; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	20	11	6	4	2	49	54	53	53	49	22	13
c	8	15	40	0	3	0	0	3	1	1	8	12
g	10	12	2	1	5	1	2	0	1	2	14	13
t	18	18	8	51	46	6	0	0	1	4	12	18
//
; Sites	56
>site_0
ATCTCAAAAAAT
>site_1
TCCTTTAAAATT
>site_2
AACTTAGAAAAT
>site_3
CTCTTAAAAAGG
>site_4
CAATTAAAAAGA
>site_5
CCATTAAAAAAA
>site_6
TACTTTAAAAAG
>site_7
ACTTTAAAAAGC
>site_8
TGCATAAAAACC
>site_9
TACTTAAAACAT
>site_10
AATTTAAAAAAG
>site_11
CACTTAACAATT
>site_12
ACCTTAAAATAT
>site_13
AGCTTGAAAAGC
>site_14
TCCTTAAAAAAT
>site_15
TCCTTTAAAATC
>site_16
ATCTTAAAAACT
>site_17
TATTTAAAAAGG
>site_18
AACTTAAATACA
>site_19
TCCTTAAAGACT
>site_20
TGATTAAAAAGT
>site_21
TTCTTAAAATAG
>site_22
TTCTTAAAAAGA
>site_23
GTTTTAAAAACA
>site_24
ATTTTAAAAAGC
>site_25
AGCTCAAAAAAT
>site_26
CTCTGAAAAAGA
>site_27
TGCTAAAAAATA
>site_28
AGCTTAAAATGT
>site_29
ACCTTTAAAATT
>site_30
GTCATAAAAAGT
>site_31
TTCTTTAAAATC
>site_32
TTCGTAAACACG
>site_33
AGATTAAAAATG
>site_34
GGATTAAAAAAA
>site_35
TCCATAAAAATC
>site_36
AGCTTAAAAGGC
>site_37
AGATTAAAAATG
>site_38
ATCTCAAAAAAG
>site_39
AGCTTTAAAAAG
>site_40
GCTTTAAAAAGG
>site_41
AACTTAAAAGGA
>site_42
ATCTTAGAAATC
>site_43
ATCTTAAAATAT
>site_44
TCCTTAACAAAC
>site_45
TGCTGAAAAAAA
>site_46
GCCATAAAAATG
>site_47
CCCTTAACAACC
>site_48
GAGTTAAAAAAA
>site_49
CTTTTAAAAAAT
>site_50
GTCTAAAAAAAA
>site_51
GCCTGAAAAATG
>site_52
GTCTGAAAAAAA
>site_53
CTTTTAAAAAAT
>site_54
GCGTTAAAAAAT
>site_55
TACTGAAAAACC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m1_rc.png
;
a	13	15	5	46	3	2	37	48	50	4	14	14
c	13	4	6	2	0	0	5	0	0	2	16	16
g	9	13	37	1	1	1	7	1	0	3	6	6
t	15	18	2	1	46	47	1	1	0	41	14	14
//
; Sites	50
>site_0
TGGGTTAAATTA
>site_1
CAAATTAAATTT
>site_2
ATGAATAAATGT
>site_3
AGAATTAAATTA
>site_4
GTCATTAAATTC
>site_5
ATGATTTAATAA
>site_6
CTTATTAAATCA
>site_7
CTGATTAAAGAA
>site_8
GAGAGTAAATAC
>site_9
TGAATTAAATAA
>site_10
ATGATTAAAGCT
>site_11
TAGAATAAATCA
>site_12
CTGATTCAATCT
>site_13
TAGATTGAATCA
>site_14
GGGATTGAATGG
>site_15
TCGATAATATTC
>site_16
CGGATTCAATCT
>site_17
TAGATTGAATCC
>site_18
TCCATTAAATTC
>site_19
CGGATTCAATCT
>site_20
TAGATTGAATCC
>site_21
CGGATTCAATCT
>site_22
TAGATTGAATCC
>site_23
CGGATTCAATCA
>site_24
TTGATTGAATCC
>site_25
TCCATTAAATTC
>site_26
TTGATTAAAAAG
>site_27
ACCATTAAATGA
>site_28
AAGATTAGATCC
>site_29
CAAATTAAATAC
>site_30
AGCATTAAATTA
>site_31
TTGAATAAATAG
>site_32
CTGTTTAAATCT
>site_33
ATCATTAAATAC
>site_34
GTGATTAAATAC
>site_35
AAGATTAAACTG
>site_36
GGGCTTAAATTA
>site_37
GAGATTAAAAAT
>site_38
TGGATTAAAAAA
>site_39
CAGATTGAATGT
>site_40
ATGATTAAATTT
>site_41
GAGATTAAAAAT
>site_42
TGGATTAAATGC
>site_43
GAGATAAAATGT
>site_44
CTGATTAAAGAG
>site_45
CTGATGAAATTG
>site_46
ATTATTAAATTT
>site_47
GTGATTAAACAC
>site_48
AGGCTTAAATCC
>site_49
AAAATTAAATTA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m2_rc.png
;
a	11	7	13	18	0	0	22	2	0	20	4	5	4
c	2	4	2	1	0	23	0	1	22	1	4	2	5
g	7	8	4	3	23	0	0	18	1	2	2	6	5
t	3	4	4	1	0	0	1	2	0	0	13	10	9
//
; Sites	23
>site_0
TGTAGCAGCAGTT
>site_1
AATAGCAGCAATT
>site_2
GGGAGCAGCACAC
>site_3
GCAAGCATCACGT
>site_4
AAAAGCAGCGAGG
>site_5
GGAGGCAGCATTG
>site_6
CCAAGCAGGATGA
>site_7
AATAGCAGCACTT
>site_8
AATAGCAGCAAAC
>site_9
ACAAGCACCATCT
>site_10
GTAAGCATCACAC
>site_11
ATAAGCAGCATTA
>site_12
GGAGGCAGCGTTA
>site_13
AAACGCAACATTT
>site_14
AAGAGCAGCAGAT
>site_15
GTAAGCAGCCTAA
>site_16
AGAAGCAGCATTC
>site_17
AAGAGCAGCAATT
>site_18
GGAAGCTGCATGG
>site_19
TTAAGCAACATGT
>site_20
CGGGGCAGCATGG
>site_21
AGCTGCAGCATCG
>site_22
TCCAGCAGCATTC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m3_rc.png
;
a	18	14	48	2	4	46	0	5	50	13	19
c	8	17	0	51	47	3	1	2	1	15	19
g	7	10	2	0	0	4	52	43	2	16	11
t	21	13	4	1	3	1	1	4	1	10	5
//
; Sites	54
>site_0
TTACCTGGAAA
>site_1
CTACCAGGTGA
>site_2
ACACCAGGACA
>site_3
GGACCCGGAGC
>site_4
TATCCAGGAGA
>site_5
CAACTAGGACC
>site_6
AGACCGGGAGC
>site_7
TAAACAGGACC
>site_8
TGACCAGGAAG
>site_9
TTACCAGAAGC
>site_10
TCACCAGGGCG
>site_11
TGACCGGGAGG
>site_12
GTACCAGGGTG
>site_13
CTACCAGGACC
>site_14
TCACAAGGATA
>site_15
AAACCACGACT
>site_16
ATACCAGCACC
>site_17
GCACCAGGATA
>site_18
TGACCAGTAGG
>site_19
TCACCATGACA
>site_20
CCACCAGGCGG
>site_21
ACACCGGGACC
>site_22
AAACCGGGAGA
>site_23
GGACCAGTACT
>site_24
CGACCAGAAAT
>site_25
TCACCCGGAAA
>site_26
TAGCCAGGATG
>site_27
TCACCAGGAGG
>site_28
AAACCAGTACA
>site_29
TTACCCGGATG
>site_30
AAACCAGAATA
>site_31
ATACCAGGAAG
>site_32
TTACCAGGAAA
>site_33
GAATCAGGAAC
>site_34
CTTCCAGGATA
>site_35
TTACAAGGAAA
>site_36
CTACTAGGAGC
>site_37
GGACTAGGAAA
>site_38
TAAACAGGAGC
>site_39
TCACCAGGACT
>site_40
AAACCAGGAGC
>site_41
GCACCAGGAAA
>site_42
ACACAAGGATC
>site_43
ACACAAGGAGT
>site_44
CCGCCAGGACC
>site_45
ATACCAGCAGG
>site_46
ACTCCAGGAAC
>site_47
AGACCAGTAAC
>site_48
AAACCAGGAGA
>site_49
TAACCAGGACC
>site_50
TAACCAGAAAA
>site_51
ACACCAGAACA
>site_52
ACACCAGGATC
>site_53
TGTCCAGGATC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m4_rc.png
;
a	8	13	4	3	6	27	26	29	28	2	29	3	10
c	1	4	22	0	1	0	2	0	0	2	0	10	6
g	6	5	2	6	2	0	1	0	0	1	1	2	9
t	15	8	2	21	21	3	1	1	2	25	0	15	5
//
; Sites	30
>site_0
TACTAAAAATACA
>site_1
TATGTAAAATATG
>site_2
TACGTACATTACG
>site_3
CACTGATAATATA
>site_4
TACTTAAAACATC
>site_5
ACCTTAAAATATT
>site_6
TACATAAAATATA
>site_7
TCCTTAAAAAATC
>site_8
AACGTAATATAAT
>site_9
TACATAAAATAGG
>site_10
TTCTTAGAATACC
>site_11
TTCTTAAAATAGC
>site_12
TGCGTAAAACAAA
>site_13
TACTAAAAATACA
>site_14
TGATAAAAATACG
>site_15
AGCTTAAAATGTG
>site_16
ATCTGAAAATACC
>site_17
GGCTTAAATTACC
>site_18
GGCGTAAAAGATT
>site_19
ATCTCAAAATACA
>site_20
ATCTTAAAATATT
>site_21
TAGTTACAATATT
>site_22
ATATTTAAATACA
>site_23
GTATTTAAATATG
>site_24
GTAATAAAATATG
>site_25
GCCTATAAATATA
>site_26
AATGTAAAATATA
>site_27
TACTAAAAATACA
>site_28
GCGTTAAAAAATG
>site_29
TACTAAAAATAAG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2026-01-05.151011
; Job done	2026-01-05.151013
; Seconds	0.13
;	user	0.13
;	system	0.04
;	cuser	1.22
;	csystem	0.16
