; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	26	27	12	6	73	70	71	73	72	76	72	22	27
c	17	18	9	3	2	10	5	5	3	2	4	24	28
g	16	14	9	8	3	4	3	3	6	6	4	16	13
t	27	27	56	69	8	2	7	5	5	2	6	24	18
//
; Sites	86
>site_0
GAGTAAAAACAAA
>site_1
AGTAAAAACAAAC
>site_2
ATTTTAAAAAACT
>site_3
TTTTAAAAAACTG
>site_4
ACTTCATAAAATG
>site_5
CGTTAAGAAGAGC
>site_6
TCTGTAAAAAATT
>site_7
CTGTAAAAAATTA
>site_8
TCTTACAAAAGTG
>site_9
TCCTAAAATAAGG
>site_10
TGTTAACAAAGCT
>site_11
TTTTAAAAAAATG
>site_12
CTTTTAAAAAAAT
>site_13
AGTTTAAAAAACC
>site_14
GTTTAAAAAACCC
>site_15
CTTTACAAAACTA
>site_16
TCCTAACAAAAAT
>site_17
CCTAACAAAAATA
>site_18
CCCTAAAAAAACA
>site_19
AAGTAAATAAATA
>site_20
GCGGAAAAAAATT
>site_21
GAATAAAAAGACC
>site_22
GCACAAAAAAACC
>site_23
AGCTAAAAAATCC
>site_24
GACTCAAAAAAAC
>site_25
ACTCAAAAAAACC
>site_26
TCTTACAAAAAGA
>site_27
TATTAAAAGAAAA
>site_28
ATGTAAACAAATT
>site_29
TATTTAAAAGAGT
>site_30
GATTAAAACAACA
>site_31
AATGAAAAAATAC
>site_32
GAATGAAAAAATA
>site_33
CTTTAACAAAAGA
>site_34
ACTTTATAAAACT
>site_35
GATTAGAAAAACG
>site_36
CGTTGAAAAGAAT
>site_37
GTTGAAAAGAATA
>site_38
ATTAAAAAAAAAA
>site_39
AATTAAAAAAAAA
>site_40
GGGTAAACAAAGT
>site_41
TCTTACAAAACCG
>site_42
TGTTAACCAAAGC
>site_43
ATCTAAAAAAGAC
>site_44
ATTGACAAAAATT
>site_45
CTTTAAAGAAAAA
>site_46
TAATAATAAAACT
>site_47
GTTTAATAATAAA
>site_48
CATTAAAATATTG
>site_49
ATTAAAAAAAAAA
>site_50
AATTAAAAAAAAA
>site_51
TGGTAAGAAAATA
>site_52
TCTTACCAAAATC
>site_53
CCTTAGACAAACA
>site_54
TATCAAAAGAAGT
>site_55
TGGAAAAAAAATC
>site_56
ATGGAAAAAAAAT
>site_57
TGCTACAAAAAGC
>site_58
ATTTAAGAATAGG
>site_59
CCTTACAAAATCA
>site_60
ACTTATAAAGAGT
>site_61
AAATAAATAAACC
>site_62
AAATAAATAAATA
>site_63
TTTTAAAAAATGG
>site_64
CTTTTAAAAAATG
>site_65
GAATAGAAAAAGC
>site_66
CATTACAAAGAGC
>site_67
TTTTATTAAAATG
>site_68
ATTTTAATAAAAC
>site_69
TTTTAATAAAACA
>site_70
TAATAAAACAAAC
>site_71
AATAAAACAAACA
>site_72
CATTAGAGAAACC
>site_73
AAATAATAAAATA
>site_74
TAATAAAATAATT
>site_75
AAATAAAAACAGC
>site_76
TCCTAAAAAAAGC
>site_77
GTTTAAAGAAAAC
>site_78
TGTTAAATGAATC
>site_79
GGTTAAAATAGCG
>site_80
TTTGAAAATAAAC
>site_81
TTTGAAAAAAAAA
>site_82
CTTTGAAAAAAAA
>site_83
AGTTAAAAGAACC
>site_84
CACTAAAAAAACT
>site_85
GAATAAAAGAACC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m1_rc.png
;
a	16	10	51	1	54	1	0	43	2	17	17
c	13	16	2	3	1	48	52	4	4	18	17
g	15	20	1	51	0	4	2	2	49	15	12
t	12	10	2	1	1	3	2	7	1	6	10
//
; Sites	56
>site_0
AGAGACGAGGC
>site_1
CCAGACGAGAA
>site_2
GTAGACCTGAG
>site_3
ACAGACCTGAC
>site_4
ACAGCCCAGAC
>site_5
TGACACCAGCC
>site_6
ATAGACCCGCC
>site_7
GTAGATCAGGG
>site_8
AACGACCAGAG
>site_9
ATTGACCAGGT
>site_10
CTAGACCACTT
>site_11
AGAGACCAGGC
>site_12
TCAGAACAGCA
>site_13
TGAGACCCGCA
>site_14
GCAGATCAGAC
>site_15
ACACACCAGCG
>site_16
CGAGACCCGGA
>site_17
CGAGACCTGCC
>site_18
GGAGACCGGGA
>site_19
TAAAACCAGTG
>site_20
TGAGACCCGGC
>site_21
CCACACCAGCT
>site_22
ACAGACTAGGA
>site_23
TTAGACCTGGA
>site_24
TTAGACCACTG
>site_25
TGTGACCAGCC
>site_26
CCAGACCAGGA
>site_27
CGAGACCAGAA
>site_28
CGAGACCAGCG
>site_29
GAAGATCAGAC
>site_30
TCAGACCAGCT
>site_31
ATAGAGCAGTT
>site_32
GGAGACCAACA
>site_33
TTAGAGCAGCG
>site_34
GCAGACCGGAT
>site_35
GACGACCAGGG
>site_36
AGAGACCAGCG
>site_37
GGAGACCACCT
>site_38
CAAGACCTGAT
>site_39
GAAGACCTGAC
>site_40
CCAGTCCAGAC
>site_41
ACAGAGCAGCC
>site_42
GCAGACCACAA
>site_43
AAAGAGCAGTA
>site_44
GGAGACCAGAA
>site_45
GGAGACTAGGT
>site_46
AGAGACCATCT
>site_47
TAAGACCAATA
>site_48
CGAGACCAGGC
>site_49
CCAGACCAGCG
>site_50
ACAGACCTGGC
>site_51
AGAGACCAGAA
>site_52
TTATACCAGGA
>site_53
GAAGACCAGAC
>site_54
GAAGACCAGCA
>site_55
CGGGACCAGAG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m2_rc.png
;
a	21	17	77	77	76	5	5	2	75	23	20
c	17	25	2	6	3	72	5	72	1	28	27
g	27	26	3	2	3	6	3	4	6	24	15
t	20	17	3	0	3	2	72	7	3	10	23
//
; Sites	85
>site_0
CGAAACTGAAA
>site_1
GGAACCTCATC
>site_2
GTAAACTCACA
>site_3
GTAAACTCACA
>site_4
ATAAACTCCCC
>site_5
ACAGACTCAGG
>site_6
CGGAACTCAAC
>site_7
TGGAACTCACC
>site_8
GAAAACGCAGA
>site_9
ACAAACACACT
>site_10
GAAAACGCAAA
>site_11
AGAAACTCACC
>site_12
TAAAACTTACT
>site_13
GGAGACTCACG
>site_14
AGAAAGTCACC
>site_15
GGAAACCCACA
>site_16
CCAAAGTCAGA
>site_17
TCAAACACAGG
>site_18
CCAATCTCAAG
>site_19
CCAAAGTCACA
>site_20
TCAAACTCAGA
>site_21
AGAAACTTAGG
>site_22
GAAAACTCAAT
>site_23
ATAAATTCAAC
>site_24
ACAAACTCGCG
>site_25
GGTAACTCAAC
>site_26
CAAAACACACC
>site_27
TGAAACCCACT
>site_28
TCAAACTCTCC
>site_29
ACACACTCACT
>site_30
AAAAATTCAAC
>site_31
GAAAACTCAGT
>site_32
GCAAACTCGGG
>site_33
ACAAACCCACT
>site_34
GGAAGCTCATT
>site_35
TAAAAATCAGA
>site_36
TGAAACTTAGC
>site_37
TCAAAGTCATC
>site_38
TTCAACTCACC
>site_39
GGAAGCTCACG
>site_40
GGAAACTCACG
>site_41
GAAAACACACC
>site_42
AAAAACTTATT
>site_43
TCAAAGTCAAG
>site_44
GAAAACTCAAC
>site_45
TGAAACTTAAG
>site_46
ACAAACTTAAC
>site_47
GTAAACACAAT
>site_48
GTAAACTGAGC
>site_49
TAAAGCTCAGT
>site_50
GCAAACTCGGC
>site_51
GGAAACCCAGC
>site_52
AGAAACTCTAG
>site_53
CAACACTCAGC
>site_54
TCAAACTCAGT
>site_55
CTACACTCATA
>site_56
CTAAAATCAAT
>site_57
ACAAAATCAGA
>site_58
TTAAACCCAGC
>site_59
CTAATCTCAGT
>site_60
CTACACTCAAT
>site_61
GGAAAATCACT
>site_62
GTAAACTCATA
>site_63
GTAAACTAAAT
>site_64
AAAACCTCAGT
>site_65
CCACACTCACC
>site_66
GGAAACTTAAA
>site_67
GGAAACTCGGC
>site_68
TGAAACTGATG
>site_69
CCAAACTGATT
>site_70
ACAATCTCATT
>site_71
CGAAACGCAGA
>site_72
CGCAACTCAAA
>site_73
ATAAAGTCAAC
>site_74
TGAAACTCACA
>site_75
AAAAAATCAAT
>site_76
TCTAACTCACA
>site_77
GCACACTCACC
>site_78
AAAAACTCGAA
>site_79
CCAAACTCTGG
>site_80
CGGAACTCACT
>site_81
TCAAACTAAAG
>site_82
TTAACCTCACT
>site_83
AAAAACTCGGA
>site_84
GTTAACTCATC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m3_rc.png
;
a	5	5	6	4	0	1	1	26	28	23	3	10	10
c	9	9	11	21	29	1	0	0	1	2	1	6	6
g	12	7	4	2	0	2	28	2	0	2	4	7	7
t	3	8	8	2	0	25	0	1	0	2	21	6	6
//
; Sites	29
>site_0
CAGCCTGAAATGT
>site_1
GACACTGAAAGGA
>site_2
CAATCTGAAATAA
>site_3
GGTCCTAAAATAA
>site_4
GAGTCTGAAATGC
>site_5
ATGCCTGAAAGTA
>site_6
GGTCCTGTAATTT
>site_7
GTACCTGAAAACT
>site_8
GCCCCTGGAATGG
>site_9
CTCGCTGAAATCC
>site_10
CATCCTGAAAAAT
>site_11
CGTCCTGAAAGTG
>site_12
GCCGCTGACATCG
>site_13
CCCACCGAAATAC
>site_14
AGACCTGAAGTCA
>site_15
CCCCCTGAAAACC
>site_16
CTTCCTGAAACTG
>site_17
TCCCCTGAACTTC
>site_18
GCCCCTGAACTTG
>site_19
ACTCCAGAAATAA
>site_20
TCCCCGGAAATAA
>site_21
GGACCTGAAAGGT
>site_22
GTACCTGAATTGA
>site_23
CTGCCTGGAATAA
>site_24
ATCACTGAAGTAT
>site_25
GTCCCGGAAATAA
>site_26
TCTCCTGAAATGG
>site_27
GGTCCTGAATTAG
>site_28
AGAACTGAAATCC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m4_rc.png
;
a	15	4	1	50	1	1	1	4	2	12	10
c	19	18	6	2	53	5	2	0	47	13	23
g	16	19	49	3	2	2	52	47	5	20	16
t	6	15	0	1	0	48	1	5	2	11	7
//
; Sites	56
>site_0
ATGGCTGGCGA
>site_1
ATGACTCGCCA
>site_2
CTGACTGGCGC
>site_3
ACGGCTGGCGT
>site_4
CCGACGGGCCG
>site_5
GTGACTGGGGA
>site_6
AGGACTGGTGG
>site_7
TAGACTGGAGC
>site_8
ATGACTGGCCA
>site_9
TGGACTGGCAG
>site_10
CTGACTGACTC
>site_11
GGAACTGGCGG
>site_12
CGGACTGGGGC
>site_13
GGGACTGGGAT
>site_14
GCGACTGGCCC
>site_15
AGGACTGGCTC
>site_16
CAGACTGTCGA
>site_17
TTCACTGGCAT
>site_18
CCGACCGGCCC
>site_19
CCGGCTGGCGC
>site_20
GCGACTGGGCC
>site_21
GGGACGGGCGC
>site_22
CGGACTTGCTG
>site_23
GTGACTGACTC
>site_24
GCGCCTGGCAC
>site_25
GTGAGTGGCCG
>site_26
TGGACTGGCTG
>site_27
CAGACTGGATT
>site_28
ACCACTGGCCC
>site_29
GCGACTGTCTG
>site_30
CCGACTGGTGC
>site_31
GGGACTGGCAG
>site_32
CGGACCGGCCG
>site_33
GTGACTGTCTC
>site_34
CCCACTGGCGC
>site_35
AGGACTGTCGG
>site_36
GCGAGTGGCGT
>site_37
AGGACTGTCAT
>site_38
AAGACTCGCAC
>site_39
CGGTCTGGCAC
>site_40
GCGACTGGGGG
>site_41
CCCACTGGCAC
>site_42
ATGACTAGCCC
>site_43
CCGCCTGGCGC
>site_44
GTGACTGGCTC
>site_45
CTGACAGGCGA
>site_46
CCGACTGACAG
>site_47
AGGACTGACAA
>site_48
TGGACTGGCAG
>site_49
ATCACTGGCTA
>site_50
CGGACCGGCGT
>site_51
AGGACCGGCCG
>site_52
GGGACTGGCCA
>site_53
CCGACCGGCGC
>site_54
TTGAATGGCCG
>site_55
ACCACTGGCTA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150933_2026-01-05.150933_rtRXPK/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2026-01-05.150956
; Job done	2026-01-05.150957
; Seconds	0.13
;	user	0.13
;	system	0.06
;	cuser	1.22
;	csystem	0.18
