AC  assembly_1
XX
ID  taatga
XX
DE  nnTAATGAnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         0.00      0.00      0.00     37.97
4        37.97      0.00      0.00      0.00
5        37.97      0.00      0.00      0.00
6         0.00      0.00      0.00     37.97
7         0.00      0.00     37.97      0.00
8        37.97      0.00      0.00      0.00
9         0.00      0.00      0.00      0.00
10        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 1
CC  id: assembly_1
CC  name: taatga
CC  asmb.seed: taatga
CC  matrix.nb: 1
CC  sites: 1
CC  consensus.strict: --TAATGA--
CC  consensus.strict.rc: --TCATTA--
CC  consensus.IUPAC: nnTAATGAnn
CC  consensus.IUPAC.rc: NNTCATTANN
CC  consensus.regexp: [acgt][acgt]TAATGA[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]TCATTA[ACGT][ACGT]
XX
//
AC  assembly_2
XX
ID  acaatgg
XX
DE  nnACAATGGnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3        35.54      0.00      0.00      0.00
4         0.00     35.54      0.00      0.00
5        35.54      0.00      0.00      0.00
6        35.54      0.00      0.00      0.00
7         0.00      0.00      0.00     35.54
8         0.00      0.00     35.54      0.00
9         0.00      0.00      4.83      0.00
10        0.00      0.00      0.00      0.00
11        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 2
CC  id: assembly_2
CC  name: acaatgg
CC  asmb.seed: acaatg
CC  matrix.nb: 2
CC  sites: 2
CC  consensus.strict: --ACAATGG--
CC  consensus.strict.rc: --CCATTGT--
CC  consensus.IUPAC: nnACAATGGnn
CC  consensus.IUPAC.rc: NNCCATTGTNN
CC  consensus.regexp: [acgt][acgt]ACAATGG[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]CCATTGT[ACGT][ACGT]
XX
//
AC  assembly_3
XX
ID  ccaatc
XX
DE  nnCCAATCnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         0.00     33.02      0.00      0.00
4         0.00     33.02      0.00      0.00
5        33.02      0.00      0.00      0.00
6        33.02      0.00      0.00      0.00
7         0.00      0.00      0.00     33.02
8         0.00     33.02      0.00      0.00
9         0.00      0.00      0.00      0.00
10        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 3
CC  id: assembly_3
CC  name: ccaatc
CC  asmb.seed: ccaatc
CC  matrix.nb: 3
CC  sites: 1
CC  consensus.strict: --CCAATC--
CC  consensus.strict.rc: --GATTGG--
CC  consensus.IUPAC: nnCCAATCnn
CC  consensus.IUPAC.rc: NNGATTGGNN
CC  consensus.regexp: [acgt][acgt]CCAATC[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]GATTGG[ACGT][ACGT]
XX
//
AC  assembly_4
XX
ID  cccctccc
XX
DE  nnCCCCTCCCnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         0.00     22.63      0.00      0.00
4         0.00     22.63      0.00      0.00
5         0.00     22.63      0.00      0.00
6         0.00     22.63      0.00      0.00
7         0.00      0.00      0.00     22.63
8         0.00     22.63      0.00      0.00
9         0.00      8.51      0.00      0.00
10        0.00      8.51      0.00      0.00
11        0.00      0.00      0.00      0.00
12        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 4
CC  id: assembly_4
CC  name: cccctccc
CC  asmb.seed: cccctc
CC  matrix.nb: 4
CC  sites: 3
CC  consensus.strict: --CCCCTCCC--
CC  consensus.strict.rc: --GGGAGGGG--
CC  consensus.IUPAC: nnCCCCTCCCnn
CC  consensus.IUPAC.rc: NNGGGAGGGGNN
CC  consensus.regexp: [acgt][acgt]CCCCTCCC[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]GGGAGGGG[ACGT][ACGT]
XX
//
AC  assembly_5
XX
ID  caaaaga
XX
DE  nnCAAAAGAnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         0.00     21.14      0.00      0.00
4        21.14      0.00      0.00      0.00
5        21.14      0.00      0.00      0.00
6        21.14      0.00      0.00      0.00
7        21.14      0.00      0.00      0.00
8         0.00      0.00     21.14      0.00
9         4.06      0.00      0.00      0.00
10        0.00      0.00      0.00      0.00
11        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 5
CC  id: assembly_5
CC  name: caaaaga
CC  asmb.seed: caaaag
CC  matrix.nb: 5
CC  sites: 2
CC  consensus.strict: --CAAAAGA--
CC  consensus.strict.rc: --TCTTTTG--
CC  consensus.IUPAC: nnCAAAAGAnn
CC  consensus.IUPAC.rc: NNTCTTTTGNN
CC  consensus.regexp: [acgt][acgt]CAAAAGA[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]TCTTTTG[ACGT][ACGT]
XX
//
