One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.052000_2026-01-05.052000_2qIqyX/results/discovered_motifs/oligos_7nt_mkv4_m4/peak-motifs_oligos_7nt_mkv4_m4.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.052000_2026-01-05.052000_2qIqyX/results/discovered_motifs/oligos_7nt_mkv4_m4/peak-motifs_oligos_7nt_mkv4_m4_vs_db_JASPAR2024_CORE_vertebrates_non-redundant

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv4_m4_shift1 ; 19 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv4_m4_shift1 (oligos_7nt_mkv4_m4)
; oligos_7nt_mkv4_m4; m=0 (reference); ncol1=11; shift=1; ncol=12; -grCAaGCCCrs ; Alignment reference a 0 92 199 5 420 302 5 7 6 4 148 59 c 0 91 100 447 33 35 11 443 450 461 102 137 g 0 211 127 17 17 23 451 10 16 5 144 222 t 0 83 51 8 7 117 10 17 5 7 83 59

MA0746.3_shift1 (SP3)
; oligos_7nt_mkv4_m4 versus MA0746.3 (SP3); m=1/18; ncol2=11; w=0; offset=0; strand=D; shift=1; score=0.744977; -rCCACGCCCmC ; cor=; Ncor= a 0 2146.0 664.0 160.0 5253.0 6.0 465.0 0.0 0.0 2.0 3430.0 556.0 c 0 531.0 6591.0 6591.0 1338.0 6591.0 0.0 6591.0 6591.0 6591.0 3160.0 5116.0 g 0 4445.0 226.0 54.0 2.0 0.0 6591.0 0.0 0.0 2.0 39.0 297.0 t 0 421.0 345.0 202.0 11.0 12.0 504.0 0.0 9.0 718.0 552.0 1475.0

MA0741.1_shift1 (KLF16)
; oligos_7nt_mkv4_m4 versus MA0741.1 (KLF16); m=2/18; ncol2=11; w=0; offset=0; strand=D; shift=1; score=0.728929; -gmCMCgCCCMC ; cor=; Ncor= a 0 666.0 901.0 62.0 1150.0 66.0 497.0 8.0 2.0 16.0 437.0 32.0 c 0 535.0 1612.0 1612.0 461.0 1612.0 173.0 1612.0 1612.0 1612.0 1175.0 1612.0 g 0 1612.0 77.0 6.0 32.0 17.0 1612.0 0.0 8.0 3.0 19.0 23.0 t 0 240.0 116.0 45.0 0.0 19.0 403.0 0.0 0.0 97.0 40.0 370.0

MA1599.2_shift0 (ZNF682)
; oligos_7nt_mkv4_m4 versus MA1599.2 (ZNF682); m=3/18; ncol2=11; w=-1; offset=-1; strand=D; shift=0; score=0.701491; GGCyAAGCCCC- ; cor=; Ncor= a 110.0 103.0 100.0 48.0 953.0 999.0 6.0 13.0 5.0 7.0 66.0 0 c 85.0 42.0 795.0 597.0 72.0 31.0 7.0 999.0 1033.0 1034.0 896.0 0 g 774.0 877.0 105.0 55.0 20.0 22.0 1038.0 13.0 9.0 10.0 32.0 0 t 89.0 36.0 58.0 358.0 13.0 6.0 7.0 33.0 11.0 7.0 64.0 0

MA1512.2_shift2 (KLF11)
; oligos_7nt_mkv4_m4 versus MA1512.2 (KLF11); m=4/18; ncol2=10; w=0; offset=1; strand=D; shift=2; score=0.681397; --cCACGCCCmC ; cor=; Ncor= a 0 0 2022.0 650.0 8655.0 0.0 2426.0 11.0 1.0 0.0 4689.0 581.0 c 0 0 5549.0 8662.0 1289.0 9142.0 52.0 9161.0 9166.0 8941.0 4226.0 8403.0 g 0 0 401.0 156.0 115.0 0.0 8291.0 18.0 20.0 4.0 69.0 358.0 t 0 0 1192.0 506.0 27.0 38.0 349.0 23.0 7.0 885.0 761.0 1281.0

MA1564.2_shift2 (SP9)
; oligos_7nt_mkv4_m4 versus MA1564.2 (SP9); m=5/18; ncol2=10; w=0; offset=1; strand=D; shift=2; score=0.664644; --cCmCGCCCmc ; cor=; Ncor= a 0 0 566.0 321.0 2451.0 2.0 211.0 22.0 0.0 39.0 1192.0 188.0 c 0 0 2451.0 2451.0 1127.0 2451.0 200.0 2451.0 2451.0 2451.0 1259.0 1863.0 g 0 0 309.0 113.0 56.0 17.0 2451.0 0.0 0.0 24.0 38.0 191.0 t 0 0 518.0 284.0 96.0 9.0 173.0 14.0 30.0 412.0 353.0 588.0

MA1517.2_shift2 (KLF6)
; oligos_7nt_mkv4_m4 versus MA1517.2 (KLF6); m=6/18; ncol2=9; w=0; offset=1; strand=D; shift=2; score=0.624835; --cCACRCCCm- ; cor=; Ncor= a 0 0 569.0 432.0 2192.0 0.0 1024.0 0.0 25.0 71.0 955.0 0 c 0 0 2192.0 2192.0 284.0 2192.0 0.0 2192.0 2192.0 2192.0 665.0 0 g 0 0 332.0 298.0 60.0 0.0 2192.0 0.0 60.0 12.0 52.0 0 t 0 0 219.0 140.0 60.0 24.0 0.0 0.0 0.0 64.0 520.0 0

MA0747.2_shift2 (SP8)
; oligos_7nt_mkv4_m4 versus MA0747.2 (SP8); m=7/18; ncol2=11; w=0; offset=1; strand=D; shift=2; score=0.621249; --mCACgCCCmC ; cor=; Ncor= a 0 0 54.0 25.0 133.0 7.0 25.0 5.0 2.0 0.0 90.0 13.0 c 0 0 113.0 167.0 33.0 167.0 37.0 167.0 167.0 167.0 77.0 167.0 g 0 0 0.0 0.0 1.0 1.0 167.0 6.0 3.0 4.0 6.0 21.0 t 0 0 4.0 13.0 2.0 5.0 39.0 2.0 0.0 15.0 3.0 39.0

MA1516.2_shift0 (KLF3)
; oligos_7nt_mkv4_m4 versus MA1516.2 (KLF3); m=8/18; ncol2=10; w=-1; offset=-1; strand=D; shift=0; score=0.57155; grCCrCGCCC-- ; cor=; Ncor= a 7717.0 24771.0 1442.0 298.0 26757.0 2261.0 4245.0 202.0 83.0 77.0 0 0 c 2655.0 615.0 43259.0 43259.0 707.0 43259.0 334.0 43259.0 43259.0 43259.0 0 0 g 26568.0 18489.0 1954.0 248.0 16503.0 21.0 43259.0 31.0 29.0 48.0 0 0 t 6319.0 207.0 705.0 335.0 419.0 1409.0 1212.0 0.0 0.0 1218.0 0 0

MA1515.2_shift2 (KLF2)
; oligos_7nt_mkv4_m4 versus MA1515.2 (KLF2); m=9/18; ncol2=8; w=0; offset=1; strand=D; shift=2; score=0.528756; --CCmCrCCC-- ; cor=; Ncor= a 0 0 741.0 403.0 4622.0 0.0 1702.0 0.0 128.0 68.0 0 0 c 0 0 4622.0 4622.0 2265.0 4622.0 274.0 4622.0 4622.0 4622.0 0 0 g 0 0 495.0 186.0 1060.0 0.0 2920.0 49.0 195.0 105.0 0 0 t 0 0 346.0 312.0 214.0 78.0 167.0 22.0 9.0 444.0 0 0

MA1656.2_shift4 (ZNF449)
; oligos_7nt_mkv4_m4 versus MA1656.2 (ZNF449); m=10/18; ncol2=10; w=0; offset=3; strand=D; shift=4; score=0.502888; ----aAGCCCAA ; cor=; Ncor= a 0 0 0 0 4135.0 6239.0 108.0 139.0 64.0 68.0 6851.0 6620.0 c 0 0 0 0 1759.0 582.0 92.0 7088.0 7540.0 7479.0 300.0 96.0 g 0 0 0 0 1463.0 224.0 7368.0 322.0 28.0 54.0 182.0 829.0 t 0 0 0 0 303.0 615.0 92.0 111.0 28.0 59.0 327.0 115.0

MA0106.3_shift1 (TP53)
; oligos_7nt_mkv4_m4 versus MA0106.3 (TP53); m=11/18; ncol2=18; w=0; offset=0; strand=D; shift=1; score=0.492575; -rACATGyCcgG ; cor=; Ncor= a 0 7544.0 10514.0 45.0 11931.0 1710.0 8.0 244.0 1228.0 1145.0 3851.0 3584.0 c 0 1037.0 116.0 19689.0 204.0 374.0 2.0 12014.0 17286.0 11875.0 1474.0 756.0 g 0 6563.0 2433.0 13.0 653.0 137.0 20393.0 109.0 417.0 2151.0 9954.0 17846.0 t 0 2268.0 735.0 837.0 739.0 18893.0 0.0 7106.0 2642.0 3774.0 2118.0 1546.0

MA0657.2_shift0 (KLF13)
; oligos_7nt_mkv4_m4 versus MA0657.2 (KLF13); m=12/18; ncol2=17; w=-1; offset=-1; strand=D; shift=0; score=0.488366; tRmCACGCCCCY ; cor=; Ncor= a 733.0 1891.0 496.0 75.0 2384.0 0.0 24.0 0.0 4.0 1.0 509.0 3.0 c 46.0 0.0 923.0 924.0 0.0 1353.0 2.0 1596.0 1469.0 1760.0 1766.0 638.0 g 796.0 4630.0 58.0 2.0 11.0 7.0 3028.0 0.0 0.0 0.0 0.0 3.0 t 1766.0 59.0 102.0 61.0 0.0 3.0 9.0 7.0 0.0 16.0 10.0 1403.0

MA0597.3_rc_shift5 (THAP1_rc)
; oligos_7nt_mkv4_m4 versus MA0597.3_rc (THAP1_rc); m=13/18; ncol2=8; w=0; offset=4; strand=R; shift=5; score=0.448651; -----TGCCCTg ; cor=; Ncor= a 0 0 0 0 0 11.0 115.0 78.0 62.0 71.0 8.0 341.0 c 0 0 0 0 0 172.0 104.0 4942.0 4893.0 4958.0 220.0 933.0 g 0 0 0 0 0 95.0 4861.0 67.0 183.0 127.0 219.0 3351.0 t 0 0 0 0 0 4900.0 98.0 91.0 40.0 22.0 4731.0 553.0

MA0738.2_shift4 (HIC2)
; oligos_7nt_mkv4_m4 versus MA0738.2 (HIC2); m=14/18; ncol2=6; w=0; offset=3; strand=D; shift=4; score=0.42076; ----rTGCCM-- ; cor=; Ncor= a 0 0 0 0 2606.0 0.0 494.0 23.0 435.0 1466.0 0 0 c 0 0 0 0 394.0 117.0 354.0 4891.0 4891.0 3425.0 0 0 g 0 0 0 0 2285.0 0.0 4891.0 14.0 0.0 0.0 0 0 t 0 0 0 0 367.0 4891.0 151.0 0.0 59.0 0.0 0 0

MA1979.2_rc_shift5 (ZNF416_rc)
; oligos_7nt_mkv4_m4 versus MA1979.2_rc (ZNF416_rc); m=15/18; ncol2=10; w=0; offset=4; strand=R; shift=5; score=0.418309; -----tGCCCAG ; cor=; Ncor= a 0 0 0 0 0 66.0 18.0 3.0 3.0 2.0 336.0 3.0 c 0 0 0 0 0 29.0 3.0 341.0 335.0 335.0 1.0 7.0 g 0 0 0 0 0 38.0 320.0 1.0 5.0 7.0 6.0 334.0 t 0 0 0 0 0 212.0 4.0 0.0 2.0 1.0 2.0 1.0

MA0161.3_rc_shift0 (NFIC_rc)
; oligos_7nt_mkv4_m4 versus MA0161.3_rc (NFIC_rc); m=16/18; ncol2=7; w=-1; offset=-1; strand=R; shift=0; score=0.41021; TGCCAAG----- ; cor=; Ncor= a 574.0 530.0 290.0 81.0 10745.0 10781.0 324.0 0 0 0 0 0 c 478.0 88.0 10973.0 11087.0 177.0 369.0 329.0 0 0 0 0 0 g 397.0 10725.0 121.0 129.0 333.0 303.0 10542.0 0 0 0 0 0 t 10158.0 264.0 223.0 310.0 352.0 154.0 412.0 0 0 0 0 0

MA0733.2_shift4 (EGR4)
; oligos_7nt_mkv4_m4 versus MA0733.2 (EGR4); m=17/18; ncol2=11; w=0; offset=3; strand=D; shift=4; score=0.406464; ----mCGCCCAC ; cor=; Ncor= a 0 0 0 0 2745.0 101.0 556.0 11.0 120.0 0.0 4500.0 44.0 c 0 0 0 0 1924.0 4466.0 475.0 4447.0 4448.0 4403.0 1055.0 4402.0 g 0 0 0 0 151.0 150.0 7053.0 63.0 107.0 110.0 348.0 114.0 t 0 0 0 0 158.0 319.0 707.0 88.0 76.0 131.0 363.0 245.0

MA0732.2_shift4 (EGR3)
; oligos_7nt_mkv4_m4 versus MA0732.2 (EGR3); m=18/18; ncol2=11; w=0; offset=3; strand=D; shift=4; score=0.402184; ----mCGCCCMC ; cor=; Ncor= a 0 0 0 0 1031.0 2.0 66.0 0.0 0.0 0.0 1159.0 0.0 c 0 0 0 0 701.0 1855.0 32.0 1856.0 1858.0 1823.0 455.0 1875.0 g 0 0 0 0 10.0 0.0 2158.0 2.0 0.0 7.0 11.0 7.0 t 0 0 0 0 20.0 13.0 36.0 0.0 10.0 80.0 4.0 2.0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_7nt_mkv4_m4_shift1 (oligos_7nt_mkv4_m4)				; oligos_7nt_mkv4_m4; m=0 (reference); ncol1=11; shift=1; ncol=12; -grCAaGCCCrs ; Alignment reference a 0 92 199 5 420 302 5 7 6 4 148 59 c 0 91 100 447 33 35 11 443 450 461 102 137 g 0 211 127 17 17 23 451 10 16 5 144 222 t 0 83 51 8 7 117 10 17 5 7 83 59
MA0746.3_shift1 (SP3)				; oligos_7nt_mkv4_m4 versus MA0746.3 (SP3); m=1/18; ncol2=11; w=0; offset=0; strand=D; shift=1; score=0.744977; -rCCACGCCCmC ; cor=; Ncor= a 0 2146.0 664.0 160.0 5253.0 6.0 465.0 0.0 0.0 2.0 3430.0 556.0 c 0 531.0 6591.0 6591.0 1338.0 6591.0 0.0 6591.0 6591.0 6591.0 3160.0 5116.0 g 0 4445.0 226.0 54.0 2.0 0.0 6591.0 0.0 0.0 2.0 39.0 297.0 t 0 421.0 345.0 202.0 11.0 12.0 504.0 0.0 9.0 718.0 552.0 1475.0
MA0741.1_shift1 (KLF16)				; oligos_7nt_mkv4_m4 versus MA0741.1 (KLF16); m=2/18; ncol2=11; w=0; offset=0; strand=D; shift=1; score=0.728929; -gmCMCgCCCMC ; cor=; Ncor= a 0 666.0 901.0 62.0 1150.0 66.0 497.0 8.0 2.0 16.0 437.0 32.0 c 0 535.0 1612.0 1612.0 461.0 1612.0 173.0 1612.0 1612.0 1612.0 1175.0 1612.0 g 0 1612.0 77.0 6.0 32.0 17.0 1612.0 0.0 8.0 3.0 19.0 23.0 t 0 240.0 116.0 45.0 0.0 19.0 403.0 0.0 0.0 97.0 40.0 370.0
MA1599.2_shift0 (ZNF682)				; oligos_7nt_mkv4_m4 versus MA1599.2 (ZNF682); m=3/18; ncol2=11; w=-1; offset=-1; strand=D; shift=0; score=0.701491; GGCyAAGCCCC- ; cor=; Ncor= a 110.0 103.0 100.0 48.0 953.0 999.0 6.0 13.0 5.0 7.0 66.0 0 c 85.0 42.0 795.0 597.0 72.0 31.0 7.0 999.0 1033.0 1034.0 896.0 0 g 774.0 877.0 105.0 55.0 20.0 22.0 1038.0 13.0 9.0 10.0 32.0 0 t 89.0 36.0 58.0 358.0 13.0 6.0 7.0 33.0 11.0 7.0 64.0 0
MA1512.2_shift2 (KLF11)				; oligos_7nt_mkv4_m4 versus MA1512.2 (KLF11); m=4/18; ncol2=10; w=0; offset=1; strand=D; shift=2; score=0.681397; --cCACGCCCmC ; cor=; Ncor= a 0 0 2022.0 650.0 8655.0 0.0 2426.0 11.0 1.0 0.0 4689.0 581.0 c 0 0 5549.0 8662.0 1289.0 9142.0 52.0 9161.0 9166.0 8941.0 4226.0 8403.0 g 0 0 401.0 156.0 115.0 0.0 8291.0 18.0 20.0 4.0 69.0 358.0 t 0 0 1192.0 506.0 27.0 38.0 349.0 23.0 7.0 885.0 761.0 1281.0
MA1564.2_shift2 (SP9)				; oligos_7nt_mkv4_m4 versus MA1564.2 (SP9); m=5/18; ncol2=10; w=0; offset=1; strand=D; shift=2; score=0.664644; --cCmCGCCCmc ; cor=; Ncor= a 0 0 566.0 321.0 2451.0 2.0 211.0 22.0 0.0 39.0 1192.0 188.0 c 0 0 2451.0 2451.0 1127.0 2451.0 200.0 2451.0 2451.0 2451.0 1259.0 1863.0 g 0 0 309.0 113.0 56.0 17.0 2451.0 0.0 0.0 24.0 38.0 191.0 t 0 0 518.0 284.0 96.0 9.0 173.0 14.0 30.0 412.0 353.0 588.0
MA1517.2_shift2 (KLF6)				; oligos_7nt_mkv4_m4 versus MA1517.2 (KLF6); m=6/18; ncol2=9; w=0; offset=1; strand=D; shift=2; score=0.624835; --cCACRCCCm- ; cor=; Ncor= a 0 0 569.0 432.0 2192.0 0.0 1024.0 0.0 25.0 71.0 955.0 0 c 0 0 2192.0 2192.0 284.0 2192.0 0.0 2192.0 2192.0 2192.0 665.0 0 g 0 0 332.0 298.0 60.0 0.0 2192.0 0.0 60.0 12.0 52.0 0 t 0 0 219.0 140.0 60.0 24.0 0.0 0.0 0.0 64.0 520.0 0
MA0747.2_shift2 (SP8)				; oligos_7nt_mkv4_m4 versus MA0747.2 (SP8); m=7/18; ncol2=11; w=0; offset=1; strand=D; shift=2; score=0.621249; --mCACgCCCmC ; cor=; Ncor= a 0 0 54.0 25.0 133.0 7.0 25.0 5.0 2.0 0.0 90.0 13.0 c 0 0 113.0 167.0 33.0 167.0 37.0 167.0 167.0 167.0 77.0 167.0 g 0 0 0.0 0.0 1.0 1.0 167.0 6.0 3.0 4.0 6.0 21.0 t 0 0 4.0 13.0 2.0 5.0 39.0 2.0 0.0 15.0 3.0 39.0
MA1516.2_shift0 (KLF3)				; oligos_7nt_mkv4_m4 versus MA1516.2 (KLF3); m=8/18; ncol2=10; w=-1; offset=-1; strand=D; shift=0; score=0.57155; grCCrCGCCC-- ; cor=; Ncor= a 7717.0 24771.0 1442.0 298.0 26757.0 2261.0 4245.0 202.0 83.0 77.0 0 0 c 2655.0 615.0 43259.0 43259.0 707.0 43259.0 334.0 43259.0 43259.0 43259.0 0 0 g 26568.0 18489.0 1954.0 248.0 16503.0 21.0 43259.0 31.0 29.0 48.0 0 0 t 6319.0 207.0 705.0 335.0 419.0 1409.0 1212.0 0.0 0.0 1218.0 0 0
MA1515.2_shift2 (KLF2)				; oligos_7nt_mkv4_m4 versus MA1515.2 (KLF2); m=9/18; ncol2=8; w=0; offset=1; strand=D; shift=2; score=0.528756; --CCmCrCCC-- ; cor=; Ncor= a 0 0 741.0 403.0 4622.0 0.0 1702.0 0.0 128.0 68.0 0 0 c 0 0 4622.0 4622.0 2265.0 4622.0 274.0 4622.0 4622.0 4622.0 0 0 g 0 0 495.0 186.0 1060.0 0.0 2920.0 49.0 195.0 105.0 0 0 t 0 0 346.0 312.0 214.0 78.0 167.0 22.0 9.0 444.0 0 0
MA1656.2_shift4 (ZNF449)				; oligos_7nt_mkv4_m4 versus MA1656.2 (ZNF449); m=10/18; ncol2=10; w=0; offset=3; strand=D; shift=4; score=0.502888; ----aAGCCCAA ; cor=; Ncor= a 0 0 0 0 4135.0 6239.0 108.0 139.0 64.0 68.0 6851.0 6620.0 c 0 0 0 0 1759.0 582.0 92.0 7088.0 7540.0 7479.0 300.0 96.0 g 0 0 0 0 1463.0 224.0 7368.0 322.0 28.0 54.0 182.0 829.0 t 0 0 0 0 303.0 615.0 92.0 111.0 28.0 59.0 327.0 115.0
MA0106.3_shift1 (TP53)				; oligos_7nt_mkv4_m4 versus MA0106.3 (TP53); m=11/18; ncol2=18; w=0; offset=0; strand=D; shift=1; score=0.492575; -rACATGyCcgG ; cor=; Ncor= a 0 7544.0 10514.0 45.0 11931.0 1710.0 8.0 244.0 1228.0 1145.0 3851.0 3584.0 c 0 1037.0 116.0 19689.0 204.0 374.0 2.0 12014.0 17286.0 11875.0 1474.0 756.0 g 0 6563.0 2433.0 13.0 653.0 137.0 20393.0 109.0 417.0 2151.0 9954.0 17846.0 t 0 2268.0 735.0 837.0 739.0 18893.0 0.0 7106.0 2642.0 3774.0 2118.0 1546.0
MA0657.2_shift0 (KLF13)				; oligos_7nt_mkv4_m4 versus MA0657.2 (KLF13); m=12/18; ncol2=17; w=-1; offset=-1; strand=D; shift=0; score=0.488366; tRmCACGCCCCY ; cor=; Ncor= a 733.0 1891.0 496.0 75.0 2384.0 0.0 24.0 0.0 4.0 1.0 509.0 3.0 c 46.0 0.0 923.0 924.0 0.0 1353.0 2.0 1596.0 1469.0 1760.0 1766.0 638.0 g 796.0 4630.0 58.0 2.0 11.0 7.0 3028.0 0.0 0.0 0.0 0.0 3.0 t 1766.0 59.0 102.0 61.0 0.0 3.0 9.0 7.0 0.0 16.0 10.0 1403.0
MA0597.3_rc_shift5 (THAP1_rc)				; oligos_7nt_mkv4_m4 versus MA0597.3_rc (THAP1_rc); m=13/18; ncol2=8; w=0; offset=4; strand=R; shift=5; score=0.448651; -----TGCCCTg ; cor=; Ncor= a 0 0 0 0 0 11.0 115.0 78.0 62.0 71.0 8.0 341.0 c 0 0 0 0 0 172.0 104.0 4942.0 4893.0 4958.0 220.0 933.0 g 0 0 0 0 0 95.0 4861.0 67.0 183.0 127.0 219.0 3351.0 t 0 0 0 0 0 4900.0 98.0 91.0 40.0 22.0 4731.0 553.0
MA0738.2_shift4 (HIC2)				; oligos_7nt_mkv4_m4 versus MA0738.2 (HIC2); m=14/18; ncol2=6; w=0; offset=3; strand=D; shift=4; score=0.42076; ----rTGCCM-- ; cor=; Ncor= a 0 0 0 0 2606.0 0.0 494.0 23.0 435.0 1466.0 0 0 c 0 0 0 0 394.0 117.0 354.0 4891.0 4891.0 3425.0 0 0 g 0 0 0 0 2285.0 0.0 4891.0 14.0 0.0 0.0 0 0 t 0 0 0 0 367.0 4891.0 151.0 0.0 59.0 0.0 0 0
MA1979.2_rc_shift5 (ZNF416_rc)				; oligos_7nt_mkv4_m4 versus MA1979.2_rc (ZNF416_rc); m=15/18; ncol2=10; w=0; offset=4; strand=R; shift=5; score=0.418309; -----tGCCCAG ; cor=; Ncor= a 0 0 0 0 0 66.0 18.0 3.0 3.0 2.0 336.0 3.0 c 0 0 0 0 0 29.0 3.0 341.0 335.0 335.0 1.0 7.0 g 0 0 0 0 0 38.0 320.0 1.0 5.0 7.0 6.0 334.0 t 0 0 0 0 0 212.0 4.0 0.0 2.0 1.0 2.0 1.0
MA0161.3_rc_shift0 (NFIC_rc)				; oligos_7nt_mkv4_m4 versus MA0161.3_rc (NFIC_rc); m=16/18; ncol2=7; w=-1; offset=-1; strand=R; shift=0; score=0.41021; TGCCAAG----- ; cor=; Ncor= a 574.0 530.0 290.0 81.0 10745.0 10781.0 324.0 0 0 0 0 0 c 478.0 88.0 10973.0 11087.0 177.0 369.0 329.0 0 0 0 0 0 g 397.0 10725.0 121.0 129.0 333.0 303.0 10542.0 0 0 0 0 0 t 10158.0 264.0 223.0 310.0 352.0 154.0 412.0 0 0 0 0 0
MA0733.2_shift4 (EGR4)				; oligos_7nt_mkv4_m4 versus MA0733.2 (EGR4); m=17/18; ncol2=11; w=0; offset=3; strand=D; shift=4; score=0.406464; ----mCGCCCAC ; cor=; Ncor= a 0 0 0 0 2745.0 101.0 556.0 11.0 120.0 0.0 4500.0 44.0 c 0 0 0 0 1924.0 4466.0 475.0 4447.0 4448.0 4403.0 1055.0 4402.0 g 0 0 0 0 151.0 150.0 7053.0 63.0 107.0 110.0 348.0 114.0 t 0 0 0 0 158.0 319.0 707.0 88.0 76.0 131.0 363.0 245.0
MA0732.2_shift4 (EGR3)				; oligos_7nt_mkv4_m4 versus MA0732.2 (EGR3); m=18/18; ncol2=11; w=0; offset=3; strand=D; shift=4; score=0.402184; ----mCGCCCMC ; cor=; Ncor= a 0 0 0 0 1031.0 2.0 66.0 0.0 0.0 0.0 1159.0 0.0 c 0 0 0 0 701.0 1855.0 32.0 1856.0 1858.0 1823.0 455.0 1875.0 g 0 0 0 0 10.0 0.0 2158.0 2.0 0.0 7.0 11.0 7.0 t 0 0 0 0 20.0 13.0 36.0 0.0 10.0 80.0 4.0 2.0