; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	13	10	1	4	2	4	1	42	41	42	16	15
c	13	11	32	1	0	1	36	1	0	1	8	10
g	6	7	6	0	3	4	4	0	1	0	9	10
t	12	16	5	39	39	35	3	1	2	1	11	9
//
; Sites	44
>site_0
TGCTATCAAAGA
>site_1
CATTTTCAAACA
>site_2
CACTTTAAAAAG
>site_3
CTCCTTCAAAAG
>site_4
ATCTTACAAAAG
>site_5
TGCTTTTAAAAA
>site_6
CTGTTTCAAAGG
>site_7
ACCTTTGAAACA
>site_8
ATCTTGCAAAGA
>site_9
AACTTGCAAAAC
>site_10
ATCTGTCAAACA
>site_11
CCTTTTCAAACT
>site_12
CCCTTTCAGATC
>site_13
AGCTTTCCAAGT
>site_14
GTCTTTCAAAAC
>site_15
TTCTTACAAAAA
>site_16
CTCTTTTAAATA
>site_17
AAGTTTCAAAAC
>site_18
TTCATTCAAATT
>site_19
AGCATTCAAAGT
>site_20
CTCTTACAAAAC
>site_21
TTCTTTGAAACC
>site_22
GGGTTTCAAAGA
>site_23
CCCTTCCAAACC
>site_24
TGCTTGCAAATA
>site_25
TACATTCAAATG
>site_26
ATATTTGAAAAT
>site_27
AATTTTCAAATA
>site_28
AAGTTTCAAACC
>site_29
ACGTTTCATAAT
>site_30
TTGTGTCAAATA
>site_31
GGCTATCAAAAG
>site_32
CCCTTTCAATTC
>site_33
CCCTTACAAAAT
>site_34
GCCTTTCAACGG
>site_35
CACTTTTAAAAA
>site_36
CTCTTGCAAAAG
>site_37
AACTTTCTAATC
>site_38
TCCTGTCAAATA
>site_39
TTCTTTCATATT
>site_40
GCCATTCAAAGG
>site_41
TATTTTCAAACT
>site_42
TTTTTTCAAAGG
>site_43
GCCTTTGAAAAA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_6nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_6nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m1_rc.png
;
a	14	11	33	33	38	3	0	5	4	1	12	11	11
c	11	10	3	3	3	3	0	2	0	2	9	7	7
g	5	10	2	2	0	33	4	0	1	1	13	9	14
t	11	10	3	3	0	2	37	34	36	37	7	14	9
//
; Sites	41
>site_0
ACGTAGTTTTGTA
>site_1
GGACAGTTTTCGG
>site_2
CTAGAGTTTTTAG
>site_3
AGAAAGTCTTCTC
>site_4
AAAAAGTATTCAG
>site_5
AGTAAGTTTTAGT
>site_6
TTAACGTATTGGT
>site_7
CATAAGTTATGGA
>site_8
TCAAAGGTTTAAA
>site_9
AGATAGTTTTGTA
>site_10
ACACAGTTTTAAG
>site_11
ATCAAGTTTTGCA
>site_12
ACAAATTTTTTTC
>site_13
TGAAAGTTATCTG
>site_14
TAGAAGTTTTAGT
>site_15
CAAGAGTTTTCAG
>site_16
CCAAAGTTTCATA
>site_17
GCCAAGTTTTTGC
>site_18
CCCAAGTTTTATA
>site_19
TCAACGTTTTTCT
>site_20
AATAAGTTTTTCT
>site_21
TTAAAATTTTCAA
>site_22
TGAAAATTTTAAT
>site_23
ATAAAGTATATAG
>site_24
TGAAAGTTTTAGT
>site_25
GTACAGTTTTATT
>site_26
TTAAAATATTGTG
>site_27
ACAAAGTTTTGCT
>site_28
ACAAACTTTTCAA
>site_29
GAAAAGTTTGTCA
>site_30
CAATAGTTATGAG
>site_31
CTAAATTTATGAG
>site_32
TTAAAGTAGTGTA
>site_33
CGAAAGGTTTCTC
>site_34
ATAAAGGTTTATC
>site_35
CAAAAGTTTCCCC
>site_36
GGAAACTTTTGTC
>site_37
CGAACGTCTTGCG
>site_38
AAAAAGGTTTAGG
>site_39
TAAAAGTTTTGGG
>site_40
CAAAACTTTTATG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_6nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_6nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m2_rc.png
;
a	13	16	41	1	2	44	3	46	46	16	17
c	17	15	5	1	0	5	46	3	0	15	10
g	12	15	2	4	48	1	2	2	4	11	16
t	10	6	4	46	2	2	1	1	2	10	9
//
; Sites	52
>site_0
TAATGGCAACC
>site_1
TCATGACAACA
>site_2
AGATGCCAAGT
>site_3
CCATGACCATG
>site_4
ACGTGACAAGA
>site_5
GCATTACAAAG
>site_6
CCATGACGACT
>site_7
ACATGATAACG
>site_8
AGATGACATCA
>site_9
CAATGAGAAAA
>site_10
TAATGACGATA
>site_11
CGATAACAATA
>site_12
CAATAACAACG
>site_13
CGATGACAATA
>site_14
CGATGACAATA
>site_15
AGATGAAAAGC
>site_16
TCATGACCACT
>site_17
TCATGACAGTG
>site_18
CCTTGACAACA
>site_19
GAATGTCAAAT
>site_20
GGATGCCAAGG
>site_21
CGAGGACAAGC
>site_22
GAATGTCAAAG
>site_23
GAATGAAAAAA
>site_24
AAATGCCAAGA
>site_25
AGTTGACAACC
>site_26
GTAGGACAAAA
>site_27
ATATGACATTG
>site_28
CGATGACAGTC
>site_29
GTCTGACAAGG
>site_30
CTCTGACAACC
>site_31
AAATGAAAAGA
>site_32
TCATGACAGCG
>site_33
AATTGACAAAA
>site_34
CGCTGACAATT
>site_35
GGATGACTAGC
>site_36
GTTTGACAAAC
>site_37
GCAGGACAAAG
>site_38
GACTGACAAAC
>site_39
TCAGGACAAAT
>site_40
CAATGACCACG
>site_41
CAGTGACAACG
>site_42
CCATTACAAAG
>site_43
AGACGACAAAA
>site_44
TAATGACAATT
>site_45
TGAAGACAACA
>site_46
CAATGACAAAG
>site_47
ACATGACAGGA
>site_48
TTATGCCAAAC
>site_49
GCATGAGAAAT
>site_50
AAATGCCAAGT
>site_51
CGCTGACAACG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_6nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_6nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m3_rc.png
;
a	14	17	6	6	1	3	45	3	43	33	16	15
c	14	9	14	1	1	0	0	34	1	6	10	3
g	8	9	19	3	1	4	0	3	1	2	8	15
t	9	10	6	35	42	38	0	5	0	4	11	12
//
; Sites	45
>site_0
GAGTTTACACAC
>site_1
GAGTTTACATGT
>site_2
CACTTTACAAGG
>site_3
AGCATTACAAAG
>site_4
ATGGTTATAACT
>site_5
CAGTTTACACAG
>site_6
AATCTTACAAAA
>site_7
CTGTTTACACAG
>site_8
ATGTTAACAAAG
>site_9
CAGTTTAAAAAA
>site_10
AGGTTTAAAACA
>site_11
CATTTTACACTT
>site_12
CGCTTTACAAAA
>site_13
TACTTTACAACT
>site_14
CAATGTACAAAT
>site_15
ACGATAACAATA
>site_16
ACGATGACAATA
>site_17
ACGATGACAATA
>site_18
ATATTTAGAACG
>site_19
CGGATTACATAA
>site_20
AAGGTTACAATA
>site_21
ACCTTGACAACA
>site_22
TTGTTTACATTT
>site_23
GCATTTAGAATT
>site_24
GTATTTAAAAGA
>site_25
CAGTTGACAACC
>site_26
AGTTTTATAAAG
>site_27
TACTTTATAAAA
>site_28
CGCTCTACAAAT
>site_29
ATGTTTACAGTG
>site_30
TCTGTTACAAGG
>site_31
GCCTTTACAGTG
>site_32
TACTTTACAAAG
>site_33
CAGTTTACACCA
>site_34
TATTTTACCAAA
>site_35
GGCTTTACACGG
>site_36
ATATTTACGACT
>site_37
GGATTTATAATG
>site_38
CTCTTTATAAGT
>site_39
GAGTTTACATCT
>site_40
TCCTATACAACC
>site_41
TCCATTACAAAG
>site_42
TGCTTTACAAGA
>site_43
CATTTAACAATT
>site_44
CTGTTTAGAAGG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_6nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_6nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m4_rc.png
;
a	10	8	5	25	26	25	29	3	0	3	20	2	7	5
c	2	11	16	3	0	4	1	28	1	2	2	2	8	8
g	9	4	4	2	2	1	1	0	0	3	6	21	6	7
t	10	8	6	1	3	1	0	0	30	23	3	6	10	11
//
; Sites	31
>site_0
TACAAAACTACGTG
>site_1
ACCCACACTTAGTC
>site_2
TACAAAGCTAAGTT
>site_3
CACCTAACTTAGCT
>site_4
ACTAAAACTTACTA
>site_5
GTAAAAAATTATTT
>site_6
TCCATAACTTATGC
>site_7
TTGAAGACTTAGGT
>site_8
TGCAAAACTTGATT
>site_9
GGAGAAACTTAGGA
>site_10
GAGAAAAATTATAC
>site_11
ACTAAAACTTCTAC
>site_12
GCAAAAACTTGGCG
>site_13
ACGAAAACTCAGTG
>site_14
TTTGAAACTTAGCG
>site_15
GCCAGAACTGAGAA
>site_16
TATAAAACTTGGGG
>site_17
AGAAAAACTTATTA
>site_18
TACAAAACCGAGGC
>site_19
AACAAAACTAGGCA
>site_20
GTCAAACCTTGGTT
>site_21
GCACAAACTTAACG
>site_22
ATTAATAATTAGGT
>site_23
ACTAAAACTTTCAC
>site_24
AGCAAAACTTTGTT
>site_25
GTGATAACTTAGCT
>site_26
TCCAACACTCAGCG
>site_27
GTCAACACTTGGCC
>site_28
ATCAACACTGAGAC
>site_29
TACTGAACTTAGAT
>site_30
CCCAAAACTTTTAT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_6nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_6nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2026-01-05.150950
; Job done	2026-01-05.150952
; Seconds	0.17
;	user	0.17
;	system	0.05
;	cuser	1.34
;	csystem	0.21
