863 26.7783 0 0 0 g 0 0 0 0 0 27.6351 32.6696 8.50799 3.61061 6.79862 0 59.1436 0 0.366972 2.23407 6.79426 0 0 0 t 0 0 0 0 0 17.7324 8.40263 7.97553 3.87854 3.25588 2.88211 4.18749 0.428708 0.519878 6.65898 25.3429 0 0 0

M04400_2.00_shift5 (KLF6)
; oligos_7nt_mkv5_m4 versus M04400_2.00 (KLF6); m=122/165; ncol2=11; w=-2; offset=-2; strand=D; shift=5; score= 0.5042; -----srcCACRCCCm--- ; cor=; Ncor= a 0 0 0 0 0 20.2099 36.7282 17.18 14.1084 84.4376 0 31.8408 0 1.09794 3.03549 43.5675 0 0 0 c 0 0 0 0 0 28.4672 17.3882 66.1836 71.5872 10.9399 98.917 0 100 96.267 93.7153 30.3376 0 0 0 g 0 0 0 0 0 28.5584 41.0575 10.0242 9.7322 2.31125 0 68.1592 0 2.63505 0.51304 2.37226 0 0 0 t 0 0 0 0 0 22.7646 4.82612 6.61232 4.57218 2.31125 1.08303 0 0 0 2.73621 23.7226 0 0 0

M09516_2.00_shift5 (M09516_2.00)
; oligos_7nt_mkv5_m4 versus M09516_2.00; m=123/165; ncol2=12; w=-2; offset=-2; strand=D; shift=5; score=0.503528; -----rrCCACACCCwk-- ; cor=; Ncor= a 0 0 0 0 0 35.4 30.8 11.7 0.1 84.3 0.1 91.5 0.1 0.1 0.1 54.6 19.5 0 0 c 0 0 0 0 0 6.7 2.4 78.1 99.7 15.5 99.7 0.1 99.7 99.7 99.7 5.1 23 0 0 g 0 0 0 0 0 41.1 63 5.4 0.1 0.1 0.1 4.9 0.1 0.1 0.1 0.1 30.6 0 0 t 0 0 0 0 0 16.8 3.9 4.7 0.1 0.1 0.1 3.5 0.1 0.1 0.1 40.2 26.8 0 0

M06170_2.00_shift5 (M06170_2.00)
; oligos_7nt_mkv5_m4 versus M06170_2.00; m=124/165; ncol2=11; w=-2; offset=-2; strand=D; shift=5; score=0.502869; -----rrCCACrCCCa--- ; cor=; Ncor= a 0 0 0 0 0 29.3362 38.3282 10.202 8.68687 76.7677 2.72727 33.0303 3.13131 3.13131 2.42669 50.1523 0 0 0 c 0 0 0 0 0 13.4904 2.95617 78.8889 82.6263 21.4141 97.0707 0 96.8687 96.6667 93.1244 20.3046 0 0 0 g 0 0 0 0 0 45.5032 51.2742 4.54545 1.81818 1.51515 0 65.0505 0 0 0 5.27919 0 0 0 t 0 0 0 0 0 11.6702 7.44139 6.36364 6.86869 0.30303 0.20202 1.91919 0 0.20202 4.44894 24.264 0 0 0

M02879_2.00_shift3 (SP4)
; oligos_7nt_mkv5_m4 versus M02879_2.00 (SP4); m=125/165; ncol2=17; w=-4; offset=-4; strand=D; shift=3; score=0.501228; ---ywrGCCACGCCCmCty ; cor=; Ncor= a 0 0 0 13.8895 51.7012 56.719 16.3731 5.52369 0.0431593 75.1376 0.0428816 0.181061 0.0426712 0.0633312 0 42.3378 2.06317 21.4528 13.7621 c 0 0 0 31.4247 3.71163 3.18499 0.104621 94.3913 96.9357 24.7874 99.9571 0.253485 99.872 99.8944 98.4184 55.9135 78.0719 16.8799 28.5174 g 0 0 0 18.4075 1.54651 35.7548 83.2432 0 0.107898 0.0750375 0 98.5696 0.0853424 0.0422208 0.0632644 0.207087 0.383422 4.40346 8.58359 t 0 0 0 36.2782 43.0407 4.34119 0.278989 0.0849798 2.91325 0 0 0.995836 0 0 1.51835 1.54165 19.4815 57.2638 49.1369

M04411_2.00_shift6 (KLF5)
; oligos_7nt_mkv5_m4 versus M04411_2.00 (KLF5); m=126/165; ncol2=10; w=-1; offset=-1; strand=D; shift=6; score=0.500288; ------gmCACrCCcw--- ; cor=; Ncor= a 0 0 0 0 0 0 24.8178 32.3229 3.91576 68.5657 0 26.6089 5.11935 11.351 6.89405 31.3047 0 0 0 c 0 0 0 0 0 0 16.691 52.5827 90.2929 13.4433 96.1121 0.585069 86.1809 80.07 66.3764 21.7566 0 0 0 g 0 0 0 0 0 0 43.7682 5.62945 1.54656 8.9955 0 64.2172 1.60176 5.31077 3.9671 10.605 0 0 0 t 0 0 0 0 0 0 14.723 9.46489 4.24482 8.9955 3.88792 8.58881 7.09799 3.26816 22.7625 36.3338 0 0 0

M04458_2.00_shift6 (KLF16)
; oligos_7nt_mkv5_m4 versus M04458_2.00 (KLF16); m=127/165; ncol2=10; w=-1; offset=-1; strand=D; shift=6; score=0.497898; ------rcCACGCCCc--- ; cor=; Ncor= a 0 0 0 0 0 0 26.7813 23.9973 3.34076 78.7996 0 21.2741 0 1.33281 2.78963 22.6454 0 0 0 c 0 0 0 0 0 0 10.8518 54.7166 90.6459 10.2614 100 2.62548 100 95.7272 80.1444 57.5348 0 0 0 g 0 0 0 0 0 0 52.9075 8.29039 2.37565 2.19426 0 73.0116 0 1.17601 0.0656383 3.1941 0 0 0 t 0 0 0 0 0 0 9.45946 12.9957 3.63771 8.74476 0 3.0888 0 1.76401 17.0003 16.6257 0 0 0

M08287_2.00_shift7 (PATZ1)
; oligos_7nt_mkv5_m4 versus M08287_2.00 (PATZ1); m=128/165; ncol2=8; w=0; offset=0; strand=D; shift=7; score=0.497737; -------CCCCkCCC---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 7.7333 0 0 22.1333 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 94.1333 81.0667 100 100 0 100 100 84 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 35.2 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 5.8667 11.2 0 0 42.6667 0 0 16 0 0 0 0

M04455_2.00_shift5 (KLF2)
; oligos_7nt_mkv5_m4 versus M04455_2.00 (KLF2); m=129/165; ncol2=11; w=-2; offset=-2; strand=D; shift=5; score=0.494749; -----srCCmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 22.804 40.76 11.9439 7.29676 56.6352 0 33.6164 0 2.58377 1.29796 39.7663 0 0 0 c 0 0 0 0 0 29.7707 17.9117 74.5003 83.6864 27.754 98.3404 5.41181 98.4871 93.2983 88.2229 24.7079 0 0 0 g 0 0 0 0 0 28.5591 34.2968 7.97872 3.36773 12.9886 0 57.6733 1.04411 3.93621 2.0042 8.41627 0 0 0 t 0 0 0 0 0 18.8663 7.0315 5.57705 5.6491 2.62223 1.65957 3.29844 0.468783 0.181671 8.4749 27.1095 0 0 0

M06160_2.00_shift3 (M06160_2.00)
; oligos_7nt_mkv5_m4 versus M06160_2.00; m=130/165; ncol2=15; w=-4; offset=-4; strand=D; shift=3; score=0.493149; ---kwrGCCmCGCCCmcy- ; cor=; Ncor= a 0 0 0 11.04 33.6 27.8219 17.3291 6.51828 4.45151 39.4277 0.63593 3.6566 0.794913 0.63593 1.27186 43.0843 7.3955 22.8525 0 c 0 0 0 19.04 8.96 11.2878 0.953895 81.2401 72.496 60.5723 99.2051 0 99.2051 99.3641 81.876 42.1304 62.701 27.2285 0 g 0 0 0 25.12 14.4 42.4483 74.2448 5.40541 1.27186 0 0 90.461 0 0 0 1.43084 7.55627 13.128 0 t 0 0 0 44.8 43.04 18.442 7.47218 6.83625 21.7806 0 0.158983 5.88235 0 0 16.8521 13.3545 22.3473 36.7909 0

M08021_2.00_shift5 (M08021_2.00)
; oligos_7nt_mkv5_m4 versus M08021_2.00; m=131/165; ncol2=11; w=-2; offset=-2; strand=D; shift=5; score=0.492963; -----rrCCmCrCCCw--- ; cor=; Ncor= a 0 0 0 0 0 27.5748 27.2425 4.6512 3.6545 45.515 0 52.4917 0 0 0 39.5349 0 0 0 c 0 0 0 0 0 21.2625 6.9767 87.3754 86.7109 49.5017 100 0 100 100 98.6711 19.6013 0 0 0 g 0 0 0 0 0 39.5349 56.1462 2.3256 0 0.996699 0 36.8771 0 0 0 2.6578 0 0 0 t 0 0 0 0 0 11.6279 9.6346 5.6478 9.63459 3.9867 0 10.6312 0 0 1.3289 38.206 0 0 0

M04464_2.00_shift5 (KLF4)
; oligos_7nt_mkv5_m4 versus M04464_2.00 (KLF4); m=132/165; ncol2=11; w=-2; offset=-2; strand=D; shift=5; score=0.489271; -----crCCmCrCCCa--- ; cor=; Ncor= a 0 0 0 0 0 16.7449 31.7536 4.96811 6.89314 53.6107 0 33.5846 0 1.09954 0 38.0943 0 0 0 c 0 0 0 0 0 43.525 22.8541 85.8006 84.3008 38.4297 96.0541 0 99.7269 98.6111 96.1806 22.9896 0 0 0 g 0 0 0 0 0 18.0164 35.545 3.12185 4.86478 4.50207 0.244269 61.163 0 0.270062 0.865475 15.0068 0 0 0 t 0 0 0 0 0 21.7136 9.84729 6.10943 3.94129 3.45759 3.70162 5.25245 0.273117 0.0192901 2.9539 23.9092 0 0 0

M00241_2.00_shift9 (KLF11)
; oligos_7nt_mkv5_m4 versus M00241_2.00 (KLF11); m=133/165; ncol2=8; w=0; offset=2; strand=D; shift=9; score=0.483649; ---------mCGCCCCC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 38.4202 0.0499002 10.0299 5.03992 5.03992 0.0499002 25 0.0664894 0 0 c 0 0 0 0 0 0 0 0 0 61.4264 99.8503 10.0299 94.8603 89.8703 99.8503 74.9002 93.1516 0 0 g 0 0 0 0 0 0 0 0 0 0.0766871 0.0499002 79.8902 0.0499002 5.03992 0.0499002 0.0499002 0.0664894 0 0 t 0 0 0 0 0 0 0 0 0 0.0766871 0.0499002 0.0499002 0.0499002 0.0499002 0.0499002 0.0499002 6.71543 0 0

M01917_2.00_rc_shift11 (M01917_2.00_rc)
; oligos_7nt_mkv5_m4 versus M01917_2.00_rc; m=134/165; ncol2=8; w=0; offset=4; strand=R; shift=11; score=0.482709; -----------tCCCCCCc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 10.8757 6.35513 3.18153 0.801333 3.97493 2.38813 7.38283 7.34593 c 0 0 0 0 0 0 0 0 0 0 0 23.9135 78.5544 81.728 97.596 93.629 87.2818 68.0187 62.3716 g 0 0 0 0 0 0 0 0 0 0 0 17.3946 7.94192 8.73532 1.59473 2.38813 8.73532 20.4933 17.434 t 0 0 0 0 0 0 0 0 0 0 0 47.8162 7.14852 6.35513 0.00793399 0.00793399 1.59473 4.10521 12.8485

M07602_2.00_rc_shift3 (ZNF18_rc)
; oligos_7nt_mkv5_m4 versus M07602_2.00_rc (ZNF18_rc); m=135/165; ncol2=15; w=-4; offset=-4; strand=R; shift=3; score=0.482636; ---mcscswgyTCACACy- ; cor=; Ncor= a 0 0 0 26.6667 22.4691 21.2346 20.4938 12.8395 32.3457 24.4444 1.4815 6.6667 0 76.5432 0 98.7654 0 15.5556 0 c 0 0 0 33.5802 43.2099 31.358 45.9259 48.642 16.2963 22.963 27.6543 0.7407 100 17.7778 100 0 93.0864 47.1605 0 g 0 0 0 21.7284 19.5062 26.9136 20.4938 26.6667 24.4444 52.0988 4.1975 2.4691 0 0.4938 0 0 4.6914 1.2346 0 t 0 0 0 18.0247 14.8148 20.4938 13.0864 11.8519 26.9136 0.4938 66.6667 90.1235 0 5.1852 0 1.2346 2.2222 36.0494 0

M02821_2.00_rc_shift11 (MGA_rc)
; oligos_7nt_mkv5_m4 versus M02821_2.00_rc (MGA_rc); m=136/165; ncol2=8; w=0; offset=4; strand=R; shift=11; score=0.477102; -----------TCACACCT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0.861825 16.4103 87.1089 0.0360478 89.3293 0.334212 4.76708 9.31211 c 0 0 0 0 0 0 0 0 0 0 0 2.89372 77.3911 1.08854 99.9148 0.281269 97.9787 75.3466 19.8621 g 0 0 0 0 0 0 0 0 0 0 0 0.345988 4.44969 8.82546 0.00327708 10.3542 1.63571 9.23514 2.5765 t 0 0 0 0 0 0 0 0 0 0 0 95.8985 1.74891 2.97706 0.0458791 0.0351587 0.0514172 10.6512 68.2493

M04430_2.00_shift5 (KLF12)
; oligos_7nt_mkv5_m4 versus M04430_2.00 (KLF12); m=137/165; ncol2=11; w=-2; offset=-2; strand=D; shift=5; score=0.475078; -----grCCACGCCCw--- ; cor=; Ncor= a 0 0 0 0 0 18.9257 50.9479 1.21865 0.89222 94.709 0 20.7498 0.179051 0.0358809 0 44.392 0 0 0 c 0 0 0 0 0 12.1846 3.44709 98.0042 99.0186 4.60829 99.3554 1.92281 99.3554 99.5515 97.4192 24.1058 0 0 0 g 0 0 0 0 0 47.9092 44.6915 0.0529848 0 0.68271 0 76.7603 0.107431 0.41263 0.438904 0.998785 0 0 0 t 0 0 0 0 0 20.9805 0.913478 0.724126 0.089222 0 0.644584 0.56716 0.358102 0 2.14185 30.5034 0 0 0

M09426_2.00_rc_shift10 (TBX3_rc)
; oligos_7nt_mkv5_m4 versus M09426_2.00_rc (TBX3_rc); m=138/165; ncol2=11; w=0; offset=3; strand=R; shift=10; score=0.473034; ----------yTscCACCt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 8.33333 6.90476 15.7143 24.2857 1.42857 94.2857 1.19048 0.238095 23.0952 c 0 0 0 0 0 0 0 0 0 0 40.2381 20.2381 42.381 43.5714 96.9048 1.42857 84.2857 92.381 17.381 g 0 0 0 0 0 0 0 0 0 0 9.04762 2.61905 26.1905 21.9048 0 0.714286 13.3333 0 0.47619 t 0 0 0 0 0 0 0 0 0 0 42.381 70.2381 15.7143 10.2381 1.66667 3.57143 1.19048 7.38095 59.0476

M00242_2.00_shift9 (KLF11)
; oligos_7nt_mkv5_m4 versus M00242_2.00 (KLF11); m=139/165; ncol2=8; w=0; offset=2; strand=D; shift=9; score=0.47193; ---------mCGCCCCC-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 35.6838 0.052521 5.30462 5.30462 0.052521 0.052521 21.0609 0.0766871 0 0 c 0 0 0 0 0 0 0 0 0 64.1738 99.8424 10.5567 94.5903 94.5903 99.8424 78.834 92.1012 0 0 g 0 0 0 0 0 0 0 0 0 0.0712251 0.052521 84.0861 0.052521 5.30462 0.052521 0.052521 0.0766871 0 0 t 0 0 0 0 0 0 0 0 0 0.0712251 0.052521 0.052521 0.052521 0.052521 0.052521 0.052521 7.7454 0 0

M04432_2.00_shift5 (KLF12)
; oligos_7nt_mkv5_m4 versus M04432_2.00 (KLF12); m=140/165; ncol2=11; w=-2; offset=-2; strand=D; shift=5; score=0.470299; -----krCCACGCCCw--- ; cor=; Ncor= a 0 0 0 0 0 14.0196 31.711 2.2747 0.221772 90.5985 0 15.8033 0.051164 0.172546 0.0776583 44.5923 0 0 0 c 0 0 0 0 0 17.2012 0.790089 96.8204 98.9799 7.90512 99.968 0.241805 99.9041 99.8275 93.3154 15.7603 0 0 0 g 0 0 0 0 0 36.1757 67.0312 0.216933 0.627297 1.24116 0 83.9387 0 0 0.041816 11.5691 0 0 0 t 0 0 0 0 0 32.6035 0.467733 0.687988 0.171081 0.255191 0.031998 0.0161204 0.0447685 0 6.56511 28.0783 0 0 0

M04456_2.00_shift5 (KLF2)
; oligos_7nt_mkv5_m4 versus M04456_2.00 (KLF2); m=141/165; ncol2=11; w=-2; offset=-2; strand=D; shift=5; score=0.469392; -----srCCmCrCCCm--- ; cor=; Ncor= a 0 0 0 0 0 21.2044 38.0149 6.81334 0.934809 48.188 0 37.9653 0 1.70501 0 31.1281 0 0 0 c 0 0 0 0 0 34.4925 19.6371 83.6764 87.0111 42.1117 100 1.9024 99.2424 95.724 90.5994 30.393 0 0 0 g 0 0 0 0 0 26.4348 37.46 6.52945 10.9717 6.82561 0 59.5533 0.701459 2.24628 3.61168 17.7269 0 0 0 t 0 0 0 0 0 17.8682 4.88794 2.98084 1.08241 2.87466 0 0.578991 0.0561167 0.324763 5.78893 20.752 0 0 0

M08290_2.00_shift6 (MAZ)
; oligos_7nt_mkv5_m4 versus M08290_2.00 (MAZ); m=142/165; ncol2=9; w=-1; offset=-1; strand=D; shift=6; score=0.467603; ------sCCCCkCCC---- ; cor=; Ncor= a 0 0 0 0 0 0 2.21823 0.059952 0.059952 0.059952 0.059952 8.93285 0.059952 0.059952 0.059952 0 0 0 0 c 0 0 0 0 0 0 52.8177 92.1463 99.8201 99.8201 99.8201 0.059952 99.8201 99.8201 88.789 0 0 0 0 g 0 0 0 0 0 0 37.7098 0.059952 0.059952 0.059952 0.059952 35.3118 0.059952 0.059952 0.059952 0 0 0 0 t 0 0 0 0 0 0 7.2542 7.73381 0.059952 0.059952 0.059952 55.6954 0.059952 0.059952 11.0911 0 0 0 0

M04529_2.00_shift2 (ZNF444)
; oligos_7nt_mkv5_m4 versus M04529_2.00 (ZNF444); m=143/165; ncol2=16; w=-5; offset=-5; strand=D; shift=2; score=0.465206; --ccGTCCCCCTCCCCCm- ; cor=; Ncor= a 0 0 18.4334 8.68599 21.0837 15.4828 0.210084 0.26866 0.175152 0.0233454 0.687886 0.418118 0.0700853 0.21028 0.0935126 0.287158 0.174948 26.0202 0 c 0 0 36.7144 67.4881 6.29233 11.9161 99.288 99.5211 99.5213 99.4631 99.1139 0.778165 99.5795 99.5794 99.6143 94.8771 99.4868 44.137 0 g 0 0 24.6717 10.7262 70.035 1.145 0.233427 0.093447 0 0.163418 0.0466364 0.139373 0 0.0350467 0.0935126 0.160809 0.0349895 7.24672 0 t 0 0 20.1806 13.0997 2.58903 71.4561 0.268441 0.116809 0.303596 0.350181 0.151568 98.6643 0.350426 0.175234 0.198714 4.67494 0.303242 22.5962 0

M04530_2.00_shift2 (ZNF444)
; oligos_7nt_mkv5_m4 versus M04530_2.00 (ZNF444); m=144/165; ncol2=16; w=-5; offset=-5; strand=D; shift=2; score=0.464099; --ccrtCCCCCTCCCCCm- ; cor=; Ncor= a 0 0 14.2547 10.0366 35.0522 21.7179 0.373886 0.461095 0.373778 0 0.78853 0.358372 0.387041 0.13002 0.628661 0.311791 0.45977 29.0635 0 c 0 0 44.11 65.1368 5.80812 13.4159 99.0653 99.3228 99.1518 99.812 98.7814 0.874427 98.9392 99.7544 98.6998 95.7058 98.9943 42.1769 0 g 0 0 21.5485 11.3731 56.9684 0.675169 0.345125 0.0432277 0 0 0.157706 0.0286697 0.0716743 0.0866802 0.171453 0 0.445402 9.19091 0 t 0 0 20.0868 13.4535 2.17126 64.191 0.215703 0.172911 0.474411 0.18797 0.272401 98.7385 0.602064 0.0288934 0.500071 3.98243 0.100575 19.5687 0

M04419_2.00_shift5 (KLF3)
; oligos_7nt_mkv5_m4 versus M04419_2.00 (KLF3); m=145/165; ncol2=11; w=-2; offset=-2; strand=D; shift=5; score=0.46156; -----grCCACGCCCw--- ; cor=; Ncor= a 0 0 0 0 0 15.9938 47.08 3.29544 1.0131 76.5579 13.8831 6.9486 0.709143 0.996102 0.88967 38.8752 0 0 0 c 0 0 0 0 0 8.49124 2.77719 91.1855 96.5735 3.99882 84.6798 3.09459 98.5601 98.5654 96.9954 22.0684 0 0 0 g 0 0 0 0 0 60.2076 49.233 4.14183 0.896409 17.282 0.088368 86.4161 0.357278 0.438502 0.559374 11.902 0 0 0 t 0 0 0 0 0 15.3073 0.90986 1.37727 1.517 2.1613 1.34877 3.54075 0.373518 0 1.55559 27.1544 0 0 0

M04401_2.00_shift5 (KLF6)
; oligos_7nt_mkv5_m4 versus M04401_2.00 (KLF6); m=146/165; ncol2=11; w=-2; offset=-2; strand=D; shift=5; score=0.459423; -----yRCCACGCCCh--- ; cor=; Ncor= a 0 0 0 0 0 16.1856 25.313 3.89228 0.376832 78.7906 0 19.1863 0 0 0.255587 32.9455 0 0 0 c 0 0 0 0 0 29.9023 0.915282 94.0248 93.559 4.83662 99.8808 0 100 100 87.8629 25.1809 0 0 0 g 0 0 0 0 0 21.444 72.8637 0.785469 5.94557 16.3728 0.119198 80.8137 0 0 0.327675 12.0459 0 0 0 t 0 0 0 0 0 32.4681 0.907959 1.29743 0.118632 0 0 0 0 0 11.5538 29.8277 0 0 0

M06163_2.00_shift5 (M06163_2.00)
; oligos_7nt_mkv5_m4 versus M06163_2.00; m=147/165; ncol2=10; w=-2; offset=-2; strand=D; shift=5; score=0.455068; -----rrchmCRCCC---- ; cor=; Ncor= a 0 0 0 0 0 35.7143 37.5 18.75 37.5 62.5 0 31.25 0 0 0 0 0 0 0 c 0 0 0 0 0 0 12.5 62.5 31.25 37.5 100 0 100 100 100 0 0 0 0 g 0 0 0 0 0 64.2857 43.75 12.5 0 0 0 68.75 0 0 0 0 0 0 0 t 0 0 0 0 0 0 6.25 6.25 31.25 0 0 0 0 0 0 0 0 0 0

M07754_2.00_shift4 (ZNF468)
; oligos_7nt_mkv5_m4 versus M07754_2.00 (ZNF468); m=148/165; ncol2=12; w=-3; offset=-3; strand=D; shift=4; score=0.454048; ----CrCCCCCTCCCh--- ; cor=; Ncor= a 0 0 0 0 16.3043 42.6812 0.942029 0.0724638 0.0724638 0.0724638 0.0724638 2.97101 0.0724638 0.942029 0.942029 25.8696 0 0 0 c 0 0 0 0 77.7536 0.942029 84.7101 98.913 88.4783 99.7826 99.4928 0.0724638 99.7826 98.3333 93.4058 30.7971 0 0 0 g 0 0 0 0 2.10145 46.1594 9.92754 0.362319 0.0724638 0.0724638 0.0724638 0.652174 0.0724638 0.362319 0.942029 8.76812 0 0 0 t 0 0 0 0 3.84058 10.2174 4.42029 0.652174 11.3768 0.0724638 0.362319 96.3043 0.0724638 0.362319 4.71014 34.5652 0 0 0

M04418_2.00_shift5 (KLF3)
; oligos_7nt_mkv5_m4 versus M04418_2.00 (KLF3); m=149/165; ncol2=11; w=-2; offset=-2; strand=D; shift=5; score=0.453043; -----grCCrCGCCCw--- ; cor=; Ncor= a 0 0 0 0 0 17.8391 56.193 3.04476 0.675125 60.2825 4.81576 8.65443 0.464453 0.191372 0.172638 39.3652 0 0 0 c 0 0 0 0 0 6.13745 1.39513 91.3408 98.0041 1.59284 92.1384 0.680938 99.4643 99.7418 96.9889 23.3454 0 0 0 g 0 0 0 0 0 61.4161 41.9423 4.12584 0.561849 37.1806 0.0447284 88.1937 0.0712775 0.066865 0.107618 3.49985 0 0 0 t 0 0 0 0 0 14.6074 0.469579 1.4886 0.758949 0.943991 3.00106 2.47095 0 0 2.73082 33.7895 0 0 0

M08209_2.00_rc_shift6 (SIX5_rc)
; oligos_7nt_mkv5_m4 versus M08209_2.00_rc (SIX5_rc); m=150/165; ncol2=8; w=-1; offset=-1; strand=R; shift=6; score=0.452073; ------ACAaCTCC----- ; cor=; Ncor= a 0 0 0 0 0 0 75.7231 7.6446 79.9587 66.6322 5.8884 6.3017 8.16119 2.4793 0 0 0 0 0 c 0 0 0 0 0 0 10.0207 79.0289 7.438 12.3967 72.5207 7.0248 81.3016 93.0785 0 0 0 0 0 g 0 0 0 0 0 0 8.0579 10.4339 7.6446 12.1901 6.6116 5.6818 3.5124 1.343 0 0 0 0 0 t 0 0 0 0 0 0 6.1983 2.8926 4.9587 8.781 14.9793 80.9917 7.02479 3.0992 0 0 0 0 0

M04541_2.00_shift9 (ZNF282)
; oligos_7nt_mkv5_m4 versus M04541_2.00 (ZNF282); m=151/165; ncol2=14; w=0; offset=2; strand=D; shift=9; score=0.450078; ---------wtTCCCmyaA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 25.0583 21.0127 8.34057 1.24434 1.37773 1.0989 60.9407 3.43716 49.8837 84.8814 c 0 0 0 0 0 0 0 0 0 22.028 16.0127 10.6864 97.1719 98.6223 94.3956 26.9939 59.8281 15.2326 14.1304 g 0 0 0 0 0 0 0 0 0 19.5804 8.60759 6.34231 0.904977 0 0.43956 0.817996 4.18904 21.2791 0.790514 t 0 0 0 0 0 0 0 0 0 33.3333 54.3671 74.6308 0.678733 0 4.06593 11.2474 32.5456 13.6047 0.197628

M07929_2.00_shift0 (EGR1)
; oligos_7nt_mkv5_m4 versus M07929_2.00 (EGR1); m=152/165; ncol2=20; w=-7; offset=-7; strand=D; shift=0; score=0.442012; ccsccssccCCGCCCmCGC ; cor=; Ncor= a 13.9394 15.1515 12.7273 16.9697 17.1717 18.1818 10.101 16.9697 13.5354 18.3838 0.404 19.798 0 0 0 51.5151 0 7.0707 0 c 46.2626 45.6566 46.0606 44.2424 48.2828 35.5556 48.8889 44.4444 40 73.9394 97.9798 0 100 99.798 95.1515 47.6768 99.798 0.6061 90.3031 g 24.4444 22.6263 25.6566 23.0303 17.7778 29.4949 25.0505 18.7879 21.6162 0.8081 0 69.6969 0 0.202 0 0.808099 0.202 80.202 4.2424 t 15.3535 16.5657 15.5556 15.7576 16.7677 16.7677 15.9596 19.798 24.8485 6.8687 1.6162 10.5051 0 0 4.8485 0 0 12.1212 5.45451

M10186_2.00_shift12 (KLF12)
; oligos_7nt_mkv5_m4 versus M10186_2.00 (KLF12); m=153/165; ncol2=7; w=0; offset=5; strand=D; shift=12; score=0.441652; ------------cccACtG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 18.1818 18.1818 9.09091 81.8182 0 18.1818 9.09091 c 0 0 0 0 0 0 0 0 0 0 0 0 54.5455 63.6364 63.6364 0 81.8182 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 9.09091 9.09091 9.09091 18.1818 9.09091 18.1818 72.7273 t 0 0 0 0 0 0 0 0 0 0 0 0 18.1818 9.09091 18.1818 0 9.09091 63.6364 18.1818

M08937_2.00_shift1 (WT1)
; oligos_7nt_mkv5_m4 versus M08937_2.00 (WT1); m=154/165; ncol2=20; w=-6; offset=-6; strand=D; shift=1; score=0.440246; -CycCycCyCCTCCYyCbC ; cor=; Ncor= a 0 2.6 5 3.8 6 9.2 5.6 1.2 3.8 4.4 1 2.2 0 1.2 0.8 6.2 1.4 14.6 3.8 c 0 68 47.2 67.4 75.2 38.8 51.6 71.4 38.6 90.8 97 0.4 97.2 95.6 71.4 59.6 80.4 27.6 76.2 g 0 8 10.8 9.4 6.8 21.4 18.6 3.6 10 1.2 0.8 14.8 1.6 2.6 2.6 5.2 8.4 30.4 11.2 t 0 21.4 37 19.4 12 30.6 24.2 23.8 47.6 3.6 1.2 82.6 1.2 0.6 25.2 29 9.8 27.4 8.8

M08968_2.00_shift1 (M08968_2.00)
; oligos_7nt_mkv5_m4 versus M08968_2.00; m=155/165; ncol2=20; w=-6; offset=-6; strand=D; shift=1; score=0.440246; -CycCycCyCCTCCYyCbC ; cor=; Ncor= a 0 2.6 5 3.8 6 9.2 5.6 1.2 3.8 4.4 1 2.2 0 1.2 0.8 6.2 1.4 14.6 3.8 c 0 68 47.2 67.4 75.2 38.8 51.6 71.4 38.6 90.8 97 0.4 97.2 95.6 71.4 59.6 80.4 27.6 76.2 g 0 8 10.8 9.4 6.8 21.4 18.6 3.6 10 1.2 0.8 14.8 1.6 2.6 2.6 5.2 8.4 30.4 11.2 t 0 21.4 37 19.4 12 30.6 24.2 23.8 47.6 3.6 1.2 82.6 1.2 0.6 25.2 29 9.8 27.4 8.8

M01864_2.00_shift12 (M01864_2.00)
; oligos_7nt_mkv5_m4 versus M01864_2.00; m=156/165; ncol2=9; w=0; offset=5; strand=D; shift=12; score=0.435308; ------------CCCmCGc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 16.0527 1.55222 2.3878 48.8627 1.22013 16.7571 8.3944 c 0 0 0 0 0 0 0 0 0 0 0 0 73.3965 93.6616 88.2675 47.8952 96.4432 2.79778 59.0016 g 0 0 0 0 0 0 0 0 0 0 0 0 4.64539 4.13583 1.01043 1.76653 0.65636 68.6365 10.4601 t 0 0 0 0 0 0 0 0 0 0 0 0 5.90545 0.650307 8.33424 1.47553 1.68027 11.8086 22.144

M04554_2.00_shift6 (KLF11)
; oligos_7nt_mkv5_m4 versus M04554_2.00 (KLF11); m=157/165; ncol2=22; w=-1; offset=-1; strand=D; shift=6; score=0.429316; ------rcCACrCCCmcgc ; cor=; Ncor= a 0 0 0 0 0 0 28.8489 19.7979 10.425 69.4809 0.760334 31.7458 0 0.531684 0.118977 43.5945 7.26678 20.5346 22.0646 c 0 0 0 0 0 0 19.4326 61.5644 79.0845 22.8657 97.6012 0.514664 99.9237 99.4358 88.0329 43.2999 67.6378 22.4113 60.5522 g 0 0 0 0 0 0 43.066 9.90831 3.8113 6.64951 0.0428357 63.7693 0 0.0108507 0.198295 1.866 6.37207 42.8805 4.37582 t 0 0 0 0 0 0 8.65248 8.72942 6.67912 1.00386 1.59563 3.97026 0.0763359 0.0217014 11.6498 11.2396 18.7234 14.1735 13.0074

M04431_2.00_shift4 (KLF12)
; oligos_7nt_mkv5_m4 versus M04431_2.00 (KLF12); m=158/165; ncol2=12; w=-3; offset=-3; strand=D; shift=4; score=0.427262; ----rGcCGACGCCCw--- ; cor=; Ncor= a 0 0 0 0 47.6712 15.894 6.21572 0 15.4275 93.1298 0 6.03015 0 0 0 44.9597 0 0 0 c 0 0 0 0 5.47945 1.10375 66.9104 99.4565 13.9405 6.36132 100 1.25628 99.7275 99.4565 91.9598 13.3065 0 0 0 g 0 0 0 0 38.6301 80.7947 19.5612 0.543478 68.0297 0 0 91.9598 0 0 0.251256 12.9032 0 0 0 t 0 0 0 0 8.21918 2.20751 7.31261 0 2.60223 0.508906 0 0.753769 0.27248 0.543478 7.78894 28.8306 0 0 0

M04555_2.00_shift6 (KLF11)
; oligos_7nt_mkv5_m4 versus M04555_2.00 (KLF11); m=159/165; ncol2=22; w=-1; offset=-1; strand=D; shift=6; score=0.426698; ------rmCACrCCCmcsm ; cor=; Ncor= a 0 0 0 0 0 0 27.2131 25.8017 6.88056 68.9189 1.2987 31.2951 0 0.0291206 0.144196 36.8329 8.86556 19.0608 27.4278 c 0 0 0 0 0 0 20.3588 53.9309 80.6868 21.8115 97.317 0.794397 100 99.8981 77.2891 42.1551 64.4649 25.4047 48.3085 g 0 0 0 0 0 0 40.0904 8.20849 6.05339 7.13648 0.185529 59.9666 0 0.0728014 0.0240327 2.84339 5.29309 36.2258 6.16798 t 0 0 0 0 0 0 12.3378 12.0589 6.37925 2.13312 1.1988 7.94397 0 0 22.5427 18.1686 21.3765 19.3087 18.0957

M07927_2.00_shift1 (EGR1)
; oligos_7nt_mkv5_m4 versus M07927_2.00 (EGR1); m=160/165; ncol2=20; w=-6; offset=-6; strand=D; shift=1; score=0.425071; -ccscscccCCGCCCmCGC ; cor=; Ncor= a 0 13.0705 16.1826 11.6183 17.0124 13.9004 13.0705 12.6556 12.0332 15.7676 1.0373 19.2946 0 0 0 43.5685 0 5.6017 0 c 0 48.1328 49.5851 44.1909 45.8506 38.1743 49.7925 47.3029 41.0788 76.3486 97.5104 0 100 100 94.6058 56.0166 100 0 92.1162 g 0 22.6141 22.8216 25.1037 18.4647 30.7054 20.5394 17.4274 21.9917 2.4896 0.2075 71.5768 0 0 0 0.4149 0 85.6846 4.3568 t 0 16.1826 11.4108 19.0871 18.6722 17.2199 16.5975 22.6141 24.8963 5.39421 1.2448 9.1286 0 0 5.3942 0 0 8.7137 3.527

M07626_2.00_shift10 (ZNF282)
; oligos_7nt_mkv5_m4 versus M07626_2.00 (ZNF282); m=161/165; ncol2=6; w=0; offset=3; strand=D; shift=10; score=0.423707; ----------CTCCCs--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 0 0 0 c 0 0 0 0 0 0 0 0 0 0 99.7614 0.0795234 99.7614 99.7614 99.7614 56.9037 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 42.9372 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0.0795234 99.7614 0.0795234 0.0795234 0.0795234 0.0795234 0 0 0

M01259_2.00_shift5 (MSANTD3)
; oligos_7nt_mkv5_m4 versus M01259_2.00 (MSANTD3); m=162/165; ncol2=10; w=-2; offset=-2; strand=D; shift=5; score=0.421515; -----stmCACTCAm---- ; cor=; Ncor= a 0 0 0 0 0 9.80188 11.1529 33.2995 6.49812 98.067 3.14412 3.70233 4.746 77.5897 27.1186 0 0 0 0 c 0 0 0 0 0 26.912 21.1512 27.2634 72.3498 0.0102104 89.616 0.793709 86.2544 14.0333 56.8387 0 0 0 0 g 0 0 0 0 0 51.5511 22.0144 24.9168 3.1315 0.231228 2.73336 0.0196233 2.96626 2.43863 6.36121 0 0 0 0 t 0 0 0 0 0 11.735 45.6816 14.5202 18.0206 1.69156 4.50656 95.4843 6.03334 5.93837 9.68151 0 0 0 0

M00231_2.00_shift12 (EGR2)
; oligos_7nt_mkv5_m4 versus M00231_2.00 (EGR2); m=163/165; ncol2=8; w=0; offset=5; strand=D; shift=12; score=0.414751; ------------mCCmCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 36.8338 0.0120424 0.0120424 43.3646 0.0120424 10.9824 0.013151 c 0 0 0 0 0 0 0 0 0 0 0 0 56.1185 99.9639 99.9639 56.6113 98.7596 2.45002 93.3851 g 0 0 0 0 0 0 0 0 0 0 0 0 1.77069 0.0120424 0.0120424 0.0120424 1.21628 84.1175 0.013151 t 0 0 0 0 0 0 0 0 0 0 0 0 5.277 0.0120424 0.0120424 0.0120424 0.0120424 2.45002 6.58864

M08279_2.00_shift5 (ZNF37A)
; oligos_7nt_mkv5_m4 versus M08279_2.00 (ZNF37A); m=164/165; ncol2=9; w=-2; offset=-2; strand=D; shift=5; score=0.403453; -----yyyyyyTCC----- ; cor=; Ncor= a 0 0 0 0 0 12.1211 0.923434 4.1502 4.47036 2.2778 0.665369 1.1815 0.0852402 1.43956 0 0 0 0 0 c 0 0 0 0 0 40.8967 65.9349 38.7955 55.0712 58.2745 63.8721 0.0852402 99.7443 98.39 0 0 0 0 0 g 0 0 0 0 0 18.5164 0.0852402 2.79393 14.6661 3.82683 0.0852402 0.0852402 0.0852402 0.0852402 0 0 0 0 0 t 0 0 0 0 0 28.4658 33.0565 54.2603 25.7923 35.6209 35.3773 98.648 0.0852402 0.0852402 0 0 0 0 0

M04489_2.00_shift6 (KLF10)
; oligos_7nt_mkv5_m4 versus M04489_2.00 (KLF10); m=165/165; ncol2=22; w=-1; offset=-1; strand=D; shift=6; score=0.401696; ------gmCACrCCCmygm ; cor=; Ncor= a 0 0 0 0 0 0 21.0765 30.2063 3.03816 84.6814 1.17213 66.5517 0.0050005 0 0 33.9544 4.42738 13.9385 31.0165 c 0 0 0 0 0 0 10.8136 57.6256 94.1637 7.51027 98.0399 0.0542032 99.985 100 89.7491 51.3163 62.1824 15.964 47.9859 g 0 0 0 0 0 0 62.5544 5.91557 0.470362 7.78124 0.0147747 30.7184 0.010001 0 0 2.64165 3.64998 58.3646 5.69375 t 0 0 0 0 0 0 5.55556 6.25256 2.32781 0.0270966 0.773209 2.67567 0 0 10.2509 12.0877 29.7402 11.7329 15.3038

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv5_m3_shift5 ; 242 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv5_m3_shift5 (oligos_7nt_mkv5_m3)
; oligos_7nt_mkv5_m3; m=0 (reference); ncol1=11; shift=5; ncol=16; -----wtATTTTTAww ; Alignment reference a 0 0 0 0 0 6128 5376 17701 1060 1433 672 1169 1446 17563 6843 7102 c 0 0 0 0 0 3509 5122 1136 776 461 394 651 977 1147 3654 3601 g 0 0 0 0 0 4469 3873 1162 808 801 418 730 773 1002 3673 3889 t 0 0 0 0 0 7500 7235 1607 18962 18911 20122 19056 18410 1894 7436 7014

M09597_2.00_rc_shift4 (BORCS8-MEF2B,MEF2C_rc)
; oligos_7nt_mkv5_m3 versus M09597_2.00_rc (BORCS8-MEF2B,MEF2C_rc); m=1/241; ncol2=12; w=-1; offset=-1; strand=R; shift=4; score=0.722452; ----kCTATTTttrgh ; cor=; Ncor= a 0 0 0 0 10.8 5 0.5 92.9 9.3 9.9 6.4 20.2 16.2 53.8 14.6 30.5 c 0 0 0 0 10 69.3 5.8 1.1 0.7 2.4 4.3 17.5 7.8 0.1 6.5 33.7 g 0 0 0 0 43.9 6.2 0.2 3 1 0.6 0.6 3.3 11.9 44.4 60 9.9 t 0 0 0 0 35.2 19.5 93.5 3 89 87.1 88.7 59 64.1 1.7 18.9 25.9

M03340_2.00_rc_shift4 (BORCS8-MEF2B,MEF2A_rc)
; oligos_7nt_mkv5_m3 versus M03340_2.00_rc (BORCS8-MEF2B,MEF2A_rc); m=2/241; ncol2=12; w=-1; offset=-1; strand=R; shift=4; score=0.70964; ----kCTATTTwTAGm ; cor=; Ncor= a 0 0 0 0 8.58175 1.04076 0.102669 99.7945 3.84615 4.99022 13.7411 46.6598 0.408998 99.0816 4.73978 40.556 c 0 0 0 0 3.7037 84.2151 0 0 0 0 0 0.20555 0 0 0.27881 38.8389 g 0 0 0 0 33.243 0.433651 0.205339 0.20555 0.394477 0 0.177305 0 0.306748 0.918367 90.2416 7.03189 t 0 0 0 0 54.4715 14.3105 99.692 0 95.7594 95.0098 86.0816 53.1346 99.2843 0 4.73978 13.5732

M02745_2.00_rc_shift5 (BORCS8-MEF2B,MEF2C_rc)
; oligos_7nt_mkv5_m3 versus M02745_2.00_rc (BORCS8-MEF2B,MEF2C_rc); m=3/241; ncol2=12; w=0; offset=0; strand=R; shift=5; score=0.707547; -----CTATTTwTAGt ; cor=; Ncor= a 0 0 0 0 0 0.447761 0.0501002 99.7492 0.0501505 3.06271 2.30505 36.9846 0.150225 99.7492 0.0501505 24.8523 c 0 0 0 0 0 98.9552 0.0501002 0.200602 0.150451 0.0486145 0.147131 0.283286 0.2003 0.100301 0.100301 12.4106 g 0 0 0 0 0 0.149254 0.250501 0.0501505 0.0501505 0.194458 0 0.125905 0.0500751 0.0501505 99.7492 0.870918 t 0 0 0 0 0 0.447761 99.6493 0 99.7492 96.6942 97.5478 62.6062 99.5994 0.100301 0.100301 61.8663

M09248_2.00_rc_shift3 (BORCS8-MEF2B,MEF2C_rc)
; oligos_7nt_mkv5_m3 versus M09248_2.00_rc (BORCS8-MEF2B,MEF2C_rc); m=4/241; ncol2=13; w=-2; offset=-2; strand=R; shift=3; score=0.689004; ---dkCTATTTTTrgm ; cor=; Ncor= a 0 0 0 29.8 10.4 3 0.2 94.8 6 8 2.4 14.8 13.8 56.6 15.4 36 c 0 0 0 7.4 9.2 69.2 6.2 1.6 0.6 1.2 3.8 9 4.2 0.4 7.2 36.4 g 0 0 0 28.4 42 4.6 0 0.6 0.2 0.6 1 2.2 12.2 42.2 63.4 10.2 t 0 0 0 34.4 38.4 23.2 93.6 3 93.2 90.2 92.8 74 69.8 0.8 14 17.4

M03343_2.00_rc_shift4 (BORCS8-MEF2B,MEF2D_rc)
; oligos_7nt_mkv5_m3 versus M03343_2.00_rc (BORCS8-MEF2B,MEF2D_rc); m=5/241; ncol2=12; w=-1; offset=-1; strand=R; shift=4; score= 0.6867; ----kCTATTTwTAGh ; cor=; Ncor= a 0 0 0 0 9.05713 0.0811162 0 100 1.17447 3.60345 11.8147 52.0413 0.103111 99.571 0.900748 28.2908 c 0 0 0 0 1.08376 94.1434 0.0688824 0 0.0170213 0.0332116 0 0.0344531 0.0343702 0 0 33.3046 g 0 0 0 0 40.2229 0.275795 0 0 0.0340426 0 0.0607441 0 0.137481 0.377488 98.6234 1.87802 t 0 0 0 0 49.6362 5.49968 99.9311 0 98.7745 96.3633 88.1245 47.9242 99.725 0.0514756 0.475867 36.5265

M09247_2.00_rc_shift3 (BORCS8-MEF2B,MEF2A_rc)
; oligos_7nt_mkv5_m3 versus M09247_2.00_rc (BORCS8-MEF2B,MEF2A_rc); m=6/241; ncol2=13; w=-2; offset=-2; strand=R; shift=3; score=0.681144; ---wkCTATTTTTrgm ; cor=; Ncor= a 0 0 0 27.4 12.8 2.8 0.2 92.8 6.4 10.2 1.4 13.4 14 55 16 36 c 0 0 0 7.8 8 72.4 5.6 0.6 0.2 0.2 4.8 8.2 3.6 0.2 3.8 38.4 g 0 0 0 24.4 38.8 5 0 0.8 0.8 0.4 1 1.2 11.6 43.6 65.8 10.4 t 0 0 0 40.4 40.4 19.8 94.2 5.8 92.6 89.2 92.8 77.2 70.8 1.2 14.4 15.2

M03344_2.00_rc_shift4 (BORCS8-MEF2B,MEF2B_rc)
; oligos_7nt_mkv5_m3 versus M03344_2.00_rc (BORCS8-MEF2B,MEF2B_rc); m=7/241; ncol2=12; w=-1; offset=-1; strand=R; shift=4; score=0.668087; ----kCTATTTwTAGy ; cor=; Ncor= a 0 0 0 0 13.4718 0.0917431 0.0949968 100 1.40845 4.33596 18.3368 52.5063 0.473934 99.2126 0.377358 13.5461 c 0 0 0 0 2.63578 96.3303 0.0633312 0 0 0.0606428 0.309917 0 0 0 0 47.3712 g 0 0 0 0 56.9223 0.58104 0.0949968 0 0 0.0909642 0 0.0634518 0 0.787402 99.0566 1.93133 t 0 0 0 0 26.9702 2.99694 99.7467 0 98.5915 95.5124 81.3533 47.4302 99.5261 0 0.566038 37.1513

M03581_2.00_rc_shift8 (CPEB1_rc)
; oligos_7nt_mkv5_m3 versus M03581_2.00_rc (CPEB1_rc); m=8/241; ncol2=8; w=0; offset=3; strand=R; shift=8; score=0.662299; --------tTTTTATt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 14.3967 0 2.75678 4.47653 0.58627 99.0098 2.18391 17.3424 c 0 0 0 0 0 0 0 0 24.9787 0.58003 3.30422 0.599947 1.26116 0.433228 13.7299 24.9502 g 0 0 0 0 0 0 0 0 9.00192 0 0.104275 0 0 0 1.33908 5.13649 t 0 0 0 0 0 0 0 0 51.6227 99.42 93.8347 94.9235 98.1526 0.557007 82.7471 52.5709

M00710_2.00_rc_shift5 (SOX1_rc)
; oligos_7nt_mkv5_m3 versus M00710_2.00_rc (SOX1_rc); m=9/241; ncol2=10; w=0; offset=0; strand=R; shift=5; score= 0.6599; -----ctATTGTTyw- ; cor=; Ncor= a 0 0 0 0 0 15.0773 18.7572 99.9567 0.0144469 0.0144469 10.291 0.0144469 10.291 20.8429 25.1536 0 c 0 0 0 0 0 37.1677 10.1374 0.0144469 0.0144469 0.0144469 0.0144469 0.0144469 0.0144469 28.9058 14.8771 0 g 0 0 0 0 0 23.7286 10.1374 0.0144469 0.0144469 0.0144469 80.731 8.96351 0.0144469 20.418 14.8771 0 t 0 0 0 0 0 24.0264 60.968 0.0144469 99.9567 99.9567 8.96351 91.0076 89.6801 29.8333 45.0923 0

M08090_2.00_shift5 (ZNF384)
; oligos_7nt_mkv5_m3 versus M08090_2.00 (ZNF384); m=10/241; ncol2=12; w=0; offset=0; strand=D; shift=5; score=0.659684; -----ttTTTTTTkww ; cor=; Ncor= a 0 0 0 0 0 15.2992 14.5763 0.069004 0.627608 0.502744 1.03177 0.61775 0.193868 16.0878 41.984 30.0956 c 0 0 0 0 0 9.52256 9.0921 0 0.0460027 0.0492886 0.0854336 0.0624322 0.0427168 15.5128 15.3715 16.8666 g 0 0 0 0 0 13.022 9.55542 0.0197154 0.0854336 0.0427168 0.069004 0.115007 0.0230013 25.2719 11.3561 23.0835 t 0 0 0 0 0 62.1562 66.7762 99.9113 99.241 99.4053 98.8138 99.2048 99.7404 43.1275 31.2884 29.9543

M01104_2.00_rc_shift6 (M01104_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01104_2.00_rc; m=11/241; ncol2=10; w=0; offset=1; strand=R; shift=6; score=0.658466; ------dwwTwwtttw ; cor=; Ncor= a 0 0 0 0 0 0 32.5326 67.4102 39.3945 20.2484 37.3711 42.1174 22.608 23.1727 22.404 34.642 c 0 0 0 0 0 0 10.7214 2.88867 0.0397012 0.0336438 7.69751 12.3106 22.608 17.5135 22.6292 17.0315 g 0 0 0 0 0 0 26.108 0.0115716 0.00624251 0.0336438 4.48571 8.58882 10.1584 19.9449 19.4771 20.8023 t 0 0 0 0 0 0 30.638 29.6896 60.5595 79.6844 50.4457 36.9831 44.6255 39.3688 35.4896 27.5242

M11309_2.00_rc_shift5 (SOX1,SOX5_rc)
; oligos_7nt_mkv5_m3 versus M11309_2.00_rc (SOX1,SOX5_rc); m=12/241; ncol2=10; w=0; offset=0; strand=R; shift=5; score=0.65292; -----syATTGTTwr- ; cor=; Ncor= a 0 0 0 0 0 21.7391 17.3913 100 0 0 4.34783 0 4.34783 36.3636 40.9091 0 c 0 0 0 0 0 26.087 26.087 0 0 0 0 4.34783 4.34783 13.6364 13.6364 0 g 0 0 0 0 0 30.4348 13.0435 0 4.34783 0 95.6522 0 0 18.1818 27.2727 0 t 0 0 0 0 0 21.7391 43.4783 0 95.6522 100 0 95.6522 91.3043 31.8182 18.1818 0

M09255_2.00_rc_shift3 (BORCS8-MEF2B_rc)
; oligos_7nt_mkv5_m3 versus M09255_2.00_rc (BORCS8-MEF2B_rc); m=13/241; ncol2=14; w=-2; offset=-2; strand=R; shift=3; score=0.639599; ---wkCTATTTtTrgm ; cor=; Ncor= a 0 0 0 28.9738 12.2736 5.03018 1.60966 90.7445 7.64588 5.6338 5.6338 17.505 14.8893 61.3682 13.6821 31.992 c 0 0 0 8.04829 8.2495 68.2093 7.84708 1.40845 2.01207 1.60966 5.6338 12.4748 2.8169 1.20724 5.03018 40.2414 g 0 0 0 22.5352 38.2294 5.4326 0.804829 3.42052 1.20724 1.40845 2.01207 2.61569 8.4507 35.4125 67.2032 11.2676 t 0 0 0 40.4427 41.2475 21.328 89.7384 4.42656 89.1348 91.3481 86.7203 67.4044 73.8431 2.01207 14.0845 16.499

M05866_2.00_rc_shift5 (FOXP2,FOXP4_rc)
; oligos_7nt_mkv5_m3 versus M05866_2.00_rc (FOXP2,FOXP4_rc); m=14/241; ncol2=10; w=0; offset=0; strand=R; shift=5; score=0.637251; -----wttTrTTTAy- ; cor=; Ncor= a 0 0 0 0 0 34.2 24.7 23.7 4 31.6 4 5.6 4.3 77.9 7.9 0 c 0 0 0 0 0 13.7 20.4 10.1 1.7 0.9 2.2 1.7 0.9 1.6 52.7 0 g 0 0 0 0 0 18.8 23.2 9.8 4.6 65 2.9 9.3 16.3 6.5 5.6 0 t 0 0 0 0 0 33.3 31.7 56.5 89.6 2.5 90.9 83.4 78.5 14 33.8 0

M00254_2.00_rc_shift6 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M00254_2.00_rc (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXS1_rc); m=15/241; ncol2=10; w=0; offset=1; strand=R; shift=6; score=0.636898; ------gtTGTTTAyt ; cor=; Ncor= a 0 0 0 0 0 0 22.729 24.1129 0.0230777 8.94953 0.0230777 20.2765 0.0230777 88.2878 13.937 12.3807 c 0 0 0 0 0 0 22.729 22.9966 0.0230777 0.0230777 0.0230777 0.0230777 0.0230777 0.0230777 32.4128 21.051 g 0 0 0 0 0 0 31.8131 21.2529 0.0230777 91.0043 0.0230777 0.0230777 0.0230777 0.0230777 2.2941 12.3807 t 0 0 0 0 0 0 22.729 31.6376 99.9308 0.0230777 99.9308 79.6773 99.9308 11.666 51.3561 54.1876

M02532_2.00_rc_shift4 (LIN54_rc)
; oligos_7nt_mkv5_m3 versus M02532_2.00_rc (LIN54_rc); m=16/241; ncol2=13; w=-1; offset=-1; strand=R; shift=4; score=0.628589; ----maaAATTTwaaw ; cor=; Ncor= a 0 0 0 0 29.4886 27.1117 67.8023 77.7623 82.095 0 0 0 26.2905 62.6998 57.1704 38.6975 c 0 0 0 0 29.4886 24.0964 10.7326 7.41257 3.23238 0.00909916 0.00909916 0.00909916 12.7056 9.59039 14.2765 17.5965 g 0 0 0 0 20.5114 24.396 10.7326 7.41257 3.23238 0.00909916 0.00909916 8.21699 13.1754 18.1194 14.2765 17.5965 t 0 0 0 0 20.5114 24.396 10.7326 7.41257 11.4403 99.9727 99.9727 91.7648 47.8285 9.59039 14.2765 26.1094

M09252_2.00_rc_shift3 (BORCS8-MEF2B_rc)
; oligos_7nt_mkv5_m3 versus M09252_2.00_rc (BORCS8-MEF2B_rc); m=17/241; ncol2=14; w=-2; offset=-2; strand=R; shift=3; score= 0.621; ---dkCTATTTwTAGm ; cor=; Ncor= a 0 0 0 29.4 7.2 2.6 0.2 96.2 5.8 8 9 29.6 7.6 76.4 8.6 30.2 c 0 0 0 6 7.4 75.4 2.4 0 0.4 2.2 3.2 9 1 0 3.4 47.4 g 0 0 0 30.2 48.8 6 0.6 0.4 0.4 0.8 0.6 1.4 5 22.4 78.8 6.4 t 0 0 0 34.4 36.6 16 96.8 3.4 93.4 89 87.2 60 86.4 1.2 9.2 16

M09250_2.00_rc_shift3 (BORCS8-MEF2B,MEF2D_rc)
; oligos_7nt_mkv5_m3 versus M09250_2.00_rc (BORCS8-MEF2B,MEF2D_rc); m=18/241; ncol2=12; w=-2; offset=-2; strand=R; shift=3; score=0.615402; ---dkCTATTTwTAG- ; cor=; Ncor= a 0 0 0 31.2 6.8 2.4 0.2 97 5.4 8 9.4 29.8 8.6 75.4 9.4 0 c 0 0 0 5.6 6.4 75.8 2 0.2 0.6 1.2 4 8.6 1.4 0 3.2 0 g 0 0 0 30.2 50 6 0.6 0.2 0.4 0.8 0.6 1.2 5.4 23.6 78.6 0 t 0 0 0 33 36.8 15.8 97.2 2.6 93.6 90 86 60.4 84.6 1 8.8 0

M07439_2.00_rc_shift4 (M07439_2.00_rc)
; oligos_7nt_mkv5_m3 versus M07439_2.00_rc; m=19/241; ncol2=9; w=-1; offset=-1; strand=R; shift=4; score=0.599245; ----awwATTTwt--- ; cor=; Ncor= a 0 0 0 0 50 52 62 100 0 8 24 28.2828 15 0 0 0 c 0 0 0 0 14 8 2 0 0 0 0 5.05051 15 0 0 0 g 0 0 0 0 14 8 2 0 0 0 0 5.05051 11 0 0 0 t 0 0 0 0 22 32 34 0 100 92 76 61.6162 59 0 0 0

M08479_2.00_rc_shift4 (M08479_2.00_rc)
; oligos_7nt_mkv5_m3 versus M08479_2.00_rc; m=20/241; ncol2=9; w=-1; offset=-1; strand=R; shift=4; score=0.598513; ----awwATTTwt--- ; cor=; Ncor= a 0 0 0 0 50 52 62 100 0 8 24 29 15 0 0 0 c 0 0 0 0 14 8 2 0 0 0 0 5 15 0 0 0 g 0 0 0 0 14 8 2 0 0 0 0 5 11 0 0 0 t 0 0 0 0 22 32 34 0 100 92 76 61 59 0 0 0

M08149_2.00_rc_shift3 (BORCS8-MEF2B,MEF2C_rc)
; oligos_7nt_mkv5_m3 versus M08149_2.00_rc (BORCS8-MEF2B,MEF2C_rc); m=21/241; ncol2=15; w=-2; offset=-2; strand=R; shift=3; score=0.592283; ---wkCTATTTTTrgm ; cor=; Ncor= a 0 0 0 28.2481 11.3173 1.31281 0 94.6582 3.16885 3.44047 0.67904 10.412 11.9058 55.4097 15.2558 34.4047 c 0 0 0 5.70394 6.69986 75.6451 1.44862 0 0.181077 0.0905387 3.93843 10.9099 3.34993 0 3.53101 37.2114 g 0 0 0 20.3712 37.8452 5.43232 0 2.8067 0 0 0 1.44862 11.589 44.5903 63.9203 8.87279 t 0 0 0 45.6768 44.1376 17.6098 98.5514 2.53508 96.6501 96.469 95.3825 77.2295 73.1553 0 17.2929 19.5111

M10935_2.00_rc_shift1 (BORCS8-MEF2B,MEF2A_rc)
; oligos_7nt_mkv5_m3 versus M10935_2.00_rc (BORCS8-MEF2B,MEF2A_rc); m=22/241; ncol2=16; w=-4; offset=-4; strand=R; shift=1; score=0.586438; -rGrGTTATTTTTAGA ; cor=; Ncor= a 0 60 20 60 0 0 0 100 0 0 0 0 0 100 20 80 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 g 0 40 80 40 100 0 0 0 0 0 0 0 0 0 80 0 t 0 0 0 0 0 100 100 0 100 100 100 100 100 0 0 0

M10576_2.00_rc_shift4 (M10576_2.00_rc)
; oligos_7nt_mkv5_m3 versus M10576_2.00_rc; m=23/241; ncol2=14; w=-1; offset=-1; strand=R; shift=4; score=0.584315; ----yswwTGTTTATw ; cor=; Ncor= a 0 0 0 0 16.6667 16.6667 33.3333 50 0 16.6667 0 0 0 100 0 66.6667 c 0 0 0 0 33.3333 33.3333 16.6667 16.6667 0 0 0 0 0 0 16.6667 0 g 0 0 0 0 0 33.3333 16.6667 0 0 83.3333 0 0 0 0 0 0 t 0 0 0 0 50 16.6667 33.3333 33.3333 100 0 100 100 100 0 83.3333 33.3333

M09253_2.00_rc_shift2 (BORCS8-MEF2B_rc)
; oligos_7nt_mkv5_m3 versus M09253_2.00_rc (BORCS8-MEF2B_rc); m=24/241; ncol2=15; w=-3; offset=-3; strand=R; shift=2; score=0.582072; --ktkCTATTTTTrgm ; cor=; Ncor= a 0 0 17.4242 22.3485 10.9848 2.27273 0 91.2879 13.2576 10.6061 3.0303 16.2879 10.9848 57.9545 15.5303 30.303 c 0 0 14.0152 10.6061 7.57576 76.8939 5.30303 0.378788 1.89394 4.16667 4.54545 6.81818 5.30303 0 2.27273 44.697 g 0 0 34.4697 24.6212 36.7424 5.68182 1.13636 1.51515 0.757576 0 0.378788 2.65152 8.33333 40.5303 65.1515 12.1212 t 0 0 34.0909 42.4242 44.697 15.1515 93.5606 6.81818 84.0909 85.2273 92.0455 74.2424 75.3788 1.51515 17.0455 12.8788

M07979_2.00_rc_shift3 (BORCS8-MEF2B,MEF2A_rc)
; oligos_7nt_mkv5_m3 versus M07979_2.00_rc (BORCS8-MEF2B,MEF2A_rc); m=25/241; ncol2=15; w=-2; offset=-2; strand=R; shift=3; score=0.580938; ---dkCTATTTTTrgm ; cor=; Ncor= a 0 0 0 27.9736 13.8767 3.5242 0 96.696 7.489 8.8106 1.7621 16.0793 13.4361 49.3392 15.1982 35.2423 c 0 0 0 7.04849 9.03079 70.2644 4.185 0 0 0.2203 4.4053 11.4537 2.4229 0 5.7269 38.5463 g 0 0 0 26.2115 35.4626 5.28631 0 0 0 0.4405 0 1.9824 12.9956 50.6608 64.0969 10.1322 t 0 0 0 38.7665 41.63 20.9251 95.815 3.304 92.511 90.5286 93.8326 70.4846 71.1454 0 14.978 16.0793

M01105_2.00_rc_shift7 (M01105_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01105_2.00_rc; m=26/241; ncol2=9; w=0; offset=2; strand=R; shift=7; score=0.579301; -------wwwwwyttw ; cor=; Ncor= a 0 0 0 0 0 0 0 46.6117 38.6247 26.005 27.5772 37.0206 24.1521 22.7241 21.5916 26.6444 c 0 0 0 0 0 0 0 10.6106 5.95298 4.47402 14.9841 15.0515 25.3904 19.3642 21.5916 18.5892 g 0 0 0 0 0 0 0 9.60085 4.82539 9.28396 0.213737 17.3133 10.6374 21.1878 23.625 17.3324 t 0 0 0 0 0 0 0 33.1768 50.597 60.2371 57.2249 30.6146 39.8201 36.7239 33.1918 37.434

M07980_2.00_rc_shift3 (BORCS8-MEF2B,MEF2C_rc)
; oligos_7nt_mkv5_m3 versus M07980_2.00_rc (BORCS8-MEF2B,MEF2C_rc); m=27/241; ncol2=15; w=-2; offset=-2; strand=R; shift=3; score=0.570556; ---wkCTATTTTTrgm ; cor=; Ncor= a 0 0 0 30.9426 14.1393 2.8689 0 95.9017 10.041 10.2459 2.0492 13.5246 12.7049 46.5164 15.9836 35.041 c 0 0 0 7.1721 8.6066 74.5901 6.1475 0.4098 1.0246 0.2049 4.918 12.9098 3.6885 0.4098 4.918 38.7295 g 0 0 0 23.5656 39.1393 5.32789 0 0 0 0.2049 0 1.6393 14.5492 53.0738 64.7541 12.2951 t 0 0 0 38.3197 38.1148 17.2131 93.8525 3.6885 88.9344 89.3443 93.0328 71.9263 69.0574 0 14.3443 13.9344

M01679_2.00_rc_shift5 (M01679_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01679_2.00_rc; m=28/241; ncol2=8; w=0; offset=0; strand=R; shift=5; score=0.566835; -----ATwTwTWW--- ; cor=; Ncor= a 0 0 0 0 0 93.6642 10.8261 67.5216 13.5259 35.1242 24.3251 27.7747 27.5826 0 0 0 c 0 0 0 0 0 0.031211 0.0269978 0.0269978 0.0269978 0.0269978 0.0269978 0.0277469 0.0344353 0 0 0 g 0 0 0 0 0 0.031211 0.0269978 0.0269978 0.0269978 0.0269978 0.0269978 0.0277469 0.0344353 0 0 0 t 0 0 0 0 0 6.27341 89.1199 32.4244 86.4201 64.8218 75.621 72.1698 72.3485 0 0 0

M09433_2.00_rc_shift7 (TBPL2_rc)
; oligos_7nt_mkv5_m3 versus M09433_2.00_rc (TBPL2_rc); m=29/241; ncol2=10; w=0; offset=2; strand=R; shift=7; score=0.565895; -------syTTTTATA ; cor=; Ncor= a 0 0 0 0 0 0 0 8.6 3.6 16 0.4 12 2 81.8 19.2 70.4 c 0 0 0 0 0 0 0 43 53.8 7.2 5 1 3.6 10.2 2.4 4.8 g 0 0 0 0 0 0 0 37 1.8 0.6 0 1.8 3 4.4 1.6 11.4 t 0 0 0 0 0 0 0 11.4 40.8 76.2 94.6 85.2 91.4 3.6 76.8 13.4

M10804_2.00_rc_shift4 (NANOGP8,NKX1-1,NKX1-2_rc)
; oligos_7nt_mkv5_m3 versus M10804_2.00_rc (NANOGP8,NKX1-1,NKX1-2_rc); m=30/241; ncol2=14; w=-1; offset=-1; strand=R; shift=4; score=0.56446; ----rywwTrTTTAyw ; cor=; Ncor= a 0 0 0 0 33.3333 16.6667 50 33.3333 0 66.6667 0 0 0 100 0 50 c 0 0 0 0 16.6667 50 16.6667 0 0 0 0 0 0 0 66.6667 0 g 0 0 0 0 50 0 0 16.6667 0 33.3333 0 0 0 0 0 16.6667 t 0 0 0 0 0 33.3333 33.3333 50 100 0 100 100 100 0 33.3333 33.3333

M06203_2.00_rc_shift5 (FOXP4_rc)
; oligos_7nt_mkv5_m3 versus M06203_2.00_rc (FOXP4_rc); m=31/241; ncol2=15; w=0; offset=0; strand=R; shift=5; score=0.56264; -----kswTTTTTTyt ; cor=; Ncor= a 0 0 0 0 0 16.9406 15.5729 44.4812 0 0 0 0 0.441501 2.98013 12.9139 21.7439 c 0 0 0 0 0 15.4235 34.2603 3.31126 0.331126 0 0.883002 0 0 0.993377 31.7881 15.011 g 0 0 0 0 0 38.4324 37.3749 7.28477 0.993377 0 0 0 0 0 5.96026 21.0817 t 0 0 0 0 0 29.2035 12.792 44.9227 98.6755 100 99.117 100 99.5585 96.0265 49.3377 42.1634

M07299_2.00_rc_shift2 (LIN54_rc)
; oligos_7nt_mkv5_m3 versus M07299_2.00_rc (LIN54_rc); m=32/241; ncol2=15; w=-3; offset=-3; strand=R; shift=2; score=0.55767; --TTTRAATTTtwAww ; cor=; Ncor= a 0 0 0 0 1.8939 73.8636 100 95.8333 7.5758 5.6818 0.3788 14.0152 47.3485 73.8636 65.9091 49.2424 c 0 0 0 0 17.0455 0 0 1.1364 0 6.0606 13.2576 15.5303 5.6818 3.4091 3.0303 10.6061 g 0 0 0 0 0 26.1364 0 3.0303 0 0.3788 0 9.8485 14.3939 2.2727 4.1667 3.4091 t 0 0 100 100 81.0606 0 0 0 92.4242 87.8788 86.3636 60.6061 32.5758 20.4545 26.8939 36.7424

M01984_2.00_rc_shift6 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M01984_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc); m=33/241; ncol2=12; w=0; offset=1; strand=R; shift=6; score=0.557614; ------twTGTTTAya ; cor=; Ncor= a 0 0 0 0 0 0 20.2173 31.9997 4.83711 11.8195 0.0220583 0.0220583 0.0220583 81.6007 4.80478 52.8646 c 0 0 0 0 0 0 20.2173 12.7443 4.83711 2.50251 0.0220583 0.0220583 0.0220583 0.0220583 47.1109 22.5799 g 0 0 0 0 0 0 20.2173 23.3808 4.83711 83.1754 0.0220583 0.0220583 10.2206 9.03814 4.80478 12.2778 t 0 0 0 0 0 0 39.3482 31.8752 85.4887 2.50251 99.9338 99.9338 89.7353 9.3391 43.2796 12.2778

M01103_2.00_rc_shift6 (M01103_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01103_2.00_rc; m=34/241; ncol2=12; w=0; offset=1; strand=R; shift=6; score=0.555073; ------wATTwATwTw ; cor=; Ncor= a 0 0 0 0 0 0 37.448 79.0879 2.1966 2.1966 56.8025 82.2016 19.2951 66.5982 9.97341 26.7864 c 0 0 0 0 0 0 15.0363 6.97071 2.1966 2.1966 0.00975078 0.00975078 0.00975078 0.00975078 9.97341 18.039 g 0 0 0 0 0 0 15.0363 6.97071 2.1966 2.1966 0.00975078 0.00975078 0.00975078 0.00975078 9.97341 18.039 t 0 0 0 0 0 0 32.4794 6.97071 93.4102 93.4102 43.178 17.7789 80.6854 33.3823 70.0798 37.1355

M07298_2.00_rc_shift1 (LIN54_rc)
; oligos_7nt_mkv5_m3 versus M07298_2.00_rc (LIN54_rc); m=35/241; ncol2=15; w=-4; offset=-4; strand=R; shift=1; score=0.547132; -wTTTRAATTTTwwAw ; cor=; Ncor= a 0 52.6667 0 0 0 71.8333 100 100 15.5 10.8333 2.3333 5.8333 44.3333 64.8333 80.5 60.6667 c 0 0 0.1667 0 19.6667 0 0 0 3.8333 11 7.1667 11.6667 7.6667 1.1667 1 4.5 g 0 2.6667 0 7.5 0 28.1667 0 0 0 0.5 0 9 11.5 6.1667 2.6667 2.8333 t 0 44.6667 99.8333 92.5 80.3333 0 0 0 80.6667 77.6667 90.5 73.5 36.5 27.8333 15.8333 32

M06197_2.00_rc_shift8 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M06197_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc); m=36/241; ncol2=8; w=0; offset=3; strand=R; shift=8; score=0.546024; --------TGTTTaba ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 15 0 0 0 65 10 65 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 20 g 0 0 0 0 0 0 0 0 0 85 0 5 0 15 25 0 t 0 0 0 0 0 0 0 0 100 0 100 95 100 20 35 15

M07295_2.00_rc_shift1 (LIN54_rc)
; oligos_7nt_mkv5_m3 versus M07295_2.00_rc (LIN54_rc); m=37/241; ncol2=15; w=-4; offset=-4; strand=R; shift=1; score=0.542949; -wTTTrAATwTTtwAW ; cor=; Ncor= a 0 39.531 0 0 0 67.5042 100 100 15.2429 25.4606 1.34 8.5427 23.2831 38.861 71.1893 68.5092 c 0 0 0 0 13.7353 0 0 0 2.6801 16.0804 5.0251 3.0151 7.5377 2.6801 1.34 3.1826 g 0 5.5276 0 14.2379 0 32.4958 0 0 0 2.1776 0 10.8878 8.2077 18.7605 3.3501 2.0101 t 0 54.9414 100 85.7621 86.2647 0 0 0 82.0771 56.2814 93.6348 77.5544 60.9715 39.6985 24.1206 26.2982

M11390_2.00_rc_shift6 (TBP,TBPL2_rc)
; oligos_7nt_mkv5_m3 versus M11390_2.00_rc (TBP,TBPL2_rc); m=38/241; ncol2=8; w=0; offset=1; strand=R; shift=6; score=0.541721; ------wATTTATa-- ; cor=; Ncor= a 0 0 0 0 0 0 38.2979 74.4681 4.25532 0 0 100 14.8936 65.9574 0 0 c 0 0 0 0 0 0 8.51064 12.766 8.51064 0 0 0 12.766 19.1489 0 0 g 0 0 0 0 0 0 8.51064 6.38298 2.12766 0 0 0 0 8.51064 0 0 t 0 0 0 0 0 0 44.6809 6.38298 85.1064 100 100 0 72.3404 6.38298 0 0

M00829_2.00_rc_shift6 (SOX1_rc)
; oligos_7nt_mkv5_m3 versus M00829_2.00_rc (SOX1_rc); m=39/241; ncol2=8; w=0; offset=1; strand=R; shift=6; score=0.538325; ------yATTGTTw-- ; cor=; Ncor= a 0 0 0 0 0 0 20 91.4286 2.85714 2.85714 5.71429 2.85714 12.9032 43.4783 0 0 c 0 0 0 0 0 0 36 2.85714 2.85714 2.85714 2.85714 2.85714 3.22581 13.0435 0 0 g 0 0 0 0 0 0 12 2.85714 2.85714 2.85714 88.5714 2.85714 3.22581 17.3913 0 0 t 0 0 0 0 0 0 32 2.85714 91.4286 91.4286 2.85714 91.4286 80.6452 26.087 0 0

M08236_2.00_shift5 (MZF1)
; oligos_7nt_mkv5_m3 versus M08236_2.00 (MZF1); m=40/241; ncol2=7; w=0; offset=0; strand=D; shift=5; score=0.53753; -----CCATTTT---- ; cor=; Ncor= a 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 c 0 0 0 0 0 75.4902 100 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 24.5098 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 100 100 100 100 0 0 0 0

M01108_2.00_rc_shift7 (M01108_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01108_2.00_rc; m=41/241; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.537032; -------wwTwwttw- ; cor=; Ncor= a 0 0 0 0 0 0 0 58.5557 42.6266 10.0325 37.2223 41.4883 24.5293 17.1695 25.169 0 c 0 0 0 0 0 0 0 6.68575 3.82852 1.85119 1.98756 4.83273 11.0217 18.4144 19.9976 0 g 0 0 0 0 0 0 0 6.82081 1.48065 2.84576 2.99489 3.50928 5.31146 10.731 12.4985 0 t 0 0 0 0 0 0 0 27.9377 52.0642 85.2706 57.7953 50.1697 59.1376 53.6851 42.3349 0

M00300_2.00_shift9 (HOXD13)
; oligos_7nt_mkv5_m3 versus M00300_2.00 (HOXD13); m=42/241; ncol2=8; w=0; offset=4; strand=D; shift=9; score=0.534973; ---------tTTTATt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 20.7937 5.56096 5.19995 14.2885 97.3838 10.4613 18.2501 c 0 0 0 0 0 0 0 0 0 7.92755 1.39545 0.00649182 0.655674 0.00649182 16.3421 0.00729714 g 0 0 0 0 0 0 0 0 0 11.8864 1.39545 0.00649182 0.00649182 0.655674 0.659958 24.8176 t 0 0 0 0 0 0 0 0 0 59.3923 91.6482 94.7871 85.0493 1.95404 72.5366 56.925

M10571_2.00_rc_shift3 (FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M10571_2.00_rc (FOXS1_rc); m=43/241; ncol2=16; w=-2; offset=-2; strand=R; shift=3; score=0.532856; ---cmwwmTATTTAyt ; cor=; Ncor= a 0 0 0 8.33333 35.7143 26.6667 26.6667 60 0 80 0 0 0 100 0 8.33333 c 0 0 0 50 35.7143 20 13.3333 26.6667 0 0 0 0 0 0 33.3333 16.6667 g 0 0 0 16.6667 14.2857 20 20 6.66667 0 20 0 0 0 0 0 8.33333 t 0 0 0 25 14.2857 33.3333 40 6.66667 100 0 100 100 100 0 66.6667 66.6667

M01106_2.00_rc_shift7 (M01106_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01106_2.00_rc; m=44/241; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.532322; -------wwTwwwtt- ; cor=; Ncor= a 0 0 0 0 0 0 0 59.6983 38.2408 16.542 33.4392 37.6733 26.5279 14.1412 20.8888 0 c 0 0 0 0 0 0 0 0.203784 2.78404 3.37333 3.09481 6.95145 11.4524 16.7616 21.525 0 g 0 0 0 0 0 0 0 2.03258 0.774067 3.69101 3.7424 4.01064 5.86027 14.0005 9.20009 0 t 0 0 0 0 0 0 0 38.0653 58.2011 76.3937 59.7236 51.3647 56.1595 55.0968 48.3861 0

M09404_2.00_rc_shift6 (SOX1_rc)
; oligos_7nt_mkv5_m3 versus M09404_2.00_rc (SOX1_rc); m=45/241; ncol2=8; w=0; offset=1; strand=R; shift=6; score=0.531856; ------yATTGTTw-- ; cor=; Ncor= a 0 0 0 0 0 0 13.1209 87.4346 0 1.13089 4.38607 1.13089 5.51695 37.7783 0 0 c 0 0 0 0 0 0 31.2032 0 3.39266 1.13089 3.39266 5.26565 4.26041 15.6085 0 0 g 0 0 0 0 0 0 16.0109 5.78009 6.52219 0 89.9595 0 2.13612 13.0836 0 0 t 0 0 0 0 0 0 39.665 6.78532 90.0852 97.7382 2.26177 93.6035 88.0865 33.5297 0 0

M09390_2.00_rc_shift6 (SOX1,SOX5_rc)
; oligos_7nt_mkv5_m3 versus M09390_2.00_rc (SOX1,SOX5_rc); m=46/241; ncol2=8; w=0; offset=1; strand=R; shift=6; score=0.531856; ------yATTGTTw-- ; cor=; Ncor= a 0 0 0 0 0 0 13.1209 87.4346 0 1.13089 4.38607 1.13089 5.51695 37.7783 0 0 c 0 0 0 0 0 0 31.2032 0 3.39266 1.13089 3.39266 5.26565 4.26041 15.6085 0 0 g 0 0 0 0 0 0 16.0109 5.78009 6.52219 0 89.9595 0 2.13612 13.0836 0 0 t 0 0 0 0 0 0 39.665 6.78532 90.0852 97.7382 2.26177 93.6035 88.0865 33.5297 0 0

M02081_2.00_shift9 (M02081_2.00)
; oligos_7nt_mkv5_m3 versus M02081_2.00; m=47/241; ncol2=8; w=0; offset=4; strand=D; shift=9; score=0.530889; ---------wTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 25.9612 4.8667 5.10061 12.1052 96.797 13.3788 18.4416 c 0 0 0 0 0 0 0 0 0 4.81546 1.39545 1.27993 0.643148 0.0063678 9.55807 0.00709019 g 0 0 0 0 0 0 0 0 0 13.466 0.701194 0.0063678 0.0063678 1.27993 1.27993 25.5318 t 0 0 0 0 0 0 0 0 0 55.7574 93.0367 93.6131 87.2453 1.91671 75.7832 56.0196

M11389_2.00_rc_shift8 (TBP,TBPL2_rc)
; oligos_7nt_mkv5_m3 versus M11389_2.00_rc (TBP,TBPL2_rc); m=48/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.530213; --------yTTTTAWA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 14.7455 0 0 7.18563 0 100 27.0007 72.6253 c 0 0 0 0 0 0 0 0 45.7335 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 10.1796 0 0 0 0 0 0 24.9065 t 0 0 0 0 0 0 0 0 29.3413 100 100 92.8144 100 0 72.9993 2.46821

M03046_2.00_rc_shift7 (FOXI2,FOXI3,FOXJ3_rc)
; oligos_7nt_mkv5_m3 versus M03046_2.00_rc (FOXI2,FOXI3,FOXJ3_rc); m=49/241; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.530118; -------TTgTTTAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 12.7764 0 7.05374 5.32915 4.6549 2.29794 70.5341 0 0 c 0 0 0 0 0 0 0 7.55528 0.605536 14.3954 4.62382 2.16693 3.09033 11.6022 54.6562 0 g 0 0 0 0 0 0 0 9.09091 0 55.1344 0 0.963082 3.56577 4.91099 0 0 t 0 0 0 0 0 0 0 70.5774 99.3945 23.4165 90.047 92.2151 91.046 12.9527 45.3438 0

M09672_2.00_rc_shift7 (HOXC5,HOXC6_rc)
; oligos_7nt_mkv5_m3 versus M09672_2.00_rc (HOXC5,HOXC6_rc); m=50/241; ncol2=10; w=0; offset=2; strand=R; shift=7; score=0.528909; -------kgTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 14.881 17.2619 19.6429 2.97619 0 9.52381 100 0 7.14286 c 0 0 0 0 0 0 0 10.119 12.5 2.97619 0.595238 0 7.14286 0 14.2857 0 g 0 0 0 0 0 0 0 31.5476 50.5952 5.35714 7.7381 0 0 0 0 61.9048 t 0 0 0 0 0 0 0 43.4524 19.6429 72.0238 88.6905 100 83.3333 0 85.7143 30.9524

M03100_2.00_shift8 (HOXA13)
; oligos_7nt_mkv5_m3 versus M03100_2.00 (HOXA13); m=51/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.526504; --------ktTTTATt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.4332 8.83117 0 6.08365 5.43478 100 11.1511 11.6531 c 0 0 0 0 0 0 0 0 9.31174 11.4286 0 0 1.81159 0 0 2.43902 g 0 0 0 0 0 0 0 0 29.1498 15.5844 1.2 0 3.26087 0 0 18.9702 t 0 0 0 0 0 0 0 0 42.1053 64.1558 98.8 93.9163 89.4928 0 88.8489 66.9377

M01992_2.00_rc_shift7 (FOXI3_rc)
; oligos_7nt_mkv5_m3 versus M01992_2.00_rc (FOXI3_rc); m=52/241; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.526153; -------wTGTTTAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 29.9801 0.0586854 11.7958 0.0586854 0.0586854 0.0586854 93.9554 0.0712251 0 c 0 0 0 0 0 0 0 0.0996016 0.0586854 0.0586854 0.0586854 0.0586854 0.0586854 0.0586854 35.6838 0 g 0 0 0 0 0 0 0 20.0199 0.0586854 88.0869 0.0586854 0.0586854 5.92723 0.0586854 7.19373 0 t 0 0 0 0 0 0 0 49.9004 99.8239 0.0586854 99.8239 99.8239 93.9554 5.92723 57.0513 0

M03253_2.00_shift8 (HOXC6)
; oligos_7nt_mkv5_m3 versus M03253_2.00 (HOXC6); m=53/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.524768; --------tTTTTATt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.5912 9.97145 3.14363 1.1396 24.6171 96.2018 0.676773 4.70767 c 0 0 0 0 0 0 0 0 10.4353 6.45728 1.54472 0 1.27623 0.748544 2.5176 6.83371 g 0 0 0 0 0 0 0 0 20.5823 7.35779 1.27371 0 0.311968 0 2.86952 22.5892 t 0 0 0 0 0 0 0 0 47.3912 76.2135 94.0379 98.8604 73.7947 3.04963 93.9361 65.8694

M03141_2.00_shift8 (HOXD13)
; oligos_7nt_mkv5_m3 versus M03141_2.00 (HOXD13); m=54/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.523323; --------kTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 23.9826 6.56506 0 0.57554 13.7845 99.8549 3.89785 8.32595 c 0 0 0 0 0 0 0 0 10.6105 3.98593 0 0 0 0 3.62903 0 g 0 0 0 0 0 0 0 0 30.0872 8.7925 0.145138 0.431655 0 0.145138 0 30.7352 t 0 0 0 0 0 0 0 0 35.3198 80.6565 99.8549 98.9928 86.2155 0 92.4731 60.9389

M01685_2.00_rc_shift7 (M01685_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01685_2.00_rc; m=55/241; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.522307; -------wwWwhyyk- ; cor=; Ncor= a 0 0 0 0 0 0 0 51.7606 25.5906 27.9818 33.4131 28.212 21.7317 23.1669 18.858 0 c 0 0 0 0 0 0 0 7.66473 13.9047 0.170598 17.6185 25.0218 27.3515 26.3831 22.5771 0 g 0 0 0 0 0 0 0 13.5533 0.0299635 0.214715 8.15758 13.3264 13.996 24.8467 28.9896 0 t 0 0 0 0 0 0 0 27.0214 60.4747 71.6329 40.8108 33.4398 36.9207 25.6034 29.5752 0

M03129_2.00_shift8 (HOXC13)
; oligos_7nt_mkv5_m3 versus M03129_2.00 (HOXC13); m=56/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.521043; --------kTTTTATT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 23.3071 8.55346 1.07692 1.5456 10.4895 99.064 2.88754 14.4105 c 0 0 0 0 0 0 0 0 12.7559 5.15723 0 0 0.699301 0.312012 0.607903 0.10917 g 0 0 0 0 0 0 0 0 27.874 6.41509 1.23077 0.309119 0 0.312012 0 16.1572 t 0 0 0 0 0 0 0 0 36.063 79.8742 97.6923 98.1453 88.8112 0.312012 96.5046 69.3231

M01692_2.00_rc_shift7 (M01692_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01692_2.00_rc; m=57/241; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.520943; -------aYtwtyhk- ; cor=; Ncor= a 0 0 0 0 0 0 0 45.4628 0.0420287 23.0937 27.8201 24.4532 23.1593 27.774 19.8875 0 c 0 0 0 0 0 0 0 10.0432 29.0959 15.6357 21.2373 23.4943 25.0882 26.4194 21.979 0 g 0 0 0 0 0 0 0 22.8031 0.00976059 7.23955 15.5764 19.0441 19.5387 20.168 26.3137 0 t 0 0 0 0 0 0 0 21.6909 70.8523 54.031 35.3662 33.0083 32.2138 25.6386 31.8198 0

M07300_2.00_rc_shift1 (LIN54_rc)
; oligos_7nt_mkv5_m3 versus M07300_2.00_rc (LIN54_rc); m=58/241; ncol2=15; w=-4; offset=-4; strand=R; shift=1; score=0.518815; -wTTYrAATTTtrAAw ; cor=; Ncor= a 0 53.0885 0 0 0 46.9115 100 96.995 11.8531 5.0083 1.3356 11.3523 55.2588 82.9716 68.9482 38.7312 c 0 1.6694 0 0 27.212 0 0 1.1686 2.3372 0.1669 4.3406 17.8631 6.8447 0.1669 4.6745 10.1836 g 0 15.5259 0 0 0.1669 53.0885 0 0.1669 0 2.3372 1.0017 22.0367 28.8815 6.8447 3.8397 8.1803 t 0 29.7162 100 100 72.621 0 0 1.6694 85.8097 92.4875 93.3222 48.7479 9.015 10.0167 22.5376 42.9048

M03175_2.00_shift8 (HOXB13)
; oligos_7nt_mkv5_m3 versus M03175_2.00 (HOXB13); m=59/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.516716; --------kTTTTATt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.1075 8.97503 0.625652 0.607577 9.70316 99.7489 3.53141 12.077 c 0 0 0 0 0 0 0 0 6.90399 4.37045 0.0347584 0 0.829876 0 1.29032 0.278164 g 0 0 0 0 0 0 0 0 36.4617 14.308 2.6764 0 0.702202 0.251076 0.747029 23.1803 t 0 0 0 0 0 0 0 0 35.5268 72.3465 96.6632 99.3924 88.7648 0 94.4312 64.4645

M03015_2.00_rc_shift7 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M03015_2.00_rc (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1_rc); m=60/241; ncol2=11; w=0; offset=2; strand=R; shift=7; score=0.516143; -------wTrTTKAYw ; cor=; Ncor= a 0 0 0 0 0 0 0 55.72 0.961689 51.7015 0.595808 0.305564 0.242522 80.2927 0.270184 46.2324 c 0 0 0 0 0 0 0 5.23305 2.26311 0.878735 0.75008 0 0.113177 1.69366 72.2134 10.5677 g 0 0 0 0 0 0 0 7.36504 0.141117 46.77 0.297904 0.578964 28.9518 7.17419 1.78004 8.76129 t 0 0 0 0 0 0 0 31.682 96.6341 0.649731 98.3562 99.1155 70.6925 10.8394 25.7364 34.4387

M09251_2.00_rc_shift1 (BORCS8-MEF2B,MEF2B_rc)
; oligos_7nt_mkv5_m3 versus M09251_2.00_rc (BORCS8-MEF2B,MEF2B_rc); m=61/241; ncol2=14; w=-4; offset=-4; strand=R; shift=1; score=0.514974; -rkkkCTATTTTtrG- ; cor=; Ncor= a 0 25.4 19.4 20.4 16.8 4.8 0.2 86.2 10.6 7.6 3.6 13.4 17 47.2 12.2 0 c 0 11.8 11 3.6 10.4 77.2 8.8 2.6 2 0.6 4.8 11.8 5.6 0 5.2 0 g 0 41.4 25.2 27.2 37.4 4 0.2 3.2 0.6 0.4 1.4 4.8 14 48.8 69.6 0 t 0 21.4 44.4 48.8 35.4 14 90.8 8 86.8 91.4 90.2 70 63.4 4 13 0

M02681_2.00_rc_shift7 (FOXD1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M02681_2.00_rc (FOXD1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc); m=62/241; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.514103; -------wTGTTTAC- ; cor=; Ncor= a 0 0 0 0 0 0 0 40 0 5 0 0 0 100 5 0 c 0 0 0 0 0 0 0 15 0 0 5 0 0 0 85 0 g 0 0 0 0 0 0 0 10 0 90 5 0 5 0 5 0 t 0 0 0 0 0 0 0 35 100 5 90 100 95 0 5 0

M03048_2.00_rc_shift2 (FOXI2,FOXI3,FOXJ3_rc)
; oligos_7nt_mkv5_m3 versus M03048_2.00_rc (FOXI2,FOXI3,FOXJ3_rc); m=63/241; ncol2=13; w=-3; offset=-3; strand=R; shift=2; score=0.512829; --TGTTTATGTTTAC- ; cor=; Ncor= a 0 0 0 4.02576 0 0.21645 3.34646 77.87 2.59434 18.0277 1.37615 6.59341 5.66893 85.4286 0.170648 0 c 0 0 3.24826 3.05958 7.34967 1.94805 1.9685 2.90456 0 1.23267 0 1.97802 0.680272 2.85714 77.4744 0 g 0 0 0 91.7874 0.668151 8.44156 18.8976 2.90456 0 79.9692 2.75229 0 0.453515 8 0.170648 0 t 0 0 96.7517 1.12721 91.9822 89.3939 75.7874 16.3209 97.4057 0.770416 95.8716 91.4286 93.1973 3.71429 22.1843 0

M03018_2.00_rc_shift2 (FOXI2,FOXI3,FOXJ2_rc)
; oligos_7nt_mkv5_m3 versus M03018_2.00_rc (FOXI2,FOXI3,FOXJ2_rc); m=64/241; ncol2=13; w=-3; offset=-3; strand=R; shift=2; score=0.511869; --TGTTkwTGTTTAC- ; cor=; Ncor= a 0 0 2.25543 9.80022 1.20964 11.2156 13.2479 62.844 0.0878049 15.9307 1.03981 5.39481 6.30264 89.007 0.373669 0 c 0 0 3.26396 1.55192 3.37769 1.83848 0.930674 1.07066 3.19024 0.538721 0.564468 1.2227 0.425729 0.786559 77.4055 0 g 0 0 2.20959 76.747 3.05201 6.62357 28.471 1.88754 0.253659 82.1356 0.87146 2.02539 4.90514 5.64435 1.7251 0 t 0 0 92.271 11.9009 92.3607 80.3224 57.3504 34.1978 96.4683 1.3949 97.5243 91.3571 88.3665 4.56204 20.4957 0

M01974_2.00_rc_shift7 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI2,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M01974_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI2,FOXI3,FOXS1_rc); m=65/241; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.511828; -------tTGTTTAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 21.7448 0.0285388 2.88242 0.0285388 5.7363 0.0285388 97.0605 4.20133 0 c 0 0 0 0 0 0 0 13.0642 0.0285388 0.0285388 0.0285388 0.0285388 0.0285388 0.0285388 54.1181 0 g 0 0 0 0 0 0 0 21.7448 0.0285388 91.3527 0.0285388 0.0285388 17.1518 0.0285388 0.0415973 0 t 0 0 0 0 0 0 0 43.4462 99.9144 5.7363 99.9144 94.2066 82.7911 2.88242 41.6389 0

M01978_2.00_rc_shift7 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXG1,FOXI2,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M01978_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXG1,FOXI2,FOXI3,FOXS1_rc); m=66/241; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.511734; -------wTGTTTAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 33.2781 0.110619 0.110619 0.110619 0.110619 0.110619 99.6681 0.124378 0 c 0 0 0 0 0 0 0 0.165563 0.110619 0.110619 0.110619 0.110619 0.110619 0.110619 62.3134 0 g 0 0 0 0 0 0 0 16.7219 0.110619 99.6681 0.110619 0.110619 0.110619 0.110619 0.124378 0 t 0 0 0 0 0 0 0 49.8344 99.6681 0.110619 99.6681 99.6681 99.6681 0.110619 37.4378 0

M03739_2.00_rc_shift6 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI2,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M03739_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI2,FOXI3,FOXS1_rc); m=67/241; ncol2=13; w=0; offset=1; strand=R; shift=6; score= 0.5116; ------wwTGTTTAyw ; cor=; Ncor= a 0 0 0 0 0 0 45.8798 31.6376 4.55639 17.4642 0.398974 1.48632 0.416107 79.6598 1.16311 26.9331 c 0 0 0 0 0 0 9.06453 8.80799 2.15126 0.457424 0.555714 0 0.161074 0.632039 47.15 11.959 g 0 0 0 0 0 0 10.4689 11.587 0.668092 81.3042 0.270732 2.22253 6.37584 8.64169 1.84329 12.1466 t 0 0 0 0 0 0 34.5868 47.9674 92.6243 0.774103 98.7746 96.2912 93.047 11.0664 49.8436 48.9613

M01687_2.00_rc_shift4 (M01687_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01687_2.00_rc; m=68/241; ncol2=8; w=-1; offset=-1; strand=R; shift=4; score=0.511199; ----ATTAWTTT---- ; cor=; Ncor= a 0 0 0 0 77.6997 20.5934 16.6759 83.2686 30.5494 16.6759 11.7803 4.03355 0 0 0 0 c 0 0 0 0 0.0369822 0.0293772 0.0277469 0.0277469 0.0277469 0.0277469 0.0293772 12.0208 0 0 0 0 g 0 0 0 0 3.73521 2.9671 0.0277469 0.0277469 0.0277469 0.0277469 0.0293772 0.0399361 0 0 0 0 t 0 0 0 0 18.5281 76.4101 83.2686 16.6759 69.3951 83.2686 88.161 83.9058 0 0 0 0

M01677_2.00_rc_shift7 (M01677_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01677_2.00_rc; m=69/241; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.511098; -------dYtwtymk- ; cor=; Ncor= a 0 0 0 0 0 0 0 42.6484 0.0236203 21.1901 28.4048 23.7414 22.7749 27.9056 15.6489 0 c 0 0 0 0 0 0 0 6.12874 26.6916 17.8773 21.4679 24.4645 25.1702 27.0808 19.4997 0 g 0 0 0 0 0 0 0 25.8675 0.000129006 3.33187 15.4337 17.7648 17.7371 20.2636 27.1235 0 t 0 0 0 0 0 0 0 25.3553 73.2846 57.6007 34.6936 34.0293 34.3177 24.75 37.7279 0

M03247_2.00_shift8 (M03247_2.00)
; oligos_7nt_mkv5_m3 versus M03247_2.00; m=70/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.509343; --------dtTTTATt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.2933 12.7523 1.00825 1.95531 11.3423 99.7631 4.5208 15.439 c 0 0 0 0 0 0 0 0 8.68533 5.04587 0.091659 0 2.24398 0.189484 0.271248 0 g 0 0 0 0 0 0 0 0 30.3749 17.7982 2.38313 0 0.489596 0.0473709 0 16.8221 t 0 0 0 0 0 0 0 0 34.6464 64.4037 96.517 98.0447 85.9241 0 95.208 67.7388

M01680_2.00_rc_shift4 (M01680_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01680_2.00_rc; m=71/241; ncol2=8; w=-1; offset=-1; strand=R; shift=4; score=0.506728; ----TTTATTTT---- ; cor=; Ncor= a 0 0 0 0 0.328947 0.247525 0.247525 74.505 0.247525 0.247525 0.247525 0.328947 0 0 0 0 c 0 0 0 0 0.328947 0.247525 0.247525 0.247525 0.247525 0.247525 0.247525 0.328947 0 0 0 0 g 0 0 0 0 0.328947 0.247525 0.247525 0.247525 0.247525 0.247525 0.247525 0.328947 0 0 0 0 t 0 0 0 0 99.0132 99.2574 99.2574 25 99.2574 99.2574 99.2574 99.0132 0 0 0 0

M00296_2.00_rc_shift9 (HOXD13_rc)
; oligos_7nt_mkv5_m3 versus M00296_2.00_rc (HOXD13_rc); m=72/241; ncol2=8; w=0; offset=4; strand=R; shift=9; score=0.505781; ---------wTTTATm ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 28.8872 1.52227 3.4782 18.7517 99.9792 6.25521 55.8958 c 0 0 0 0 0 0 0 0 0 7.78543 0.00757346 0.00694252 0.00694252 0.00694252 2.78395 25.1968 g 0 0 0 0 0 0 0 0 0 14.4491 0.00757346 0.00694252 0.00694252 0.00694252 0.00694252 10.2409 t 0 0 0 0 0 0 0 0 0 48.8783 98.4626 96.5079 81.2344 0.00694252 90.9539 8.66656

M08213_2.00_rc_shift4 (BORCS8-MEF2B,MEF2A_rc)
; oligos_7nt_mkv5_m3 versus M08213_2.00_rc (BORCS8-MEF2B,MEF2A_rc); m=73/241; ncol2=8; w=-1; offset=-1; strand=R; shift=4; score=0.504608; ----gcTATTTT---- ; cor=; Ncor= a 0 0 0 0 10.2353 7.41179 6 72.9412 6.8235 5.88239 4.2353 6.7059 0 0 0 0 c 0 0 0 0 7.88239 67.5293 5.4118 7.0588 4.8235 3.7647 4.5882 7.7647 0 0 0 0 g 0 0 0 0 58.9411 9.17649 0.5882 7.7647 3.6471 3.8824 2.8235 4.5882 0 0 0 0 t 0 0 0 0 22.9412 15.8824 88 12.2353 84.7059 86.4705 88.353 80.9412 0 0 0 0

M00253_2.00_rc_shift7 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M00253_2.00_rc (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1_rc); m=74/241; ncol2=11; w=0; offset=2; strand=R; shift=7; score=0.504403; -------tTrwTTATw ; cor=; Ncor= a 0 0 0 0 0 0 0 17.7023 7.41999 34.7728 31.0808 0.028741 10.5045 99.9138 0.028741 47.9225 c 0 0 0 0 0 0 0 17.7023 7.41999 5.06064 9.48884 0.028741 0.028741 0.028741 19.2366 7.32644 g 0 0 0 0 0 0 0 17.7023 7.41999 35.6583 0.028741 10.0734 0.028741 0.028741 0.028741 17.8925 t 0 0 0 0 0 0 0 46.8931 77.74 24.5082 59.4016 89.8691 89.438 0.028741 80.7059 26.8585

M06211_2.00_rc_shift9 (HOXC5,HOXC6_rc)
; oligos_7nt_mkv5_m3 versus M06211_2.00_rc (HOXC5,HOXC6_rc); m=75/241; ncol2=8; w=0; offset=4; strand=R; shift=9; score=0.504165; ---------TTTTATG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 14.2857 14.2857 0 0 100 0 0 c 0 0 0 0 0 0 0 0 0 14.2857 0 0 0 0 14.2857 14.2857 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 71.4286 t 0 0 0 0 0 0 0 0 0 71.4286 85.7143 100 100 0 85.7143 14.2857

M05104_2.00_shift8 (HOXC5,HOXC6,HOXD9)
; oligos_7nt_mkv5_m3 versus M05104_2.00 (HOXC5,HOXC6,HOXD9); m=76/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.504016; --------kTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 22.267 9.56522 0.324675 0.512629 19.5059 98.9976 0 2.53062 c 0 0 0 0 0 0 0 0 15.3853 5.4526 0 0.0745643 0 0 0 1.86619 g 0 0 0 0 0 0 0 0 30.5738 8.95937 0.732839 0 0.165688 0 1.08504 33.9785 t 0 0 0 0 0 0 0 0 31.7739 76.0228 98.9425 99.4128 80.3284 1.00241 98.915 61.6247

M10558_2.00_rc_shift4 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXL1,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M10558_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXL1,FOXS1_rc); m=77/241; ncol2=16; w=-1; offset=-1; strand=R; shift=4; score=0.501158; ----wtywTrTTTATr ; cor=; Ncor= a 0 0 0 0 34.7826 21.7391 17.3913 34.7826 0 39.1304 0 0 0 91.3043 0 30.4348 c 0 0 0 0 17.3913 21.7391 39.1304 8.69565 4.34783 0 0 0 0 0 8.69565 8.69565 g 0 0 0 0 17.3913 13.0435 13.0435 17.3913 4.34783 60.8696 0 0 4.34783 8.69565 0 43.4783 t 0 0 0 0 30.4348 43.4783 30.4348 39.1304 91.3043 0 100 100 95.6522 0 91.3043 17.3913

M03252_2.00_shift8 (HOXC6)
; oligos_7nt_mkv5_m3 versus M03252_2.00 (HOXC6); m=78/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.500407; --------wTTTWAyG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.269 14.2081 2.74463 2.71605 26.4339 99.8733 0 5.6928 c 0 0 0 0 0 0 0 0 6.34518 5.42986 0 0 0.498753 0.126743 49.905 1.28894 g 0 0 0 0 0 0 0 0 20.3046 9.04977 3.22196 0 1.24688 0 0 84.6402 t 0 0 0 0 0 0 0 0 47.0812 71.3122 94.0334 97.284 71.8204 0 50.095 8.37809

M03098_2.00_shift8 (HOXA13)
; oligos_7nt_mkv5_m3 versus M03098_2.00 (HOXA13); m=79/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.498799; --------ktTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 23.4043 13.569 2.85714 5.35714 14.3312 96.4486 4.60405 15.6317 c 0 0 0 0 0 0 0 0 8.31721 7.63968 0 1.60714 0.636943 0 0.368324 1.39186 g 0 0 0 0 0 0 0 0 36.7505 19.9544 5 0.892857 2.86624 3.5514 0 27.7302 t 0 0 0 0 0 0 0 0 31.528 58.8369 92.1429 92.1429 82.1656 0 95.0276 55.2463

M03030_2.00_shift7 (FOXB1,FOXB2)
; oligos_7nt_mkv5_m3 versus M03030_2.00 (FOXB1,FOXB2); m=80/241; ncol2=11; w=0; offset=2; strand=D; shift=7; score=0.498776; -------aTrTTKACw ; cor=; Ncor= a 0 0 0 0 0 0 0 58.5879 2.05738 65.811 3.02056 5.12441 1.0445 92.7719 1.51626 65.0509 c 0 0 0 0 0 0 0 8.12747 2.19734 1.49147 0.657251 0 1.07311 1.53241 83.6513 5.4767 g 0 0 0 0 0 0 0 8.37597 0 32.296 0.657251 2.86483 27.901 3.25468 0.660308 2.91912 t 0 0 0 0 0 0 0 24.9086 95.7453 0.401549 95.6649 92.0108 69.9814 2.44101 14.1722 26.5533

M05332_2.00_shift8 (HOXC5,HOXC6,HOXC9)
; oligos_7nt_mkv5_m3 versus M05332_2.00 (HOXC5,HOXC6,HOXC9); m=81/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.497579; --------kTTTTATK ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.4001 5.99539 0 0 19.67 99.7018 0 1.95314 c 0 0 0 0 0 0 0 0 13.7122 3.27021 0 0 0 0 0.0332226 0.729596 g 0 0 0 0 0 0 0 0 35.7461 6.19767 0 0.548652 0 0 0 29.1385 t 0 0 0 0 0 0 0 0 26.1416 84.5367 100 99.4513 80.33 0.298211 99.9668 68.1787

M03229_2.00_shift8 (HOXC10,HOXC6)
; oligos_7nt_mkv5_m3 versus M03229_2.00 (HOXC10,HOXC6); m=82/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.497268; --------wtTTwATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.6724 14.5876 5.38218 4.13724 34.4364 93.408 1.15725 1.51237 c 0 0 0 0 0 0 0 0 14.6205 13.2415 2.48756 0.782038 1.75801 0 7.1931 8.32509 g 0 0 0 0 0 0 0 0 21.2517 13.398 7.21393 0.353179 1.16339 0 6.44429 37.0883 t 0 0 0 0 0 0 0 0 38.4554 58.7729 84.9163 94.7275 62.6422 6.59204 85.2054 53.0742

M00294_2.00_rc_shift9 (HOXD13_rc)
; oligos_7nt_mkv5_m3 versus M00294_2.00_rc (HOXD13_rc); m=83/241; ncol2=8; w=0; offset=4; strand=R; shift=9; score=0.496772; ---------tTTWACr ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 21.2137 4.3225 2.58643 25.8062 99.3357 18.3024 30.3688 c 0 0 0 0 0 0 0 0 0 4.04887 0.00719217 0.00644995 1.29644 0.00644995 77.1106 2.96949 g 0 0 0 0 0 0 0 0 0 14.1458 4.3225 0.00644995 0.00644995 0.00644995 0.00653424 49.6223 t 0 0 0 0 0 0 0 0 0 60.5917 91.3478 97.4007 72.8909 0.651445 4.5805 17.0394

M07551_2.00_shift2 (CTCF)
; oligos_7nt_mkv5_m3 versus M07551_2.00 (CTCF); m=84/241; ncol2=11; w=-3; offset=-3; strand=D; shift=2; score=0.496769; --YTTTTrTTTTT--- ; cor=; Ncor= a 0 0 0 5.2632 0 5.2632 0 52.6316 0 5.2632 0 0 0 0 0 0 c 0 0 31.5789 0 0 0 0 5.2632 5.2632 10.5263 0 0 0 0 0 0 g 0 0 0 10.5263 0 15.7895 0 26.3158 0 10.5263 0 0 0 0 0 0 t 0 0 68.4211 84.2105 100 78.9474 100 15.7895 94.7368 73.6842 100 100 100 0 0 0

M10943_2.00_rc_shift2 (BORCS8-MEF2B,MEF2A_rc)
; oligos_7nt_mkv5_m3 versus M10943_2.00_rc (BORCS8-MEF2B,MEF2A_rc); m=85/241; ncol2=16; w=-3; offset=-3; strand=R; shift=2; score=0.496294; --rdkCTATTTwTAGm ; cor=; Ncor= a 0 0 44.7368 26.3158 7.89474 0 0 100 2.63158 13.1579 21.0526 60.5263 0 100 10.5263 36.8421 c 0 0 10.5263 5.26316 7.89474 92.1053 0 0 0 0 0 0 0 0 2.63158 52.6316 g 0 0 31.5789 34.2105 31.5789 0 0 0 0 0 0 0 0 0 86.8421 0 t 0 0 13.1579 34.2105 52.6316 7.89474 100 0 97.3684 86.8421 78.9474 39.4737 100 0 0 10.5263

M03228_2.00_shift8 (HOXC10,HOXC6)
; oligos_7nt_mkv5_m3 versus M03228_2.00 (HOXC10,HOXC6); m=86/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.494639; --------ktTTwATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 23.9526 12.427 2.34706 3.15315 34.5756 96.251 0.408163 12.0858 c 0 0 0 0 0 0 0 0 7.65975 6.58882 1.69296 0.12285 0 0 2.61224 2.12157 g 0 0 0 0 0 0 0 0 26.4917 15.3183 5.07888 0 2.23602 0.733496 0.571429 56.3051 t 0 0 0 0 0 0 0 0 41.8959 65.6658 90.8811 96.724 63.1884 3.01548 96.4082 29.4875

M07646_2.00_shift4 (ZNF613)
; oligos_7nt_mkv5_m3 versus M07646_2.00 (ZNF613); m=87/241; ncol2=9; w=-1; offset=-1; strand=D; shift=4; score=0.493842; ----mTTTTTTTW--- ; cor=; Ncor= a 0 0 0 0 29.5902 9.2623 4.34426 0.0819672 0.0819672 3.68852 3.68852 0.0819672 25.3279 0 0 0 c 0 0 0 0 42.377 7.95082 1.06557 0.0819672 2.04918 5.65574 0.0819672 0.0819672 0.0819672 0 0 0 g 0 0 0 0 18.1148 0.0819672 0.0819672 21.7213 0.0819672 0.0819672 0.0819672 0.0819672 0.0819672 0 0 0 t 0 0 0 0 9.91803 82.7049 94.5082 78.1148 97.7869 90.5738 96.1475 99.7541 74.5082 0 0 0

M05109_2.00_shift8 (HOXC5,HOXC6,HOXD9)
; oligos_7nt_mkv5_m3 versus M05109_2.00 (HOXC5,HOXC6,HOXD9); m=88/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.493458; --------dTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.9182 9.98407 0 0.746088 24.9587 98.7031 0.0234852 3.48391 c 0 0 0 0 0 0 0 0 13.2555 5.53356 0 0 0 0 2.5775 2.53683 g 0 0 0 0 0 0 0 0 35.4703 10.0205 0 0 0.0366703 0 1.32691 32.4827 t 0 0 0 0 0 0 0 0 25.356 74.4619 100 99.2539 75.0046 1.2969 96.0721 61.4965

M09572_2.00_shift8 (M09572_2.00)
; oligos_7nt_mkv5_m3 versus M09572_2.00; m=89/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.492401; --------rtTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.8 13.5 0.1 0.1 0.1 99.7 0.1 1.7 c 0 0 0 0 0 0 0 0 15.4 7.3 0.1 0.1 0.1 0.1 0.1 0.1 g 0 0 0 0 0 0 0 0 28.5 11.5 0.1 0.1 0.1 0.1 0.1 49.3 t 0 0 0 0 0 0 0 0 24.3 67.8 99.7 99.7 99.7 0.1 99.7 48.9

M03283_2.00_shift8 (HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M03283_2.00 (HOXC5,HOXC6); m=90/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.489504; --------wtTTwATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 33.3333 14.4737 3.36538 7.98122 48.2234 87.7828 2.15517 0 c 0 0 0 0 0 0 0 0 9.74359 13.1579 0 0 0 3.16742 13.3621 11.7264 g 0 0 0 0 0 0 0 0 14.359 8.55263 3.36538 0.938967 1.52284 3.16742 0.862069 25.0814 t 0 0 0 0 0 0 0 0 42.5641 63.8158 93.2692 91.0798 50.2538 5.88235 83.6207 63.1922

M03034_2.00_rc_shift8 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXL1,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M03034_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXL1,FOXS1_rc); m=91/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.488621; --------TGTTTAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.350443 22.113 0 0.310366 0 91.8171 2.83803 0 c 0 0 0 0 0 0 0 0 0 0 1.01792 0 1.043 0 54.2875 0 g 0 0 0 0 0 0 0 0 1.11317 77.887 1.66938 0.786261 11.4913 7.99078 0.263531 0 t 0 0 0 0 0 0 0 0 98.5364 0 97.3127 98.9034 87.4657 0.192086 42.611 0

M05114_2.00_shift8 (HOXC6,HOXD10)
; oligos_7nt_mkv5_m3 versus M05114_2.00 (HOXC6,HOXD10); m=92/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.488597; --------rTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.5264 6.05307 0 0 14.9956 98.0885 0 0 c 0 0 0 0 0 0 0 0 12.7245 3.93864 0 0 0 0 0 0.814664 g 0 0 0 0 0 0 0 0 40.1744 9.16252 0.15361 0 0 0 0 32.9939 t 0 0 0 0 0 0 0 0 20.5747 80.8458 99.8464 100 85.0044 1.91147 100 66.1914

M05334_2.00_shift8 (HOXC5,HOXC6,HOXC9)
; oligos_7nt_mkv5_m3 versus M05334_2.00 (HOXC5,HOXC6,HOXC9); m=93/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.487627; --------rTTTWATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 28.4254 11.5352 0.252958 0.722813 25.7764 98.2163 0.0856431 4.62912 c 0 0 0 0 0 0 0 0 14.2495 7.4459 0 0 0 0 3.20772 0.0655539 g 0 0 0 0 0 0 0 0 33.6769 11.592 0 0 0.223985 0 1.53379 33.6645 t 0 0 0 0 0 0 0 0 23.6483 69.4269 99.747 99.2772 73.9996 1.78371 95.1728 61.6409

M08306_2.00_shift4 (ZNF384)
; oligos_7nt_mkv5_m3 versus M08306_2.00 (ZNF384); m=94/241; ncol2=9; w=-1; offset=-1; strand=D; shift=4; score=0.48696; ----CTTTTTTTT--- ; cor=; Ncor= a 0 0 0 0 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0 0 0 c 0 0 0 0 75.8041 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0 0 0 g 0 0 0 0 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0.0730994 0 0 0 t 0 0 0 0 24.0497 99.7807 99.7807 99.7807 99.7807 99.7807 99.7807 99.7807 99.7807 0 0 0

M08325_2.00_shift4 (ZNF22)
; oligos_7nt_mkv5_m3 versus M08325_2.00 (ZNF22); m=95/241; ncol2=9; w=-1; offset=-1; strand=D; shift=4; score=0.48696; ----TTTTTTTTT--- ; cor=; Ncor= a 0 0 0 0 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0 0 0 c 0 0 0 0 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0 0 0 g 0 0 0 0 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0.13089 0 0 0 t 0 0 0 0 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 99.6073 0 0 0

M10812_2.00_rc_shift3 (PAX4_rc)
; oligos_7nt_mkv5_m3 versus M10812_2.00_rc (PAX4_rc); m=96/241; ncol2=11; w=-2; offset=-2; strand=R; shift=3; score=0.486942; ---sbtAATTwkTy-- ; cor=; Ncor= a 0 0 0 5.26316 5 20 80 90 0 5 50 15 0 13.3333 0 0 c 0 0 0 31.5789 25 20 5 0 0 10 10 5 22.2222 46.6667 0 0 g 0 0 0 47.3684 45 5 5 0 0 10 0 25 5.55556 13.3333 0 0 t 0 0 0 15.7895 25 55 10 10 100 75 40 55 72.2222 26.6667 0 0

M03062_2.00_rc_shift8 (M03062_2.00_rc)
; oligos_7nt_mkv5_m3 versus M03062_2.00_rc; m=97/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.485578; --------TGTTTAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 4.10243 15.8346 5.17674 6.47157 2.58999 71.6054 1.86097 0 c 0 0 0 0 0 0 0 0 2.19493 5.33537 2.44014 4.21128 2.50219 8.00719 61.7406 0 g 0 0 0 0 0 0 0 0 0 68.3308 10.6043 3.99714 16.1984 12.1406 0 0 t 0 0 0 0 0 0 0 0 93.7026 10.4992 81.7788 85.32 78.7094 8.24681 36.3985 0

M03060_2.00_rc_shift8 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M03060_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1_rc); m=98/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.484961; --------TGTTTAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 22.49 1.77515 3.48624 0.411184 83.4739 0 0 c 0 0 0 0 0 0 0 0 0.60241 0 0 3.76147 2.13816 0 38.7065 0 g 0 0 0 0 0 0 0 0 0 76.8072 0.591716 1.92661 16.0362 12.6476 1.49254 0 t 0 0 0 0 0 0 0 0 99.3976 0.702811 97.6331 90.8257 81.4145 3.87858 59.801 0

M03132_2.00_shift8 (HOXC11)
; oligos_7nt_mkv5_m3 versus M03132_2.00 (HOXC11); m=99/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.482147; --------wtTTwATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.8379 16.5589 4.43605 7.37836 28.9492 92.7315 4.81016 8.43284 c 0 0 0 0 0 0 0 0 14.7367 8.5692 1.44722 1.02433 1.94025 0 11.4579 6.47042 g 0 0 0 0 0 0 0 0 23.036 12.0348 5.41136 1.34443 1.23626 0 7.53952 32.8983 t 0 0 0 0 0 0 0 0 36.3894 62.8371 88.7054 90.2529 67.8743 7.26854 76.1924 52.1985

M03135_2.00_shift9 (HOXC12)
; oligos_7nt_mkv5_m3 versus M03135_2.00 (HOXC12); m=100/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.481721; ---------TTTTATT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 7.97118 1.35097 2.28491 13.4884 88.3074 1.47249 2.54091 c 0 0 0 0 0 0 0 0 0 5.56181 0.168871 0.0564175 0.709914 0.0510595 7.98243 11.025 g 0 0 0 0 0 0 0 0 0 8.57915 1.12581 0.0846262 1.12607 0 1.18832 11.9509 t 0 0 0 0 0 0 0 0 0 77.8879 97.3543 97.574 84.6756 11.6416 89.3568 74.4832

M08420_2.00_shift8 (M08420_2.00)
; oligos_7nt_mkv5_m3 versus M08420_2.00; m=101/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.481481; --------kTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.7977 17.5423 0 0 2.90925 95.8749 0 3.60399 c 0 0 0 0 0 0 0 0 0 6.38298 0 0 0 0 8.07642 0 g 0 0 0 0 0 0 0 0 32.7833 4.99349 0 0 0 4.12505 0 64.0469 t 0 0 0 0 0 0 0 0 45.419 71.0812 100 100 97.0908 0 91.9236 32.3491

M03134_2.00_shift8 (HOXC11)
; oligos_7nt_mkv5_m3 versus M03134_2.00 (HOXC11); m=102/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.481401; --------ktTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.2759 14.5644 3.79859 7.73381 20.0366 90.354 6.99756 3.17173 c 0 0 0 0 0 0 0 0 17.319 5.0065 0 0.44964 1.18939 2.47788 9.03173 7.65745 g 0 0 0 0 0 0 0 0 26.0274 14.0442 6.00707 0 5.3065 0 0.895037 42.9089 t 0 0 0 0 0 0 0 0 37.3777 66.3849 90.1943 91.8165 73.4675 7.16814 83.0757 46.2619

M05290_2.00_shift8 (HOXB9,HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M05290_2.00 (HOXB9,HOXC5,HOXC6); m=103/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.480806; --------rtTTWATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 34.2756 13.1792 0 2.58398 29.9398 100 2.2763 4.42433 c 0 0 0 0 0 0 0 0 14.0459 7.74566 0.601375 0 1.92771 0 7.29984 3.46908 g 0 0 0 0 0 0 0 0 31.5371 13.6994 2.23368 0 0 0 1.64835 35.2438 t 0 0 0 0 0 0 0 0 20.1413 65.3757 97.1649 97.416 68.1325 0 88.7755 56.8627

M00164_2.00_rc_shift8 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M00164_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc); m=104/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.478996; --------TrTTKAyw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 5.3457 33.2944 4.12605 4.00149 4.43052 72.07 12.5062 35.4381 c 0 0 0 0 0 0 0 0 4.55531 3.33806 2.35684 0.03164 0.0719717 3.18241 41.9393 19.6443 g 0 0 0 0 0 0 0 0 4.78886 60.0627 0.0770978 5.3477 25.4959 10.0507 10.8724 18.134 t 0 0 0 0 0 0 0 0 85.3101 3.30484 93.44 90.6192 70.0016 14.6969 34.6821 26.7836

M01691_2.00_rc_shift7 (M01691_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01691_2.00_rc; m=105/241; ncol2=7; w=0; offset=2; strand=R; shift=7; score=0.478483; -------atwwwyk-- ; cor=; Ncor= a 0 0 0 0 0 0 0 50.3232 19.3674 27.503 28.4747 30.0345 24.5068 20.4268 0 0 c 0 0 0 0 0 0 0 4.84751 22.9563 1.41099 15.4718 18.3999 25.2531 24.7011 0 0 g 0 0 0 0 0 0 0 21.2949 0.0723378 12.8622 9.57368 10.6158 19.0859 27.5733 0 0 t 0 0 0 0 0 0 0 23.5345 57.604 58.2238 46.4798 40.9498 31.1542 27.2989 0 0

M06200_2.00_rc_shift8 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6_rc)
; oligos_7nt_mkv5_m3 versus M06200_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6_rc); m=106/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.478354; --------TGTTTAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 5 0 0 0 0 100 5 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50 0 g 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 95 0 100 100 100 0 45 0

M03206_2.00_rc_shift9 (HOXD12_rc)
; oligos_7nt_mkv5_m3 versus M03206_2.00_rc (HOXD12_rc); m=107/241; ncol2=9; w=0; offset=4; strand=R; shift=9; score=0.477893; ---------TTTTATt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 8.35165 2.31111 0.769971 14.532 87.8943 0.450857 0.982318 c 0 0 0 0 0 0 0 0 0 7.98535 1.51111 0 0.246305 0 1.62308 16.8304 g 0 0 0 0 0 0 0 0 0 8.13187 4.53333 0 0.574713 0.767263 4.95942 14.6693 t 0 0 0 0 0 0 0 0 0 75.5311 91.6444 99.23 84.647 11.3384 92.9666 67.518

M09682_2.00_shift8 (HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M09682_2.00 (HOXC5,HOXC6); m=108/241; ncol2=9; w=0; offset=3; strand=D; shift=8; score=0.474601; --------ttTTAATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 7.23684 0.657895 19.9561 12.5 68.8596 98.0263 0.657895 0.657895 c 0 0 0 0 0 0 0 0 9.86842 20.614 0.657895 0 0.657895 0.657895 0.657895 0.657895 g 0 0 0 0 0 0 0 0 15.1316 14.2544 8.99123 0 8.99123 0.657895 4.82456 36.8421 t 0 0 0 0 0 0 0 0 67.7632 64.4737 70.3947 87.5 21.4912 0.657895 93.8596 61.8421

M05117_2.00_rc_shift8 (HOXC6,HOXD10_rc)
; oligos_7nt_mkv5_m3 versus M05117_2.00_rc (HOXC6,HOXD10_rc); m=109/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.473764; --------dTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.0358 6.58426 2.09966 0 12.7032 94.4279 0 0.851558 c 0 0 0 0 0 0 0 0 8.1352 3.56549 0.167973 0 0 0.432783 1.74255 1.35475 g 0 0 0 0 0 0 0 0 33.1997 6.8695 0 0.0572574 0 0 0.140528 30.2303 t 0 0 0 0 0 0 0 0 33.6293 82.9807 97.7324 99.9427 87.2968 5.1393 98.1169 67.5634

M05111_2.00_shift8 (HOXC5,HOXC6,HOXD9)
; oligos_7nt_mkv5_m3 versus M05111_2.00 (HOXC5,HOXC6,HOXD9); m=110/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.472617; --------gtTTWATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 22.8443 13.4576 0.292475 1.57068 27.9512 98.674 1.69318 3.97459 c 0 0 0 0 0 0 0 0 17.8331 10.4382 0 0 0 0.0276243 4.84864 0 g 0 0 0 0 0 0 0 0 40.2856 14.4755 4.73278 0 0.580232 0 1.82145 37.84 t 0 0 0 0 0 0 0 0 19.037 61.6287 94.9747 98.4293 71.4686 1.29834 91.6367 58.1854

M03045_2.00_rc_shift8 (FOXD3,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI2,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M03045_2.00_rc (FOXD3,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI2,FOXI3,FOXS1_rc); m=111/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.472259; --------TrTTTAC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2.57147 42.1102 0.281999 0.0934579 0.875985 77.7451 1.31838 0 c 0 0 0 0 0 0 0 0 14.6195 0.6827 0.328999 0 0.112627 1.60539 71.7836 0 g 0 0 0 0 0 0 0 0 0 56.3227 0 1.09034 19.6221 11.5196 2.54584 0 t 0 0 0 0 0 0 0 0 82.809 0.884407 99.389 98.8162 79.3893 9.1299 24.3522 0

M05395_2.00_shift8 (HOXA10,HOXC6)
; oligos_7nt_mkv5_m3 versus M05395_2.00 (HOXA10,HOXC6); m=112/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.471597; --------kTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 22.9094 4.51972 0 0 10.8053 98.5685 0 0.879813 c 0 0 0 0 0 0 0 0 14.6073 4.02553 0 0 0 0 0.732821 0.968601 g 0 0 0 0 0 0 0 0 32.7484 6.3832 0.0846433 0 0 0 0 31.4553 t 0 0 0 0 0 0 0 0 29.735 85.0716 99.9154 100 89.1947 1.43147 99.2672 66.6963

M03054_2.00_rc_shift8 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI2,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M03054_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI2,FOXI3,FOXS1_rc); m=113/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.47149; --------TGTTTAC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 16.6735 0 0 0 88.4672 0.221637 0 c 0 0 0 0 0 0 0 0 0.442294 0.411353 0 0.0688231 0 1.68263 77.7532 0 g 0 0 0 0 0 0 0 0 0 82.0924 0 0.784584 10.1758 4.38467 0 0 t 0 0 0 0 0 0 0 0 99.5577 0.822707 100 99.1466 89.8242 5.46549 22.0252 0

M03196_2.00_shift9 (CDX2)
; oligos_7nt_mkv5_m3 versus M03196_2.00 (CDX2); m=114/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.471169; ---------tTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 13.1579 3.56245 6.04396 6.46244 97.4779 0.0821355 7.96533 c 0 0 0 0 0 0 0 0 0 10.2541 2.13747 0.845309 0.125892 0.309735 8.9117 1.11432 g 0 0 0 0 0 0 0 0 0 20.6443 1.96982 0 0.96517 1.0177 0.533881 38.052 t 0 0 0 0 0 0 0 0 0 55.9437 92.3303 93.1107 92.4465 1.19469 90.4723 52.8683

M05112_2.00_shift8 (HOXC6,HOXD10)
; oligos_7nt_mkv5_m3 versus M05112_2.00 (HOXC6,HOXD10); m=115/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.471013; --------rtTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 27.0316 12.5541 0.858545 0 20.9387 99.2893 0 0.784122 c 0 0 0 0 0 0 0 0 16.5895 11.7647 0 0 0 0 1.69702 1.9603 g 0 0 0 0 0 0 0 0 37.4316 15.2024 2.04415 0 0 0 0 39.0591 t 0 0 0 0 0 0 0 0 18.9474 60.4787 97.0973 100 79.0613 0.710702 98.303 58.1965

M07301_2.00_rc_shift1 (LIN54_rc)
; oligos_7nt_mkv5_m3 versus M07301_2.00_rc (LIN54_rc); m=116/241; ncol2=14; w=-4; offset=-4; strand=R; shift=1; score=0.470098; -wTTYrAATTTtrAA- ; cor=; Ncor= a 0 57 0 0 0 52.1667 100 98.1667 16 2.8333 2.6667 11 53.1667 81.1667 70 0 c 0 0.5 0 0 31.1667 0 0 0.6667 4.6667 1.3333 6.8333 19.3333 7.1667 0.5 3.5 0 g 0 13.1667 0 0 0 47.8333 0 0 0 2.1667 1.5 20.1667 27.5 7.1667 6.8333 0 t 0 29.3333 100 100 68.8333 0 0 1.1667 79.3333 93.6667 89 49.5 12.1667 11.1667 19.6667 0

M03086_2.00_shift8 (HOXA9,HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M03086_2.00 (HOXA9,HOXC5,HOXC6); m=117/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.469905; --------ttTTWATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.4004 14.6154 3.5194 4.32579 28.2054 95.6844 2.71866 6.43318 c 0 0 0 0 0 0 0 0 14.6761 11.0788 1.32908 0.856145 1.40911 0 7.31086 6.87013 g 0 0 0 0 0 0 0 0 24.9254 14.7859 6.03934 0.405542 0.978223 0.125585 4.63293 30.3576 t 0 0 0 0 0 0 0 0 35.9981 59.5199 89.1122 94.4125 69.4072 4.18998 85.3375 56.3391

M03043_2.00_rc_shift8 (FOXD2,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M03043_2.00_rc (FOXD2,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc); m=118/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.469246; --------TRTTTAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 7.77042 26.6631 1.84114 1.61861 5.29334 74.313 1.53925 0 c 0 0 0 0 0 0 0 0 9.84547 1.47835 0 1.01163 0 0 64.6998 0 g 0 0 0 0 0 0 0 0 0 71.8585 0 2.98432 12.3952 15.2927 2.71934 0 t 0 0 0 0 0 0 0 0 82.3841 0 98.1589 94.3854 82.3114 10.3943 31.0416 0

M03773_2.00_shift8 (HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M03773_2.00 (HOXC5,HOXC6); m=119/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.46913; --------kTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.0957 10.4474 0.638503 0.728763 22.5406 99.3089 0.233543 5.72137 c 0 0 0 0 0 0 0 0 9.27583 4.33172 0.215309 0 0.517769 0 3.06525 1.68477 g 0 0 0 0 0 0 0 0 34.5186 10.6868 2.05657 0 0 0 1.26259 36.6758 t 0 0 0 0 0 0 0 0 32.1098 74.5341 97.0896 99.2712 76.9416 0.691069 95.4386 55.9181

M05119_2.00_rc_shift8 (HOXC6,HOXD10_rc)
; oligos_7nt_mkv5_m3 versus M05119_2.00_rc (HOXC6,HOXD10_rc); m=120/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.468041; --------dTTTTATT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 27.5792 0 0.406918 0 8.41908 97.8022 0 0 c 0 0 0 0 0 0 0 0 8.27375 2.08522 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 34.525 9.15684 0 0 0 0 0 22.1781 t 0 0 0 0 0 0 0 0 29.6221 88.7579 99.5931 100 91.5809 2.1978 100 77.8219

M03139_2.00_rc_shift8 (HOXD11_rc)
; oligos_7nt_mkv5_m3 versus M03139_2.00_rc (HOXD11_rc); m=121/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.467755; --------wtTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 29.8701 19.8324 2.90456 1.28755 24.2424 96.6387 0 8.55019 c 0 0 0 0 0 0 0 0 9.95671 7.82123 0 0 0 0 77.1812 0 g 0 0 0 0 0 0 0 0 22.0779 8.10056 1.65975 0 0 0 0 85.5019 t 0 0 0 0 0 0 0 0 38.0952 64.2458 95.4357 98.7124 75.7576 3.36134 22.8188 5.94796

M00394_2.00_shift9 (M00394_2.00)
; oligos_7nt_mkv5_m3 versus M00394_2.00; m=122/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.467723; ---------wtTtayk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 26.8595 16.1909 14.6018 23.7832 61.6295 10.5546 24.0622 c 0 0 0 0 0 0 0 0 0 15.8096 8.45238 11.1467 13.8596 13.0807 32.6735 11.7123 g 0 0 0 0 0 0 0 0 0 20.71 11.64 4.76427 10.4749 14.8967 9.93997 34.8357 t 0 0 0 0 0 0 0 0 0 36.6209 63.7168 69.4873 51.8823 10.3931 46.8319 29.3897

M05085_2.00_rc_shift8 (HOXC12_rc)
; oligos_7nt_mkv5_m3 versus M05085_2.00_rc (HOXC12_rc); m=123/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.46505; --------dTTTTATT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.7143 11.4206 3.54331 5.92593 17.8571 99.1903 0.37037 0 c 0 0 0 0 0 0 0 0 11.4286 6.40669 0 3.33333 0.324675 0 6.66667 8.5044 g 0 0 0 0 0 0 0 0 30.6122 13.9276 0 0 2.27273 0.809717 2.22222 19.6481 t 0 0 0 0 0 0 0 0 32.2449 68.2451 96.4567 90.7407 79.5455 0 90.7407 71.8475

M04979_2.00_shift8 (HOXA13)
; oligos_7nt_mkv5_m3 versus M04979_2.00 (HOXA13); m=124/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.465009; --------kTTTTATT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.1601 7.21393 3.33333 4.05862 3.62401 100 2.23214 8.33333 c 0 0 0 0 0 0 0 0 6.3867 3.56551 0 0 0 0 2.79018 0 g 0 0 0 0 0 0 0 0 44.007 18.6567 2.11111 0 0 0 0 17.0175 t 0 0 0 0 0 0 0 0 30.4462 70.5638 94.5556 95.9414 96.376 0 94.9777 74.6491

M04981_2.00_shift8 (HOXA13)
; oligos_7nt_mkv5_m3 versus M04981_2.00 (HOXA13); m=125/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.464912; --------kTTTTATt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.3556 12.9957 2.13493 0.524476 8.2449 100 1.81818 10.9903 c 0 0 0 0 0 0 0 0 11.5556 5.2471 0 0.786713 0 0 0.865801 0.966184 g 0 0 0 0 0 0 0 0 36.4444 13.1788 1.87874 0.437063 0 0 0 20.1691 t 0 0 0 0 0 0 0 0 27.6444 68.5784 95.9863 98.2517 91.7551 0 97.316 67.8744

M03040_2.00_rc_shift8 (FOXO4_rc)
; oligos_7nt_mkv5_m3 versus M03040_2.00_rc (FOXO4_rc); m=126/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.464648; --------TGTTTAC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.735565 14.9059 0.182548 0.359518 0.298998 90.9214 0 0 c 0 0 0 0 0 0 0 0 0.183891 0.513459 1.64294 0.341542 0.478397 2.07946 76.1756 0 g 0 0 0 0 0 0 0 0 0.183891 83.6782 0 2.62448 18.8219 1.16653 0.184136 0 t 0 0 0 0 0 0 0 0 98.8967 0.902443 98.1745 96.6745 80.4007 5.83263 23.6402 0

M03026_2.00_rc_shift8 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI1,FOXI2,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M03026_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI1,FOXI2,FOXI3,FOXS1_rc); m=127/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.463342; --------TGTTTAC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 13.0856 1.24693 0 0 96.8376 0 0 c 0 0 0 0 0 0 0 0 0.479662 0.775444 0.547893 0 0.643255 0.65494 88.7346 0 g 0 0 0 0 0 0 0 0 0.230238 83.6026 0.434536 0.442478 9.38804 1.12275 0.668724 0 t 0 0 0 0 0 0 0 0 99.2901 2.53635 97.7706 99.5575 89.9687 1.38473 10.5967 0

M03209_2.00_shift9 (HOXD12)
; oligos_7nt_mkv5_m3 versus M03209_2.00 (HOXD12); m=128/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.46222; ---------tTTWATy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 14.3561 3.03176 5.66319 26.1533 88.7271 1.20037 0 c 0 0 0 0 0 0 0 0 0 12.2304 1.49182 0 3.55975 2.0667 7.84857 26.8308 g 0 0 0 0 0 0 0 0 0 15.2187 4.5717 0.496771 1.6709 0.892438 3.73961 12.7598 t 0 0 0 0 0 0 0 0 0 58.1947 90.9047 93.84 68.6161 8.31376 87.2114 60.4093

M00008_2.00_rc_shift6 (M00008_2.00_rc)
; oligos_7nt_mkv5_m3 versus M00008_2.00_rc; m=129/241; ncol2=7; w=0; offset=1; strand=R; shift=6; score=0.462141; ------wwttwwt--- ; cor=; Ncor= a 0 0 0 0 0 0 42.9198 45.8058 21.8294 20.3138 30.0157 26.1864 22.2583 0 0 0 c 0 0 0 0 0 0 11.2384 8.20227 6.31709 11.1484 20.9413 23.6944 24.5993 0 0 0 g 0 0 0 0 0 0 13.7266 13.3887 4.27703 6.89847 11.2652 18.4532 24.8465 0 0 0 t 0 0 0 0 0 0 32.1153 32.6032 67.5764 61.6393 37.7778 31.6659 28.2959 0 0 0

M09149_2.00_shift9 (HOXB13)
; oligos_7nt_mkv5_m3 versus M09149_2.00 (HOXB13); m=130/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.461938; ---------TTTTATd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 6.8 1 0 1.4 94.4 2.4 26.2 c 0 0 0 0 0 0 0 0 0 10.8 0.6 0.4 2.4 2.2 10 1 g 0 0 0 0 0 0 0 0 0 10 1.8 0.2 2.6 3.4 0.2 32.4 t 0 0 0 0 0 0 0 0 0 72.4 96.6 99.4 93.6 0 87.4 40.4

M00298_2.00_shift9 (HOXD13)
; oligos_7nt_mkv5_m3 versus M00298_2.00 (HOXD13); m=131/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.461761; ---------tTTwAyd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 24.6046 11.8286 12.6973 29.5284 90.579 5.48617 30.326 c 0 0 0 0 0 0 0 0 0 14.4824 4.01695 5.11095 6.08211 0.0332474 28.0007 6.76664 g 0 0 0 0 0 0 0 0 0 20.347 8.17044 3.03857 4.32907 6.2728 2.29844 29.7255 t 0 0 0 0 0 0 0 0 0 40.5661 75.984 79.1532 60.0605 3.11498 64.2146 33.1819

M03248_2.00_shift8 (M03248_2.00)
; oligos_7nt_mkv5_m3 versus M03248_2.00; m=132/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.460565; --------dtTTTAyk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.737 15.4627 2.64523 2.19171 20.4086 99.865 0.697987 12.0983 c 0 0 0 0 0 0 0 0 10.1108 7.04061 1.06328 0 0.595871 0.0809935 59.3557 1.12468 g 0 0 0 0 0 0 0 0 35.0906 15.9288 0.363071 0.132031 0.276655 0.0539957 0 59.4312 t 0 0 0 0 0 0 0 0 28.0616 61.5679 95.9284 97.6763 78.7189 0 39.9463 27.3458

M03115_2.00_shift9 (CDX1)
; oligos_7nt_mkv5_m3 versus M03115_2.00 (CDX1); m=133/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.460288; ---------tTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 17.4682 6.10065 8.15551 13.0443 99.5705 0.722727 8.14506 c 0 0 0 0 0 0 0 0 0 13.554 2.39903 0.760012 1.00548 0 7.3933 1.9296 g 0 0 0 0 0 0 0 0 0 18.8376 4.59188 0.721037 2.69324 0.128838 1.30872 38.8151 t 0 0 0 0 0 0 0 0 0 50.1402 86.9084 90.3634 83.257 0.300623 90.5753 51.1102

M00473_2.00_shift9 (M00473_2.00)
; oligos_7nt_mkv5_m3 versus M00473_2.00; m=134/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.459979; ---------tTTwAyd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 24.449 12.4284 12.3768 27.1565 80.9605 7.64758 25.0689 c 0 0 0 0 0 0 0 0 0 16.0642 6.17177 5.96448 7.78047 1.94247 38.2594 6.7641 g 0 0 0 0 0 0 0 0 0 21.9023 10.5908 3.72782 5.82184 9.06083 3.47082 38.154 t 0 0 0 0 0 0 0 0 0 37.5845 70.809 77.9309 59.2412 8.03624 50.6222 30.013

M02719_2.00_rc_shift7 (SOX1_rc)
; oligos_7nt_mkv5_m3 versus M02719_2.00_rc (SOX1_rc); m=135/241; ncol2=7; w=0; offset=2; strand=R; shift=7; score=0.459808; -------ATTGTTw-- ; cor=; Ncor= a 0 0 0 0 0 0 0 100 0 0 4.34783 0 4.34783 34.7826 0 0 c 0 0 0 0 0 0 0 0 0 0 0 4.34783 4.34783 13.0435 0 0 g 0 0 0 0 0 0 0 0 4.34783 0 95.6522 0 0 17.3913 0 0 t 0 0 0 0 0 0 0 0 95.6522 100 0 95.6522 91.3043 34.7826 0 0

M05341_2.00_shift8 (HOXC10,HOXC6)
; oligos_7nt_mkv5_m3 versus M05341_2.00 (HOXC10,HOXC6); m=136/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.45973; --------gTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 23.515 2.8028 0 0 5.85334 95.497 0 0 c 0 0 0 0 0 0 0 0 11.4605 0 0 0.173974 0 0 0 0 g 0 0 0 0 0 0 0 0 45.5276 1.66834 0 0.208768 0 0 0 32.5877 t 0 0 0 0 0 0 0 0 19.4969 95.5289 100 99.6173 94.1467 4.503 100 67.4123

M05083_2.00_rc_shift8 (HOXC12_rc)
; oligos_7nt_mkv5_m3 versus M05083_2.00_rc (HOXC12_rc); m=137/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.459615; --------rtTTTATT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.4145 13.6819 0 0 16.1905 99.509 0 0.950119 c 0 0 0 0 0 0 0 0 13.9803 8.45384 0 0 0 0 13.5135 5.70071 g 0 0 0 0 0 0 0 0 31.25 10.2336 0.977199 0 1.08844 0.490998 0 21.1401 t 0 0 0 0 0 0 0 0 23.3553 67.6307 99.0228 100 82.7211 0 86.4865 72.209

M05076_2.00_shift8 (HOXC11)
; oligos_7nt_mkv5_m3 versus M05076_2.00 (HOXC11); m=138/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.458929; --------dtTTWATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.0335 17.0621 1.83968 0.400712 26.0798 99.9107 0 4.68412 c 0 0 0 0 0 0 0 0 16.1824 7.23164 0 0 0 0 11.8275 3.32612 g 0 0 0 0 0 0 0 0 32.4989 12.5141 0.175208 0 0.719895 0.0893256 2.82335 47.963 t 0 0 0 0 0 0 0 0 26.2852 63.1921 97.9851 99.5993 73.2003 0 85.3491 44.0268

M03230_2.00_shift8 (HOXC10,HOXC6)
; oligos_7nt_mkv5_m3 versus M03230_2.00 (HOXC10,HOXC6); m=139/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.458551; --------wtTTwAyG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 33.9975 19.9329 5.25281 3.07136 32.5054 99.1662 0.408233 4.11924 c 0 0 0 0 0 0 0 0 14.1034 9.91982 2.41573 0.150557 0.124185 0 54.6181 0.325203 g 0 0 0 0 0 0 0 0 21.1395 10.2741 2.13483 0.0903342 0.155231 0 0.102058 87.019 t 0 0 0 0 0 0 0 0 30.7597 59.8732 90.1966 96.6877 67.2152 0.833848 44.8716 8.53659

M10761_2.00_rc_shift9 (NKX2-6_rc)
; oligos_7nt_mkv5_m3 versus M10761_2.00_rc (NKX2-6_rc); m=140/241; ncol2=7; w=0; offset=4; strand=R; shift=9; score=0.458448; ---------mTTTatr ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 47.3684 21.0526 5.26316 21.0526 57.8947 21.0526 31.5789 c 0 0 0 0 0 0 0 0 0 31.5789 0 0 0 15.7895 15.7895 15.7895 g 0 0 0 0 0 0 0 0 0 10.5263 5.26316 0 10.5263 21.0526 10.5263 47.3684 t 0 0 0 0 0 0 0 0 0 10.5263 73.6842 94.7368 68.4211 5.26316 52.6316 5.26316

M09102_2.00_rc_shift1 (FOXI2,FOXI3,FOXP4_rc)
; oligos_7nt_mkv5_m3 versus M09102_2.00_rc (FOXI2,FOXI3,FOXP4_rc); m=141/241; ncol2=13; w=-4; offset=-4; strand=R; shift=1; score=0.45827; -tTGTTTATkkTTw-- ; cor=; Ncor= a 0 19.4096 0 8.29351 0.107382 0 0.883421 81.8242 0 11.3282 4.40217 5.27816 0.586565 35.8521 0 0 c 0 14.6471 0 0 0 0 0 0 7.11126 0 0 0 1.01355 7.03788 0 0 g 0 16.469 0 91.438 0 0 17.5693 3.69269 0 43.021 32.5679 2.91214 1.68075 13.8458 0 0 t 0 49.4743 100 0.268455 99.8926 100 81.5473 14.4831 92.8887 45.6508 63.0299 91.8097 96.7191 43.2642 0 0

M09098_2.00_rc_shift1 (FOXI2,FOXI3,FOXJ3_rc)
; oligos_7nt_mkv5_m3 versus M09098_2.00_rc (FOXI2,FOXI3,FOXJ3_rc); m=142/241; ncol2=13; w=-4; offset=-4; strand=R; shift=1; score=0.45827; -tTGTTTATkkTTw-- ; cor=; Ncor= a 0 19.4096 0 8.29351 0.107382 0 0.883421 81.8242 0 11.3282 4.40217 5.27816 0.586565 35.8521 0 0 c 0 14.6471 0 0 0 0 0 0 7.11126 0 0 0 1.01355 7.03788 0 0 g 0 16.469 0 91.438 0 0 17.5693 3.69269 0 43.021 32.5679 2.91214 1.68075 13.8458 0 0 t 0 49.4743 100 0.268455 99.8926 100 81.5473 14.4831 92.8887 45.6508 63.0299 91.8097 96.7191 43.2642 0 0

M05106_2.00_shift8 (HOXC5,HOXC6,HOXD9)
; oligos_7nt_mkv5_m3 versus M05106_2.00 (HOXC5,HOXC6,HOXD9); m=143/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.458169; --------gtTTwATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.5111 16.6242 3.35229 4.05666 28.7304 98.1518 0.812568 5.09129 c 0 0 0 0 0 0 0 0 21.0491 15.6383 1.25711 0 1.88508 0 10.5092 1.63272 g 0 0 0 0 0 0 0 0 43.3759 17.1851 6.37534 0.193175 1.83965 0 8.12568 41.0639 t 0 0 0 0 0 0 0 0 15.0639 50.5524 89.0153 95.7502 67.5449 1.84818 80.5525 52.2121

M03012_2.00_rc_shift8 (FOXP3_rc)
; oligos_7nt_mkv5_m3 versus M03012_2.00_rc (FOXP3_rc); m=144/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.458087; --------TGTTTAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 13.8298 0 3.50877 12.8099 74.5583 0 0 c 0 0 0 0 0 0 0 0 7.86026 11.3475 17.8182 3.94737 0 0 64.9289 0 g 0 0 0 0 0 0 0 0 0 74.8227 5.45455 0 0 18.3746 0 0 t 0 0 0 0 0 0 0 0 92.1397 0 76.7273 92.5439 87.1901 7.06714 35.0711 0

M05080_2.00_shift8 (HOXC11)
; oligos_7nt_mkv5_m3 versus M05080_2.00 (HOXC11); m=145/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.45679; --------ktTTwATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.6981 17.2757 1.62162 3.98551 28.0813 99.4361 0.446429 5.96546 c 0 0 0 0 0 0 0 0 16.9811 6.97674 2.16216 0.181159 0 0.56391 13.9881 4.23862 g 0 0 0 0 0 0 0 0 34.3396 17.165 0.900901 0 4.7014 0 6.84524 48.2732 t 0 0 0 0 0 0 0 0 26.9811 58.5825 95.3153 95.8333 67.2173 0 78.7202 41.5228

M05339_2.00_shift8 (HOXC10,HOXC6)
; oligos_7nt_mkv5_m3 versus M05339_2.00 (HOXC10,HOXC6); m=146/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.45671; --------rTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.7716 7.89438 0 0 11.6899 98.9649 0 0 c 0 0 0 0 0 0 0 0 13.9918 4.27051 0 0 0 0 0.630431 0 g 0 0 0 0 0 0 0 0 38.4259 9.26849 0 0 0 0 0 36.0386 t 0 0 0 0 0 0 0 0 21.8107 78.5666 100 100 88.3101 1.03513 99.3696 63.9614

M05397_2.00_shift8 (HOXA10,HOXC6)
; oligos_7nt_mkv5_m3 versus M05397_2.00 (HOXA10,HOXC6); m=147/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.455156; --------gTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.6936 10.5779 0 1.06914 15.9485 94.6758 0 1.73934 c 0 0 0 0 0 0 0 0 13.951 5.27572 0 0.0712758 0.867744 0 0.537827 0.476531 g 0 0 0 0 0 0 0 0 37.0584 10.6045 0.644699 0 0.179533 0 0 31.6893 t 0 0 0 0 0 0 0 0 24.297 73.5419 99.3553 98.8596 83.0042 5.32423 99.4622 66.0948

M03085_2.00_shift7 (HOXA9,HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M03085_2.00 (HOXA9,HOXC5,HOXC6); m=148/241; ncol2=12; w=0; offset=2; strand=D; shift=7; score=0.454953; -------wwtTTWAyG ; cor=; Ncor= a 0 0 0 0 0 0 0 31.4617 29.9844 20.4436 5.00308 2.09424 28.1015 99.1385 0.551181 3.19527 c 0 0 0 0 0 0 0 21.2344 16.0392 9.31608 0.51261 0 0.441501 0 58.8976 0.0788955 g 0 0 0 0 0 0 0 20.41 23.2346 14.9353 2.46053 0 0.507726 0 0.0918635 88.5207 t 0 0 0 0 0 0 0 26.8939 30.7418 55.305 92.0238 97.9058 70.9492 0.861498 40.4593 8.20513

M04898_2.00_shift8 (HOXA11)
; oligos_7nt_mkv5_m3 versus M04898_2.00 (HOXA11); m=149/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.454754; --------dtTTtATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.7406 18.9453 1.25 3.28947 24.9428 100 2.04604 4.46043 c 0 0 0 0 0 0 0 0 9.21502 10.1562 0 0 4.11899 0 18.4143 7.76978 g 0 0 0 0 0 0 0 0 33.7884 13.8672 7.5 0.657895 4.11899 0 4.85934 45.7554 t 0 0 0 0 0 0 0 0 25.256 57.0312 91.25 96.0526 66.8192 0 74.6803 42.0144

M03050_2.00_rc_shift8 (FOXO6,FOXP4_rc)
; oligos_7nt_mkv5_m3 versus M03050_2.00_rc (FOXO6,FOXP4_rc); m=150/241; ncol2=7; w=0; offset=3; strand=R; shift=8; score=0.454293; --------TGTTTAC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 5.17404 0 0.358819 0 97.4206 0 0 c 0 0 0 0 0 0 0 0 0.184712 0.416611 0 0 0.085585 0.443766 82.9398 0 g 0 0 0 0 0 0 0 0 0 94.4094 0 2.69114 14.0237 0 0 0 t 0 0 0 0 0 0 0 0 99.8153 0 100 96.95 85.8907 2.13563 17.0602 0

M05078_2.00_shift8 (HOXC11)
; oligos_7nt_mkv5_m3 versus M05078_2.00 (HOXC11); m=151/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.454123; --------ktTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.9481 16.84 0.865266 0.25413 23.6538 100 0.29274 5.92718 c 0 0 0 0 0 0 0 0 14.8623 5.4 0.123609 0.508259 0 0 7.37705 1.35478 g 0 0 0 0 0 0 0 0 37.476 15.28 2.47219 0 1.25 0 0.87822 48.6311 t 0 0 0 0 0 0 0 0 26.7136 62.48 96.5389 99.2376 75.0962 0 91.452 44.0869

M00299_2.00_shift9 (HOXD13)
; oligos_7nt_mkv5_m3 versus M00299_2.00 (HOXD13); m=152/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.453798; ---------ttTwAyd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 24.6631 14.6319 16.2793 26.8819 85.0146 7.10144 27.3384 c 0 0 0 0 0 0 0 0 0 17.0357 6.91164 6.48759 11.2622 0.164117 34.4772 8.48494 g 0 0 0 0 0 0 0 0 0 21.8742 12.2216 2.80076 6.62898 9.80432 5.42109 32.73 t 0 0 0 0 0 0 0 0 0 36.427 66.2348 74.4324 55.227 5.01695 53.0003 31.4466

M09084_2.00_rc_shift8 (FOXI2,FOXI3,FOXJ2_rc)
; oligos_7nt_mkv5_m3 versus M09084_2.00_rc (FOXI2,FOXI3,FOXJ2_rc); m=153/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.453388; --------TrTTTrTt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.8707 0 0 0 54.8813 0 11.8734 c 0 0 0 0 0 0 0 0 2.37467 0 0 0 0 0 19.2612 21.6359 g 0 0 0 0 0 0 0 0 0 64.3799 2.37467 0 0 45.1187 0 0 t 0 0 0 0 0 0 0 0 97.6253 4.74934 97.6253 100 100 0 80.7388 66.4908

M09100_2.00_rc_shift8 (FOXI2,FOXI3_rc)
; oligos_7nt_mkv5_m3 versus M09100_2.00_rc (FOXI2,FOXI3_rc); m=154/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.453388; --------TrTTTrTt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.8707 0 0 0 54.8813 0 11.8734 c 0 0 0 0 0 0 0 0 2.37467 0 0 0 0 0 19.2612 21.6359 g 0 0 0 0 0 0 0 0 0 64.3799 2.37467 0 0 45.1187 0 0 t 0 0 0 0 0 0 0 0 97.6253 4.74934 97.6253 100 100 0 80.7388 66.4908

M03274_2.00_shift7 (M03274_2.00)
; oligos_7nt_mkv5_m3 versus M03274_2.00; m=155/241; ncol2=12; w=0; offset=2; strand=D; shift=7; score=0.452971; -------awtTTwAYG ; cor=; Ncor= a 0 0 0 0 0 0 0 48.7216 29.9716 16.7375 5.16796 4.20624 29.8611 97.5069 0.726895 4.67532 c 0 0 0 0 0 0 0 15.9091 21.3068 9.94053 0.387597 0.27137 1.80556 0.415512 73.1049 0 g 0 0 0 0 0 0 0 15.625 23.2955 13.5089 3.48837 0 0.416667 0.138504 0.207684 91.4286 t 0 0 0 0 0 0 0 19.7443 25.4261 59.8131 90.9561 95.5224 67.9167 1.93906 25.9605 3.8961

M03275_2.00_shift8 (M03275_2.00)
; oligos_7nt_mkv5_m3 versus M03275_2.00; m=156/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.452939; --------dtTTwATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 28.7129 13.0986 0.227273 5.38642 37.2922 93.0876 0.178891 3.23974 c 0 0 0 0 0 0 0 0 17.8218 10.7042 0.909091 0 0.950119 0 10.9123 8.09935 g 0 0 0 0 0 0 0 0 25.2475 19.2958 7.04545 0 3.32542 0 16.6369 45.0324 t 0 0 0 0 0 0 0 0 28.2178 56.9014 91.8182 94.6136 58.4323 6.91244 72.2719 43.6285

M05201_2.00_shift8 (HOXB13)
; oligos_7nt_mkv5_m3 versus M05201_2.00 (HOXB13); m=157/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.451362; --------gTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 22.3602 6.94981 0 0.0775795 1.52905 100 0.231422 8.94056 c 0 0 0 0 0 0 0 0 8.46273 3.35907 0.129232 0 0 0 0.411417 0.294744 g 0 0 0 0 0 0 0 0 52.3551 15.0965 0 0 0 0 0 27.493 t 0 0 0 0 0 0 0 0 16.8219 74.5946 99.8708 99.9224 98.4709 0 99.3572 63.2717

M00796_2.00_rc_shift8 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M00796_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXS1_rc); m=158/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.451326; --------TrTTkayw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11.0835 32.3871 7.97426 8.346 11.1071 56.2548 7.58821 30.8572 c 0 0 0 0 0 0 0 0 6.85832 5.19533 8.99096 5.11298 4.89193 5.81181 43.2326 20.8921 g 0 0 0 0 0 0 0 0 7.20995 56.1351 5.8487 9.69667 28.4341 16.6081 10.4499 19.4796 t 0 0 0 0 0 0 0 0 74.8482 6.28246 77.1861 76.8444 55.5669 21.3252 38.7293 28.7711

M00295_2.00_shift9 (HOXD13)
; oligos_7nt_mkv5_m3 versus M00295_2.00 (HOXD13); m=159/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.451281; ---------ttTwAyd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 24.5248 14.8915 16.1116 27.0247 86.3064 6.93706 26.9029 c 0 0 0 0 0 0 0 0 0 17.2823 7.62011 6.35689 10.9874 1.11394 33.344 8.34976 g 0 0 0 0 0 0 0 0 0 21.9702 12.0708 3.12533 6.46726 9.09663 4.74399 32.8592 t 0 0 0 0 0 0 0 0 0 36.2227 65.4176 74.4062 55.5205 3.48303 54.975 31.8881

M03101_2.00_rc_shift8 (HOXA13_rc)
; oligos_7nt_mkv5_m3 versus M03101_2.00_rc (HOXA13_rc); m=160/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.451234; --------kTTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 22 14.5363 0 0 6.52174 94.9367 1.39276 16.4345 c 0 0 0 0 0 0 0 0 10.6667 7.76942 0 0 0 0 83.5655 0 g 0 0 0 0 0 0 0 0 26 2.50627 0 0 0.310559 0.949367 1.67131 83.5655 t 0 0 0 0 0 0 0 0 41.3333 75.188 100 100 93.1677 4.11392 13.3705 0

M05337_2.00_shift8 (HOXC10,HOXC6)
; oligos_7nt_mkv5_m3 versus M05337_2.00 (HOXC10,HOXC6); m=161/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.45076; --------gTTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.5214 7.38383 0 0 9.30587 97.8601 0 0 c 0 0 0 0 0 0 0 0 20.6056 3.50095 0.167926 0 0 0 0 0.152207 g 0 0 0 0 0 0 0 0 40.286 13.4309 0 0.668338 0 0 0 39.5231 t 0 0 0 0 0 0 0 0 18.587 75.6843 99.8321 99.3317 90.6941 2.13992 100 60.3247

M06223_2.00_shift9 (M06223_2.00)
; oligos_7nt_mkv5_m3 versus M06223_2.00; m=162/241; ncol2=8; w=0; offset=4; strand=D; shift=9; score=0.449424; ---------wTTwATT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 31.5789 7.89474 10.5263 31.5789 100 0 10.5263 c 0 0 0 0 0 0 0 0 0 15.7895 7.89474 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 10.5263 7.89474 0 5.26316 0 0 18.4211 t 0 0 0 0 0 0 0 0 0 42.1053 76.3158 89.4737 63.1579 0 100 71.0526

M03282_2.00_shift9 (HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M03282_2.00 (HOXC5,HOXC6); m=163/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.449174; ---------tTTwATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 3.46535 14.1129 4.43548 32.7536 93.5185 9.57447 0 c 0 0 0 0 0 0 0 0 0 15.3465 0 0 0 0 18.7943 1.94805 g 0 0 0 0 0 0 0 0 0 14.3564 4.43548 14.1129 8.69565 6.48148 0 65.5844 t 0 0 0 0 0 0 0 0 0 66.8317 81.4516 81.4516 58.5507 0 71.6312 32.4675

M04900_2.00_shift8 (HOXA11)
; oligos_7nt_mkv5_m3 versus M04900_2.00 (HOXA11); m=164/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.44906; --------rtTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 37.0588 12.5448 3.8674 2.85714 19.8113 100 2.55102 2.6087 c 0 0 0 0 0 0 0 0 11.7647 17.5627 0 0 0 0 10.7143 3.47826 g 0 0 0 0 0 0 0 0 30.5882 8.96057 2.20994 0 0 0 0 44.6377 t 0 0 0 0 0 0 0 0 20.5882 60.9319 93.9227 97.1429 80.1887 0 86.7347 49.2754

M05124_2.00_shift8 (HOXD13)
; oligos_7nt_mkv5_m3 versus M05124_2.00 (HOXD13); m=165/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.448676; --------gtTTTATT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.8246 15.99 2.63852 1.10957 12.3321 100 3.53569 10.0349 c 0 0 0 0 0 0 0 0 8.77193 3.9347 0.395778 0 0.610501 0 1.33422 0 g 0 0 0 0 0 0 0 0 45.5439 20.3851 2.90237 0 0 0 0 18.7718 t 0 0 0 0 0 0 0 0 23.8596 59.6902 94.0633 98.8904 87.0574 0 95.1301 71.1932

M03284_2.00_shift9 (HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M03284_2.00 (HOXC5,HOXC6); m=166/241; ncol2=9; w=0; offset=4; strand=D; shift=9; score=0.448533; ---------tTTWAyG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 15.2941 0 5.34759 25.4386 83.7438 4.26357 17.4274 c 0 0 0 0 0 0 0 0 0 12.3529 0 1.60428 0 9.35961 65.8915 0 g 0 0 0 0 0 0 0 0 0 16.4706 3.9548 2.13904 0 3.44828 2.71318 70.5394 t 0 0 0 0 0 0 0 0 0 55.8824 96.0452 90.9091 74.5614 3.44828 27.1318 12.0332

M01982_2.00_rc_shift8 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M01982_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1_rc); m=167/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.448356; --------TrTTkayw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 12.9996 29.6601 9.61432 10.0543 10.9388 54.0882 8.3516 31.3657 c 0 0 0 0 0 0 0 0 9.82488 5.25827 10.5197 7.67525 8.77857 8.00941 46.1757 20.8158 g 0 0 0 0 0 0 0 0 7.42549 55.6901 8.11126 10.8917 27.1754 18.0044 9.51104 19.9996 t 0 0 0 0 0 0 0 0 69.75 9.39148 71.7547 71.3788 53.1072 19.8979 35.9617 27.8189

M08264_2.00_shift0 (ZNF250)
; oligos_7nt_mkv5_m3 versus M08264_2.00 (ZNF250); m=168/241; ncol2=15; w=-5; offset=-5; strand=D; shift=0; score=0.44734; yskTGCAmTTTTtky- ; cor=; Ncor= a 6.772 24.1136 23.1186 4.1401 4.843 6.3428 80.6669 49.0867 9.7772 9.2487 6.0683 4.7969 8.8516 22.6415 12.4046 0 c 40.6685 41.3352 3.4385 9.0666 4.3396 84.4506 3.2184 25.6044 3.0187 1.4353 6.9298 11.7032 17.6487 20.6044 34.122 0 g 13.404 28.5453 28.3133 11.2185 86.4813 4.0122 13.1469 7.734 5.2103 1.8085 1.3468 3.1771 14.6437 25.0427 24.4656 0 t 39.1556 6.006 45.1295 75.5747 4.3361 5.1943 2.9678 17.5748 81.9938 87.5075 85.6551 80.3227 58.8561 31.7114 29.0079 0

M09545_2.00_rc_shift8 (FOXA1_rc)
; oligos_7nt_mkv5_m3 versus M09545_2.00_rc (FOXA1_rc); m=169/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.446756; --------TRTTTACw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.1 28.4 0.1 0.1 0.1 84.5 0.1 30.7 c 0 0 0 0 0 0 0 0 0.1 0.1 0.1 0.1 0.1 0.1 88.4 9.6 g 0 0 0 0 0 0 0 0 0.1 71.4 0.1 1.3 6.7 15.3 0.1 0.1 t 0 0 0 0 0 0 0 0 99.7 0.1 99.7 98.5 93.1 0.1 11.4 59.6

M05105_2.00_rc_shift8 (HOXC5,HOXC6,HOXD9_rc)
; oligos_7nt_mkv5_m3 versus M05105_2.00_rc (HOXC5,HOXC6,HOXD9_rc); m=170/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.446246; --------dtTTTAYG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.0438 16.9129 1.65127 0.653214 16.4016 100 0 0 c 0 0 0 0 0 0 0 0 12.5631 8.0946 0 0 0 0 68.3657 0.0938416 g 0 0 0 0 0 0 0 0 30.3041 11.4518 0 0 0 0 0 99.9062 t 0 0 0 0 0 0 0 0 26.089 63.5407 98.3487 99.3468 83.5984 0 31.6343 0

M06476_2.00_shift10 (HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M06476_2.00 (HOXC5,HOXC6); m=171/241; ncol2=7; w=0; offset=5; strand=D; shift=10; score=0.445434; ----------TTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 4.7619 0 23.8095 100 0 14.2857 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14.2857 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52.381 t 0 0 0 0 0 0 0 0 0 0 95.2381 100 76.1905 0 85.7143 33.3333

M04983_2.00_shift8 (HOXA13)
; oligos_7nt_mkv5_m3 versus M04983_2.00 (HOXA13); m=172/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.444448; --------rkTTTATT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.0204 3.58056 0 0 16.3823 100 0 18.209 c 0 0 0 0 0 0 0 0 10.6122 7.92839 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 40.8163 25.8312 2 0 0 0 7.89474 8.65672 t 0 0 0 0 0 0 0 0 17.551 62.6598 98 100 83.6177 0 92.1053 73.1343

M05082_2.00_shift8 (HOXC11)
; oligos_7nt_mkv5_m3 versus M05082_2.00 (HOXC11); m=173/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.444425; --------dtTTwAyk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.3425 18.0534 4.16667 11.5502 34.6369 98.9796 2.1097 4.02299 c 0 0 0 0 0 0 0 0 16.0959 17.1115 1.66667 0 2.7933 0 27.6371 6.89655 g 0 0 0 0 0 0 0 0 26.0274 19.1523 13.3333 0 8.37989 1.02041 8.86076 47.2701 t 0 0 0 0 0 0 0 0 32.5342 45.6829 80.8333 88.4498 54.1899 0 61.3924 41.8103

M03140_2.00_shift9 (HOXD11)
; oligos_7nt_mkv5_m3 versus M03140_2.00 (HOXD11); m=174/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.443358; ---------tTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 9.7561 4.23729 2.6087 24.8366 84.6774 5.88235 2.9703 c 0 0 0 0 0 0 0 0 0 12.8049 4.23729 5.21739 2.61438 3.22581 11.0294 5.44554 g 0 0 0 0 0 0 0 0 0 13.4146 2.54237 0.869565 3.92157 5.64516 5.88235 39.604 t 0 0 0 0 0 0 0 0 0 64.0244 88.9831 91.3043 68.6275 6.45161 77.2059 51.9802

M09543_2.00_rc_shift8 (FOXA1_rc)
; oligos_7nt_mkv5_m3 versus M09543_2.00_rc (FOXA1_rc); m=175/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.442854; --------TGTTTACw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.1 22.3 0.1 0.1 0.1 84.6 0.1 31.3 c 0 0 0 0 0 0 0 0 0.1 0.1 0.1 0.1 0.1 0.1 87 11.1 g 0 0 0 0 0 0 0 0 0.1 77.5 0.1 2.9 10.5 15.2 0.1 0.2 t 0 0 0 0 0 0 0 0 99.7 0.1 99.7 96.9 89.3 0.1 12.8 57.5

M01983_2.00_shift8 (FOXB2)
; oligos_7nt_mkv5_m3 versus M01983_2.00 (FOXB2); m=176/241; ncol2=10; w=0; offset=3; strand=D; shift=8; score=0.442836; --------TrTTtACw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10.2112 36.2449 5.42313 7.09827 5.85288 74.04 5.58926 50.6065 c 0 0 0 0 0 0 0 0 6.70923 5.87261 4.3959 6.61838 7.00717 3.2694 70.1648 12.8595 g 0 0 0 0 0 0 0 0 5.33071 51.9509 3.63523 13.3278 23.2646 15.5585 3.32293 8.19955 t 0 0 0 0 0 0 0 0 77.7489 5.93163 86.5457 72.9556 63.8753 7.1321 20.923 28.3345

M09186_2.00_rc_shift9 (M09186_2.00_rc)
; oligos_7nt_mkv5_m3 versus M09186_2.00_rc; m=177/241; ncol2=8; w=0; offset=4; strand=R; shift=9; score=0.439741; ---------aTTTAtG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 46.595 3.22581 3.22581 6.45161 80.6452 24.7312 20.6093 c 0 0 0 0 0 0 0 0 0 24.3728 0 0 5.37634 0 9.319 0 g 0 0 0 0 0 0 0 0 0 4.83871 9.67742 3.22581 12.9032 16.129 3.22581 79.3907 t 0 0 0 0 0 0 0 0 0 24.1935 87.0968 93.5484 75.2688 3.22581 62.724 0

M09140_2.00_rc_shift9 (CDX1_rc)
; oligos_7nt_mkv5_m3 versus M09140_2.00_rc (CDX1_rc); m=178/241; ncol2=8; w=0; offset=4; strand=R; shift=9; score=0.439741; ---------aTTTAtG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 46.595 3.22581 3.22581 6.45161 80.6452 24.7312 20.6093 c 0 0 0 0 0 0 0 0 0 24.3728 0 0 5.37634 0 9.319 0 g 0 0 0 0 0 0 0 0 0 4.83871 9.67742 3.22581 12.9032 16.129 3.22581 79.3907 t 0 0 0 0 0 0 0 0 0 24.1935 87.0968 93.5484 75.2688 3.22581 62.724 0

M06225_2.00_shift9 (M06225_2.00)
; oligos_7nt_mkv5_m3 versus M06225_2.00; m=179/241; ncol2=8; w=0; offset=4; strand=D; shift=9; score=0.438846; ---------tTTwATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 24.3662 9.01408 12.6761 44.9296 100 0 14.4366 c 0 0 0 0 0 0 0 0 0 17.3239 9.50704 1.05634 0.704225 0 8.4507 1.19718 g 0 0 0 0 0 0 0 0 0 21.831 8.16901 0.422535 3.59155 0 2.32394 27.9577 t 0 0 0 0 0 0 0 0 0 36.4789 73.3099 85.8451 50.7746 0 89.2254 56.4085

M04977_2.00_shift8 (HOXA13)
; oligos_7nt_mkv5_m3 versus M04977_2.00 (HOXA13); m=180/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.438835; --------gTTTTATK ; cor=; Ncor= a 0 0 0 0 0 0 0 0 15.52 6.22627 0 0 0 100 0 0 c 0 0 0 0 0 0 0 0 8.16 2.73349 0 0.104712 1.75077 0 0 0 g 0 0 0 0 0 0 0 0 60.64 18.6029 0 0 0 0 0 29.2285 t 0 0 0 0 0 0 0 0 15.68 72.4374 100 99.8953 98.2492 0 100 70.7715

M05331_2.00_rc_shift8 (HOXC5,HOXC6,HOXC9_rc)
; oligos_7nt_mkv5_m3 versus M05331_2.00_rc (HOXC5,HOXC6,HOXC9_rc); m=181/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.438631; --------rTTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 32.5397 15.7511 0 0 11.8741 99.8651 0 0 c 0 0 0 0 0 0 0 0 14.0982 6.07624 0 0 0 0.070685 78.5256 0 g 0 0 0 0 0 0 0 0 32.411 9.04319 0.0771555 0 0 0.0321295 0 100 t 0 0 0 0 0 0 0 0 20.951 69.1295 99.9228 100 88.1259 0.0321295 21.4744 0

M02524_2.00_rc_shift9 (LIN54_rc)
; oligos_7nt_mkv5_m3 versus M02524_2.00_rc (LIN54_rc); m=182/241; ncol2=9; w=0; offset=4; strand=R; shift=9; score=0.437183; ---------wTTTAAA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 33.2237 0.247525 0.198413 0.165563 82.947 99.5033 99.5033 c 0 0 0 0 0 0 0 0 0 0.328947 0.247525 0.198413 16.7219 0.165563 0.165563 0.165563 g 0 0 0 0 0 0 0 0 0 0.328947 0.247525 0.198413 0.165563 16.7219 0.165563 0.165563 t 0 0 0 0 0 0 0 0 0 66.1184 99.2574 99.4048 82.947 0.165563 0.165563 0.165563

M05335_2.00_shift8 (HOXC10,HOXC6)
; oligos_7nt_mkv5_m3 versus M05335_2.00 (HOXC10,HOXC6); m=183/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.437044; --------gtTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.8 13.3747 0 0 22.471 100 1.51246 3.4 c 0 0 0 0 0 0 0 0 17.5 10.4966 0.575264 0 0.15444 0 5.78292 2.65 g 0 0 0 0 0 0 0 0 43.8 19.6953 3.54746 0 0.15444 0 3.73665 43.95 t 0 0 0 0 0 0 0 0 16.9 56.4334 95.8773 100 77.2201 0 88.968 50

M05289_2.00_rc_shift8 (HOXB9,HOXC5,HOXC6_rc)
; oligos_7nt_mkv5_m3 versus M05289_2.00_rc (HOXB9,HOXC5,HOXC6_rc); m=184/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.434736; --------atTTTAYG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 38.3279 17.2096 0.894266 0 19.9224 99.9457 0 0 c 0 0 0 0 0 0 0 0 14.1694 7.11756 0 0 0.129366 0.0542594 73.9165 0 g 0 0 0 0 0 0 0 0 24.8643 10.4462 2.20936 0 0.517464 0 0.24077 100 t 0 0 0 0 0 0 0 0 22.6384 65.2266 96.8964 100 79.4308 0 25.8427 0

M03176_2.00_rc_shift8 (HOXB13_rc)
; oligos_7nt_mkv5_m3 versus M03176_2.00_rc (HOXB13_rc); m=185/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.434227; --------dtTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.8876 13.6517 0.786749 0.955546 15.2895 99.6656 0.299401 9.90532 c 0 0 0 0 0 0 0 0 7.63423 6.06742 0.0414079 0 0.211864 0 79.3081 0.400583 g 0 0 0 0 0 0 0 0 31.25 13.3146 0.455487 0 0.317797 0.250836 0.0332668 86.8172 t 0 0 0 0 0 0 0 0 34.2282 66.9663 98.7164 99.0445 84.1808 0.083612 20.3593 2.87691

M03142_2.00_rc_shift8 (HOXD13_rc)
; oligos_7nt_mkv5_m3 versus M03142_2.00_rc (HOXD13_rc); m=186/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.433632; --------dTTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.1457 9.0301 0 0.662983 8.92678 99.2274 0 10.6383 c 0 0 0 0 0 0 0 0 6.89655 3.76254 0.221976 0 0.802407 0 82.1005 0.0967118 g 0 0 0 0 0 0 0 0 32.4805 12.0401 0 0 0.100301 0.220751 0 86.9439 t 0 0 0 0 0 0 0 0 29.4772 75.1672 99.778 99.337 90.1705 0.551876 17.8995 2.32108

M05108_2.00_rc_shift8 (HOXC5,HOXC6,HOXD9_rc)
; oligos_7nt_mkv5_m3 versus M05108_2.00_rc (HOXC5,HOXC6,HOXD9_rc); m=187/241; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.433588; --------rtTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 30.5353 17.9134 0.604267 0.470064 16.5127 99.9938 0 0 c 0 0 0 0 0 0 0 0 14.1081 7.75978 0.0801578 0.0185552 0 0 76.5383 0 g 0 0 0 0 0 0 0 0 33.3396 12.7274 0.147984 0.0371103 0 0 0 99.0089 t 0 0 0 0 0 0 0 0 22.017 61.5994 99.1676 99.4743 83.4873 0.00621736 23.4617 0.991135

M05129_2.00_shift8 (CDX4)
; oligos_7nt_mkv5_m3 versus M05129_2.00 (CDX4); m=188/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.432902; --------gtTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 23.284 13.0973 0 0 0 100 0 0 c 0 0 0 0 0 0 0 0 16.0818 5.88251 0 0 0 0 0 0.10687 g 0 0 0 0 0 0 0 0 49.0157 17.6177 0.24334 0 0 0 0 46.92 t 0 0 0 0 0 0 0 0 11.6185 63.4025 99.7567 100 100 0 100 52.9731

M10527_2.00_rc_shift3 (FOXI2,FOXI3,FOXJ2_rc)
; oligos_7nt_mkv5_m3 versus M10527_2.00_rc (FOXI2,FOXI3,FOXJ2_rc); m=189/241; ncol2=18; w=-2; offset=-2; strand=R; shift=3; score=0.43251; ---wkdwwTrTTTrTt ; cor=; Ncor= a 0 0 0 29.2683 17.0732 26.8293 43.9024 34.1463 0 34.1463 0 0 0 63.4146 0 12.1951 c 0 0 0 14.6341 17.0732 17.0732 4.87805 14.6341 2.43902 0 0 0 0 0 21.9512 17.0732 g 0 0 0 12.1951 26.8293 29.2683 24.3902 21.9512 0 65.8537 0 0 0 36.5854 0 7.31707 t 0 0 0 43.9024 39.0244 26.8293 26.8293 29.2683 97.561 0 100 100 100 0 78.0488 63.4146

M03130_2.00_rc_shift8 (HOXC13_rc)
; oligos_7nt_mkv5_m3 versus M03130_2.00_rc (HOXC13_rc); m=190/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.432197; --------dTTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 28.8217 11.891 0.0794913 0.629426 11.5789 99.6038 0.263852 9.26316 c 0 0 0 0 0 0 0 0 11.7038 5.16241 0 0.157356 0.140351 0.396197 82.9156 0.701754 g 0 0 0 0 0 0 0 0 28.5032 10.0348 0 0.314713 0.0701754 0 0.263852 88.2105 t 0 0 0 0 0 0 0 0 30.9713 72.9118 99.9205 98.8985 88.2105 0 16.5567 1.82456

M04852_2.00_rc_shift7 (FOXD2,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M04852_2.00_rc (FOXD2,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXE3,FOXI3,FOXS1_rc); m=191/241; ncol2=13; w=0; offset=2; strand=R; shift=7; score=0.432159; -------wTRTTTAYw ; cor=; Ncor= a 0 0 0 0 0 0 0 34.6346 3.27484 27.7014 0.545184 0.176508 0.164794 83.8696 0.0688863 25.9049 c 0 0 0 0 0 0 0 8.59193 1.95863 0 0.413018 0.272786 0.164794 0 68.8289 12.5438 g 0 0 0 0 0 0 0 16.7334 0.830461 72.2986 0 3.35366 9.85768 14.0599 1.15959 20.1501 t 0 0 0 0 0 0 0 40.04 93.9361 0 99.0418 96.197 89.8127 2.07051 29.9426 41.4012

M00389_2.00_shift9 (M00389_2.00)
; oligos_7nt_mkv5_m3 versus M00389_2.00; m=192/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.431711; ---------tTTwAyd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 24.4352 11.2366 12.2987 27.1439 89.4248 6.768 25.2481 c 0 0 0 0 0 0 0 0 0 15.2721 4.21724 4.39072 6.627 0.0504586 35.595 5.41272 g 0 0 0 0 0 0 0 0 0 20.0059 8.66403 1.08274 3.97948 5.89084 2.36838 36.9199 t 0 0 0 0 0 0 0 0 0 40.2869 75.8821 82.2278 62.2496 4.6339 55.2686 32.4192

M01107_2.00_rc_shift4 (M01107_2.00_rc)
; oligos_7nt_mkv5_m3 versus M01107_2.00_rc; m=193/241; ncol2=8; w=-1; offset=-1; strand=R; shift=4; score=0.428691; ----wwTwwtTt---- ; cor=; Ncor= a 0 0 0 0 58.1615 31.742 14.6253 41.2998 41.256 24.0556 12.1077 18.0905 0 0 0 0 c 0 0 0 0 4.82217 4.21075 4.44932 3.03696 3.5247 6.89205 10.9555 17.9105 0 0 0 0 g 0 0 0 0 2.78215 5.04118 4.77193 3.1609 2.77263 3.00527 7.95531 1.48496 0 0 0 0 t 0 0 0 0 34.2342 59.0061 76.1535 52.5023 52.4467 66.0471 68.9816 62.5139 0 0 0 0

M06202_2.00_rc_shift7 (FOXP4_rc)
; oligos_7nt_mkv5_m3 versus M06202_2.00_rc (FOXP4_rc); m=194/241; ncol2=14; w=0; offset=2; strand=R; shift=7; score=0.428256; -------aTTTTTTTr ; cor=; Ncor= a 0 0 0 0 0 0 0 59.0909 0 0 0 0 0 0 0 36.3636 c 0 0 0 0 0 0 0 18.1818 0 0 0 0 0 0 9.09091 18.1818 g 0 0 0 0 0 0 0 4.54545 0 0 0 0 0 0 0 40.9091 t 0 0 0 0 0 0 0 18.1818 100 100 100 100 100 100 90.9091 4.54545

M05072_2.00_shift8 (HOXC13)
; oligos_7nt_mkv5_m3 versus M05072_2.00 (HOXC13); m=195/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.426428; --------gtTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 21.4685 9.14798 0 0 0 100 0 7.01262 c 0 0 0 0 0 0 0 0 13.6364 3.5426 0 0 0 0 0 0.233754 g 0 0 0 0 0 0 0 0 58.1119 23.1839 0 0 0.832178 0 0 25.9 t 0 0 0 0 0 0 0 0 6.78322 64.1256 100 100 99.1678 0 100 66.8537

M03099_2.00_rc_shift8 (HOXA13_rc)
; oligos_7nt_mkv5_m3 versus M03099_2.00_rc (HOXA13_rc); m=196/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.424282; --------ktTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 22.2096 17.1843 1.20087 3.51648 17.5162 99.5465 0 10.9912 c 0 0 0 0 0 0 0 0 13.2118 6.34921 1.63755 0 0.278035 0 78.9568 0.392542 g 0 0 0 0 0 0 0 0 32.6879 15.873 1.31004 0 0.834106 0.453515 0.989209 86.1629 t 0 0 0 0 0 0 0 0 31.8907 60.5935 95.8515 96.4835 81.3716 0 20.054 2.45339

M03131_2.00_shift8 (HOXC11)
; oligos_7nt_mkv5_m3 versus M03131_2.00 (HOXC11); m=197/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.424036; --------wtTTwAyG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 33.5285 20.3768 4.62469 5.18287 33.9965 99.5145 0.505968 9.0792 c 0 0 0 0 0 0 0 0 13.1538 8.46047 1.54749 0.496232 0.367008 0 66.4764 0.579524 g 0 0 0 0 0 0 0 0 20.9602 11.9394 2.68588 0.147032 0.656751 0.252476 0.40218 82.4855 t 0 0 0 0 0 0 0 0 32.3575 59.2233 91.1419 94.1739 64.9797 0.233055 32.6155 7.85576

M09112_2.00_rc_shift8 (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXS1_rc)
; oligos_7nt_mkv5_m3 versus M09112_2.00_rc (FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXS1_rc); m=198/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.423325; --------TGTTTAyw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2.2 7.6 0 0.2 0.4 77 0.6 54.4 c 0 0 0 0 0 0 0 0 0.2 0.4 0.2 0.4 0.6 7.6 55.8 11 g 0 0 0 0 0 0 0 0 0.4 91 0 2 10.8 1.4 5.8 8.2 t 0 0 0 0 0 0 0 0 97.2 1 99.8 97.4 88.2 14 37.8 26.4

M05116_2.00_rc_shift8 (HOXC6,HOXD10_rc)
; oligos_7nt_mkv5_m3 versus M05116_2.00_rc (HOXC6,HOXD10_rc); m=199/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.423103; --------dTTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 30.0538 11.9383 0.149317 0 7.35148 96.8515 0 0 c 0 0 0 0 0 0 0 0 10.3983 4.29649 0 0 0.35764 3.14846 78.4761 0 g 0 0 0 0 0 0 0 0 31.2164 7.59265 0.767918 0 0 0 0.0168947 99.3158 t 0 0 0 0 0 0 0 0 28.3315 76.1725 99.0828 100 92.2909 0 21.507 0.684199

M03136_2.00_rc_shift8 (HOXC12_rc)
; oligos_7nt_mkv5_m3 versus M03136_2.00_rc (HOXC12_rc); m=200/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.422908; --------dTTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.2776 9.00822 0.668357 0.578168 11.3576 99.9302 0 3.48962 c 0 0 0 0 0 0 0 0 8.6572 4.70526 0 0.0462535 0.10269 0.0232558 91.9144 0.256904 g 0 0 0 0 0 0 0 0 26.5069 11.1247 0.299608 0 0.287533 0.0465116 0.0427807 91.9931 t 0 0 0 0 0 0 0 0 33.5583 75.1618 99.032 99.3756 88.2522 0 8.04278 4.26033

M00505_2.00_shift9 (M00505_2.00)
; oligos_7nt_mkv5_m3 versus M00505_2.00; m=201/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.422571; ---------ttTwAyd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 24.2902 13.7233 14.5926 28.3836 84.3774 7.49952 26.3896 c 0 0 0 0 0 0 0 0 0 17.4628 7.83888 5.58739 9.35407 0.0370792 37.1454 7.79099 g 0 0 0 0 0 0 0 0 0 20.9068 11.8118 1.52274 5.67353 10.0272 3.6871 34.2254 t 0 0 0 0 0 0 0 0 0 37.3403 66.6261 78.2973 56.5888 5.55834 51.668 31.594

M02945_2.00_shift0 (ONECUT3)
; oligos_7nt_mkv5_m3 versus M02945_2.00 (ONECUT3); m=202/241; ncol2=14; w=-5; offset=-5; strand=D; shift=0; score=0.422258; wtTATyGATTTTtt-- ; cor=; Ncor= a 38.0694 19.4408 5.13622 99.0874 0.359653 0.180003 0.0818197 97.608 0.179241 0.862069 16.0954 11.3583 11.6612 13.6678 0 0 c 10.4095 6.85855 2.78398 0.114081 0.147131 34.8552 0.0490918 0.224755 0.668079 1.62835 1.4764 6.44243 18.7664 22.8289 0 0 g 20.9012 14.1612 1.5632 0.0977836 0.0980873 0.327279 99.4927 1.65356 0.081473 0.446999 2.28052 3.54463 6.23355 16.8092 0 0 t 30.62 59.5395 90.5166 0.700782 99.3951 64.6375 0.37637 0.513726 99.0712 97.0626 80.1476 78.6546 63.3388 46.6941 0 0

M03780_2.00_shift8 (M03780_2.00)
; oligos_7nt_mkv5_m3 versus M03780_2.00; m=203/241; ncol2=12; w=0; offset=3; strand=D; shift=8; score=0.421857; --------gtTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 23.9344 13.6467 0.507361 0.687736 0.29192 100 0 1.17695 c 0 0 0 0 0 0 0 0 19.524 6.4377 0.143182 0 0 0 0.250854 0.120834 g 0 0 0 0 0 0 0 0 33.6429 16.1242 0.476235 0.0125043 0 0 0.144241 48.8544 t 0 0 0 0 0 0 0 0 22.8987 63.7915 98.8732 99.2998 99.7081 0 99.6049 49.8478

M03207_2.00_rc_shift8 (HOXD12_rc)
; oligos_7nt_mkv5_m3 versus M03207_2.00_rc (HOXD12_rc); m=204/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.420541; --------kTTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 19.8099 16.5363 3.10515 0 13.9535 99.2017 0 0 c 0 0 0 0 0 0 0 0 5.62865 2.50391 0.42343 0.218978 0.125707 0 86.7386 0.363636 g 0 0 0 0 0 0 0 0 35.2339 9.6505 0 0 0 0.725689 0.126904 99.4182 t 0 0 0 0 0 0 0 0 39.3275 71.3093 96.4714 99.781 85.9208 0.0725689 13.1345 0.218182

M05399_2.00_shift8 (HOXA10,HOXC6)
; oligos_7nt_mkv5_m3 versus M05399_2.00 (HOXA10,HOXC6); m=205/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.420227; --------gtTTWATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.3421 16.918 5.76692 4.71366 26.8568 100 0.0395257 1.35268 c 0 0 0 0 0 0 0 0 18.4004 19.9149 0 0 0.132626 0 13.083 6.02558 g 0 0 0 0 0 0 0 0 41.1003 21.3457 7.60913 0 1.2931 0 1.3834 39.4245 t 0 0 0 0 0 0 0 0 20.1572 41.8213 86.6239 95.2863 71.7175 0 85.4941 53.1972

M05018_2.00_shift8 (CDX1)
; oligos_7nt_mkv5_m3 versus M05018_2.00 (CDX1); m=206/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.419981; --------gtTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.1558 10.7769 0 0 0 100 0 0 c 0 0 0 0 0 0 0 0 14.1759 5.39322 0.0999106 0 0.0526094 0 0 0.147167 g 0 0 0 0 0 0 0 0 56.2878 23.0946 0 0 0 0 0 61.9416 t 0 0 0 0 0 0 0 0 9.38043 60.7353 99.9001 100 99.9474 0 100 37.9113

M05131_2.00_shift8 (CDX4)
; oligos_7nt_mkv5_m3 versus M05131_2.00 (CDX4); m=207/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.419974; --------gtTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 17.1171 12.117 0.875 3.71747 0 100 0 4.24403 c 0 0 0 0 0 0 0 0 17.6319 10.585 0 0 0 0 0 0.132626 g 0 0 0 0 0 0 0 0 55.3411 23.1894 2 0 1.52091 0 0 44.0981 t 0 0 0 0 0 0 0 0 9.90991 54.1086 97.125 96.2825 98.4791 0 100 51.5252

M05394_2.00_rc_shift8 (HOXA10,HOXC6_rc)
; oligos_7nt_mkv5_m3 versus M05394_2.00_rc (HOXA10,HOXC6_rc); m=208/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.419511; --------dTTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 29.0947 13.8229 0.503914 0 9.7756 99.991 0 0 c 0 0 0 0 0 0 0 0 11.4226 4.86577 0 0.0180848 0 0 76.9397 0 g 0 0 0 0 0 0 0 0 31.9436 9.95741 0 0 0 0.00904323 0 100 t 0 0 0 0 0 0 0 0 27.5391 71.3539 99.4961 99.9819 90.2244 0 23.0603 0

M02092_2.00_shift9 (HOXB13)
; oligos_7nt_mkv5_m3 versus M02092_2.00 (HOXB13); m=209/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.41949; ---------tTTwAyd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 24.4335 11.9073 12.6395 28.824 84.122 6.1093 27.3557 c 0 0 0 0 0 0 0 0 0 16.7091 7.66871 8.47254 8.50971 0.0408548 34.1176 6.48132 g 0 0 0 0 0 0 0 0 0 21.6706 11.2138 6.15233 6.89784 10.7217 2.38646 33.4123 t 0 0 0 0 0 0 0 0 0 37.1868 69.2102 72.7356 55.7684 5.11546 57.3867 32.7507

M00410_2.00_shift9 (HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M00410_2.00 (HOXC5,HOXC6); m=210/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.418284; ---------ttTwAyk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 23.4744 14.2094 10.5763 35.4051 74.0176 4.56811 13.6557 c 0 0 0 0 0 0 0 0 0 16.8763 9.43005 8.92285 7.00663 7.8798 26.8187 10.9589 g 0 0 0 0 0 0 0 0 0 16.8763 10.7392 6.16332 5.2955 8.2838 8.92716 38.6348 t 0 0 0 0 0 0 0 0 0 42.7731 65.6214 74.3375 52.2927 9.81883 59.6861 36.7506

M00293_2.00_shift9 (HOXD13)
; oligos_7nt_mkv5_m3 versus M00293_2.00 (HOXD13); m=211/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.418245; ---------wtTwAyd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 25.0172 15.0367 16.1218 27.456 85.6643 6.94433 26.9658 c 0 0 0 0 0 0 0 0 0 17.8065 7.61786 6.29762 10.9417 1.09465 34.0533 8.45341 g 0 0 0 0 0 0 0 0 0 21.3183 11.9472 3.12731 6.31282 9.30393 4.51735 32.9361 t 0 0 0 0 0 0 0 0 0 35.8579 65.3982 74.4533 55.2895 3.93707 54.485 31.6447

M02520_2.00_shift9 (LIN54)
; oligos_7nt_mkv5_m3 versus M02520_2.00 (LIN54); m=212/241; ncol2=8; w=0; offset=4; strand=D; shift=9; score=0.417995; ---------aTTTAAA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 49.7525 0.198413 0.198413 0.198413 79.5635 99.4048 99.4048 c 0 0 0 0 0 0 0 0 0 0.247525 0.198413 0.198413 20.0397 0.198413 0.198413 0.198413 g 0 0 0 0 0 0 0 0 0 25 0.198413 0.198413 0.198413 20.0397 0.198413 0.198413 t 0 0 0 0 0 0 0 0 0 25 99.4048 99.4048 79.5635 0.198413 0.198413 0.198413

M09580_2.00_shift9 (M09580_2.00)
; oligos_7nt_mkv5_m3 versus M09580_2.00; m=213/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.417757; ---------wTTTATG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 30.4 0.1 4.8 0.7 99.6 0.9 0.7 c 0 0 0 0 0 0 0 0 0 12.1 0.3 0.4 1.2 0.2 24.5 2.8 g 0 0 0 0 0 0 0 0 0 12.9 4.2 0.1 0.1 0.1 2.1 75.6 t 0 0 0 0 0 0 0 0 0 44.6 95.4 94.7 98 0.1 72.5 20.9

M02651_2.00_rc_shift10 (ARID3B,ARID3C_rc)
; oligos_7nt_mkv5_m3 versus M02651_2.00_rc (ARID3B,ARID3C_rc); m=214/241; ncol2=6; w=0; offset=5; strand=R; shift=10; score=0.415891; ----------TTTrAT ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 22.2222 0 0 62.963 100 0 c 0 0 0 0 0 0 0 0 0 0 3.7037 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 33.3333 0 0 t 0 0 0 0 0 0 0 0 0 0 74.0741 100 100 3.7037 0 100

M00508_2.00_shift9 (M00508_2.00)
; oligos_7nt_mkv5_m3 versus M00508_2.00; m=215/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.413283; ---------wtTwAyk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 25.448 17.4738 16.2033 29.035 73.5952 7.07332 15.3114 c 0 0 0 0 0 0 0 0 0 17.7545 10.1828 6.99515 7.0887 3.59154 38.719 15.3114 g 0 0 0 0 0 0 0 0 0 21.0444 13.7454 6.32947 12.5347 11.0075 10.5522 37.2853 t 0 0 0 0 0 0 0 0 0 35.7531 58.598 70.4721 51.3416 11.8057 43.6555 32.0918

M05401_2.00_shift8 (HOXA10,HOXC6)
; oligos_7nt_mkv5_m3 versus M05401_2.00 (HOXA10,HOXC6); m=216/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.413139; --------rtTTWATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 25.3114 17.0041 3.73906 4.20025 30.0304 98.9868 0 4.82315 c 0 0 0 0 0 0 0 0 20.0623 16.5917 0 0 1.00304 0 8.76777 3.55994 g 0 0 0 0 0 0 0 0 38.2117 24.2782 6.88146 0.466695 0.668693 0 2.48815 40.0092 t 0 0 0 0 0 0 0 0 16.4146 42.126 89.3795 95.3331 68.2979 1.01322 88.7441 51.6077

M02526_2.00_rc_shift9 (LIN54_rc)
; oligos_7nt_mkv5_m3 versus M02526_2.00_rc (LIN54_rc); m=217/241; ncol2=8; w=0; offset=4; strand=R; shift=9; score=0.412858; ---------wTTTraa ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 35.529 11.4105 12.6833 4.288 32.0018 65.0057 59.4649 c 0 0 0 0 0 0 0 0 0 10.5946 8.53807 3.59766 23.0075 8.54881 8.97528 11.1941 g 0 0 0 0 0 0 0 0 0 24.7877 6.01667 3.85851 0.0422488 52.2371 11.0726 15.1105 t 0 0 0 0 0 0 0 0 0 29.0887 74.0348 79.8606 72.6622 7.21233 14.9465 14.2305

M00297_2.00_shift9 (HOXD13)
; oligos_7nt_mkv5_m3 versus M00297_2.00 (HOXD13); m=218/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.411448; ---------ttTwrta ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 24.7742 15.9546 10.9389 29.07 63.9446 6.16869 46.006 c 0 0 0 0 0 0 0 0 0 16.4414 7.31368 3.39506 7.76562 2.99821 13.3229 15.9391 g 0 0 0 0 0 0 0 0 0 22.1935 12.6765 6.43867 8.58233 28.1632 17.107 17.7924 t 0 0 0 0 0 0 0 0 0 36.5909 64.0553 79.2274 54.5821 4.89403 63.4014 20.2625

M09161_2.00_shift9 (HOXC5,HOXC6,HOXC9)
; oligos_7nt_mkv5_m3 versus M09161_2.00 (HOXC5,HOXC6,HOXC9); m=219/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.410833; ---------wTTtATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 26 4 0.8 22.4 96 1.2 5.2 c 0 0 0 0 0 0 0 0 0 15.6 2.8 1.2 12.6 2.4 2.4 0.4 g 0 0 0 0 0 0 0 0 0 7.4 4.6 1.6 3.2 1.2 1.8 45.4 t 0 0 0 0 0 0 0 0 0 51 88.6 96.4 61.8 0.4 94.6 49

M09674_2.00_shift9 (M09674_2.00)
; oligos_7nt_mkv5_m3 versus M09674_2.00; m=220/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.410791; ---------tTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 22.328 8.22898 9.08945 14.9577 80.5999 0.968992 13.0954 c 0 0 0 0 0 0 0 0 0 20.6828 2.32558 0.968992 6.0972 0.968992 0.968992 0.968992 g 0 0 0 0 0 0 0 0 0 8.5486 2.32558 3.53309 1.74419 6.87239 0.968992 52.4448 t 0 0 0 0 0 0 0 0 0 48.4407 87.1199 86.4085 77.201 11.5587 97.093 33.4908

M03208_2.00_rc_shift8 (HOXD12_rc)
; oligos_7nt_mkv5_m3 versus M03208_2.00_rc (HOXD12_rc); m=221/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.410383; --------wtTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.2139 19.0248 5.44508 1.29668 19.9091 99.7379 0.173085 5.73192 c 0 0 0 0 0 0 0 0 15.2916 10.2311 0 0 0.0826105 0.262055 82.3453 3.57143 g 0 0 0 0 0 0 0 0 23.9096 17.1082 4.45076 0 1.40438 0 0 83.9065 t 0 0 0 0 0 0 0 0 29.5849 53.6359 90.1042 98.7033 78.6039 0 17.4816 6.79012

M01245_2.00_shift9 (HOXC6)
; oligos_7nt_mkv5_m3 versus M01245_2.00 (HOXC6); m=222/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.410202; ---------ttTwATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 20.4823 15.1097 14.2891 34.1776 85.2398 2.89001 11.4242 c 0 0 0 0 0 0 0 0 0 15.6358 5.96158 5.00031 4.76629 2.81642 14.1719 8.80862 g 0 0 0 0 0 0 0 0 0 16.4374 11.8857 4.80424 5.26757 6.65566 6.89819 32.9744 t 0 0 0 0 0 0 0 0 0 47.4445 67.0431 75.9063 55.7886 5.28815 76.0399 46.7929

M00538_2.00_shift9 (M00538_2.00)
; oligos_7nt_mkv5_m3 versus M00538_2.00; m=223/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.409251; ---------wttwayk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 26.5831 19.3737 16.2686 29.7385 67.7597 7.64973 13.9819 c 0 0 0 0 0 0 0 0 0 17.8192 10.8473 7.76196 8.52023 7.35932 37.5124 15.2986 g 0 0 0 0 0 0 0 0 0 21.1212 12.7295 8.6645 12.7107 11.2006 12.1177 38.0067 t 0 0 0 0 0 0 0 0 0 34.4765 57.0495 67.305 49.0305 13.6804 42.7202 32.7127

M05118_2.00_rc_shift8 (HOXC6,HOXD10_rc)
; oligos_7nt_mkv5_m3 versus M05118_2.00_rc (HOXC6,HOXD10_rc); m=224/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.409162; --------dTTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.105 12.2901 0.187617 0 4.51067 99.6009 0 0 c 0 0 0 0 0 0 0 0 9.57402 3.43928 0.291849 0 0 0 95.0491 0 g 0 0 0 0 0 0 0 0 30.8098 6.97637 0.667084 0.210438 0 0.399076 0 100 t 0 0 0 0 0 0 0 0 28.5112 77.2942 98.8535 99.7896 95.4893 0 4.95089 0

M03781_2.00_shift8 (M03781_2.00)
; oligos_7nt_mkv5_m3 versus M03781_2.00; m=225/241; ncol2=12; w=0; offset=3; strand=D; shift=8; score=0.408689; --------rtTTTATK ; cor=; Ncor= a 0 0 0 0 0 0 0 0 26.9348 19.5558 0.311947 0.595017 0.335445 99.9719 0 1.32636 c 0 0 0 0 0 0 0 0 19.6119 6.85995 0.0372474 0 0.0372717 0 7.67238 0.590618 g 0 0 0 0 0 0 0 0 30.3858 20.5144 0.0884626 0 0 0.0280505 0 72.1701 t 0 0 0 0 0 0 0 0 23.0676 53.0699 99.5623 99.405 99.6273 0 92.3276 25.9129

M03772_2.00_rc_shift8 (HOXC5,HOXC6_rc)
; oligos_7nt_mkv5_m3 versus M03772_2.00_rc (HOXC5,HOXC6_rc); m=226/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.407824; --------dtTTTAyG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 34.053 22.0741 1.69682 0.650142 20.5006 99.741 0 0 c 0 0 0 0 0 0 0 0 10.5083 7.1787 0.323518 0.0744955 0 0 67.3539 0.0672359 g 0 0 0 0 0 0 0 0 30.0355 11.9846 1.34689 0.155763 0.184137 0.14311 0 98.4065 t 0 0 0 0 0 0 0 0 25.4031 58.7626 96.6328 99.1196 79.3153 0.115851 32.6461 1.52626

M04982_2.00_rc_shift8 (HOXA13_rc)
; oligos_7nt_mkv5_m3 versus M04982_2.00_rc (HOXA13_rc); m=227/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.407727; --------dtTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 29.4964 20.1018 0.477646 0.771754 11.0613 99.7285 0.0342877 6.17573 c 0 0 0 0 0 0 0 0 10.8886 4.89816 0.248376 0.0192938 0.34459 0 88.1536 0 g 0 0 0 0 0 0 0 0 33.0935 12.6576 1.03172 0 0 0.271528 0 92.5819 t 0 0 0 0 0 0 0 0 26.5215 62.3424 98.2423 99.209 88.5941 0 11.8121 1.24235

M08131_2.00_shift9 (CDX2)
; oligos_7nt_mkv5_m3 versus M08131_2.00 (CDX2); m=228/241; ncol2=11; w=0; offset=4; strand=D; shift=9; score=0.407156; ---------tTTTATk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 7.57671 0 0 0 100 0 4.25798 c 0 0 0 0 0 0 0 0 0 19.5992 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 9.39261 0 0 0 0 0 52.0977 t 0 0 0 0 0 0 0 0 0 63.4314 100 100 100 0 100 43.6443

M08200_2.00_rc_shift8 (FOXB2_rc)
; oligos_7nt_mkv5_m3 versus M08200_2.00_rc (FOXB2_rc); m=229/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.406723; --------TGTTTryy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11.1111 18.5185 0 0 0 48.1481 14.8148 22.2222 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48.1481 25.9259 g 0 0 0 0 0 0 0 0 0 81.4815 0 0 3.7037 51.8519 7.40741 11.1111 t 0 0 0 0 0 0 0 0 88.8889 0 100 100 96.2963 0 29.6296 40.7407

M06473_2.00_rc_shift8 (FOXB2_rc)
; oligos_7nt_mkv5_m3 versus M06473_2.00_rc (FOXB2_rc); m=230/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.406723; --------TGTTTryy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11.1111 18.5185 0 0 0 48.1481 14.8148 22.2222 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48.1481 25.9259 g 0 0 0 0 0 0 0 0 0 81.4815 0 0 3.7037 51.8519 7.40741 11.1111 t 0 0 0 0 0 0 0 0 88.8889 0 100 100 96.2963 0 29.6296 40.7407

M06194_2.00_rc_shift8 (FOXB2_rc)
; oligos_7nt_mkv5_m3 versus M06194_2.00_rc (FOXB2_rc); m=231/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.406723; --------TGTTTryy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11.1111 18.5185 0 0 0 48.1481 14.8148 22.2222 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48.1481 25.9259 g 0 0 0 0 0 0 0 0 0 81.4815 0 0 3.7037 51.8519 7.40741 11.1111 t 0 0 0 0 0 0 0 0 88.8889 0 100 100 96.2963 0 29.6296 40.7407

M03133_2.00_rc_shift8 (HOXC11_rc)
; oligos_7nt_mkv5_m3 versus M03133_2.00_rc (HOXC11_rc); m=232/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.405515; --------dtTTWACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 30.122 19.6655 0.86546 1.67866 27.1377 99.5146 0 3.73049 c 0 0 0 0 0 0 0 0 15.6098 7.07045 0.668765 0 1.00361 0 81.2149 0.456795 g 0 0 0 0 0 0 0 0 25.5285 10.9225 1.69158 0 0.240867 0 0 93.6429 t 0 0 0 0 0 0 0 0 28.7398 62.3416 96.7742 98.3213 71.6178 0.485437 18.7851 2.16978

M00390_2.00_shift9 (M00390_2.00)
; oligos_7nt_mkv5_m3 versus M00390_2.00; m=233/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.405365; ---------ttTwAyk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 24.3261 15.0809 13.2509 37.5039 78.6702 4.99344 14.4111 c 0 0 0 0 0 0 0 0 0 16.6357 9.61601 7.12825 4.78002 2.25977 38.0205 8.31446 g 0 0 0 0 0 0 0 0 0 20.1167 9.71266 3.36715 5.0251 7.06578 7.6762 47.3703 t 0 0 0 0 0 0 0 0 0 38.9216 65.5904 76.2537 52.691 12.0043 49.3099 29.9041

M07961_2.00_rc_shift8 (FOXA1_rc)
; oligos_7nt_mkv5_m3 versus M07961_2.00_rc (FOXA1_rc); m=234/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.404247; --------TRTTTACw ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2.449 27.3469 0 0.2041 0 76.1224 1.0204 41.0204 c 0 0 0 0 0 0 0 0 0.4082 0.816301 0 0 0.2041 0 86.9388 10.6122 g 0 0 0 0 0 0 0 0 0 71.8368 0 3.0612 20.6122 21.6327 0 0 t 0 0 0 0 0 0 0 0 97.1428 0 100 96.7347 79.1837 2.2449 12.0408 48.3673

M00554_2.00_shift9 (HOXC5,HOXC6)
; oligos_7nt_mkv5_m3 versus M00554_2.00 (HOXC5,HOXC6); m=235/241; ncol2=10; w=0; offset=4; strand=D; shift=9; score=0.40275; ---------wtTwAyk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 25.1496 14.8997 12.2081 38.1649 88.2245 4.81214 16.5526 c 0 0 0 0 0 0 0 0 0 17.7226 7.32536 5.27038 3.7883 0.0298935 26.8735 8.72809 g 0 0 0 0 0 0 0 0 0 19.9822 13.6173 5.65252 7.04217 6.04895 9.69046 40.7129 t 0 0 0 0 0 0 0 0 0 37.1455 64.1576 76.869 51.0046 5.69668 58.6239 34.0063

M02942_2.00_shift0 (ONECUT2)
; oligos_7nt_mkv5_m3 versus M02942_2.00 (ONECUT2); m=236/241; ncol2=14; w=-5; offset=-5; strand=D; shift=0; score=0.402699; wwTATyGATTTttt-- ; cor=; Ncor= a 40.5383 26.057 7.39538 98.5904 0.915522 0 0.209293 98.9596 0.249688 0.792393 18.5185 14.428 12.9154 15.3911 0 0 c 9.96636 7.45381 3.78788 0 0.0416146 62.0301 0 0.374532 0.749064 4.51664 2.58326 10.6716 21.666 22.6661 0 0 g 22.1194 18.0395 3.0303 0.580431 0.0832293 0.668338 99.5396 0.332917 0.0416146 0.475436 4.8864 7.22823 8.07741 18.7132 0 0 t 27.3759 48.4497 85.7864 0.829187 98.9596 37.3016 0.251151 0.332917 98.9596 94.2155 74.0118 67.6722 57.3412 43.2296 0 0

M00750_2.00_rc_shift3 (M00750_2.00_rc)
; oligos_7nt_mkv5_m3 versus M00750_2.00_rc; m=237/241; ncol2=8; w=-2; offset=-2; strand=R; shift=3; score=0.401987; ---aTtTwTTT----- ; cor=; Ncor= a 0 0 0 66.6667 15.3846 20 13.3333 60 13.3333 6.66667 8.33333 0 0 0 0 0 c 0 0 0 8.33333 7.69231 6.66667 6.66667 6.66667 6.66667 6.66667 8.33333 0 0 0 0 0 g 0 0 0 8.33333 7.69231 6.66667 6.66667 6.66667 6.66667 6.66667 8.33333 0 0 0 0 0 t 0 0 0 16.6667 69.2308 66.6667 73.3333 26.6667 73.3333 80 75 0 0 0 0 0

M05203_2.00_rc_shift8 (HOXB13_rc)
; oligos_7nt_mkv5_m3 versus M05203_2.00_rc (HOXB13_rc); m=238/241; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.400924; --------dTTTTACG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 30.929 14.7394 0 0 2.31467 99.7813 0 0 c 0 0 0 0 0 0 0 0 11.8215 3.22992 0 0 0 0.177065 99.9009 0.0365211 g 0 0 0 0 0 0 0 0 30.9238 8.00525 0 0 0 0 0.0990667 99.9635 t 0 0 0 0 0 0 0 0 26.3257 74.0254 100 100 97.6853 0.0416623 0 0

M05122_2.00_shift8 (HOXD13)
; oligos_7nt_mkv5_m3 versus M05122_2.00 (HOXD13); m=239/241; ncol2=11; w=0; offset=3; strand=D; shift=8; score=0.400776; --------GkTTTATK ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.543478 0 0 0 0 98.3957 0 0 c 0 0 0 0 0 0 0 0 0.815217 2.06349 0 3.15789 0 0 1.34048 0 g 0 0 0 0 0 0 0 0 82.337 39.5238 16.5533 0 0 0 0 27.5591 t 0 0 0 0 0 0 0 0 16.3043 58.4127 83.4467 96.8421 100 1.60428 98.6595 72.4409

M00239_2.00_rc_shift2 (GFI1B_rc)
; oligos_7nt_mkv5_m3 versus M00239_2.00_rc (GFI1B_rc); m=240/241; ncol2=11; w=-3; offset=-3; strand=R; shift=2; score=0.400519; --cyCWGATTTmt--- ; cor=; Ncor= a 0 0 22.4599 19.8505 2.43281 69.9754 0.0187568 99.9437 0.0187568 0.0187568 2.5589 34.8939 22.5859 0 0 0 c 0 0 32.6204 40.8074 72.5158 0.0187568 0.0187568 0.0187568 0.0187568 0.0187568 2.5589 25.0171 22.5859 0 0 0 g 0 0 22.4599 9.81583 22.6185 0.0187568 99.9437 0.0187568 0.0187568 0.0187568 2.5589 15.2029 22.5859 0 0 0 t 0 0 22.4599 29.5263 2.43281 29.9871 0.0187568 0.0187568 99.9437 99.9437 92.3233 24.8861 32.2422 0 0 0

M02943_2.00_shift0 (ONECUT1)
; oligos_7nt_mkv5_m3 versus M02943_2.00 (ONECUT1); m=241/241; ncol2=14; w=-5; offset=-5; strand=D; shift=0; score=0.40005; wwTATyGATTTttt-- ; cor=; Ncor= a 35.5083 25.4795 8.75432 99.8611 0.327332 0.025243 0.0377929 99.6346 0.188513 0.323315 20.7494 15.7417 15.0607 15.0986 0 0 c 11.3935 7.73736 3.86442 0 0.0251794 52.884 0.113379 0.0881945 0.301621 4.69405 2.51924 10.8308 23.6975 24.4815 0 0 g 19.3728 17.5531 2.01857 0.0505114 0.0881279 0.164079 99.6221 0.125992 0.125676 0.287391 4.28728 6.92903 9.01619 17.3875 0 0 t 33.7253 49.23 85.3627 0.088395 99.5594 46.9267 0.226757 0.151191 99.3842 94.6952 72.4441 66.4985 52.2256 43.0324 0 0

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv4_m2_shift2 ; 31 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv4_m2_shift2 (oligos_6nt_mkv4_m2)
; oligos_6nt_mkv4_m2; m=0 (reference); ncol1=17; shift=2; ncol=19; --ssgCtGGGCAGGGCass ; Alignment reference a 0 0 728 729 327 165 327 138 224 197 194 3071 106 207 178 223 2189 583 703 c 0 0 1243 1291 675 3547 452 237 351 272 3556 399 206 241 175 3523 786 1121 1180 g 0 0 1709 1600 2827 403 705 3757 3443 3644 388 561 3827 3677 3757 339 808 1936 1697 t 0 0 570 630 421 135 2766 118 232 137 112 219 111 125 140 165 467 610 670

M08876_2.00_rc_shift1 (KLF3_rc)
; oligos_6nt_mkv4_m2 versus M08876_2.00_rc (KLF3_rc); m=1/30; ncol2=19; w=-1; offset=-1; strand=R; shift=1; score=0.667258; -ggrgrdGGGyGGGGcygg ; cor=; Ncor= a 0 21.2851 22.6908 25.9036 24.498 32.7309 34.5382 3.41365 0.60241 0.401606 8.63454 0.803213 0.401606 18.4739 7.63052 8.43373 18.2731 13.0522 9.23695 c 0 18.8755 22.2892 20.4819 18.6747 24.6988 4.41767 0 0 0.803213 64.257 0.60241 2.61044 1.80723 1.00402 61.8474 38.1526 20.4819 24.2972 g 0 47.1888 46.1847 42.3695 49.5984 31.5261 35.9438 96.5863 99.1968 98.5944 0 98.1928 72.49 75.502 84.3373 14.8594 16.2651 49.5984 53.012 t 0 12.6506 8.83534 11.245 7.22892 11.0442 25.1004 0 0.200803 0.200803 27.1084 0.401606 24.498 4.21687 7.02811 14.8594 27.3092 16.8675 13.4538

M08982_2.00_rc_shift1 (M08982_2.00_rc)
; oligos_6nt_mkv4_m2 versus M08982_2.00_rc; m=2/30; ncol2=19; w=-1; offset=-1; strand=R; shift=1; score=0.667258; -ggrgrdGGGyGGGGcygg ; cor=; Ncor= a 0 21.2851 22.6908 25.9036 24.498 32.7309 34.5382 3.41365 0.60241 0.401606 8.63454 0.803213 0.401606 18.4739 7.63052 8.43373 18.2731 13.0522 9.23695 c 0 18.8755 22.2892 20.4819 18.6747 24.6988 4.41767 0 0 0.803213 64.257 0.60241 2.61044 1.80723 1.00402 61.8474 38.1526 20.4819 24.2972 g 0 47.1888 46.1847 42.3695 49.5984 31.5261 35.9438 96.5863 99.1968 98.5944 0 98.1928 72.49 75.502 84.3373 14.8594 16.2651 49.5984 53.012 t 0 12.6506 8.83534 11.245 7.22892 11.0442 25.1004 0 0.200803 0.200803 27.1084 0.401606 24.498 4.21687 7.02811 14.8594 27.3092 16.8675 13.4538

M08347_2.00_shift2 (ZNF543)
; oligos_6nt_mkv4_m2 versus M08347_2.00 (ZNF543); m=3/30; ncol2=12; w=0; offset=0; strand=D; shift=2; score=0.609222; --sssCWGGsCaGs----- ; cor=; Ncor= a 0 0 0.15625 8.28125 18.2812 0.15625 25.7812 0.15625 0.15625 20.1562 0.15625 62.0313 0.15625 0.15625 0 0 0 0 0 c 0 0 31.4063 48.9063 38.9063 76.4063 0.15625 0.15625 0.15625 28.2813 99.5313 17.0313 20.7812 43.2813 0 0 0 0 0 g 0 0 58.9063 42.6563 37.0313 23.2812 0.15625 99.5313 99.5313 44.5312 0.15625 8.28125 77.0312 41.4062 0 0 0 0 0 t 0 0 9.53125 0.15625 5.78125 0.15625 73.9062 0.15625 0.15625 7.03125 0.15625 12.6563 2.03125 15.1562 0 0 0 0 0

M08920_2.00_rc_shift1 (SP3,SP6_rc)
; oligos_6nt_mkv4_m2 versus M08920_2.00_rc (SP3,SP6_rc); m=4/30; ncol2=20; w=-1; offset=-1; strand=R; shift=1; score=0.607044; -gggrggGGGcGGGGcsrg ; cor=; Ncor= a 0 20.7605 17.5602 22.8012 27.6205 17.1837 12.0783 13.8554 0.240964 0.963855 23.4488 4.44277 0.722892 18.9458 9.51807 11.4157 11.2048 25.753 20.0602 c 0 22.6431 21.8373 22.003 21.9277 19.9699 7.5 0.240964 1.0241 1.95783 62.756 3.43373 1.4759 3.49398 13.3133 55.3916 36.7169 13.2982 16.747 g 0 41.8599 47.4849 43.9006 38.9307 55.4669 63.8253 85.4819 97.741 96.6265 5.06024 89.0211 87.1687 71.9277 73.4639 23.9157 31.5512 44.9849 51.5813 t 0 14.7364 13.1175 11.2952 11.5211 7.37952 16.5964 0.421687 0.993976 0.451807 8.73494 3.10241 10.6325 5.63253 3.70482 9.27711 20.5271 15.9639 11.6114

M08978_2.00_rc_shift1 (M08978_2.00_rc)
; oligos_6nt_mkv4_m2 versus M08978_2.00_rc; m=5/30; ncol2=20; w=-1; offset=-1; strand=R; shift=1; score=0.607044; -gggrggGGGcGGGGcsrg ; cor=; Ncor= a 0 20.7605 17.5602 22.8012 27.6205 17.1837 12.0783 13.8554 0.240964 0.963855 23.4488 4.44277 0.722892 18.9458 9.51807 11.4157 11.2048 25.753 20.0602 c 0 22.6431 21.8373 22.003 21.9277 19.9699 7.5 0.240964 1.0241 1.95783 62.756 3.43373 1.4759 3.49398 13.3133 55.3916 36.7169 13.2982 16.747 g 0 41.8599 47.4849 43.9006 38.9307 55.4669 63.8253 85.4819 97.741 96.6265 5.06024 89.0211 87.1687 71.9277 73.4639 23.9157 31.5512 44.9849 51.5813 t 0 14.7364 13.1175 11.2952 11.5211 7.37952 16.5964 0.421687 0.993976 0.451807 8.73494 3.10241 10.6325 5.63253 3.70482 9.27711 20.5271 15.9639 11.6114

M08965_2.00_rc_shift1 (M08965_2.00_rc)
; oligos_6nt_mkv4_m2 versus M08965_2.00_rc; m=6/30; ncol2=15; w=-1; offset=-1; strand=R; shift=1; score=0.581469; -ggggswGGGhGkGGc--- ; cor=; Ncor= a 0 24.2485 12.6253 19.8397 16.2325 15.8317 46.2926 4.40882 0.400802 1.002 26.2525 3.40681 8.61723 4.20842 5.81162 20.2405 0 0 0 c 0 11.022 9.01804 14.8297 17.8357 46.2926 2.20441 0 0.200401 0.801603 30.8617 1.002 3.00601 0.601202 3.80762 59.519 0 0 0 g 0 47.6954 66.1323 55.1102 54.3086 29.0581 17.0341 94.7896 99.1984 97.7956 0.200401 94.3888 60.9218 94.3888 85.3707 7.81563 0 0 0 t 0 17.0341 12.2244 10.2204 11.6232 8.81764 34.4689 0.801603 0.200401 0.400802 42.6854 1.2024 27.4549 0.801603 5.01002 12.4248 0 0 0

M08299_2.00_rc_shift5 (KLF12_rc)
; oligos_6nt_mkv4_m2 versus M08299_2.00_rc (KLF12_rc); m=7/30; ncol2=15; w=0; offset=3; strand=R; shift=5; score=0.579487; -----vgGGGCGkGGCcgg ; cor=; Ncor= a 0 0 0 0 0 25.6513 15.0301 13.2265 0 0 7.014 0 0.4008 8.016 2.6052 5.01 9.6192 20.2405 18.2365 c 0 0 0 0 0 31.4629 10.8216 0 0 0 78.5571 0 5.6112 0.4008 3.8076 77.7555 49.8998 20.4409 17.2345 g 0 0 0 0 0 32.6653 55.1102 86.7735 100 100 0.2004 100 63.3267 87.1743 87.3747 5.01 23.6473 39.479 55.3106 t 0 0 0 0 0 10.2204 19.0381 0 0 0 14.2285 0 30.6613 4.4088 6.2124 12.2244 16.8337 19.8397 9.2184

M08871_2.00_rc_shift6 (KLF1_rc)
; oligos_6nt_mkv4_m2 versus M08871_2.00_rc (KLF1_rc); m=8/30; ncol2=14; w=0; offset=4; strand=R; shift=6; score=0.540114; ------rGGGyGkGGCygg ; cor=; Ncor= a 0 0 0 0 0 0 33.9468 0.408998 0.204499 0 9.20245 1.43149 2.45399 3.88548 2.45399 6.13497 16.7689 14.3149 10.4294 c 0 0 0 0 0 0 3.27198 0.204499 0.408998 0 52.7607 0 1.02249 0.408998 2.24949 68.5072 45.8078 19.8364 20.2454 g 0 0 0 0 0 0 38.6503 98.9775 98.773 99.7955 0 97.7505 53.5787 90.3885 86.2986 16.7689 9.40695 47.2393 52.9652 t 0 0 0 0 0 0 24.1309 0.408998 0.613497 0.204499 38.0368 0.817996 42.9448 5.31697 8.99796 8.58896 28.0164 18.6094 16.3599

M09008_2.00_rc_shift6 (M09008_2.00_rc)
; oligos_6nt_mkv4_m2 versus M09008_2.00_rc; m=9/30; ncol2=14; w=0; offset=4; strand=R; shift=6; score=0.529958; ------dGGGyGkGGcygg ; cor=; Ncor= a 0 0 0 0 0 0 35.022 0.440529 0.440529 0.660793 11.0132 0.881057 2.42291 2.86344 1.98238 6.82819 17.8414 9.91189 4.62555 c 0 0 0 0 0 0 2.86344 0 0.440529 0 43.6123 0 0.881057 0.660793 1.76211 64.5374 40.0881 12.7753 17.1806 g 0 0 0 0 0 0 28.6344 98.4581 99.1189 99.1189 0.220264 98.4581 49.3392 91.1894 91.1894 15.859 13.4361 53.304 62.1145 t 0 0 0 0 0 0 33.4802 1.10132 0 0.220264 45.1542 0.660793 47.3568 5.28634 5.06608 12.7753 28.6344 24.0088 16.0793

M07701_2.00_shift4 (ZNF765)
; oligos_6nt_mkv4_m2 versus M07701_2.00 (ZNF765); m=10/30; ncol2=18; w=0; offset=2; strand=D; shift=4; score=0.529241; ----cCTsGGCyasGCmCt ; cor=; Ncor= a 0 0 0 0 11.7823 3.5228 3.5228 8.67586 7.30055 0.0859221 6.61317 23.8004 48.8956 18.9831 2.49174 13.8416 36.1675 3.5228 23.1183 c 0 0 0 0 56.7803 78.7902 8.32662 25.5132 0.0859221 0.0859221 84.6146 28.956 18.2929 25.5275 0.42961 73.6223 44.0834 85.6594 6.26665 g 0 0 0 0 19.6711 7.29046 11.4248 48.5325 89.0907 98.0238 2.48891 6.95459 24.4793 38.2218 96.3054 8.33161 16.9136 9.35713 14.8567 t 0 0 0 0 11.7663 10.3966 76.7258 17.2785 3.5228 1.80436 6.28327 40.289 8.33217 17.2675 0.773298 4.20452 2.83543 1.46067 55.7583

M08879_2.00_rc_shift5 (KLF12_rc)
; oligos_6nt_mkv4_m2 versus M08879_2.00_rc (KLF12_rc); m=11/30; ncol2=11; w=0; offset=3; strand=R; shift=5; score=0.513269; -----mgGGGCGGGGC--- ; cor=; Ncor= a 0 0 0 0 0 37.8319 24.7788 6.41593 0 0 9.0708 2.21239 0.442478 9.73451 1.32743 13.0531 0 0 0 c 0 0 0 0 0 34.292 3.09735 0 0.221239 0 87.8319 0.221239 0.884956 0 0.663717 80.0885 0 0 0 g 0 0 0 0 0 19.469 58.1858 93.1416 99.5575 100 0.221239 96.0177 79.2035 86.2832 96.4602 2.87611 0 0 0 t 0 0 0 0 0 8.40708 13.9381 0.442478 0.221239 0 2.87611 1.54867 19.469 3.9823 1.54867 3.9823 0 0 0

M08293_2.00_rc_shift6 (KLF1_rc)
; oligos_6nt_mkv4_m2 versus M08293_2.00_rc (KLF1_rc); m=12/30; ncol2=15; w=0; offset=4; strand=R; shift=6; score=0.508739; ------dGGGyGkGGccgg ; cor=; Ncor= a 0 0 0 0 0 0 27.2 1.4 0 0 7.6 0 0 8.4 4 6.4 15.4 16.6 15 c 0 0 0 0 0 0 8.4 0 0 0 51.8 0 1.6 0.2 5.8 64 46.2 23.4 17.6 g 0 0 0 0 0 0 27.6 98.6 100 100 0 100 51.6 86.2 80.8 14.2 16.8 43 45.4 t 0 0 0 0 0 0 36.8 0 0 0 40.6 0 46.8 5.2 9.4 15.4 21.6 17 22

M08868_2.00_rc_shift6 (KLF5_rc)
; oligos_6nt_mkv4_m2 versus M08868_2.00_rc (KLF5_rc); m=13/30; ncol2=14; w=0; offset=4; strand=R; shift=6; score=0.508636; ------wGGGtGkGGctgg ; cor=; Ncor= a 0 0 0 0 0 0 42.2 4.6 0.8 2.4 17.8 4.6 4 1.6 5 10.6 24.8 10.4 15.4 c 0 0 0 0 0 0 3.4 0.4 0.8 3.6 18.4 0.2 1 0 3 63.4 18.2 13.6 12.4 g 0 0 0 0 0 0 20.4 94.4 96.8 93 0.8 94.2 54.4 96.4 83 11 19.2 60.6 50.2 t 0 0 0 0 0 0 34 0.6 1.6 1 63 1 40.6 2 9 15 37.8 15.4 22

M08298_2.00_rc_shift6 (KLF7_rc)
; oligos_6nt_mkv4_m2 versus M08298_2.00_rc (KLF7_rc); m=14/30; ncol2=11; w=0; offset=4; strand=R; shift=6; score=0.493424; ------kGGGCGkgGcc-- ; cor=; Ncor= a 0 0 0 0 0 0 24.055 0 0 0 0 0 0 18.5567 2.0619 9.9656 12.0275 0 0 c 0 0 0 0 0 0 9.622 0 0 0 80.756 0 0 0 0 57.0447 46.7354 0 0 g 0 0 0 0 0 0 37.1134 100 100 100 0 100 67.6976 61.512 88.6598 17.5258 20.2749 0 0 t 0 0 0 0 0 0 29.2096 0 0 0 19.244 0 32.3024 19.9313 9.2784 15.4639 20.9622 0 0

M04464_2.00_rc_shift6 (KLF4_rc)
; oligos_6nt_mkv4_m2 versus M04464_2.00_rc (KLF4_rc); m=15/30; ncol2=11; w=0; offset=4; strand=R; shift=6; score=0.464516; ------tGGGyGkGGyg-- ; cor=; Ncor= a 0 0 0 0 0 0 23.9092 2.9539 0.0192901 0.273117 5.25245 3.70162 3.45759 3.94129 6.10943 9.84729 21.7136 0 0 c 0 0 0 0 0 0 15.0068 0.865475 0.270062 0 61.163 0.244269 4.50207 4.86478 3.12185 35.545 18.0164 0 0 g 0 0 0 0 0 0 22.9896 96.1806 98.6111 99.7269 0 96.0541 38.4297 84.3008 85.8006 22.8541 43.525 0 0 t 0 0 0 0 0 0 38.0943 0 1.09954 0 33.5846 0 53.6107 6.89314 4.96811 31.7536 16.7449 0 0

M08021_2.00_rc_shift6 (M08021_2.00_rc)
; oligos_6nt_mkv4_m2 versus M08021_2.00_rc; m=16/30; ncol2=11; w=0; offset=4; strand=R; shift=6; score=0.455414; ------wGGGyGkGGyy-- ; cor=; Ncor= a 0 0 0 0 0 0 38.206 1.3289 0 0 10.6312 0 3.9867 9.63459 5.6478 9.6346 11.6279 0 0 c 0 0 0 0 0 0 2.6578 0 0 0 36.8771 0 0.996699 0 2.3256 56.1462 39.5349 0 0 g 0 0 0 0 0 0 19.6013 98.6711 100 100 0 100 49.5017 86.7109 87.3754 6.9767 21.2625 0 0 t 0 0 0 0 0 0 39.5349 0 0 0 52.4917 0 45.515 3.6545 4.6512 27.2425 27.5748 0 0

M04456_2.00_rc_shift6 (KLF2_rc)
; oligos_6nt_mkv4_m2 versus M04456_2.00_rc (KLF2_rc); m=17/30; ncol2=11; w=0; offset=4; strand=R; shift=6; score=0.454425; ------kGGGyGkGGys-- ; cor=; Ncor= a 0 0 0 0 0 0 20.752 5.78893 0.324763 0.0561167 0.578991 0 2.87466 1.08241 2.98084 4.88794 17.8682 0 0 c 0 0 0 0 0 0 17.7269 3.61168 2.24628 0.701459 59.5533 0 6.82561 10.9717 6.52945 37.46 26.4348 0 0 g 0 0 0 0 0 0 30.393 90.5994 95.724 99.2424 1.9024 100 42.1117 87.0111 83.6764 19.6371 34.4925 0 0 t 0 0 0 0 0 0 31.1281 0 1.70501 0 37.9653 0 48.188 0.934809 6.81334 38.0149 21.2044 0 0

M04432_2.00_rc_shift6 (KLF12_rc)
; oligos_6nt_mkv4_m2 versus M04432_2.00_rc (KLF12_rc); m=18/30; ncol2=11; w=0; offset=4; strand=R; shift=6; score=0.453222; ------wGGGCGTGGym-- ; cor=; Ncor= a 0 0 0 0 0 0 28.0783 6.56511 0 0.0447685 0.0161204 0.031998 0.255191 0.171081 0.687988 0.467733 32.6035 0 0 c 0 0 0 0 0 0 11.5691 0.041816 0 0 83.9387 0 1.24116 0.627297 0.216933 67.0312 36.1757 0 0 g 0 0 0 0 0 0 15.7603 93.3154 99.8275 99.9041 0.241805 99.968 7.90512 98.9799 96.8204 0.790089 17.2012 0 0 t 0 0 0 0 0 0 44.5923 0.0776583 0.172546 0.051164 15.8033 0 90.5985 0.221772 2.2747 31.711 14.0196 0 0

M08086_2.00_rc_shift6 (KLF5_rc)
; oligos_6nt_mkv4_m2 versus M08086_2.00_rc (KLF5_rc); m=19/30; ncol2=10; w=0; offset=4; strand=R; shift=6; score=0.445053; ------dGGGyGKGGc--- ; cor=; Ncor= a 0 0 0 0 0 0 30.13 3.49717 0 0 24.8182 0 4.15105 11.7772 12.5707 19.0067 0 0 0 c 0 0 0 0 0 0 0 0 0 0 38.0721 0 0 0 0 55.6315 0 0 0 g 0 0 0 0 0 0 41.1065 96.5028 100 100 0 100 70.3034 88.2228 87.4293 14.863 0 0 0 t 0 0 0 0 0 0 28.7635 0 0 0 37.1097 0 25.5455 0 0 10.4989 0 0 0

M08938_2.00_rc_shift4 (SP1_rc)
; oligos_6nt_mkv4_m2 versus M08938_2.00_rc (SP1_rc); m=20/30; ncol2=22; w=0; offset=2; strand=R; shift=4; score=0.443938; ----rgGGGGCGGGGCckG ; cor=; Ncor= a 0 0 0 0 31.4629 19.2385 4.40882 5.81162 0 0.400802 3.20641 1.002 0.200401 6.61323 1.80361 6.01202 5.81162 14.4289 8.21643 c 0 0 0 0 20.6413 10.02 0.801603 0.801603 0.801603 0 95.3908 0 0.801603 0.200401 3.00601 86.7735 59.519 11.2224 17.6353 g 0 0 0 0 33.2665 66.9339 80.9619 93.3868 99.1984 99.5992 0.400802 98.7976 92.5852 91.5832 91.1824 1.40281 19.0381 46.2926 70.5411 t 0 0 0 0 14.6293 3.80762 13.8277 0 0 0 1.002 0.200401 6.41283 1.60321 4.00802 5.81162 15.6313 28.0561 3.60721

M08246_2.00_rc_shift6 (KLF10_rc)
; oligos_6nt_mkv4_m2 versus M08246_2.00_rc (KLF10_rc); m=21/30; ncol2=10; w=0; offset=4; strand=R; shift=6; score=0.442818; ------wGGGyGkGGc--- ; cor=; Ncor= a 0 0 0 0 0 0 33.8557 2.0279 0.3227 0.3225 6.3696 0.5068 0.9675 6.0874 2.8403 5.8745 0 0 0 c 0 0 0 0 0 0 1.8688 0.2082 0.3001 0.8289 44.1938 0.3461 1.8427 1.0613 3.0023 66.0954 0 0 0 g 0 0 0 0 0 0 23.5703 97.6252 99.0777 98.4802 0.2537 98.3641 50.1723 89.9687 87.4843 6.4761 0 0 0 t 0 0 0 0 0 0 40.7052 0.1386 0.2997 0.3685 49.183 0.7831 47.0175 2.8825 6.673 21.554 0 0 0

M08243_2.00_rc_shift6 (KLF4_rc)
; oligos_6nt_mkv4_m2 versus M08243_2.00_rc (KLF4_rc); m=22/30; ncol2=10; w=0; offset=4; strand=R; shift=6; score=0.442817; ------wGGGyGkGGc--- ; cor=; Ncor= a 0 0 0 0 0 0 33.8558 2.028 0.3227 0.3225 6.3696 0.5068 0.9675 6.0875 2.8404 5.8745 0 0 0 c 0 0 0 0 0 0 1.8688 0.2081 0.3 0.8289 44.1938 0.346 1.8427 1.0613 3.0022 66.0954 0 0 0 g 0 0 0 0 0 0 23.5703 97.6252 99.0776 98.4801 0.2536 98.364 50.1722 89.9686 87.4843 6.4761 0 0 0 t 0 0 0 0 0 0 40.7052 0.1386 0.2997 0.3685 49.183 0.7831 47.0176 2.8826 6.6731 21.5541 0 0 0

M10294_2.00_rc_shift6 (SP1_rc)
; oligos_6nt_mkv4_m2 versus M10294_2.00_rc (SP1_rc); m=23/30; ncol2=10; w=0; offset=4; strand=R; shift=6; score=0.436789; ------grGGCrkGgw--- ; cor=; Ncor= a 0 0 0 0 0 0 18.1818 27.2727 0 0 0 27.2727 0 9.09091 9.09091 27.2727 0 0 0 c 0 0 0 0 0 0 9.09091 9.09091 0 0 72.7273 0 9.09091 0 18.1818 18.1818 0 0 0 g 0 0 0 0 0 0 54.5455 54.5455 100 100 18.1818 54.5455 63.6364 72.7273 63.6364 0 0 0 0 t 0 0 0 0 0 0 18.1818 9.09091 0 0 9.09091 18.1818 27.2727 18.1818 9.09091 54.5455 0 0 0

M00341_2.00_rc_shift8 (PAX6_rc)
; oligos_6nt_mkv4_m2 versus M00341_2.00_rc (PAX6_rc); m=24/30; ncol2=10; w=0; offset=6; strand=R; shift=8; score=0.432885; --------GsCCGGGsAs- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 8.94651 4.8922 0.0242149 0.0477758 0.0698091 0.288319 4.55737 2.35712 99.8904 15.626 0 c 0 0 0 0 0 0 0 0 0.566241 49.7814 90.8504 70.7225 0.000919215 3.02319 0.776271 29.8875 0.0195276 33.4127 0 g 0 0 0 0 0 0 0 0 88.3463 38.384 5.80787 23.3072 99.2865 95.2316 93.3865 63.9078 0.0456877 46.0135 0 t 0 0 0 0 0 0 0 0 2.14098 6.94236 3.31751 5.92253 0.642756 1.4569 1.27985 3.84757 0.0443374 4.94776 0

M08300_2.00_rc_shift0 (ZNF549_rc)
; oligos_6nt_mkv4_m2 versus M08300_2.00_rc (ZNF549_rc); m=25/30; ncol2=13; w=-2; offset=-2; strand=R; shift=0; score=0.432403; ATGAAyyGGGCAG------ ; cor=; Ncor= a 100 3.2468 3.6797 76.6234 81.8182 2.1645 11.2554 19.0476 1.2987 5.6277 1.7316 93.0736 1.2987 0 0 0 0 0 0 c 0 1.7316 9.7403 6.71 1.0823 33.1169 28.7879 0 0 3.6797 97.8355 2.1645 0.6494 0 0 0 0 0 0 g 0 19.9134 76.8398 11.039 12.1212 2.381 1.9481 79.2208 98.0519 90.6926 0 3.4632 97.4026 0 0 0 0 0 0 t 0 75.1082 9.7403 5.6277 4.9784 62.3377 58.0087 1.7316 0.6494 0 0.4329 1.2987 0.6494 0 0 0 0 0 0

M09502_2.00_rc_shift6 (KLF5_rc)
; oligos_6nt_mkv4_m2 versus M09502_2.00_rc (KLF5_rc); m=26/30; ncol2=10; w=0; offset=4; strand=R; shift=6; score=0.425687; ------wGGGyGkGGC--- ; cor=; Ncor= a 0 0 0 0 0 0 36.4 11.6 0.1 0.1 8.1 1.5 4.6 5.5 6.2 7.7 0 0 0 c 0 0 0 0 0 0 5.5 0.1 0.1 0.1 42.8 0.1 2.3 0.1 6 75.6 0 0 0 g 0 0 0 0 0 0 22.4 88.2 99.7 99.7 0.1 97.2 40.5 92.2 69.4 1.9 0 0 0 t 0 0 0 0 0 0 35.7 0.1 0.1 0.1 49 1.2 52.6 2.2 18.4 14.8 0 0 0

M08894_2.00_rc_shift6 (KLF4_rc)
; oligos_6nt_mkv4_m2 versus M08894_2.00_rc (KLF4_rc); m=27/30; ncol2=10; w=0; offset=4; strand=R; shift=6; score=0.42567; ------wGGGyGkGGy--- ; cor=; Ncor= a 0 0 0 0 0 0 42 0.8 0.2 1.2 2.6 0.4 0.4 5 1.4 5.4 0 0 0 c 0 0 0 0 0 0 2 0 0 0.4 44.4 0.4 0.4 1.6 3.8 62.8 0 0 0 g 0 0 0 0 0 0 20.4 98.8 99.2 97.8 0.4 99.2 43.8 88.6 88.2 6.8 0 0 0 t 0 0 0 0 0 0 35.6 0.4 0.6 0.6 52.6 0 55.4 4.8 6.6 25 0 0 0

M08326_2.00_rc_shift6 (SP2_rc)
; oligos_6nt_mkv4_m2 versus M08326_2.00_rc (SP2_rc); m=28/30; ncol2=9; w=0; offset=4; strand=R; shift=6; score=0.418159; ------gGGGCGGGg---- ; cor=; Ncor= a 0 0 0 0 0 0 11.4548 0.083612 0.083612 0.083612 0.083612 0.083612 0.083612 18.8127 21.4883 0 0 0 0 c 0 0 0 0 0 0 1.08696 0.083612 0.083612 0.083612 93.3946 0.083612 0.083612 0.083612 14.7993 0 0 0 0 g 0 0 0 0 0 0 64.9666 99.7492 99.7492 99.7492 0.083612 99.7492 97.408 74.3311 63.6288 0 0 0 0 t 0 0 0 0 0 0 22.4916 0.083612 0.083612 0.083612 6.43813 0.083612 2.42475 6.77258 0.083612 0 0 0 0

M08384_2.00_shift4 (ZNF121)
; oligos_6nt_mkv4_m2 versus M08384_2.00 (ZNF121); m=29/30; ncol2=24; w=0; offset=2; strand=D; shift=4; score=0.416497; ----vCkGGvCmrsryaGc ; cor=; Ncor= a 0 0 0 0 28.6074 4.44631 22.2315 1.42617 3.77517 25.5872 0.0838926 56.7953 41.3591 19.8826 27.2651 6.7953 64.5134 1.76174 9.47987 c 0 0 0 0 41.6946 81.6275 5.78859 0.755034 11.4933 37.3322 98.0705 35.9899 9.1443 28.2718 11.8289 50.0839 5.11745 4.11074 62.8356 g 0 0 0 0 27.6007 7.13087 45.0503 95.7215 82.6342 35.9899 1.76174 0.755034 41.3591 41.6946 45.0503 15.1846 6.7953 82.6342 7.46644 t 0 0 0 0 2.09732 6.7953 26.9295 2.09732 2.09732 1.0906 0.0838926 6.45973 8.13758 10.151 15.8557 27.9362 23.5738 11.4933 20.2181

M08290_2.00_rc_shift7 (MAZ_rc)
; oligos_6nt_mkv4_m2 versus M08290_2.00_rc (MAZ_rc); m=30/30; ncol2=9; w=0; offset=5; strand=R; shift=7; score=0.402422; -------GGGmGGGGs--- ; cor=; Ncor= a 0 0 0 0 0 0 0 11.0911 0.059952 0.059952 55.6954 0.059952 0.059952 0.059952 7.73381 7.2542 0 0 0 c 0 0 0 0 0 0 0 0.059952 0.059952 0.059952 35.3118 0.059952 0.059952 0.059952 0.059952 37.7098 0 0 0 g 0 0 0 0 0 0 0 88.789 99.8201 99.8201 0.059952 99.8201 99.8201 99.8201 92.1463 52.8177 0 0 0 t 0 0 0 0 0 0 0 0.059952 0.059952 0.059952 8.93285 0.059952 0.059952 0.059952 0.059952 2.21823 0 0 0

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv4_m1_shift7 ; 24 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv4_m1_shift7 (oligos_6nt_mkv4_m1)
; oligos_6nt_mkv4_m1; m=0 (reference); ncol1=11; shift=7; ncol=18; -------ssGCGGAGCss ; Alignment reference a 0 0 0 0 0 0 0 2477 1752 736 77 179 169 11341 264 412 1936 2079 c 0 0 0 0 0 0 0 5049 6877 2288 14466 487 1016 2434 575 13567 5116 4692 g 0 0 0 0 0 0 0 5416 4352 10937 72 14039 13418 580 13692 492 5302 5971 t 0 0 0 0 0 0 0 1905 1866 886 232 142 244 492 316 376 2493 2105

M07717_2.00_rc_shift5 (ZNF441_rc)
; oligos_6nt_mkv4_m1 versus M07717_2.00_rc (ZNF441_rc); m=1/23; ncol2=12; w=-2; offset=-2; strand=R; shift=5; score=0.666934; -----gGrGgCGGAGyy- ; cor=; Ncor= a 0 0 0 0 0 14.0766 9.57207 36.5991 11.3739 23.0856 0.112613 0.112613 0.112613 78.491 0.112613 0.112613 6.41892 0 c 0 0 0 0 0 22.1847 20.3829 6.41892 7.77027 10.9234 99.6622 0.112613 0.112613 0.112613 0.112613 51.0135 48.3108 0 g 0 0 0 0 0 47.8604 69.9324 56.4189 80.7432 65.4279 0.112613 99.6622 99.6622 21.2838 99.6622 1.46396 18.5811 0 t 0 0 0 0 0 15.8784 0.112613 0.563063 0.112613 0.563063 0.112613 0.112613 0.112613 0.112613 0.112613 47.4099 26.6892 0

M07585_2.00_shift7 (ZNF331)
; oligos_6nt_mkv4_m1 versus M07585_2.00 (ZNF331); m=2/23; ncol2=12; w=0; offset=0; strand=D; shift=7; score=0.643739; -------yTGCwGAGCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 3.09406 19.9257 2.59901 0.123762 52.599 1.11386 95.6683 6.55941 1.60891 21.4109 9.03465 c 0 0 0 0 0 0 0 63.9851 4.08416 2.10396 99.6287 0.618812 0.123762 0.123762 0.123762 98.1436 69.9257 79.8267 g 0 0 0 0 0 0 0 3.58911 6.55941 95.1733 0.123762 1.60891 98.6386 3.58911 92.698 0.123762 0.123762 0.618812 t 0 0 0 0 0 0 0 29.3317 69.4307 0.123762 0.123762 45.1733 0.123762 0.618812 0.618812 0.123762 8.5396 10.5198

M02698_2.00_shift6 (M02698_2.00)
; oligos_6nt_mkv4_m1 versus M02698_2.00; m=3/23; ncol2=11; w=-1; offset=-1; strand=D; shift=6; score=0.599595; ------csCGCTGAGsy- ; cor=; Ncor= a 0 0 0 0 0 0 14 16 0 0 4.0404 4.0404 8.08081 96 4 2 15.1515 0 c 0 0 0 0 0 0 45 27 91.9192 5 93.9394 2.0202 0 0 4 55 32.3232 0 g 0 0 0 0 0 0 23 55 4.0404 93 0 2.0202 85.8586 2 92 26 24.2424 0 t 0 0 0 0 0 0 18 2 4.0404 2 2.0202 91.9192 6.06061 2 0 17 28.2828 0

M11037_2.00_shift6 (M11037_2.00)
; oligos_6nt_mkv4_m1 versus M11037_2.00; m=4/23; ncol2=11; w=-1; offset=-1; strand=D; shift=6; score=0.599595; ------csCGCTGAGsy- ; cor=; Ncor= a 0 0 0 0 0 0 14 16 0 0 4.0404 4.0404 8.08081 96 4 2 15.1515 0 c 0 0 0 0 0 0 45 27 91.9192 5 93.9394 2.0202 0 0 4 55 32.3232 0 g 0 0 0 0 0 0 23 55 4.0404 93 0 2.0202 85.8586 2 92 26 24.2424 0 t 0 0 0 0 0 0 18 2 4.0404 2 2.0202 91.9192 6.06061 2 0 17 28.2828 0

M08298_2.00_rc_shift6 (KLF7_rc)
; oligos_6nt_mkv4_m1 versus M08298_2.00_rc (KLF7_rc); m=5/23; ncol2=11; w=-1; offset=-1; strand=R; shift=6; score=0.590347; ------kGGGCGkgGcc- ; cor=; Ncor= a 0 0 0 0 0 0 24.055 0 0 0 0 0 0 18.5567 2.0619 9.9656 12.0275 0 c 0 0 0 0 0 0 9.622 0 0 0 80.756 0 0 0 0 57.0447 46.7354 0 g 0 0 0 0 0 0 37.1134 100 100 100 0 100 67.6976 61.512 88.6598 17.5258 20.2749 0 t 0 0 0 0 0 0 29.2096 0 0 0 19.244 0 32.3024 19.9313 9.2784 15.4639 20.9622 0

M08296_2.00_rc_shift4 (SP4_rc)
; oligos_6nt_mkv4_m1 versus M08296_2.00_rc (SP4_rc); m=6/23; ncol2=15; w=-3; offset=-3; strand=R; shift=4; score=0.557199; ----rgGRGGcGGrGCcd ; cor=; Ncor= a 0 0 0 0 32.996 19.0283 7.8947 30.3644 0.2024 0 19.8381 0 1.8219 35.0202 15.1822 7.4899 8.2996 25.9109 c 0 0 0 0 5.8704 4.8583 0 1.0121 0 0 67.6113 1.417 2.6316 3.4413 7.085 69.8381 48.583 14.9798 g 0 0 0 0 45.3441 63.9676 70.2429 68.6235 99.7976 99.7976 0 98.583 83.4008 56.2753 75.9109 11.1336 18.8259 26.5182 t 0 0 0 0 15.7895 12.1457 21.8623 0 0 0.2024 12.5506 0 12.1457 5.2632 1.8219 11.5385 24.2915 32.5911

M08323_2.00_rc_shift6 (KLF15_rc)
; oligos_6nt_mkv4_m1 versus M08323_2.00_rc (KLF15_rc); m=7/23; ncol2=15; w=-1; offset=-1; strand=R; shift=6; score=0.546444; ------GRGGcGGrGccg ; cor=; Ncor= a 0 0 0 0 0 0 17.0683 28.3133 0 0.6024 22.2892 0 0 41.7671 12.0482 19.2771 24.498 15.0602 c 0 0 0 0 0 0 3.2129 0.8032 0 0.2008 58.8353 0 3.012 1.2048 0 46.1847 36.1446 8.8353 g 0 0 0 0 0 0 69.0763 70.8835 100 99.1968 0 100 88.755 47.5904 85.3414 24.8996 23.0924 62.4498 t 0 0 0 0 0 0 10.6426 0 0 0 18.8755 0 8.2329 9.4378 2.6104 9.6386 16.2651 13.6546

M06160_2.00_rc_shift4 (M06160_2.00_rc)
; oligos_6nt_mkv4_m1 versus M06160_2.00_rc; m=8/23; ncol2=15; w=-3; offset=-3; strand=R; shift=4; score=0.516183; ----rgkGGGCGkGGCyw ; cor=; Ncor= a 0 0 0 0 36.7909 22.3473 13.3545 16.8521 0 0 5.88235 0.158983 0 21.7806 6.83625 7.47218 18.442 43.04 c 0 0 0 0 13.128 7.55627 1.43084 0 0 0 90.461 0 0 1.27186 5.40541 74.2448 42.4483 14.4 g 0 0 0 0 27.2285 62.701 42.1304 81.876 99.3641 99.2051 0 99.2051 60.5723 72.496 81.2401 0.953895 11.2878 8.96 t 0 0 0 0 22.8525 7.3955 43.0843 1.27186 0.63593 0.794913 3.6566 0.63593 39.4277 4.45151 6.51828 17.3291 27.8219 33.6

M08879_2.00_rc_shift5 (KLF12_rc)
; oligos_6nt_mkv4_m1 versus M08879_2.00_rc (KLF12_rc); m=9/23; ncol2=11; w=-2; offset=-2; strand=R; shift=5; score=0.508145; -----mgGGGCGGGGC-- ; cor=; Ncor= a 0 0 0 0 0 37.8319 24.7788 6.41593 0 0 9.0708 2.21239 0.442478 9.73451 1.32743 13.0531 0 0 c 0 0 0 0 0 34.292 3.09735 0 0.221239 0 87.8319 0.221239 0.884956 0 0.663717 80.0885 0 0 g 0 0 0 0 0 19.469 58.1858 93.1416 99.5575 100 0.221239 96.0177 79.2035 86.2832 96.4602 2.87611 0 0 t 0 0 0 0 0 8.40708 13.9381 0.442478 0.221239 0 2.87611 1.54867 19.469 3.9823 1.54867 3.9823 0 0

M10300_2.00_rc_shift4 (SP1_rc)
; oligos_6nt_mkv4_m1 versus M10300_2.00_rc (SP1_rc); m=10/23; ncol2=13; w=-3; offset=-3; strand=R; shift=4; score=0.503018; ----rggGGGCGGGgyb- ; cor=; Ncor= a 0 0 0 0 29.6296 22.2222 12.963 15.7407 0 0 17.5926 1.85185 0 19.4444 15.7407 2.77778 8.33333 0 c 0 0 0 0 19.4444 18.5185 9.25926 0.925926 0 1.85185 74.0741 4.62963 0.925926 4.62963 9.25926 50.9259 37.037 0 g 0 0 0 0 32.4074 51.8519 60.1852 82.4074 100 98.1481 0 91.6667 91.6667 70.3704 66.6667 19.4444 29.6296 0 t 0 0 0 0 18.5185 7.40741 17.5926 0.925926 0 0 8.33333 1.85185 7.40741 5.55556 8.33333 26.8519 25 0

M07616_2.00_rc_shift11 (ZNF610_rc)
; oligos_6nt_mkv4_m1 versus M07616_2.00_rc (ZNF610_rc); m=11/23; ncol2=9; w=0; offset=4; strand=R; shift=11; score=0.492568; -----------GGAGCGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0.0814332 0.0814332 99.7557 0.0814332 0.0814332 0.0814332 0.0814332 c 0 0 0 0 0 0 0 0 0 0 0 0.0814332 0.0814332 0.0814332 0.0814332 99.7557 0.0814332 14.4137 g 0 0 0 0 0 0 0 0 0 0 0 99.7557 99.7557 0.0814332 99.7557 0.0814332 99.7557 79.886 t 0 0 0 0 0 0 0 0 0 0 0 0.0814332 0.0814332 0.0814332 0.0814332 0.0814332 0.0814332 5.61889

M01913_2.00_shift5 (DNMT1)
; oligos_6nt_mkv4_m1 versus M01913_2.00 (DNMT1); m=12/23; ncol2=10; w=-2; offset=-2; strand=D; shift=5; score=0.492547; -----ssymgCGGsr--- ; cor=; Ncor= a 0 0 0 0 0 23.4138 22.394 17.2639 27.4855 19.1374 0.00313502 0.0301987 4.00612 21.9725 30.6596 0 0 0 c 0 0 0 0 0 28.0314 26.8105 34.4193 27.4855 16.4717 99.971 20.9062 13.9827 26.5703 20.1448 0 0 0 g 0 0 0 0 0 29.7648 30.5326 23.072 24.8699 43.4514 0.0197398 79.0471 77.3099 27.6546 30.9678 0 0 0 t 0 0 0 0 0 18.79 20.2629 25.2448 20.1591 20.9396 0 0.0165734 4.70122 23.8026 18.2278 0 0 0

M08326_2.00_rc_shift6 (SP2_rc)
; oligos_6nt_mkv4_m1 versus M08326_2.00_rc (SP2_rc); m=13/23; ncol2=9; w=-1; offset=-1; strand=R; shift=6; score=0.479975; ------gGGGCGGGg--- ; cor=; Ncor= a 0 0 0 0 0 0 11.4548 0.083612 0.083612 0.083612 0.083612 0.083612 0.083612 18.8127 21.4883 0 0 0 c 0 0 0 0 0 0 1.08696 0.083612 0.083612 0.083612 93.3946 0.083612 0.083612 0.083612 14.7993 0 0 0 g 0 0 0 0 0 0 64.9666 99.7492 99.7492 99.7492 0.083612 99.7492 97.408 74.3311 63.6288 0 0 0 t 0 0 0 0 0 0 22.4916 0.083612 0.083612 0.083612 6.43813 0.083612 2.42475 6.77258 0.083612 0 0 0

M08327_2.00_rc_shift11 (ZNF610_rc)
; oligos_6nt_mkv4_m1 versus M08327_2.00_rc (ZNF610_rc); m=14/23; ncol2=9; w=0; offset=4; strand=R; shift=11; score=0.475146; -----------GGAGCGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 11.3271 0.0670241 99.7989 0.0670241 0.0670241 0.0670241 0.0670241 c 0 0 0 0 0 0 0 0 0 0 0 5.42895 0.0670241 0.0670241 0.0670241 99.7989 0.0670241 4.89276 g 0 0 0 0 0 0 0 0 0 0 0 75.4021 99.7989 0.0670241 99.7989 0.0670241 99.7989 86.9303 t 0 0 0 0 0 0 0 0 0 0 0 7.84182 0.0670241 0.0670241 0.0670241 0.0670241 0.0670241 8.10992

M09259_2.00_shift8 (M09259_2.00)
; oligos_6nt_mkv4_m1 versus M09259_2.00; m=15/23; ncol2=7; w=0; offset=1; strand=D; shift=8; score=0.469995; --------sCCGGrr--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2.50053 0 0 0 0 57.5069 44.1707 0 0 0 c 0 0 0 0 0 0 0 0 59.1686 100 100 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 35.8303 0 0 100 100 42.4931 55.8293 0 0 0 t 0 0 0 0 0 0 0 0 2.50053 0 0 0 0 0 0 0 0 0

M09257_2.00_shift8 (MECP2)
; oligos_6nt_mkv4_m1 versus M09257_2.00 (MECP2); m=16/23; ncol2=7; w=0; offset=1; strand=D; shift=8; score=0.469995; --------sCCGGrr--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2.50053 0 0 0 0 57.5069 44.1707 0 0 0 c 0 0 0 0 0 0 0 0 59.1686 100 100 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 35.8303 0 0 100 100 42.4931 55.8293 0 0 0 t 0 0 0 0 0 0 0 0 2.50053 0 0 0 0 0 0 0 0 0

M00339_2.00_shift3 (PAX6)
; oligos_6nt_mkv4_m1 versus M00339_2.00 (PAX6); m=17/23; ncol2=13; w=-4; offset=-4; strand=D; shift=3; score=0.450314; ---grsacGgcGGwkc-- ; cor=; Ncor= a 0 0 0 22.6447 29.7397 17.8071 47.9093 5.06887 9.3262 9.19812 19.9138 2.37697 4.7031 48.1988 17.6587 19.9528 0 0 c 0 0 0 22.6447 20.3186 37.2742 17.409 65.1331 10.7374 9.44277 49.6149 11.617 4.7031 16.391 17.6587 40.1415 0 0 g 0 0 0 32.0658 29.6231 27.1116 16.603 15.3081 69.8687 60.5757 21.0027 83.6291 85.8907 7.2146 37.8474 19.9528 0 0 t 0 0 0 22.6447 20.3186 17.8071 18.0787 14.4899 10.0677 20.7834 9.4686 2.37697 4.7031 28.1956 26.8352 19.9528 0 0

M00224_2.00_rc_shift6 (KLF1_rc)
; oligos_6nt_mkv4_m1 versus M00224_2.00_rc (KLF1_rc); m=18/23; ncol2=8; w=-1; offset=-1; strand=R; shift=6; score=0.438301; ------dGGGCGkr---- ; cor=; Ncor= a 0 0 0 0 0 0 28.5511 0.110619 0.110619 0.110619 0.110619 0.110619 0.110619 49.8756 0 0 0 0 c 0 0 0 0 0 0 0.142045 0.110619 0.110619 0.110619 99.6681 0.110619 0.110619 0.124378 0 0 0 0 g 0 0 0 0 0 0 42.7557 99.6681 99.6681 99.6681 0.110619 99.6681 66.4823 49.8756 0 0 0 0 t 0 0 0 0 0 0 28.5511 0.110619 0.110619 0.110619 0.110619 0.110619 33.2965 0.124378 0 0 0 0

M01919_2.00_shift6 (M01919_2.00)
; oligos_6nt_mkv4_m1 versus M01919_2.00; m=19/23; ncol2=7; w=-1; offset=-1; strand=D; shift=6; score=0.426674; ------tyasCGg----- ; cor=; Ncor= a 0 0 0 0 0 0 24.0571 23.1338 33.9485 12.3203 0.0637745 2.27505 16.5154 0 0 0 0 0 c 0 0 0 0 0 0 24.7897 26.3454 22.7563 31.5398 98.2581 0.00291467 13.254 0 0 0 0 0 g 0 0 0 0 0 0 24.2988 20.5178 21.4311 37.76 0.000141614 97.7099 45.3448 0 0 0 0 0 t 0 0 0 0 0 0 26.8544 30.0029 21.8641 18.3798 1.67799 0.0121795 24.8858 0 0 0 0 0

M08873_2.00_rc_shift0 (SP4_rc)
; oligos_6nt_mkv4_m1 versus M08873_2.00_rc (SP4_rc); m=20/23; ncol2=20; w=-7; offset=-7; strand=R; shift=0; score=0.420824; grgmargrGGCGGrGccr ; cor=; Ncor= a 22.2445 26.6533 14.0281 40.481 52.7054 34.6693 23.0461 34.2685 6.81363 3.60721 12.4248 5.61122 5.41082 35.2705 21.4429 19.8397 24.8497 32.6653 c 24.8497 14.8297 18.0361 25.0501 11.2224 2.60521 1.80361 2.00401 1.2024 0.400802 76.9539 1.60321 1.80361 3.00601 1.002 59.7194 41.483 7.81563 g 45.491 46.2926 60.521 24.8497 22.4449 54.9098 63.7275 61.523 90.1804 93.5872 1.002 85.5711 86.1723 56.7134 74.7495 14.2285 12.4248 36.4729 t 7.41483 12.2244 7.41483 9.61924 13.6273 7.81563 11.4228 2.20441 1.80361 2.40481 9.61924 7.21443 6.61323 5.01002 2.80561 6.21242 21.2425 23.0461

M08975_2.00_rc_shift0 (M08975_2.00_rc)
; oligos_6nt_mkv4_m1 versus M08975_2.00_rc; m=21/23; ncol2=20; w=-7; offset=-7; strand=R; shift=0; score=0.420824; grgmargrGGCGGrGccr ; cor=; Ncor= a 22.2445 26.6533 14.0281 40.481 52.7054 34.6693 23.0461 34.2685 6.81363 3.60721 12.4248 5.61122 5.41082 35.2705 21.4429 19.8397 24.8497 32.6653 c 24.8497 14.8297 18.0361 25.0501 11.2224 2.60521 1.80361 2.00401 1.2024 0.400802 76.9539 1.60321 1.80361 3.00601 1.002 59.7194 41.483 7.81563 g 45.491 46.2926 60.521 24.8497 22.4449 54.9098 63.7275 61.523 90.1804 93.5872 1.002 85.5711 86.1723 56.7134 74.7495 14.2285 12.4248 36.4729 t 7.41483 12.2244 7.41483 9.61924 13.6273 7.81563 11.4228 2.20441 1.80361 2.40481 9.61924 7.21443 6.61323 5.01002 2.80561 6.21242 21.2425 23.0461

M08954_2.00_rc_shift11 (ZBTB14_rc)
; oligos_6nt_mkv4_m1 versus M08954_2.00_rc (ZBTB14_rc); m=22/23; ncol2=9; w=0; offset=4; strand=R; shift=11; score=0.41039; -----------gGwGCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 17.6715 9.35551 67.5676 2.4948 1.0395 1.2474 7.69231 c 0 0 0 0 0 0 0 0 0 0 0 19.5426 9.77131 0 1.0395 96.8815 0.4158 91.8919 g 0 0 0 0 0 0 0 0 0 0 0 48.8565 77.9626 0.2079 95.0104 1.4553 97.2973 0.2079 t 0 0 0 0 0 0 0 0 0 0 0 13.9293 2.9106 32.2245 1.4553 0.623701 1.0395 0.2079

M02541_2.00_shift6 (M02541_2.00)
; oligos_6nt_mkv4_m1 versus M02541_2.00; m=23/23; ncol2=8; w=-1; offset=-1; strand=D; shift=6; score=0.409065; ------CCCGCGGG---- ; cor=; Ncor= a 0 0 0 0 0 0 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0 0 0 0 c 0 0 0 0 0 0 97.1154 97.1154 97.1154 0.961538 97.1154 0.961538 0.961538 0.961538 0 0 0 0 g 0 0 0 0 0 0 0.961538 0.961538 0.961538 97.1154 0.961538 97.1154 97.1154 97.1154 0 0 0 0 t 0 0 0 0 0 0 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0 0 0 0

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv5_m2_shift5 ; 50 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv5_m2_shift5 (oligos_7nt_mkv5_m2)
; oligos_7nt_mkv5_m2; m=0 (reference); ncol1=12; shift=5; ncol=17; -----ssCGGGAGCGss ; Alignment reference a 0 0 0 0 0 2127 1670 632 453 259 280 11132 219 653 499 2161 2367 c 0 0 0 0 0 4325 4864 12339 530 419 620 1002 402 12203 1161 4237 4172 g 0 0 0 0 0 5906 6164 1011 13028 13618 13375 1969 13666 1203 12176 6478 6161 t 0 0 0 0 0 2096 1756 472 443 158 179 351 167 395 618 1578 1754

M05860_2.00_rc_shift5 (M05860_2.00_rc)
; oligos_7nt_mkv5_m2 versus M05860_2.00_rc; m=1/49; ncol2=13; w=0; offset=0; strand=R; shift=5; score=0.660975; -----tGCGkGGGCGkr ; cor=; Ncor= a 0 0 0 0 0 14.5 17.5 13.1 0.1 0.1 7.7 0.1 0.1 7.6 4.6 7.3 27.9 c 0 0 0 0 0 22.2 7.5 71 0.1 0.2 0.1 0.1 0.1 69.5 0.9 8.6 19.3 g 0 0 0 0 0 22.3 71.6 3.2 99.8 35.1 92.1 99.8 99.7 0.7 93.5 51.5 31.8 t 0 0 0 0 0 41 3.5 12.8 0.1 64.5 0.1 0.1 0.1 22.2 1 32.6 21

M08996_2.00_rc_shift4 (M08996_2.00_rc)
; oligos_7nt_mkv5_m2 versus M08996_2.00_rc; m=2/49; ncol2=14; w=-1; offset=-1; strand=R; shift=4; score=0.639103; ----gkGcGkGGGcGGr ; cor=; Ncor= a 0 0 0 0 22.7642 13.6179 5.0813 15.4472 0.203252 0.406504 3.45528 0 0 14.8374 0 2.43902 26.2195 c 0 0 0 0 19.3089 17.2764 3.86179 67.0732 0 0.203252 0.203252 0.406504 0 61.1789 0.609756 2.84553 8.53659 g 0 0 0 0 47.1545 33.9431 89.6341 1.21951 98.7805 54.4715 96.3415 98.9837 100 0 98.9837 77.8455 54.878 t 0 0 0 0 10.7724 35.1626 1.42276 16.2602 1.01626 44.9187 0 0.609756 0 23.9837 0.406504 16.8699 10.3659

M07928_2.00_rc_shift3 (EGR1_rc)
; oligos_7nt_mkv5_m2 versus M07928_2.00_rc (EGR1_rc); m=3/49; ncol2=15; w=-2; offset=-2; strand=R; shift=3; score=0.632833; ---ggkGCGkGGGCGGr ; cor=; Ncor= a 0 0 0 20.8226 19.5373 15.9383 4.6272 7.45501 0 0 5.9126 0 0 4.3702 0.5141 6.1697 26.2211 c 0 0 0 23.6504 23.1362 22.108 1.7995 88.689 0 1.0283 0 0 0 88.1748 0 2.5707 19.7943 g 0 0 0 43.4447 47.0437 28.5347 93.3162 0 100 61.9537 94.0874 100 100 0 98.7147 76.3496 40.1028 t 0 0 0 12.0823 10.2828 33.419 0.2571 3.856 0 37.018 0 0 0 7.455 0.7712 14.91 13.8817

M07723_2.00_rc_shift4 (ZNF860_rc)
; oligos_7nt_mkv5_m2 versus M07723_2.00_rc (ZNF860_rc); m=4/49; ncol2=15; w=-1; offset=-1; strand=R; shift=4; score=0.605395; ----rgCaGGGAGCagv ; cor=; Ncor= a 0 0 0 0 46.4062 20.7812 5.15625 67.6562 0.15625 0.15625 0.78125 99.5313 0.78125 2.65625 57.0312 24.5312 30.1563 c 0 0 0 0 17.6563 10.7813 70.7812 7.03125 0.15625 0.15625 0.15625 0.15625 0.15625 83.9063 17.6563 15.7812 30.7812 g 0 0 0 0 30.7813 62.0312 11.4063 1.40625 99.5313 99.5313 98.9062 0.15625 98.9062 8.90625 13.9063 46.4062 27.6563 t 0 0 0 0 5.15625 6.40625 12.6563 23.9063 0.15625 0.15625 0.15625 0.15625 0.15625 4.53125 11.4062 13.2812 11.4062

M00765_2.00_rc_shift8 (M00765_2.00_rc)
; oligos_7nt_mkv5_m2 versus M00765_2.00_rc; m=5/49; ncol2=9; w=0; offset=3; strand=R; shift=8; score=0.586666; --------gKGGGCGkg ; cor=; Ncor= a 0 0 0 0 0 0 0 0 24.973 0 0 0 0 0 0 0 17.435 c 0 0 0 0 0 0 0 0 7.56959 0.00455751 0.00455751 8.49137 0.00455751 91.4995 0.00455751 0.00455751 17.435 g 0 0 0 0 0 0 0 0 59.8878 69.4134 99.9863 91.4995 99.9863 8.49137 99.9863 58.2071 47.6951 t 0 0 0 0 0 0 0 0 7.56959 30.5774 0.00455751 0.00455751 0.00455751 0.00455751 0.00455751 41.7838 17.435

M08290_2.00_rc_shift8 (MAZ_rc)
; oligos_7nt_mkv5_m2 versus M08290_2.00_rc (MAZ_rc); m=6/49; ncol2=9; w=0; offset=3; strand=R; shift=8; score=0.582664; --------GGGmGGGGs ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11.0911 0.059952 0.059952 55.6954 0.059952 0.059952 0.059952 7.73381 7.2542 c 0 0 0 0 0 0 0 0 0.059952 0.059952 0.059952 35.3118 0.059952 0.059952 0.059952 0.059952 37.7098 g 0 0 0 0 0 0 0 0 88.789 99.8201 99.8201 0.059952 99.8201 99.8201 99.8201 92.1463 52.8177 t 0 0 0 0 0 0 0 0 0.059952 0.059952 0.059952 8.93285 0.059952 0.059952 0.059952 0.059952 2.21823

M09034_2.00_shift3 (E2F6)
; oligos_7nt_mkv5_m2 versus M09034_2.00 (E2F6); m=7/49; ncol2=13; w=-2; offset=-2; strand=D; shift=3; score=0.572613; ---rrGGCGGGArrrr- ; cor=; Ncor= a 0 0 0 33.8 26.2 15.4 1 21.4 4 2.4 7.2 94.2 51.2 38.4 27.8 27.6 0 c 0 0 0 14.8 3.4 12.6 1.6 70.8 1.8 4.8 4.4 3.2 3.6 10.8 21.8 16.2 0 g 0 0 0 34.2 55.6 70 96.4 1.2 89.4 89.6 87.2 1.4 43.6 43.8 37.8 42.6 0 t 0 0 0 17.2 14.8 2 1 6.6 4.8 3.2 1.2 1.2 1.6 7 12.6 13.6 0

M07616_2.00_rc_shift9 (ZNF610_rc)
; oligos_7nt_mkv5_m2 versus M07616_2.00_rc (ZNF610_rc); m=8/49; ncol2=9; w=0; offset=4; strand=R; shift=9; score=0.57253; ---------GGAGCGGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0.0814332 0.0814332 99.7557 0.0814332 0.0814332 0.0814332 0.0814332 8.55049 c 0 0 0 0 0 0 0 0 0 0.0814332 0.0814332 0.0814332 0.0814332 99.7557 0.0814332 14.4137 84.772 g 0 0 0 0 0 0 0 0 0 99.7557 99.7557 0.0814332 99.7557 0.0814332 99.7557 79.886 0.0814332 t 0 0 0 0 0 0 0 0 0 0.0814332 0.0814332 0.0814332 0.0814332 0.0814332 0.0814332 5.61889 6.59609

M09038_2.00_shift4 (M09038_2.00)
; oligos_7nt_mkv5_m2 versus M09038_2.00; m=9/49; ncol2=10; w=-1; offset=-1; strand=D; shift=4; score=0.569924; ----gsGCGGGArs--- ; cor=; Ncor= a 0 0 0 0 18.6747 12.249 0.60241 7.42972 2.00803 0.401606 6.62651 98.3936 44.1767 20.8835 0 0 0 c 0 0 0 0 11.245 25.7028 2.40964 91.7671 3.01205 2.61044 1.00402 0.401606 8.43373 26.3052 0 0 0 g 0 0 0 0 57.0281 61.8474 95.3815 0 94.5783 96.1847 92.1687 0.803213 47.1888 47.1888 0 0 0 t 0 0 0 0 13.0522 0.200803 1.60643 0.803213 0.401606 0.803213 0.200803 0.401606 0.200803 5.62249 0 0 0

M08109_2.00_shift4 (E2F4)
; oligos_7nt_mkv5_m2 versus M08109_2.00 (E2F4); m=10/49; ncol2=11; w=-1; offset=-1; strand=D; shift=4; score=0.563871; ----gsGCGGGArrr-- ; cor=; Ncor= a 0 0 0 0 14.4835 8.25346 0 0 0 1.4377 0.798722 96.0064 66.7199 37.9127 26.7838 0 0 c 0 0 0 0 19.7018 27.1565 0.585729 100 0 11.6081 2.18317 0 0 18.5836 20.9265 0 0 g 0 0 0 0 45.1544 64.59 99.4143 0 100 86.9542 97.0181 3.99361 33.2801 38.3387 32.8009 0 0 t 0 0 0 0 20.6603 0 0 0 0 0 0 0 0 5.16507 19.4888 0 0

M08107_2.00_shift4 (E2F6)
; oligos_7nt_mkv5_m2 versus M08107_2.00 (E2F6); m=11/49; ncol2=11; w=-1; offset=-1; strand=D; shift=4; score=0.560651; ----rGGCGGGArrv-- ; cor=; Ncor= a 0 0 0 0 29.4523 16.0319 0 24.3743 0.253899 0 0.725426 100 61.1534 35.8361 27.9652 0 0 c 0 0 0 0 2.9017 14.7262 0 70.8741 0 0 1.05187 0 0 16.4672 25.6075 0 0 g 0 0 0 0 50.9975 69.2419 100 0 99.7461 100 98.2227 0 38.8466 41.1679 32.9706 0 0 t 0 0 0 0 16.6485 0 0 4.75154 0 0 0 0 0 6.52884 13.4567 0 0

M08349_2.00_rc_shift6 (EGR3_rc)
; oligos_7nt_mkv5_m2 versus M08349_2.00_rc (EGR3_rc); m=12/49; ncol2=9; w=0; offset=1; strand=R; shift=6; score=0.556246; ------GhGGRGGmG-- ; cor=; Ncor= a 0 0 0 0 0 0 0.0647668 30.1166 0.0647668 0.0647668 26.2306 0.0647668 0.0647668 29.0803 0.0647668 0 0 c 0 0 0 0 0 0 24.158 40.2202 0.0647668 0.0647668 0.0647668 0.0647668 0.0647668 49.0285 0.0647668 0 0 g 0 0 0 0 0 0 75.7124 0.0647668 99.8057 81.671 73.6399 99.8057 99.8057 0.0647668 99.8057 0 0 t 0 0 0 0 0 0 0.0647668 29.5984 0.0647668 18.1995 0.0647668 0.0647668 0.0647668 21.8264 0.0647668 0 0

M01862_2.00_rc_shift8 (M01862_2.00_rc)
; oligos_7nt_mkv5_m2 versus M01862_2.00_rc; m=13/49; ncol2=9; w=0; offset=3; strand=R; shift=8; score=0.554627; --------rkGGGCGkd ; cor=; Ncor= a 0 0 0 0 0 0 0 0 31.2927 0 0 0 0 0 0 0 27.9294 c 0 0 0 0 0 0 0 0 6.56255 0.00439598 0.00439598 0.00439598 0.00439598 99.9868 0.00439598 0.00439598 18.4418 g 0 0 0 0 0 0 0 0 55.5822 59.9631 99.9868 99.9868 99.9868 0.00439598 99.9868 57.9255 26.8904 t 0 0 0 0 0 0 0 0 6.56255 40.0281 0.00439598 0.00439598 0.00439598 0.00439598 0.00439598 42.0657 26.7384

M08327_2.00_rc_shift9 (ZNF610_rc)
; oligos_7nt_mkv5_m2 versus M08327_2.00_rc (ZNF610_rc); m=14/49; ncol2=9; w=0; offset=4; strand=R; shift=9; score=0.552212; ---------GGAGCGGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 11.3271 0.0670241 99.7989 0.0670241 0.0670241 0.0670241 0.0670241 4.08847 c 0 0 0 0 0 0 0 0 0 5.42895 0.0670241 0.0670241 0.0670241 99.7989 0.0670241 4.89276 91.2198 g 0 0 0 0 0 0 0 0 0 75.4021 99.7989 0.0670241 99.7989 0.0670241 99.7989 86.9303 0.0670241 t 0 0 0 0 0 0 0 0 0 7.84182 0.0670241 0.0670241 0.0670241 0.0670241 0.0670241 8.10992 4.62466

M04698_2.00_shift7 (E2F2)
; oligos_7nt_mkv5_m2 versus M04698_2.00 (E2F2); m=15/49; ncol2=11; w=0; offset=2; strand=D; shift=7; score=0.550039; -------sGkGsGcGCG ; cor=; Ncor= a 0 0 0 0 0 0 0 11.3372 0 12.2294 3.82775 2.82686 2.18579 8.95522 4 8.26772 0 c 0 0 0 0 0 0 0 36.6279 2.18579 19.3723 10.5263 63.2509 0 66.791 6.5 70.4724 2.18579 g 0 0 0 0 0 0 0 44.7674 97.8142 42.6407 85.6459 25.4417 97.8142 11.9403 89.5 11.0236 97.8142 t 0 0 0 0 0 0 0 7.26744 0 25.7576 0 8.48057 0 12.3134 0 10.2362 0

M08302_2.00_rc_shift6 (EGR2_rc)
; oligos_7nt_mkv5_m2 versus M08302_2.00_rc (EGR2_rc); m=16/49; ncol2=9; w=0; offset=1; strand=R; shift=6; score=0.549234; ------GhGkGGGcG-- ; cor=; Ncor= a 0 0 0 0 0 0 0.0739645 25.5178 0.0739645 0.0739645 15.7544 0.0739645 0.0739645 21.0799 0.0739645 0 0 c 0 0 0 0 0 0 10.7249 45.932 0.0739645 0.0739645 0.0739645 0.0739645 0.0739645 55.6953 0.0739645 0 0 g 0 0 0 0 0 0 89.1272 0.0739645 99.7781 61.9083 84.0976 99.7781 99.7781 0.0739645 99.7781 0 0 t 0 0 0 0 0 0 0.0739645 28.4763 0.0739645 37.9438 0.0739645 0.0739645 0.0739645 23.1509 0.0739645 0 0

M00242_2.00_rc_shift8 (KLF11_rc)
; oligos_7nt_mkv5_m2 versus M00242_2.00_rc (KLF11_rc); m=17/49; ncol2=8; w=0; offset=3; strand=R; shift=8; score=0.544097; --------GGGGGCGk- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 7.7454 0.052521 0.052521 0.052521 0.052521 0.052521 0.052521 0.0712251 0 c 0 0 0 0 0 0 0 0 0.0766871 0.052521 0.052521 5.30462 0.052521 84.0861 0.052521 0.0712251 0 g 0 0 0 0 0 0 0 0 92.1012 78.834 99.8424 94.5903 94.5903 10.5567 99.8424 64.1738 0 t 0 0 0 0 0 0 0 0 0.0766871 21.0609 0.052521 0.052521 5.30462 5.30462 0.052521 35.6838 0

M00241_2.00_rc_shift8 (KLF11_rc)
; oligos_7nt_mkv5_m2 versus M00241_2.00_rc (KLF11_rc); m=18/49; ncol2=8; w=0; offset=3; strand=R; shift=8; score=0.543154; --------GGGGGCGk- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 6.71543 0.0499002 0.0499002 0.0499002 0.0499002 0.0499002 0.0499002 0.0766871 0 c 0 0 0 0 0 0 0 0 0.0664894 0.0499002 0.0499002 5.03992 0.0499002 79.8902 0.0499002 0.0766871 0 g 0 0 0 0 0 0 0 0 93.1516 74.9002 99.8503 89.8703 94.8603 10.0299 99.8503 61.4264 0 t 0 0 0 0 0 0 0 0 0.0664894 25 0.0499002 5.03992 5.03992 10.0299 0.0499002 38.4202 0

M08108_2.00_shift4 (TFDP1,TFDP2,TFDP3)
; oligos_7nt_mkv5_m2 versus M08108_2.00 (TFDP1,TFDP2,TFDP3); m=19/49; ncol2=11; w=-1; offset=-1; strand=D; shift=4; score=0.542452; ----gsGCGGGAAss-- ; cor=; Ncor= a 0 0 0 0 20.4783 13.1041 2.39163 1.39512 0.697559 1.79372 1.34529 92.4265 81.9631 23.1689 18.9836 0 0 c 0 0 0 0 24.4644 34.0807 3.53762 93.9711 2.69058 3.98605 1.59442 1.19581 8.47035 32.2372 30.0947 0 0 g 0 0 0 0 38.7145 46.8361 92.7753 1.09616 96.2631 92.9248 95.6153 4.88291 6.82611 32.287 32.287 0 0 t 0 0 0 0 16.3428 5.97907 1.29547 3.53762 0.348779 1.29547 1.44494 1.49477 2.74041 12.3069 18.6348 0 0

M09043_2.00_shift3 (M09043_2.00)
; oligos_7nt_mkv5_m2 versus M09043_2.00; m=20/49; ncol2=12; w=-2; offset=-2; strand=D; shift=3; score=0.539427; ---kkGGCGGGArrg-- ; cor=; Ncor= a 0 0 0 22.1259 20.179 14.7722 2.54144 11.5871 5.78776 0.858185 1.02822 80.8149 58.2812 25.976 18.631 0 0 c 0 0 0 16.8228 6.42487 11.8017 2.82431 85.7663 2.89362 6.48752 0.968297 0.31514 5.2133 17.0811 22.2715 0 0 g 0 0 0 29.6425 46.0562 71.9488 94.011 0.223295 88.9192 91.8483 96.9688 18.67 35.8988 51.9152 48.3293 0 0 t 0 0 0 31.4089 27.3399 1.47737 0.623281 2.4233 2.3994 0.805946 1.0347 0.199908 0.606722 5.02773 10.7682 0 0

M07949_2.00_shift4 (ELF1,ETV3L)
; oligos_7nt_mkv5_m2 versus M07949_2.00 (ELF1,ETV3L); m=21/49; ncol2=11; w=-1; offset=-1; strand=D; shift=4; score=0.538639; ----asSCGGAAGyG-- ; cor=; Ncor= a 0 0 0 0 54.2857 14.9451 3.5165 8.1319 0 0 100 100 5.4945 7.2527 12.967 0 0 c 0 0 0 0 10.989 49.8901 69.4505 91.8681 0 0 0 0 2.4176 28.1319 13.6264 0 0 g 0 0 0 0 19.1209 28.1319 25.9341 0 100 100 0 0 92.0879 4.1758 69.2308 0 0 t 0 0 0 0 15.6044 7.03299 1.0989 0 0 0 0 0 0 60.4396 4.1758 0 0

M07652_2.00_rc_shift7 (ZNF543_rc)
; oligos_7nt_mkv5_m2 versus M07652_2.00_rc (ZNF543_rc); m=22/49; ncol2=12; w=0; offset=2; strand=R; shift=7; score=0.510851; -------sgGGMGGGGs ; cor=; Ncor= a 0 0 0 0 0 0 0 13.4073 13.8105 0.100806 0.504032 73.4879 0.100806 3.32661 20.2621 2.92339 18.6492 c 0 0 0 0 0 0 0 29.1331 20.6653 0.100806 0.504032 25.9073 0.100806 8.97177 9.375 0.100806 30.746 g 0 0 0 0 0 0 0 50.9073 51.3105 88.4073 98.8911 0.504032 99.6976 87.6008 70.2621 96.875 50.1008 t 0 0 0 0 0 0 0 6.55242 14.2137 11.3911 0.100806 0.100806 0.100806 0.100806 0.100806 0.100806 0.504032

M07754_2.00_rc_shift7 (ZNF468_rc)
; oligos_7nt_mkv5_m2 versus M07754_2.00_rc (ZNF468_rc); m=23/49; ncol2=12; w=0; offset=2; strand=R; shift=7; score=0.510029; -------dGGGAGGGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 34.5652 4.71014 0.362319 0.0724638 96.3043 0.362319 0.0724638 11.3768 0.652174 4.42029 c 0 0 0 0 0 0 0 8.76812 0.942029 0.362319 0.0724638 0.652174 0.0724638 0.0724638 0.0724638 0.362319 9.92754 g 0 0 0 0 0 0 0 30.7971 93.4058 98.3333 99.7826 0.0724638 99.4928 99.7826 88.4783 98.913 84.7101 t 0 0 0 0 0 0 0 25.8696 0.942029 0.942029 0.0724638 2.97101 0.0724638 0.0724638 0.0724638 0.0724638 0.942029

M08287_2.00_rc_shift8 (PATZ1_rc)
; oligos_7nt_mkv5_m2 versus M08287_2.00_rc (PATZ1_rc); m=24/49; ncol2=8; w=0; offset=3; strand=R; shift=8; score=0.495038; --------GGGmGGGG- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 16 0 0 42.6667 0 0 11.2 5.8667 0 c 0 0 0 0 0 0 0 0 0 0 0 35.2 0 0 0 0 0 g 0 0 0 0 0 0 0 0 84 100 100 0 100 100 81.0667 94.1333 0 t 0 0 0 0 0 0 0 0 0 0 0 22.1333 0 0 7.7333 0 0

M07707_2.00_rc_shift6 (ZNF846_rc)
; oligos_7nt_mkv5_m2 versus M07707_2.00_rc (ZNF846_rc); m=25/49; ncol2=6; w=0; offset=1; strand=R; shift=6; score=0.49448; ------sCGGGA----- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 c 0 0 0 0 0 0 50 100 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 50 0 100 100 100 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

M07940_2.00_shift3 (E2F6)
; oligos_7nt_mkv5_m2 versus M07940_2.00 (E2F6); m=26/49; ncol2=11; w=-2; offset=-2; strand=D; shift=3; score=0.494301; ---gggGCGGGArr--- ; cor=; Ncor= a 0 0 0 24.1379 24.5211 17.2414 0 12.6437 9.9617 0 0 100 60.5363 40.9962 0 0 0 c 0 0 0 24.5211 12.2605 20.6897 0 83.1417 0 0 0 0 2.2989 18.3908 0 0 0 g 0 0 0 32.9502 47.5096 62.0689 100 0 90.0383 100 100 0 37.1648 36.7816 0 0 0 t 0 0 0 18.3908 15.7088 0 0 4.2146 0 0 0 0 0 3.8314 0 0 0

M08954_2.00_rc_shift9 (ZBTB14_rc)
; oligos_7nt_mkv5_m2 versus M08954_2.00_rc (ZBTB14_rc); m=27/49; ncol2=9; w=0; offset=4; strand=R; shift=9; score=0.493965; ---------gGwGCGCG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 17.6715 9.35551 67.5676 2.4948 1.0395 1.2474 7.69231 1.0395 c 0 0 0 0 0 0 0 0 0 19.5426 9.77131 0 1.0395 96.8815 0.4158 91.8919 0.831601 g 0 0 0 0 0 0 0 0 0 48.8565 77.9626 0.2079 95.0104 1.4553 97.2973 0.2079 97.921 t 0 0 0 0 0 0 0 0 0 13.9293 2.9106 32.2245 1.4553 0.623701 1.0395 0.2079 0.2079

M07939_2.00_shift3 (E2F6)
; oligos_7nt_mkv5_m2 versus M07939_2.00 (E2F6); m=28/49; ncol2=11; w=-2; offset=-2; strand=D; shift=3; score=0.492294; ---rrgGCGGGArr--- ; cor=; Ncor= a 0 0 0 28.6713 28.3217 16.0839 0 13.986 0 0 0 100 66.7832 35.3147 0 0 0 c 0 0 0 22.7273 8.3916 18.8811 0 82.5175 0 0 2.0979 0 0 20.6294 0 0 0 g 0 0 0 29.021 47.9021 65.035 100 0 98.6014 100 97.9021 0 33.2168 34.2657 0 0 0 t 0 0 0 19.5804 15.3846 0 0 3.4965 1.3986 0 0 0 0 9.7902 0 0 0

M00632_2.00_rc_shift8 (M00632_2.00_rc)
; oligos_7nt_mkv5_m2 versus M00632_2.00_rc; m=29/49; ncol2=10; w=0; offset=3; strand=R; shift=8; score=0.491058; --------rgGGGCGkr ; cor=; Ncor= a 0 0 0 0 0 0 0 0 42.2132 9.43238 0.0225276 0.0225276 0.0225276 0.0225276 0.0225276 0.0225276 34.3604 c 0 0 0 0 0 0 0 0 10.9058 2.03687 0.0225276 0.0225276 0.0225276 91.3738 0.0225276 0.0225276 14.1167 g 0 0 0 0 0 0 0 0 35.9751 66.7367 99.9324 99.9324 99.9324 0.0225276 99.9324 42.936 37.4062 t 0 0 0 0 0 0 0 0 10.9058 21.794 0.0225276 0.0225276 0.0225276 8.58113 0.0225276 57.0189 14.1167

M07941_2.00_shift3 (E2F6)
; oligos_7nt_mkv5_m2 versus M07941_2.00 (E2F6); m=30/49; ncol2=11; w=-2; offset=-2; strand=D; shift=3; score=0.490333; ---gggGCGGGArr--- ; cor=; Ncor= a 0 0 0 20.7031 22.2656 13.6719 0 8.20311 0 0 0 100 64.4531 37.1094 0 0 0 c 0 0 0 21.875 7.03121 22.6562 0 84.7657 0 0 0 0 0 14.4531 0 0 0 g 0 0 0 35.1562 51.5626 63.6719 100 0 99.6094 100 99.2188 0 35.5469 39.8438 0 0 0 t 0 0 0 22.2656 19.1406 0 0 7.03121 0.3906 0 0.7812 0 0 8.59379 0 0 0

M00622_2.00_rc_shift7 (M00622_2.00_rc)
; oligos_7nt_mkv5_m2 versus M00622_2.00_rc; m=31/49; ncol2=8; w=0; offset=2; strand=R; shift=7; score=0.488551; -------cGkGGGcG-- ; cor=; Ncor= a 0 0 0 0 0 0 0 8.36106 0.0302663 0.0302663 3.0569 0.0302663 0.0302663 6.69108 4.20133 0 0 c 0 0 0 0 0 0 0 66.5973 0.0302663 9.11017 0.0302663 0.0302663 0.0302663 56.6245 0.0415973 0 0 g 0 0 0 0 0 0 0 8.36106 99.9092 33.3232 96.8826 99.9092 99.9092 23.3356 91.5557 0 0 t 0 0 0 0 0 0 0 16.6805 0.0302663 57.5363 0.0302663 0.0302663 0.0302663 13.3489 4.20133 0 0

M07947_2.00_shift1 (ELF1,ETV3L)
; oligos_7nt_mkv5_m2 versus M07947_2.00 (ELF1,ETV3L); m=32/49; ncol2=15; w=-4; offset=-4; strand=D; shift=1; score=0.486036; -sgrassCGGAAGygs- ; cor=; Ncor= a 0 19.9105 21.7002 40.0447 58.3892 13.6465 4.9217 10.2908 0 0.2237 99.3289 100 7.38259 9.1723 14.5414 13.6465 0 c 0 40.2685 24.3848 20.1342 10.7383 48.9933 66.8904 89.7092 0 0 0 0 2.4609 29.9776 18.7919 30.8725 0 g 0 28.6353 43.1767 30.8725 16.7785 29.0828 27.7405 0 100 99.7763 0.6711 0 89.7091 7.1588 60.8501 49.217 0 t 0 11.1857 10.7383 8.94851 14.094 8.2774 0.4474 0 0 0 0 0 0.4474 53.6913 5.8166 6.264 0

M00224_2.00_rc_shift9 (KLF1_rc)
; oligos_7nt_mkv5_m2 versus M00224_2.00_rc (KLF1_rc); m=33/49; ncol2=8; w=0; offset=4; strand=R; shift=9; score=0.476428; ---------dGGGCGkr ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 28.5511 0.110619 0.110619 0.110619 0.110619 0.110619 0.110619 49.8756 c 0 0 0 0 0 0 0 0 0 0.142045 0.110619 0.110619 0.110619 99.6681 0.110619 0.110619 0.124378 g 0 0 0 0 0 0 0 0 0 42.7557 99.6681 99.6681 99.6681 0.110619 99.6681 66.4823 49.8756 t 0 0 0 0 0 0 0 0 0 28.5511 0.110619 0.110619 0.110619 0.110619 0.110619 33.2965 0.124378

M09036_2.00_shift2 (E2F4)
; oligos_7nt_mkv5_m2 versus M09036_2.00 (E2F4); m=34/49; ncol2=13; w=-3; offset=-3; strand=D; shift=2; score=0.476234; --srgGGCGGGRard-- ; cor=; Ncor= a 0 0 14.6 27.8 24.4 10 0.4 1.2 3.6 0.4 9 71.6 53.6 38.2 25.4 0 0 c 0 0 25.8 9.6 10 18.8 3.6 97.4 0.2 3.8 1.4 2.2 20 18.8 11.4 0 0 g 0 0 50.6 46.2 52.6 69.6 95.8 0 94.6 95 89.4 25 22.2 28.2 30.6 0 0 t 0 0 9 16.4 13 1.6 0.2 1.4 1.6 0.8 0.2 1.2 4.2 14.8 32.6 0 0

M09505_2.00_rc_shift8 (MAZ_rc)
; oligos_7nt_mkv5_m2 versus M09505_2.00_rc (MAZ_rc); m=35/49; ncol2=8; w=0; offset=3; strand=R; shift=8; score=0.474146; --------GGGgGGGG- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.9 0.1 13.2 19 9 4.7 4.2 0.1 0 c 0 0 0 0 0 0 0 0 0.1 0.1 8.2 14.9 6.1 5.8 0.1 0.1 0 g 0 0 0 0 0 0 0 0 98.9 99.7 70.2 60.7 84.8 89.4 95.6 99.7 0 t 0 0 0 0 0 0 0 0 0.1 0.1 8.4 5.4 0.1 0.1 0.1 0.1 0

M06090_2.00_rc_shift6 (M06090_2.00_rc)
; oligos_7nt_mkv5_m2 versus M06090_2.00_rc; m=36/49; ncol2=8; w=0; offset=1; strand=R; shift=6; score=0.473838; ------mCrGwAGY--- ; cor=; Ncor= a 0 0 0 0 0 0 36.3636 0 58.3333 0 41.6667 100 0 0 0 0 0 c 0 0 0 0 0 0 63.6364 100 8.33333 0 0 0 0 72.7273 0 0 0 g 0 0 0 0 0 0 0 0 33.3333 100 8.33333 0 100 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 50 0 0 27.2727 0 0 0

M07626_2.00_rc_shift7 (ZNF282_rc)
; oligos_7nt_mkv5_m2 versus M07626_2.00_rc (ZNF282_rc); m=37/49; ncol2=6; w=0; offset=2; strand=R; shift=7; score=0.465304; -------sGGGAG---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.0795234 0.0795234 0.0795234 0.0795234 99.7614 0.0795234 0 0 0 0 c 0 0 0 0 0 0 0 42.9372 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 0 0 0 0 g 0 0 0 0 0 0 0 56.9037 99.7614 99.7614 99.7614 0.0795234 99.7614 0 0 0 0 t 0 0 0 0 0 0 0 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 0.0795234 0 0 0 0

M08326_2.00_rc_shift9 (SP2_rc)
; oligos_7nt_mkv5_m2 versus M08326_2.00_rc (SP2_rc); m=38/49; ncol2=9; w=0; offset=4; strand=R; shift=9; score=0.464899; ---------gGGGCGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 11.4548 0.083612 0.083612 0.083612 0.083612 0.083612 0.083612 18.8127 c 0 0 0 0 0 0 0 0 0 1.08696 0.083612 0.083612 0.083612 93.3946 0.083612 0.083612 0.083612 g 0 0 0 0 0 0 0 0 0 64.9666 99.7492 99.7492 99.7492 0.083612 99.7492 97.408 74.3311 t 0 0 0 0 0 0 0 0 0 22.4916 0.083612 0.083612 0.083612 6.43813 0.083612 2.42475 6.77258

M07927_2.00_rc_shift4 (EGR1_rc)
; oligos_7nt_mkv5_m2 versus M07927_2.00_rc (EGR1_rc); m=39/49; ncol2=20; w=-1; offset=-1; strand=R; shift=4; score=0.461697; ----gkGCGkGGGCGGg ; cor=; Ncor= a 0 0 0 0 19.5021 15.3527 3.527 8.7137 0 0 5.3942 0 0 9.1286 1.2448 5.39421 24.8963 c 0 0 0 0 24.2739 18.6722 4.3568 85.6846 0 0.4149 0 0 0 71.5768 0.2075 2.4896 21.9917 g 0 0 0 0 45.8506 28.8382 92.1162 0 100 56.0166 94.6058 100 100 0 97.5104 76.3486 41.0788 t 0 0 0 0 10.3734 37.1369 0 5.6017 0 43.5685 0 0 0 19.2946 1.0373 15.7676 12.0332

M02888_2.00_rc_shift8 (KLF16_rc)
; oligos_7nt_mkv5_m2 versus M02888_2.00_rc (KLF16_rc); m=40/49; ncol2=11; w=0; offset=3; strand=R; shift=8; score=0.458658; --------GKGGGcGKG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 18.164 2.39378 5.61343 0 0 15.0093 1.10852 0 2.6087 c 0 0 0 0 0 0 0 0 1.12911 1.13704 0.173611 0.493218 0 60.0372 0.991832 1.94766 0.347826 g 0 0 0 0 0 0 0 0 79.136 70.3172 93.287 99.3835 99.5062 6.4432 94.049 28.0584 93.4493 t 0 0 0 0 0 0 0 0 1.57094 26.152 0.925926 0.123305 0.493827 18.5102 3.85064 69.9939 3.5942

M07929_2.00_rc_shift5 (EGR1_rc)
; oligos_7nt_mkv5_m2 versus M07929_2.00_rc (EGR1_rc); m=41/49; ncol2=20; w=0; offset=0; strand=R; shift=5; score=0.449667; -----kGCGkGGGCGGg ; cor=; Ncor= a 0 0 0 0 0 12.9293 5.45451 12.1212 0 0 4.8485 0 0 10.5051 1.6162 6.8687 24.8485 c 0 0 0 0 0 17.1717 4.2424 80.202 0.202 0.808099 0 0.202 0 69.6969 0 0.8081 21.6162 g 0 0 0 0 0 29.2929 90.3031 0.6061 99.798 47.6768 95.1515 99.798 100 0 97.9798 73.9394 40 t 0 0 0 0 0 40.6061 0 7.0707 0 51.5151 0 0 0 19.798 0.404 18.3838 13.5354

M08387_2.00_rc_shift9 (ZBTB14_rc)
; oligos_7nt_mkv5_m2 versus M08387_2.00_rc (ZBTB14_rc); m=42/49; ncol2=9; w=0; offset=4; strand=R; shift=9; score=0.448694; ---------gGsGCGCG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 10.1735 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 c 0 0 0 0 0 0 0 0 0 20.2681 0.0788644 49.6057 0.0788644 99.7634 0.0788644 99.7634 0.0788644 g 0 0 0 0 0 0 0 0 0 57.1767 99.7634 37.6183 99.7634 0.0788644 99.7634 0.0788644 99.7634 t 0 0 0 0 0 0 0 0 0 12.3817 0.0788644 12.6972 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644

M09030_2.00_shift1 (E2F1)
; oligos_7nt_mkv5_m2 versus M09030_2.00 (E2F1); m=43/49; ncol2=14; w=-4; offset=-4; strand=D; shift=1; score=0.448509; -rgrgGGCGGGArrr-- ; cor=; Ncor= a 0 32.8 23.6 27.2 19 8.2 1.8 5.6 1.6 2.2 6.8 85.6 65.4 40 27.2 0 0 c 0 16 20 21 10.2 20 0.6 92.2 0.8 8.2 3.4 2 6.4 14 16.4 0 0 g 0 37.8 45.2 29 46.6 70.4 96.6 0.4 95.8 89 89 9 27.2 36.6 39.6 0 0 t 0 13.4 11.2 22.8 24.2 1.4 1 1.8 1.8 0.6 0.8 3.4 1 9.4 16.8 0 0

M08279_2.00_rc_shift9 (ZNF37A_rc)
; oligos_7nt_mkv5_m2 versus M08279_2.00_rc (ZNF37A_rc); m=44/49; ncol2=9; w=0; offset=4; strand=R; shift=9; score=0.445563; ---------GGArrrrr ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0.0852402 0.0852402 98.648 35.3773 35.6209 25.7923 54.2603 33.0565 c 0 0 0 0 0 0 0 0 0 0.0852402 0.0852402 0.0852402 0.0852402 3.82683 14.6661 2.79393 0.0852402 g 0 0 0 0 0 0 0 0 0 98.39 99.7443 0.0852402 63.8721 58.2745 55.0712 38.7955 65.9349 t 0 0 0 0 0 0 0 0 0 1.43956 0.0852402 1.1815 0.665369 2.2778 4.47036 4.1502 0.923434

M09259_2.00_shift5 (M09259_2.00)
; oligos_7nt_mkv5_m2 versus M09259_2.00; m=45/49; ncol2=7; w=0; offset=0; strand=D; shift=5; score=0.439319; -----sCCGGrr----- ; cor=; Ncor= a 0 0 0 0 0 2.50053 0 0 0 0 57.5069 44.1707 0 0 0 0 0 c 0 0 0 0 0 59.1686 100 100 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 35.8303 0 0 100 100 42.4931 55.8293 0 0 0 0 0 t 0 0 0 0 0 2.50053 0 0 0 0 0 0 0 0 0 0 0

M09257_2.00_shift5 (MECP2)
; oligos_7nt_mkv5_m2 versus M09257_2.00 (MECP2); m=46/49; ncol2=7; w=0; offset=0; strand=D; shift=5; score=0.439319; -----sCCGGrr----- ; cor=; Ncor= a 0 0 0 0 0 2.50053 0 0 0 0 57.5069 44.1707 0 0 0 0 0 c 0 0 0 0 0 59.1686 100 100 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 35.8303 0 0 100 100 42.4931 55.8293 0 0 0 0 0 t 0 0 0 0 0 2.50053 0 0 0 0 0 0 0 0 0 0 0

M08275_2.00_rc_shift0 (ZFP64_rc)
; oligos_7nt_mkv5_m2 versus M08275_2.00_rc (ZFP64_rc); m=47/49; ncol2=15; w=-5; offset=-5; strand=R; shift=0; score=0.426725; sGGgsCCCGGGavys-- ; cor=; Ncor= a 18.1481 9.2593 0 18.8889 14.0741 0.7407 0 0 6.6667 0 5.1852 62.963 26.6667 14.4444 11.1111 0 0 c 29.2593 11.4815 17.4074 11.1111 32.5926 97.4074 100 100 8.5185 0 0 15.5556 31.1111 42.963 40 0 0 g 41.8519 71.8519 80 58.5185 51.8519 0 0 0 84.8148 100 94.8148 14.8148 34.4444 16.6667 41.1111 0 0 t 10.7407 7.4074 2.5926 11.4815 1.4815 1.8519 0 0 0 0 0 6.6667 7.7778 25.9259 7.7778 0 0

M09041_2.00_shift2 (M09041_2.00)
; oligos_7nt_mkv5_m2 versus M09041_2.00; m=48/49; ncol2=12; w=-3; offset=-3; strand=D; shift=2; score=0.426488; --grgGGCGGGrmr--- ; cor=; Ncor= a 0 0 17.8 37.2 17 5.8 1.4 1.6 2.4 7.8 2.2 57.4 50.6 35.6 0 0 0 c 0 0 16.2 11.4 2.4 10.4 0.8 92.4 0.8 1.8 1.6 4.2 28.2 20.2 0 0 0 g 0 0 50.8 33.6 64.4 82.6 97.4 0.4 93.4 88.4 96.2 37 16.4 30.2 0 0 0 t 0 0 15.2 17.8 16.2 1.2 0.4 5.6 3.4 2 0 1.4 4.8 14 0 0 0

M09521_2.00_shift3 (E2F1)
; oligos_7nt_mkv5_m2 versus M09521_2.00 (E2F1); m=49/49; ncol2=10; w=-2; offset=-2; strand=D; shift=3; score=0.420916; ---cwGGCGGGAA---- ; cor=; Ncor= a 0 0 0 21.3 25.7 6.2 0.2 0.2 0.2 0.2 0.2 99.5 94.9 0 0 0 0 c 0 0 0 42.4 15.8 14.7 0.2 99.5 0.2 8 1.5 0.2 0.2 0 0 0 0 g 0 0 0 22.4 21 79 99.5 0.2 99.5 91.7 98.2 0.2 4.8 0 0 0 0 t 0 0 0 14.1 37.7 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0 0 0 0

One-to-n matrix alignment; reference matrix: positions_7nt_m5_shift3 ; 12 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
positions_7nt_m5_shift3 (positions_7nt_m5)
; positions_7nt_m5; m=0 (reference); ncol1=12; shift=3; ncol=15; ---ssGTGCGCACss ; Alignment reference a 0 0 0 1191 1096 128 207 178 222 465 51 4928 56 1488 724 c 0 0 0 1944 1843 270 705 139 5164 373 5856 384 5770 1797 2365 g 0 0 0 2365 1797 5770 384 5856 373 5164 139 705 270 1843 1944 t 0 0 0 724 1488 56 4928 51 465 222 178 207 128 1096 1191

M00136_2.00_shift4 (M00136_2.00)
; positions_7nt_m5 versus M00136_2.00; m=1/11; ncol2=9; w=0; offset=1; strand=D; shift=4; score=0.640439; ----CGTGyGCAm-- ; cor=; Ncor= a 0 0 0 0 0.490196 0.247525 0.247525 0.247525 0.247525 0.247525 0.247525 99.2574 49.5098 0 0 c 0 0 0 0 98.5294 0.247525 0.247525 0.247525 49.7525 0.247525 99.2574 0.247525 49.5098 0 0 g 0 0 0 0 0.490196 99.2574 0.247525 99.2574 0.247525 99.2574 0.247525 0.247525 0.490196 0 0 t 0 0 0 0 0.490196 0.247525 99.2574 0.247525 49.7525 0.247525 0.247525 0.247525 0.490196 0 0

M08954_2.00_shift5 (ZBTB14)
; positions_7nt_m5 versus M08954_2.00 (ZBTB14); m=2/11; ncol2=9; w=0; offset=2; strand=D; shift=5; score=0.559261; -----GCGCGCwCc- ; cor=; Ncor= a 0 0 0 0 0 8.93971 0.2079 0.2079 1.0395 0.623701 1.4553 32.2245 2.9106 13.9293 0 c 0 0 0 0 0 9.77131 97.921 0.2079 97.2973 1.4553 95.0104 0.2079 77.9626 48.8565 0 g 0 0 0 0 0 75.8836 0.831601 91.8919 0.4158 96.8815 1.0395 0 9.77131 19.5426 0 t 0 0 0 0 0 5.40541 1.0395 7.69231 1.2474 1.0395 2.4948 67.5676 9.35551 17.6715 0

M04696_2.00_shift5 (E2F2)
; positions_7nt_m5 versus M04696_2.00 (E2F2); m=3/11; ncol2=11; w=0; offset=2; strand=D; shift=5; score=0.55435; -----GCGCGCGCgy ; cor=; Ncor= a 0 0 0 0 0 0.657829 2.03349 2.1097 0.595179 0.375101 0.091818 2.46262 0.665273 10.9302 6.57546 c 0 0 0 0 0 0.30898 89.3633 0.29134 96.3396 0.932685 99.0818 1.17268 92.3018 18.4499 32.2595 g 0 0 0 0 0 96.8006 3.91976 97.5688 1.52763 98.459 0.122424 94.9086 5.38871 62.2604 7.70521 t 0 0 0 0 0 2.23263 4.68347 0.0301386 1.53755 0.233171 0.703938 1.45607 1.64417 8.35951 53.4598

M08387_2.00_shift5 (ZBTB14)
; positions_7nt_m5 versus M08387_2.00 (ZBTB14); m=4/11; ncol2=9; w=0; offset=2; strand=D; shift=5; score=0.545112; -----sCGCGCsCc- ; cor=; Ncor= a 0 0 0 0 0 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 12.6972 0.0788644 12.3817 0 c 0 0 0 0 0 36.6719 99.7634 0.0788644 99.7634 0.0788644 99.7634 37.6183 99.7634 57.1767 0 g 0 0 0 0 0 57.4921 0.0788644 99.7634 0.0788644 99.7634 0.0788644 49.6057 0.0788644 20.2681 0 t 0 0 0 0 0 5.7571 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 10.1735 0

M00336_2.00_rc_shift5 (PAX6_rc)
; positions_7nt_m5 versus M00336_2.00_rc (PAX6_rc); m=5/11; ncol2=8; w=0; offset=2; strand=R; shift=5; score=0.544251; -----GTGTGCAY-- ; cor=; Ncor= a 0 0 0 0 0 22.2345 6.71543 0.0664894 0.0664894 0.0664894 0.0664894 99.8005 0.0766871 0 0 c 0 0 0 0 0 0.110619 0.0664894 0.0664894 6.71543 0.0664894 99.8005 0.0664894 69.0951 0 0 g 0 0 0 0 0 77.5442 13.3644 99.8005 0.0664894 99.8005 0.0664894 0.0664894 0.0766871 0 0 t 0 0 0 0 0 0.110619 79.8537 0.0664894 93.1516 0.0664894 0.0664894 0.0664894 30.7515 0 0

M08981_2.00_rc_shift2 (M08981_2.00_rc)
; positions_7nt_m5 versus M08981_2.00_rc; m=6/11; ncol2=17; w=-1; offset=-1; strand=R; shift=2; score=0.510494; --syktTGCrCACGg ; cor=; Ncor= a 0 0 13.3242 19.2308 4.3956 16.4835 0 2.47253 0 67.3077 0 75 0 4.3956 19.7802 c 0 0 31.1813 29.3956 5.21978 17.8571 0 0 100 0 97.2527 12.9121 100 2.47253 4.3956 g 0 0 43.544 10.4396 27.1978 12.3626 0 97.5275 0 32.6923 2.74725 2.47253 0 84.6154 54.1209 t 0 0 11.9505 40.9341 63.1868 53.2967 100 0 0 0 0 9.61538 0 8.51648 21.7033

M08942_2.00_rc_shift2 (MTF1_rc)
; positions_7nt_m5 versus M08942_2.00_rc (MTF1_rc); m=7/11; ncol2=17; w=-1; offset=-1; strand=R; shift=2; score=0.510494; --syktTGCrCACGg ; cor=; Ncor= a 0 0 13.3242 19.2308 4.3956 16.4835 0 2.47253 0 67.3077 0 75 0 4.3956 19.7802 c 0 0 31.1813 29.3956 5.21978 17.8571 0 0 100 0 97.2527 12.9121 100 2.47253 4.3956 g 0 0 43.544 10.4396 27.1978 12.3626 0 97.5275 0 32.6923 2.74725 2.47253 0 84.6154 54.1209 t 0 0 11.9505 40.9341 63.1868 53.2967 100 0 0 0 0 9.61538 0 8.51648 21.7033

M09525_2.00_rc_shift3 (TFDP2,TFDP3_rc)
; positions_7nt_m5 versus M09525_2.00_rc (TFDP2,TFDP3_rc); m=8/11; ncol2=8; w=0; offset=0; strand=R; shift=3; score=0.503622; ---wrgCGCGC---- ; cor=; Ncor= a 0 0 0 29.7 48.7 23.6 19.8 0.1 0.1 8.2 0.3 0 0 0 0 c 0 0 0 0.1 11.3 0.1 70 0.1 99.7 0.1 76.1 0 0 0 0 g 0 0 0 15.1 25.7 66.4 0.1 99.7 0.1 91.6 3.4 0 0 0 0 t 0 0 0 55.1 14.3 9.9 10.1 0.1 0.1 0.1 20.2 0 0 0 0

M08177_2.00_shift1 (NRF1)
; positions_7nt_m5 versus M08177_2.00 (NRF1); m=9/11; ncol2=11; w=-2; offset=-2; strand=D; shift=1; score=0.502295; -GCGCmTGCGCr--- ; cor=; Ncor= a 0 13.019 13.4732 4.23875 0 32.7422 0 0 0 0 1.60035 48.551 0 0 0 c 0 8.10986 86.5268 4.08737 86.8512 40.2682 8.7154 0 93.8149 7.54758 98.3997 17.3875 0 0 0 g 0 78.8711 0 91.6739 10.1211 20.2206 11.4187 100 0 92.4524 0 34.0614 0 0 0 t 0 0 0 0 3.02768 6.76903 79.8659 0 6.18512 0 0 0 0 0 0

M01964_2.00_shift2 (M01964_2.00)
; positions_7nt_m5 versus M01964_2.00; m=10/11; ncol2=10; w=-1; offset=-1; strand=D; shift=2; score=0.494419; --agsGCGCGCg--- ; cor=; Ncor= a 0 0 31.8805 19.3453 9.92319 0.0135428 0.0135428 0.0135428 0.0135428 0.0135428 23.0338 24.2693 0 0 0 c 0 0 22.7065 17.8255 60.0146 0.0135428 99.9594 0.0135428 99.9594 20.2501 72.3521 24.6407 0 0 0 g 0 0 22.7065 40.2863 30.0486 99.9594 0.0135428 99.9594 0.0135428 79.7228 2.30703 26.3382 0 0 0 t 0 0 22.7065 22.5428 0.0135428 0.0135428 0.0135428 0.0135428 0.0135428 0.0135428 2.30703 24.7518 0 0 0

M04698_2.00_shift0 (E2F2)
; positions_7nt_m5 versus M04698_2.00 (E2F2); m=11/11; ncol2=11; w=-3; offset=-3; strand=D; shift=0; score=0.424062; sGkGsGcGCGC---- ; cor=; Ncor= a 11.3372 0 12.2294 3.82775 2.82686 2.18579 8.95522 4 8.26772 0 1.67598 0 0 0 0 c 36.6279 2.18579 19.3723 10.5263 63.2509 0 66.791 6.5 70.4724 2.18579 70.9497 0 0 0 0 g 44.7674 97.8142 42.6407 85.6459 25.4417 97.8142 11.9403 89.5 11.0236 97.8142 22.905 0 0 0 0 t 7.26744 0 25.7576 0 8.48057 0 12.3134 0 10.2362 0 4.46927 0 0 0 0

One-to-n matrix alignment; reference matrix: positions_7nt_m4_shift2 ; 26 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
positions_7nt_m4_shift2 (positions_7nt_m4)
; positions_7nt_m4; m=0 (reference); ncol1=12; shift=2; ncol=14; --sgGGTGCACCcs ; Alignment reference a 0 0 922 1241 118 104 282 59 136 4261 72 259 992 993 c 0 0 1770 1137 165 470 289 183 4930 476 4662 4766 1938 1623 g 0 0 1623 1938 4766 4662 476 4930 183 289 470 165 1137 1770 t 0 0 993 992 259 72 4261 136 59 282 104 118 1241 922

M04386_2.00_shift4 (ZNF263)
; positions_7nt_m4 versus M04386_2.00 (ZNF263); m=1/25; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.601191; ----vGTsCTCCCy ; cor=; Ncor= a 0 0 0 0 29.7705 4.34783 0 3.37328 3.93013 2.36613 0 0.455433 10.6842 14.6885 c 0 0 0 0 36.7869 7.37986 2.98982 27.2526 95.1341 2.67746 96.764 99.2193 80.2632 32.6557 g 0 0 0 0 25.9016 87.2426 0 67.6875 0 0 0 0.325309 2.78947 20.9836 t 0 0 0 0 7.54098 1.02975 97.0102 1.68664 0.935745 94.9564 3.23604 0 6.26316 31.6721

M04387_2.00_rc_shift2 (ZNF263_rc)
; positions_7nt_m4 versus M04387_2.00_rc (ZNF263_rc); m=2/25; ncol2=10; w=0; offset=0; strand=R; shift=2; score=0.600109; --rGGGAGsACs-- ; cor=; Ncor= a 0 0 31.8725 8.33674 1.97198 0 92.5711 2.11752 1.07362 94.2091 1.97505 7.11845 0 0 c 0 0 13.0336 2.86065 2.02387 2.31916 0 2.17046 67.3696 0 91.3202 25.8542 0 0 g 0 0 34.5475 71.8022 91.178 97.0182 5.79557 93.0122 28.9494 5.79088 3.69023 45.1025 0 0 t 0 0 20.5464 17.0004 4.82615 0.662617 1.6333 2.69984 2.60736 0 3.01455 21.9248 0 0

M07771_2.00_shift0 (ZNF674)
; positions_7nt_m4 versus M07771_2.00 (ZNF674); m=3/25; ncol2=12; w=-2; offset=-2; strand=D; shift=0; score=0.563004; yybTGGyGCyCC-- ; cor=; Ncor= a 12.199 5.87798 2.36354 0.110765 13.5452 0.110765 0.554338 0.110765 13.8641 5.53264 0.554338 0.110765 0 0 c 35.2387 29.5329 35.6007 24.7289 0.110765 0.110765 34.2515 0.110765 68.6299 37.9346 97.4519 99.6677 0 0 g 22.7491 10.3032 31.247 0.110765 82.2454 86.8 15.4207 98.3184 12.9648 0.110765 0.110765 0.110765 0 0 t 29.8132 54.286 30.7888 75.0495 4.09859 12.9784 49.7735 1.46003 4.54126 56.4219 1.88301 0.110765 0 0

M07732_2.00_shift3 (ZNF790)
; positions_7nt_m4 versus M07732_2.00 (ZNF790); m=4/25; ncol2=8; w=0; offset=1; strand=D; shift=3; score=0.551032; ---TGCTGCAC--- ; cor=; Ncor= a 0 0 0 0 2.7027 0 0 0 0 91.8919 0 0 0 0 c 0 0 0 2.7027 0 81.0811 0 0 100 0 100 0 0 0 g 0 0 0 16.2162 97.2973 18.9189 0 100 0 8.1081 0 0 0 0 t 0 0 0 81.0811 0 0 100 0 0 0 0 0 0 0

M00336_2.00_rc_shift3 (PAX6_rc)
; positions_7nt_m4 versus M00336_2.00_rc (PAX6_rc); m=5/25; ncol2=8; w=0; offset=1; strand=R; shift=3; score=0.541251; ---GTGTGCAY--- ; cor=; Ncor= a 0 0 0 22.2345 6.71543 0.0664894 0.0664894 0.0664894 0.0664894 99.8005 0.0766871 0 0 0 c 0 0 0 0.110619 0.0664894 0.0664894 6.71543 0.0664894 99.8005 0.0664894 69.0951 0 0 0 g 0 0 0 77.5442 13.3644 99.8005 0.0664894 99.8005 0.0664894 0.0664894 0.0766871 0 0 0 t 0 0 0 0.110619 79.8537 0.0664894 93.1516 0.0664894 0.0664894 0.0664894 30.7515 0 0 0

M00766_2.00_rc_shift3 (M00766_2.00_rc)
; positions_7nt_m4 versus M00766_2.00_rc; m=6/25; ncol2=8; w=0; offset=1; strand=R; shift=3; score=0.495915; ---gGGAGsAC--- ; cor=; Ncor= a 0 0 0 15 3.84615 3.57143 89.2857 3.57143 3.57143 89.2857 4.54545 0 0 0 c 0 0 0 15 3.84615 3.57143 3.57143 3.57143 53.5714 3.57143 81.8182 0 0 0 g 0 0 0 60 80.7692 89.2857 3.57143 71.4286 39.2857 3.57143 9.09091 0 0 0 t 0 0 0 10 11.5385 3.57143 3.57143 21.4286 3.57143 3.57143 4.54545 0 0 0

M00142_2.00_rc_shift3 (ZNF691_rc)
; positions_7nt_m4 versus M00142_2.00_rc (ZNF691_rc); m=7/25; ncol2=8; w=0; offset=1; strand=R; shift=3; score=0.479875; ---rkGAGyAC--- ; cor=; Ncor= a 0 0 0 51.6489 8.14737 1.89551 97.1426 0.952471 0 79.1865 5.49014 0 0 0 c 0 0 0 10.01 12.7964 0.0094304 0.952471 0.0094304 64.7468 18.8143 89.006 0 0 0 g 0 0 0 28.3311 52.3129 98.0856 1.89551 97.1426 0.961538 0.00989707 1.3828 0 0 0 t 0 0 0 10.01 26.7434 0.0094304 0.0094304 1.89551 34.2822 1.98931 4.12103 0 0 0

M04392_2.00_rc_shift0 (SNAI2_rc)
; positions_7nt_m4 versus M04392_2.00_rc (SNAI2_rc); m=8/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.475413; rrCAGGTGCA---- ; cor=; Ncor= a 42.7063 62.5998 0 100 0 0.190442 0.023777 0 0 68.0061 0 0 0 0 c 8.96947 0 100 0 0 0 0.0772752 0 79.4015 3.94167 0 0 0 0 g 35.8361 32.3761 0 0 100 99.7917 0.225881 100 0 23.9186 0 0 0 0 t 12.4881 5.02407 0 0 0 0.017854 99.6731 0 20.5985 4.13355 0 0 0 0

M08775_2.00_shift6 (M08775_2.00)
; positions_7nt_m4 versus M08775_2.00; m=9/25; ncol2=9; w=0; offset=4; strand=D; shift=6; score=0.47529; ------yrCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 19.9921 31.573 0 99.884 0 0 0 0 c 0 0 0 0 0 0 34.674 0 100 0.11602 100 100 0 0 g 0 0 0 0 0 0 8.0382 65.935 0 0 0 0 0 100 t 0 0 0 0 0 0 37.2957 2.49199 0 0 0 0 100 0

M04443_2.00_rc_shift0 (SNAI1_rc)
; positions_7nt_m4 versus M04443_2.00_rc (SNAI1_rc); m=10/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.47274; arCAGGTGcA---- ; cor=; Ncor= a 47.7129 45.2762 1.84936 97.7416 1.39111 0.0937427 0.526617 0.98711 2.46875 68.6642 0 0 0 0 c 13.0307 0.617352 95.5615 0 0.866591 0 0 0 66.6094 6.36336 0 0 0 0 g 24.1379 48.7267 1.73728 1.45592 97.2178 99.9063 1.86606 99.0129 8.21094 16.7752 0 0 0 0 t 15.1185 5.37978 0.851827 0.802476 0.524515 0 97.6073 0 22.7109 8.19721 0 0 0 0

M04394_2.00_rc_shift0 (SNAI2_rc)
; positions_7nt_m4 versus M04394_2.00_rc (SNAI2_rc); m=11/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.46398; rrCAGGTGCa---- ; cor=; Ncor= a 41.7209 61.9346 0 99.9118 1.92227 0 0 0.413835 2.72069 60.9233 0 0 0 0 c 10.748 0.435455 100 0.0579491 0 0.0126072 0 0.0376213 68.1978 7.1332 0 0 0 0 g 34.9952 32.4259 0 0 97.9789 99.9874 0.0378119 99.4583 8.03481 24.5091 0 0 0 0 t 12.5359 5.20405 0 0.0302343 0.0988313 0 99.9622 0.0902912 21.0467 7.43432 0 0 0 0

M04607_2.00_shift6 (SNAI3)
; positions_7nt_m4 versus M04607_2.00 (SNAI3); m=12/25; ncol2=10; w=0; offset=4; strand=D; shift=6; score= 0.4531; ------trCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 7.38318 27.3869 0.47081 99.3639 0 0.667909 0.0477327 0.555027 c 0 0 0 0 0 0 20.9479 14.7375 98.054 0.445293 99.7127 97.0488 0.540971 0 g 0 0 0 0 0 0 9.18558 54.1327 0 0.19084 0.287265 0.45045 0 99.0802 t 0 0 0 0 0 0 62.4833 3.74285 1.4752 0 0 1.83287 99.4113 0.364732

M08973_2.00_shift5 (M08973_2.00)
; positions_7nt_m4 versus M08973_2.00; m=13/25; ncol2=11; w=0; offset=3; strand=D; shift=5; score=0.452543; -----mtgCACCTG ; cor=; Ncor= a 0 0 0 0 0 36.4372 19.6356 21.4575 0.404858 99.7976 0 0 0 0.202429 c 0 0 0 0 0 30.5668 20.8502 15.3846 99.5951 0 99.7976 99.7976 0 0 g 0 0 0 0 0 21.6599 23.8866 60.5263 0 0 0 0 0 99.7976 t 0 0 0 0 0 11.336 35.6275 2.63158 0 0.202429 0.202429 0.202429 100 0

M04393_2.00_rc_shift0 (SNAI2_rc)
; positions_7nt_m4 versus M04393_2.00_rc (SNAI2_rc); m=14/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.452461; rrCAGGTGcr---- ; cor=; Ncor= a 37.8363 53.9334 0 100 1.10288 0 0 0 2.69082 48.6089 0 0 0 0 c 13.0222 0.117782 100 0 0 0 0 0 65.6645 9.09527 0 0 0 0 g 32.4109 38.912 0 0 98.8971 100 0.0501283 100 7.14839 32.754 0 0 0 0 t 16.7306 7.03681 0 0 0 0 99.9499 0 24.4963 9.54176 0 0 0 0

M02728_2.00_rc_shift2 (TCF4_rc)
; positions_7nt_m4 versus M02728_2.00_rc (TCF4_rc); m=15/25; ncol2=7; w=0; offset=0; strand=R; shift=2; score=0.447703; --CAGGTGy----- ; cor=; Ncor= a 0 0 0.647821 98.3422 0.0574053 2.40128 0.2936 0.298507 2.85714 0 0 0 0 0 c 0 0 97.821 0.236827 3.90356 8.96478 0.998238 0 47.9365 0 0 0 0 0 g 0 0 0.294464 0.769686 95.3502 88.6339 1.1744 99.1642 9.66811 0 0 0 0 0 t 0 0 1.23675 0.651273 0.688863 0 97.5338 0.537313 39.5382 0 0 0 0 0

M04444_2.00_shift6 (SNAI1)
; positions_7nt_m4 versus M04444_2.00 (SNAI1); m=16/25; ncol2=10; w=0; offset=4; strand=D; shift=6; score=0.446918; ------yGCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 5.98876 19.479 0.134373 100 0 0.0322103 0.0460193 0.00657505 c 0 0 0 0 0 0 46.6276 9.42949 99.6592 0 100 97.945 0 0.0263002 g 0 0 0 0 0 0 4.56805 69.3091 0 0 0 0.0805257 0 99.9671 t 0 0 0 0 0 0 42.8155 1.78242 0.206476 0 0 1.94228 99.954 0

M04608_2.00_rc_shift0 (SNAI3_rc)
; positions_7nt_m4 versus M04608_2.00_rc (SNAI3_rc); m=17/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.444579; rrCAGGTGyr---- ; cor=; Ncor= a 43.1493 55.3369 0.806723 99.8979 2.20903 0.102145 0.168124 1.9385 2.8208 54.0541 0 0 0 0 c 12.0654 0.333556 98.6218 0 1.05506 0 0 0 54.0929 5.86092 0 0 0 0 g 28.8344 42.5284 0.571429 0 96.7359 99.8979 1.17687 98.0615 17.1091 35.044 0 0 0 0 t 15.9509 1.8012 0 0.102145 0 0 98.655 0 25.9771 5.041 0 0 0 0

M04442_2.00_shift6 (SNAI1)
; positions_7nt_m4 versus M04442_2.00 (SNAI1); m=18/25; ncol2=10; w=0; offset=4; strand=D; shift=6; score=0.438068; ------yrCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 13.8336 26.2356 0 100 0 0 0 0 c 0 0 0 0 0 0 35.0855 11.9189 100 0 100 99.5913 0 0 g 0 0 0 0 0 0 13.6551 59.4683 0 0 0 0 0 100 t 0 0 0 0 0 0 37.4258 2.37716 0 0 0 0.408703 100 0

M08853_2.00_rc_shift0 (SNAI2_rc)
; positions_7nt_m4 versus M08853_2.00_rc (SNAI2_rc); m=19/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.437035; rrCAGGTGca---- ; cor=; Ncor= a 40 43 0.2 100 0 0 0 0 0.4 37.4 0 0 0 0 c 7.2 0.4 99.8 0 0 0 0 0 56.2 23.2 0 0 0 0 g 42.6 56.4 0 0 100 100 0 99.4 21 18.8 0 0 0 0 t 10.2 0.2 0 0 0 0 100 0.6 22.4 20.6 0 0 0 0

M04395_2.00_rc_shift0 (SNAI2_rc)
; positions_7nt_m4 versus M04395_2.00_rc (SNAI2_rc); m=20/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.433513; rrCAGGTGcr---- ; cor=; Ncor= a 34.6441 46.5531 0 100 3.56037 0 0 0.512821 3.74194 37.6205 0 0 0 0 c 13.6662 0.264692 100 0 0 0 0 0 59.0645 7.87723 0 0 0 0 g 34.93 46.0207 0 0 96.3684 100 0 99.1464 13.0474 45.5218 0 0 0 0 t 16.7598 7.16155 0 0 0.0712074 0 100 0.340819 24.1461 8.98042 0 0 0 0

M10091_2.00_shift5 (ZEB1)
; positions_7nt_m4 versus M10091_2.00 (ZEB1); m=21/25; ncol2=12; w=0; offset=3; strand=D; shift=5; score=0.425348; -----vyrCACCTG ; cor=; Ncor= a 0 0 0 0 0 25 8.33333 41.6667 0 100 0 0 0 0 c 0 0 0 0 0 41.6667 33.3333 0 100 0 91.6667 91.6667 0 0 g 0 0 0 0 0 33.3333 16.6667 58.3333 0 0 0 8.33333 0 100 t 0 0 0 0 0 0 41.6667 0 0 0 8.33333 0 100 0

M04441_2.00_rc_shift0 (SNAI1_rc)
; positions_7nt_m4 versus M04441_2.00_rc (SNAI1_rc); m=22/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.413973; drCAGGTGyr---- ; cor=; Ncor= a 26.3924 29.1363 2.11947 95.4341 7.8242 0.358441 0.189413 3.36206 6.08683 32.6156 0 0 0 0 c 15.9486 2.08741 94.9579 1.41847 2.29055 0.0248917 0 0 40.6209 14.8464 0 0 0 0 g 32.0773 54.1186 1.30685 0.434616 88.5295 99.4773 0.209351 95.1569 19.7051 31.9884 0 0 0 0 t 25.5817 14.6577 1.61574 2.71277 1.35572 0.139394 99.6012 1.48102 33.5871 20.5496 0 0 0 0

M02807_2.00_rc_shift0 (TCF4_rc)
; positions_7nt_m4 versus M02807_2.00_rc (TCF4_rc); m=23/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.404063; wvCAGGTGyr---- ; cor=; Ncor= a 26.4568 30.986 0.122597 99.4279 0 5.56204 0 0.0638695 2.01121 25.4979 0 0 0 0 c 23.7915 31.0991 99.7205 0 1.86255 9.65227 0 0 47.4036 10.4647 0 0 0 0 g 23.6636 36.0757 0.0245194 0 97.8679 84.7857 0 99.9067 12.1214 40.7376 0 0 0 0 t 26.088 1.83919 0.132405 0.572071 0.269516 0 100 0.0294782 38.4638 23.2997 0 0 0 0

M02808_2.00_rc_shift0 (TCF4_rc)
; positions_7nt_m4 versus M02808_2.00_rc (TCF4_rc); m=24/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.403261; wrcAGGTGyd---- ; cor=; Ncor= a 27.2727 31.5047 14.9671 91.7986 7.80488 7.16216 18.5185 0 8.6478 25.5887 0 0 0 0 c 22.5705 24.7649 52.4671 0 4.7561 6.62162 0.83632 5.83215 31.4465 12.7159 0 0 0 0 g 19.279 33.3856 24.2599 8.20144 77.8049 86.2162 4.42055 90.7539 19.1824 33.124 0 0 0 0 t 30.8777 10.3448 8.30592 0 9.63415 0 76.2246 3.41394 40.7233 28.5714 0 0 0 0

M02794_2.00_shift6 (MESP1)
; positions_7nt_m4 versus M02794_2.00 (MESP1); m=25/25; ncol2=10; w=0; offset=4; strand=D; shift=6; score=0.401311; ------hrCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 40.2098 47.0383 0 88.5802 0 2.40964 0 0 c 0 0 0 0 0 0 25.5245 19.1638 100 11.4198 86.4458 86.4458 11.1455 9.28144 g 0 0 0 0 0 0 4.8951 31.7073 0 0 9.33735 4.51807 0 85.9281 t 0 0 0 0 0 0 29.3706 2.09059 0 0 4.21687 6.62651 88.8545 4.79042

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_7nt_mkv5_m5_shift3 (oligos_7nt_mkv5_m5)				; oligos_7nt_mkv5_m5; m=0 (reference); ncol1=12; shift=3; ncol=15; ---ssCGCCTGCGss ; Alignment reference a 0 0 0 1597 1425 401 287 157 261 363 104 262 374 1481 1652 c 0 0 0 4045 4144 9963 544 10297 10359 1094 790 9872 787 4537 4102 g 0 0 0 3786 4240 639 10070 699 589 646 10269 928 9719 3632 3885 t 0 0 0 1922 1541 347 449 197 141 9247 187 288 470 1700 1711
M08177_2.00_shift4 (NRF1)				; oligos_7nt_mkv5_m5 versus M08177_2.00 (NRF1); m=1/31; ncol2=11; w=0; offset=1; strand=D; shift=4; score=0.792067; ----GCGCmTGCGCr ; cor=; Ncor= a 0 0 0 0 13.019 13.4732 4.23875 0 32.7422 0 0 0 0 1.60035 48.551 c 0 0 0 0 8.10986 86.5268 4.08737 86.8512 40.2682 8.7154 0 93.8149 7.54758 98.3997 17.3875 g 0 0 0 0 78.8711 0 91.6739 10.1211 20.2206 11.4187 100 0 92.4524 0 34.0614 t 0 0 0 0 0 0 0 3.02768 6.76903 79.8659 0 6.18512 0 0 0
M03580_2.00_rc_shift3 (NRF1_rc)				; oligos_7nt_mkv5_m5 versus M03580_2.00_rc (NRF1_rc); m=2/31; ncol2=12; w=0; offset=0; strand=R; shift=3; score=0.758947; ---tGCGCATGCGYr ; cor=; Ncor= a 0 0 0 20.7347 18.7286 2.17835 1.66205 0.070497 93.7728 0.676133 0.0352983 0.137979 0.0695169 0 62.3533 c 0 0 0 15.7542 0.342075 96.3581 0.138504 99.7885 1.52368 2.16362 0 97.6544 0.312826 74.0324 0.89717 g 0 0 0 17.5556 80.7013 1.36147 98.0263 0.140994 4.00795 1.45368 99.9294 0.172473 98.4011 0.156904 35.3347 t 0 0 0 45.9555 0.22805 0.10211 0.17313 0 0.695595 95.7066 0.0352983 2.03518 1.21655 25.8107 1.41477
M04574_2.00_rc_shift2 (ZNF454_rc)				; oligos_7nt_mkv5_m5 versus M04574_2.00_rc (ZNF454_rc); m=3/31; ncol2=14; w=-1; offset=-1; strand=R; shift=2; score=0.676226; --wrGCGCCGGCGCy ; cor=; Ncor= a 0 0 29.3251 39.8857 17.9036 1.28913 0.265745 0.0534045 1.75026 1.22396 0.213789 0.0534045 0.924703 0.571429 1.58359 c 0 0 16.1489 2.16203 0.607639 98.211 0.239171 99.6796 97.5183 0.0520833 0 99.6796 0.184941 82.044 56.594 g 0 0 20.0589 52.8827 81.0113 0.131544 99.2028 0.133511 0.0261233 97.2135 99.7595 0.186916 98.6262 0.747253 1.50571 t 0 0 34.4671 5.06958 0.477431 0.368324 0.29232 0.133511 0.705329 1.51042 0.0267237 0.0801068 0.264201 16.6374 40.3167
M04572_2.00_shift2 (ZNF454)				; oligos_7nt_mkv5_m5 versus M04572_2.00 (ZNF454); m=4/31; ncol2=14; w=-1; offset=-1; strand=D; shift=2; score=0.669572; --TrGCGCCGGCGCy ; cor=; Ncor= a 0 0 11.0982 37.4973 11.7952 0.235243 0 0 0 0.137024 0.0438813 0.0877482 0.0491079 0 2.42546 c 0 0 4.19829 0.385618 0.0338803 99.6608 0.0603467 99.9945 99.9232 0.0164429 0.032911 99.9068 0.0873029 87.7378 65.4292 g 0 0 6.58262 61.4436 88.171 0.0711199 99.9397 0.00548908 0.032911 99.8465 99.9232 0.00548426 99.3998 0.414198 1.09622 t 0 0 78.1208 0.673474 0 0.0328246 0 0 0.0438813 0 0 0 0.463797 11.848 31.0491
M09655_2.00_rc_shift2 (NRF1_rc)				; oligos_7nt_mkv5_m5 versus M09655_2.00_rc (NRF1_rc); m=5/31; ncol2=12; w=-1; offset=-1; strand=R; shift=2; score=0.664847; --ctGCGCATGCGC- ; cor=; Ncor= a 0 0 7.8 5.2 3.6 4 1.7 0.5 73.4 4.1 0.5 1.1 0.8 0.6 0 c 0 0 62.8 17 0.6 93.6 0.4 98.3 16.8 7.7 1.3 95.9 2 92.8 0 g 0 0 19.7 10.6 95.5 1.8 97.6 0.7 6.8 16.7 97.5 0.4 92.2 0.9 0 t 0 0 9.8 67.3 0.3 0.6 0.3 0.6 3.1 71.5 0.7 2.6 5 5.7 0
M08080_2.00_shift3 (ZEB1)				; oligos_7nt_mkv5_m5 versus M08080_2.00 (ZEB1); m=6/31; ncol2=11; w=0; offset=0; strand=D; shift=3; score=0.662006; ---ssCACCTGsss- ; cor=; Ncor= a 0 0 0 15.9521 23.2749 0.566347 98.8872 0.158975 0.958816 0.0198718 2.19087 9.84649 21.1536 17.3382 0 c 0 0 0 39.7337 27.5722 95.3599 0 98.753 95.6679 2.48895 0.884296 47.4986 30.389 34.5521 0 g 0 0 0 25.9725 25.729 0.784937 1.10785 0.481892 3.2242 1.76362 96.284 25.7241 32.7935 28.9533 0 t 0 0 0 18.3417 23.4239 3.28879 0 0.606091 0.149039 95.7276 0.640866 16.9308 15.664 19.1564 0
M05963_2.00_shift5 (M05963_2.00)				; oligos_7nt_mkv5_m5 versus M05963_2.00; m=7/31; ncol2=10; w=0; offset=2; strand=D; shift=5; score=0.595244; -----CACCTGmdCC ; cor=; Ncor= a 0 0 0 0 0 0 100 0 0 0 0 33.3333 25 8.33333 9.09091 c 0 0 0 0 0 100 0 100 100 0 0 66.6667 8.33333 83.3333 72.7273 g 0 0 0 0 0 0 0 0 0 0 100 0 33.3333 0 9.09091 t 0 0 0 0 0 0 0 0 0 100 0 0 33.3333 8.33333 9.09091
M08284_2.00_shift2 (ZNF213)				; oligos_7nt_mkv5_m5 versus M08284_2.00 (ZNF213); m=8/31; ncol2=15; w=-1; offset=-1; strand=D; shift=2; score=0.562575; --CgCCGCCygmkkT ; cor=; Ncor= a 0 0 0.868726 0.0965251 2.41313 13.2239 1.25483 2.41313 0.0965251 1.25483 12.8378 39.8649 0.868726 0.0965251 0.0965251 c 0 0 91.9884 11.2934 76.5444 68.8224 0.0965251 93.5328 99.3243 36.39 12.0656 32.529 12.4517 2.41313 4.72973 g 0 0 1.25483 66.8919 16.6988 3.95753 96.2355 3.57143 0.0965251 4.72973 66.8919 22.8764 50.6757 32.9151 0.482625 t 0 0 5.88803 21.7181 4.34363 13.9961 2.41313 0.482625 0.482625 57.6255 8.20463 4.72973 36.0039 64.5753 94.6911
M09751_2.00_shift6 (TFAP2C,TFAP2D)				; oligos_7nt_mkv5_m5 versus M09751_2.00 (TFAP2C,TFAP2D); m=9/31; ncol2=9; w=0; offset=3; strand=D; shift=6; score=0.557429; ------GCCysrgGs ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 2.73973 9.58904 31.5068 19.1781 8.21918 7.53425 c 0 0 0 0 0 0 0 100 100 44.5205 31.5068 23.9726 8.90411 6.16438 38.3562 g 0 0 0 0 0 0 100 0 0 21.2329 39.726 39.0411 63.6986 79.4521 43.1507 t 0 0 0 0 0 0 0 0 0 31.5068 19.1781 5.47945 8.21918 6.16438 10.9589
M09443_2.00_shift1 (NRF1)				; oligos_7nt_mkv5_m5 versus M09443_2.00 (NRF1); m=10/31; ncol2=17; w=-2; offset=-2; strand=D; shift=1; score=0.544426; -syyGCGCATGCGCA ; cor=; Ncor= a 0 6.8 20.2 6.4 17.8 9.2 7 0.6 72 3.2 0.4 0.2 0 0 79.8 c 0 52.2 37.8 31.6 1.4 86.6 0.2 97.6 16.4 4.8 0.2 98.8 0.4 90.8 4.6 g 0 29.6 14 19.4 80 4.2 91.4 1 7.6 13.8 99.2 0 96.8 0.2 10 t 0 11.4 28 42.6 0.8 0 1.4 0.8 4 78.2 0.2 1 2.8 9 5.6
M09755_2.00_shift6 (TFAP2A,TFAP2D)				; oligos_7nt_mkv5_m5 versus M09755_2.00 (TFAP2A,TFAP2D); m=11/31; ncol2=9; w=0; offset=3; strand=D; shift=6; score=0.529655; ------GCCcbrrGs ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 11.8919 10.2703 29.7297 28.6486 10.2703 4.86486 c 0 0 0 0 0 0 0 100 100 38.3784 30.8108 23.7838 16.2162 8.64865 42.1622 g 0 0 0 0 0 0 100 0 0 24.8649 32.973 36.2162 49.1892 74.0541 42.7027 t 0 0 0 0 0 0 0 0 0 24.8649 25.9459 10.2703 5.94595 7.02703 10.2703
M08701_2.00_shift6 (TFAP2B,TFAP2D)				; oligos_7nt_mkv5_m5 versus M08701_2.00 (TFAP2B,TFAP2D); m=12/31; ncol2=10; w=0; offset=3; strand=D; shift=6; score=0.508802; ------GcCyGvGGg ; cor=; Ncor= a 0 0 0 0 0 0 3.95257 0 0 11.4625 7.50988 32.8063 7.11462 0 19.0711 c 0 0 0 0 0 0 0 64.8221 96.4427 57.3123 3.55731 31.6206 3.55731 0 12.3518 g 0 0 0 0 0 0 78.2609 24.5059 0 0 88.9328 35.5731 85.3755 100 67.6877 t 0 0 0 0 0 0 17.7866 10.6719 3.55731 31.2253 0 0 3.95257 0 0.889328
M08705_2.00_shift6 (TFAP2D)				; oligos_7nt_mkv5_m5 versus M08705_2.00 (TFAP2D); m=13/31; ncol2=10; w=0; offset=3; strand=D; shift=6; score=0.508802; ------GcCyGvGGg ; cor=; Ncor= a 0 0 0 0 0 0 3.95257 0 0 11.4625 7.50988 32.8063 7.11462 0 19.0711 c 0 0 0 0 0 0 0 64.8221 96.4427 57.3123 3.55731 31.6206 3.55731 0 12.3518 g 0 0 0 0 0 0 78.2609 24.5059 0 0 88.9328 35.5731 85.3755 100 67.6877 t 0 0 0 0 0 0 17.7866 10.6719 3.55731 31.2253 0 0 3.95257 0 0.889328
M04214_2.00_shift4 (TCF4)				; oligos_7nt_mkv5_m5 versus M04214_2.00 (TCF4); m=14/31; ncol2=8; w=0; offset=1; strand=D; shift=4; score=0.495741; ----vCACCTGc--- ; cor=; Ncor= a 0 0 0 0 29.154 0 100 0 0.934488 0 0 9.01677 0 0 0 c 0 0 0 0 27.7783 100 0 91.5555 81.8618 0 0 52.9805 0 0 0 g 0 0 0 0 34.7188 0 0 2.55795 17.2037 0 100 13.9395 0 0 0 t 0 0 0 0 8.34889 0 0 5.88659 0 100 0 24.0633 0 0 0
M02541_2.00_shift7 (M02541_2.00)				; oligos_7nt_mkv5_m5 versus M02541_2.00; m=15/31; ncol2=8; w=0; offset=4; strand=D; shift=7; score=0.483533; -------CCCGCGGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 c 0 0 0 0 0 0 0 97.1154 97.1154 97.1154 0.961538 97.1154 0.961538 0.961538 0.961538 g 0 0 0 0 0 0 0 0.961538 0.961538 0.961538 97.1154 0.961538 97.1154 97.1154 97.1154 t 0 0 0 0 0 0 0 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538
M07842_2.00_shift3 (ZEB1)				; oligos_7nt_mkv5_m5 versus M07842_2.00 (ZEB1); m=16/31; ncol2=8; w=0; offset=0; strand=D; shift=3; score=0.481572; ---ctCACCTG---- ; cor=; Ncor= a 0 0 0 2.6608 21.5078 0 100 0 0 0 0 0 0 0 0 c 0 0 0 67.4057 14.6341 79.6009 0 100 100 0 0 0 0 0 0 g 0 0 0 11.7517 18.847 0 0 0 0 0 97.7827 0 0 0 0 t 0 0 0 18.1818 45.0111 20.3991 0 0 0 100 2.2173 0 0 0 0
M04215_2.00_shift4 (TCF4)				; oligos_7nt_mkv5_m5 versus M04215_2.00 (TCF4); m=17/31; ncol2=8; w=0; offset=1; strand=D; shift=4; score=0.479546; ----rCACCTGy--- ; cor=; Ncor= a 0 0 0 0 30.0915 0 100 0 5.10355 0 0 13.383 0 0 0 c 0 0 0 0 23.7516 100 0 73.952 93.1711 0 0 42.5557 0 0 0 g 0 0 0 0 35.0603 0 0 7.7096 1.72533 0 100 18.4861 0 0 0 t 0 0 0 0 11.0966 0 0 18.3384 0 100 0 25.5751 0 0 0
M09002_2.00_shift4 (M09002_2.00)				; oligos_7nt_mkv5_m5 versus M09002_2.00; m=18/31; ncol2=8; w=0; offset=1; strand=D; shift=4; score=0.475249; ----mCACCTGs--- ; cor=; Ncor= a 0 0 0 0 26.7857 0 100 0 0 0 0 5.35714 0 0 0 c 0 0 0 0 48.2143 100 0 100 100 0 0 26.7857 0 0 0 g 0 0 0 0 19.6429 0 0 0 0 0 100 48.2143 0 0 0 t 0 0 0 0 5.35714 0 0 0 0 100 0 19.6429 0 0 0
M08886_2.00_shift4 (SNAI1)				; oligos_7nt_mkv5_m5 versus M08886_2.00 (SNAI1); m=19/31; ncol2=8; w=0; offset=1; strand=D; shift=4; score=0.475249; ----mCACCTGs--- ; cor=; Ncor= a 0 0 0 0 26.7857 0 100 0 0 0 0 5.35714 0 0 0 c 0 0 0 0 48.2143 100 0 100 100 0 0 26.7857 0 0 0 g 0 0 0 0 19.6429 0 0 0 0 0 100 48.2143 0 0 0 t 0 0 0 0 5.35714 0 0 0 0 100 0 19.6429 0 0 0
M04138_2.00_shift4 (TCF12)				; oligos_7nt_mkv5_m5 versus M04138_2.00 (TCF12); m=20/31; ncol2=8; w=0; offset=1; strand=D; shift=4; score=0.471725; ----rCAYCTGc--- ; cor=; Ncor= a 0 0 0 0 32.2515 0 100 0 10.2248 0 0 14.8553 0 0 0 c 0 0 0 0 21.365 100 0 69.2663 85.2456 0 0 46.9028 0 0 0 g 0 0 0 0 29.7478 0 0 5.17795 4.52956 0 96.4746 14.6699 0 0 0 t 0 0 0 0 16.6358 0 0 25.5557 0 100 3.52541 23.572 0 0 0
M04137_2.00_shift4 (TCF12)				; oligos_7nt_mkv5_m5 versus M04137_2.00 (TCF12); m=21/31; ncol2=8; w=0; offset=1; strand=D; shift=4; score=0.469405; ----vCACsTGc--- ; cor=; Ncor= a 0 0 0 0 29.7668 0 100 0 4.49454 0 0 11.7992 0 0 0 c 0 0 0 0 25.5185 100 0 79.0301 62.6366 0 0 51.5589 0 0 0 g 0 0 0 0 33.4859 0 0 6.04793 32.8689 0 97.7352 14.1447 0 0 0 t 0 0 0 0 11.2287 0 0 14.922 0 100 2.26478 22.4971 0 0 0
M09017_2.00_rc_shift0 (ZFY_rc)				; oligos_7nt_mkv5_m5 versus M09017_2.00_rc (ZFY_rc); m=22/31; ncol2=19; w=-3; offset=-3; strand=R; shift=0; score=0.461709; gsCsvGGCCTgsgss ; cor=; Ncor= a 22.5735 2.17378 1.28652 6.4326 38.8206 2.48432 0 0 0 0.177451 14.6397 17.7926 14.6841 16.7723 9.71545 c 12.3225 49.7307 77.863 29.9924 26.6177 8.83133 0.532353 99.8225 99.2902 0.177451 19.9633 33.9819 23.5566 34.0263 51.334 g 52.4265 34.2512 0.754167 40.9944 32.6098 88.5069 99.4676 0.177451 0.354902 0.354902 58.2103 39.2642 47.0752 37.3566 27.9929 t 12.6775 13.8443 20.0963 22.5807 1.95196 0.177451 0 0 0.354902 99.2902 7.18677 8.96128 14.6841 11.8449 10.9576
M02728_2.00_shift4 (TCF4)				; oligos_7nt_mkv5_m5 versus M02728_2.00 (TCF4); m=23/31; ncol2=7; w=0; offset=1; strand=D; shift=4; score= 0.4378; ----rCACCTG---- ; cor=; Ncor= a 0 0 0 0 39.5382 0.537313 97.5338 0 0.688863 0.651273 1.23675 0 0 0 0 c 0 0 0 0 9.66811 99.1642 1.1744 88.6339 95.3502 0.769686 0.294464 0 0 0 0 g 0 0 0 0 47.9365 0 0.998238 8.96478 3.90356 0.236827 97.821 0 0 0 0 t 0 0 0 0 2.85714 0.298507 0.2936 2.40128 0.0574053 98.3422 0.647821 0 0 0 0
M01965_2.00_rc_shift2 (M01965_2.00_rc)				; oligos_7nt_mkv5_m5 versus M01965_2.00_rc; m=24/31; ncol2=9; w=-1; offset=-1; strand=R; shift=2; score=0.437441; --rssCGCcmw---- ; cor=; Ncor= a 0 0 26.6951 17.0249 0.941705 0 1.40615 0 8.43249 41.9828 34.1094 0 0 0 0 c 0 0 23.9143 53.2328 33.1134 99.9041 0.00148976 86.4773 55.2624 27.3102 20.8963 0 0 0 0 g 0 0 36.3967 28.0692 64.7113 0.00126108 98.579 11.587 24.0971 13.2933 15.636 0 0 0 0 t 0 0 12.9939 1.67309 1.2336 0.0866577 0.0133113 1.93456 12.208 17.4137 29.3583 0 0 0 0
M09521_2.00_rc_shift1 (E2F1_rc)				; oligos_7nt_mkv5_m5 versus M09521_2.00_rc (E2F1_rc); m=25/31; ncol2=10; w=-2; offset=-2; strand=R; shift=1; score=0.432736; -TTCCCGCCwg---- ; cor=; Ncor= a 0 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 37.7 14.1 0 0 0 0 c 0 4.8 0.2 98.2 91.7 99.5 0.2 99.5 79 21 22.4 0 0 0 0 g 0 0.2 0.2 1.5 8 0.2 99.5 0.2 14.7 15.8 42.4 0 0 0 0 t 0 94.9 99.5 0.2 0.2 0.2 0.2 0.2 6.2 25.7 21.3 0 0 0 0
M08767_2.00_shift5 (M08767_2.00)				; oligos_7nt_mkv5_m5 versus M08767_2.00; m=26/31; ncol2=7; w=0; offset=2; strand=D; shift=5; score=0.415684; -----CAsCTGC--- ; cor=; Ncor= a 0 0 0 0 0 0 100 0 0 0 0 3.22581 0 0 0 c 0 0 0 0 0 100 0 43.5484 100 0 0 75.8065 0 0 0 g 0 0 0 0 0 0 0 56.4516 0 0 100 3.22581 0 0 0 t 0 0 0 0 0 0 0 0 0 100 0 17.7419 0 0 0
M08717_2.00_shift5 (MYF6)				; oligos_7nt_mkv5_m5 versus M08717_2.00 (MYF6); m=27/31; ncol2=7; w=0; offset=2; strand=D; shift=5; score=0.415684; -----CAsCTGC--- ; cor=; Ncor= a 0 0 0 0 0 0 100 0 0 0 0 3.22581 0 0 0 c 0 0 0 0 0 100 0 43.5484 100 0 0 75.8065 0 0 0 g 0 0 0 0 0 0 0 56.4516 0 0 100 3.22581 0 0 0 t 0 0 0 0 0 0 0 0 0 100 0 17.7419 0 0 0
M07721_2.00_shift8 (ZNF786)				; oligos_7nt_mkv5_m5 versus M07721_2.00 (ZNF786); m=28/31; ncol2=7; w=0; offset=5; strand=D; shift=8; score=0.412016; --------CTGKGrC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 37.5 0 c 0 0 0 0 0 0 0 0 100 0 0 0 0 0 100 g 0 0 0 0 0 0 0 0 0 0 100 75 100 50 0 t 0 0 0 0 0 0 0 0 0 100 0 25 0 12.5 0
M07757_2.00_shift8 (ZNF783)				; oligos_7nt_mkv5_m5 versus M07757_2.00 (ZNF783); m=29/31; ncol2=8; w=0; offset=5; strand=D; shift=8; score=0.409498; --------CsGCGkC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 100 46.7811 0 100 0 0 100 g 0 0 0 0 0 0 0 0 0 42.9185 100 0 100 50 0 t 0 0 0 0 0 0 0 0 0 10.3004 0 0 0 50 0
M01969_2.00_shift1 (M01969_2.00)				; oligos_7nt_mkv5_m5 versus M01969_2.00; m=30/31; ncol2=10; w=-2; offset=-2; strand=D; shift=1; score=0.406497; -hgsGCGCCaw---- ; cor=; Ncor= a 0 26.9059 22.8056 16.8238 0.0215789 0.0115045 0.0235632 0.0137924 3.58646 45.8029 42.0972 0 0 0 0 c 0 27.7253 11.1007 49.0477 6.84804 99.9812 0.00107217 95.2366 73.4912 13.9342 17.4612 0 0 0 0 g 0 7.18751 55.5345 32.2267 93.1269 0.00371633 99.6766 2.76313 12.148 15.8687 13.3295 0 0 0 0 t 0 38.1813 10.5593 1.90179 0 0 0.298774 1.98648 10.7743 24.3942 27.1121 0 0 0 0
M01967_2.00_rc_shift1 (M01967_2.00_rc)				; oligos_7nt_mkv5_m5 versus M01967_2.00_rc; m=31/31; ncol2=10; w=-2; offset=-2; strand=R; shift=1; score=0.403119; -wscsCGCsaw---- ; cor=; Ncor= a 0 34.7822 24.5367 22.145 0.623559 0 0.0420779 0 3.93797 41.5048 30.6595 0 0 0 0 c 0 17.2723 26.5803 52.858 60.2009 99.9657 0.0049014 83.1039 54.6344 20.8178 20.7583 0 0 0 0 g 0 22.1781 28.7941 23.9894 39.1613 0.000330411 99.6602 16.2825 31.8381 23.0073 18.2277 0 0 0 0 t 0 25.7673 20.0889 1.00764 0.0142313 0.0280106 0.292809 0.612682 9.58946 14.6701 30.3545 0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
positions_7nt_m2_shift4 (positions_7nt_m2)				; positions_7nt_m2; m=0 (reference); ncol1=12; shift=4; ncol=16; ----waTATATATAtw ; Alignment reference a 0 0 0 0 5022 8469 1770 14881 1412 15210 1453 15086 1281 14491 4068 7749 c 0 0 0 0 3357 2455 1876 777 1881 658 1753 691 2138 933 4078 2943 g 0 0 0 0 2940 4070 934 2131 697 1748 660 1880 779 1876 2453 3355 t 0 0 0 0 7751 4076 14490 1281 15080 1454 15204 1413 14872 1770 8471 5023
M00332_2.00_shift4 (HOXB7,HOXC5,HOXC6)				; positions_7nt_m2 versus M00332_2.00 (HOXB7,HOXC5,HOXC6); m=1/24; ncol2=10; w=0; offset=0; strand=D; shift=4; score=0.755701; ----atWATATAya-- ; cor=; Ncor= a 0 0 0 0 32.1579 19.9591 29.1262 99.917 9.90596 79.5937 10.4727 80.8041 11.9766 45.7153 0 0 c 0 0 0 0 22.614 10.1889 0.0276595 0.0276595 0.0276595 0.0276595 0.0276595 0.0276595 32.0521 14.8387 0 0 g 0 0 0 0 22.614 20.0672 0.0276595 0.0276595 0.0276595 0.0276595 0.0276595 9.57764 2.41363 14.8387 0 0 t 0 0 0 0 22.614 49.7848 70.8184 0.0276595 90.0387 20.351 89.472 9.59064 53.5576 24.6072 0 0
M00255_2.00_shift4 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1)				; positions_7nt_m2 versus M00255_2.00 (FOXC1,FOXD4,FOXD4L1,FOXD4L3,FOXD4L5,FOXD4L6,FOXI3,FOXP4,FOXS1); m=2/24; ncol2=12; w=0; offset=0; strand=D; shift=4; score=0.743584; ----wrTATATwatrc ; cor=; Ncor= a 0 0 0 0 31.2198 43.2921 5.14749 82.9897 0.0360027 80.6356 9.64692 48.0179 55.4481 22.2678 29.6103 22.5695 c 0 0 0 0 19.7177 12.49 5.14749 2.46645 9.79381 0.0360027 9.47987 0.0360027 14.9292 12.546 19.8885 32.2914 g 0 0 0 0 19.7177 31.728 5.14749 2.46645 9.66312 9.57816 0.0360027 0.0360027 5.31832 12.546 30.6126 22.5695 t 0 0 0 0 29.3448 12.49 84.5575 12.0774 80.5071 9.75025 80.8372 51.9101 24.3043 52.6401 19.8885 22.5695
M00786_2.00_rc_shift5 (M00786_2.00_rc)				; positions_7nt_m2 versus M00786_2.00_rc; m=3/24; ncol2=9; w=0; offset=1; strand=R; shift=5; score=0.72694; -----ayatayata-- ; cor=; Ncor= a 0 0 0 0 0 50 12.5 62.5 12.5 62.5 12.5 62.5 12.5 50 0 0 c 0 0 0 0 0 16.6667 25 12.5 12.5 12.5 25 12.5 12.5 16.6667 0 0 g 0 0 0 0 0 16.6667 12.5 12.5 12.5 12.5 12.5 12.5 12.5 16.6667 0 0 t 0 0 0 0 0 16.6667 50 12.5 62.5 12.5 50 12.5 62.5 16.6667 0 0
M00333_2.00_rc_shift5 (HOXB7,HOXC5,HOXC6_rc)				; positions_7nt_m2 versus M00333_2.00_rc (HOXB7,HOXC5,HOXC6_rc); m=4/24; ncol2=10; w=0; offset=1; strand=R; shift=5; score=0.689427; -----wAATATATat- ; cor=; Ncor= a 0 0 0 0 0 37.9552 82.165 80.3235 9.83457 79.4955 20.1694 99.915 0.0283262 57.2618 22.5353 0 c 0 0 0 0 0 17.3895 2.49306 0.0283262 0.0283262 0.0283262 9.88726 0.0283262 0.0283262 7.6388 22.5353 0 g 0 0 0 0 0 17.3895 2.49306 0.0283262 0.0283262 10.0921 0.0283262 0.0283262 0.0283262 17.4351 22.5353 0 t 0 0 0 0 0 27.2657 12.8488 19.6199 90.1088 10.3841 69.915 0.0283262 99.915 17.6643 32.3942 0
M00308_2.00_shift6 (HESX1,NKX1-1,NKX1-2,OTP,SEBOX)				; positions_7nt_m2 versus M00308_2.00 (HESX1,NKX1-1,NKX1-2,OTP,SEBOX); m=5/24; ncol2=9; w=0; offset=2; strand=D; shift=6; score=0.682615; ------yATAtATar- ; cor=; Ncor= a 0 0 0 0 0 0 14.4198 90.4175 9.52605 99.9154 19.4162 99.9154 9.52605 61.2864 29.1397 0 c 0 0 0 0 0 0 34.7792 0.0281994 18.3564 0.0281994 19.8662 0.0281994 9.46571 9.19273 20.6297 0 g 0 0 0 0 0 0 14.4198 9.52605 0.0281994 0.0281994 0.0281994 0.0281994 0.0281994 20.1259 29.2821 0 t 0 0 0 0 0 0 36.3812 0.0281994 72.0893 0.0281994 60.6894 0.0281994 80.98 9.39492 20.9486 0
M00304_2.00_shift4 (HOXC5,NANOGP8,NKX1-1,NKX1-2,VENTX)				; positions_7nt_m2 versus M00304_2.00 (HOXC5,NANOGP8,NKX1-1,NKX1-2,VENTX); m=6/24; ncol2=9; w=0; offset=0; strand=D; shift=4; score=0.676802; ----aATAYATAy--- ; cor=; Ncor= a 0 0 0 0 40.0565 89.4224 0.0269769 99.9191 0.0269769 80.0595 0.0269769 89.9711 5.04582 0 0 0 c 0 0 0 0 19.9812 0.0269769 19.5574 0.0269769 30.9856 0.0269769 0.0269769 0.0269769 33.7592 0 0 0 g 0 0 0 0 19.9812 10.5237 0.0269769 0.0269769 0.0269769 19.8865 0.0269769 9.97497 14.9938 0 0 0 t 0 0 0 0 19.9812 0.0269769 80.3886 0.0269769 68.9604 0.0269769 99.9191 0.0269769 46.2012 0 0 0
M01693_2.00_rc_shift5 (M01693_2.00_rc)				; positions_7nt_m2 versus M01693_2.00_rc; m=7/24; ncol2=10; w=0; offset=1; strand=R; shift=5; score= 0.6278; -----rtAWWTATwt- ; cor=; Ncor= a 0 0 0 0 0 30.2779 23.9593 90.6185 73.2217 70.8945 10.9675 76.7638 10.28 26.0727 10.0113 0 c 0 0 0 0 0 20.3034 15.0083 0.0196195 0.0196195 0.0196195 0.0196195 0.0196195 8.83145 4.7162 19.3339 0 g 0 0 0 0 0 29.1152 15.0083 9.34227 0.0196195 0.0196195 0.0196195 0.0196195 0.0196195 13.3577 10.0113 0 t 0 0 0 0 0 20.3034 46.0241 0.0196195 26.7391 29.0663 88.9933 23.1969 80.869 55.8535 60.6435 0
M01672_2.00_shift6 (M01672_2.00)				; positions_7nt_m2 versus M01672_2.00; m=8/24; ncol2=10; w=0; offset=2; strand=D; shift=6; score=0.603812; ------tAWWTAWWta ; cor=; Ncor= a 0 0 0 0 0 0 24.811 83.1954 29.2968 70.1933 0.0230425 80.2506 68.6996 29.7562 21.3125 32.2088 c 0 0 0 0 0 0 15.2843 2.42597 0.0230425 0.0230425 0.0230425 0.0230425 0.0230425 0.0230425 9.73873 22.5971 g 0 0 0 0 0 0 24.824 2.42597 0.0230425 0.0230425 0.0230425 0.0230425 0.0230425 0.0230425 9.73873 22.5971 t 0 0 0 0 0 0 35.0807 11.9527 70.6571 29.7606 99.9309 19.7033 31.2544 70.1978 59.21 22.5971
M00371_2.00_shift2 (NR2E3)				; positions_7nt_m2 versus M00371_2.00 (NR2E3); m=9/24; ncol2=13; w=-2; offset=-2; strand=D; shift=2; score=0.594005; --actyAATaTATwc- ; cor=; Ncor= a 0 0 31.9047 22.6984 20.1188 17.9334 71.3816 69.6422 0.0160035 60.2687 22.3089 70.4617 4.89718 39.5138 21.6113 0 c 0 0 22.6984 31.9047 20.1188 27.6124 12.7782 9.22231 0.0160035 9.22231 2.31758 2.31758 18.4519 16.9283 35.1661 0 g 0 0 22.6984 22.6984 20.1188 8.08775 3.4047 10.8011 0.0160035 10.3344 2.31758 24.9031 4.89718 16.9283 21.6113 0 t 0 0 22.6984 22.6984 39.6435 46.3664 12.4354 10.3344 99.952 20.1746 73.0559 2.31758 71.7537 26.6297 21.6113 0
M08214_2.00_shift5 (BORCS8-MEF2B)				; positions_7nt_m2 versus M08214_2.00 (BORCS8-MEF2B); m=10/24; ncol2=10; w=0; offset=1; strand=D; shift=5; score=0.589152; -----yTAwwwwTAr- ; cor=; Ncor= a 0 0 0 0 0 0 0 100 50 50 50 50 0 100 50 0 c 0 0 0 0 0 50 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50 0 t 0 0 0 0 0 50 100 0 50 50 50 50 100 0 0 0
M08609_2.00_shift0 (TBPL2)				; positions_7nt_m2 versus M08609_2.00 (TBPL2); m=11/24; ncol2=21; w=-4; offset=-4; strand=D; shift=0; score=0.520851; mwyswaTATATATwyC ; cor=; Ncor= a 28.6371 30.1021 12.1658 11.2231 48.3248 65.7135 8.11767 94.7483 2.07983 95.4667 1.20064 95.5608 5.90851 52.9666 24.7765 8.44102 c 27.0884 17.2576 38.3999 36.9687 12.9197 9.43762 2.49132 0.331348 0.601918 0.517672 0.438967 2.38488 2.59269 2.73321 26.6325 70.1617 g 19.3837 17.6397 22.8247 38.0802 12.2748 6.21646 1.00752 0.4462 0.225342 0.186526 0.241747 0.785493 0.791603 11.0816 19.8825 9.86462 t 24.8908 35.0006 26.6096 13.728 26.4806 18.6324 88.3835 4.47411 97.0929 3.82915 98.1186 1.26885 90.7072 33.2186 28.7085 11.5326
M00244_2.00_shift2 (WT1)				; positions_7nt_m2 versus M00244_2.00 (WT1); m=12/24; ncol2=12; w=-2; offset=-2; strand=D; shift=2; score=0.511894; --ttrwAAwATATw-- ; cor=; Ncor= a 0 0 22.5016 22.5016 30.0968 47.5232 89.9424 69.8156 30.2988 79.7833 12.4045 92.3885 5.06892 37.5588 0 0 c 0 0 22.5016 22.5016 19.9698 7.51413 9.98008 20.1718 9.90604 0.0387606 12.4095 2.53717 5.06892 17.5246 0 0 g 0 0 22.5016 22.5016 29.9635 7.51413 0.0387606 0.0387606 0.0387606 0.0387606 2.53717 2.53717 5.06892 17.5246 0 0 t 0 0 32.4952 32.4952 19.9698 37.4485 0.0387606 9.97388 59.7564 20.1392 72.6489 2.53717 84.7933 27.3919 0 0
M04857_2.00_shift3 (FOXR2)				; positions_7nt_m2 versus M04857_2.00 (FOXR2); m=13/24; ncol2=17; w=-1; offset=-1; strand=D; shift=3; score=0.507998; ---ayrTAwACATAAA ; cor=; Ncor= a 0 0 0 61.0519 10.0686 65.5193 1.72414 99.8007 56.0563 89.6181 0.060024 98.6211 0.462963 99.4702 72.0384 99.2074 c 0 0 0 6.65779 36.1556 8.21256 17.2414 0.13289 1.69014 0.0596659 90.1561 0.722259 0.0661376 0.0662252 6.09113 0.264201 g 0 0 0 23.3688 4.00458 25.1812 0.107759 0.0664452 13.7465 10.0239 0 0.328299 0.132275 0.0662252 4.22062 0.264201 t 0 0 0 8.92144 49.7712 1.08696 80.9267 0 28.507 0.298329 9.78391 0.328299 99.3386 0.397351 17.6499 0.264201
M00216_2.00_shift4 (TBPL2)				; positions_7nt_m2 versus M00216_2.00 (TBPL2); m=14/24; ncol2=7; w=0; offset=0; strand=D; shift=4; score=0.504397; ----wwtwwAw----- ; cor=; Ncor= a 0 0 0 0 31.7192 37.7028 23.8466 53.2428 29.0314 71.578 28.9234 0 0 0 0 0 c 0 0 0 0 18.8577 11.0202 12.3251 0.0769087 0.0533106 7.85215 11.9969 0 0 0 0 0 g 0 0 0 0 17.0632 11.2429 12.3251 9.53399 6.94748 19.121 10.4296 0 0 0 0 0 t 0 0 0 0 32.36 40.0342 51.5031 37.1463 63.9678 1.44887 48.65 0 0 0 0 0
M01679_2.00_shift5 (M01679_2.00)				; positions_7nt_m2 versus M01679_2.00; m=15/24; ncol2=8; w=0; offset=1; strand=D; shift=5; score=0.503296; -----WWAwAwAT--- ; cor=; Ncor= a 0 0 0 0 0 72.3485 72.1698 75.621 64.8218 86.4201 32.4244 89.1199 6.27341 0 0 0 c 0 0 0 0 0 0.0344353 0.0277469 0.0269978 0.0269978 0.0269978 0.0269978 0.0269978 0.031211 0 0 0 g 0 0 0 0 0 0.0344353 0.0277469 0.0269978 0.0269978 0.0269978 0.0269978 0.0269978 0.031211 0 0 0 t 0 0 0 0 0 27.5826 27.7747 24.3251 35.1242 13.5259 67.5216 10.8261 93.6642 0 0 0
M09432_2.00_rc_shift3 (TBP,TBPL2_rc)				; positions_7nt_m2 versus M09432_2.00_rc (TBP,TBPL2_rc); m=16/24; ncol2=10; w=-1; offset=-1; strand=R; shift=3; score=0.493761; ---sytTTTATAk--- ; cor=; Ncor= a 0 0 0 4.69799 7.38255 24.1611 1.34228 22.8188 4.02685 86.5772 14.094 77.8523 2.01342 0 0 0 c 0 0 0 57.047 49.6644 15.4362 19.4631 2.68456 4.02685 4.02685 4.69799 8.72483 15.4362 0 0 0 g 0 0 0 30.8725 3.3557 0.671141 2.01342 3.3557 6.04027 4.69799 0 8.72483 54.3624 0 0 0 t 0 0 0 7.38255 39.5973 59.7315 77.1812 71.1409 85.906 4.69799 81.2081 4.69799 28.1879 0 0 0
M11491_2.00_shift5 (M11491_2.00)				; positions_7nt_m2 versus M11491_2.00; m=17/24; ncol2=15; w=0; offset=1; strand=D; shift=5; score=0.488157; -----sTATAWAwrss ; cor=; Ncor= a 0 0 0 0 0 15.6812 4.11311 90.4884 0.771208 91.0026 68.8946 92.545 57.0694 39.8458 14.3959 21.3368 c 0 0 0 0 0 37.2751 11.8252 0 2.57069 0 0 0.771208 0.514139 11.3111 34.7044 37.7892 g 0 0 0 0 0 39.0746 4.62725 0.514139 0.514139 1.28535 0 5.14139 11.3111 40.3599 38.5604 32.9049 t 0 0 0 0 0 7.96915 79.4344 8.99743 96.144 7.71208 31.1054 1.54242 31.1054 8.48329 12.3393 7.96915
M11388_2.00_shift5 (TBP,TBPL2)				; positions_7nt_m2 versus M11388_2.00 (TBP,TBPL2); m=18/24; ncol2=15; w=0; offset=1; strand=D; shift=5; score=0.488157; -----sTATAWAwrss ; cor=; Ncor= a 0 0 0 0 0 15.6812 4.11311 90.4884 0.771208 91.0026 68.8946 92.545 57.0694 39.8458 14.3959 21.3368 c 0 0 0 0 0 37.2751 11.8252 0 2.57069 0 0 0.771208 0.514139 11.3111 34.7044 37.7892 g 0 0 0 0 0 39.0746 4.62725 0.514139 0.514139 1.28535 0 5.14139 11.3111 40.3599 38.5604 32.9049 t 0 0 0 0 0 7.96915 79.4344 8.99743 96.144 7.71208 31.1054 1.54242 31.1054 8.48329 12.3393 7.96915
M00247_2.00_rc_shift2 (WT1_rc)				; positions_7nt_m2 versus M00247_2.00_rc (WT1_rc); m=19/24; ncol2=11; w=-2; offset=-2; strand=R; shift=2; score=0.486817; --aaaTaATATAt--- ; cor=; Ncor= a 0 0 32.4394 32.4394 52.5515 9.76394 60.642 90.0965 20.4433 99.8824 12.5045 72.436 22.2542 0 0 0 c 0 0 22.5202 22.5202 12.5098 9.86274 19.5498 0.0392063 0.0392063 0.0392063 12.9989 2.51901 12.5295 0 0 0 g 0 0 22.5202 22.5202 12.5098 0.0392063 0.0392063 0.0392063 0.0392063 0.0392063 2.51901 2.51901 12.5295 0 0 0 t 0 0 22.5202 22.5202 22.4289 80.3341 19.769 9.8251 79.4782 0.0392063 71.9777 22.526 52.6869 0 0 0
M01567_2.00_shift4 (TBPL2)				; positions_7nt_m2 versus M01567_2.00 (TBPL2); m=20/24; ncol2=7; w=0; offset=0; strand=D; shift=4; score=0.486009; ----wwwwtAw----- ; cor=; Ncor= a 0 0 0 0 31.5311 34.5705 27.1982 58.3542 21.9565 93.4996 42.2777 0 0 0 0 0 c 0 0 0 0 18.9343 14.1966 11.058 0.086859 0.643432 0.0353646 0.0470878 0 0 0 0 0 g 0 0 0 0 20.7174 21.1788 15.5359 11.0954 18.8981 5.19636 9.52823 0 0 0 0 0 t 0 0 0 0 28.8172 30.0541 46.2079 30.4636 58.502 1.26866 48.147 0 0 0 0 0
M11390_2.00_shift6 (TBP,TBPL2)				; positions_7nt_m2 versus M11390_2.00 (TBP,TBPL2); m=21/24; ncol2=8; w=0; offset=2; strand=D; shift=6; score=0.485752; ------tATAAATw-- ; cor=; Ncor= a 0 0 0 0 0 0 6.38298 72.3404 0 100 100 85.1064 6.38298 44.6809 0 0 c 0 0 0 0 0 0 8.51064 0 0 0 0 2.12766 6.38298 8.51064 0 0 g 0 0 0 0 0 0 19.1489 12.766 0 0 0 8.51064 12.766 8.51064 0 0 t 0 0 0 0 0 0 65.9574 14.8936 100 0 0 4.25532 74.4681 38.2979 0 0
M00248_2.00_shift1 (WT1)				; positions_7nt_m2 versus M00248_2.00 (WT1); m=22/24; ncol2=13; w=-3; offset=-3; strand=D; shift=1; score=0.48182; -aaTaTTATATkta-- ; cor=; Ncor= a 0 32.4631 39.6939 9.99275 65.2095 22.5183 0.0408538 69.7375 0.0408538 82.7733 4.93882 15.0481 19.9776 32.2609 0 0 c 0 22.5123 20.102 9.99275 14.9523 2.46114 0.0408538 0.0408538 10.3863 2.52855 4.93882 15.0481 19.9776 22.5797 0 0 g 0 22.5123 20.102 9.99275 5.06322 2.46114 0.0408538 9.68195 0.0408538 2.52855 4.93882 44.8494 19.9776 22.5797 0 0 t 0 22.5123 20.102 70.0218 14.775 72.5594 99.8774 20.5397 89.532 12.1696 85.1835 25.0544 40.0671 22.5797 0 0
M07738_2.00_shift5 (ZNF649)				; positions_7nt_m2 versus M07738_2.00 (ZNF649); m=23/24; ncol2=6; w=0; offset=1; strand=D; shift=5; score=0.44268; -----TTATAT----- ; cor=; Ncor= a 0 0 0 0 0 0.0515464 0.0515464 99.8454 0.0515464 99.8454 0.0515464 0 0 0 0 0 c 0 0 0 0 0 0.0515464 0.0515464 0.0515464 0.0515464 0.0515464 0.0515464 0 0 0 0 0 g 0 0 0 0 0 0.0515464 0.0515464 0.0515464 0.0515464 0.0515464 0.0515464 0 0 0 0 0 t 0 0 0 0 0 99.8454 99.8454 0.0515464 99.8454 0.0515464 99.8454 0 0 0 0 0
M08377_2.00_rc_shift3 (ZSCAN16_rc)				; positions_7nt_m2 versus M08377_2.00_rc (ZSCAN16_rc); m=24/24; ncol2=24; w=-1; offset=-1; strand=R; shift=3; score=0.441358; ---AyATATAYAyAyA ; cor=; Ncor= a 0 0 0 84.6715 3.2847 82.8467 2.9197 94.1606 5.4745 95.6204 0 89.0511 4.0146 97.4453 0 96.7153 c 0 0 0 0 27.7372 2.9197 12.7737 0 17.5182 0 27.3723 0.7299 42.3358 1.4599 55.1095 2.9197 g 0 0 0 9.1241 5.8394 14.2336 1.0949 5.8394 1.8248 4.3796 0 7.6642 0 0.7299 4.7445 0.365 t 0 0 0 6.2044 63.1387 0 83.2117 0 75.1825 0 72.6277 2.5547 53.6496 0.365 40.146 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv4_m2_shift2 (oligos_6nt_mkv4_m2)				; oligos_6nt_mkv4_m2; m=0 (reference); ncol1=17; shift=2; ncol=19; --ssgCtGGGCAGGGCass ; Alignment reference a 0 0 728 729 327 165 327 138 224 197 194 3071 106 207 178 223 2189 583 703 c 0 0 1243 1291 675 3547 452 237 351 272 3556 399 206 241 175 3523 786 1121 1180 g 0 0 1709 1600 2827 403 705 3757 3443 3644 388 561 3827 3677 3757 339 808 1936 1697 t 0 0 570 630 421 135 2766 118 232 137 112 219 111 125 140 165 467 610 670
M08876_2.00_rc_shift1 (KLF3_rc)				; oligos_6nt_mkv4_m2 versus M08876_2.00_rc (KLF3_rc); m=1/30; ncol2=19; w=-1; offset=-1; strand=R; shift=1; score=0.667258; -ggrgrdGGGyGGGGcygg ; cor=; Ncor= a 0 21.2851 22.6908 25.9036 24.498 32.7309 34.5382 3.41365 0.60241 0.401606 8.63454 0.803213 0.401606 18.4739 7.63052 8.43373 18.2731 13.0522 9.23695 c 0 18.8755 22.2892 20.4819 18.6747 24.6988 4.41767 0 0 0.803213 64.257 0.60241 2.61044 1.80723 1.00402 61.8474 38.1526 20.4819 24.2972 g 0 47.1888 46.1847 42.3695 49.5984 31.5261 35.9438 96.5863 99.1968 98.5944 0 98.1928 72.49 75.502 84.3373 14.8594 16.2651 49.5984 53.012 t 0 12.6506 8.83534 11.245 7.22892 11.0442 25.1004 0 0.200803 0.200803 27.1084 0.401606 24.498 4.21687 7.02811 14.8594 27.3092 16.8675 13.4538
M08982_2.00_rc_shift1 (M08982_2.00_rc)				; oligos_6nt_mkv4_m2 versus M08982_2.00_rc; m=2/30; ncol2=19; w=-1; offset=-1; strand=R; shift=1; score=0.667258; -ggrgrdGGGyGGGGcygg ; cor=; Ncor= a 0 21.2851 22.6908 25.9036 24.498 32.7309 34.5382 3.41365 0.60241 0.401606 8.63454 0.803213 0.401606 18.4739 7.63052 8.43373 18.2731 13.0522 9.23695 c 0 18.8755 22.2892 20.4819 18.6747 24.6988 4.41767 0 0 0.803213 64.257 0.60241 2.61044 1.80723 1.00402 61.8474 38.1526 20.4819 24.2972 g 0 47.1888 46.1847 42.3695 49.5984 31.5261 35.9438 96.5863 99.1968 98.5944 0 98.1928 72.49 75.502 84.3373 14.8594 16.2651 49.5984 53.012 t 0 12.6506 8.83534 11.245 7.22892 11.0442 25.1004 0 0.200803 0.200803 27.1084 0.401606 24.498 4.21687 7.02811 14.8594 27.3092 16.8675 13.4538
M08347_2.00_shift2 (ZNF543)				; oligos_6nt_mkv4_m2 versus M08347_2.00 (ZNF543); m=3/30; ncol2=12; w=0; offset=0; strand=D; shift=2; score=0.609222; --sssCWGGsCaGs----- ; cor=; Ncor= a 0 0 0.15625 8.28125 18.2812 0.15625 25.7812 0.15625 0.15625 20.1562 0.15625 62.0313 0.15625 0.15625 0 0 0 0 0 c 0 0 31.4063 48.9063 38.9063 76.4063 0.15625 0.15625 0.15625 28.2813 99.5313 17.0313 20.7812 43.2813 0 0 0 0 0 g 0 0 58.9063 42.6563 37.0313 23.2812 0.15625 99.5313 99.5313 44.5312 0.15625 8.28125 77.0312 41.4062 0 0 0 0 0 t 0 0 9.53125 0.15625 5.78125 0.15625 73.9062 0.15625 0.15625 7.03125 0.15625 12.6563 2.03125 15.1562 0 0 0 0 0
M08920_2.00_rc_shift1 (SP3,SP6_rc)				; oligos_6nt_mkv4_m2 versus M08920_2.00_rc (SP3,SP6_rc); m=4/30; ncol2=20; w=-1; offset=-1; strand=R; shift=1; score=0.607044; -gggrggGGGcGGGGcsrg ; cor=; Ncor= a 0 20.7605 17.5602 22.8012 27.6205 17.1837 12.0783 13.8554 0.240964 0.963855 23.4488 4.44277 0.722892 18.9458 9.51807 11.4157 11.2048 25.753 20.0602 c 0 22.6431 21.8373 22.003 21.9277 19.9699 7.5 0.240964 1.0241 1.95783 62.756 3.43373 1.4759 3.49398 13.3133 55.3916 36.7169 13.2982 16.747 g 0 41.8599 47.4849 43.9006 38.9307 55.4669 63.8253 85.4819 97.741 96.6265 5.06024 89.0211 87.1687 71.9277 73.4639 23.9157 31.5512 44.9849 51.5813 t 0 14.7364 13.1175 11.2952 11.5211 7.37952 16.5964 0.421687 0.993976 0.451807 8.73494 3.10241 10.6325 5.63253 3.70482 9.27711 20.5271 15.9639 11.6114
M08978_2.00_rc_shift1 (M08978_2.00_rc)				; oligos_6nt_mkv4_m2 versus M08978_2.00_rc; m=5/30; ncol2=20; w=-1; offset=-1; strand=R; shift=1; score=0.607044; -gggrggGGGcGGGGcsrg ; cor=; Ncor= a 0 20.7605 17.5602 22.8012 27.6205 17.1837 12.0783 13.8554 0.240964 0.963855 23.4488 4.44277 0.722892 18.9458 9.51807 11.4157 11.2048 25.753 20.0602 c 0 22.6431 21.8373 22.003 21.9277 19.9699 7.5 0.240964 1.0241 1.95783 62.756 3.43373 1.4759 3.49398 13.3133 55.3916 36.7169 13.2982 16.747 g 0 41.8599 47.4849 43.9006 38.9307 55.4669 63.8253 85.4819 97.741 96.6265 5.06024 89.0211 87.1687 71.9277 73.4639 23.9157 31.5512 44.9849 51.5813 t 0 14.7364 13.1175 11.2952 11.5211 7.37952 16.5964 0.421687 0.993976 0.451807 8.73494 3.10241 10.6325 5.63253 3.70482 9.27711 20.5271 15.9639 11.6114
M08965_2.00_rc_shift1 (M08965_2.00_rc)				; oligos_6nt_mkv4_m2 versus M08965_2.00_rc; m=6/30; ncol2=15; w=-1; offset=-1; strand=R; shift=1; score=0.581469; -ggggswGGGhGkGGc--- ; cor=; Ncor= a 0 24.2485 12.6253 19.8397 16.2325 15.8317 46.2926 4.40882 0.400802 1.002 26.2525 3.40681 8.61723 4.20842 5.81162 20.2405 0 0 0 c 0 11.022 9.01804 14.8297 17.8357 46.2926 2.20441 0 0.200401 0.801603 30.8617 1.002 3.00601 0.601202 3.80762 59.519 0 0 0 g 0 47.6954 66.1323 55.1102 54.3086 29.0581 17.0341 94.7896 99.1984 97.7956 0.200401 94.3888 60.9218 94.3888 85.3707 7.81563 0 0 0 t 0 17.0341 12.2244 10.2204 11.6232 8.81764 34.4689 0.801603 0.200401 0.400802 42.6854 1.2024 27.4549 0.801603 5.01002 12.4248 0 0 0
M08299_2.00_rc_shift5 (KLF12_rc)				; oligos_6nt_mkv4_m2 versus M08299_2.00_rc (KLF12_rc); m=7/30; ncol2=15; w=0; offset=3; strand=R; shift=5; score=0.579487; -----vgGGGCGkGGCcgg ; cor=; Ncor= a 0 0 0 0 0 25.6513 15.0301 13.2265 0 0 7.014 0 0.4008 8.016 2.6052 5.01 9.6192 20.2405 18.2365 c 0 0 0 0 0 31.4629 10.8216 0 0 0 78.5571 0 5.6112 0.4008 3.8076 77.7555 49.8998 20.4409 17.2345 g 0 0 0 0 0 32.6653 55.1102 86.7735 100 100 0.2004 100 63.3267 87.1743 87.3747 5.01 23.6473 39.479 55.3106 t 0 0 0 0 0 10.2204 19.0381 0 0 0 14.2285 0 30.6613 4.4088 6.2124 12.2244 16.8337 19.8397 9.2184
M08871_2.00_rc_shift6 (KLF1_rc)				; oligos_6nt_mkv4_m2 versus M08871_2.00_rc (KLF1_rc); m=8/30; ncol2=14; w=0; offset=4; strand=R; shift=6; score=0.540114; ------rGGGyGkGGCygg ; cor=; Ncor= a 0 0 0 0 0 0 33.9468 0.408998 0.204499 0 9.20245 1.43149 2.45399 3.88548 2.45399 6.13497 16.7689 14.3149 10.4294 c 0 0 0 0 0 0 3.27198 0.204499 0.408998 0 52.7607 0 1.02249 0.408998 2.24949 68.5072 45.8078 19.8364 20.2454 g 0 0 0 0 0 0 38.6503 98.9775 98.773 99.7955 0 97.7505 53.5787 90.3885 86.2986 16.7689 9.40695 47.2393 52.9652 t 0 0 0 0 0 0 24.1309 0.408998 0.613497 0.204499 38.0368 0.817996 42.9448 5.31697 8.99796 8.58896 28.0164 18.6094 16.3599
M09008_2.00_rc_shift6 (M09008_2.00_rc)				; oligos_6nt_mkv4_m2 versus M09008_2.00_rc; m=9/30; ncol2=14; w=0; offset=4; strand=R; shift=6; score=0.529958; ------dGGGyGkGGcygg ; cor=; Ncor= a 0 0 0 0 0 0 35.022 0.440529 0.440529 0.660793 11.0132 0.881057 2.42291 2.86344 1.98238 6.82819 17.8414 9.91189 4.62555 c 0 0 0 0 0 0 2.86344 0 0.440529 0 43.6123 0 0.881057 0.660793 1.76211 64.5374 40.0881 12.7753 17.1806 g 0 0 0 0 0 0 28.6344 98.4581 99.1189 99.1189 0.220264 98.4581 49.3392 91.1894 91.1894 15.859 13.4361 53.304 62.1145 t 0 0 0 0 0 0 33.4802 1.10132 0 0.220264 45.1542 0.660793 47.3568 5.28634 5.06608 12.7753 28.6344 24.0088 16.0793
M07701_2.00_shift4 (ZNF765)				; oligos_6nt_mkv4_m2 versus M07701_2.00 (ZNF765); m=10/30; ncol2=18; w=0; offset=2; strand=D; shift=4; score=0.529241; ----cCTsGGCyasGCmCt ; cor=; Ncor= a 0 0 0 0 11.7823 3.5228 3.5228 8.67586 7.30055 0.0859221 6.61317 23.8004 48.8956 18.9831 2.49174 13.8416 36.1675 3.5228 23.1183 c 0 0 0 0 56.7803 78.7902 8.32662 25.5132 0.0859221 0.0859221 84.6146 28.956 18.2929 25.5275 0.42961 73.6223 44.0834 85.6594 6.26665 g 0 0 0 0 19.6711 7.29046 11.4248 48.5325 89.0907 98.0238 2.48891 6.95459 24.4793 38.2218 96.3054 8.33161 16.9136 9.35713 14.8567 t 0 0 0 0 11.7663 10.3966 76.7258 17.2785 3.5228 1.80436 6.28327 40.289 8.33217 17.2675 0.773298 4.20452 2.83543 1.46067 55.7583
M08879_2.00_rc_shift5 (KLF12_rc)				; oligos_6nt_mkv4_m2 versus M08879_2.00_rc (KLF12_rc); m=11/30; ncol2=11; w=0; offset=3; strand=R; shift=5; score=0.513269; -----mgGGGCGGGGC--- ; cor=; Ncor= a 0 0 0 0 0 37.8319 24.7788 6.41593 0 0 9.0708 2.21239 0.442478 9.73451 1.32743 13.0531 0 0 0 c 0 0 0 0 0 34.292 3.09735 0 0.221239 0 87.8319 0.221239 0.884956 0 0.663717 80.0885 0 0 0 g 0 0 0 0 0 19.469 58.1858 93.1416 99.5575 100 0.221239 96.0177 79.2035 86.2832 96.4602 2.87611 0 0 0 t 0 0 0 0 0 8.40708 13.9381 0.442478 0.221239 0 2.87611 1.54867 19.469 3.9823 1.54867 3.9823 0 0 0
M08293_2.00_rc_shift6 (KLF1_rc)				; oligos_6nt_mkv4_m2 versus M08293_2.00_rc (KLF1_rc); m=12/30; ncol2=15; w=0; offset=4; strand=R; shift=6; score=0.508739; ------dGGGyGkGGccgg ; cor=; Ncor= a 0 0 0 0 0 0 27.2 1.4 0 0 7.6 0 0 8.4 4 6.4 15.4 16.6 15 c 0 0 0 0 0 0 8.4 0 0 0 51.8 0 1.6 0.2 5.8 64 46.2 23.4 17.6 g 0 0 0 0 0 0 27.6 98.6 100 100 0 100 51.6 86.2 80.8 14.2 16.8 43 45.4 t 0 0 0 0 0 0 36.8 0 0 0 40.6 0 46.8 5.2 9.4 15.4 21.6 17 22
M08868_2.00_rc_shift6 (KLF5_rc)				; oligos_6nt_mkv4_m2 versus M08868_2.00_rc (KLF5_rc); m=13/30; ncol2=14; w=0; offset=4; strand=R; shift=6; score=0.508636; ------wGGGtGkGGctgg ; cor=; Ncor= a 0 0 0 0 0 0 42.2 4.6 0.8 2.4 17.8 4.6 4 1.6 5 10.6 24.8 10.4 15.4 c 0 0 0 0 0 0 3.4 0.4 0.8 3.6 18.4 0.2 1 0 3 63.4 18.2 13.6 12.4 g 0 0 0 0 0 0 20.4 94.4 96.8 93 0.8 94.2 54.4 96.4 83 11 19.2 60.6 50.2 t 0 0 0 0 0 0 34 0.6 1.6 1 63 1 40.6 2 9 15 37.8 15.4 22
M08298_2.00_rc_shift6 (KLF7_rc)				; oligos_6nt_mkv4_m2 versus M08298_2.00_rc (KLF7_rc); m=14/30; ncol2=11; w=0; offset=4; strand=R; shift=6; score=0.493424; ------kGGGCGkgGcc-- ; cor=; Ncor= a 0 0 0 0 0 0 24.055 0 0 0 0 0 0 18.5567 2.0619 9.9656 12.0275 0 0 c 0 0 0 0 0 0 9.622 0 0 0 80.756 0 0 0 0 57.0447 46.7354 0 0 g 0 0 0 0 0 0 37.1134 100 100 100 0 100 67.6976 61.512 88.6598 17.5258 20.2749 0 0 t 0 0 0 0 0 0 29.2096 0 0 0 19.244 0 32.3024 19.9313 9.2784 15.4639 20.9622 0 0
M04464_2.00_rc_shift6 (KLF4_rc)				; oligos_6nt_mkv4_m2 versus M04464_2.00_rc (KLF4_rc); m=15/30; ncol2=11; w=0; offset=4; strand=R; shift=6; score=0.464516; ------tGGGyGkGGyg-- ; cor=; Ncor= a 0 0 0 0 0 0 23.9092 2.9539 0.0192901 0.273117 5.25245 3.70162 3.45759 3.94129 6.10943 9.84729 21.7136 0 0 c 0 0 0 0 0 0 15.0068 0.865475 0.270062 0 61.163 0.244269 4.50207 4.86478 3.12185 35.545 18.0164 0 0 g 0 0 0 0 0 0 22.9896 96.1806 98.6111 99.7269 0 96.0541 38.4297 84.3008 85.8006 22.8541 43.525 0 0 t 0 0 0 0 0 0 38.0943 0 1.09954 0 33.5846 0 53.6107 6.89314 4.96811 31.7536 16.7449 0 0
M08021_2.00_rc_shift6 (M08021_2.00_rc)				; oligos_6nt_mkv4_m2 versus M08021_2.00_rc; m=16/30; ncol2=11; w=0; offset=4; strand=R; shift=6; score=0.455414; ------wGGGyGkGGyy-- ; cor=; Ncor= a 0 0 0 0 0 0 38.206 1.3289 0 0 10.6312 0 3.9867 9.63459 5.6478 9.6346 11.6279 0 0 c 0 0 0 0 0 0 2.6578 0 0 0 36.8771 0 0.996699 0 2.3256 56.1462 39.5349 0 0 g 0 0 0 0 0 0 19.6013 98.6711 100 100 0 100 49.5017 86.7109 87.3754 6.9767 21.2625 0 0 t 0 0 0 0 0 0 39.5349 0 0 0 52.4917 0 45.515 3.6545 4.6512 27.2425 27.5748 0 0
M04456_2.00_rc_shift6 (KLF2_rc)				; oligos_6nt_mkv4_m2 versus M04456_2.00_rc (KLF2_rc); m=17/30; ncol2=11; w=0; offset=4; strand=R; shift=6; score=0.454425; ------kGGGyGkGGys-- ; cor=; Ncor= a 0 0 0 0 0 0 20.752 5.78893 0.324763 0.0561167 0.578991 0 2.87466 1.08241 2.98084 4.88794 17.8682 0 0 c 0 0 0 0 0 0 17.7269 3.61168 2.24628 0.701459 59.5533 0 6.82561 10.9717 6.52945 37.46 26.4348 0 0 g 0 0 0 0 0 0 30.393 90.5994 95.724 99.2424 1.9024 100 42.1117 87.0111 83.6764 19.6371 34.4925 0 0 t 0 0 0 0 0 0 31.1281 0 1.70501 0 37.9653 0 48.188 0.934809 6.81334 38.0149 21.2044 0 0
M04432_2.00_rc_shift6 (KLF12_rc)				; oligos_6nt_mkv4_m2 versus M04432_2.00_rc (KLF12_rc); m=18/30; ncol2=11; w=0; offset=4; strand=R; shift=6; score=0.453222; ------wGGGCGTGGym-- ; cor=; Ncor= a 0 0 0 0 0 0 28.0783 6.56511 0 0.0447685 0.0161204 0.031998 0.255191 0.171081 0.687988 0.467733 32.6035 0 0 c 0 0 0 0 0 0 11.5691 0.041816 0 0 83.9387 0 1.24116 0.627297 0.216933 67.0312 36.1757 0 0 g 0 0 0 0 0 0 15.7603 93.3154 99.8275 99.9041 0.241805 99.968 7.90512 98.9799 96.8204 0.790089 17.2012 0 0 t 0 0 0 0 0 0 44.5923 0.0776583 0.172546 0.051164 15.8033 0 90.5985 0.221772 2.2747 31.711 14.0196 0 0
M08086_2.00_rc_shift6 (KLF5_rc)				; oligos_6nt_mkv4_m2 versus M08086_2.00_rc (KLF5_rc); m=19/30; ncol2=10; w=0; offset=4; strand=R; shift=6; score=0.445053; ------dGGGyGKGGc--- ; cor=; Ncor= a 0 0 0 0 0 0 30.13 3.49717 0 0 24.8182 0 4.15105 11.7772 12.5707 19.0067 0 0 0 c 0 0 0 0 0 0 0 0 0 0 38.0721 0 0 0 0 55.6315 0 0 0 g 0 0 0 0 0 0 41.1065 96.5028 100 100 0 100 70.3034 88.2228 87.4293 14.863 0 0 0 t 0 0 0 0 0 0 28.7635 0 0 0 37.1097 0 25.5455 0 0 10.4989 0 0 0
M08938_2.00_rc_shift4 (SP1_rc)				; oligos_6nt_mkv4_m2 versus M08938_2.00_rc (SP1_rc); m=20/30; ncol2=22; w=0; offset=2; strand=R; shift=4; score=0.443938; ----rgGGGGCGGGGCckG ; cor=; Ncor= a 0 0 0 0 31.4629 19.2385 4.40882 5.81162 0 0.400802 3.20641 1.002 0.200401 6.61323 1.80361 6.01202 5.81162 14.4289 8.21643 c 0 0 0 0 20.6413 10.02 0.801603 0.801603 0.801603 0 95.3908 0 0.801603 0.200401 3.00601 86.7735 59.519 11.2224 17.6353 g 0 0 0 0 33.2665 66.9339 80.9619 93.3868 99.1984 99.5992 0.400802 98.7976 92.5852 91.5832 91.1824 1.40281 19.0381 46.2926 70.5411 t 0 0 0 0 14.6293 3.80762 13.8277 0 0 0 1.002 0.200401 6.41283 1.60321 4.00802 5.81162 15.6313 28.0561 3.60721
M08246_2.00_rc_shift6 (KLF10_rc)				; oligos_6nt_mkv4_m2 versus M08246_2.00_rc (KLF10_rc); m=21/30; ncol2=10; w=0; offset=4; strand=R; shift=6; score=0.442818; ------wGGGyGkGGc--- ; cor=; Ncor= a 0 0 0 0 0 0 33.8557 2.0279 0.3227 0.3225 6.3696 0.5068 0.9675 6.0874 2.8403 5.8745 0 0 0 c 0 0 0 0 0 0 1.8688 0.2082 0.3001 0.8289 44.1938 0.3461 1.8427 1.0613 3.0023 66.0954 0 0 0 g 0 0 0 0 0 0 23.5703 97.6252 99.0777 98.4802 0.2537 98.3641 50.1723 89.9687 87.4843 6.4761 0 0 0 t 0 0 0 0 0 0 40.7052 0.1386 0.2997 0.3685 49.183 0.7831 47.0175 2.8825 6.673 21.554 0 0 0
M08243_2.00_rc_shift6 (KLF4_rc)				; oligos_6nt_mkv4_m2 versus M08243_2.00_rc (KLF4_rc); m=22/30; ncol2=10; w=0; offset=4; strand=R; shift=6; score=0.442817; ------wGGGyGkGGc--- ; cor=; Ncor= a 0 0 0 0 0 0 33.8558 2.028 0.3227 0.3225 6.3696 0.5068 0.9675 6.0875 2.8404 5.8745 0 0 0 c 0 0 0 0 0 0 1.8688 0.2081 0.3 0.8289 44.1938 0.346 1.8427 1.0613 3.0022 66.0954 0 0 0 g 0 0 0 0 0 0 23.5703 97.6252 99.0776 98.4801 0.2536 98.364 50.1722 89.9686 87.4843 6.4761 0 0 0 t 0 0 0 0 0 0 40.7052 0.1386 0.2997 0.3685 49.183 0.7831 47.0176 2.8826 6.6731 21.5541 0 0 0
M10294_2.00_rc_shift6 (SP1_rc)				; oligos_6nt_mkv4_m2 versus M10294_2.00_rc (SP1_rc); m=23/30; ncol2=10; w=0; offset=4; strand=R; shift=6; score=0.436789; ------grGGCrkGgw--- ; cor=; Ncor= a 0 0 0 0 0 0 18.1818 27.2727 0 0 0 27.2727 0 9.09091 9.09091 27.2727 0 0 0 c 0 0 0 0 0 0 9.09091 9.09091 0 0 72.7273 0 9.09091 0 18.1818 18.1818 0 0 0 g 0 0 0 0 0 0 54.5455 54.5455 100 100 18.1818 54.5455 63.6364 72.7273 63.6364 0 0 0 0 t 0 0 0 0 0 0 18.1818 9.09091 0 0 9.09091 18.1818 27.2727 18.1818 9.09091 54.5455 0 0 0
M00341_2.00_rc_shift8 (PAX6_rc)				; oligos_6nt_mkv4_m2 versus M00341_2.00_rc (PAX6_rc); m=24/30; ncol2=10; w=0; offset=6; strand=R; shift=8; score=0.432885; --------GsCCGGGsAs- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 8.94651 4.8922 0.0242149 0.0477758 0.0698091 0.288319 4.55737 2.35712 99.8904 15.626 0 c 0 0 0 0 0 0 0 0 0.566241 49.7814 90.8504 70.7225 0.000919215 3.02319 0.776271 29.8875 0.0195276 33.4127 0 g 0 0 0 0 0 0 0 0 88.3463 38.384 5.80787 23.3072 99.2865 95.2316 93.3865 63.9078 0.0456877 46.0135 0 t 0 0 0 0 0 0 0 0 2.14098 6.94236 3.31751 5.92253 0.642756 1.4569 1.27985 3.84757 0.0443374 4.94776 0
M08300_2.00_rc_shift0 (ZNF549_rc)				; oligos_6nt_mkv4_m2 versus M08300_2.00_rc (ZNF549_rc); m=25/30; ncol2=13; w=-2; offset=-2; strand=R; shift=0; score=0.432403; ATGAAyyGGGCAG------ ; cor=; Ncor= a 100 3.2468 3.6797 76.6234 81.8182 2.1645 11.2554 19.0476 1.2987 5.6277 1.7316 93.0736 1.2987 0 0 0 0 0 0 c 0 1.7316 9.7403 6.71 1.0823 33.1169 28.7879 0 0 3.6797 97.8355 2.1645 0.6494 0 0 0 0 0 0 g 0 19.9134 76.8398 11.039 12.1212 2.381 1.9481 79.2208 98.0519 90.6926 0 3.4632 97.4026 0 0 0 0 0 0 t 0 75.1082 9.7403 5.6277 4.9784 62.3377 58.0087 1.7316 0.6494 0 0.4329 1.2987 0.6494 0 0 0 0 0 0
M09502_2.00_rc_shift6 (KLF5_rc)				; oligos_6nt_mkv4_m2 versus M09502_2.00_rc (KLF5_rc); m=26/30; ncol2=10; w=0; offset=4; strand=R; shift=6; score=0.425687; ------wGGGyGkGGC--- ; cor=; Ncor= a 0 0 0 0 0 0 36.4 11.6 0.1 0.1 8.1 1.5 4.6 5.5 6.2 7.7 0 0 0 c 0 0 0 0 0 0 5.5 0.1 0.1 0.1 42.8 0.1 2.3 0.1 6 75.6 0 0 0 g 0 0 0 0 0 0 22.4 88.2 99.7 99.7 0.1 97.2 40.5 92.2 69.4 1.9 0 0 0 t 0 0 0 0 0 0 35.7 0.1 0.1 0.1 49 1.2 52.6 2.2 18.4 14.8 0 0 0
M08894_2.00_rc_shift6 (KLF4_rc)				; oligos_6nt_mkv4_m2 versus M08894_2.00_rc (KLF4_rc); m=27/30; ncol2=10; w=0; offset=4; strand=R; shift=6; score=0.42567; ------wGGGyGkGGy--- ; cor=; Ncor= a 0 0 0 0 0 0 42 0.8 0.2 1.2 2.6 0.4 0.4 5 1.4 5.4 0 0 0 c 0 0 0 0 0 0 2 0 0 0.4 44.4 0.4 0.4 1.6 3.8 62.8 0 0 0 g 0 0 0 0 0 0 20.4 98.8 99.2 97.8 0.4 99.2 43.8 88.6 88.2 6.8 0 0 0 t 0 0 0 0 0 0 35.6 0.4 0.6 0.6 52.6 0 55.4 4.8 6.6 25 0 0 0
M08326_2.00_rc_shift6 (SP2_rc)				; oligos_6nt_mkv4_m2 versus M08326_2.00_rc (SP2_rc); m=28/30; ncol2=9; w=0; offset=4; strand=R; shift=6; score=0.418159; ------gGGGCGGGg---- ; cor=; Ncor= a 0 0 0 0 0 0 11.4548 0.083612 0.083612 0.083612 0.083612 0.083612 0.083612 18.8127 21.4883 0 0 0 0 c 0 0 0 0 0 0 1.08696 0.083612 0.083612 0.083612 93.3946 0.083612 0.083612 0.083612 14.7993 0 0 0 0 g 0 0 0 0 0 0 64.9666 99.7492 99.7492 99.7492 0.083612 99.7492 97.408 74.3311 63.6288 0 0 0 0 t 0 0 0 0 0 0 22.4916 0.083612 0.083612 0.083612 6.43813 0.083612 2.42475 6.77258 0.083612 0 0 0 0
M08384_2.00_shift4 (ZNF121)				; oligos_6nt_mkv4_m2 versus M08384_2.00 (ZNF121); m=29/30; ncol2=24; w=0; offset=2; strand=D; shift=4; score=0.416497; ----vCkGGvCmrsryaGc ; cor=; Ncor= a 0 0 0 0 28.6074 4.44631 22.2315 1.42617 3.77517 25.5872 0.0838926 56.7953 41.3591 19.8826 27.2651 6.7953 64.5134 1.76174 9.47987 c 0 0 0 0 41.6946 81.6275 5.78859 0.755034 11.4933 37.3322 98.0705 35.9899 9.1443 28.2718 11.8289 50.0839 5.11745 4.11074 62.8356 g 0 0 0 0 27.6007 7.13087 45.0503 95.7215 82.6342 35.9899 1.76174 0.755034 41.3591 41.6946 45.0503 15.1846 6.7953 82.6342 7.46644 t 0 0 0 0 2.09732 6.7953 26.9295 2.09732 2.09732 1.0906 0.0838926 6.45973 8.13758 10.151 15.8557 27.9362 23.5738 11.4933 20.2181
M08290_2.00_rc_shift7 (MAZ_rc)				; oligos_6nt_mkv4_m2 versus M08290_2.00_rc (MAZ_rc); m=30/30; ncol2=9; w=0; offset=5; strand=R; shift=7; score=0.402422; -------GGGmGGGGs--- ; cor=; Ncor= a 0 0 0 0 0 0 0 11.0911 0.059952 0.059952 55.6954 0.059952 0.059952 0.059952 7.73381 7.2542 0 0 0 c 0 0 0 0 0 0 0 0.059952 0.059952 0.059952 35.3118 0.059952 0.059952 0.059952 0.059952 37.7098 0 0 0 g 0 0 0 0 0 0 0 88.789 99.8201 99.8201 0.059952 99.8201 99.8201 99.8201 92.1463 52.8177 0 0 0 t 0 0 0 0 0 0 0 0.059952 0.059952 0.059952 8.93285 0.059952 0.059952 0.059952 0.059952 2.21823 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv4_m1_shift7 (oligos_6nt_mkv4_m1)				; oligos_6nt_mkv4_m1; m=0 (reference); ncol1=11; shift=7; ncol=18; -------ssGCGGAGCss ; Alignment reference a 0 0 0 0 0 0 0 2477 1752 736 77 179 169 11341 264 412 1936 2079 c 0 0 0 0 0 0 0 5049 6877 2288 14466 487 1016 2434 575 13567 5116 4692 g 0 0 0 0 0 0 0 5416 4352 10937 72 14039 13418 580 13692 492 5302 5971 t 0 0 0 0 0 0 0 1905 1866 886 232 142 244 492 316 376 2493 2105
M07717_2.00_rc_shift5 (ZNF441_rc)				; oligos_6nt_mkv4_m1 versus M07717_2.00_rc (ZNF441_rc); m=1/23; ncol2=12; w=-2; offset=-2; strand=R; shift=5; score=0.666934; -----gGrGgCGGAGyy- ; cor=; Ncor= a 0 0 0 0 0 14.0766 9.57207 36.5991 11.3739 23.0856 0.112613 0.112613 0.112613 78.491 0.112613 0.112613 6.41892 0 c 0 0 0 0 0 22.1847 20.3829 6.41892 7.77027 10.9234 99.6622 0.112613 0.112613 0.112613 0.112613 51.0135 48.3108 0 g 0 0 0 0 0 47.8604 69.9324 56.4189 80.7432 65.4279 0.112613 99.6622 99.6622 21.2838 99.6622 1.46396 18.5811 0 t 0 0 0 0 0 15.8784 0.112613 0.563063 0.112613 0.563063 0.112613 0.112613 0.112613 0.112613 0.112613 47.4099 26.6892 0
M07585_2.00_shift7 (ZNF331)				; oligos_6nt_mkv4_m1 versus M07585_2.00 (ZNF331); m=2/23; ncol2=12; w=0; offset=0; strand=D; shift=7; score=0.643739; -------yTGCwGAGCCC ; cor=; Ncor= a 0 0 0 0 0 0 0 3.09406 19.9257 2.59901 0.123762 52.599 1.11386 95.6683 6.55941 1.60891 21.4109 9.03465 c 0 0 0 0 0 0 0 63.9851 4.08416 2.10396 99.6287 0.618812 0.123762 0.123762 0.123762 98.1436 69.9257 79.8267 g 0 0 0 0 0 0 0 3.58911 6.55941 95.1733 0.123762 1.60891 98.6386 3.58911 92.698 0.123762 0.123762 0.618812 t 0 0 0 0 0 0 0 29.3317 69.4307 0.123762 0.123762 45.1733 0.123762 0.618812 0.618812 0.123762 8.5396 10.5198
M02698_2.00_shift6 (M02698_2.00)				; oligos_6nt_mkv4_m1 versus M02698_2.00; m=3/23; ncol2=11; w=-1; offset=-1; strand=D; shift=6; score=0.599595; ------csCGCTGAGsy- ; cor=; Ncor= a 0 0 0 0 0 0 14 16 0 0 4.0404 4.0404 8.08081 96 4 2 15.1515 0 c 0 0 0 0 0 0 45 27 91.9192 5 93.9394 2.0202 0 0 4 55 32.3232 0 g 0 0 0 0 0 0 23 55 4.0404 93 0 2.0202 85.8586 2 92 26 24.2424 0 t 0 0 0 0 0 0 18 2 4.0404 2 2.0202 91.9192 6.06061 2 0 17 28.2828 0
M11037_2.00_shift6 (M11037_2.00)				; oligos_6nt_mkv4_m1 versus M11037_2.00; m=4/23; ncol2=11; w=-1; offset=-1; strand=D; shift=6; score=0.599595; ------csCGCTGAGsy- ; cor=; Ncor= a 0 0 0 0 0 0 14 16 0 0 4.0404 4.0404 8.08081 96 4 2 15.1515 0 c 0 0 0 0 0 0 45 27 91.9192 5 93.9394 2.0202 0 0 4 55 32.3232 0 g 0 0 0 0 0 0 23 55 4.0404 93 0 2.0202 85.8586 2 92 26 24.2424 0 t 0 0 0 0 0 0 18 2 4.0404 2 2.0202 91.9192 6.06061 2 0 17 28.2828 0
M08298_2.00_rc_shift6 (KLF7_rc)				; oligos_6nt_mkv4_m1 versus M08298_2.00_rc (KLF7_rc); m=5/23; ncol2=11; w=-1; offset=-1; strand=R; shift=6; score=0.590347; ------kGGGCGkgGcc- ; cor=; Ncor= a 0 0 0 0 0 0 24.055 0 0 0 0 0 0 18.5567 2.0619 9.9656 12.0275 0 c 0 0 0 0 0 0 9.622 0 0 0 80.756 0 0 0 0 57.0447 46.7354 0 g 0 0 0 0 0 0 37.1134 100 100 100 0 100 67.6976 61.512 88.6598 17.5258 20.2749 0 t 0 0 0 0 0 0 29.2096 0 0 0 19.244 0 32.3024 19.9313 9.2784 15.4639 20.9622 0
M08296_2.00_rc_shift4 (SP4_rc)				; oligos_6nt_mkv4_m1 versus M08296_2.00_rc (SP4_rc); m=6/23; ncol2=15; w=-3; offset=-3; strand=R; shift=4; score=0.557199; ----rgGRGGcGGrGCcd ; cor=; Ncor= a 0 0 0 0 32.996 19.0283 7.8947 30.3644 0.2024 0 19.8381 0 1.8219 35.0202 15.1822 7.4899 8.2996 25.9109 c 0 0 0 0 5.8704 4.8583 0 1.0121 0 0 67.6113 1.417 2.6316 3.4413 7.085 69.8381 48.583 14.9798 g 0 0 0 0 45.3441 63.9676 70.2429 68.6235 99.7976 99.7976 0 98.583 83.4008 56.2753 75.9109 11.1336 18.8259 26.5182 t 0 0 0 0 15.7895 12.1457 21.8623 0 0 0.2024 12.5506 0 12.1457 5.2632 1.8219 11.5385 24.2915 32.5911
M08323_2.00_rc_shift6 (KLF15_rc)				; oligos_6nt_mkv4_m1 versus M08323_2.00_rc (KLF15_rc); m=7/23; ncol2=15; w=-1; offset=-1; strand=R; shift=6; score=0.546444; ------GRGGcGGrGccg ; cor=; Ncor= a 0 0 0 0 0 0 17.0683 28.3133 0 0.6024 22.2892 0 0 41.7671 12.0482 19.2771 24.498 15.0602 c 0 0 0 0 0 0 3.2129 0.8032 0 0.2008 58.8353 0 3.012 1.2048 0 46.1847 36.1446 8.8353 g 0 0 0 0 0 0 69.0763 70.8835 100 99.1968 0 100 88.755 47.5904 85.3414 24.8996 23.0924 62.4498 t 0 0 0 0 0 0 10.6426 0 0 0 18.8755 0 8.2329 9.4378 2.6104 9.6386 16.2651 13.6546
M06160_2.00_rc_shift4 (M06160_2.00_rc)				; oligos_6nt_mkv4_m1 versus M06160_2.00_rc; m=8/23; ncol2=15; w=-3; offset=-3; strand=R; shift=4; score=0.516183; ----rgkGGGCGkGGCyw ; cor=; Ncor= a 0 0 0 0 36.7909 22.3473 13.3545 16.8521 0 0 5.88235 0.158983 0 21.7806 6.83625 7.47218 18.442 43.04 c 0 0 0 0 13.128 7.55627 1.43084 0 0 0 90.461 0 0 1.27186 5.40541 74.2448 42.4483 14.4 g 0 0 0 0 27.2285 62.701 42.1304 81.876 99.3641 99.2051 0 99.2051 60.5723 72.496 81.2401 0.953895 11.2878 8.96 t 0 0 0 0 22.8525 7.3955 43.0843 1.27186 0.63593 0.794913 3.6566 0.63593 39.4277 4.45151 6.51828 17.3291 27.8219 33.6
M08879_2.00_rc_shift5 (KLF12_rc)				; oligos_6nt_mkv4_m1 versus M08879_2.00_rc (KLF12_rc); m=9/23; ncol2=11; w=-2; offset=-2; strand=R; shift=5; score=0.508145; -----mgGGGCGGGGC-- ; cor=; Ncor= a 0 0 0 0 0 37.8319 24.7788 6.41593 0 0 9.0708 2.21239 0.442478 9.73451 1.32743 13.0531 0 0 c 0 0 0 0 0 34.292 3.09735 0 0.221239 0 87.8319 0.221239 0.884956 0 0.663717 80.0885 0 0 g 0 0 0 0 0 19.469 58.1858 93.1416 99.5575 100 0.221239 96.0177 79.2035 86.2832 96.4602 2.87611 0 0 t 0 0 0 0 0 8.40708 13.9381 0.442478 0.221239 0 2.87611 1.54867 19.469 3.9823 1.54867 3.9823 0 0
M10300_2.00_rc_shift4 (SP1_rc)				; oligos_6nt_mkv4_m1 versus M10300_2.00_rc (SP1_rc); m=10/23; ncol2=13; w=-3; offset=-3; strand=R; shift=4; score=0.503018; ----rggGGGCGGGgyb- ; cor=; Ncor= a 0 0 0 0 29.6296 22.2222 12.963 15.7407 0 0 17.5926 1.85185 0 19.4444 15.7407 2.77778 8.33333 0 c 0 0 0 0 19.4444 18.5185 9.25926 0.925926 0 1.85185 74.0741 4.62963 0.925926 4.62963 9.25926 50.9259 37.037 0 g 0 0 0 0 32.4074 51.8519 60.1852 82.4074 100 98.1481 0 91.6667 91.6667 70.3704 66.6667 19.4444 29.6296 0 t 0 0 0 0 18.5185 7.40741 17.5926 0.925926 0 0 8.33333 1.85185 7.40741 5.55556 8.33333 26.8519 25 0
M07616_2.00_rc_shift11 (ZNF610_rc)				; oligos_6nt_mkv4_m1 versus M07616_2.00_rc (ZNF610_rc); m=11/23; ncol2=9; w=0; offset=4; strand=R; shift=11; score=0.492568; -----------GGAGCGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 0.0814332 0.0814332 99.7557 0.0814332 0.0814332 0.0814332 0.0814332 c 0 0 0 0 0 0 0 0 0 0 0 0.0814332 0.0814332 0.0814332 0.0814332 99.7557 0.0814332 14.4137 g 0 0 0 0 0 0 0 0 0 0 0 99.7557 99.7557 0.0814332 99.7557 0.0814332 99.7557 79.886 t 0 0 0 0 0 0 0 0 0 0 0 0.0814332 0.0814332 0.0814332 0.0814332 0.0814332 0.0814332 5.61889
M01913_2.00_shift5 (DNMT1)				; oligos_6nt_mkv4_m1 versus M01913_2.00 (DNMT1); m=12/23; ncol2=10; w=-2; offset=-2; strand=D; shift=5; score=0.492547; -----ssymgCGGsr--- ; cor=; Ncor= a 0 0 0 0 0 23.4138 22.394 17.2639 27.4855 19.1374 0.00313502 0.0301987 4.00612 21.9725 30.6596 0 0 0 c 0 0 0 0 0 28.0314 26.8105 34.4193 27.4855 16.4717 99.971 20.9062 13.9827 26.5703 20.1448 0 0 0 g 0 0 0 0 0 29.7648 30.5326 23.072 24.8699 43.4514 0.0197398 79.0471 77.3099 27.6546 30.9678 0 0 0 t 0 0 0 0 0 18.79 20.2629 25.2448 20.1591 20.9396 0 0.0165734 4.70122 23.8026 18.2278 0 0 0
M08326_2.00_rc_shift6 (SP2_rc)				; oligos_6nt_mkv4_m1 versus M08326_2.00_rc (SP2_rc); m=13/23; ncol2=9; w=-1; offset=-1; strand=R; shift=6; score=0.479975; ------gGGGCGGGg--- ; cor=; Ncor= a 0 0 0 0 0 0 11.4548 0.083612 0.083612 0.083612 0.083612 0.083612 0.083612 18.8127 21.4883 0 0 0 c 0 0 0 0 0 0 1.08696 0.083612 0.083612 0.083612 93.3946 0.083612 0.083612 0.083612 14.7993 0 0 0 g 0 0 0 0 0 0 64.9666 99.7492 99.7492 99.7492 0.083612 99.7492 97.408 74.3311 63.6288 0 0 0 t 0 0 0 0 0 0 22.4916 0.083612 0.083612 0.083612 6.43813 0.083612 2.42475 6.77258 0.083612 0 0 0
M08327_2.00_rc_shift11 (ZNF610_rc)				; oligos_6nt_mkv4_m1 versus M08327_2.00_rc (ZNF610_rc); m=14/23; ncol2=9; w=0; offset=4; strand=R; shift=11; score=0.475146; -----------GGAGCGG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 11.3271 0.0670241 99.7989 0.0670241 0.0670241 0.0670241 0.0670241 c 0 0 0 0 0 0 0 0 0 0 0 5.42895 0.0670241 0.0670241 0.0670241 99.7989 0.0670241 4.89276 g 0 0 0 0 0 0 0 0 0 0 0 75.4021 99.7989 0.0670241 99.7989 0.0670241 99.7989 86.9303 t 0 0 0 0 0 0 0 0 0 0 0 7.84182 0.0670241 0.0670241 0.0670241 0.0670241 0.0670241 8.10992
M09259_2.00_shift8 (M09259_2.00)				; oligos_6nt_mkv4_m1 versus M09259_2.00; m=15/23; ncol2=7; w=0; offset=1; strand=D; shift=8; score=0.469995; --------sCCGGrr--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2.50053 0 0 0 0 57.5069 44.1707 0 0 0 c 0 0 0 0 0 0 0 0 59.1686 100 100 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 35.8303 0 0 100 100 42.4931 55.8293 0 0 0 t 0 0 0 0 0 0 0 0 2.50053 0 0 0 0 0 0 0 0 0
M09257_2.00_shift8 (MECP2)				; oligos_6nt_mkv4_m1 versus M09257_2.00 (MECP2); m=16/23; ncol2=7; w=0; offset=1; strand=D; shift=8; score=0.469995; --------sCCGGrr--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2.50053 0 0 0 0 57.5069 44.1707 0 0 0 c 0 0 0 0 0 0 0 0 59.1686 100 100 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 35.8303 0 0 100 100 42.4931 55.8293 0 0 0 t 0 0 0 0 0 0 0 0 2.50053 0 0 0 0 0 0 0 0 0
M00339_2.00_shift3 (PAX6)				; oligos_6nt_mkv4_m1 versus M00339_2.00 (PAX6); m=17/23; ncol2=13; w=-4; offset=-4; strand=D; shift=3; score=0.450314; ---grsacGgcGGwkc-- ; cor=; Ncor= a 0 0 0 22.6447 29.7397 17.8071 47.9093 5.06887 9.3262 9.19812 19.9138 2.37697 4.7031 48.1988 17.6587 19.9528 0 0 c 0 0 0 22.6447 20.3186 37.2742 17.409 65.1331 10.7374 9.44277 49.6149 11.617 4.7031 16.391 17.6587 40.1415 0 0 g 0 0 0 32.0658 29.6231 27.1116 16.603 15.3081 69.8687 60.5757 21.0027 83.6291 85.8907 7.2146 37.8474 19.9528 0 0 t 0 0 0 22.6447 20.3186 17.8071 18.0787 14.4899 10.0677 20.7834 9.4686 2.37697 4.7031 28.1956 26.8352 19.9528 0 0
M00224_2.00_rc_shift6 (KLF1_rc)				; oligos_6nt_mkv4_m1 versus M00224_2.00_rc (KLF1_rc); m=18/23; ncol2=8; w=-1; offset=-1; strand=R; shift=6; score=0.438301; ------dGGGCGkr---- ; cor=; Ncor= a 0 0 0 0 0 0 28.5511 0.110619 0.110619 0.110619 0.110619 0.110619 0.110619 49.8756 0 0 0 0 c 0 0 0 0 0 0 0.142045 0.110619 0.110619 0.110619 99.6681 0.110619 0.110619 0.124378 0 0 0 0 g 0 0 0 0 0 0 42.7557 99.6681 99.6681 99.6681 0.110619 99.6681 66.4823 49.8756 0 0 0 0 t 0 0 0 0 0 0 28.5511 0.110619 0.110619 0.110619 0.110619 0.110619 33.2965 0.124378 0 0 0 0
M01919_2.00_shift6 (M01919_2.00)				; oligos_6nt_mkv4_m1 versus M01919_2.00; m=19/23; ncol2=7; w=-1; offset=-1; strand=D; shift=6; score=0.426674; ------tyasCGg----- ; cor=; Ncor= a 0 0 0 0 0 0 24.0571 23.1338 33.9485 12.3203 0.0637745 2.27505 16.5154 0 0 0 0 0 c 0 0 0 0 0 0 24.7897 26.3454 22.7563 31.5398 98.2581 0.00291467 13.254 0 0 0 0 0 g 0 0 0 0 0 0 24.2988 20.5178 21.4311 37.76 0.000141614 97.7099 45.3448 0 0 0 0 0 t 0 0 0 0 0 0 26.8544 30.0029 21.8641 18.3798 1.67799 0.0121795 24.8858 0 0 0 0 0
M08873_2.00_rc_shift0 (SP4_rc)				; oligos_6nt_mkv4_m1 versus M08873_2.00_rc (SP4_rc); m=20/23; ncol2=20; w=-7; offset=-7; strand=R; shift=0; score=0.420824; grgmargrGGCGGrGccr ; cor=; Ncor= a 22.2445 26.6533 14.0281 40.481 52.7054 34.6693 23.0461 34.2685 6.81363 3.60721 12.4248 5.61122 5.41082 35.2705 21.4429 19.8397 24.8497 32.6653 c 24.8497 14.8297 18.0361 25.0501 11.2224 2.60521 1.80361 2.00401 1.2024 0.400802 76.9539 1.60321 1.80361 3.00601 1.002 59.7194 41.483 7.81563 g 45.491 46.2926 60.521 24.8497 22.4449 54.9098 63.7275 61.523 90.1804 93.5872 1.002 85.5711 86.1723 56.7134 74.7495 14.2285 12.4248 36.4729 t 7.41483 12.2244 7.41483 9.61924 13.6273 7.81563 11.4228 2.20441 1.80361 2.40481 9.61924 7.21443 6.61323 5.01002 2.80561 6.21242 21.2425 23.0461
M08975_2.00_rc_shift0 (M08975_2.00_rc)				; oligos_6nt_mkv4_m1 versus M08975_2.00_rc; m=21/23; ncol2=20; w=-7; offset=-7; strand=R; shift=0; score=0.420824; grgmargrGGCGGrGccr ; cor=; Ncor= a 22.2445 26.6533 14.0281 40.481 52.7054 34.6693 23.0461 34.2685 6.81363 3.60721 12.4248 5.61122 5.41082 35.2705 21.4429 19.8397 24.8497 32.6653 c 24.8497 14.8297 18.0361 25.0501 11.2224 2.60521 1.80361 2.00401 1.2024 0.400802 76.9539 1.60321 1.80361 3.00601 1.002 59.7194 41.483 7.81563 g 45.491 46.2926 60.521 24.8497 22.4449 54.9098 63.7275 61.523 90.1804 93.5872 1.002 85.5711 86.1723 56.7134 74.7495 14.2285 12.4248 36.4729 t 7.41483 12.2244 7.41483 9.61924 13.6273 7.81563 11.4228 2.20441 1.80361 2.40481 9.61924 7.21443 6.61323 5.01002 2.80561 6.21242 21.2425 23.0461
M08954_2.00_rc_shift11 (ZBTB14_rc)				; oligos_6nt_mkv4_m1 versus M08954_2.00_rc (ZBTB14_rc); m=22/23; ncol2=9; w=0; offset=4; strand=R; shift=11; score=0.41039; -----------gGwGCGC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 17.6715 9.35551 67.5676 2.4948 1.0395 1.2474 7.69231 c 0 0 0 0 0 0 0 0 0 0 0 19.5426 9.77131 0 1.0395 96.8815 0.4158 91.8919 g 0 0 0 0 0 0 0 0 0 0 0 48.8565 77.9626 0.2079 95.0104 1.4553 97.2973 0.2079 t 0 0 0 0 0 0 0 0 0 0 0 13.9293 2.9106 32.2245 1.4553 0.623701 1.0395 0.2079
M02541_2.00_shift6 (M02541_2.00)				; oligos_6nt_mkv4_m1 versus M02541_2.00; m=23/23; ncol2=8; w=-1; offset=-1; strand=D; shift=6; score=0.409065; ------CCCGCGGG---- ; cor=; Ncor= a 0 0 0 0 0 0 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0 0 0 0 c 0 0 0 0 0 0 97.1154 97.1154 97.1154 0.961538 97.1154 0.961538 0.961538 0.961538 0 0 0 0 g 0 0 0 0 0 0 0.961538 0.961538 0.961538 97.1154 0.961538 97.1154 97.1154 97.1154 0 0 0 0 t 0 0 0 0 0 0 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0.961538 0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
positions_7nt_m5_shift3 (positions_7nt_m5)				; positions_7nt_m5; m=0 (reference); ncol1=12; shift=3; ncol=15; ---ssGTGCGCACss ; Alignment reference a 0 0 0 1191 1096 128 207 178 222 465 51 4928 56 1488 724 c 0 0 0 1944 1843 270 705 139 5164 373 5856 384 5770 1797 2365 g 0 0 0 2365 1797 5770 384 5856 373 5164 139 705 270 1843 1944 t 0 0 0 724 1488 56 4928 51 465 222 178 207 128 1096 1191
M00136_2.00_shift4 (M00136_2.00)				; positions_7nt_m5 versus M00136_2.00; m=1/11; ncol2=9; w=0; offset=1; strand=D; shift=4; score=0.640439; ----CGTGyGCAm-- ; cor=; Ncor= a 0 0 0 0 0.490196 0.247525 0.247525 0.247525 0.247525 0.247525 0.247525 99.2574 49.5098 0 0 c 0 0 0 0 98.5294 0.247525 0.247525 0.247525 49.7525 0.247525 99.2574 0.247525 49.5098 0 0 g 0 0 0 0 0.490196 99.2574 0.247525 99.2574 0.247525 99.2574 0.247525 0.247525 0.490196 0 0 t 0 0 0 0 0.490196 0.247525 99.2574 0.247525 49.7525 0.247525 0.247525 0.247525 0.490196 0 0
M08954_2.00_shift5 (ZBTB14)				; positions_7nt_m5 versus M08954_2.00 (ZBTB14); m=2/11; ncol2=9; w=0; offset=2; strand=D; shift=5; score=0.559261; -----GCGCGCwCc- ; cor=; Ncor= a 0 0 0 0 0 8.93971 0.2079 0.2079 1.0395 0.623701 1.4553 32.2245 2.9106 13.9293 0 c 0 0 0 0 0 9.77131 97.921 0.2079 97.2973 1.4553 95.0104 0.2079 77.9626 48.8565 0 g 0 0 0 0 0 75.8836 0.831601 91.8919 0.4158 96.8815 1.0395 0 9.77131 19.5426 0 t 0 0 0 0 0 5.40541 1.0395 7.69231 1.2474 1.0395 2.4948 67.5676 9.35551 17.6715 0
M04696_2.00_shift5 (E2F2)				; positions_7nt_m5 versus M04696_2.00 (E2F2); m=3/11; ncol2=11; w=0; offset=2; strand=D; shift=5; score=0.55435; -----GCGCGCGCgy ; cor=; Ncor= a 0 0 0 0 0 0.657829 2.03349 2.1097 0.595179 0.375101 0.091818 2.46262 0.665273 10.9302 6.57546 c 0 0 0 0 0 0.30898 89.3633 0.29134 96.3396 0.932685 99.0818 1.17268 92.3018 18.4499 32.2595 g 0 0 0 0 0 96.8006 3.91976 97.5688 1.52763 98.459 0.122424 94.9086 5.38871 62.2604 7.70521 t 0 0 0 0 0 2.23263 4.68347 0.0301386 1.53755 0.233171 0.703938 1.45607 1.64417 8.35951 53.4598
M08387_2.00_shift5 (ZBTB14)				; positions_7nt_m5 versus M08387_2.00 (ZBTB14); m=4/11; ncol2=9; w=0; offset=2; strand=D; shift=5; score=0.545112; -----sCGCGCsCc- ; cor=; Ncor= a 0 0 0 0 0 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 12.6972 0.0788644 12.3817 0 c 0 0 0 0 0 36.6719 99.7634 0.0788644 99.7634 0.0788644 99.7634 37.6183 99.7634 57.1767 0 g 0 0 0 0 0 57.4921 0.0788644 99.7634 0.0788644 99.7634 0.0788644 49.6057 0.0788644 20.2681 0 t 0 0 0 0 0 5.7571 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 0.0788644 10.1735 0
M00336_2.00_rc_shift5 (PAX6_rc)				; positions_7nt_m5 versus M00336_2.00_rc (PAX6_rc); m=5/11; ncol2=8; w=0; offset=2; strand=R; shift=5; score=0.544251; -----GTGTGCAY-- ; cor=; Ncor= a 0 0 0 0 0 22.2345 6.71543 0.0664894 0.0664894 0.0664894 0.0664894 99.8005 0.0766871 0 0 c 0 0 0 0 0 0.110619 0.0664894 0.0664894 6.71543 0.0664894 99.8005 0.0664894 69.0951 0 0 g 0 0 0 0 0 77.5442 13.3644 99.8005 0.0664894 99.8005 0.0664894 0.0664894 0.0766871 0 0 t 0 0 0 0 0 0.110619 79.8537 0.0664894 93.1516 0.0664894 0.0664894 0.0664894 30.7515 0 0
M08981_2.00_rc_shift2 (M08981_2.00_rc)				; positions_7nt_m5 versus M08981_2.00_rc; m=6/11; ncol2=17; w=-1; offset=-1; strand=R; shift=2; score=0.510494; --syktTGCrCACGg ; cor=; Ncor= a 0 0 13.3242 19.2308 4.3956 16.4835 0 2.47253 0 67.3077 0 75 0 4.3956 19.7802 c 0 0 31.1813 29.3956 5.21978 17.8571 0 0 100 0 97.2527 12.9121 100 2.47253 4.3956 g 0 0 43.544 10.4396 27.1978 12.3626 0 97.5275 0 32.6923 2.74725 2.47253 0 84.6154 54.1209 t 0 0 11.9505 40.9341 63.1868 53.2967 100 0 0 0 0 9.61538 0 8.51648 21.7033
M08942_2.00_rc_shift2 (MTF1_rc)				; positions_7nt_m5 versus M08942_2.00_rc (MTF1_rc); m=7/11; ncol2=17; w=-1; offset=-1; strand=R; shift=2; score=0.510494; --syktTGCrCACGg ; cor=; Ncor= a 0 0 13.3242 19.2308 4.3956 16.4835 0 2.47253 0 67.3077 0 75 0 4.3956 19.7802 c 0 0 31.1813 29.3956 5.21978 17.8571 0 0 100 0 97.2527 12.9121 100 2.47253 4.3956 g 0 0 43.544 10.4396 27.1978 12.3626 0 97.5275 0 32.6923 2.74725 2.47253 0 84.6154 54.1209 t 0 0 11.9505 40.9341 63.1868 53.2967 100 0 0 0 0 9.61538 0 8.51648 21.7033
M09525_2.00_rc_shift3 (TFDP2,TFDP3_rc)				; positions_7nt_m5 versus M09525_2.00_rc (TFDP2,TFDP3_rc); m=8/11; ncol2=8; w=0; offset=0; strand=R; shift=3; score=0.503622; ---wrgCGCGC---- ; cor=; Ncor= a 0 0 0 29.7 48.7 23.6 19.8 0.1 0.1 8.2 0.3 0 0 0 0 c 0 0 0 0.1 11.3 0.1 70 0.1 99.7 0.1 76.1 0 0 0 0 g 0 0 0 15.1 25.7 66.4 0.1 99.7 0.1 91.6 3.4 0 0 0 0 t 0 0 0 55.1 14.3 9.9 10.1 0.1 0.1 0.1 20.2 0 0 0 0
M08177_2.00_shift1 (NRF1)				; positions_7nt_m5 versus M08177_2.00 (NRF1); m=9/11; ncol2=11; w=-2; offset=-2; strand=D; shift=1; score=0.502295; -GCGCmTGCGCr--- ; cor=; Ncor= a 0 13.019 13.4732 4.23875 0 32.7422 0 0 0 0 1.60035 48.551 0 0 0 c 0 8.10986 86.5268 4.08737 86.8512 40.2682 8.7154 0 93.8149 7.54758 98.3997 17.3875 0 0 0 g 0 78.8711 0 91.6739 10.1211 20.2206 11.4187 100 0 92.4524 0 34.0614 0 0 0 t 0 0 0 0 3.02768 6.76903 79.8659 0 6.18512 0 0 0 0 0 0
M01964_2.00_shift2 (M01964_2.00)				; positions_7nt_m5 versus M01964_2.00; m=10/11; ncol2=10; w=-1; offset=-1; strand=D; shift=2; score=0.494419; --agsGCGCGCg--- ; cor=; Ncor= a 0 0 31.8805 19.3453 9.92319 0.0135428 0.0135428 0.0135428 0.0135428 0.0135428 23.0338 24.2693 0 0 0 c 0 0 22.7065 17.8255 60.0146 0.0135428 99.9594 0.0135428 99.9594 20.2501 72.3521 24.6407 0 0 0 g 0 0 22.7065 40.2863 30.0486 99.9594 0.0135428 99.9594 0.0135428 79.7228 2.30703 26.3382 0 0 0 t 0 0 22.7065 22.5428 0.0135428 0.0135428 0.0135428 0.0135428 0.0135428 0.0135428 2.30703 24.7518 0 0 0
M04698_2.00_shift0 (E2F2)				; positions_7nt_m5 versus M04698_2.00 (E2F2); m=11/11; ncol2=11; w=-3; offset=-3; strand=D; shift=0; score=0.424062; sGkGsGcGCGC---- ; cor=; Ncor= a 11.3372 0 12.2294 3.82775 2.82686 2.18579 8.95522 4 8.26772 0 1.67598 0 0 0 0 c 36.6279 2.18579 19.3723 10.5263 63.2509 0 66.791 6.5 70.4724 2.18579 70.9497 0 0 0 0 g 44.7674 97.8142 42.6407 85.6459 25.4417 97.8142 11.9403 89.5 11.0236 97.8142 22.905 0 0 0 0 t 7.26744 0 25.7576 0 8.48057 0 12.3134 0 10.2362 0 4.46927 0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
positions_7nt_m4_shift2 (positions_7nt_m4)				; positions_7nt_m4; m=0 (reference); ncol1=12; shift=2; ncol=14; --sgGGTGCACCcs ; Alignment reference a 0 0 922 1241 118 104 282 59 136 4261 72 259 992 993 c 0 0 1770 1137 165 470 289 183 4930 476 4662 4766 1938 1623 g 0 0 1623 1938 4766 4662 476 4930 183 289 470 165 1137 1770 t 0 0 993 992 259 72 4261 136 59 282 104 118 1241 922
M04386_2.00_shift4 (ZNF263)				; positions_7nt_m4 versus M04386_2.00 (ZNF263); m=1/25; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.601191; ----vGTsCTCCCy ; cor=; Ncor= a 0 0 0 0 29.7705 4.34783 0 3.37328 3.93013 2.36613 0 0.455433 10.6842 14.6885 c 0 0 0 0 36.7869 7.37986 2.98982 27.2526 95.1341 2.67746 96.764 99.2193 80.2632 32.6557 g 0 0 0 0 25.9016 87.2426 0 67.6875 0 0 0 0.325309 2.78947 20.9836 t 0 0 0 0 7.54098 1.02975 97.0102 1.68664 0.935745 94.9564 3.23604 0 6.26316 31.6721
M04387_2.00_rc_shift2 (ZNF263_rc)				; positions_7nt_m4 versus M04387_2.00_rc (ZNF263_rc); m=2/25; ncol2=10; w=0; offset=0; strand=R; shift=2; score=0.600109; --rGGGAGsACs-- ; cor=; Ncor= a 0 0 31.8725 8.33674 1.97198 0 92.5711 2.11752 1.07362 94.2091 1.97505 7.11845 0 0 c 0 0 13.0336 2.86065 2.02387 2.31916 0 2.17046 67.3696 0 91.3202 25.8542 0 0 g 0 0 34.5475 71.8022 91.178 97.0182 5.79557 93.0122 28.9494 5.79088 3.69023 45.1025 0 0 t 0 0 20.5464 17.0004 4.82615 0.662617 1.6333 2.69984 2.60736 0 3.01455 21.9248 0 0
M07771_2.00_shift0 (ZNF674)				; positions_7nt_m4 versus M07771_2.00 (ZNF674); m=3/25; ncol2=12; w=-2; offset=-2; strand=D; shift=0; score=0.563004; yybTGGyGCyCC-- ; cor=; Ncor= a 12.199 5.87798 2.36354 0.110765 13.5452 0.110765 0.554338 0.110765 13.8641 5.53264 0.554338 0.110765 0 0 c 35.2387 29.5329 35.6007 24.7289 0.110765 0.110765 34.2515 0.110765 68.6299 37.9346 97.4519 99.6677 0 0 g 22.7491 10.3032 31.247 0.110765 82.2454 86.8 15.4207 98.3184 12.9648 0.110765 0.110765 0.110765 0 0 t 29.8132 54.286 30.7888 75.0495 4.09859 12.9784 49.7735 1.46003 4.54126 56.4219 1.88301 0.110765 0 0
M07732_2.00_shift3 (ZNF790)				; positions_7nt_m4 versus M07732_2.00 (ZNF790); m=4/25; ncol2=8; w=0; offset=1; strand=D; shift=3; score=0.551032; ---TGCTGCAC--- ; cor=; Ncor= a 0 0 0 0 2.7027 0 0 0 0 91.8919 0 0 0 0 c 0 0 0 2.7027 0 81.0811 0 0 100 0 100 0 0 0 g 0 0 0 16.2162 97.2973 18.9189 0 100 0 8.1081 0 0 0 0 t 0 0 0 81.0811 0 0 100 0 0 0 0 0 0 0
M00336_2.00_rc_shift3 (PAX6_rc)				; positions_7nt_m4 versus M00336_2.00_rc (PAX6_rc); m=5/25; ncol2=8; w=0; offset=1; strand=R; shift=3; score=0.541251; ---GTGTGCAY--- ; cor=; Ncor= a 0 0 0 22.2345 6.71543 0.0664894 0.0664894 0.0664894 0.0664894 99.8005 0.0766871 0 0 0 c 0 0 0 0.110619 0.0664894 0.0664894 6.71543 0.0664894 99.8005 0.0664894 69.0951 0 0 0 g 0 0 0 77.5442 13.3644 99.8005 0.0664894 99.8005 0.0664894 0.0664894 0.0766871 0 0 0 t 0 0 0 0.110619 79.8537 0.0664894 93.1516 0.0664894 0.0664894 0.0664894 30.7515 0 0 0
M00766_2.00_rc_shift3 (M00766_2.00_rc)				; positions_7nt_m4 versus M00766_2.00_rc; m=6/25; ncol2=8; w=0; offset=1; strand=R; shift=3; score=0.495915; ---gGGAGsAC--- ; cor=; Ncor= a 0 0 0 15 3.84615 3.57143 89.2857 3.57143 3.57143 89.2857 4.54545 0 0 0 c 0 0 0 15 3.84615 3.57143 3.57143 3.57143 53.5714 3.57143 81.8182 0 0 0 g 0 0 0 60 80.7692 89.2857 3.57143 71.4286 39.2857 3.57143 9.09091 0 0 0 t 0 0 0 10 11.5385 3.57143 3.57143 21.4286 3.57143 3.57143 4.54545 0 0 0
M00142_2.00_rc_shift3 (ZNF691_rc)				; positions_7nt_m4 versus M00142_2.00_rc (ZNF691_rc); m=7/25; ncol2=8; w=0; offset=1; strand=R; shift=3; score=0.479875; ---rkGAGyAC--- ; cor=; Ncor= a 0 0 0 51.6489 8.14737 1.89551 97.1426 0.952471 0 79.1865 5.49014 0 0 0 c 0 0 0 10.01 12.7964 0.0094304 0.952471 0.0094304 64.7468 18.8143 89.006 0 0 0 g 0 0 0 28.3311 52.3129 98.0856 1.89551 97.1426 0.961538 0.00989707 1.3828 0 0 0 t 0 0 0 10.01 26.7434 0.0094304 0.0094304 1.89551 34.2822 1.98931 4.12103 0 0 0
M04392_2.00_rc_shift0 (SNAI2_rc)				; positions_7nt_m4 versus M04392_2.00_rc (SNAI2_rc); m=8/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.475413; rrCAGGTGCA---- ; cor=; Ncor= a 42.7063 62.5998 0 100 0 0.190442 0.023777 0 0 68.0061 0 0 0 0 c 8.96947 0 100 0 0 0 0.0772752 0 79.4015 3.94167 0 0 0 0 g 35.8361 32.3761 0 0 100 99.7917 0.225881 100 0 23.9186 0 0 0 0 t 12.4881 5.02407 0 0 0 0.017854 99.6731 0 20.5985 4.13355 0 0 0 0
M08775_2.00_shift6 (M08775_2.00)				; positions_7nt_m4 versus M08775_2.00; m=9/25; ncol2=9; w=0; offset=4; strand=D; shift=6; score=0.47529; ------yrCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 19.9921 31.573 0 99.884 0 0 0 0 c 0 0 0 0 0 0 34.674 0 100 0.11602 100 100 0 0 g 0 0 0 0 0 0 8.0382 65.935 0 0 0 0 0 100 t 0 0 0 0 0 0 37.2957 2.49199 0 0 0 0 100 0
M04443_2.00_rc_shift0 (SNAI1_rc)				; positions_7nt_m4 versus M04443_2.00_rc (SNAI1_rc); m=10/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.47274; arCAGGTGcA---- ; cor=; Ncor= a 47.7129 45.2762 1.84936 97.7416 1.39111 0.0937427 0.526617 0.98711 2.46875 68.6642 0 0 0 0 c 13.0307 0.617352 95.5615 0 0.866591 0 0 0 66.6094 6.36336 0 0 0 0 g 24.1379 48.7267 1.73728 1.45592 97.2178 99.9063 1.86606 99.0129 8.21094 16.7752 0 0 0 0 t 15.1185 5.37978 0.851827 0.802476 0.524515 0 97.6073 0 22.7109 8.19721 0 0 0 0
M04394_2.00_rc_shift0 (SNAI2_rc)				; positions_7nt_m4 versus M04394_2.00_rc (SNAI2_rc); m=11/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.46398; rrCAGGTGCa---- ; cor=; Ncor= a 41.7209 61.9346 0 99.9118 1.92227 0 0 0.413835 2.72069 60.9233 0 0 0 0 c 10.748 0.435455 100 0.0579491 0 0.0126072 0 0.0376213 68.1978 7.1332 0 0 0 0 g 34.9952 32.4259 0 0 97.9789 99.9874 0.0378119 99.4583 8.03481 24.5091 0 0 0 0 t 12.5359 5.20405 0 0.0302343 0.0988313 0 99.9622 0.0902912 21.0467 7.43432 0 0 0 0
M04607_2.00_shift6 (SNAI3)				; positions_7nt_m4 versus M04607_2.00 (SNAI3); m=12/25; ncol2=10; w=0; offset=4; strand=D; shift=6; score= 0.4531; ------trCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 7.38318 27.3869 0.47081 99.3639 0 0.667909 0.0477327 0.555027 c 0 0 0 0 0 0 20.9479 14.7375 98.054 0.445293 99.7127 97.0488 0.540971 0 g 0 0 0 0 0 0 9.18558 54.1327 0 0.19084 0.287265 0.45045 0 99.0802 t 0 0 0 0 0 0 62.4833 3.74285 1.4752 0 0 1.83287 99.4113 0.364732
M08973_2.00_shift5 (M08973_2.00)				; positions_7nt_m4 versus M08973_2.00; m=13/25; ncol2=11; w=0; offset=3; strand=D; shift=5; score=0.452543; -----mtgCACCTG ; cor=; Ncor= a 0 0 0 0 0 36.4372 19.6356 21.4575 0.404858 99.7976 0 0 0 0.202429 c 0 0 0 0 0 30.5668 20.8502 15.3846 99.5951 0 99.7976 99.7976 0 0 g 0 0 0 0 0 21.6599 23.8866 60.5263 0 0 0 0 0 99.7976 t 0 0 0 0 0 11.336 35.6275 2.63158 0 0.202429 0.202429 0.202429 100 0
M04393_2.00_rc_shift0 (SNAI2_rc)				; positions_7nt_m4 versus M04393_2.00_rc (SNAI2_rc); m=14/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.452461; rrCAGGTGcr---- ; cor=; Ncor= a 37.8363 53.9334 0 100 1.10288 0 0 0 2.69082 48.6089 0 0 0 0 c 13.0222 0.117782 100 0 0 0 0 0 65.6645 9.09527 0 0 0 0 g 32.4109 38.912 0 0 98.8971 100 0.0501283 100 7.14839 32.754 0 0 0 0 t 16.7306 7.03681 0 0 0 0 99.9499 0 24.4963 9.54176 0 0 0 0
M02728_2.00_rc_shift2 (TCF4_rc)				; positions_7nt_m4 versus M02728_2.00_rc (TCF4_rc); m=15/25; ncol2=7; w=0; offset=0; strand=R; shift=2; score=0.447703; --CAGGTGy----- ; cor=; Ncor= a 0 0 0.647821 98.3422 0.0574053 2.40128 0.2936 0.298507 2.85714 0 0 0 0 0 c 0 0 97.821 0.236827 3.90356 8.96478 0.998238 0 47.9365 0 0 0 0 0 g 0 0 0.294464 0.769686 95.3502 88.6339 1.1744 99.1642 9.66811 0 0 0 0 0 t 0 0 1.23675 0.651273 0.688863 0 97.5338 0.537313 39.5382 0 0 0 0 0
M04444_2.00_shift6 (SNAI1)				; positions_7nt_m4 versus M04444_2.00 (SNAI1); m=16/25; ncol2=10; w=0; offset=4; strand=D; shift=6; score=0.446918; ------yGCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 5.98876 19.479 0.134373 100 0 0.0322103 0.0460193 0.00657505 c 0 0 0 0 0 0 46.6276 9.42949 99.6592 0 100 97.945 0 0.0263002 g 0 0 0 0 0 0 4.56805 69.3091 0 0 0 0.0805257 0 99.9671 t 0 0 0 0 0 0 42.8155 1.78242 0.206476 0 0 1.94228 99.954 0
M04608_2.00_rc_shift0 (SNAI3_rc)				; positions_7nt_m4 versus M04608_2.00_rc (SNAI3_rc); m=17/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.444579; rrCAGGTGyr---- ; cor=; Ncor= a 43.1493 55.3369 0.806723 99.8979 2.20903 0.102145 0.168124 1.9385 2.8208 54.0541 0 0 0 0 c 12.0654 0.333556 98.6218 0 1.05506 0 0 0 54.0929 5.86092 0 0 0 0 g 28.8344 42.5284 0.571429 0 96.7359 99.8979 1.17687 98.0615 17.1091 35.044 0 0 0 0 t 15.9509 1.8012 0 0.102145 0 0 98.655 0 25.9771 5.041 0 0 0 0
M04442_2.00_shift6 (SNAI1)				; positions_7nt_m4 versus M04442_2.00 (SNAI1); m=18/25; ncol2=10; w=0; offset=4; strand=D; shift=6; score=0.438068; ------yrCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 13.8336 26.2356 0 100 0 0 0 0 c 0 0 0 0 0 0 35.0855 11.9189 100 0 100 99.5913 0 0 g 0 0 0 0 0 0 13.6551 59.4683 0 0 0 0 0 100 t 0 0 0 0 0 0 37.4258 2.37716 0 0 0 0.408703 100 0
M08853_2.00_rc_shift0 (SNAI2_rc)				; positions_7nt_m4 versus M08853_2.00_rc (SNAI2_rc); m=19/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.437035; rrCAGGTGca---- ; cor=; Ncor= a 40 43 0.2 100 0 0 0 0 0.4 37.4 0 0 0 0 c 7.2 0.4 99.8 0 0 0 0 0 56.2 23.2 0 0 0 0 g 42.6 56.4 0 0 100 100 0 99.4 21 18.8 0 0 0 0 t 10.2 0.2 0 0 0 0 100 0.6 22.4 20.6 0 0 0 0
M04395_2.00_rc_shift0 (SNAI2_rc)				; positions_7nt_m4 versus M04395_2.00_rc (SNAI2_rc); m=20/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.433513; rrCAGGTGcr---- ; cor=; Ncor= a 34.6441 46.5531 0 100 3.56037 0 0 0.512821 3.74194 37.6205 0 0 0 0 c 13.6662 0.264692 100 0 0 0 0 0 59.0645 7.87723 0 0 0 0 g 34.93 46.0207 0 0 96.3684 100 0 99.1464 13.0474 45.5218 0 0 0 0 t 16.7598 7.16155 0 0 0.0712074 0 100 0.340819 24.1461 8.98042 0 0 0 0
M10091_2.00_shift5 (ZEB1)				; positions_7nt_m4 versus M10091_2.00 (ZEB1); m=21/25; ncol2=12; w=0; offset=3; strand=D; shift=5; score=0.425348; -----vyrCACCTG ; cor=; Ncor= a 0 0 0 0 0 25 8.33333 41.6667 0 100 0 0 0 0 c 0 0 0 0 0 41.6667 33.3333 0 100 0 91.6667 91.6667 0 0 g 0 0 0 0 0 33.3333 16.6667 58.3333 0 0 0 8.33333 0 100 t 0 0 0 0 0 0 41.6667 0 0 0 8.33333 0 100 0
M04441_2.00_rc_shift0 (SNAI1_rc)				; positions_7nt_m4 versus M04441_2.00_rc (SNAI1_rc); m=22/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.413973; drCAGGTGyr---- ; cor=; Ncor= a 26.3924 29.1363 2.11947 95.4341 7.8242 0.358441 0.189413 3.36206 6.08683 32.6156 0 0 0 0 c 15.9486 2.08741 94.9579 1.41847 2.29055 0.0248917 0 0 40.6209 14.8464 0 0 0 0 g 32.0773 54.1186 1.30685 0.434616 88.5295 99.4773 0.209351 95.1569 19.7051 31.9884 0 0 0 0 t 25.5817 14.6577 1.61574 2.71277 1.35572 0.139394 99.6012 1.48102 33.5871 20.5496 0 0 0 0
M02807_2.00_rc_shift0 (TCF4_rc)				; positions_7nt_m4 versus M02807_2.00_rc (TCF4_rc); m=23/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.404063; wvCAGGTGyr---- ; cor=; Ncor= a 26.4568 30.986 0.122597 99.4279 0 5.56204 0 0.0638695 2.01121 25.4979 0 0 0 0 c 23.7915 31.0991 99.7205 0 1.86255 9.65227 0 0 47.4036 10.4647 0 0 0 0 g 23.6636 36.0757 0.0245194 0 97.8679 84.7857 0 99.9067 12.1214 40.7376 0 0 0 0 t 26.088 1.83919 0.132405 0.572071 0.269516 0 100 0.0294782 38.4638 23.2997 0 0 0 0
M02808_2.00_rc_shift0 (TCF4_rc)				; positions_7nt_m4 versus M02808_2.00_rc (TCF4_rc); m=24/25; ncol2=10; w=-2; offset=-2; strand=R; shift=0; score=0.403261; wrcAGGTGyd---- ; cor=; Ncor= a 27.2727 31.5047 14.9671 91.7986 7.80488 7.16216 18.5185 0 8.6478 25.5887 0 0 0 0 c 22.5705 24.7649 52.4671 0 4.7561 6.62162 0.83632 5.83215 31.4465 12.7159 0 0 0 0 g 19.279 33.3856 24.2599 8.20144 77.8049 86.2162 4.42055 90.7539 19.1824 33.124 0 0 0 0 t 30.8777 10.3448 8.30592 0 9.63415 0 76.2246 3.41394 40.7233 28.5714 0 0 0 0
M02794_2.00_shift6 (MESP1)				; positions_7nt_m4 versus M02794_2.00 (MESP1); m=25/25; ncol2=10; w=0; offset=4; strand=D; shift=6; score=0.401311; ------hrCACCTG ; cor=; Ncor= a 0 0 0 0 0 0 40.2098 47.0383 0 88.5802 0 2.40964 0 0 c 0 0 0 0 0 0 25.5245 19.1638 100 11.4198 86.4458 86.4458 11.1455 9.28144 g 0 0 0 0 0 0 4.8951 31.7073 0 0 9.33735 4.51807 0 85.9281 t 0 0 0 0 0 0 29.3706 2.09059 0 0 4.21687 6.62651 88.8545 4.79042