; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	7	13	7	21	22	8	0	34	38	1	2	38	14	17
c	6	2	7	8	2	2	1	4	0	0	4	1	8	9
g	10	13	9	6	10	24	1	2	1	37	33	0	8	7
t	17	12	17	5	6	6	38	0	1	2	1	1	10	7
//
; Sites	40
>site_0
TTGCATTAAGGAAG
>site_1
TGTACGTAAGAACT
>site_2
GGCAGATAAGGATG
>site_3
GGTAGGGAAGGACC
>site_4
TAACTATAAGGAAT
>site_5
TTGTAGTAAGTAAG
>site_6
AGTAAGTAAGCATA
>site_7
TGCAGGTAAGGAAA
>site_8
TAGTAGTAAGGATT
>site_9
TGTAGGTAAAGAAA
>site_10
GAGGAGTAAGGAGC
>site_11
CATGAGTCAGGAAA
>site_12
TTTAGGCAAGGATA
>site_13
TTTATGTAATGAGG
>site_14
AGTCTTTAAGGACC
>site_15
TGAAAGTAAGGTGC
>site_16
GGCGTTTAAGGAAT
>site_17
GTGTAGTAAGCACA
>site_18
CTAGAGTAAGGCTA
>site_19
GTGAAGTAAGCATC
>site_20
CAGAAGTAAGCAAG
>site_21
ATTCAGTGAGGACA
>site_22
TAAAGTTAAGGATC
>site_23
ACTAATTCAGGATA
>site_24
CAAAAGTAGGGAAA
>site_25
TAGCAATAAGGAAC
>site_26
AATCTCTAAGGACC
>site_27
TACAAGTAAGGATA
>site_28
TCTATCTAAGGAGA
>site_29
GGACAATAAGGACA
>site_30
TTTGCGTATGGAGG
>site_31
TATAAATGAGGAGT
>site_32
GTTTGTTAAGGAAA
>site_33
AACAGATAAGGAAA
>site_34
CATGAGTCAGGAAC
>site_35
GGTTAATAATGATA
>site_36
CTAAAGTCAGGAGT
>site_37
AGCCGGTAAGGACT
>site_38
GTGAGATAAGGAGA
>site_39
TGCAAGTAAGAAAG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_6nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_6nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m1_rc.png
;
a	2	5	2	0	6	8	1	3	9	8	11	9	0	3	9	2	4	3
c	4	4	8	0	2	1	2	0	0	2	0	0	1	0	1	0	2	1
g	1	0	1	0	2	2	0	1	1	1	0	0	0	2	0	6	3	2
t	4	2	0	11	1	0	8	7	1	0	0	2	10	6	1	3	2	5
//
; Sites	11
>site_0
CACTAATTACATTTATTG
>site_1
TCCTAGCTAAAATATGGT
>site_2
TACTCGCTAAAATGAGAA
>site_3
CCCTGATAAAAATACGAA
>site_4
ATCTAATTGAAATGAGTG
>site_5
CACTCATTTCAATTAGAT
>site_6
GCGTAAAGAAAATTAAGC
>site_7
ACATAATTAGAACTATCT
>site_8
CTCTACTAAAAATAAGCT
>site_9
TAATTATTAAATTTAAGA
>site_10
TACTGATAAAAATTATAT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_6nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_6nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m2_rc.png
;
a	6	7	2	0	2	0	1	28	9	9
c	4	11	27	4	1	0	0	2	5	4
g	5	7	1	4	27	30	0	0	6	6
t	15	5	0	22	0	0	29	0	10	11
//
; Sites	30
>site_0
AACTCGTATT
>site_1
GCGTGGTAGT
>site_2
GCCTGGTAGG
>site_3
ACCTGGTAGA
>site_4
TTATGGTATA
>site_5
TTCTGGTAAT
>site_6
TGCCGGTAAC
>site_7
CCCTGGTACT
>site_8
TCCTGGTAGG
>site_9
TGCTGGTATG
>site_10
ATATGGTAAT
>site_11
GACTGGAACG
>site_12
TTCTGGTCGC
>site_13
GGCTGGTATT
>site_14
CCCGGGTACA
>site_15
TCCGGGTAAT
>site_16
TTCGGGTAAA
>site_17
AACTGGTATT
>site_18
CCCGGGTATC
>site_19
TCCTGGTATT
>site_20
TCCTGGTAAA
>site_21
TCCCGGTATT
>site_22
AACTGGTAGA
>site_23
TACTAGTAAC
>site_24
TACTAGTAAT
>site_25
GACTGGTACA
>site_26
TGCCGGTACA
>site_27
TGCTGGTATG
>site_28
AGCCGGTAAG
>site_29
CGCTGGTCTA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_6nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_6nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m3_rc.png
;
a	10	13	20	3	25	3	0	1	1	26	5	18	6	7
c	5	4	1	3	0	0	28	25	3	0	3	2	9	3
g	4	5	2	6	2	24	1	1	1	1	19	5	6	8
t	10	7	6	17	2	2	0	2	24	2	2	4	8	11
//
; Sites	29
>site_0
TGATTGCCTAGTTG
>site_1
CAACAGCCGACATA
>site_2
AAATAGCCCAAATG
>site_3
GAAGAGCCTGGAGA
>site_4
AGTTAGCCTATGCT
>site_5
TAATATGCTAGAGA
>site_6
TGTTAGCCTAAGAT
>site_7
TCCTAGCCTAGCCT
>site_8
CAAAATCCTAGAGG
>site_9
AAATGGCCTAAATG
>site_10
TTAGAGCCTACAGA
>site_11
TATGAGCCTACACT
>site_12
GCATAACCTAGGCT
>site_13
GGAAAGCCTAGGTT
>site_14
TATTAGCATAGAAT
>site_15
GAGTGGCCTAGACT
>site_16
CTTTAACCTAGAAG
>site_17
AGATAGCTTAAAAG
>site_18
TTATAACCTAGTCC
>site_19
ATGTAGCCTAGTTC
>site_20
AAATAGCCTTTAGC
>site_21
CAATAGCTTAGGAT
>site_22
AAATTGCCTAAACA
>site_23
AATCAGCCTAGTGG
>site_24
ACAGAGCGTAGCCT
>site_25
ACACAGCCCAGACA
>site_26
TTAAAGCCAAGATT
>site_27
TTAGAGCCTTGAAG
>site_28
CTAGAGCCCAGATA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_6nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_6nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m4_rc.png
;
a	63	55	2	2	74	78	1	1	0	21	53
c	7	10	4	76	5	1	79	78	79	6	9
g	7	2	17	1	0	1	0	0	1	48	14
t	3	13	57	1	1	0	0	1	0	5	4
//
; Sites	80
>site_0
GTGAAACCCCG
>site_1
CCACAACCCTA
>site_2
CTGCTACCCAT
>site_3
CAGCAACCGAA
>site_4
AAACAACCCAA
>site_5
ACGCACCCCGG
>site_6
ACGCAAACCGA
>site_7
GTGCCACCCAC
>site_8
ACGCAACTCAG
>site_9
ACGCCACCCTC
>site_10
AATCAACCCGA
>site_11
AATCAACCCGA
>site_12
AATCAACCCGA
>site_13
AATCAACCCGA
>site_14
AATCAACCCGA
>site_15
AATCAACCCCG
>site_16
AATCAACCCGA
>site_17
AATCAACCCGA
>site_18
AATCAACCCGA
>site_19
ATTCAACCCAG
>site_20
AATCAACCCGA
>site_21
AATCAACCCGA
>site_22
ATTCAACCCAG
>site_23
AATCAACCCGA
>site_24
AATCAACCCGA
>site_25
AATCAACCCGA
>site_26
AATCAACCCGA
>site_27
AATCAACCCAT
>site_28
AATCAACCCAA
>site_29
AATCAACCCGA
>site_30
AATCAACCCGA
>site_31
AATCAACCCGA
>site_32
AATCAACCCGA
>site_33
AATCAACCCGA
>site_34
AATCAACCCGA
>site_35
AATCAACCCGA
>site_36
AATCAACCCGA
>site_37
AATCAACCCGA
>site_38
AATCAACCCGA
>site_39
AATCAACCCGA
>site_40
AATCAACCCGA
>site_41
AATCAACCCGA
>site_42
AATCAACCCAA
>site_43
AATCAACCCGA
>site_44
AATCAACCCGA
>site_45
ATTCAACCCAG
>site_46
AATCAACCCGA
>site_47
AATCAACCCGA
>site_48
AATCAACCCAA
>site_49
AATCAACCCGA
>site_50
GATCAACCCGA
>site_51
ATTCAACCCAG
>site_52
AATCAACCCGA
>site_53
ATTCAACCCGA
>site_54
AATCAACCCGA
>site_55
AATCAACCCAA
>site_56
AATCAACCCGA
>site_57
AATCAACCCGA
>site_58
AATCAACCCGA
>site_59
AATCAACCCGA
>site_60
AATCAACCCAA
>site_61
AATCAACCCGA
>site_62
AATCAACCCAA
>site_63
AATCAACCCGA
>site_64
TCGCCACCCCC
>site_65
GTGAAACCCCG
>site_66
GCTCAACCCTC
>site_67
CTGCAACACAT
>site_68
ATGCAACCCGC
>site_69
TTGTAACCCTC
>site_70
CCTCAACCCAG
>site_71
ATCCAACCCGG
>site_72
TAGCCACCCAT
>site_73
AGGCAACCCAC
>site_74
ACCCAACCCCC
>site_75
CGTGAACCCGG
>site_76
CCGCAGCCCCA
>site_77
GAGCCACCCGC
>site_78
GACCAACCCAG
>site_79
AACCAACCCTG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_6nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/05/peak-motifs.2026-01-05.150947_2026-01-05.150947_WkkC55/results/oligos_6nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2026-01-05.151005
; Job done	2026-01-05.151007
; Seconds	0.19
;	user	0.19
;	system	0.04
;	cuser	1.34
;	csystem	0.22
