| Matrix name | Aligned logos | cor |
Ncor |
Aligned matrices |
|---|
| oligos_7nt_mkv4_m2_shift4 (oligos_7nt_mkv4_m2) |
 |
  |
  |
; oligos_7nt_mkv4_m2; m=0 (reference); ncol1=12; shift=4; ncol=16; ----tgCCCAGACAtg
; Alignment reference
a 0 0 0 0 115 78 22 24 13 580 21 494 21 602 145 125
c 0 0 0 0 108 128 556 594 620 9 21 32 586 17 125 80
g 0 0 0 0 99 362 23 6 1 19 595 106 30 7 127 366
t 0 0 0 0 327 81 48 25 15 41 12 17 12 23 252 78
|
| MA1979.2_rc_shift4 (ZNF416_rc) |
 |
|
|
; oligos_7nt_mkv4_m2 versus MA1979.2_rc (ZNF416_rc); m=1/14; ncol2=10; w=0; offset=0; strand=R; shift=4; score=0.73695; ----tGCCCAGAtA--
; cor=; Ncor=
a 0 0 0 0 66.0 18.0 3.0 3.0 2.0 336.0 3.0 254.0 46.0 240.0 0 0
c 0 0 0 0 29.0 3.0 341.0 335.0 335.0 1.0 7.0 15.0 77.0 26.0 0 0
g 0 0 0 0 38.0 320.0 1.0 5.0 7.0 6.0 334.0 28.0 25.0 32.0 0 0
t 0 0 0 0 212.0 4.0 0.0 2.0 1.0 2.0 1.0 48.0 197.0 47.0 0 0
|
| MA2121.1_shift5 (ZNF213) |
 |
|
|
; oligos_7nt_mkv4_m2 versus MA2121.1 (ZNF213); m=2/14; ncol2=12; w=0; offset=1; strand=D; shift=5; score=0.640537; -----gCCCAGGCwGs
; cor=; Ncor=
a 0 0 0 0 0 119.0 26.0 18.0 15.0 577.0 10.0 12.0 16.0 229.0 42.0 61.0
c 0 0 0 0 0 89.0 581.0 603.0 630.0 34.0 13.0 25.0 642.0 97.0 76.0 319.0
g 0 0 0 0 0 403.0 52.0 34.0 34.0 54.0 661.0 639.0 22.0 124.0 519.0 260.0
t 0 0 0 0 0 76.0 28.0 32.0 8.0 22.0 3.0 11.0 7.0 237.0 50.0 47.0
|
| MA2125.1_shift4 (Zfp809) |
 |
|
|
; oligos_7nt_mkv4_m2 versus MA2125.1 (Zfp809); m=3/14; ncol2=9; w=0; offset=0; strand=D; shift=4; score=0.571705; ----wTCCCAGCc---
; cor=; Ncor=
a 0 0 0 0 828.0 23.0 15.0 20.0 10.0 1529.0 32.0 287.0 217.0 0 0 0
c 0 0 0 0 66.0 41.0 1607.0 1610.0 1621.0 26.0 35.0 1218.0 1091.0 0 0 0
g 0 0 0 0 81.0 23.0 18.0 14.0 16.0 73.0 1572.0 99.0 115.0 0 0 0
t 0 0 0 0 690.0 1578.0 25.0 21.0 18.0 37.0 26.0 61.0 242.0 0 0 0
|
| MA0092.2_rc_shift4 (Hand1::Tcf3_rc) |
 |
|
|
; oligos_7nt_mkv4_m2 versus MA0092.2_rc (Hand1::Tcf3_rc); m=4/14; ncol2=9; w=0; offset=0; strand=R; shift=4; score= 0.5495; ----awkCCAGAy---
; cor=; Ncor=
a 0 0 0 0 16.0 10.0 5.0 1.0 0.0 29.0 1.0 24.0 4.0 0 0 0
c 0 0 0 0 4.0 3.0 1.0 25.0 29.0 0.0 0.0 1.0 15.0 0 0 0
g 0 0 0 0 4.0 0.0 14.0 3.0 0.0 0.0 28.0 2.0 0.0 0 0 0
t 0 0 0 0 5.0 16.0 9.0 0.0 0.0 0.0 0.0 2.0 10.0 0 0 0
|
| MA2123.1_shift6 (Hand1) |
 |
|
|
; oligos_7nt_mkv4_m2 versus MA2123.1 (Hand1); m=5/14; ncol2=9; w=0; offset=2; strand=D; shift=6; score=0.537978; ------tCCAGACCt-
; cor=; Ncor=
a 0 0 0 0 0 0 177.0 84.0 8.0 1016.0 8.0 908.0 28.0 40.0 153.0 0
c 0 0 0 0 0 0 128.0 850.0 1036.0 16.0 24.0 33.0 955.0 962.0 235.0 0
g 0 0 0 0 0 0 148.0 101.0 12.0 10.0 1016.0 104.0 46.0 46.0 61.0 0
t 0 0 0 0 0 0 609.0 27.0 6.0 20.0 14.0 17.0 33.0 14.0 613.0 0
|
| MA0155.1_rc_shift2 (INSM1_rc) |
 |
|
|
; oligos_7nt_mkv4_m2 versus MA0155.1_rc (INSM1_rc); m=6/14; ncol2=12; w=-2; offset=-2; strand=R; shift=2; score=0.523587; --ygmCCCCwkrCA--
; cor=; Ncor=
a 0 0 2.0 5.0 6.0 0.0 0.0 0.0 0.0 8.0 3.0 13.0 4.0 19.0 0 0
c 0 0 12.0 0.0 16.0 24.0 24.0 23.0 24.0 0.0 0.0 3.0 20.0 4.0 0 0
g 0 0 0.0 16.0 2.0 0.0 0.0 1.0 0.0 0.0 15.0 8.0 0.0 0.0 0 0
t 0 0 10.0 3.0 0.0 0.0 0.0 0.0 0.0 16.0 6.0 0.0 0.0 1.0 0 0
|
| MA1153.2_rc_shift7 (Smad4_rc) |
 |
|
|
; oligos_7nt_mkv4_m2 versus MA1153.2_rc (Smad4_rc); m=7/14; ncol2=7; w=0; offset=3; strand=R; shift=7; score=0.515258; -------CyAGACr--
; cor=; Ncor=
a 0 0 0 0 0 0 0 0.0 0.0 1000.0 0.0 1000.0 0.0 581.0 0 0
c 0 0 0 0 0 0 0 1000.0 404.0 0.0 0.0 0.0 1000.0 81.0 0 0
g 0 0 0 0 0 0 0 0.0 0.0 0.0 1000.0 0.0 0.0 250.0 0 0
t 0 0 0 0 0 0 0 0.0 596.0 0.0 0.0 0.0 0.0 88.0 0 0
|
| MA0106.3_shift0 (TP53) |
 |
|
|
; oligos_7nt_mkv4_m2 versus MA0106.3 (TP53); m=8/14; ncol2=18; w=-4; offset=-4; strand=D; shift=0; score=0.510222; rACATGyCcgGrCATG
; cor=; Ncor=
a 7544.0 10514.0 45.0 11931.0 1710.0 8.0 244.0 1228.0 1145.0 3851.0 3584.0 7104.0 0.0 12925.0 1825.0 327.0
c 1037.0 116.0 19689.0 204.0 374.0 2.0 12014.0 17286.0 11875.0 1474.0 756.0 26.0 19350.0 250.0 118.0 33.0
g 6563.0 2433.0 13.0 653.0 137.0 20393.0 109.0 417.0 2151.0 9954.0 17846.0 8821.0 4.0 157.0 89.0 20549.0
t 2268.0 735.0 837.0 739.0 18893.0 0.0 7106.0 2642.0 3774.0 2118.0 1546.0 190.0 1.0 1155.0 17864.0 68.0
|
| MA1964.2_shift7 (SMAD2) |
 |
|
|
; oligos_7nt_mkv4_m2 versus MA1964.2 (SMAD2); m=9/14; ncol2=6; w=0; offset=3; strand=D; shift=7; score=0.494778; -------CCAGAC---
; cor=; Ncor=
a 0 0 0 0 0 0 0 42.0 6.0 3447.0 7.0 3747.0 1.0 0 0 0
c 0 0 0 0 0 0 0 3610.0 3484.0 149.0 30.0 0.0 3757.0 0 0 0
g 0 0 0 0 0 0 0 86.0 171.0 154.0 3703.0 0.0 0.0 0 0 0
t 0 0 0 0 0 0 0 20.0 97.0 8.0 18.0 11.0 0.0 0 0 0
|
| MA1731.2_rc_shift8 (ZNF768_rc) |
 |
|
|
; oligos_7nt_mkv4_m2 versus MA1731.2_rc (ZNF768_rc); m=10/14; ncol2=9; w=0; offset=4; strand=R; shift=8; score=0.46407; --------CAGAGAgG
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 1.0 987.0 1.0 945.0 20.0 917.0 123.0 141.0
c 0 0 0 0 0 0 0 0 973.0 11.0 11.0 43.0 29.0 11.0 179.0 62.0
g 0 0 0 0 0 0 0 0 25.0 1.0 987.0 6.0 950.0 39.0 655.0 768.0
t 0 0 0 0 0 0 0 0 1.0 1.0 1.0 6.0 1.0 34.0 43.0 29.0
|
| MA0161.3_rc_shift4 (NFIC_rc) |
 |
|
|
; oligos_7nt_mkv4_m2 versus MA0161.3_rc (NFIC_rc); m=11/14; ncol2=7; w=0; offset=0; strand=R; shift=4; score=0.422108; ----TGCCAAG-----
; cor=; Ncor=
a 0 0 0 0 574.0 530.0 290.0 81.0 10745.0 10781.0 324.0 0 0 0 0 0
c 0 0 0 0 478.0 88.0 10973.0 11087.0 177.0 369.0 329.0 0 0 0 0 0
g 0 0 0 0 397.0 10725.0 121.0 129.0 333.0 303.0 10542.0 0 0 0 0 0
t 0 0 0 0 10158.0 264.0 223.0 310.0 352.0 154.0 412.0 0 0 0 0 0
|
| MA1986.2_shift3 (ZNF692) |
 |
|
|
; oligos_7nt_mkv4_m2 versus MA1986.2 (ZNF692); m=12/14; ncol2=8; w=-1; offset=-1; strand=D; shift=3; score=0.413506; ---gGGCCCAs-----
; cor=; Ncor=
a 0 0 0 1403.0 0.0 31.0 27.0 41.0 3.0 10535.0 852.0 0 0 0 0 0
c 0 0 0 1314.0 90.0 4.0 10689.0 10446.0 10545.0 0.0 4998.0 0 0 0 0 0
g 0 0 0 6833.0 10642.0 10684.0 7.0 241.0 176.0 210.0 3703.0 0 0 0 0 0
t 0 0 0 1195.0 13.0 26.0 22.0 17.0 21.0 0.0 1192.0 0 0 0 0 0
|
| MA2002.2_shift7 (Zfp335) |
 |
|
|
; oligos_7nt_mkv4_m2 versus MA2002.2 (Zfp335); m=13/14; ncol2=7; w=0; offset=3; strand=D; shift=7; score=0.409952; -------tCAGGCA--
; cor=; Ncor=
a 0 0 0 0 0 0 0 12.0 2.0 78.0 0.0 0.0 2.0 72.0 0 0
c 0 0 0 0 0 0 0 5.0 82.0 3.0 2.0 0.0 81.0 1.0 0 0
g 0 0 0 0 0 0 0 15.0 0.0 0.0 81.0 82.0 1.0 10.0 0 0
t 0 0 0 0 0 0 0 52.0 0.0 3.0 1.0 2.0 0.0 1.0 0 0
|
| MA1116.2_rc_shift4 (RBPJ_rc) |
 |
|
|
; oligos_7nt_mkv4_m2 versus MA1116.2_rc (RBPJ_rc); m=14/14; ncol2=6; w=0; offset=0; strand=R; shift=4; score=0.405779; ----TTCCCA------
; cor=; Ncor=
a 0 0 0 0 4.0 29.0 78.0 60.0 1.0 2386.0 0 0 0 0 0 0
c 0 0 0 0 1.0 4.0 2309.0 2313.0 2341.0 2.0 0 0 0 0 0 0
g 0 0 0 0 15.0 0.0 8.0 20.0 25.0 12.0 0 0 0 0 0 0
t 0 0 0 0 2382.0 2369.0 7.0 9.0 35.0 2.0 0 0 0 0 0 0
|