AC  assembly_1
XX
ID  aaaaaaa
XX
DE  nnAAAAAAAnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         8.84      0.00      0.00      0.00
4         8.84      0.00      0.00      0.00
5         8.84      0.00      0.00      0.00
6         8.84      0.00      0.00      0.00
7         8.84      0.00      0.00      0.00
8         8.84      0.00      0.00      0.00
9         8.84      0.00      0.00      0.00
10        0.00      0.00      0.00      0.00
11        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 1
CC  id: assembly_1
CC  name: aaaaaaa
CC  asmb.seed: aaaaaaa
CC  matrix.nb: 1
CC  sites: 1
CC  consensus.strict: --AAAAAAA--
CC  consensus.strict.rc: --TTTTTTT--
CC  consensus.IUPAC: nnAAAAAAAnn
CC  consensus.IUPAC.rc: NNTTTTTTTNN
CC  consensus.regexp: [acgt][acgt]AAAAAAA[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]TTTTTTT[ACGT][ACGT]
XX
//
AC  assembly_2
XX
ID  tttttaaaaa
XX
DE  nntTTTTAAAAann
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         0.00      0.00      0.00      0.94
4         0.00      0.00      0.00      3.64
5         0.00      0.00      0.00      3.64
6         0.00      0.00      0.00      3.64
7         0.00      0.00      0.00      3.64
8         3.64      0.00      0.00      0.00
9         3.64      0.00      0.00      0.00
10        3.64      0.00      0.00      0.00
11        3.64      0.00      0.00      0.00
12        0.94      0.00      0.00      0.00
13        0.00      0.00      0.00      0.00
14        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 2
CC  id: assembly_2
CC  name: tttttaaaaa
CC  asmb.seed: tttaaaa
CC  matrix.nb: 2
CC  sites: 4
CC  consensus.strict: --tTTTTAAAAa--
CC  consensus.strict.rc: --TTTTTAAAAA--
CC  consensus.IUPAC: nntTTTTAAAAann
CC  consensus.IUPAC.rc: NNTTTTTAAAAANN
CC  consensus.regexp: [acgt][acgt]tTTTTAAAAa[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]TTTTTAAAAA[ACGT][ACGT]
XX
//
AC  assembly_3
XX
ID  gaacaatgg
XX
DE  nnGAACAATGGnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         0.00      0.00      2.77      0.00
4         3.22      0.00      0.00      0.00
5         3.22      0.00      0.00      0.00
6         0.00      3.22      0.00      0.00
7         3.22      0.00      0.00      0.00
8         3.22      0.00      0.00      0.00
9         0.00      0.00      0.00      3.22
10        0.00      0.00      3.22      0.00
11        0.00      0.00      2.64      0.00
12        0.00      0.00      0.00      0.00
13        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 3
CC  id: assembly_3
CC  name: gaacaatgg
CC  asmb.seed: aacaatg
CC  matrix.nb: 3
CC  sites: 3
CC  consensus.strict: --GAACAATGG--
CC  consensus.strict.rc: --CCATTGTTC--
CC  consensus.IUPAC: nnGAACAATGGnn
CC  consensus.IUPAC.rc: NNCCATTGTTCNN
CC  consensus.regexp: [acgt][acgt]GAACAATGG[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]CCATTGTTC[ACGT][ACGT]
XX
//
AC  assembly_4
XX
ID  atttaaaaa
XX
DE  nnATTTAAAAann
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         2.50      0.00      0.00      0.00
4         0.00      0.00      0.00      3.64
5         0.00      0.00      0.00      3.64
6         0.00      0.00      0.00      3.64
7         3.64      0.00      0.00      0.00
8         3.64      0.00      0.00      0.00
9         3.64      0.00      0.00      0.00
10        3.64      0.00      0.00      0.00
11        0.94      0.00      0.00      0.00
12        0.00      0.00      0.00      0.00
13        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 4
CC  id: assembly_4
CC  name: atttaaaaa
CC  asmb.seed: atttaaa
CC  matrix.nb: 4
CC  sites: 3
CC  consensus.strict: --ATTTAAAAa--
CC  consensus.strict.rc: --TTTTTAAAT--
CC  consensus.IUPAC: nnATTTAAAAann
CC  consensus.IUPAC.rc: NNTTTTTAAATNN
CC  consensus.regexp: [acgt][acgt]ATTTAAAAa[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]TTTTTAAAT[ACGT][ACGT]
XX
//
AC  assembly_5
XX
ID  acaatag
XX
DE  nnACAATAGnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         2.33      0.00      0.00      0.00
4         0.00      2.33      0.00      0.00
5         2.33      0.00      0.00      0.00
6         2.33      0.00      0.00      0.00
7         0.00      0.00      0.00      2.33
8         2.33      0.00      0.00      0.00
9         0.00      0.00      2.33      0.00
10        0.00      0.00      0.00      0.00
11        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 5
CC  id: assembly_5
CC  name: acaatag
CC  asmb.seed: acaatag
CC  matrix.nb: 5
CC  sites: 1
CC  consensus.strict: --ACAATAG--
CC  consensus.strict.rc: --CTATTGT--
CC  consensus.IUPAC: nnACAATAGnn
CC  consensus.IUPAC.rc: NNCTATTGTNN
CC  consensus.regexp: [acgt][acgt]ACAATAG[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]CTATTGT[ACGT][ACGT]
XX
//
