One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.115003_2026-01-05.115003_UARk68/results/discovered_motifs/oligos_6nt_mkv4_m4/peak-motifs_oligos_6nt_mkv4_m4.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.115003_2026-01-05.115003_UARk68/results/discovered_motifs/oligos_6nt_mkv4_m4/peak-motifs_oligos_6nt_mkv4_m4_vs_db_JASPAR2024_CORE_vertebrates_non-redundant

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv4_m4_shift3 ; 26 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv4_m4_shift3 (oligos_6nt_mkv4_m4)
; oligos_6nt_mkv4_m4; m=0 (reference); ncol1=10; shift=3; ncol=13; ---srCGCaCGss ; Alignment reference a 0 0 0 469 863 68 219 80 1797 41 87 365 530 c 0 0 0 1350 736 3100 76 3047 650 3087 88 1525 1305 g 0 0 0 991 1359 80 2964 154 646 92 3102 897 1082 t 0 0 0 525 377 87 76 54 242 115 58 548 418

MA2325.1_shift5 (EPAS1)
; oligos_6nt_mkv4_m4 versus MA2325.1 (EPAS1); m=1/25; ncol2=9; w=0; offset=2; strand=D; shift=5; score=0.579609; -----cGCACGTm ; cor=; Ncor= a 0 0 0 0 0 73.0 28.0 1.0 620.0 2.0 7.0 5.0 410.0 c 0 0 0 0 0 352.0 23.0 635.0 4.0 629.0 2.0 36.0 174.0 g 0 0 0 0 0 115.0 545.0 1.0 15.0 6.0 626.0 16.0 43.0 t 0 0 0 0 0 100.0 44.0 3.0 1.0 3.0 5.0 583.0 13.0

MA0162.5_shift2 (EGR1)
; oligos_6nt_mkv4_m4 versus MA0162.5 (EGR1); m=2/25; ncol2=10; w=-1; offset=-1; strand=D; shift=2; score=0.578742; --mCGCCCACgC- ; cor=; Ncor= a 0 0 14508.0 642.0 5110.0 227.0 1440.0 314.0 22297.0 153.0 4696.0 969.0 0 c 0 0 10303.0 28403.0 1131.0 29338.0 27321.0 28958.0 5420.0 29507.0 2806.0 25196.0 0 g 0 0 3854.0 756.0 22237.0 665.0 1455.0 698.0 2122.0 699.0 20544.0 2157.0 0 t 0 0 1933.0 797.0 2120.0 368.0 382.0 628.0 759.0 239.0 2552.0 2276.0 0

MA0632.3_shift4 (TCFL5)
; oligos_6nt_mkv4_m4 versus MA0632.3 (TCFL5); m=3/25; ncol2=8; w=0; offset=1; strand=D; shift=4; score=0.561887; ----kCrCGCGC- ; cor=; Ncor= a 0 0 0 0 2810.0 0.0 72543.0 0.0 1566.0 1765.0 3520.0 1593.0 0 c 0 0 0 0 10582.0 72543.0 0.0 72543.0 0.0 57092.0 657.0 72543.0 0 g 0 0 0 0 22297.0 0.0 29710.0 0.0 72543.0 0.0 72543.0 4594.0 0 t 0 0 0 0 36854.0 0.0 9359.0 1643.0 0.0 15451.0 0.0 635.0 0

MA1650.2_shift2 (ZBTB14)
; oligos_6nt_mkv4_m4 versus MA1650.2 (ZBTB14); m=4/25; ncol2=8; w=-1; offset=-1; strand=D; shift=2; score=0.550141; --CCGCGCAC--- ; cor=; Ncor= a 0 0 335.0 41.0 93.0 68.0 132.0 56.0 4500.0 99.0 0 0 0 c 0 0 3525.0 4292.0 294.0 4078.0 305.0 4178.0 37.0 3674.0 0 0 0 g 0 0 614.0 155.0 4098.0 319.0 4043.0 261.0 10.0 651.0 0 0 0 t 0 0 73.0 59.0 62.0 82.0 67.0 52.0 0.0 123.0 0 0 0

MA0506.3_rc_shift4 (Nrf1_rc)
; oligos_6nt_mkv4_m4 versus MA0506.3_rc (Nrf1_rc); m=5/25; ncol2=12; w=0; offset=1; strand=R; shift=4; score=0.531355; ----gCGCAkGCG ; cor=; Ncor= a 0 0 0 0 2834.0 710.0 254.0 86.0 11578.0 408.0 234.0 224.0 195.0 c 0 0 0 0 1008.0 11169.0 201.0 12324.0 446.0 2514.0 510.0 12026.0 343.0 g 0 0 0 0 8461.0 576.0 12143.0 251.0 577.0 5475.0 11838.0 193.0 11783.0 t 0 0 0 0 426.0 274.0 131.0 68.0 128.0 4332.0 147.0 286.0 408.0

MA1959.2_rc_shift2 (KLF7_rc)
; oligos_6nt_mkv4_m4 versus MA1959.2_rc (KLF7_rc); m=6/25; ncol2=8; w=-1; offset=-1; strand=R; shift=2; score=0.495379; --CcMCGCCC--- ; cor=; Ncor= a 0 0 1.0 167.0 254.0 1.0 167.0 1.0 1.0 1.0 0 0 0 c 0 0 997.0 642.0 720.0 997.0 1.0 997.0 997.0 997.0 0 0 0 g 0 0 1.0 42.0 25.0 1.0 788.0 1.0 1.0 1.0 0 0 0 t 0 0 1.0 150.0 1.0 1.0 45.0 1.0 1.0 1.0 0 0 0

MA1106.2_rc_shift6 (HIF1A_rc)
; oligos_6nt_mkv4_m4 versus MA1106.2_rc (HIF1A_rc); m=7/25; ncol2=6; w=0; offset=3; strand=R; shift=6; score=0.494594; ------GCACGT- ; cor=; Ncor= a 0 0 0 0 0 0 35.0 11.0 934.0 0.0 1.0 2.0 0 c 0 0 0 0 0 0 20.0 844.0 11.0 979.0 0.0 2.0 0 g 0 0 0 0 0 0 837.0 41.0 33.0 0.0 979.0 0.0 0 t 0 0 0 0 0 0 88.0 84.0 2.0 1.0 0.0 976.0 0

MA1560.2_rc_shift6 (SOHLH2_rc)
; oligos_6nt_mkv4_m4 versus MA1560.2_rc (SOHLH2_rc); m=8/25; ncol2=8; w=0; offset=3; strand=R; shift=6; score=0.492212; ------gCACGTG ; cor=; Ncor= a 0 0 0 0 0 0 153.0 4.0 1212.0 15.0 7.0 0.0 70.0 c 0 0 0 0 0 0 172.0 1212.0 0.0 1212.0 11.0 41.0 29.0 g 0 0 0 0 0 0 1212.0 4.0 65.0 0.0 1212.0 0.0 1212.0 t 0 0 0 0 0 0 272.0 41.0 36.0 14.0 0.0 1212.0 45.0

MA1515.2_shift2 (KLF2)
; oligos_6nt_mkv4_m4 versus MA1515.2 (KLF2); m=9/25; ncol2=8; w=-1; offset=-1; strand=D; shift=2; score=0.484375; --CCmCrCCC--- ; cor=; Ncor= a 0 0 741.0 403.0 4622.0 0.0 1702.0 0.0 128.0 68.0 0 0 0 c 0 0 4622.0 4622.0 2265.0 4622.0 274.0 4622.0 4622.0 4622.0 0 0 0 g 0 0 495.0 186.0 1060.0 0.0 2920.0 49.0 195.0 105.0 0 0 0 t 0 0 346.0 312.0 214.0 78.0 167.0 22.0 9.0 444.0 0 0 0

MA2126.1_rc_shift2 (Zfp961_rc)
; oligos_6nt_mkv4_m4 versus MA2126.1_rc (Zfp961_rc); m=10/25; ncol2=8; w=-1; offset=-1; strand=R; shift=2; score=0.483126; --TGGCGCCC--- ; cor=; Ncor= a 0 0 61.0 26.0 16.0 15.0 182.0 116.0 71.0 8.0 0 0 0 c 0 0 69.0 30.0 23.0 1372.0 9.0 1278.0 1312.0 1372.0 0 0 0 g 0 0 74.0 1353.0 1367.0 8.0 1219.0 13.0 22.0 20.0 0 0 0 t 0 0 1214.0 9.0 12.0 23.0 8.0 11.0 13.0 18.0 0 0 0

MA1513.2_shift2 (KLF15)
; oligos_6nt_mkv4_m4 versus MA1513.2 (KLF15); m=11/25; ncol2=8; w=-1; offset=-1; strand=D; shift=2; score=0.480495; --cCCCGCCC--- ; cor=; Ncor= a 0 0 937.0 40.0 93.0 0.0 0.0 11.0 55.0 12.0 0 0 0 c 0 0 6506.0 11234.0 10940.0 11368.0 0.0 11345.0 10954.0 11254.0 0 0 0 g 0 0 2117.0 86.0 333.0 1.0 11369.0 2.0 359.0 100.0 0 0 0 t 0 0 1809.0 9.0 3.0 0.0 0.0 11.0 1.0 3.0 0 0 0

MA0004.1_rc_shift7 (Arnt_rc)
; oligos_6nt_mkv4_m4 versus MA0004.1_rc (Arnt_rc); m=12/25; ncol2=6; w=0; offset=4; strand=R; shift=7; score=0.47054; -------CACGTG ; cor=; Ncor= a 0 0 0 0 0 0 0 0.0 20.0 0.0 0.0 0.0 0.0 c 0 0 0 0 0 0 0 20.0 0.0 20.0 0.0 1.0 0.0 g 0 0 0 0 0 0 0 0.0 0.0 0.0 20.0 0.0 16.0 t 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 19.0 4.0

MA0147.4_rc_shift6 (MYC_rc)
; oligos_6nt_mkv4_m4 versus MA0147.4_rc (MYC_rc); m=13/25; ncol2=8; w=0; offset=3; strand=R; shift=6; score=0.469975; ------gCACGTG ; cor=; Ncor= a 0 0 0 0 0 0 524.0 46.0 4658.0 38.0 293.0 113.0 27.0 c 0 0 0 0 0 0 1198.0 4817.0 63.0 4578.0 70.0 170.0 31.0 g 0 0 0 0 0 0 2801.0 56.0 162.0 157.0 4525.0 59.0 4840.0 t 0 0 0 0 0 0 419.0 23.0 59.0 169.0 54.0 4600.0 44.0

MA0493.3_rc_shift2 (KLF1_rc)
; oligos_6nt_mkv4_m4 versus MA0493.3_rc (KLF1_rc); m=14/25; ncol2=8; w=-1; offset=-1; strand=R; shift=2; score=0.458533; --CCmCrCCC--- ; cor=; Ncor= a 0 0 1.0 21.0 324.0 1.0 346.0 1.0 1.0 1.0 0 0 0 c 0 0 998.0 896.0 675.0 998.0 1.0 998.0 998.0 998.0 0 0 0 g 0 0 1.0 1.0 1.0 1.0 529.0 1.0 1.0 1.0 0 0 0 t 0 0 1.0 82.0 1.0 1.0 125.0 1.0 1.0 1.0 0 0 0

MA0006.2_rc_shift7 (Ahr::Arnt_rc)
; oligos_6nt_mkv4_m4 versus MA0006.2_rc (Ahr::Arnt_rc); m=15/25; ncol2=5; w=0; offset=4; strand=R; shift=7; score=0.457089; -------CACGC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.0 24.0 1.0 1.0 1.0 0 c 0 0 0 0 0 0 0 24.0 0.0 23.0 0.0 23.0 0 g 0 0 0 0 0 0 0 0.0 0.0 0.0 23.0 0.0 0 t 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 0.0 0

MA0622.2_shift7 (Mlxip)
; oligos_6nt_mkv4_m4 versus MA0622.2 (Mlxip); m=16/25; ncol2=6; w=0; offset=4; strand=D; shift=7; score=0.453286; -------CACGTG ; cor=; Ncor= a 0 0 0 0 0 0 0 0.0 999.0 0.0 0.0 0.0 0.0 c 0 0 0 0 0 0 0 999.0 0.0 999.0 0.0 0.0 0.0 g 0 0 0 0 0 0 0 0.0 0.0 0.0 999.0 0.0 999.0 t 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 999.0 0.0

MA0616.3_rc_shift6 (HES2_rc)
; oligos_6nt_mkv4_m4 versus MA0616.3_rc (HES2_rc); m=17/25; ncol2=9; w=0; offset=3; strand=R; shift=6; score=0.452628; ------rCACGTG ; cor=; Ncor= a 0 0 0 0 0 0 3849.0 0.0 8483.0 0.0 129.0 0.0 73.0 c 0 0 0 0 0 0 1289.0 8483.0 0.0 8483.0 0.0 2028.0 85.0 g 0 0 0 0 0 0 4634.0 15.0 1098.0 0.0 8483.0 0.0 8483.0 t 0 0 0 0 0 0 512.0 53.0 0.0 0.0 0.0 6455.0 118.0

MA0825.2_rc_shift7 (MNT_rc)
; oligos_6nt_mkv4_m4 versus MA0825.2_rc (MNT_rc); m=18/25; ncol2=6; w=0; offset=4; strand=R; shift=7; score=0.452455; -------CACGTG ; cor=; Ncor= a 0 0 0 0 0 0 0 25.0 681.0 0.0 16.0 21.0 5.0 c 0 0 0 0 0 0 0 681.0 15.0 681.0 7.0 0.0 0.0 g 0 0 0 0 0 0 0 0.0 0.0 0.0 681.0 0.0 681.0 t 0 0 0 0 0 0 0 0.0 0.0 15.0 0.0 681.0 27.0

MA0058.4_shift7 (MAX)
; oligos_6nt_mkv4_m4 versus MA0058.4 (MAX); m=19/25; ncol2=6; w=0; offset=4; strand=D; shift=7; score=0.45192; -------CACGTG ; cor=; Ncor= a 0 0 0 0 0 0 0 39.0 6876.0 0.0 329.0 69.0 0.0 c 0 0 0 0 0 0 0 6876.0 0.0 6876.0 39.0 159.0 27.0 g 0 0 0 0 0 0 0 0.0 87.0 7.0 6876.0 20.0 6876.0 t 0 0 0 0 0 0 0 0.0 38.0 229.0 19.0 6876.0 36.0

MA0464.3_rc_shift6 (BHLHE40_rc)
; oligos_6nt_mkv4_m4 versus MA0464.3_rc (BHLHE40_rc); m=20/25; ncol2=8; w=0; offset=3; strand=R; shift=6; score=0.450369; ------kCACGTG ; cor=; Ncor= a 0 0 0 0 0 0 500.0 72.0 11222.0 0.0 32.0 77.0 14.0 c 0 0 0 0 0 0 129.0 11222.0 87.0 11222.0 2.0 78.0 0.0 g 0 0 0 0 0 0 5295.0 12.0 248.0 30.0 11222.0 130.0 11222.0 t 0 0 0 0 0 0 5927.0 4.0 167.0 66.0 23.0 11222.0 59.0

MA0649.2_rc_shift6 (HEY2_rc)
; oligos_6nt_mkv4_m4 versus MA0649.2_rc (HEY2_rc); m=21/25; ncol2=9; w=0; offset=3; strand=R; shift=6; score=0.440562; ------rCACGTG ; cor=; Ncor= a 0 0 0 0 0 0 753.0 30.0 1800.0 0.0 0.0 0.0 58.0 c 0 0 0 0 0 0 128.0 1800.0 0.0 1800.0 0.0 128.0 83.0 g 0 0 0 0 0 0 1047.0 34.0 120.0 72.0 1800.0 0.0 1800.0 t 0 0 0 0 0 0 50.0 0.0 36.0 27.0 7.0 1800.0 84.0

MA0259.2_rc_shift7 (ARNT::HIF1A_rc)
; oligos_6nt_mkv4_m4 versus MA0259.2_rc (ARNT::HIF1A_rc); m=22/25; ncol2=5; w=0; offset=4; strand=R; shift=7; score=0.440373; -------CACGT- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.0 104.0 0.0 1.0 1.0 0 c 0 0 0 0 0 0 0 104.0 0.0 104.0 0.0 23.0 0 g 0 0 0 0 0 0 0 0.0 0.0 0.0 103.0 2.0 0 t 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 78.0 0

MA1099.3_rc_shift7 (HES1_rc)
; oligos_6nt_mkv4_m4 versus MA1099.3_rc (HES1_rc); m=23/25; ncol2=8; w=0; offset=4; strand=R; shift=7; score=0.431159; -------CACGyG ; cor=; Ncor= a 0 0 0 0 0 0 0 53.0 18526.0 0.0 791.0 232.0 18.0 c 0 0 0 0 0 0 0 18526.0 0.0 18526.0 0.0 9081.0 0.0 g 0 0 0 0 0 0 0 0.0 4057.0 0.0 18526.0 0.0 18526.0 t 0 0 0 0 0 0 0 1.0 253.0 21.0 0.0 9446.0 464.0

MA1516.2_shift0 (KLF3)
; oligos_6nt_mkv4_m4 versus MA1516.2 (KLF3); m=24/25; ncol2=10; w=-3; offset=-3; strand=D; shift=0; score=0.424634; grCCrCGCCC--- ; cor=; Ncor= a 7717.0 24771.0 1442.0 298.0 26757.0 2261.0 4245.0 202.0 83.0 77.0 0 0 0 c 2655.0 615.0 43259.0 43259.0 707.0 43259.0 334.0 43259.0 43259.0 43259.0 0 0 0 g 26568.0 18489.0 1954.0 248.0 16503.0 21.0 43259.0 31.0 29.0 48.0 0 0 0 t 6319.0 207.0 705.0 335.0 419.0 1409.0 1212.0 0.0 0.0 1218.0 0 0 0

MA1583.2_shift2 (ZFP57)
; oligos_6nt_mkv4_m4 versus MA1583.2 (ZFP57); m=25/25; ncol2=7; w=-1; offset=-1; strand=D; shift=2; score=0.409436; --TGCCGCA---- ; cor=; Ncor= a 0 0 12.0 24.0 26.0 11.0 91.0 38.0 5116.0 0 0 0 0 c 0 0 37.0 71.0 6254.0 5595.0 16.0 5828.0 331.0 0 0 0 0 g 0 0 140.0 6213.0 16.0 719.0 6166.0 279.0 729.0 0 0 0 0 t 0 0 6143.0 24.0 36.0 7.0 59.0 187.0 156.0 0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv4_m4_shift3 (oligos_6nt_mkv4_m4)				; oligos_6nt_mkv4_m4; m=0 (reference); ncol1=10; shift=3; ncol=13; ---srCGCaCGss ; Alignment reference a 0 0 0 469 863 68 219 80 1797 41 87 365 530 c 0 0 0 1350 736 3100 76 3047 650 3087 88 1525 1305 g 0 0 0 991 1359 80 2964 154 646 92 3102 897 1082 t 0 0 0 525 377 87 76 54 242 115 58 548 418
MA2325.1_shift5 (EPAS1)				; oligos_6nt_mkv4_m4 versus MA2325.1 (EPAS1); m=1/25; ncol2=9; w=0; offset=2; strand=D; shift=5; score=0.579609; -----cGCACGTm ; cor=; Ncor= a 0 0 0 0 0 73.0 28.0 1.0 620.0 2.0 7.0 5.0 410.0 c 0 0 0 0 0 352.0 23.0 635.0 4.0 629.0 2.0 36.0 174.0 g 0 0 0 0 0 115.0 545.0 1.0 15.0 6.0 626.0 16.0 43.0 t 0 0 0 0 0 100.0 44.0 3.0 1.0 3.0 5.0 583.0 13.0
MA0162.5_shift2 (EGR1)				; oligos_6nt_mkv4_m4 versus MA0162.5 (EGR1); m=2/25; ncol2=10; w=-1; offset=-1; strand=D; shift=2; score=0.578742; --mCGCCCACgC- ; cor=; Ncor= a 0 0 14508.0 642.0 5110.0 227.0 1440.0 314.0 22297.0 153.0 4696.0 969.0 0 c 0 0 10303.0 28403.0 1131.0 29338.0 27321.0 28958.0 5420.0 29507.0 2806.0 25196.0 0 g 0 0 3854.0 756.0 22237.0 665.0 1455.0 698.0 2122.0 699.0 20544.0 2157.0 0 t 0 0 1933.0 797.0 2120.0 368.0 382.0 628.0 759.0 239.0 2552.0 2276.0 0
MA0632.3_shift4 (TCFL5)				; oligos_6nt_mkv4_m4 versus MA0632.3 (TCFL5); m=3/25; ncol2=8; w=0; offset=1; strand=D; shift=4; score=0.561887; ----kCrCGCGC- ; cor=; Ncor= a 0 0 0 0 2810.0 0.0 72543.0 0.0 1566.0 1765.0 3520.0 1593.0 0 c 0 0 0 0 10582.0 72543.0 0.0 72543.0 0.0 57092.0 657.0 72543.0 0 g 0 0 0 0 22297.0 0.0 29710.0 0.0 72543.0 0.0 72543.0 4594.0 0 t 0 0 0 0 36854.0 0.0 9359.0 1643.0 0.0 15451.0 0.0 635.0 0
MA1650.2_shift2 (ZBTB14)				; oligos_6nt_mkv4_m4 versus MA1650.2 (ZBTB14); m=4/25; ncol2=8; w=-1; offset=-1; strand=D; shift=2; score=0.550141; --CCGCGCAC--- ; cor=; Ncor= a 0 0 335.0 41.0 93.0 68.0 132.0 56.0 4500.0 99.0 0 0 0 c 0 0 3525.0 4292.0 294.0 4078.0 305.0 4178.0 37.0 3674.0 0 0 0 g 0 0 614.0 155.0 4098.0 319.0 4043.0 261.0 10.0 651.0 0 0 0 t 0 0 73.0 59.0 62.0 82.0 67.0 52.0 0.0 123.0 0 0 0
MA0506.3_rc_shift4 (Nrf1_rc)				; oligos_6nt_mkv4_m4 versus MA0506.3_rc (Nrf1_rc); m=5/25; ncol2=12; w=0; offset=1; strand=R; shift=4; score=0.531355; ----gCGCAkGCG ; cor=; Ncor= a 0 0 0 0 2834.0 710.0 254.0 86.0 11578.0 408.0 234.0 224.0 195.0 c 0 0 0 0 1008.0 11169.0 201.0 12324.0 446.0 2514.0 510.0 12026.0 343.0 g 0 0 0 0 8461.0 576.0 12143.0 251.0 577.0 5475.0 11838.0 193.0 11783.0 t 0 0 0 0 426.0 274.0 131.0 68.0 128.0 4332.0 147.0 286.0 408.0
MA1959.2_rc_shift2 (KLF7_rc)				; oligos_6nt_mkv4_m4 versus MA1959.2_rc (KLF7_rc); m=6/25; ncol2=8; w=-1; offset=-1; strand=R; shift=2; score=0.495379; --CcMCGCCC--- ; cor=; Ncor= a 0 0 1.0 167.0 254.0 1.0 167.0 1.0 1.0 1.0 0 0 0 c 0 0 997.0 642.0 720.0 997.0 1.0 997.0 997.0 997.0 0 0 0 g 0 0 1.0 42.0 25.0 1.0 788.0 1.0 1.0 1.0 0 0 0 t 0 0 1.0 150.0 1.0 1.0 45.0 1.0 1.0 1.0 0 0 0
MA1106.2_rc_shift6 (HIF1A_rc)				; oligos_6nt_mkv4_m4 versus MA1106.2_rc (HIF1A_rc); m=7/25; ncol2=6; w=0; offset=3; strand=R; shift=6; score=0.494594; ------GCACGT- ; cor=; Ncor= a 0 0 0 0 0 0 35.0 11.0 934.0 0.0 1.0 2.0 0 c 0 0 0 0 0 0 20.0 844.0 11.0 979.0 0.0 2.0 0 g 0 0 0 0 0 0 837.0 41.0 33.0 0.0 979.0 0.0 0 t 0 0 0 0 0 0 88.0 84.0 2.0 1.0 0.0 976.0 0
MA1560.2_rc_shift6 (SOHLH2_rc)				; oligos_6nt_mkv4_m4 versus MA1560.2_rc (SOHLH2_rc); m=8/25; ncol2=8; w=0; offset=3; strand=R; shift=6; score=0.492212; ------gCACGTG ; cor=; Ncor= a 0 0 0 0 0 0 153.0 4.0 1212.0 15.0 7.0 0.0 70.0 c 0 0 0 0 0 0 172.0 1212.0 0.0 1212.0 11.0 41.0 29.0 g 0 0 0 0 0 0 1212.0 4.0 65.0 0.0 1212.0 0.0 1212.0 t 0 0 0 0 0 0 272.0 41.0 36.0 14.0 0.0 1212.0 45.0
MA1515.2_shift2 (KLF2)				; oligos_6nt_mkv4_m4 versus MA1515.2 (KLF2); m=9/25; ncol2=8; w=-1; offset=-1; strand=D; shift=2; score=0.484375; --CCmCrCCC--- ; cor=; Ncor= a 0 0 741.0 403.0 4622.0 0.0 1702.0 0.0 128.0 68.0 0 0 0 c 0 0 4622.0 4622.0 2265.0 4622.0 274.0 4622.0 4622.0 4622.0 0 0 0 g 0 0 495.0 186.0 1060.0 0.0 2920.0 49.0 195.0 105.0 0 0 0 t 0 0 346.0 312.0 214.0 78.0 167.0 22.0 9.0 444.0 0 0 0
MA2126.1_rc_shift2 (Zfp961_rc)				; oligos_6nt_mkv4_m4 versus MA2126.1_rc (Zfp961_rc); m=10/25; ncol2=8; w=-1; offset=-1; strand=R; shift=2; score=0.483126; --TGGCGCCC--- ; cor=; Ncor= a 0 0 61.0 26.0 16.0 15.0 182.0 116.0 71.0 8.0 0 0 0 c 0 0 69.0 30.0 23.0 1372.0 9.0 1278.0 1312.0 1372.0 0 0 0 g 0 0 74.0 1353.0 1367.0 8.0 1219.0 13.0 22.0 20.0 0 0 0 t 0 0 1214.0 9.0 12.0 23.0 8.0 11.0 13.0 18.0 0 0 0
MA1513.2_shift2 (KLF15)				; oligos_6nt_mkv4_m4 versus MA1513.2 (KLF15); m=11/25; ncol2=8; w=-1; offset=-1; strand=D; shift=2; score=0.480495; --cCCCGCCC--- ; cor=; Ncor= a 0 0 937.0 40.0 93.0 0.0 0.0 11.0 55.0 12.0 0 0 0 c 0 0 6506.0 11234.0 10940.0 11368.0 0.0 11345.0 10954.0 11254.0 0 0 0 g 0 0 2117.0 86.0 333.0 1.0 11369.0 2.0 359.0 100.0 0 0 0 t 0 0 1809.0 9.0 3.0 0.0 0.0 11.0 1.0 3.0 0 0 0
MA0004.1_rc_shift7 (Arnt_rc)				; oligos_6nt_mkv4_m4 versus MA0004.1_rc (Arnt_rc); m=12/25; ncol2=6; w=0; offset=4; strand=R; shift=7; score=0.47054; -------CACGTG ; cor=; Ncor= a 0 0 0 0 0 0 0 0.0 20.0 0.0 0.0 0.0 0.0 c 0 0 0 0 0 0 0 20.0 0.0 20.0 0.0 1.0 0.0 g 0 0 0 0 0 0 0 0.0 0.0 0.0 20.0 0.0 16.0 t 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 19.0 4.0
MA0147.4_rc_shift6 (MYC_rc)				; oligos_6nt_mkv4_m4 versus MA0147.4_rc (MYC_rc); m=13/25; ncol2=8; w=0; offset=3; strand=R; shift=6; score=0.469975; ------gCACGTG ; cor=; Ncor= a 0 0 0 0 0 0 524.0 46.0 4658.0 38.0 293.0 113.0 27.0 c 0 0 0 0 0 0 1198.0 4817.0 63.0 4578.0 70.0 170.0 31.0 g 0 0 0 0 0 0 2801.0 56.0 162.0 157.0 4525.0 59.0 4840.0 t 0 0 0 0 0 0 419.0 23.0 59.0 169.0 54.0 4600.0 44.0
MA0493.3_rc_shift2 (KLF1_rc)				; oligos_6nt_mkv4_m4 versus MA0493.3_rc (KLF1_rc); m=14/25; ncol2=8; w=-1; offset=-1; strand=R; shift=2; score=0.458533; --CCmCrCCC--- ; cor=; Ncor= a 0 0 1.0 21.0 324.0 1.0 346.0 1.0 1.0 1.0 0 0 0 c 0 0 998.0 896.0 675.0 998.0 1.0 998.0 998.0 998.0 0 0 0 g 0 0 1.0 1.0 1.0 1.0 529.0 1.0 1.0 1.0 0 0 0 t 0 0 1.0 82.0 1.0 1.0 125.0 1.0 1.0 1.0 0 0 0
MA0006.2_rc_shift7 (Ahr::Arnt_rc)				; oligos_6nt_mkv4_m4 versus MA0006.2_rc (Ahr::Arnt_rc); m=15/25; ncol2=5; w=0; offset=4; strand=R; shift=7; score=0.457089; -------CACGC- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.0 24.0 1.0 1.0 1.0 0 c 0 0 0 0 0 0 0 24.0 0.0 23.0 0.0 23.0 0 g 0 0 0 0 0 0 0 0.0 0.0 0.0 23.0 0.0 0 t 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 0.0 0
MA0622.2_shift7 (Mlxip)				; oligos_6nt_mkv4_m4 versus MA0622.2 (Mlxip); m=16/25; ncol2=6; w=0; offset=4; strand=D; shift=7; score=0.453286; -------CACGTG ; cor=; Ncor= a 0 0 0 0 0 0 0 0.0 999.0 0.0 0.0 0.0 0.0 c 0 0 0 0 0 0 0 999.0 0.0 999.0 0.0 0.0 0.0 g 0 0 0 0 0 0 0 0.0 0.0 0.0 999.0 0.0 999.0 t 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 999.0 0.0
MA0616.3_rc_shift6 (HES2_rc)				; oligos_6nt_mkv4_m4 versus MA0616.3_rc (HES2_rc); m=17/25; ncol2=9; w=0; offset=3; strand=R; shift=6; score=0.452628; ------rCACGTG ; cor=; Ncor= a 0 0 0 0 0 0 3849.0 0.0 8483.0 0.0 129.0 0.0 73.0 c 0 0 0 0 0 0 1289.0 8483.0 0.0 8483.0 0.0 2028.0 85.0 g 0 0 0 0 0 0 4634.0 15.0 1098.0 0.0 8483.0 0.0 8483.0 t 0 0 0 0 0 0 512.0 53.0 0.0 0.0 0.0 6455.0 118.0
MA0825.2_rc_shift7 (MNT_rc)				; oligos_6nt_mkv4_m4 versus MA0825.2_rc (MNT_rc); m=18/25; ncol2=6; w=0; offset=4; strand=R; shift=7; score=0.452455; -------CACGTG ; cor=; Ncor= a 0 0 0 0 0 0 0 25.0 681.0 0.0 16.0 21.0 5.0 c 0 0 0 0 0 0 0 681.0 15.0 681.0 7.0 0.0 0.0 g 0 0 0 0 0 0 0 0.0 0.0 0.0 681.0 0.0 681.0 t 0 0 0 0 0 0 0 0.0 0.0 15.0 0.0 681.0 27.0
MA0058.4_shift7 (MAX)				; oligos_6nt_mkv4_m4 versus MA0058.4 (MAX); m=19/25; ncol2=6; w=0; offset=4; strand=D; shift=7; score=0.45192; -------CACGTG ; cor=; Ncor= a 0 0 0 0 0 0 0 39.0 6876.0 0.0 329.0 69.0 0.0 c 0 0 0 0 0 0 0 6876.0 0.0 6876.0 39.0 159.0 27.0 g 0 0 0 0 0 0 0 0.0 87.0 7.0 6876.0 20.0 6876.0 t 0 0 0 0 0 0 0 0.0 38.0 229.0 19.0 6876.0 36.0
MA0464.3_rc_shift6 (BHLHE40_rc)				; oligos_6nt_mkv4_m4 versus MA0464.3_rc (BHLHE40_rc); m=20/25; ncol2=8; w=0; offset=3; strand=R; shift=6; score=0.450369; ------kCACGTG ; cor=; Ncor= a 0 0 0 0 0 0 500.0 72.0 11222.0 0.0 32.0 77.0 14.0 c 0 0 0 0 0 0 129.0 11222.0 87.0 11222.0 2.0 78.0 0.0 g 0 0 0 0 0 0 5295.0 12.0 248.0 30.0 11222.0 130.0 11222.0 t 0 0 0 0 0 0 5927.0 4.0 167.0 66.0 23.0 11222.0 59.0
MA0649.2_rc_shift6 (HEY2_rc)				; oligos_6nt_mkv4_m4 versus MA0649.2_rc (HEY2_rc); m=21/25; ncol2=9; w=0; offset=3; strand=R; shift=6; score=0.440562; ------rCACGTG ; cor=; Ncor= a 0 0 0 0 0 0 753.0 30.0 1800.0 0.0 0.0 0.0 58.0 c 0 0 0 0 0 0 128.0 1800.0 0.0 1800.0 0.0 128.0 83.0 g 0 0 0 0 0 0 1047.0 34.0 120.0 72.0 1800.0 0.0 1800.0 t 0 0 0 0 0 0 50.0 0.0 36.0 27.0 7.0 1800.0 84.0
MA0259.2_rc_shift7 (ARNT::HIF1A_rc)				; oligos_6nt_mkv4_m4 versus MA0259.2_rc (ARNT::HIF1A_rc); m=22/25; ncol2=5; w=0; offset=4; strand=R; shift=7; score=0.440373; -------CACGT- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.0 104.0 0.0 1.0 1.0 0 c 0 0 0 0 0 0 0 104.0 0.0 104.0 0.0 23.0 0 g 0 0 0 0 0 0 0 0.0 0.0 0.0 103.0 2.0 0 t 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 78.0 0
MA1099.3_rc_shift7 (HES1_rc)				; oligos_6nt_mkv4_m4 versus MA1099.3_rc (HES1_rc); m=23/25; ncol2=8; w=0; offset=4; strand=R; shift=7; score=0.431159; -------CACGyG ; cor=; Ncor= a 0 0 0 0 0 0 0 53.0 18526.0 0.0 791.0 232.0 18.0 c 0 0 0 0 0 0 0 18526.0 0.0 18526.0 0.0 9081.0 0.0 g 0 0 0 0 0 0 0 0.0 4057.0 0.0 18526.0 0.0 18526.0 t 0 0 0 0 0 0 0 1.0 253.0 21.0 0.0 9446.0 464.0
MA1516.2_shift0 (KLF3)				; oligos_6nt_mkv4_m4 versus MA1516.2 (KLF3); m=24/25; ncol2=10; w=-3; offset=-3; strand=D; shift=0; score=0.424634; grCCrCGCCC--- ; cor=; Ncor= a 7717.0 24771.0 1442.0 298.0 26757.0 2261.0 4245.0 202.0 83.0 77.0 0 0 0 c 2655.0 615.0 43259.0 43259.0 707.0 43259.0 334.0 43259.0 43259.0 43259.0 0 0 0 g 26568.0 18489.0 1954.0 248.0 16503.0 21.0 43259.0 31.0 29.0 48.0 0 0 0 t 6319.0 207.0 705.0 335.0 419.0 1409.0 1212.0 0.0 0.0 1218.0 0 0 0
MA1583.2_shift2 (ZFP57)				; oligos_6nt_mkv4_m4 versus MA1583.2 (ZFP57); m=25/25; ncol2=7; w=-1; offset=-1; strand=D; shift=2; score=0.409436; --TGCCGCA---- ; cor=; Ncor= a 0 0 12.0 24.0 26.0 11.0 91.0 38.0 5116.0 0 0 0 0 c 0 0 37.0 71.0 6254.0 5595.0 16.0 5828.0 331.0 0 0 0 0 g 0 0 140.0 6213.0 16.0 719.0 6166.0 279.0 729.0 0 0 0 0 t 0 0 6143.0 24.0 36.0 7.0 59.0 187.0 156.0 0 0 0 0