/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.075027_2026-01-05.075027_raWB4h/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab 
 position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.075027_2026-01-05.075027_raWB4h/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 2 -ci 20 -img_format png -title sEOAD_condition -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.075027_2026-01-05.075027_raWB4h/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Citation: van Helden, et al. (2000).  Nucleic Acids Res 28, 1000-1010.
 Sequence file                	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.075027_2026-01-05.075027_raWB4h/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta
 Sequence format              	fasta
 Sequence type                	dna
 Output file                  	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.075027_2026-01-05.075027_raWB4h/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Oligo length                 	2
 Occurrences counted  on a single  strands
 Conditions of applicability checked.
 Background model estimation: homogeneous repartition
 Sequence statistics:
	Nb of sequences              	2229
	Sum of sequence lengths      	1114500
	Min sequence length          	0
	Max sequence length          	500
	Average sequence length      	500
	Possible positions           	1112271
 Oligonucleotide statistics:
	Total occurrences    	1070966
 Position interval parameters:
	Position interval    	20
	Number of windows    	26
	Total positions      	1112271
	Degrees of freedom   	25
 K-mer clustering parameters:
	Number of clusters   	0
	Clustering method    	complete
 Position intervals:
	window	[min,max]	mid	seq	occ
	1	-13	[-259,-240]	-249.5	2229	22290
	2	-12	[-239,-220]	-229.5	2229	44580
	3	-11	[-219,-200]	-209.5	2229	44580
	4	-10	[-199,-180]	-189.5	2229	44580
	5	-9	[-179,-160]	-169.5	2229	44580
	6	-8	[-159,-140]	-149.5	2229	44580
	7	-7	[-139,-120]	-129.5	2229	44580
	8	-6	[-119,-100]	-109.5	2229	44580
	9	-5	[-99,-80]	-89.5	2229	44580
	10	-4	[-79,-60]	-69.5	2229	44580
	11	-3	[-59,-40]	-49.5	2229	44580
	12	-2	[-39,-20]	-29.5	2229	44580
	13	-1	[-19,0]	-9.5	2229	44580
	14	0	[1,20]	10.5	2229	44580
	15	1	[21,40]	30.5	2229	44580
	16	2	[41,60]	50.5	2229	44580
	17	3	[61,80]	70.5	2229	44580
	18	4	[81,100]	90.5	2229	44580
	19	5	[101,120]	110.5	2229	44580
	20	6	[121,140]	130.5	2229	44580
	21	7	[141,160]	150.5	2229	44580
	22	8	[161,180]	170.5	2229	44580
	23	9	[181,200]	190.5	2229	44580
	24	10	[201,220]	210.5	2229	44580
	25	11	[221,240]	230.5	2229	44580
	26	12	[241,260]	250.5	2229	20061

 Column headers
	1	seq            	pattern sequence
	2	id             	pattern identifier
	3	occ            	pattern occurrences
	4	chi2           	observed chi-square
	5	df             	degrees of freedom
	6	Pval           	P-value (probability for one word to be a false positive)
	7	Eval           	E-value; expected number of false positives (Eval = Pval * nb_tests)
	8	sig            	Significance (sig = -log10(Eval))
	9	rank           	rank of the pattern according to sorting criterion
	10	-249.5         	occurrences in window	1	[-259,-240]
	11	-229.5         	occurrences in window	2	[-239,-220]
	12	-209.5         	occurrences in window	3	[-219,-200]
	13	-189.5         	occurrences in window	4	[-199,-180]
	14	-169.5         	occurrences in window	5	[-179,-160]
	15	-149.5         	occurrences in window	6	[-159,-140]
	16	-129.5         	occurrences in window	7	[-139,-120]
	17	-109.5         	occurrences in window	8	[-119,-100]
	18	-89.5          	occurrences in window	9	[-99,-80]
	19	-69.5          	occurrences in window	10	[-79,-60]
	20	-49.5          	occurrences in window	11	[-59,-40]
	21	-29.5          	occurrences in window	12	[-39,-20]
	22	-9.5           	occurrences in window	13	[-19,0]
	23	10.5           	occurrences in window	14	[1,20]
	24	30.5           	occurrences in window	15	[21,40]
	25	50.5           	occurrences in window	16	[41,60]
	26	70.5           	occurrences in window	17	[61,80]
	27	90.5           	occurrences in window	18	[81,100]
	28	110.5          	occurrences in window	19	[101,120]
	29	130.5          	occurrences in window	20	[121,140]
	30	150.5          	occurrences in window	21	[141,160]
	31	170.5          	occurrences in window	22	[161,180]
	32	190.5          	occurrences in window	23	[181,200]
	33	210.5          	occurrences in window	24	[201,220]
	34	230.5          	occurrences in window	25	[221,240]
	35	250.5          	occurrences in window	26	[241,260]
seq id occ chi2 df Pval Eval sig rank -249.5 -229.5 -209.5 -189.5 -169.5 -149.5 -129.5 -109.5 -89.5 -69.5 -49.5 -29.5 -9.5 10.5 30.5 50.5 70.5 90.5 110.5 130.5 150.5 170.5 190.5 210.5 230.5 250.5
at at 53085 1367.7 25 0.0e+00 0 300 1 1297 2449 2415 2489 2404 2263 2306 2274 2028 1823 1669 1630 1534 1554 1631 1689 1868 1980 2264 2282 2362 2366 2363 2473 2535 1137
ta ta 44229 926.7 25 0.0e+00 0 300 2 1031 2045 2035 1990 2007 1867 1885 1843 1752 1610 1451 1364 1302 1352 1401 1387 1567 1716 1878 1868 1945 1963 1991 2004 2036 939
gc gc 66957 714.3 25 0.0e+00 0 300 3 1213 2441 2425 2462 2442 2491 2503 2598 2795 2981 3091 3092 3123 3061 3156 3077 2931 2641 2621 2446 2452 2454 2521 2422 2469 1049
aa aa 78158 488.7 25 0.0e+00 0 300 4 1786 3481 3333 3251 3302 3295 3397 3224 3028 2882 2772 2793 2910 2961 2805 2847 2656 3046 2991 3229 3182 3265 3309 3426 3423 1564
tt tt 76817 488.6 25 0.0e+00 0 300 5 1598 3268 3350 3236 3206 3149 3199 3010 2908 2686 2742 2746 2812 2896 2788 2699 2711 3273 3257 3402 3291 3169 3219 3234 3410 1558
gg gg 81119 411.6 25 0.0e+00 0 300 6 1579 2973 3143 3013 3146 3114 3122 3304 3278 3505 3602 3630 3580 3533 3397 3520 3602 3335 3241 3172 3066 3101 2949 2917 2909 1388
cg cg 21260 328.3 25 1.2e-54 1.9e-53 52.72 7 346 738 773 736 793 739 808 832 892 926 1035 1009 1029 1020 987 967 937 852 858 821 798 795 793 712 757 307
cc cc 79688 325.8 25 3.9e-54 6.2e-53 52.21 8 1474 2982 2850 2883 2968 3238 3128 3222 3359 3445 3465 3480 3266 3450 3522 3465 3292 3184 3246 3204 3068 3171 3117 2891 2991 1327
ag ag 86480 265.9 25 3.9e-42 6.3e-41 40.20 9 1709 3419 3265 3373 3391 3363 3359 3517 3613 3724 3694 3797 3769 3730 3652 3702 3601 3491 3308 3293 3222 3320 3262 3204 3235 1467
ct ct 85376 238.3 25 1.1e-36 1.7e-35 34.76 10 1634 3273 3280 3189 3197 3364 3311 3247 3447 3572 3674 3639 3620 3668 3707 3671 3667 3590 3473 3271 3341 3273 3303 3261 3205 1499
ga ga 67746 55.5 25 4.3e-04 0.0068 2.17 11 1345 2768 2629 2719 2725 2729 2715 2815 2779 2753 2764 2785 2809 2817 2720 2712 2851 2750 2675 2648 2601 2690 2582 2583 2563 1219
ca ca 79480 48.5 25 3.3e-03 0.052 1.28 12 1627 3188 3071 3171 3148 3146 3120 3129 3219 3288 3298 3213 3295 3217 3320 3335 3194 3058 3110 3146 3204 3099 3124 3202 3204 1354
tc tc 67228 44.5 25 9.5e-03 0.15 0.82 13 1336 2616 2667 2622 2588 2652 2691 2579 2692 2664 2815 2791 2730 2750 2727 2809 2730 2780 2789 2671 2749 2614 2640 2640 2645 1241
tg tg 79193 33.9 25 1.1e-01 1.7 -0.24 14 1596 3066 3143 3191 3114 3130 3181 3166 3180 3254 3172 3239 3295 3140 3269 3210 3350 3191 3127 3147 3141 3145 3105 3153 3071 1417
ac ac 51938 28.0 25 3.1e-01 5 -0.70 15 1030 2156 2011 2021 2107 2097 2043 2048 2104 2139 2121 1986 2066 2064 2194 2054 2108 2063 2095 2091 2143 2076 2054 2122 2045 900
gt gt 52212 24.1 25 5.2e-01 8.2 -0.92 16 1039 2053 2100 2148 2090 2075 2059 2119 2113 2134 2040 2167 2132 2055 2033 2099 2098 2144 2013 2200 2105 2071 2090 2036 2049 950 
 Host name	rsat
 Job started	2026-01-05.075038
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