/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.075027_2026-01-05.075027_raWB4h/results/discovered_motifs/oligos_7nt_mkv5_m3/peak-motifs_oligos_7nt_mkv5_m3_vs_db_JASPAR2024_CORE_vertebrates_non-redundant.tab 
 compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.075027_2026-01-05.075027_raWB4h/results/discovered_motifs/oligos_7nt_mkv5_m3/peak-motifs_oligos_7nt_mkv5_m3.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.075027_2026-01-05.075027_raWB4h/results/discovered_motifs/oligos_7nt_mkv5_m3/peak-motifs_oligos_7nt_mkv5_m3_vs_db_JASPAR2024_CORE_vertebrates_non-redundant
 Program version       	1.118
 Quick mode 
 Input files
	file1 	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.075027_2026-01-05.075027_raWB4h/results/discovered_motifs/oligos_7nt_mkv5_m3/peak-motifs_oligos_7nt_mkv5_m3.tf
	file2 	$RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt
 Output files
	prefix       	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.075027_2026-01-05.075027_raWB4h/results/discovered_motifs/oligos_7nt_mkv5_m3/peak-motifs_oligos_7nt_mkv5_m3_vs_db_JASPAR2024_CORE_vertebrates_non-redundant
	match_table_html	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.075027_2026-01-05.075027_raWB4h/results/discovered_motifs/oligos_7nt_mkv5_m3/peak-motifs_oligos_7nt_mkv5_m3_vs_db_JASPAR2024_CORE_vertebrates_non-redundant.html
	match_table_txt	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.075027_2026-01-05.075027_raWB4h/results/discovered_motifs/oligos_7nt_mkv5_m3/peak-motifs_oligos_7nt_mkv5_m3_vs_db_JASPAR2024_CORE_vertebrates_non-redundant.tab
	alignments_1ton_html	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.075027_2026-01-05.075027_raWB4h/results/discovered_motifs/oligos_7nt_mkv5_m3/peak-motifs_oligos_7nt_mkv5_m3_vs_db_JASPAR2024_CORE_vertebrates_non-redundant_alignments_1ton.html
	alignments_1ton	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.075027_2026-01-05.075027_raWB4h/results/discovered_motifs/oligos_7nt_mkv5_m3/peak-motifs_oligos_7nt_mkv5_m3_vs_db_JASPAR2024_CORE_vertebrates_non-redundant_alignments_1ton.tab
	html_index   	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.075027_2026-01-05.075027_raWB4h/results/discovered_motifs/oligos_7nt_mkv5_m3/peak-motifs_oligos_7nt_mkv5_m3_vs_db_JASPAR2024_CORE_vertebrates_non-redundant_index.html
 Matrices
	file1	1 matrices	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.075027_2026-01-05.075027_raWB4h/results/discovered_motifs/oligos_7nt_mkv5_m3/peak-motifs_oligos_7nt_mkv5_m3.tf
		file1	1	13	1714
	file2	879 matrices	$RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt
		file2		1		6		20
		file2		2		14		43
		file2		3		10		25
		file2		4		15		10
		file2		5		10		17
		file2		6		10		18
		file2		7		17		25
		file2		8		15		33
		file2		9		14		16
		file2		10		6		16
		file2		11		15		1369
		...	869 more matrices
 Column content
	1	id1          	Identifier of the first matrix
	2	id2          	Identifier of the second matrix
	3	name1        	Name of the first matrix
	4	name2        	Name of the second matrix
	5	cor          	Pearson coefficient of correlation between frequency matrices
	6	Ncor         	Normalized correlation. Ncor = cor * Wr
	7	w1           	Width of the first matrix
	8	w2           	Width of the second matrix
	9	w            	Alignment length (number of overlapping columns between matrix 1 and matrix 2, as a function of the offset)
	10	W            	Total alignment length (overlapping + non-overlapping columns). W = w1 + w2 - w
	11	Wr           	Relative alignment length (overlap divided by the total alignemnt length). Wr = w/W
	12	wr1          	Alignment length relative to the width of the first matrix. wr1 = w/w1
	13	wr2          	Alignment length relative to the width of the second matrix. wr2 = w/w2
	14	strand       	"strand", i.e. orientation of matrix 2 relative to matrix 1 (D=direct;  R=reverse)
	15	offset       	shift of the second matrix relative to the first matrix (negative:left; positive: right)
id1 id2 name1 name2 cor Ncor w1 w2 w W Wr wr1 wr2 strand offset
oligos_7nt_mkv5_m3 MA0687.2 oligos_7nt_mkv5_m3 SPIC 0.866 0.866 13 13 13 13 1.0000 1.0000 1.0000 D 0
oligos_7nt_mkv5_m3 MA0080.7 oligos_7nt_mkv5_m3 Spi1 0.930 0.797 13 13 12 14 0.8571 0.9231 0.9231 D 1
oligos_7nt_mkv5_m3 MA0081.3 oligos_7nt_mkv5_m3 SPIB 0.881 0.756 13 13 12 14 0.8571 0.9231 0.9231 R 1
oligos_7nt_mkv5_m3 MA1954.2 oligos_7nt_mkv5_m3 FOXO1::ELK1 0.807 0.692 13 13 12 14 0.8571 0.9231 0.9231 D -1
oligos_7nt_mkv5_m3 MA1953.2 oligos_7nt_mkv5_m3 FOXO1::ELF1 0.788 0.676 13 13 12 14 0.8571 0.9231 0.9231 D -1
oligos_7nt_mkv5_m3 MA1956.2 oligos_7nt_mkv5_m3 FOXO1::FLI1 0.779 0.668 13 13 12 14 0.8571 0.9231 0.9231 D -1
oligos_7nt_mkv5_m3 MA1955.2 oligos_7nt_mkv5_m3 FOXO1::ELK3 0.779 0.668 13 13 12 14 0.8571 0.9231 0.9231 D -1
oligos_7nt_mkv5_m3 MA1942.2 oligos_7nt_mkv5_m3 ETV2::FOXI1 0.788 0.667 13 11 11 13 0.8462 0.8462 1.0000 D 1
oligos_7nt_mkv5_m3 MA1952.2 oligos_7nt_mkv5_m3 FOXJ2::ELF1 0.784 0.664 13 11 11 13 0.8462 0.8462 1.0000 D 1
oligos_7nt_mkv5_m3 MA1950.2 oligos_7nt_mkv5_m3 FLI1::FOXI1 0.762 0.644 13 11 11 13 0.8462 0.8462 1.0000 D 0
oligos_7nt_mkv5_m3 MA0474.4 oligos_7nt_mkv5_m3 Erg 0.816 0.628 13 10 10 13 0.7692 0.7692 1.0000 D 3
oligos_7nt_mkv5_m3 MA0062.4 oligos_7nt_mkv5_m3 GABPA 0.806 0.620 13 10 10 13 0.7692 0.7692 1.0000 R 3
oligos_7nt_mkv5_m3 MA1935.2 oligos_7nt_mkv5_m3 ERF::FOXI1 0.789 0.607 13 10 10 13 0.7692 0.7692 1.0000 D 1
oligos_7nt_mkv5_m3 MA1946.2 oligos_7nt_mkv5_m3 ETV5::FOXI1 0.770 0.605 13 12 11 14 0.7857 0.8462 0.9167 D -1
oligos_7nt_mkv5_m3 MA1936.2 oligos_7nt_mkv5_m3 ERF::FOXO1 0.761 0.598 13 12 11 14 0.7857 0.8462 0.9167 D -1
oligos_7nt_mkv5_m3 MA0640.3 oligos_7nt_mkv5_m3 ELF3 0.846 0.586 13 9 9 13 0.6923 0.6923 1.0000 R 4
oligos_7nt_mkv5_m3 MA0598.4 oligos_7nt_mkv5_m3 EHF 0.837 0.579 13 9 9 13 0.6923 0.6923 1.0000 R 4
oligos_7nt_mkv5_m3 MA2332.1 oligos_7nt_mkv5_m3 ZNF175 0.829 0.574 13 9 9 13 0.6923 0.6923 1.0000 D 3
oligos_7nt_mkv5_m3 MA0761.3 oligos_7nt_mkv5_m3 ETV1 0.811 0.562 13 9 9 13 0.6923 0.6923 1.0000 D 3
oligos_7nt_mkv5_m3 MA1992.2 oligos_7nt_mkv5_m3 Ikzf3 0.803 0.556 13 9 9 13 0.6923 0.6923 1.0000 D 4
oligos_7nt_mkv5_m3 MA0645.2 oligos_7nt_mkv5_m3 ETV6 0.799 0.553 13 9 9 13 0.6923 0.6923 1.0000 D 4
oligos_7nt_mkv5_m3 MA0473.4 oligos_7nt_mkv5_m3 ELF1 0.794 0.550 13 9 9 13 0.6923 0.6923 1.0000 D 4
oligos_7nt_mkv5_m3 MA1708.2 oligos_7nt_mkv5_m3 ETV7 0.791 0.548 13 9 9 13 0.6923 0.6923 1.0000 D 4
oligos_7nt_mkv5_m3 MA1508.2 oligos_7nt_mkv5_m3 IKZF1 0.866 0.533 13 8 8 13 0.6154 0.6154 1.0000 D 2
oligos_7nt_mkv5_m3 MA0136.4 oligos_7nt_mkv5_m3 Elf5 0.852 0.525 13 8 8 13 0.6154 0.6154 1.0000 D 4
oligos_7nt_mkv5_m3 MA1947.2 oligos_7nt_mkv5_m3 ETV5::FOXO1 0.750 0.482 13 10 9 14 0.6429 0.6923 0.9000 D -1
oligos_7nt_mkv5_m3 MA2326.1 oligos_7nt_mkv5_m3 IKZF2 0.998 0.461 13 6 6 13 0.4615 0.4615 1.0000 D 5
oligos_7nt_mkv5_m3 MA0508.4 oligos_7nt_mkv5_m3 PRDM1 0.801 0.431 13 7 7 13 0.5385 0.5385 1.0000 R 4 
 Host name	rsat
 Job started	2026-01-05.075435
 Job done	2026-01-05.075452
 Seconds	3.03
	user	3.03
	system	0.99
	cuser	11.91
;	csystem	1.14