position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.075027_2026-01-05.075027_raWB4h/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 1 -ci 20 -img_format png -title sEOAD_condition -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.075027_2026-01-05.075027_raWB4h/results/composition/peak-motifs_test_profiles-1str-ovlp_1nt_ci20.tab
 Citation: van Helden, et al. (2000).  Nucleic Acids Res 28, 1000-1010.
 Sequence file                	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.075027_2026-01-05.075027_raWB4h/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta
 Sequence format              	fasta
 Sequence type                	dna
 Output file                  	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.075027_2026-01-05.075027_raWB4h/results/composition/peak-motifs_test_profiles-1str-ovlp_1nt_ci20.tab
 Oligo length                 	1
 Occurrences counted  on a single  strands
 Conditions of applicability checked.
 Background model estimation: homogeneous repartition
 Sequence statistics:
	Nb of sequences              	2229
	Sum of sequence lengths      	1114500
	Min sequence length          	0
	Max sequence length          	500
	Average sequence length      	500
	Possible positions           	1114500
 Oligonucleotide statistics:
	Total occurrences    	1073540
 Position interval parameters:
	Position interval    	20
	Number of windows    	26
	Total positions      	1114500
	Degrees of freedom   	25
 K-mer clustering parameters:
	Number of clusters   	0
	Clustering method    	complete
 Position intervals:
	window	[min,max]	mid	seq	occ
	1	-13	[-259,-240]	-249.5	2229	22290
	2	-12	[-239,-220]	-229.5	2229	44580
	3	-11	[-219,-200]	-209.5	2229	44580
	4	-10	[-199,-180]	-189.5	2229	44580
	5	-9	[-179,-160]	-169.5	2229	44580
	6	-8	[-159,-140]	-149.5	2229	44580
	7	-7	[-139,-120]	-129.5	2229	44580
	8	-6	[-119,-100]	-109.5	2229	44580
	9	-5	[-99,-80]	-89.5	2229	44580
	10	-4	[-79,-60]	-69.5	2229	44580
	11	-3	[-59,-40]	-49.5	2229	44580
	12	-2	[-39,-20]	-29.5	2229	44580
	13	-1	[-19,0]	-9.5	2229	44580
	14	0	[1,20]	10.5	2229	44580
	15	1	[21,40]	30.5	2229	44580
	16	2	[41,60]	50.5	2229	44580
	17	3	[61,80]	70.5	2229	44580
	18	4	[81,100]	90.5	2229	44580
	19	5	[101,120]	110.5	2229	44580
	20	6	[121,140]	130.5	2229	44580
	21	7	[141,160]	150.5	2229	44580
	22	8	[161,180]	170.5	2229	44580
	23	9	[181,200]	190.5	2229	44580
	24	10	[201,220]	210.5	2229	44580
	25	11	[221,240]	230.5	2229	44580
	26	12	[241,260]	250.5	2229	22290

 Column headers
	1	seq            	pattern sequence
	2	id             	pattern identifier
	3	occ            	pattern occurrences
	4	chi2           	observed chi-square
	5	df             	degrees of freedom
	6	Pval           	P-value (probability for one word to be a false positive)
	7	Eval           	E-value; expected number of false positives (Eval = Pval * nb_tests)
	8	sig            	Significance (sig = -log10(Eval))
	9	rank           	rank of the pattern according to sorting criterion
	10	-249.5         	occurrences in window	1	[-259,-240]
	11	-229.5         	occurrences in window	2	[-239,-220]
	12	-209.5         	occurrences in window	3	[-219,-200]
	13	-189.5         	occurrences in window	4	[-199,-180]
	14	-169.5         	occurrences in window	5	[-179,-160]
	15	-149.5         	occurrences in window	6	[-159,-140]
	16	-129.5         	occurrences in window	7	[-139,-120]
	17	-109.5         	occurrences in window	8	[-119,-100]
	18	-89.5          	occurrences in window	9	[-99,-80]
	19	-69.5          	occurrences in window	10	[-79,-60]
	20	-49.5          	occurrences in window	11	[-59,-40]
	21	-29.5          	occurrences in window	12	[-39,-20]
	22	-9.5           	occurrences in window	13	[-19,0]
	23	10.5           	occurrences in window	14	[1,20]
	24	30.5           	occurrences in window	15	[21,40]
	25	50.5           	occurrences in window	16	[41,60]
	26	70.5           	occurrences in window	17	[61,80]
	27	90.5           	occurrences in window	18	[81,100]
	28	110.5          	occurrences in window	19	[101,120]
	29	130.5          	occurrences in window	20	[121,140]
	30	150.5          	occurrences in window	21	[141,160]
	31	170.5          	occurrences in window	22	[161,180]
	32	190.5          	occurrences in window	23	[181,200]
	33	210.5          	occurrences in window	24	[201,220]
	34	230.5          	occurrences in window	25	[221,240]
	35	250.5          	occurrences in window	26	[241,260]

 Host name	rsat
 Job started	2026-01-05.075032
 Job done	2026-01-05.075037
 Seconds	5.42
	user	5.42
	system	0.01
	cuser	0.01
;	csystem	0