One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.145905_2026-01-05.145905_RyN7XF/results/discovered_motifs/oligos_6nt_test_vs_ctrl_m3/peak-motifs_oligos_6nt_test_vs_ctrl_m3.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.145905_2026-01-05.145905_RyN7XF/results/discovered_motifs/oligos_6nt_test_vs_ctrl_m3/peak-motifs_oligos_6nt_test_vs_ctrl_m3_vs_db_JASPAR2024_CORE_vertebrates_non-redundant

One-to-n matrix alignment; reference matrix: oligos_6nt_test_vs_ctrl_m3_shift2 ; 18 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_test_vs_ctrl_m3_shift2 (oligos_6nt_test_vs_ctrl_m3)
; oligos_6nt_test_vs_ctrl_m3; m=0 (reference); ncol1=10; shift=2; ncol=12; --wtACTTATww ; Alignment reference a 0 0 1261 827 3641 86 313 69 3791 37 1190 959 c 0 0 707 928 27 3590 36 21 8 134 674 756 g 0 0 639 754 89 20 487 9 5 11 822 653 t 0 0 1202 1300 52 113 2973 3710 5 3627 1123 1441

MA0124.3_shift2 (Nkx3-1)
; oligos_6nt_test_vs_ctrl_m3 versus MA0124.3 (Nkx3-1); m=1/17; ncol2=7; w=0; offset=0; strand=D; shift=2; score=0.601632; --cCACTTA--- ; cor=; Ncor= a 0 0 981.0 0.0 5335.0 59.0 0.0 0.0 5335.0 0 0 0 c 0 0 5335.0 5335.0 28.0 5335.0 1.0 254.0 273.0 0 0 0 g 0 0 1776.0 10.0 10.0 9.0 0.0 0.0 173.0 0 0 0 t 0 0 275.0 336.0 88.0 9.0 5335.0 5335.0 523.0 0 0 0

MA0036.4_shift5 (GATA2)
; oligos_6nt_test_vs_ctrl_m3 versus MA0036.4 (GATA2); m=2/17; ncol2=7; w=0; offset=3; strand=D; shift=5; score=0.595669; -----CTTATCT ; cor=; Ncor= a 0 0 0 0 0 940.0 444.0 417.0 14098.0 145.0 96.0 2373.0 c 0 0 0 0 0 10607.0 259.0 34.0 14.0 77.0 13786.0 492.0 g 0 0 0 0 0 1223.0 150.0 21.0 43.0 48.0 126.0 367.0 t 0 0 0 0 0 1443.0 13360.0 13741.0 58.0 13943.0 205.0 10981.0

MA0482.3_shift4 (GATA4)
; oligos_6nt_test_vs_ctrl_m3 versus MA0482.3 (GATA4); m=3/17; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.56832; ----cCTTATCT ; cor=; Ncor= a 0 0 0 0 3977.0 3150.0 1586.0 1650.0 54420.0 770.0 480.0 7659.0 c 0 0 0 0 38289.0 50062.0 1429.0 1377.0 1703.0 582.0 56544.0 1792.0 g 0 0 0 0 5099.0 1103.0 749.0 808.0 1245.0 539.0 568.0 1376.0 t 0 0 0 0 11649.0 4699.0 55250.0 55179.0 1646.0 57123.0 1422.0 48187.0

MA1104.3_shift4 (GATA6)
; oligos_6nt_test_vs_ctrl_m3 versus MA1104.3 (GATA6); m=4/17; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.567726; ----TCTTATCT ; cor=; Ncor= a 0 0 0 0 5912.0 4535.0 2560.0 5044.0 76686.0 1507.0 1096.0 13149.0 c 0 0 0 0 11831.0 62936.0 1439.0 1393.0 815.0 852.0 75930.0 3228.0 g 0 0 0 0 7066.0 6459.0 580.0 615.0 819.0 456.0 712.0 1810.0 t 0 0 0 0 54635.0 5514.0 74865.0 72392.0 1124.0 76629.0 1706.0 61257.0

MA1970.2_shift4 (TRPS1)
; oligos_6nt_test_vs_ctrl_m3 versus MA1970.2 (TRPS1); m=5/17; ncol2=8; w=0; offset=2; strand=D; shift=4; score= 0.5672; ----TCTTATCT ; cor=; Ncor= a 0 0 0 0 1359.0 941.0 645.0 874.0 17440.0 312.0 252.0 2790.0 c 0 0 0 0 2547.0 14262.0 560.0 462.0 215.0 265.0 17146.0 792.0 g 0 0 0 0 1749.0 1426.0 320.0 449.0 329.0 179.0 263.0 716.0 t 0 0 0 0 12628.0 1654.0 16758.0 16498.0 299.0 17527.0 622.0 13985.0

MA0037.5_shift4 (Gata3)
; oligos_6nt_test_vs_ctrl_m3 versus MA0037.5 (Gata3); m=6/17; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.562307; ----tCTTATCT ; cor=; Ncor= a 0 0 0 0 2016.0 946.0 794.0 984.0 22974.0 427.0 294.0 3100.0 c 0 0 0 0 3859.0 19702.0 928.0 758.0 566.0 282.0 23839.0 903.0 g 0 0 0 0 2551.0 2165.0 280.0 960.0 528.0 291.0 255.0 608.0 t 0 0 0 0 16442.0 2055.0 22866.0 22166.0 800.0 23868.0 480.0 20257.0

MA0122.4_shift0 (Nkx3-2)
; oligos_6nt_test_vs_ctrl_m3 versus MA0122.4 (Nkx3-2); m=7/17; ncol2=10; w=-2; offset=-2; strand=D; shift=0; score=0.522916; aamCACTTAa-- ; cor=; Ncor= a 5714.0 5598.0 2604.0 79.0 9907.0 151.0 50.0 95.0 9680.0 5620.0 0 0 c 952.0 1109.0 5079.0 9900.0 82.0 9965.0 32.0 138.0 147.0 991.0 0 0 g 1466.0 1154.0 1504.0 23.0 19.0 10.0 29.0 68.0 68.0 1368.0 0 0 t 2088.0 2359.0 1033.0 218.0 212.0 94.0 10109.0 9919.0 325.0 2241.0 0 0

MA0914.2_shift3 (ISL2)
; oligos_6nt_test_vs_ctrl_m3 versus MA0914.2 (ISL2); m=8/17; ncol2=6; w=0; offset=1; strand=D; shift=3; score=0.520318; ---CAmTTA--- ; cor=; Ncor= a 0 0 0 160.0 5631.0 3161.0 218.0 278.0 5631.0 0 0 0 c 0 0 0 5631.0 162.0 5631.0 130.0 718.0 206.0 0 0 0 g 0 0 0 126.0 134.0 171.0 169.0 13.0 59.0 0 0 0 t 0 0 0 1019.0 248.0 398.0 5631.0 5631.0 1354.0 0 0 0

MA0035.5_shift5 (GATA1)
; oligos_6nt_test_vs_ctrl_m3 versus MA0035.5 (GATA1); m=9/17; ncol2=7; w=0; offset=3; strand=D; shift=5; score=0.50095; -----CTWATCT ; cor=; Ncor= a 0 0 0 0 0 3953.0 1314.0 49692.0 67550.0 2206.0 2567.0 7397.0 c 0 0 0 0 0 62419.0 595.0 710.0 1292.0 1238.0 65937.0 3025.0 g 0 0 0 0 0 2712.0 652.0 856.0 988.0 618.0 1471.0 765.0 t 0 0 0 0 0 2744.0 69267.0 20570.0 1998.0 67766.0 1853.0 60641.0

MA1963.2_rc_shift6 (SATB1_rc)
; oligos_6nt_test_vs_ctrl_m3 versus MA1963.2_rc (SATB1_rc); m=10/17; ncol2=7; w=0; offset=4; strand=R; shift=6; score=0.439601; ------TTATTA ; cor=; Ncor= a 0 0 0 0 0 0 1612.0 841.0 33685.0 1281.0 169.0 33500.0 c 0 0 0 0 0 0 1071.0 889.0 123.0 120.0 221.0 37.0 g 0 0 0 0 0 0 881.0 485.0 128.0 115.0 164.0 195.0 t 0 0 0 0 0 0 30660.0 32009.0 288.0 32708.0 33670.0 492.0

MA1577.2_shift3 (TLX2)
; oligos_6nt_test_vs_ctrl_m3 versus MA1577.2 (TLX2); m=11/17; ncol2=6; w=0; offset=1; strand=D; shift=3; score=0.430997; ---yAATTA--- ; cor=; Ncor= a 0 0 0 1435.0 7799.0 7799.0 0.0 0.0 7799.0 0 0 0 c 0 0 0 7799.0 0.0 0.0 0.0 0.0 0.0 0 0 0 g 0 0 0 1112.0 80.0 0.0 0.0 0.0 0.0 0 0 0 t 0 0 0 8156.0 0.0 0.0 7799.0 7799.0 0.0 0 0 0

MA0125.2_rc_shift3 (Nobox_rc)
; oligos_6nt_test_vs_ctrl_m3 versus MA0125.2_rc (Nobox_rc); m=12/17; ncol2=6; w=0; offset=1; strand=R; shift=3; score=0.430333; ---yAATTA--- ; cor=; Ncor= a 0 0 0 1.0 32.0 34.0 0.0 2.0 37.0 0 0 0 c 0 0 0 22.0 4.0 2.0 0.0 0.0 0.0 0 0 0 g 0 0 0 0.0 0.0 1.0 0.0 0.0 1.0 0 0 0 t 0 0 0 15.0 2.0 1.0 38.0 36.0 0.0 0 0 0

MA0699.2_shift3 (LBX2)
; oligos_6nt_test_vs_ctrl_m3 versus MA0699.2 (LBX2); m=13/17; ncol2=6; w=0; offset=1; strand=D; shift=3; score=0.429145; ---yAATTA--- ; cor=; Ncor= a 0 0 0 157.0 2996.0 2996.0 0.0 150.0 2996.0 0 0 0 c 0 0 0 1634.0 338.0 290.0 29.0 258.0 34.0 0 0 0 g 0 0 0 109.0 325.0 130.0 118.0 293.0 106.0 0 0 0 t 0 0 0 1362.0 57.0 89.0 2996.0 2996.0 148.0 0 0 0

MA0654.2_shift3 (ISX)
; oligos_6nt_test_vs_ctrl_m3 versus MA0654.2 (ISX); m=14/17; ncol2=6; w=0; offset=1; strand=D; shift=3; score=0.425665; ---yAATTA--- ; cor=; Ncor= a 0 0 0 10.0 2065.0 2065.0 0.0 0.0 2065.0 0 0 0 c 0 0 0 1003.0 48.0 16.0 0.0 0.0 0.0 0 0 0 g 0 0 0 0.0 5.0 0.0 0.0 24.0 0.0 0 0 0 t 0 0 0 1061.0 24.0 10.0 2065.0 2065.0 49.0 0 0 0

MA0718.2_shift3 (RAX)
; oligos_6nt_test_vs_ctrl_m3 versus MA0718.2 (RAX); m=15/17; ncol2=6; w=0; offset=1; strand=D; shift=3; score=0.425221; ---yAATTA--- ; cor=; Ncor= a 0 0 0 214.0 2412.0 2412.0 123.0 71.0 2412.0 0 0 0 c 0 0 0 1281.0 17.0 38.0 0.0 71.0 0.0 0 0 0 g 0 0 0 25.0 3.0 12.0 0.0 49.0 20.0 0 0 0 t 0 0 0 1131.0 40.0 24.0 2412.0 2412.0 126.0 0 0 0

MA0894.2_rc_shift3 (HESX1_rc)
; oligos_6nt_test_vs_ctrl_m3 versus MA0894.2_rc (HESX1_rc); m=16/17; ncol2=6; w=0; offset=1; strand=R; shift=3; score=0.423552; ---yAATTA--- ; cor=; Ncor= a 0 0 0 97.0 4072.0 4072.0 0.0 31.0 4072.0 0 0 0 c 0 0 0 2180.0 0.0 15.0 9.0 53.0 34.0 0 0 0 g 0 0 0 38.0 15.0 0.0 7.0 0.0 0.0 0 0 0 t 0 0 0 1892.0 0.0 0.0 4072.0 4072.0 187.0 0 0 0

MA0890.2_shift3 (GBX2)
; oligos_6nt_test_vs_ctrl_m3 versus MA0890.2 (GBX2); m=17/17; ncol2=6; w=0; offset=1; strand=D; shift=3; score=0.420628; ---yAATTA--- ; cor=; Ncor= a 0 0 0 699.0 27366.0 27366.0 0.0 318.0 27366.0 0 0 0 c 0 0 0 15511.0 570.0 250.0 61.0 570.0 73.0 0 0 0 g 0 0 0 106.0 1113.0 114.0 65.0 673.0 30.0 0 0 0 t 0 0 0 11855.0 227.0 25.0 27366.0 27366.0 650.0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_test_vs_ctrl_m3_shift2 (oligos_6nt_test_vs_ctrl_m3)				; oligos_6nt_test_vs_ctrl_m3; m=0 (reference); ncol1=10; shift=2; ncol=12; --wtACTTATww ; Alignment reference a 0 0 1261 827 3641 86 313 69 3791 37 1190 959 c 0 0 707 928 27 3590 36 21 8 134 674 756 g 0 0 639 754 89 20 487 9 5 11 822 653 t 0 0 1202 1300 52 113 2973 3710 5 3627 1123 1441
MA0124.3_shift2 (Nkx3-1)				; oligos_6nt_test_vs_ctrl_m3 versus MA0124.3 (Nkx3-1); m=1/17; ncol2=7; w=0; offset=0; strand=D; shift=2; score=0.601632; --cCACTTA--- ; cor=; Ncor= a 0 0 981.0 0.0 5335.0 59.0 0.0 0.0 5335.0 0 0 0 c 0 0 5335.0 5335.0 28.0 5335.0 1.0 254.0 273.0 0 0 0 g 0 0 1776.0 10.0 10.0 9.0 0.0 0.0 173.0 0 0 0 t 0 0 275.0 336.0 88.0 9.0 5335.0 5335.0 523.0 0 0 0
MA0036.4_shift5 (GATA2)				; oligos_6nt_test_vs_ctrl_m3 versus MA0036.4 (GATA2); m=2/17; ncol2=7; w=0; offset=3; strand=D; shift=5; score=0.595669; -----CTTATCT ; cor=; Ncor= a 0 0 0 0 0 940.0 444.0 417.0 14098.0 145.0 96.0 2373.0 c 0 0 0 0 0 10607.0 259.0 34.0 14.0 77.0 13786.0 492.0 g 0 0 0 0 0 1223.0 150.0 21.0 43.0 48.0 126.0 367.0 t 0 0 0 0 0 1443.0 13360.0 13741.0 58.0 13943.0 205.0 10981.0
MA0482.3_shift4 (GATA4)				; oligos_6nt_test_vs_ctrl_m3 versus MA0482.3 (GATA4); m=3/17; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.56832; ----cCTTATCT ; cor=; Ncor= a 0 0 0 0 3977.0 3150.0 1586.0 1650.0 54420.0 770.0 480.0 7659.0 c 0 0 0 0 38289.0 50062.0 1429.0 1377.0 1703.0 582.0 56544.0 1792.0 g 0 0 0 0 5099.0 1103.0 749.0 808.0 1245.0 539.0 568.0 1376.0 t 0 0 0 0 11649.0 4699.0 55250.0 55179.0 1646.0 57123.0 1422.0 48187.0
MA1104.3_shift4 (GATA6)				; oligos_6nt_test_vs_ctrl_m3 versus MA1104.3 (GATA6); m=4/17; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.567726; ----TCTTATCT ; cor=; Ncor= a 0 0 0 0 5912.0 4535.0 2560.0 5044.0 76686.0 1507.0 1096.0 13149.0 c 0 0 0 0 11831.0 62936.0 1439.0 1393.0 815.0 852.0 75930.0 3228.0 g 0 0 0 0 7066.0 6459.0 580.0 615.0 819.0 456.0 712.0 1810.0 t 0 0 0 0 54635.0 5514.0 74865.0 72392.0 1124.0 76629.0 1706.0 61257.0
MA1970.2_shift4 (TRPS1)				; oligos_6nt_test_vs_ctrl_m3 versus MA1970.2 (TRPS1); m=5/17; ncol2=8; w=0; offset=2; strand=D; shift=4; score= 0.5672; ----TCTTATCT ; cor=; Ncor= a 0 0 0 0 1359.0 941.0 645.0 874.0 17440.0 312.0 252.0 2790.0 c 0 0 0 0 2547.0 14262.0 560.0 462.0 215.0 265.0 17146.0 792.0 g 0 0 0 0 1749.0 1426.0 320.0 449.0 329.0 179.0 263.0 716.0 t 0 0 0 0 12628.0 1654.0 16758.0 16498.0 299.0 17527.0 622.0 13985.0
MA0037.5_shift4 (Gata3)				; oligos_6nt_test_vs_ctrl_m3 versus MA0037.5 (Gata3); m=6/17; ncol2=8; w=0; offset=2; strand=D; shift=4; score=0.562307; ----tCTTATCT ; cor=; Ncor= a 0 0 0 0 2016.0 946.0 794.0 984.0 22974.0 427.0 294.0 3100.0 c 0 0 0 0 3859.0 19702.0 928.0 758.0 566.0 282.0 23839.0 903.0 g 0 0 0 0 2551.0 2165.0 280.0 960.0 528.0 291.0 255.0 608.0 t 0 0 0 0 16442.0 2055.0 22866.0 22166.0 800.0 23868.0 480.0 20257.0
MA0122.4_shift0 (Nkx3-2)				; oligos_6nt_test_vs_ctrl_m3 versus MA0122.4 (Nkx3-2); m=7/17; ncol2=10; w=-2; offset=-2; strand=D; shift=0; score=0.522916; aamCACTTAa-- ; cor=; Ncor= a 5714.0 5598.0 2604.0 79.0 9907.0 151.0 50.0 95.0 9680.0 5620.0 0 0 c 952.0 1109.0 5079.0 9900.0 82.0 9965.0 32.0 138.0 147.0 991.0 0 0 g 1466.0 1154.0 1504.0 23.0 19.0 10.0 29.0 68.0 68.0 1368.0 0 0 t 2088.0 2359.0 1033.0 218.0 212.0 94.0 10109.0 9919.0 325.0 2241.0 0 0
MA0914.2_shift3 (ISL2)				; oligos_6nt_test_vs_ctrl_m3 versus MA0914.2 (ISL2); m=8/17; ncol2=6; w=0; offset=1; strand=D; shift=3; score=0.520318; ---CAmTTA--- ; cor=; Ncor= a 0 0 0 160.0 5631.0 3161.0 218.0 278.0 5631.0 0 0 0 c 0 0 0 5631.0 162.0 5631.0 130.0 718.0 206.0 0 0 0 g 0 0 0 126.0 134.0 171.0 169.0 13.0 59.0 0 0 0 t 0 0 0 1019.0 248.0 398.0 5631.0 5631.0 1354.0 0 0 0
MA0035.5_shift5 (GATA1)				; oligos_6nt_test_vs_ctrl_m3 versus MA0035.5 (GATA1); m=9/17; ncol2=7; w=0; offset=3; strand=D; shift=5; score=0.50095; -----CTWATCT ; cor=; Ncor= a 0 0 0 0 0 3953.0 1314.0 49692.0 67550.0 2206.0 2567.0 7397.0 c 0 0 0 0 0 62419.0 595.0 710.0 1292.0 1238.0 65937.0 3025.0 g 0 0 0 0 0 2712.0 652.0 856.0 988.0 618.0 1471.0 765.0 t 0 0 0 0 0 2744.0 69267.0 20570.0 1998.0 67766.0 1853.0 60641.0
MA1963.2_rc_shift6 (SATB1_rc)				; oligos_6nt_test_vs_ctrl_m3 versus MA1963.2_rc (SATB1_rc); m=10/17; ncol2=7; w=0; offset=4; strand=R; shift=6; score=0.439601; ------TTATTA ; cor=; Ncor= a 0 0 0 0 0 0 1612.0 841.0 33685.0 1281.0 169.0 33500.0 c 0 0 0 0 0 0 1071.0 889.0 123.0 120.0 221.0 37.0 g 0 0 0 0 0 0 881.0 485.0 128.0 115.0 164.0 195.0 t 0 0 0 0 0 0 30660.0 32009.0 288.0 32708.0 33670.0 492.0
MA1577.2_shift3 (TLX2)				; oligos_6nt_test_vs_ctrl_m3 versus MA1577.2 (TLX2); m=11/17; ncol2=6; w=0; offset=1; strand=D; shift=3; score=0.430997; ---yAATTA--- ; cor=; Ncor= a 0 0 0 1435.0 7799.0 7799.0 0.0 0.0 7799.0 0 0 0 c 0 0 0 7799.0 0.0 0.0 0.0 0.0 0.0 0 0 0 g 0 0 0 1112.0 80.0 0.0 0.0 0.0 0.0 0 0 0 t 0 0 0 8156.0 0.0 0.0 7799.0 7799.0 0.0 0 0 0
MA0125.2_rc_shift3 (Nobox_rc)				; oligos_6nt_test_vs_ctrl_m3 versus MA0125.2_rc (Nobox_rc); m=12/17; ncol2=6; w=0; offset=1; strand=R; shift=3; score=0.430333; ---yAATTA--- ; cor=; Ncor= a 0 0 0 1.0 32.0 34.0 0.0 2.0 37.0 0 0 0 c 0 0 0 22.0 4.0 2.0 0.0 0.0 0.0 0 0 0 g 0 0 0 0.0 0.0 1.0 0.0 0.0 1.0 0 0 0 t 0 0 0 15.0 2.0 1.0 38.0 36.0 0.0 0 0 0
MA0699.2_shift3 (LBX2)				; oligos_6nt_test_vs_ctrl_m3 versus MA0699.2 (LBX2); m=13/17; ncol2=6; w=0; offset=1; strand=D; shift=3; score=0.429145; ---yAATTA--- ; cor=; Ncor= a 0 0 0 157.0 2996.0 2996.0 0.0 150.0 2996.0 0 0 0 c 0 0 0 1634.0 338.0 290.0 29.0 258.0 34.0 0 0 0 g 0 0 0 109.0 325.0 130.0 118.0 293.0 106.0 0 0 0 t 0 0 0 1362.0 57.0 89.0 2996.0 2996.0 148.0 0 0 0
MA0654.2_shift3 (ISX)				; oligos_6nt_test_vs_ctrl_m3 versus MA0654.2 (ISX); m=14/17; ncol2=6; w=0; offset=1; strand=D; shift=3; score=0.425665; ---yAATTA--- ; cor=; Ncor= a 0 0 0 10.0 2065.0 2065.0 0.0 0.0 2065.0 0 0 0 c 0 0 0 1003.0 48.0 16.0 0.0 0.0 0.0 0 0 0 g 0 0 0 0.0 5.0 0.0 0.0 24.0 0.0 0 0 0 t 0 0 0 1061.0 24.0 10.0 2065.0 2065.0 49.0 0 0 0
MA0718.2_shift3 (RAX)				; oligos_6nt_test_vs_ctrl_m3 versus MA0718.2 (RAX); m=15/17; ncol2=6; w=0; offset=1; strand=D; shift=3; score=0.425221; ---yAATTA--- ; cor=; Ncor= a 0 0 0 214.0 2412.0 2412.0 123.0 71.0 2412.0 0 0 0 c 0 0 0 1281.0 17.0 38.0 0.0 71.0 0.0 0 0 0 g 0 0 0 25.0 3.0 12.0 0.0 49.0 20.0 0 0 0 t 0 0 0 1131.0 40.0 24.0 2412.0 2412.0 126.0 0 0 0
MA0894.2_rc_shift3 (HESX1_rc)				; oligos_6nt_test_vs_ctrl_m3 versus MA0894.2_rc (HESX1_rc); m=16/17; ncol2=6; w=0; offset=1; strand=R; shift=3; score=0.423552; ---yAATTA--- ; cor=; Ncor= a 0 0 0 97.0 4072.0 4072.0 0.0 31.0 4072.0 0 0 0 c 0 0 0 2180.0 0.0 15.0 9.0 53.0 34.0 0 0 0 g 0 0 0 38.0 15.0 0.0 7.0 0.0 0.0 0 0 0 t 0 0 0 1892.0 0.0 0.0 4072.0 4072.0 187.0 0 0 0
MA0890.2_shift3 (GBX2)				; oligos_6nt_test_vs_ctrl_m3 versus MA0890.2 (GBX2); m=17/17; ncol2=6; w=0; offset=1; strand=D; shift=3; score=0.420628; ---yAATTA--- ; cor=; Ncor= a 0 0 0 699.0 27366.0 27366.0 0.0 318.0 27366.0 0 0 0 c 0 0 0 15511.0 570.0 250.0 61.0 570.0 73.0 0 0 0 g 0 0 0 106.0 1113.0 114.0 65.0 673.0 30.0 0 0 0 t 0 0 0 11855.0 227.0 25.0 27366.0 27366.0 650.0 0 0 0