/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.125527_2026-01-05.125527_ogDb5d/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab 
 compare-matrices  -v 1 -format transfac -file $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.125527_2026-01-05.125527_ogDb5d/results/discovered_motifs/peak-motifs_motifs_discovered.tf -distinct -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.125527_2026-01-05.125527_ogDb5d/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab
 Program version       	1.118
 Quick mode 
 Input files
	file2 	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.125527_2026-01-05.125527_ogDb5d/results/discovered_motifs/peak-motifs_motifs_discovered.tf
	file1 	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.125527_2026-01-05.125527_ogDb5d/results/discovered_motifs/peak-motifs_motifs_discovered.tf
 Output files
	prefix       	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.125527_2026-01-05.125527_ogDb5d/results/discovered_motifs/peak-motifs_motifs_disco_compa
	match_table_txt	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.125527_2026-01-05.125527_ogDb5d/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab
	alignments_1ton	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.125527_2026-01-05.125527_ogDb5d/results/discovered_motifs/peak-motifs_motifs_disco_compa_alignments_1ton.tab
	html_index   	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.125527_2026-01-05.125527_ogDb5d/results/discovered_motifs/peak-motifs_motifs_disco_compa_index.html
	alignments_1ton_html	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.125527_2026-01-05.125527_ogDb5d/results/discovered_motifs/peak-motifs_motifs_disco_compa_alignments_1ton.html
	match_table_html	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.125527_2026-01-05.125527_ogDb5d/results/discovered_motifs/peak-motifs_motifs_disco_compa.html
 Matrices
	file1	20 matrices	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.125527_2026-01-05.125527_ogDb5d/results/discovered_motifs/peak-motifs_motifs_discovered.tf
		file1	1	10	36465
		file1	2	10	26616
		file1	3	10	36854
		file1	4	16	8830
		file1	5	11	28585
		file1	6	24	7197
		file1	7	24	1051
		file1	8	14	12198
		file1	9	24	1798
		file1	10	24	1191
		file1	11	11	51084
		...	10 more matrices
	file2	20 matrices	$RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.125527_2026-01-05.125527_ogDb5d/results/discovered_motifs/peak-motifs_motifs_discovered.tf
		file2		1		10		36465
		file2		2		10		26616
		file2		3		10		36854
		file2		4		16		8830
		file2		5		11		28585
		file2		6		24		7197
		file2		7		24		1051
		file2		8		14		12198
		file2		9		24		1798
		file2		10		24		1191
		file2		11		11		51084
		...	10 more matrices
 Column content
	1	id1          	Identifier of the first matrix
	2	id2          	Identifier of the second matrix
	3	name1        	Name of the first matrix
	4	name2        	Name of the second matrix
	5	cor          	Pearson coefficient of correlation between frequency matrices
	6	Ncor         	Normalized correlation. Ncor = cor * Wr
	7	w1           	Width of the first matrix
	8	w2           	Width of the second matrix
	9	w            	Alignment length (number of overlapping columns between matrix 1 and matrix 2, as a function of the offset)
	10	W            	Total alignment length (overlapping + non-overlapping columns). W = w1 + w2 - w
	11	Wr           	Relative alignment length (overlap divided by the total alignemnt length). Wr = w/W
	12	wr1          	Alignment length relative to the width of the first matrix. wr1 = w/w1
	13	wr2          	Alignment length relative to the width of the second matrix. wr2 = w/w2
	14	strand       	"strand", i.e. orientation of matrix 2 relative to matrix 1 (D=direct;  R=reverse)
	15	offset       	shift of the second matrix relative to the first matrix (negative:left; positive: right)
id1 id2 name1 name2 cor Ncor w1 w2 w W Wr wr1 wr2 strand offset
positions_6nt_m4 positions_6nt_m4 positions_6nt_m4 positions_6nt_m4 1.000 1.000 24 24 24 24 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv4_m3 oligos_6nt_mkv4_m3 oligos_6nt_mkv4_m3 oligos_6nt_mkv4_m3 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 D 0
oligos_7nt_mkv5_m5 oligos_7nt_mkv5_m5 oligos_7nt_mkv5_m5 oligos_7nt_mkv5_m5 1.000 1.000 11 11 11 11 1.0000 1.0000 1.0000 D 0
positions_7nt_m5 positions_7nt_m5 positions_7nt_m5 positions_7nt_m5 1.000 1.000 22 22 22 22 1.0000 1.0000 1.0000 D 0
positions_7nt_m1 positions_7nt_m1 positions_7nt_m1 positions_7nt_m1 1.000 1.000 24 24 24 24 1.0000 1.0000 1.0000 D 0
positions_6nt_m5 positions_6nt_m5 positions_6nt_m5 positions_6nt_m5 1.000 1.000 24 24 24 24 1.0000 1.0000 1.0000 D 0
positions_6nt_m1 positions_6nt_m1 positions_6nt_m1 positions_6nt_m1 1.000 1.000 24 24 24 24 1.0000 1.0000 1.0000 D 0
oligos_7nt_mkv5_m3 oligos_7nt_mkv5_m3 oligos_7nt_mkv5_m3 oligos_7nt_mkv5_m3 1.000 1.000 12 12 12 12 1.0000 1.0000 1.0000 D 0
positions_7nt_m2 positions_7nt_m2 positions_7nt_m2 positions_7nt_m2 1.000 1.000 17 17 17 17 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv4_m4 oligos_6nt_mkv4_m4 oligos_6nt_mkv4_m4 oligos_6nt_mkv4_m4 1.000 1.000 16 16 16 16 1.0000 1.0000 1.0000 D 0
oligos_7nt_mkv5_m1 oligos_7nt_mkv5_m1 oligos_7nt_mkv5_m1 oligos_7nt_mkv5_m1 1.000 1.000 11 11 11 11 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv4_m2 oligos_6nt_mkv4_m2 oligos_6nt_mkv4_m2 oligos_6nt_mkv4_m2 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 D 0
positions_6nt_m3 positions_6nt_m3 positions_6nt_m3 positions_6nt_m3 1.000 1.000 14 14 14 14 1.0000 1.0000 1.0000 D 0
positions_7nt_m4 positions_7nt_m4 positions_7nt_m4 positions_7nt_m4 1.000 1.000 24 24 24 24 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv4_m5 oligos_6nt_mkv4_m5 oligos_6nt_mkv4_m5 oligos_6nt_mkv4_m5 1.000 1.000 11 11 11 11 1.0000 1.0000 1.0000 D 0
oligos_7nt_mkv5_m4 oligos_7nt_mkv5_m4 oligos_7nt_mkv5_m4 oligos_7nt_mkv5_m4 1.000 1.000 12 12 12 12 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv4_m1 oligos_6nt_mkv4_m1 oligos_6nt_mkv4_m1 oligos_6nt_mkv4_m1 1.000 1.000 10 10 10 10 1.0000 1.0000 1.0000 D 0
positions_6nt_m2 positions_6nt_m2 positions_6nt_m2 positions_6nt_m2 1.000 1.000 24 24 24 24 1.0000 1.0000 1.0000 D 0
oligos_7nt_mkv5_m2 oligos_7nt_mkv5_m2 oligos_7nt_mkv5_m2 oligos_7nt_mkv5_m2 1.000 1.000 12 12 12 12 1.0000 1.0000 1.0000 D 0
positions_7nt_m3 positions_7nt_m3 positions_7nt_m3 positions_7nt_m3 1.000 1.000 22 22 22 22 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv4_m1 oligos_6nt_mkv4_m2 oligos_6nt_mkv4_m1 oligos_6nt_mkv4_m2 0.923 0.923 10 10 10 10 1.0000 1.0000 1.0000 R 0
oligos_6nt_mkv4_m2 oligos_6nt_mkv4_m1 oligos_6nt_mkv4_m2 oligos_6nt_mkv4_m1 0.923 0.923 10 10 10 10 1.0000 1.0000 1.0000 R 0
oligos_7nt_mkv5_m3 oligos_7nt_mkv5_m2 oligos_7nt_mkv5_m3 oligos_7nt_mkv5_m2 0.898 0.898 12 12 12 12 1.0000 1.0000 1.0000 D 0
oligos_7nt_mkv5_m2 oligos_7nt_mkv5_m3 oligos_7nt_mkv5_m2 oligos_7nt_mkv5_m3 0.898 0.898 12 12 12 12 1.0000 1.0000 1.0000 D 0
oligos_6nt_mkv4_m3 oligos_6nt_mkv4_m1 oligos_6nt_mkv4_m3 oligos_6nt_mkv4_m1 0.835 0.835 10 10 10 10 1.0000 1.0000 1.0000 R 0
oligos_6nt_mkv4_m1 oligos_6nt_mkv4_m3 oligos_6nt_mkv4_m1 oligos_6nt_mkv4_m3 0.835 0.835 10 10 10 10 1.0000 1.0000 1.0000 D 0
oligos_7nt_mkv5_m4 oligos_7nt_mkv5_m2 oligos_7nt_mkv5_m4 oligos_7nt_mkv5_m2 0.770 0.770 12 12 12 12 1.0000 1.0000 1.0000 R 0
oligos_7nt_mkv5_m2 oligos_7nt_mkv5_m4 oligos_7nt_mkv5_m2 oligos_7nt_mkv5_m4 0.770 0.770 12 12 12 12 1.0000 1.0000 1.0000 R 0
positions_6nt_m1 positions_6nt_m4 positions_6nt_m1 positions_6nt_m4 0.731 0.731 24 24 24 24 1.0000 1.0000 1.0000 R 0
positions_6nt_m4 positions_6nt_m1 positions_6nt_m4 positions_6nt_m1 0.731 0.731 24 24 24 24 1.0000 1.0000 1.0000 R 0
oligos_7nt_mkv5_m4 oligos_6nt_mkv4_m3 oligos_7nt_mkv5_m4 oligos_6nt_mkv4_m3 0.845 0.705 12 10 10 12 0.8333 0.8333 1.0000 D 0
oligos_6nt_mkv4_m3 oligos_7nt_mkv5_m4 oligos_6nt_mkv4_m3 oligos_7nt_mkv5_m4 0.845 0.705 10 12 10 12 0.8333 1.0000 0.8333 D 0
oligos_6nt_mkv4_m1 oligos_7nt_mkv5_m3 oligos_6nt_mkv4_m1 oligos_7nt_mkv5_m3 0.825 0.688 10 12 10 12 0.8333 1.0000 0.8333 D 0
oligos_7nt_mkv5_m3 oligos_6nt_mkv4_m1 oligos_7nt_mkv5_m3 oligos_6nt_mkv4_m1 0.825 0.688 12 10 10 12 0.8333 0.8333 1.0000 D 0
positions_7nt_m4 positions_7nt_m1 positions_7nt_m4 positions_7nt_m1 0.796 0.674 24 24 22 26 0.8462 0.9167 0.9167 R 2
positions_7nt_m1 positions_7nt_m4 positions_7nt_m1 positions_7nt_m4 0.796 0.674 24 24 22 26 0.8462 0.9167 0.9167 R 2
oligos_6nt_mkv4_m2 oligos_6nt_mkv4_m5 oligos_6nt_mkv4_m2 oligos_6nt_mkv4_m5 0.734 0.667 10 11 10 11 0.9091 1.0000 0.9091 D -1
oligos_6nt_mkv4_m5 oligos_6nt_mkv4_m2 oligos_6nt_mkv4_m5 oligos_6nt_mkv4_m2 0.734 0.667 11 10 10 11 0.9091 0.9091 1.0000 D 1
oligos_7nt_mkv5_m5 oligos_6nt_mkv4_m1 oligos_7nt_mkv5_m5 oligos_6nt_mkv4_m1 0.731 0.664 11 10 10 11 0.9091 0.9091 1.0000 D 1
oligos_6nt_mkv4_m1 oligos_7nt_mkv5_m5 oligos_6nt_mkv4_m1 oligos_7nt_mkv5_m5 0.731 0.664 10 11 10 11 0.9091 1.0000 0.9091 D -1
oligos_7nt_mkv5_m2 oligos_6nt_mkv4_m1 oligos_7nt_mkv5_m2 oligos_6nt_mkv4_m1 0.781 0.651 12 10 10 12 0.8333 0.8333 1.0000 D 0
oligos_6nt_mkv4_m1 oligos_7nt_mkv5_m2 oligos_6nt_mkv4_m1 oligos_7nt_mkv5_m2 0.781 0.651 10 12 10 12 0.8333 1.0000 0.8333 D 0
oligos_7nt_mkv5_m5 oligos_6nt_mkv4_m3 oligos_7nt_mkv5_m5 oligos_6nt_mkv4_m3 0.712 0.647 11 10 10 11 0.9091 0.9091 1.0000 D 0
oligos_6nt_mkv4_m3 oligos_7nt_mkv5_m5 oligos_6nt_mkv4_m3 oligos_7nt_mkv5_m5 0.712 0.647 10 11 10 11 0.9091 1.0000 0.9091 D 0
positions_7nt_m2 positions_7nt_m3 positions_7nt_m2 positions_7nt_m3 0.829 0.641 17 22 17 22 0.7727 1.0000 0.7727 D 0
positions_7nt_m3 positions_7nt_m2 positions_7nt_m3 positions_7nt_m2 0.829 0.641 22 17 17 22 0.7727 0.7727 1.0000 D 0
oligos_7nt_mkv5_m3 oligos_6nt_mkv4_m2 oligos_7nt_mkv5_m3 oligos_6nt_mkv4_m2 0.746 0.622 12 10 10 12 0.8333 0.8333 1.0000 R 0
oligos_6nt_mkv4_m2 oligos_7nt_mkv5_m3 oligos_6nt_mkv4_m2 oligos_7nt_mkv5_m3 0.746 0.622 10 12 10 12 0.8333 1.0000 0.8333 R -2
oligos_7nt_mkv5_m4 positions_7nt_m2 oligos_7nt_mkv5_m4 positions_7nt_m2 0.805 0.568 12 17 12 17 0.7059 1.0000 0.7059 R -1
positions_7nt_m2 oligos_7nt_mkv5_m4 positions_7nt_m2 oligos_7nt_mkv5_m4 0.805 0.568 17 12 12 17 0.7059 0.7059 1.0000 R 4
positions_6nt_m1 positions_7nt_m1 positions_6nt_m1 positions_7nt_m1 0.705 0.549 24 24 21 27 0.7778 0.8750 0.8750 D 3
positions_7nt_m1 positions_6nt_m1 positions_7nt_m1 positions_6nt_m1 0.705 0.549 24 24 21 27 0.7778 0.8750 0.8750 D -3
positions_7nt_m2 positions_6nt_m4 positions_7nt_m2 positions_6nt_m4 0.837 0.483 17 24 15 26 0.5769 0.8824 0.6250 R 2
positions_6nt_m4 positions_7nt_m2 positions_6nt_m4 positions_7nt_m2 0.837 0.483 24 17 15 26 0.5769 0.6250 0.8824 R 9
positions_6nt_m4 positions_7nt_m4 positions_6nt_m4 positions_7nt_m4 0.728 0.477 24 24 19 29 0.6552 0.7917 0.7917 R -5
positions_7nt_m4 positions_6nt_m4 positions_7nt_m4 positions_6nt_m4 0.728 0.477 24 24 19 29 0.6552 0.7917 0.7917 R -5
positions_6nt_m3 positions_7nt_m5 positions_6nt_m3 positions_7nt_m5 0.721 0.459 14 22 14 22 0.6364 1.0000 0.6364 D -5
positions_7nt_m5 positions_6nt_m3 positions_7nt_m5 positions_6nt_m3 0.721 0.459 22 14 14 22 0.6364 0.6364 1.0000 D 5
oligos_6nt_mkv4_m3 positions_7nt_m2 oligos_6nt_mkv4_m3 positions_7nt_m2 0.773 0.454 10 17 10 17 0.5882 1.0000 0.5882 D -6
positions_7nt_m2 oligos_6nt_mkv4_m3 positions_7nt_m2 oligos_6nt_mkv4_m3 0.773 0.454 17 10 10 17 0.5882 0.5882 1.0000 D 6
oligos_7nt_mkv5_m2 positions_7nt_m1 oligos_7nt_mkv5_m2 positions_7nt_m1 0.855 0.427 12 24 12 24 0.5000 1.0000 0.5000 D -5
positions_7nt_m1 oligos_7nt_mkv5_m2 positions_7nt_m1 oligos_7nt_mkv5_m2 0.855 0.427 24 12 12 24 0.5000 0.5000 1.0000 D 5
oligos_7nt_mkv5_m4 positions_7nt_m4 oligos_7nt_mkv5_m4 positions_7nt_m4 0.839 0.420 12 24 12 24 0.5000 1.0000 0.5000 D -9
positions_7nt_m4 oligos_7nt_mkv5_m4 positions_7nt_m4 oligos_7nt_mkv5_m4 0.839 0.420 24 12 12 24 0.5000 0.5000 1.0000 D 9
positions_6nt_m5 positions_6nt_m2 positions_6nt_m5 positions_6nt_m2 0.822 0.411 24 24 16 32 0.5000 0.6667 0.6667 D -8
positions_6nt_m2 positions_6nt_m5 positions_6nt_m2 positions_6nt_m5 0.822 0.411 24 24 16 32 0.5000 0.6667 0.6667 D 8 
 Host name	rsat
 Job started	2026-01-05.131022
 Job done	2026-01-05.131120
 Seconds	10.03
	user	10.03
	system	2.37
	cuser	41.97
;	csystem	3.67