One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.115003_2026-01-05.115003_UARk68/results/discovered_motifs/oligos_7nt_mkv5_m1/peak-motifs_oligos_7nt_mkv5_m1.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.115003_2026-01-05.115003_UARk68/results/discovered_motifs/oligos_7nt_mkv5_m1/peak-motifs_oligos_7nt_mkv5_m1_vs_db_JASPAR2024_CORE_vertebrates_non-redundant

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv5_m1_shift2 ; 35 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv5_m1_shift2 (oligos_7nt_mkv5_m1)
; oligos_7nt_mkv5_m1; m=0 (reference); ncol1=12; shift=2; ncol=14; --srCCACACCcws ; Alignment reference a 0 0 956 1515 416 86 4069 68 3410 86 201 321 1480 743 c 0 0 1393 969 3734 4277 236 4267 132 4187 4131 2833 953 1358 g 0 0 1265 1305 182 54 92 86 708 141 75 326 829 1471 t 0 0 901 726 183 98 118 94 265 101 108 1035 1253 943

MA1107.3_shift3 (KLF9)
; oligos_7nt_mkv5_m1 versus MA1107.3 (KLF9); m=1/34; ncol2=11; w=0; offset=1; strand=D; shift=3; score=0.826632; ---gCCACACCCAC ; cor=; Ncor= a 0 0 0 2862.0 4664.0 287.0 21899.0 221.0 19187.0 224.0 2428.0 146.0 18837.0 792.0 c 0 0 0 4342.0 17839.0 24709.0 2559.0 24863.0 1070.0 24365.0 22117.0 24682.0 4339.0 20644.0 g 0 0 0 16852.0 1660.0 291.0 708.0 353.0 4340.0 735.0 605.0 205.0 852.0 1778.0 t 0 0 0 1523.0 1416.0 292.0 413.0 142.0 982.0 255.0 429.0 546.0 1551.0 2365.0

MA0746.3_shift3 (SP3)
; oligos_7nt_mkv5_m1 versus MA0746.3 (SP3); m=2/34; ncol2=11; w=0; offset=1; strand=D; shift=3; score=0.765988; ---rCCACGCCCmC ; cor=; Ncor= a 0 0 0 2146.0 664.0 160.0 5253.0 6.0 465.0 0.0 0.0 2.0 3430.0 556.0 c 0 0 0 531.0 6591.0 6591.0 1338.0 6591.0 0.0 6591.0 6591.0 6591.0 3160.0 5116.0 g 0 0 0 4445.0 226.0 54.0 2.0 0.0 6591.0 0.0 0.0 2.0 39.0 297.0 t 0 0 0 421.0 345.0 202.0 11.0 12.0 504.0 0.0 9.0 718.0 552.0 1475.0

MA0741.1_shift3 (KLF16)
; oligos_7nt_mkv5_m1 versus MA0741.1 (KLF16); m=3/34; ncol2=11; w=0; offset=1; strand=D; shift=3; score=0.750166; ---gmCMCgCCCMC ; cor=; Ncor= a 0 0 0 666.0 901.0 62.0 1150.0 66.0 497.0 8.0 2.0 16.0 437.0 32.0 c 0 0 0 535.0 1612.0 1612.0 461.0 1612.0 173.0 1612.0 1612.0 1612.0 1175.0 1612.0 g 0 0 0 1612.0 77.0 6.0 32.0 17.0 1612.0 0.0 8.0 3.0 19.0 23.0 t 0 0 0 240.0 116.0 45.0 0.0 19.0 403.0 0.0 0.0 97.0 40.0 370.0

MA1512.2_shift4 (KLF11)
; oligos_7nt_mkv5_m1 versus MA1512.2 (KLF11); m=4/34; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.712217; ----cCACGCCCmC ; cor=; Ncor= a 0 0 0 0 2022.0 650.0 8655.0 0.0 2426.0 11.0 1.0 0.0 4689.0 581.0 c 0 0 0 0 5549.0 8662.0 1289.0 9142.0 52.0 9161.0 9166.0 8941.0 4226.0 8403.0 g 0 0 0 0 401.0 156.0 115.0 0.0 8291.0 18.0 20.0 4.0 69.0 358.0 t 0 0 0 0 1192.0 506.0 27.0 38.0 349.0 23.0 7.0 885.0 761.0 1281.0

MA0599.1_shift3 (KLF5)
; oligos_7nt_mkv5_m1 versus MA0599.1 (KLF5); m=5/34; ncol2=10; w=0; offset=1; strand=D; shift=3; score=0.691559; ---gCCMCrCCCh- ; cor=; Ncor= a 0 0 0 1429.0 0.0 0.0 3477.0 0.0 5051.0 0.0 0.0 0.0 3915.0 0 c 0 0 0 2023.0 11900.0 12008.0 9569.0 13611.0 0.0 13611.0 13611.0 13135.0 5595.0 0 g 0 0 0 7572.0 0.0 0.0 0.0 0.0 5182.0 0.0 0.0 0.0 0.0 0 t 0 0 0 2587.0 1711.0 1603.0 565.0 0.0 3378.0 0.0 0.0 476.0 4101.0 0

MA1516.2_shift2 (KLF3)
; oligos_7nt_mkv5_m1 versus MA1516.2 (KLF3); m=6/34; ncol2=10; w=0; offset=0; strand=D; shift=2; score=0.68818; --grCCrCGCCC-- ; cor=; Ncor= a 0 0 7717.0 24771.0 1442.0 298.0 26757.0 2261.0 4245.0 202.0 83.0 77.0 0 0 c 0 0 2655.0 615.0 43259.0 43259.0 707.0 43259.0 334.0 43259.0 43259.0 43259.0 0 0 g 0 0 26568.0 18489.0 1954.0 248.0 16503.0 21.0 43259.0 31.0 29.0 48.0 0 0 t 0 0 6319.0 207.0 705.0 335.0 419.0 1409.0 1212.0 0.0 0.0 1218.0 0 0

MA1564.2_shift4 (SP9)
; oligos_7nt_mkv5_m1 versus MA1564.2 (SP9); m=7/34; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.683984; ----cCmCGCCCmc ; cor=; Ncor= a 0 0 0 0 566.0 321.0 2451.0 2.0 211.0 22.0 0.0 39.0 1192.0 188.0 c 0 0 0 0 2451.0 2451.0 1127.0 2451.0 200.0 2451.0 2451.0 2451.0 1259.0 1863.0 g 0 0 0 0 309.0 113.0 56.0 17.0 2451.0 0.0 0.0 24.0 38.0 191.0 t 0 0 0 0 518.0 284.0 96.0 9.0 173.0 14.0 30.0 412.0 353.0 588.0

MA1517.2_shift4 (KLF6)
; oligos_7nt_mkv5_m1 versus MA1517.2 (KLF6); m=8/34; ncol2=9; w=0; offset=2; strand=D; shift=4; score=0.677927; ----cCACRCCCm- ; cor=; Ncor= a 0 0 0 0 569.0 432.0 2192.0 0.0 1024.0 0.0 25.0 71.0 955.0 0 c 0 0 0 0 2192.0 2192.0 284.0 2192.0 0.0 2192.0 2192.0 2192.0 665.0 0 g 0 0 0 0 332.0 298.0 60.0 0.0 2192.0 0.0 60.0 12.0 52.0 0 t 0 0 0 0 219.0 140.0 60.0 24.0 0.0 0.0 0.0 64.0 520.0 0

MA0747.2_shift4 (SP8)
; oligos_7nt_mkv5_m1 versus MA0747.2 (SP8); m=9/34; ncol2=11; w=0; offset=2; strand=D; shift=4; score=0.647073; ----mCACgCCCmC ; cor=; Ncor= a 0 0 0 0 54.0 25.0 133.0 7.0 25.0 5.0 2.0 0.0 90.0 13.0 c 0 0 0 0 113.0 167.0 33.0 167.0 37.0 167.0 167.0 167.0 77.0 167.0 g 0 0 0 0 0.0 0.0 1.0 1.0 167.0 6.0 3.0 4.0 6.0 21.0 t 0 0 0 0 4.0 13.0 2.0 5.0 39.0 2.0 0.0 15.0 3.0 39.0

MA1515.2_shift4 (KLF2)
; oligos_7nt_mkv5_m1 versus MA1515.2 (KLF2); m=10/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.611322; ----CCmCrCCC-- ; cor=; Ncor= a 0 0 0 0 741.0 403.0 4622.0 0.0 1702.0 0.0 128.0 68.0 0 0 c 0 0 0 0 4622.0 4622.0 2265.0 4622.0 274.0 4622.0 4622.0 4622.0 0 0 g 0 0 0 0 495.0 186.0 1060.0 0.0 2920.0 49.0 195.0 105.0 0 0 t 0 0 0 0 346.0 312.0 214.0 78.0 167.0 22.0 9.0 444.0 0 0

MA0493.3_rc_shift4 (KLF1_rc)
; oligos_7nt_mkv5_m1 versus MA0493.3_rc (KLF1_rc); m=11/34; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.570308; ----CCmCrCCC-- ; cor=; Ncor= a 0 0 0 0 1.0 21.0 324.0 1.0 346.0 1.0 1.0 1.0 0 0 c 0 0 0 0 998.0 896.0 675.0 998.0 1.0 998.0 998.0 998.0 0 0 g 0 0 0 0 1.0 1.0 1.0 1.0 529.0 1.0 1.0 1.0 0 0 t 0 0 0 0 1.0 82.0 1.0 1.0 125.0 1.0 1.0 1.0 0 0

MA1511.2_rc_shift4 (KLF10_rc)
; oligos_7nt_mkv5_m1 versus MA1511.2_rc (KLF10_rc); m=12/34; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.56647; ----CCMCGCCCC- ; cor=; Ncor= a 0 0 0 0 49.3528 26.699 253.236 0.809061 152.913 0.809061 0.809061 0.809061 104.369 0 c 0 0 0 0 884.304 906.958 693.366 997.573 0.809061 997.573 997.573 997.573 819.579 0 g 0 0 0 0 0.809061 0.809061 52.589 0.809061 803.398 0.809061 0.809061 0.809061 0.809061 0 t 0 0 0 0 65.534 65.534 0.809061 0.809061 42.8803 0.809061 0.809061 0.809061 75.2427 0

MA0740.2_rc_shift4 (KLF14_rc)
; oligos_7nt_mkv5_m1 versus MA0740.2_rc (KLF14_rc); m=13/34; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.565469; ----CCMCGCCCm- ; cor=; Ncor= a 0 0 0 0 0.635877 0.635877 280.83 0.635877 90.067 0.635877 0.635877 0.635877 348.681 0 c 0 0 0 0 738.662 891.023 717.898 998.092 0.635877 998.092 998.092 998.092 619.525 0 g 0 0 0 0 62.0884 0.635877 0.635877 0.635877 814.392 0.635877 0.635877 0.635877 0.635877 0 t 0 0 0 0 198.614 107.705 0.635877 0.635877 94.9046 0.635877 0.635877 0.635877 31.158 0

MA0039.5_shift4 (KLF4)
; oligos_7nt_mkv5_m1 versus MA0039.5 (KLF4); m=14/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.561867; ----CCCCACCC-- ; cor=; Ncor= a 0 0 0 0 2465.0 2105.0 7021.0 1173.0 45602.0 852.0 1617.0 1202.0 0 0 c 0 0 0 0 49209.0 47865.0 45405.0 52875.0 161.0 52366.0 51112.0 51045.0 0 0 g 0 0 0 0 1583.0 1214.0 1422.0 793.0 6598.0 1470.0 1870.0 1005.0 0 0 t 0 0 0 0 2560.0 4633.0 1969.0 976.0 3456.0 1129.0 1218.0 2565.0 0 0

MA1567.3_rc_shift3 (Tbx6_rc)
; oligos_7nt_mkv5_m1 versus MA1567.3_rc (Tbx6_rc); m=15/34; ncol2=9; w=0; offset=1; strand=R; shift=3; score=0.549162; ---TTCACACCy-- ; cor=; Ncor= a 0 0 0 373.0 92.0 457.0 8037.0 101.0 9113.0 71.0 361.0 1500.0 0 0 c 0 0 0 898.0 332.0 8237.0 676.0 9393.0 152.0 9131.0 8347.0 2541.0 0 0 g 0 0 0 492.0 165.0 775.0 229.0 119.0 229.0 347.0 186.0 643.0 0 0 t 0 0 0 7889.0 9063.0 183.0 710.0 39.0 158.0 103.0 758.0 4968.0 0 0

MA2123.1_shift3 (Hand1)
; oligos_7nt_mkv5_m1 versus MA2123.1 (Hand1); m=16/34; ncol2=9; w=0; offset=1; strand=D; shift=3; score=0.547906; ---tCCAGACCt-- ; cor=; Ncor= a 0 0 0 177.0 84.0 8.0 1016.0 8.0 908.0 28.0 40.0 153.0 0 0 c 0 0 0 128.0 850.0 1036.0 16.0 24.0 33.0 955.0 962.0 235.0 0 0 g 0 0 0 148.0 101.0 12.0 10.0 1016.0 104.0 46.0 46.0 61.0 0 0 t 0 0 0 609.0 27.0 6.0 20.0 14.0 17.0 33.0 14.0 613.0 0 0

MA0742.2_rc_shift4 (KLF12_rc)
; oligos_7nt_mkv5_m1 versus MA0742.2_rc (KLF12_rc); m=17/34; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.545336; ----CCCCGCCCC- ; cor=; Ncor= a 0 0 0 0 29.2208 0.649351 190.26 0.649351 0.649351 0.649351 0.649351 0.649351 187.662 0 c 0 0 0 0 969.481 930.519 725.325 998.052 0.649351 998.052 998.052 912.338 709.74 0 g 0 0 0 0 0.649351 0.649351 78.5714 0.649351 951.299 0.649351 0.649351 0.649351 0.649351 0 t 0 0 0 0 0.649351 68.1818 5.84416 0.649351 47.4026 0.649351 0.649351 86.3636 101.948 0

MA0657.2_shift2 (KLF13)
; oligos_7nt_mkv5_m1 versus MA0657.2 (KLF13); m=18/34; ncol2=17; w=0; offset=0; strand=D; shift=2; score=0.526081; --tRmCACGCCCCY ; cor=; Ncor= a 0 0 733.0 1891.0 496.0 75.0 2384.0 0.0 24.0 0.0 4.0 1.0 509.0 3.0 c 0 0 46.0 0.0 923.0 924.0 0.0 1353.0 2.0 1596.0 1469.0 1760.0 1766.0 638.0 g 0 0 796.0 4630.0 58.0 2.0 11.0 7.0 3028.0 0.0 0.0 0.0 0.0 3.0 t 0 0 1766.0 59.0 102.0 61.0 0.0 3.0 9.0 7.0 0.0 16.0 10.0 1403.0

MA0800.2_rc_shift3 (EOMES_rc)
; oligos_7nt_mkv5_m1 versus MA0800.2_rc (EOMES_rc); m=19/34; ncol2=9; w=0; offset=1; strand=R; shift=3; score=0.525865; ---tTCACACCT-- ; cor=; Ncor= a 0 0 0 3351.0 24.0 980.0 9832.0 3.0 9832.0 94.0 1305.0 653.0 0 0 c 0 0 0 1022.0 99.0 9832.0 98.0 9832.0 50.0 9832.0 9832.0 1259.0 0 0 g 0 0 0 1956.0 28.0 550.0 1540.0 8.0 600.0 92.0 1004.0 158.0 0 0 t 0 0 0 9832.0 9832.0 210.0 495.0 9.0 19.0 23.0 1775.0 9832.0 0 0

MA1959.2_rc_shift4 (KLF7_rc)
; oligos_7nt_mkv5_m1 versus MA1959.2_rc (KLF7_rc); m=20/34; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.515048; ----CcMCGCCC-- ; cor=; Ncor= a 0 0 0 0 1.0 167.0 254.0 1.0 167.0 1.0 1.0 1.0 0 0 c 0 0 0 0 997.0 642.0 720.0 997.0 1.0 997.0 997.0 997.0 0 0 g 0 0 0 0 1.0 42.0 25.0 1.0 788.0 1.0 1.0 1.0 0 0 t 0 0 0 0 1.0 150.0 1.0 1.0 45.0 1.0 1.0 1.0 0 0

MA0807.1_rc_shift4 (TBX5_rc)
; oligos_7nt_mkv5_m1 versus MA0807.1_rc (TBX5_rc); m=21/34; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.510876; ----TmACACCT-- ; cor=; Ncor= a 0 0 0 0 283.0 915.0 1804.0 0.0 1804.0 28.0 133.0 207.0 0 0 c 0 0 0 0 343.0 1804.0 201.0 1804.0 166.0 1804.0 1804.0 409.0 0 0 g 0 0 0 0 76.0 616.0 225.0 0.0 131.0 0.0 190.0 89.0 0 0 t 0 0 0 0 1804.0 126.0 162.0 27.0 45.0 0.0 235.0 1804.0 0 0

MA0801.1_rc_shift4 (MGA_rc)
; oligos_7nt_mkv5_m1 versus MA0801.1_rc (MGA_rc); m=22/34; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.504099; ----TCACACCT-- ; cor=; Ncor= a 0 0 0 0 274.0 6465.0 30489.0 11.0 30489.0 104.0 1929.0 4160.0 0 0 c 0 0 0 0 920.0 30489.0 381.0 30489.0 96.0 30489.0 30489.0 8873.0 0 0 g 0 0 0 0 110.0 1753.0 3089.0 1.0 3534.0 509.0 3737.0 1151.0 0 0 t 0 0 0 0 30489.0 689.0 1042.0 14.0 12.0 16.0 4310.0 30489.0 0 0

MA0803.1_rc_shift4 (TBX15_rc)
; oligos_7nt_mkv5_m1 versus MA0803.1_rc (TBX15_rc); m=23/34; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.498582; ----TCACACCT-- ; cor=; Ncor= a 0 0 0 0 96.0 937.0 10502.0 0.0 10502.0 0.0 103.0 112.0 0 0 c 0 0 0 0 306.0 10502.0 324.0 10502.0 245.0 10502.0 10502.0 664.0 0 0 g 0 0 0 0 71.0 454.0 435.0 8.0 175.0 7.0 101.0 74.0 0 0 t 0 0 0 0 10502.0 44.0 140.0 0.0 61.0 19.0 458.0 10502.0 0 0

MA0805.1_rc_shift4 (TBX1_rc)
; oligos_7nt_mkv5_m1 versus MA0805.1_rc (TBX1_rc); m=24/34; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.488792; ----TCACACCT-- ; cor=; Ncor= a 0 0 0 0 0.0 1039.0 11931.0 0.0 11931.0 0.0 669.0 564.0 0 0 c 0 0 0 0 18.0 11931.0 109.0 11931.0 141.0 11931.0 11931.0 1007.0 0 0 g 0 0 0 0 33.0 720.0 613.0 5.0 214.0 0.0 711.0 113.0 0 0 t 0 0 0 0 11931.0 141.0 142.0 0.0 28.0 0.0 1560.0 11931.0 0 0

MA0806.1_rc_shift4 (TBX4_rc)
; oligos_7nt_mkv5_m1 versus MA0806.1_rc (TBX4_rc); m=25/34; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.482421; ----TcACACCT-- ; cor=; Ncor= a 0 0 0 0 965.0 8384.0 18646.0 0.0 18646.0 33.0 1162.0 1283.0 0 0 c 0 0 0 0 1733.0 18646.0 304.0 18646.0 191.0 18646.0 18646.0 2353.0 0 0 g 0 0 0 0 588.0 5396.0 2859.0 0.0 1644.0 189.0 2328.0 437.0 0 0 t 0 0 0 0 18646.0 1355.0 1551.0 0.0 0.0 38.0 3082.0 18646.0 0 0

MA0002.3_rc_shift1 (Runx1_rc)
; oligos_7nt_mkv5_m1 versus MA0002.3_rc (Runx1_rc); m=26/34; ncol2=9; w=-1; offset=-1; strand=R; shift=1; score=0.47638; -waaCCACAr---- ; cor=; Ncor= a 0 1053.0 1325.0 1339.0 93.0 13.0 1716.0 53.0 1936.0 656.0 0 0 0 0 c 0 289.0 81.0 251.0 1848.0 1987.0 70.0 1872.0 7.0 149.0 0 0 0 0 g 0 158.0 463.0 400.0 42.0 0.0 127.0 75.0 0.0 1072.0 0 0 0 0 t 0 500.0 131.0 10.0 17.0 0.0 87.0 0.0 57.0 123.0 0 0 0 0

MA1620.2_shift6 (Ptf1A)
; oligos_7nt_mkv5_m1 versus MA1620.2 (Ptf1A); m=27/34; ncol2=8; w=0; offset=4; strand=D; shift=6; score=0.473434; ------aCACCTGt ; cor=; Ncor= a 0 0 0 0 0 0 6867.0 184.0 10033.0 116.0 256.0 85.0 68.0 527.0 c 0 0 0 0 0 0 1188.0 9887.0 60.0 8567.0 9612.0 94.0 109.0 1615.0 g 0 0 0 0 0 0 1410.0 113.0 84.0 1182.0 294.0 98.0 9972.0 1516.0 t 0 0 0 0 0 0 826.0 107.0 114.0 426.0 129.0 10014.0 142.0 6633.0

MA0130.1_shift2 (ZNF354C)
; oligos_7nt_mkv5_m1 versus MA0130.1 (ZNF354C); m=28/34; ncol2=6; w=0; offset=0; strand=D; shift=2; score=0.456875; --mTCCAC------ ; cor=; Ncor= a 0 0 7.0 3.0 0.0 0.0 16.0 0.0 0 0 0 0 0 0 c 0 0 6.0 2.0 16.0 16.0 0.0 15.0 0 0 0 0 0 0 g 0 0 3.0 0.0 0.0 0.0 0.0 1.0 0 0 0 0 0 0 t 0 0 0.0 11.0 0.0 0.0 0.0 0.0 0 0 0 0 0 0

MA1989.2_shift1 (Bcl11B)
; oligos_7nt_mkv5_m1 versus MA1989.2 (Bcl11B); m=29/34; ncol2=9; w=-1; offset=-1; strand=D; shift=1; score=0.450432; -aAACCACAa---- ; cor=; Ncor= a 0 24743.0 31408.0 36130.0 1391.0 1058.0 36734.0 1718.0 36053.0 23689.0 0 0 0 0 c 0 5084.0 2339.0 1397.0 36798.0 37476.0 940.0 35985.0 1397.0 3546.0 0 0 0 0 g 0 3712.0 3044.0 1662.0 762.0 416.0 796.0 1217.0 1246.0 7120.0 0 0 0 0 t 0 6252.0 3000.0 602.0 840.0 841.0 1321.0 871.0 1095.0 5436.0 0 0 0 0

MA0162.5_shift0 (EGR1)
; oligos_7nt_mkv5_m1 versus MA0162.5 (EGR1); m=30/34; ncol2=10; w=-2; offset=-2; strand=D; shift=0; score=0.432959; mCGCCCACgC---- ; cor=; Ncor= a 14508.0 642.0 5110.0 227.0 1440.0 314.0 22297.0 153.0 4696.0 969.0 0 0 0 0 c 10303.0 28403.0 1131.0 29338.0 27321.0 28958.0 5420.0 29507.0 2806.0 25196.0 0 0 0 0 g 3854.0 756.0 22237.0 665.0 1455.0 698.0 2122.0 699.0 20544.0 2157.0 0 0 0 0 t 1933.0 797.0 2120.0 368.0 382.0 628.0 759.0 239.0 2552.0 2276.0 0 0 0 0

MA1558.2_rc_shift7 (SNAI1_rc)
; oligos_7nt_mkv5_m1 versus MA1558.2_rc (SNAI1_rc); m=31/34; ncol2=7; w=0; offset=5; strand=R; shift=7; score=0.423679; -------CACCTGy ; cor=; Ncor= a 0 0 0 0 0 0 0 311.0 19982.0 28.0 306.0 568.0 340.0 3518.0 c 0 0 0 0 0 0 0 19982.0 42.0 19982.0 19982.0 91.0 275.0 12989.0 g 0 0 0 0 0 0 0 0.0 0.0 5.0 517.0 297.0 19982.0 501.0 t 0 0 0 0 0 0 0 706.0 38.0 72.0 1766.0 19982.0 446.0 6993.0

MA1648.2_shift7 (TCF12)
; oligos_7nt_mkv5_m1 versus MA1648.2 (TCF12); m=32/34; ncol2=7; w=0; offset=5; strand=D; shift=7; score=0.415883; -------CACCTGC ; cor=; Ncor= a 0 0 0 0 0 0 0 955.0 52529.0 744.0 1913.0 1380.0 2819.0 1089.0 c 0 0 0 0 0 0 0 57848.0 2007.0 55598.0 55765.0 3886.0 2088.0 55061.0 g 0 0 0 0 0 0 0 1186.0 5607.0 3780.0 3536.0 2625.0 55922.0 2314.0 t 0 0 0 0 0 0 0 1887.0 1733.0 1754.0 662.0 53985.0 1047.0 3412.0

MA0522.4_shift7 (TCF3)
; oligos_7nt_mkv5_m1 versus MA0522.4 (TCF3); m=33/34; ncol2=7; w=0; offset=5; strand=D; shift=7; score=0.413662; -------CACCTGC ; cor=; Ncor= a 0 0 0 0 0 0 0 469.0 28916.0 309.0 1127.0 380.0 1089.0 295.0 c 0 0 0 0 0 0 0 29379.0 396.0 28640.0 27199.0 2003.0 1038.0 28742.0 g 0 0 0 0 0 0 0 708.0 1574.0 1362.0 2652.0 1339.0 28642.0 987.0 t 0 0 0 0 0 0 0 705.0 375.0 950.0 283.0 27539.0 492.0 1237.0

MA0479.2_shift1 (FOXH1)
; oligos_7nt_mkv5_m1 versus MA0479.2 (FOXH1); m=34/34; ncol2=8; w=-1; offset=-1; strand=D; shift=1; score=0.407834; -AATMCACA----- ; cor=; Ncor= a 0 8211.0 7547.0 0.0 2374.0 1414.0 8211.0 0.0 7138.0 0 0 0 0 0 c 0 0.0 0.0 0.0 5773.0 6797.0 0.0 8211.0 0.0 0 0 0 0 0 g 0 0.0 229.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0 0 0 0 t 0 0.0 435.0 8211.0 64.0 0.0 0.0 0.0 1073.0 0 0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_7nt_mkv5_m1_shift2 (oligos_7nt_mkv5_m1)				; oligos_7nt_mkv5_m1; m=0 (reference); ncol1=12; shift=2; ncol=14; --srCCACACCcws ; Alignment reference a 0 0 956 1515 416 86 4069 68 3410 86 201 321 1480 743 c 0 0 1393 969 3734 4277 236 4267 132 4187 4131 2833 953 1358 g 0 0 1265 1305 182 54 92 86 708 141 75 326 829 1471 t 0 0 901 726 183 98 118 94 265 101 108 1035 1253 943
MA1107.3_shift3 (KLF9)				; oligos_7nt_mkv5_m1 versus MA1107.3 (KLF9); m=1/34; ncol2=11; w=0; offset=1; strand=D; shift=3; score=0.826632; ---gCCACACCCAC ; cor=; Ncor= a 0 0 0 2862.0 4664.0 287.0 21899.0 221.0 19187.0 224.0 2428.0 146.0 18837.0 792.0 c 0 0 0 4342.0 17839.0 24709.0 2559.0 24863.0 1070.0 24365.0 22117.0 24682.0 4339.0 20644.0 g 0 0 0 16852.0 1660.0 291.0 708.0 353.0 4340.0 735.0 605.0 205.0 852.0 1778.0 t 0 0 0 1523.0 1416.0 292.0 413.0 142.0 982.0 255.0 429.0 546.0 1551.0 2365.0
MA0746.3_shift3 (SP3)				; oligos_7nt_mkv5_m1 versus MA0746.3 (SP3); m=2/34; ncol2=11; w=0; offset=1; strand=D; shift=3; score=0.765988; ---rCCACGCCCmC ; cor=; Ncor= a 0 0 0 2146.0 664.0 160.0 5253.0 6.0 465.0 0.0 0.0 2.0 3430.0 556.0 c 0 0 0 531.0 6591.0 6591.0 1338.0 6591.0 0.0 6591.0 6591.0 6591.0 3160.0 5116.0 g 0 0 0 4445.0 226.0 54.0 2.0 0.0 6591.0 0.0 0.0 2.0 39.0 297.0 t 0 0 0 421.0 345.0 202.0 11.0 12.0 504.0 0.0 9.0 718.0 552.0 1475.0
MA0741.1_shift3 (KLF16)				; oligos_7nt_mkv5_m1 versus MA0741.1 (KLF16); m=3/34; ncol2=11; w=0; offset=1; strand=D; shift=3; score=0.750166; ---gmCMCgCCCMC ; cor=; Ncor= a 0 0 0 666.0 901.0 62.0 1150.0 66.0 497.0 8.0 2.0 16.0 437.0 32.0 c 0 0 0 535.0 1612.0 1612.0 461.0 1612.0 173.0 1612.0 1612.0 1612.0 1175.0 1612.0 g 0 0 0 1612.0 77.0 6.0 32.0 17.0 1612.0 0.0 8.0 3.0 19.0 23.0 t 0 0 0 240.0 116.0 45.0 0.0 19.0 403.0 0.0 0.0 97.0 40.0 370.0
MA1512.2_shift4 (KLF11)				; oligos_7nt_mkv5_m1 versus MA1512.2 (KLF11); m=4/34; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.712217; ----cCACGCCCmC ; cor=; Ncor= a 0 0 0 0 2022.0 650.0 8655.0 0.0 2426.0 11.0 1.0 0.0 4689.0 581.0 c 0 0 0 0 5549.0 8662.0 1289.0 9142.0 52.0 9161.0 9166.0 8941.0 4226.0 8403.0 g 0 0 0 0 401.0 156.0 115.0 0.0 8291.0 18.0 20.0 4.0 69.0 358.0 t 0 0 0 0 1192.0 506.0 27.0 38.0 349.0 23.0 7.0 885.0 761.0 1281.0
MA0599.1_shift3 (KLF5)				; oligos_7nt_mkv5_m1 versus MA0599.1 (KLF5); m=5/34; ncol2=10; w=0; offset=1; strand=D; shift=3; score=0.691559; ---gCCMCrCCCh- ; cor=; Ncor= a 0 0 0 1429.0 0.0 0.0 3477.0 0.0 5051.0 0.0 0.0 0.0 3915.0 0 c 0 0 0 2023.0 11900.0 12008.0 9569.0 13611.0 0.0 13611.0 13611.0 13135.0 5595.0 0 g 0 0 0 7572.0 0.0 0.0 0.0 0.0 5182.0 0.0 0.0 0.0 0.0 0 t 0 0 0 2587.0 1711.0 1603.0 565.0 0.0 3378.0 0.0 0.0 476.0 4101.0 0
MA1516.2_shift2 (KLF3)				; oligos_7nt_mkv5_m1 versus MA1516.2 (KLF3); m=6/34; ncol2=10; w=0; offset=0; strand=D; shift=2; score=0.68818; --grCCrCGCCC-- ; cor=; Ncor= a 0 0 7717.0 24771.0 1442.0 298.0 26757.0 2261.0 4245.0 202.0 83.0 77.0 0 0 c 0 0 2655.0 615.0 43259.0 43259.0 707.0 43259.0 334.0 43259.0 43259.0 43259.0 0 0 g 0 0 26568.0 18489.0 1954.0 248.0 16503.0 21.0 43259.0 31.0 29.0 48.0 0 0 t 0 0 6319.0 207.0 705.0 335.0 419.0 1409.0 1212.0 0.0 0.0 1218.0 0 0
MA1564.2_shift4 (SP9)				; oligos_7nt_mkv5_m1 versus MA1564.2 (SP9); m=7/34; ncol2=10; w=0; offset=2; strand=D; shift=4; score=0.683984; ----cCmCGCCCmc ; cor=; Ncor= a 0 0 0 0 566.0 321.0 2451.0 2.0 211.0 22.0 0.0 39.0 1192.0 188.0 c 0 0 0 0 2451.0 2451.0 1127.0 2451.0 200.0 2451.0 2451.0 2451.0 1259.0 1863.0 g 0 0 0 0 309.0 113.0 56.0 17.0 2451.0 0.0 0.0 24.0 38.0 191.0 t 0 0 0 0 518.0 284.0 96.0 9.0 173.0 14.0 30.0 412.0 353.0 588.0
MA1517.2_shift4 (KLF6)				; oligos_7nt_mkv5_m1 versus MA1517.2 (KLF6); m=8/34; ncol2=9; w=0; offset=2; strand=D; shift=4; score=0.677927; ----cCACRCCCm- ; cor=; Ncor= a 0 0 0 0 569.0 432.0 2192.0 0.0 1024.0 0.0 25.0 71.0 955.0 0 c 0 0 0 0 2192.0 2192.0 284.0 2192.0 0.0 2192.0 2192.0 2192.0 665.0 0 g 0 0 0 0 332.0 298.0 60.0 0.0 2192.0 0.0 60.0 12.0 52.0 0 t 0 0 0 0 219.0 140.0 60.0 24.0 0.0 0.0 0.0 64.0 520.0 0
MA0747.2_shift4 (SP8)				; oligos_7nt_mkv5_m1 versus MA0747.2 (SP8); m=9/34; ncol2=11; w=0; offset=2; strand=D; shift=4; score=0.647073; ----mCACgCCCmC ; cor=; Ncor= a 0 0 0 0 54.0 25.0 133.0 7.0 25.0 5.0 2.0 0.0 90.0 13.0 c 0 0 0 0 113.0 167.0 33.0 167.0 37.0 167.0 167.0 167.0 77.0 167.0 g 0 0 0 0 0.0 0.0 1.0 1.0 167.0 6.0 3.0 4.0 6.0 21.0 t 0 0 0 0 4.0 13.0 2.0 5.0 39.0 2.0 0.0 15.0 3.0 39.0
MA1515.2_shift4 (KLF2)				; oligos_7nt_mkv5_m1 versus MA1515.2 (KLF2); m=10/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.611322; ----CCmCrCCC-- ; cor=; Ncor= a 0 0 0 0 741.0 403.0 4622.0 0.0 1702.0 0.0 128.0 68.0 0 0 c 0 0 0 0 4622.0 4622.0 2265.0 4622.0 274.0 4622.0 4622.0 4622.0 0 0 g 0 0 0 0 495.0 186.0 1060.0 0.0 2920.0 49.0 195.0 105.0 0 0 t 0 0 0 0 346.0 312.0 214.0 78.0 167.0 22.0 9.0 444.0 0 0
MA0493.3_rc_shift4 (KLF1_rc)				; oligos_7nt_mkv5_m1 versus MA0493.3_rc (KLF1_rc); m=11/34; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.570308; ----CCmCrCCC-- ; cor=; Ncor= a 0 0 0 0 1.0 21.0 324.0 1.0 346.0 1.0 1.0 1.0 0 0 c 0 0 0 0 998.0 896.0 675.0 998.0 1.0 998.0 998.0 998.0 0 0 g 0 0 0 0 1.0 1.0 1.0 1.0 529.0 1.0 1.0 1.0 0 0 t 0 0 0 0 1.0 82.0 1.0 1.0 125.0 1.0 1.0 1.0 0 0
MA1511.2_rc_shift4 (KLF10_rc)				; oligos_7nt_mkv5_m1 versus MA1511.2_rc (KLF10_rc); m=12/34; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.56647; ----CCMCGCCCC- ; cor=; Ncor= a 0 0 0 0 49.3528 26.699 253.236 0.809061 152.913 0.809061 0.809061 0.809061 104.369 0 c 0 0 0 0 884.304 906.958 693.366 997.573 0.809061 997.573 997.573 997.573 819.579 0 g 0 0 0 0 0.809061 0.809061 52.589 0.809061 803.398 0.809061 0.809061 0.809061 0.809061 0 t 0 0 0 0 65.534 65.534 0.809061 0.809061 42.8803 0.809061 0.809061 0.809061 75.2427 0
MA0740.2_rc_shift4 (KLF14_rc)				; oligos_7nt_mkv5_m1 versus MA0740.2_rc (KLF14_rc); m=13/34; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.565469; ----CCMCGCCCm- ; cor=; Ncor= a 0 0 0 0 0.635877 0.635877 280.83 0.635877 90.067 0.635877 0.635877 0.635877 348.681 0 c 0 0 0 0 738.662 891.023 717.898 998.092 0.635877 998.092 998.092 998.092 619.525 0 g 0 0 0 0 62.0884 0.635877 0.635877 0.635877 814.392 0.635877 0.635877 0.635877 0.635877 0 t 0 0 0 0 198.614 107.705 0.635877 0.635877 94.9046 0.635877 0.635877 0.635877 31.158 0
MA0039.5_shift4 (KLF4)				; oligos_7nt_mkv5_m1 versus MA0039.5 (KLF4); m=14/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.561867; ----CCCCACCC-- ; cor=; Ncor= a 0 0 0 0 2465.0 2105.0 7021.0 1173.0 45602.0 852.0 1617.0 1202.0 0 0 c 0 0 0 0 49209.0 47865.0 45405.0 52875.0 161.0 52366.0 51112.0 51045.0 0 0 g 0 0 0 0 1583.0 1214.0 1422.0 793.0 6598.0 1470.0 1870.0 1005.0 0 0 t 0 0 0 0 2560.0 4633.0 1969.0 976.0 3456.0 1129.0 1218.0 2565.0 0 0
MA1567.3_rc_shift3 (Tbx6_rc)				; oligos_7nt_mkv5_m1 versus MA1567.3_rc (Tbx6_rc); m=15/34; ncol2=9; w=0; offset=1; strand=R; shift=3; score=0.549162; ---TTCACACCy-- ; cor=; Ncor= a 0 0 0 373.0 92.0 457.0 8037.0 101.0 9113.0 71.0 361.0 1500.0 0 0 c 0 0 0 898.0 332.0 8237.0 676.0 9393.0 152.0 9131.0 8347.0 2541.0 0 0 g 0 0 0 492.0 165.0 775.0 229.0 119.0 229.0 347.0 186.0 643.0 0 0 t 0 0 0 7889.0 9063.0 183.0 710.0 39.0 158.0 103.0 758.0 4968.0 0 0
MA2123.1_shift3 (Hand1)				; oligos_7nt_mkv5_m1 versus MA2123.1 (Hand1); m=16/34; ncol2=9; w=0; offset=1; strand=D; shift=3; score=0.547906; ---tCCAGACCt-- ; cor=; Ncor= a 0 0 0 177.0 84.0 8.0 1016.0 8.0 908.0 28.0 40.0 153.0 0 0 c 0 0 0 128.0 850.0 1036.0 16.0 24.0 33.0 955.0 962.0 235.0 0 0 g 0 0 0 148.0 101.0 12.0 10.0 1016.0 104.0 46.0 46.0 61.0 0 0 t 0 0 0 609.0 27.0 6.0 20.0 14.0 17.0 33.0 14.0 613.0 0 0
MA0742.2_rc_shift4 (KLF12_rc)				; oligos_7nt_mkv5_m1 versus MA0742.2_rc (KLF12_rc); m=17/34; ncol2=9; w=0; offset=2; strand=R; shift=4; score=0.545336; ----CCCCGCCCC- ; cor=; Ncor= a 0 0 0 0 29.2208 0.649351 190.26 0.649351 0.649351 0.649351 0.649351 0.649351 187.662 0 c 0 0 0 0 969.481 930.519 725.325 998.052 0.649351 998.052 998.052 912.338 709.74 0 g 0 0 0 0 0.649351 0.649351 78.5714 0.649351 951.299 0.649351 0.649351 0.649351 0.649351 0 t 0 0 0 0 0.649351 68.1818 5.84416 0.649351 47.4026 0.649351 0.649351 86.3636 101.948 0
MA0657.2_shift2 (KLF13)				; oligos_7nt_mkv5_m1 versus MA0657.2 (KLF13); m=18/34; ncol2=17; w=0; offset=0; strand=D; shift=2; score=0.526081; --tRmCACGCCCCY ; cor=; Ncor= a 0 0 733.0 1891.0 496.0 75.0 2384.0 0.0 24.0 0.0 4.0 1.0 509.0 3.0 c 0 0 46.0 0.0 923.0 924.0 0.0 1353.0 2.0 1596.0 1469.0 1760.0 1766.0 638.0 g 0 0 796.0 4630.0 58.0 2.0 11.0 7.0 3028.0 0.0 0.0 0.0 0.0 3.0 t 0 0 1766.0 59.0 102.0 61.0 0.0 3.0 9.0 7.0 0.0 16.0 10.0 1403.0
MA0800.2_rc_shift3 (EOMES_rc)				; oligos_7nt_mkv5_m1 versus MA0800.2_rc (EOMES_rc); m=19/34; ncol2=9; w=0; offset=1; strand=R; shift=3; score=0.525865; ---tTCACACCT-- ; cor=; Ncor= a 0 0 0 3351.0 24.0 980.0 9832.0 3.0 9832.0 94.0 1305.0 653.0 0 0 c 0 0 0 1022.0 99.0 9832.0 98.0 9832.0 50.0 9832.0 9832.0 1259.0 0 0 g 0 0 0 1956.0 28.0 550.0 1540.0 8.0 600.0 92.0 1004.0 158.0 0 0 t 0 0 0 9832.0 9832.0 210.0 495.0 9.0 19.0 23.0 1775.0 9832.0 0 0
MA1959.2_rc_shift4 (KLF7_rc)				; oligos_7nt_mkv5_m1 versus MA1959.2_rc (KLF7_rc); m=20/34; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.515048; ----CcMCGCCC-- ; cor=; Ncor= a 0 0 0 0 1.0 167.0 254.0 1.0 167.0 1.0 1.0 1.0 0 0 c 0 0 0 0 997.0 642.0 720.0 997.0 1.0 997.0 997.0 997.0 0 0 g 0 0 0 0 1.0 42.0 25.0 1.0 788.0 1.0 1.0 1.0 0 0 t 0 0 0 0 1.0 150.0 1.0 1.0 45.0 1.0 1.0 1.0 0 0
MA0807.1_rc_shift4 (TBX5_rc)				; oligos_7nt_mkv5_m1 versus MA0807.1_rc (TBX5_rc); m=21/34; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.510876; ----TmACACCT-- ; cor=; Ncor= a 0 0 0 0 283.0 915.0 1804.0 0.0 1804.0 28.0 133.0 207.0 0 0 c 0 0 0 0 343.0 1804.0 201.0 1804.0 166.0 1804.0 1804.0 409.0 0 0 g 0 0 0 0 76.0 616.0 225.0 0.0 131.0 0.0 190.0 89.0 0 0 t 0 0 0 0 1804.0 126.0 162.0 27.0 45.0 0.0 235.0 1804.0 0 0
MA0801.1_rc_shift4 (MGA_rc)				; oligos_7nt_mkv5_m1 versus MA0801.1_rc (MGA_rc); m=22/34; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.504099; ----TCACACCT-- ; cor=; Ncor= a 0 0 0 0 274.0 6465.0 30489.0 11.0 30489.0 104.0 1929.0 4160.0 0 0 c 0 0 0 0 920.0 30489.0 381.0 30489.0 96.0 30489.0 30489.0 8873.0 0 0 g 0 0 0 0 110.0 1753.0 3089.0 1.0 3534.0 509.0 3737.0 1151.0 0 0 t 0 0 0 0 30489.0 689.0 1042.0 14.0 12.0 16.0 4310.0 30489.0 0 0
MA0803.1_rc_shift4 (TBX15_rc)				; oligos_7nt_mkv5_m1 versus MA0803.1_rc (TBX15_rc); m=23/34; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.498582; ----TCACACCT-- ; cor=; Ncor= a 0 0 0 0 96.0 937.0 10502.0 0.0 10502.0 0.0 103.0 112.0 0 0 c 0 0 0 0 306.0 10502.0 324.0 10502.0 245.0 10502.0 10502.0 664.0 0 0 g 0 0 0 0 71.0 454.0 435.0 8.0 175.0 7.0 101.0 74.0 0 0 t 0 0 0 0 10502.0 44.0 140.0 0.0 61.0 19.0 458.0 10502.0 0 0
MA0805.1_rc_shift4 (TBX1_rc)				; oligos_7nt_mkv5_m1 versus MA0805.1_rc (TBX1_rc); m=24/34; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.488792; ----TCACACCT-- ; cor=; Ncor= a 0 0 0 0 0.0 1039.0 11931.0 0.0 11931.0 0.0 669.0 564.0 0 0 c 0 0 0 0 18.0 11931.0 109.0 11931.0 141.0 11931.0 11931.0 1007.0 0 0 g 0 0 0 0 33.0 720.0 613.0 5.0 214.0 0.0 711.0 113.0 0 0 t 0 0 0 0 11931.0 141.0 142.0 0.0 28.0 0.0 1560.0 11931.0 0 0
MA0806.1_rc_shift4 (TBX4_rc)				; oligos_7nt_mkv5_m1 versus MA0806.1_rc (TBX4_rc); m=25/34; ncol2=8; w=0; offset=2; strand=R; shift=4; score=0.482421; ----TcACACCT-- ; cor=; Ncor= a 0 0 0 0 965.0 8384.0 18646.0 0.0 18646.0 33.0 1162.0 1283.0 0 0 c 0 0 0 0 1733.0 18646.0 304.0 18646.0 191.0 18646.0 18646.0 2353.0 0 0 g 0 0 0 0 588.0 5396.0 2859.0 0.0 1644.0 189.0 2328.0 437.0 0 0 t 0 0 0 0 18646.0 1355.0 1551.0 0.0 0.0 38.0 3082.0 18646.0 0 0
MA0002.3_rc_shift1 (Runx1_rc)				; oligos_7nt_mkv5_m1 versus MA0002.3_rc (Runx1_rc); m=26/34; ncol2=9; w=-1; offset=-1; strand=R; shift=1; score=0.47638; -waaCCACAr---- ; cor=; Ncor= a 0 1053.0 1325.0 1339.0 93.0 13.0 1716.0 53.0 1936.0 656.0 0 0 0 0 c 0 289.0 81.0 251.0 1848.0 1987.0 70.0 1872.0 7.0 149.0 0 0 0 0 g 0 158.0 463.0 400.0 42.0 0.0 127.0 75.0 0.0 1072.0 0 0 0 0 t 0 500.0 131.0 10.0 17.0 0.0 87.0 0.0 57.0 123.0 0 0 0 0
MA1620.2_shift6 (Ptf1A)				; oligos_7nt_mkv5_m1 versus MA1620.2 (Ptf1A); m=27/34; ncol2=8; w=0; offset=4; strand=D; shift=6; score=0.473434; ------aCACCTGt ; cor=; Ncor= a 0 0 0 0 0 0 6867.0 184.0 10033.0 116.0 256.0 85.0 68.0 527.0 c 0 0 0 0 0 0 1188.0 9887.0 60.0 8567.0 9612.0 94.0 109.0 1615.0 g 0 0 0 0 0 0 1410.0 113.0 84.0 1182.0 294.0 98.0 9972.0 1516.0 t 0 0 0 0 0 0 826.0 107.0 114.0 426.0 129.0 10014.0 142.0 6633.0
MA0130.1_shift2 (ZNF354C)				; oligos_7nt_mkv5_m1 versus MA0130.1 (ZNF354C); m=28/34; ncol2=6; w=0; offset=0; strand=D; shift=2; score=0.456875; --mTCCAC------ ; cor=; Ncor= a 0 0 7.0 3.0 0.0 0.0 16.0 0.0 0 0 0 0 0 0 c 0 0 6.0 2.0 16.0 16.0 0.0 15.0 0 0 0 0 0 0 g 0 0 3.0 0.0 0.0 0.0 0.0 1.0 0 0 0 0 0 0 t 0 0 0.0 11.0 0.0 0.0 0.0 0.0 0 0 0 0 0 0
MA1989.2_shift1 (Bcl11B)				; oligos_7nt_mkv5_m1 versus MA1989.2 (Bcl11B); m=29/34; ncol2=9; w=-1; offset=-1; strand=D; shift=1; score=0.450432; -aAACCACAa---- ; cor=; Ncor= a 0 24743.0 31408.0 36130.0 1391.0 1058.0 36734.0 1718.0 36053.0 23689.0 0 0 0 0 c 0 5084.0 2339.0 1397.0 36798.0 37476.0 940.0 35985.0 1397.0 3546.0 0 0 0 0 g 0 3712.0 3044.0 1662.0 762.0 416.0 796.0 1217.0 1246.0 7120.0 0 0 0 0 t 0 6252.0 3000.0 602.0 840.0 841.0 1321.0 871.0 1095.0 5436.0 0 0 0 0
MA0162.5_shift0 (EGR1)				; oligos_7nt_mkv5_m1 versus MA0162.5 (EGR1); m=30/34; ncol2=10; w=-2; offset=-2; strand=D; shift=0; score=0.432959; mCGCCCACgC---- ; cor=; Ncor= a 14508.0 642.0 5110.0 227.0 1440.0 314.0 22297.0 153.0 4696.0 969.0 0 0 0 0 c 10303.0 28403.0 1131.0 29338.0 27321.0 28958.0 5420.0 29507.0 2806.0 25196.0 0 0 0 0 g 3854.0 756.0 22237.0 665.0 1455.0 698.0 2122.0 699.0 20544.0 2157.0 0 0 0 0 t 1933.0 797.0 2120.0 368.0 382.0 628.0 759.0 239.0 2552.0 2276.0 0 0 0 0
MA1558.2_rc_shift7 (SNAI1_rc)				; oligos_7nt_mkv5_m1 versus MA1558.2_rc (SNAI1_rc); m=31/34; ncol2=7; w=0; offset=5; strand=R; shift=7; score=0.423679; -------CACCTGy ; cor=; Ncor= a 0 0 0 0 0 0 0 311.0 19982.0 28.0 306.0 568.0 340.0 3518.0 c 0 0 0 0 0 0 0 19982.0 42.0 19982.0 19982.0 91.0 275.0 12989.0 g 0 0 0 0 0 0 0 0.0 0.0 5.0 517.0 297.0 19982.0 501.0 t 0 0 0 0 0 0 0 706.0 38.0 72.0 1766.0 19982.0 446.0 6993.0
MA1648.2_shift7 (TCF12)				; oligos_7nt_mkv5_m1 versus MA1648.2 (TCF12); m=32/34; ncol2=7; w=0; offset=5; strand=D; shift=7; score=0.415883; -------CACCTGC ; cor=; Ncor= a 0 0 0 0 0 0 0 955.0 52529.0 744.0 1913.0 1380.0 2819.0 1089.0 c 0 0 0 0 0 0 0 57848.0 2007.0 55598.0 55765.0 3886.0 2088.0 55061.0 g 0 0 0 0 0 0 0 1186.0 5607.0 3780.0 3536.0 2625.0 55922.0 2314.0 t 0 0 0 0 0 0 0 1887.0 1733.0 1754.0 662.0 53985.0 1047.0 3412.0
MA0522.4_shift7 (TCF3)				; oligos_7nt_mkv5_m1 versus MA0522.4 (TCF3); m=33/34; ncol2=7; w=0; offset=5; strand=D; shift=7; score=0.413662; -------CACCTGC ; cor=; Ncor= a 0 0 0 0 0 0 0 469.0 28916.0 309.0 1127.0 380.0 1089.0 295.0 c 0 0 0 0 0 0 0 29379.0 396.0 28640.0 27199.0 2003.0 1038.0 28742.0 g 0 0 0 0 0 0 0 708.0 1574.0 1362.0 2652.0 1339.0 28642.0 987.0 t 0 0 0 0 0 0 0 705.0 375.0 950.0 283.0 27539.0 492.0 1237.0
MA0479.2_shift1 (FOXH1)				; oligos_7nt_mkv5_m1 versus MA0479.2 (FOXH1); m=34/34; ncol2=8; w=-1; offset=-1; strand=D; shift=1; score=0.407834; -AATMCACA----- ; cor=; Ncor= a 0 8211.0 7547.0 0.0 2374.0 1414.0 8211.0 0.0 7138.0 0 0 0 0 0 c 0 0.0 0.0 0.0 5773.0 6797.0 0.0 8211.0 0.0 0 0 0 0 0 g 0 0.0 229.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0 0 0 0 t 0 0.0 435.0 8211.0 64.0 0.0 0.0 0.0 1073.0 0 0 0 0 0