One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.145905_2026-01-05.145905_RyN7XF/results/discovered_motifs/oligos_6nt_test_vs_ctrl_m5/peak-motifs_oligos_6nt_test_vs_ctrl_m5.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.145905_2026-01-05.145905_RyN7XF/results/discovered_motifs/oligos_6nt_test_vs_ctrl_m5/peak-motifs_oligos_6nt_test_vs_ctrl_m5_vs_db_JASPAR2024_CORE_vertebrates_non-redundant

One-to-n matrix alignment; reference matrix: oligos_6nt_test_vs_ctrl_m5_shift3 ; 29 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_test_vs_ctrl_m5_shift3 (oligos_6nt_test_vs_ctrl_m5)
; oligos_6nt_test_vs_ctrl_m5; m=0 (reference); ncol1=11; shift=3; ncol=14; ---wwATGGTAAww ; Alignment reference a 0 0 0 3198 2713 7883 437 718 735 514 8171 7702 2874 2826 c 0 0 0 1346 1764 315 94 82 295 181 141 376 1820 1672 g 0 0 0 1798 1491 497 295 7861 7544 177 265 442 1540 1530 t 0 0 0 2821 3195 468 8337 502 589 8291 586 643 2929 3135

MA0786.2_shift3 (POU3F1)
; oligos_6nt_test_vs_ctrl_m5 versus MA0786.2 (POU3F1); m=1/28; ncol2=10; w=0; offset=0; strand=D; shift=3; score=0.679943; ---wTATGywAAT- ; cor=; Ncor= a 0 0 0 1034.0 505.0 2471.0 44.0 37.0 170.0 1423.0 2471.0 2471.0 259.0 0 c 0 0 0 126.0 186.0 7.0 53.0 13.0 2471.0 1.0 103.0 20.0 95.0 0 g 0 0 0 322.0 128.0 26.0 21.0 2471.0 413.0 21.0 130.0 25.0 128.0 0 t 0 0 0 1437.0 2471.0 21.0 2471.0 232.0 1119.0 1048.0 284.0 63.0 2471.0 0

MA0787.1_shift3 (POU3F2)
; oligos_6nt_test_vs_ctrl_m5 versus MA0787.1 (POU3F2); m=2/28; ncol2=12; w=0; offset=0; strand=D; shift=3; score=0.674102; ---wTATGCwAATk ; cor=; Ncor= a 0 0 0 591.0 163.0 1292.0 28.0 19.0 68.0 688.0 1292.0 1292.0 63.0 137.0 c 0 0 0 61.0 65.0 16.0 30.0 9.0 1292.0 4.0 16.0 6.0 19.0 165.0 g 0 0 0 171.0 40.0 25.0 12.0 1292.0 153.0 1.0 32.0 0.0 28.0 452.0 t 0 0 0 700.0 1292.0 0.0 1292.0 60.0 372.0 604.0 45.0 13.0 1292.0 840.0

MA0788.1_shift2 (POU3F3)
; oligos_6nt_test_vs_ctrl_m5 versus MA0788.1 (POU3F3); m=3/28; ncol2=13; w=-1; offset=-1; strand=D; shift=2; score=0.621615; --wwTATGCwAATt ; cor=; Ncor= a 0 0 576.0 440.0 129.0 1078.0 25.0 22.0 28.0 506.0 1078.0 1078.0 53.0 240.0 c 0 0 75.0 41.0 57.0 11.0 33.0 10.0 1078.0 4.0 11.0 6.0 20.0 141.0 g 0 0 137.0 131.0 64.0 12.0 49.0 1078.0 118.0 1.0 77.0 15.0 12.0 237.0 t 0 0 290.0 637.0 1078.0 30.0 1078.0 86.0 343.0 572.0 79.0 14.0 1078.0 1078.0

MA0792.1_shift4 (POU5F1B)
; oligos_6nt_test_vs_ctrl_m5 versus MA0792.1 (POU5F1B); m=4/28; ncol2=9; w=0; offset=1; strand=D; shift=4; score=0.591051; ----TATGywAAT- ; cor=; Ncor= a 0 0 0 0 1326.0 9519.0 171.0 322.0 398.0 6299.0 9519.0 9519.0 1559.0 0 c 0 0 0 0 1778.0 21.0 364.0 94.0 9519.0 51.0 144.0 65.0 537.0 0 g 0 0 0 0 808.0 67.0 206.0 9519.0 1293.0 65.0 856.0 97.0 750.0 0 t 0 0 0 0 9519.0 84.0 9519.0 1790.0 3828.0 3220.0 896.0 203.0 9519.0 0

MA0785.2_shift4 (POU2F1)
; oligos_6nt_test_vs_ctrl_m5 versus MA0785.2 (POU2F1); m=5/28; ncol2=9; w=0; offset=1; strand=D; shift=4; score=0.585891; ----TATGcwAAT- ; cor=; Ncor= a 0 0 0 0 756.0 10582.0 153.0 186.0 300.0 6932.0 10582.0 10582.0 1422.0 0 c 0 0 0 0 1347.0 12.0 501.0 82.0 10582.0 33.0 108.0 37.0 457.0 0 g 0 0 0 0 474.0 29.0 213.0 10582.0 1351.0 46.0 879.0 51.0 755.0 0 t 0 0 0 0 10582.0 43.0 10582.0 1326.0 3375.0 3651.0 787.0 158.0 10582.0 0

MA1525.3_shift5 (NFATC4)
; oligos_6nt_test_vs_ctrl_m5 versus MA1525.3 (NFATC4); m=6/28; ncol2=9; w=0; offset=2; strand=D; shift=5; score=0.584887; -----ayGGAAAmw ; cor=; Ncor= a 0 0 0 0 0 7139.0 16.0 0.0 0.0 7139.0 7139.0 7139.0 7139.0 2709.0 c 0 0 0 0 0 715.0 2586.0 0.0 0.0 0.0 0.0 460.0 6522.0 1280.0 g 0 0 0 0 0 2590.0 43.0 7139.0 7139.0 0.0 0.0 42.0 1149.0 138.0 t 0 0 0 0 0 1505.0 4553.0 0.0 0.0 0.0 0.0 107.0 1164.0 3012.0

MA0789.1_shift4 (POU3F4)
; oligos_6nt_test_vs_ctrl_m5 versus MA0789.1 (POU3F4); m=7/28; ncol2=9; w=0; offset=1; strand=D; shift=4; score=0.583534; ----TATGCwAAT- ; cor=; Ncor= a 0 0 0 0 941.0 11117.0 59.0 53.0 136.0 6447.0 11117.0 11117.0 705.0 0 c 0 0 0 0 349.0 23.0 59.0 19.0 11117.0 10.0 332.0 47.0 247.0 0 g 0 0 0 0 136.0 68.0 24.0 11117.0 602.0 56.0 315.0 88.0 292.0 0 t 0 0 0 0 11117.0 26.0 11117.0 245.0 2565.0 4670.0 885.0 168.0 11117.0 0

MA0152.3_shift4 (Nfatc2)
; oligos_6nt_test_vs_ctrl_m5 versus MA0152.3 (Nfatc2); m=8/28; ncol2=8; w=0; offset=1; strand=D; shift=4; score=0.560801; ----aATGGAAA-- ; cor=; Ncor= a 0 0 0 0 2166.0 2583.0 170.0 78.0 33.0 3095.0 3140.0 2944.0 0 0 c 0 0 0 0 460.0 206.0 124.0 17.0 27.0 38.0 19.0 104.0 0 0 g 0 0 0 0 292.0 329.0 101.0 3118.0 3133.0 65.0 45.0 79.0 0 0 t 0 0 0 0 321.0 121.0 2844.0 26.0 46.0 41.0 35.0 112.0 0 0

MA0606.3_shift5 (Nfat5)
; oligos_6nt_test_vs_ctrl_m5 versus MA0606.3 (Nfat5); m=9/28; ncol2=8; w=0; offset=2; strand=D; shift=5; score=0.54675; -----ATGGAAAA- ; cor=; Ncor= a 0 0 0 0 0 279.0 35.0 13.0 16.0 328.0 336.0 334.0 315.0 0 c 0 0 0 0 0 17.0 10.0 0.0 8.0 8.0 1.0 4.0 8.0 0 g 0 0 0 0 0 47.0 9.0 332.0 325.0 15.0 10.0 8.0 19.0 0 t 0 0 0 0 0 13.0 302.0 11.0 7.0 5.0 9.0 10.0 14.0 0

MA0461.3_rc_shift2 (Atoh1_rc)
; oligos_6nt_test_vs_ctrl_m5 versus MA0461.3_rc (Atoh1_rc); m=10/28; ncol2=8; w=-1; offset=-1; strand=R; shift=2; score=0.422637; --CATATGky---- ; cor=; Ncor= a 0 0 31.0 1027.0 0.0 1027.0 0.0 0.0 21.0 59.0 0 0 0 0 c 0 0 1027.0 5.0 0.0 136.0 34.0 8.0 149.0 372.0 0 0 0 0 g 0 0 1.0 4.0 74.0 10.0 20.0 1027.0 334.0 108.0 0 0 0 0 t 0 0 2.0 22.0 1027.0 17.0 1027.0 42.0 523.0 655.0 0 0 0 0

MA1116.2_shift6 (RBPJ)
; oligos_6nt_test_vs_ctrl_m5 versus MA1116.2 (RBPJ); m=11/28; ncol2=6; w=0; offset=3; strand=D; shift=6; score=0.420455; ------TGGGAA-- ; cor=; Ncor= a 0 0 0 0 0 0 2.0 35.0 9.0 7.0 2369.0 2382.0 0 0 c 0 0 0 0 0 0 12.0 25.0 20.0 8.0 0.0 15.0 0 0 g 0 0 0 0 0 0 2.0 2341.0 2313.0 2309.0 4.0 1.0 0 0 t 0 0 0 0 0 0 2386.0 1.0 60.0 78.0 29.0 4.0 0 0

MA1524.3_shift0 (Msgn1)
; oligos_6nt_test_vs_ctrl_m5 versus MA1524.3 (Msgn1); m=12/28; ncol2=10; w=-3; offset=-3; strand=D; shift=0; score= 0.4188; raCAAATGGy---- ; cor=; Ncor= a 193.0 363.0 0.0 537.0 460.0 537.0 18.0 1.0 5.0 37.0 0 0 0 0 c 21.0 128.0 539.0 3.0 8.0 4.0 6.0 2.0 8.0 140.0 0 0 0 0 g 324.0 46.0 2.0 0.0 52.0 0.0 3.0 531.0 512.0 50.0 0 0 0 0 t 4.0 5.0 1.0 2.0 22.0 1.0 515.0 8.0 17.0 315.0 0 0 0 0

MA0047.4_shift7 (FOXA2)
; oligos_6nt_test_vs_ctrl_m5 versus MA0047.4 (FOXA2); m=13/28; ncol2=8; w=0; offset=4; strand=D; shift=7; score=0.418516; -------wGTAAAC ; cor=; Ncor= a 0 0 0 0 0 0 0 93740.0 18770.0 3737.0 243805.0 223061.0 248214.0 2411.0 c 0 0 0 0 0 0 0 12432.0 2928.0 2037.0 9424.0 22429.0 3329.0 196969.0 g 0 0 0 0 0 0 0 38538.0 236311.0 1890.0 2641.0 6484.0 2805.0 3603.0 t 0 0 0 0 0 0 0 117443.0 4144.0 254489.0 6283.0 10179.0 7805.0 59170.0

MA0624.3_shift6 (Nfatc1)
; oligos_6nt_test_vs_ctrl_m5 versus MA0624.3 (Nfatc1); m=14/28; ncol2=6; w=0; offset=3; strand=D; shift=6; score=0.418344; ------TGGAAA-- ; cor=; Ncor= a 0 0 0 0 0 0 128.0 55.0 62.0 6080.0 6107.0 5947.0 0 0 c 0 0 0 0 0 0 227.0 13.0 16.0 30.0 13.0 77.0 0 0 g 0 0 0 0 0 0 65.0 6106.0 6058.0 27.0 32.0 43.0 0 0 t 0 0 0 0 0 0 5771.0 17.0 55.0 54.0 39.0 124.0 0 0

MA1568.2_rc_shift0 (TCF21_rc)
; oligos_6nt_test_vs_ctrl_m5 versus MA1568.2_rc (TCF21_rc); m=15/28; ncol2=10; w=-3; offset=-3; strand=R; shift=0; score=0.415987; rmCATATGGt---- ; cor=; Ncor= a 431.0 339.0 18.0 872.0 0.0 872.0 14.0 2.0 28.0 194.0 0 0 0 0 c 6.0 533.0 872.0 0.0 71.0 67.0 164.0 12.0 205.0 352.0 0 0 0 0 g 441.0 86.0 0.0 107.0 43.0 54.0 0.0 872.0 872.0 20.0 0 0 0 0 t 87.0 19.0 4.0 21.0 872.0 0.0 872.0 4.0 89.0 872.0 0 0 0 0

MA0678.1_rc_shift0 (OLIG2_rc)
; oligos_6nt_test_vs_ctrl_m5 versus MA0678.1_rc (OLIG2_rc); m=16/28; ncol2=10; w=-3; offset=-3; strand=R; shift=0; score=0.413127; rmCATATGkT---- ; cor=; Ncor= a 1609.0 744.0 117.0 1609.0 4.0 1609.0 22.0 0.0 16.0 108.0 0 0 0 0 c 57.0 866.0 1609.0 0.0 18.0 0.0 53.0 4.0 142.0 283.0 0 0 0 0 g 689.0 396.0 3.0 159.0 22.0 0.0 2.0 1609.0 929.0 90.0 0 0 0 0 t 146.0 4.0 10.0 21.0 1609.0 0.0 1609.0 74.0 680.0 1609.0 0 0 0 0

MA0031.2_shift8 (FOXD1)
; oligos_6nt_test_vs_ctrl_m5 versus MA0031.2 (FOXD1); m=17/28; ncol2=7; w=0; offset=5; strand=D; shift=8; score=0.411865; --------GTAAAC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1.0 0.0 19.0 20.0 18.0 1.0 c 0 0 0 0 0 0 0 0 1.0 0.0 1.0 0.0 1.0 18.0 g 0 0 0 0 0 0 0 0 17.0 0.0 0.0 0.0 1.0 0.0 t 0 0 0 0 0 0 0 0 1.0 20.0 0.0 0.0 0.0 1.0

MA0095.4_shift1 (Yy1)
; oligos_6nt_test_vs_ctrl_m5 versus MA0095.4 (Yy1); m=18/28; ncol2=8; w=-2; offset=-2; strand=D; shift=1; score=0.411112; -CAAAATGG----- ; cor=; Ncor= a 0 3123.0 41529.0 39666.0 30769.0 41506.0 689.0 561.0 1597.0 0 0 0 0 0 c 0 33122.0 926.0 1447.0 2536.0 746.0 241.0 165.0 971.0 0 0 0 0 0 g 0 3684.0 287.0 1320.0 8658.0 712.0 708.0 42263.0 39612.0 0 0 0 0 0 t 0 3419.0 606.0 915.0 1385.0 384.0 41710.0 359.0 1168.0 0 0 0 0 0

MA0042.2_shift8 (FOXI1)
; oligos_6nt_test_vs_ctrl_m5 versus MA0042.2 (FOXI1); m=19/28; ncol2=7; w=0; offset=5; strand=D; shift=8; score=0.410268; --------GTAAAC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 618.0 74.0 5175.0 5175.0 5175.0 157.0 c 0 0 0 0 0 0 0 0 39.0 60.0 540.0 23.0 23.0 5175.0 g 0 0 0 0 0 0 0 0 5175.0 35.0 37.0 0.0 29.0 48.0 t 0 0 0 0 0 0 0 0 0.0 5175.0 0.0 0.0 66.0 810.0

MA1608.2_rc_shift2 (Isl1_rc)
; oligos_6nt_test_vs_ctrl_m5 versus MA1608.2_rc (Isl1_rc); m=20/28; ncol2=7; w=-1; offset=-1; strand=R; shift=2; score=0.410076; --cTAATGG----- ; cor=; Ncor= a 0 0 436.0 110.0 5430.0 5482.0 32.0 266.0 379.0 0 0 0 0 0 c 0 0 3702.0 20.0 39.0 34.0 99.0 54.0 192.0 0 0 0 0 0 g 0 0 410.0 45.0 104.0 54.0 30.0 4885.0 4710.0 0 0 0 0 0 t 0 0 1089.0 5462.0 64.0 67.0 5476.0 432.0 356.0 0 0 0 0 0

MA1683.2_shift8 (FOXA3)
; oligos_6nt_test_vs_ctrl_m5 versus MA1683.2 (FOXA3); m=21/28; ncol2=7; w=0; offset=5; strand=D; shift=8; score=0.410028; --------GTAAAC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 4481.0 758.0 45178.0 43099.0 46046.0 951.0 c 0 0 0 0 0 0 0 0 1464.0 903.0 1980.0 3883.0 973.0 39509.0 g 0 0 0 0 0 0 0 0 40396.0 690.0 636.0 977.0 934.0 1205.0 t 0 0 0 0 0 0 0 0 2596.0 46586.0 1143.0 978.0 984.0 7272.0

MA0607.2_rc_shift0 (BHLHA15_rc)
; oligos_6nt_test_vs_ctrl_m5 versus MA0607.2_rc (BHLHA15_rc); m=22/28; ncol2=10; w=-3; offset=-3; strand=R; shift=0; score=0.409526; aCCATATGGt---- ; cor=; Ncor= a 8119.0 2784.0 38.0 11369.0 0.0 11369.0 44.0 0.0 33.0 1748.0 0 0 0 0 c 772.0 8585.0 11369.0 6.0 56.0 392.0 215.0 0.0 774.0 3272.0 0 0 0 0 g 3251.0 778.0 0.0 223.0 373.0 59.0 14.0 11369.0 8626.0 757.0 0 0 0 0 t 1749.0 37.0 0.0 50.0 11369.0 0.0 11369.0 41.0 2744.0 8097.0 0 0 0 0

MA0827.1_rc_shift0 (OLIG3_rc)
; oligos_6nt_test_vs_ctrl_m5 versus MA0827.1_rc (OLIG3_rc); m=23/28; ncol2=10; w=-3; offset=-3; strand=R; shift=0; score=0.409512; rvCATATGkT---- ; cor=; Ncor= a 1915.0 1010.0 275.0 1915.0 0.0 1915.0 22.0 3.0 6.0 132.0 0 0 0 0 c 176.0 904.0 1915.0 2.0 11.0 72.0 99.0 0.0 208.0 427.0 0 0 0 0 g 964.0 662.0 4.0 224.0 103.0 26.0 10.0 1915.0 1115.0 204.0 0 0 0 0 t 265.0 28.0 4.0 56.0 1915.0 0.0 1915.0 222.0 800.0 1915.0 0 0 0 0

MA0481.4_shift8 (FOXP1)
; oligos_6nt_test_vs_ctrl_m5 versus MA0481.4 (FOXP1); m=24/28; ncol2=7; w=0; offset=5; strand=D; shift=8; score=0.408629; --------GTAAAC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10463.0 1209.0 69603.0 65236.0 70030.0 1336.0 c 0 0 0 0 0 0 0 0 1573.0 727.0 2095.0 5067.0 1487.0 61094.0 g 0 0 0 0 0 0 0 0 59571.0 920.0 1073.0 1830.0 1132.0 1493.0 t 0 0 0 0 0 0 0 0 3111.0 71862.0 1947.0 2585.0 2069.0 10795.0

MA0818.2_rc_shift0 (BHLHE22_rc)
; oligos_6nt_test_vs_ctrl_m5 versus MA0818.2_rc (BHLHE22_rc); m=25/28; ncol2=10; w=-3; offset=-3; strand=R; shift=0; score=0.408003; rmCATATGkT---- ; cor=; Ncor= a 5142.0 3086.0 0.0 8662.0 0.0 8662.0 80.0 0.0 56.0 765.0 0 0 0 0 c 280.0 4007.0 8662.0 0.0 44.0 75.0 850.0 0.0 1530.0 557.0 0 0 0 0 g 3520.0 1481.0 0.0 808.0 44.0 59.0 0.0 8662.0 3954.0 491.0 0 0 0 0 t 448.0 89.0 0.0 90.0 8662.0 0.0 8662.0 0.0 3121.0 8662.0 0 0 0 0

MA1467.3_shift2 (Atoh1)
; oligos_6nt_test_vs_ctrl_m5 versus MA1467.3 (Atoh1); m=26/28; ncol2=7; w=-1; offset=-1; strand=D; shift=2; score=0.40209; --CAGATGG----- ; cor=; Ncor= a 0 0 273.0 20977.0 165.0 21079.0 117.0 280.0 1158.0 0 0 0 0 0 c 0 0 20657.0 170.0 425.0 115.0 552.0 159.0 2163.0 0 0 0 0 0 g 0 0 208.0 257.0 18911.0 189.0 99.0 20837.0 15743.0 0 0 0 0 0 t 0 0 339.0 73.0 1976.0 94.0 20709.0 201.0 2413.0 0 0 0 0 0

MA1103.3_shift8 (FOXK2)
; oligos_6nt_test_vs_ctrl_m5 versus MA1103.3 (FOXK2); m=27/28; ncol2=7; w=0; offset=5; strand=D; shift=8; score=0.401659; --------GTAAAC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2697.0 360.0 15913.0 14387.0 15593.0 499.0 c 0 0 0 0 0 0 0 0 551.0 210.0 277.0 1291.0 330.0 14282.0 g 0 0 0 0 0 0 0 0 12737.0 327.0 148.0 436.0 391.0 426.0 t 0 0 0 0 0 0 0 0 694.0 15782.0 341.0 565.0 365.0 1472.0

MA2117.1_shift8 (FOXP4)
; oligos_6nt_test_vs_ctrl_m5 versus MA2117.1 (FOXP4); m=28/28; ncol2=7; w=0; offset=5; strand=D; shift=8; score=0.400927; --------GTAAAC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2224.0 543.0 19122.0 19613.0 20280.0 379.0 c 0 0 0 0 0 0 0 0 834.0 793.0 1545.0 1330.0 419.0 18349.0 g 0 0 0 0 0 0 0 0 17315.0 539.0 534.0 368.0 550.0 493.0 t 0 0 0 0 0 0 0 0 1294.0 19792.0 466.0 356.0 418.0 2446.0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_test_vs_ctrl_m5_shift3 (oligos_6nt_test_vs_ctrl_m5)				; oligos_6nt_test_vs_ctrl_m5; m=0 (reference); ncol1=11; shift=3; ncol=14; ---wwATGGTAAww ; Alignment reference a 0 0 0 3198 2713 7883 437 718 735 514 8171 7702 2874 2826 c 0 0 0 1346 1764 315 94 82 295 181 141 376 1820 1672 g 0 0 0 1798 1491 497 295 7861 7544 177 265 442 1540 1530 t 0 0 0 2821 3195 468 8337 502 589 8291 586 643 2929 3135
MA0786.2_shift3 (POU3F1)				; oligos_6nt_test_vs_ctrl_m5 versus MA0786.2 (POU3F1); m=1/28; ncol2=10; w=0; offset=0; strand=D; shift=3; score=0.679943; ---wTATGywAAT- ; cor=; Ncor= a 0 0 0 1034.0 505.0 2471.0 44.0 37.0 170.0 1423.0 2471.0 2471.0 259.0 0 c 0 0 0 126.0 186.0 7.0 53.0 13.0 2471.0 1.0 103.0 20.0 95.0 0 g 0 0 0 322.0 128.0 26.0 21.0 2471.0 413.0 21.0 130.0 25.0 128.0 0 t 0 0 0 1437.0 2471.0 21.0 2471.0 232.0 1119.0 1048.0 284.0 63.0 2471.0 0
MA0787.1_shift3 (POU3F2)				; oligos_6nt_test_vs_ctrl_m5 versus MA0787.1 (POU3F2); m=2/28; ncol2=12; w=0; offset=0; strand=D; shift=3; score=0.674102; ---wTATGCwAATk ; cor=; Ncor= a 0 0 0 591.0 163.0 1292.0 28.0 19.0 68.0 688.0 1292.0 1292.0 63.0 137.0 c 0 0 0 61.0 65.0 16.0 30.0 9.0 1292.0 4.0 16.0 6.0 19.0 165.0 g 0 0 0 171.0 40.0 25.0 12.0 1292.0 153.0 1.0 32.0 0.0 28.0 452.0 t 0 0 0 700.0 1292.0 0.0 1292.0 60.0 372.0 604.0 45.0 13.0 1292.0 840.0
MA0788.1_shift2 (POU3F3)				; oligos_6nt_test_vs_ctrl_m5 versus MA0788.1 (POU3F3); m=3/28; ncol2=13; w=-1; offset=-1; strand=D; shift=2; score=0.621615; --wwTATGCwAATt ; cor=; Ncor= a 0 0 576.0 440.0 129.0 1078.0 25.0 22.0 28.0 506.0 1078.0 1078.0 53.0 240.0 c 0 0 75.0 41.0 57.0 11.0 33.0 10.0 1078.0 4.0 11.0 6.0 20.0 141.0 g 0 0 137.0 131.0 64.0 12.0 49.0 1078.0 118.0 1.0 77.0 15.0 12.0 237.0 t 0 0 290.0 637.0 1078.0 30.0 1078.0 86.0 343.0 572.0 79.0 14.0 1078.0 1078.0
MA0792.1_shift4 (POU5F1B)				; oligos_6nt_test_vs_ctrl_m5 versus MA0792.1 (POU5F1B); m=4/28; ncol2=9; w=0; offset=1; strand=D; shift=4; score=0.591051; ----TATGywAAT- ; cor=; Ncor= a 0 0 0 0 1326.0 9519.0 171.0 322.0 398.0 6299.0 9519.0 9519.0 1559.0 0 c 0 0 0 0 1778.0 21.0 364.0 94.0 9519.0 51.0 144.0 65.0 537.0 0 g 0 0 0 0 808.0 67.0 206.0 9519.0 1293.0 65.0 856.0 97.0 750.0 0 t 0 0 0 0 9519.0 84.0 9519.0 1790.0 3828.0 3220.0 896.0 203.0 9519.0 0
MA0785.2_shift4 (POU2F1)				; oligos_6nt_test_vs_ctrl_m5 versus MA0785.2 (POU2F1); m=5/28; ncol2=9; w=0; offset=1; strand=D; shift=4; score=0.585891; ----TATGcwAAT- ; cor=; Ncor= a 0 0 0 0 756.0 10582.0 153.0 186.0 300.0 6932.0 10582.0 10582.0 1422.0 0 c 0 0 0 0 1347.0 12.0 501.0 82.0 10582.0 33.0 108.0 37.0 457.0 0 g 0 0 0 0 474.0 29.0 213.0 10582.0 1351.0 46.0 879.0 51.0 755.0 0 t 0 0 0 0 10582.0 43.0 10582.0 1326.0 3375.0 3651.0 787.0 158.0 10582.0 0
MA1525.3_shift5 (NFATC4)				; oligos_6nt_test_vs_ctrl_m5 versus MA1525.3 (NFATC4); m=6/28; ncol2=9; w=0; offset=2; strand=D; shift=5; score=0.584887; -----ayGGAAAmw ; cor=; Ncor= a 0 0 0 0 0 7139.0 16.0 0.0 0.0 7139.0 7139.0 7139.0 7139.0 2709.0 c 0 0 0 0 0 715.0 2586.0 0.0 0.0 0.0 0.0 460.0 6522.0 1280.0 g 0 0 0 0 0 2590.0 43.0 7139.0 7139.0 0.0 0.0 42.0 1149.0 138.0 t 0 0 0 0 0 1505.0 4553.0 0.0 0.0 0.0 0.0 107.0 1164.0 3012.0
MA0789.1_shift4 (POU3F4)				; oligos_6nt_test_vs_ctrl_m5 versus MA0789.1 (POU3F4); m=7/28; ncol2=9; w=0; offset=1; strand=D; shift=4; score=0.583534; ----TATGCwAAT- ; cor=; Ncor= a 0 0 0 0 941.0 11117.0 59.0 53.0 136.0 6447.0 11117.0 11117.0 705.0 0 c 0 0 0 0 349.0 23.0 59.0 19.0 11117.0 10.0 332.0 47.0 247.0 0 g 0 0 0 0 136.0 68.0 24.0 11117.0 602.0 56.0 315.0 88.0 292.0 0 t 0 0 0 0 11117.0 26.0 11117.0 245.0 2565.0 4670.0 885.0 168.0 11117.0 0
MA0152.3_shift4 (Nfatc2)				; oligos_6nt_test_vs_ctrl_m5 versus MA0152.3 (Nfatc2); m=8/28; ncol2=8; w=0; offset=1; strand=D; shift=4; score=0.560801; ----aATGGAAA-- ; cor=; Ncor= a 0 0 0 0 2166.0 2583.0 170.0 78.0 33.0 3095.0 3140.0 2944.0 0 0 c 0 0 0 0 460.0 206.0 124.0 17.0 27.0 38.0 19.0 104.0 0 0 g 0 0 0 0 292.0 329.0 101.0 3118.0 3133.0 65.0 45.0 79.0 0 0 t 0 0 0 0 321.0 121.0 2844.0 26.0 46.0 41.0 35.0 112.0 0 0
MA0606.3_shift5 (Nfat5)				; oligos_6nt_test_vs_ctrl_m5 versus MA0606.3 (Nfat5); m=9/28; ncol2=8; w=0; offset=2; strand=D; shift=5; score=0.54675; -----ATGGAAAA- ; cor=; Ncor= a 0 0 0 0 0 279.0 35.0 13.0 16.0 328.0 336.0 334.0 315.0 0 c 0 0 0 0 0 17.0 10.0 0.0 8.0 8.0 1.0 4.0 8.0 0 g 0 0 0 0 0 47.0 9.0 332.0 325.0 15.0 10.0 8.0 19.0 0 t 0 0 0 0 0 13.0 302.0 11.0 7.0 5.0 9.0 10.0 14.0 0
MA0461.3_rc_shift2 (Atoh1_rc)				; oligos_6nt_test_vs_ctrl_m5 versus MA0461.3_rc (Atoh1_rc); m=10/28; ncol2=8; w=-1; offset=-1; strand=R; shift=2; score=0.422637; --CATATGky---- ; cor=; Ncor= a 0 0 31.0 1027.0 0.0 1027.0 0.0 0.0 21.0 59.0 0 0 0 0 c 0 0 1027.0 5.0 0.0 136.0 34.0 8.0 149.0 372.0 0 0 0 0 g 0 0 1.0 4.0 74.0 10.0 20.0 1027.0 334.0 108.0 0 0 0 0 t 0 0 2.0 22.0 1027.0 17.0 1027.0 42.0 523.0 655.0 0 0 0 0
MA1116.2_shift6 (RBPJ)				; oligos_6nt_test_vs_ctrl_m5 versus MA1116.2 (RBPJ); m=11/28; ncol2=6; w=0; offset=3; strand=D; shift=6; score=0.420455; ------TGGGAA-- ; cor=; Ncor= a 0 0 0 0 0 0 2.0 35.0 9.0 7.0 2369.0 2382.0 0 0 c 0 0 0 0 0 0 12.0 25.0 20.0 8.0 0.0 15.0 0 0 g 0 0 0 0 0 0 2.0 2341.0 2313.0 2309.0 4.0 1.0 0 0 t 0 0 0 0 0 0 2386.0 1.0 60.0 78.0 29.0 4.0 0 0
MA1524.3_shift0 (Msgn1)				; oligos_6nt_test_vs_ctrl_m5 versus MA1524.3 (Msgn1); m=12/28; ncol2=10; w=-3; offset=-3; strand=D; shift=0; score= 0.4188; raCAAATGGy---- ; cor=; Ncor= a 193.0 363.0 0.0 537.0 460.0 537.0 18.0 1.0 5.0 37.0 0 0 0 0 c 21.0 128.0 539.0 3.0 8.0 4.0 6.0 2.0 8.0 140.0 0 0 0 0 g 324.0 46.0 2.0 0.0 52.0 0.0 3.0 531.0 512.0 50.0 0 0 0 0 t 4.0 5.0 1.0 2.0 22.0 1.0 515.0 8.0 17.0 315.0 0 0 0 0
MA0047.4_shift7 (FOXA2)				; oligos_6nt_test_vs_ctrl_m5 versus MA0047.4 (FOXA2); m=13/28; ncol2=8; w=0; offset=4; strand=D; shift=7; score=0.418516; -------wGTAAAC ; cor=; Ncor= a 0 0 0 0 0 0 0 93740.0 18770.0 3737.0 243805.0 223061.0 248214.0 2411.0 c 0 0 0 0 0 0 0 12432.0 2928.0 2037.0 9424.0 22429.0 3329.0 196969.0 g 0 0 0 0 0 0 0 38538.0 236311.0 1890.0 2641.0 6484.0 2805.0 3603.0 t 0 0 0 0 0 0 0 117443.0 4144.0 254489.0 6283.0 10179.0 7805.0 59170.0
MA0624.3_shift6 (Nfatc1)				; oligos_6nt_test_vs_ctrl_m5 versus MA0624.3 (Nfatc1); m=14/28; ncol2=6; w=0; offset=3; strand=D; shift=6; score=0.418344; ------TGGAAA-- ; cor=; Ncor= a 0 0 0 0 0 0 128.0 55.0 62.0 6080.0 6107.0 5947.0 0 0 c 0 0 0 0 0 0 227.0 13.0 16.0 30.0 13.0 77.0 0 0 g 0 0 0 0 0 0 65.0 6106.0 6058.0 27.0 32.0 43.0 0 0 t 0 0 0 0 0 0 5771.0 17.0 55.0 54.0 39.0 124.0 0 0
MA1568.2_rc_shift0 (TCF21_rc)				; oligos_6nt_test_vs_ctrl_m5 versus MA1568.2_rc (TCF21_rc); m=15/28; ncol2=10; w=-3; offset=-3; strand=R; shift=0; score=0.415987; rmCATATGGt---- ; cor=; Ncor= a 431.0 339.0 18.0 872.0 0.0 872.0 14.0 2.0 28.0 194.0 0 0 0 0 c 6.0 533.0 872.0 0.0 71.0 67.0 164.0 12.0 205.0 352.0 0 0 0 0 g 441.0 86.0 0.0 107.0 43.0 54.0 0.0 872.0 872.0 20.0 0 0 0 0 t 87.0 19.0 4.0 21.0 872.0 0.0 872.0 4.0 89.0 872.0 0 0 0 0
MA0678.1_rc_shift0 (OLIG2_rc)				; oligos_6nt_test_vs_ctrl_m5 versus MA0678.1_rc (OLIG2_rc); m=16/28; ncol2=10; w=-3; offset=-3; strand=R; shift=0; score=0.413127; rmCATATGkT---- ; cor=; Ncor= a 1609.0 744.0 117.0 1609.0 4.0 1609.0 22.0 0.0 16.0 108.0 0 0 0 0 c 57.0 866.0 1609.0 0.0 18.0 0.0 53.0 4.0 142.0 283.0 0 0 0 0 g 689.0 396.0 3.0 159.0 22.0 0.0 2.0 1609.0 929.0 90.0 0 0 0 0 t 146.0 4.0 10.0 21.0 1609.0 0.0 1609.0 74.0 680.0 1609.0 0 0 0 0
MA0031.2_shift8 (FOXD1)				; oligos_6nt_test_vs_ctrl_m5 versus MA0031.2 (FOXD1); m=17/28; ncol2=7; w=0; offset=5; strand=D; shift=8; score=0.411865; --------GTAAAC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1.0 0.0 19.0 20.0 18.0 1.0 c 0 0 0 0 0 0 0 0 1.0 0.0 1.0 0.0 1.0 18.0 g 0 0 0 0 0 0 0 0 17.0 0.0 0.0 0.0 1.0 0.0 t 0 0 0 0 0 0 0 0 1.0 20.0 0.0 0.0 0.0 1.0
MA0095.4_shift1 (Yy1)				; oligos_6nt_test_vs_ctrl_m5 versus MA0095.4 (Yy1); m=18/28; ncol2=8; w=-2; offset=-2; strand=D; shift=1; score=0.411112; -CAAAATGG----- ; cor=; Ncor= a 0 3123.0 41529.0 39666.0 30769.0 41506.0 689.0 561.0 1597.0 0 0 0 0 0 c 0 33122.0 926.0 1447.0 2536.0 746.0 241.0 165.0 971.0 0 0 0 0 0 g 0 3684.0 287.0 1320.0 8658.0 712.0 708.0 42263.0 39612.0 0 0 0 0 0 t 0 3419.0 606.0 915.0 1385.0 384.0 41710.0 359.0 1168.0 0 0 0 0 0
MA0042.2_shift8 (FOXI1)				; oligos_6nt_test_vs_ctrl_m5 versus MA0042.2 (FOXI1); m=19/28; ncol2=7; w=0; offset=5; strand=D; shift=8; score=0.410268; --------GTAAAC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 618.0 74.0 5175.0 5175.0 5175.0 157.0 c 0 0 0 0 0 0 0 0 39.0 60.0 540.0 23.0 23.0 5175.0 g 0 0 0 0 0 0 0 0 5175.0 35.0 37.0 0.0 29.0 48.0 t 0 0 0 0 0 0 0 0 0.0 5175.0 0.0 0.0 66.0 810.0
MA1608.2_rc_shift2 (Isl1_rc)				; oligos_6nt_test_vs_ctrl_m5 versus MA1608.2_rc (Isl1_rc); m=20/28; ncol2=7; w=-1; offset=-1; strand=R; shift=2; score=0.410076; --cTAATGG----- ; cor=; Ncor= a 0 0 436.0 110.0 5430.0 5482.0 32.0 266.0 379.0 0 0 0 0 0 c 0 0 3702.0 20.0 39.0 34.0 99.0 54.0 192.0 0 0 0 0 0 g 0 0 410.0 45.0 104.0 54.0 30.0 4885.0 4710.0 0 0 0 0 0 t 0 0 1089.0 5462.0 64.0 67.0 5476.0 432.0 356.0 0 0 0 0 0
MA1683.2_shift8 (FOXA3)				; oligos_6nt_test_vs_ctrl_m5 versus MA1683.2 (FOXA3); m=21/28; ncol2=7; w=0; offset=5; strand=D; shift=8; score=0.410028; --------GTAAAC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 4481.0 758.0 45178.0 43099.0 46046.0 951.0 c 0 0 0 0 0 0 0 0 1464.0 903.0 1980.0 3883.0 973.0 39509.0 g 0 0 0 0 0 0 0 0 40396.0 690.0 636.0 977.0 934.0 1205.0 t 0 0 0 0 0 0 0 0 2596.0 46586.0 1143.0 978.0 984.0 7272.0
MA0607.2_rc_shift0 (BHLHA15_rc)				; oligos_6nt_test_vs_ctrl_m5 versus MA0607.2_rc (BHLHA15_rc); m=22/28; ncol2=10; w=-3; offset=-3; strand=R; shift=0; score=0.409526; aCCATATGGt---- ; cor=; Ncor= a 8119.0 2784.0 38.0 11369.0 0.0 11369.0 44.0 0.0 33.0 1748.0 0 0 0 0 c 772.0 8585.0 11369.0 6.0 56.0 392.0 215.0 0.0 774.0 3272.0 0 0 0 0 g 3251.0 778.0 0.0 223.0 373.0 59.0 14.0 11369.0 8626.0 757.0 0 0 0 0 t 1749.0 37.0 0.0 50.0 11369.0 0.0 11369.0 41.0 2744.0 8097.0 0 0 0 0
MA0827.1_rc_shift0 (OLIG3_rc)				; oligos_6nt_test_vs_ctrl_m5 versus MA0827.1_rc (OLIG3_rc); m=23/28; ncol2=10; w=-3; offset=-3; strand=R; shift=0; score=0.409512; rvCATATGkT---- ; cor=; Ncor= a 1915.0 1010.0 275.0 1915.0 0.0 1915.0 22.0 3.0 6.0 132.0 0 0 0 0 c 176.0 904.0 1915.0 2.0 11.0 72.0 99.0 0.0 208.0 427.0 0 0 0 0 g 964.0 662.0 4.0 224.0 103.0 26.0 10.0 1915.0 1115.0 204.0 0 0 0 0 t 265.0 28.0 4.0 56.0 1915.0 0.0 1915.0 222.0 800.0 1915.0 0 0 0 0
MA0481.4_shift8 (FOXP1)				; oligos_6nt_test_vs_ctrl_m5 versus MA0481.4 (FOXP1); m=24/28; ncol2=7; w=0; offset=5; strand=D; shift=8; score=0.408629; --------GTAAAC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10463.0 1209.0 69603.0 65236.0 70030.0 1336.0 c 0 0 0 0 0 0 0 0 1573.0 727.0 2095.0 5067.0 1487.0 61094.0 g 0 0 0 0 0 0 0 0 59571.0 920.0 1073.0 1830.0 1132.0 1493.0 t 0 0 0 0 0 0 0 0 3111.0 71862.0 1947.0 2585.0 2069.0 10795.0
MA0818.2_rc_shift0 (BHLHE22_rc)				; oligos_6nt_test_vs_ctrl_m5 versus MA0818.2_rc (BHLHE22_rc); m=25/28; ncol2=10; w=-3; offset=-3; strand=R; shift=0; score=0.408003; rmCATATGkT---- ; cor=; Ncor= a 5142.0 3086.0 0.0 8662.0 0.0 8662.0 80.0 0.0 56.0 765.0 0 0 0 0 c 280.0 4007.0 8662.0 0.0 44.0 75.0 850.0 0.0 1530.0 557.0 0 0 0 0 g 3520.0 1481.0 0.0 808.0 44.0 59.0 0.0 8662.0 3954.0 491.0 0 0 0 0 t 448.0 89.0 0.0 90.0 8662.0 0.0 8662.0 0.0 3121.0 8662.0 0 0 0 0
MA1467.3_shift2 (Atoh1)				; oligos_6nt_test_vs_ctrl_m5 versus MA1467.3 (Atoh1); m=26/28; ncol2=7; w=-1; offset=-1; strand=D; shift=2; score=0.40209; --CAGATGG----- ; cor=; Ncor= a 0 0 273.0 20977.0 165.0 21079.0 117.0 280.0 1158.0 0 0 0 0 0 c 0 0 20657.0 170.0 425.0 115.0 552.0 159.0 2163.0 0 0 0 0 0 g 0 0 208.0 257.0 18911.0 189.0 99.0 20837.0 15743.0 0 0 0 0 0 t 0 0 339.0 73.0 1976.0 94.0 20709.0 201.0 2413.0 0 0 0 0 0
MA1103.3_shift8 (FOXK2)				; oligos_6nt_test_vs_ctrl_m5 versus MA1103.3 (FOXK2); m=27/28; ncol2=7; w=0; offset=5; strand=D; shift=8; score=0.401659; --------GTAAAC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2697.0 360.0 15913.0 14387.0 15593.0 499.0 c 0 0 0 0 0 0 0 0 551.0 210.0 277.0 1291.0 330.0 14282.0 g 0 0 0 0 0 0 0 0 12737.0 327.0 148.0 436.0 391.0 426.0 t 0 0 0 0 0 0 0 0 694.0 15782.0 341.0 565.0 365.0 1472.0
MA2117.1_shift8 (FOXP4)				; oligos_6nt_test_vs_ctrl_m5 versus MA2117.1 (FOXP4); m=28/28; ncol2=7; w=0; offset=5; strand=D; shift=8; score=0.400927; --------GTAAAC ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2224.0 543.0 19122.0 19613.0 20280.0 379.0 c 0 0 0 0 0 0 0 0 834.0 793.0 1545.0 1330.0 419.0 18349.0 g 0 0 0 0 0 0 0 0 17315.0 539.0 534.0 368.0 550.0 493.0 t 0 0 0 0 0 0 0 0 1294.0 19792.0 466.0 356.0 418.0 2446.0