/var/www/html/rsat/public_html/tmp/www-data/2026/01/08/peak-motifs.2026-01-08.111926_2026-01-08.111926_ViZhty/results/composition/peak-motifs_ctrl_profiles-1str-ovlp_2nt_ci20.tab 
 position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2026/01/08/peak-motifs.2026-01-08.111926_2026-01-08.111926_ViZhty/data/sequences/peak-motifs_ctrl_maxlen1000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 2 -ci 20 -img_format png -title RAD21KOvsWT -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2026/01/08/peak-motifs.2026-01-08.111926_2026-01-08.111926_ViZhty/results/composition/peak-motifs_ctrl_profiles-1str-ovlp_2nt_ci20.tab
 Citation: van Helden, et al. (2000).  Nucleic Acids Res 28, 1000-1010.
 Sequence file                	$RSAT/public_html/tmp/www-data/2026/01/08/peak-motifs.2026-01-08.111926_2026-01-08.111926_ViZhty/data/sequences/peak-motifs_ctrl_maxlen1000_purged_ml40_mis3.fasta
 Sequence format              	fasta
 Sequence type                	dna
 Output file                  	$RSAT/public_html/tmp/www-data/2026/01/08/peak-motifs.2026-01-08.111926_2026-01-08.111926_ViZhty/results/composition/peak-motifs_ctrl_profiles-1str-ovlp_2nt_ci20.tab
 Oligo length                 	2
 Occurrences counted  on a single  strands
 Conditions of applicability checked.
 Background model estimation: homogeneous repartition
 Sequence statistics:
	Nb of sequences              	10003
	Sum of sequence lengths      	3425490
	Min sequence length          	0
	Max sequence length          	1000
	Average sequence length      	342
	Possible positions           	3415487
 Oligonucleotide statistics:
	Total occurrences    	3254738
 Position interval parameters:
	Position interval    	20
	Number of windows    	50
	Total positions      	3415487
	Degrees of freedom   	49
 K-mer clustering parameters:
	Number of clusters   	0
	Clustering method    	complete
 Position intervals:
	window	[min,max]	mid	seq	occ
	1	-25	[-499,-480]	-489.5	15	272
	2	-24	[-479,-460]	-469.5	20	367
	3	-23	[-459,-440]	-449.5	24	425
	4	-22	[-439,-420]	-429.5	30	529
	5	-21	[-419,-400]	-409.5	35	660
	6	-20	[-399,-380]	-389.5	49	855
	7	-19	[-379,-360]	-369.5	60	1094
	8	-18	[-359,-340]	-349.5	82	1450
	9	-17	[-339,-320]	-329.5	108	1940
	10	-16	[-319,-300]	-309.5	140	2418
	11	-15	[-299,-280]	-289.5	185	3214
	12	-14	[-279,-260]	-269.5	290	4752
	13	-13	[-259,-240]	-249.5	476	7442
	14	-12	[-239,-220]	-229.5	921	13560
	15	-11	[-219,-200]	-209.5	1893	28116
	16	-10	[-199,-180]	-189.5	3355	53248
	17	-9	[-179,-160]	-169.5	5368	88111
	18	-8	[-159,-140]	-149.5	7588	131075
	19	-7	[-139,-120]	-129.5	10003	177839
	20	-6	[-119,-100]	-109.5	10003	200060
	21	-5	[-99,-80]	-89.5	10003	200060
	22	-4	[-79,-60]	-69.5	10003	200060
	23	-3	[-59,-40]	-49.5	10003	200060
	24	-2	[-39,-20]	-29.5	10003	200060
	25	-1	[-19,0]	-9.5	10003	200060
	26	0	[1,20]	10.5	10003	200060
	27	1	[21,40]	30.5	10003	200060
	28	2	[41,60]	50.5	10003	200060
	29	3	[61,80]	70.5	10003	200060
	30	4	[81,100]	90.5	10003	200060
	31	5	[101,120]	110.5	10003	199956
	32	6	[121,140]	130.5	9843	173018
	33	7	[141,160]	150.5	7424	126655
	34	8	[161,180]	170.5	5195	84125
	35	9	[181,200]	190.5	3230	50374
	36	10	[201,220]	210.5	1814	26175
	37	11	[221,240]	230.5	866	12676
	38	12	[241,260]	250.5	451	7075
	39	13	[261,280]	270.5	278	4542
	40	14	[281,300]	290.5	180	3124
	41	15	[301,320]	310.5	137	2357
	42	16	[321,340]	330.5	107	1886
	43	17	[341,360]	350.5	82	1406
	44	18	[361,380]	370.5	58	1075
	45	19	[381,400]	390.5	49	827
	46	20	[401,420]	410.5	35	648
	47	21	[421,440]	430.5	29	517
	48	22	[441,460]	450.5	24	416
	49	23	[461,480]	470.5	19	358
	50	24	[481,500]	490.5	15	250

 Column headers
	1	seq            	pattern sequence
	2	id             	pattern identifier
	3	occ            	pattern occurrences
	4	chi2           	observed chi-square
	5	df             	degrees of freedom
	6	Pval           	P-value (probability for one word to be a false positive)
	7	Eval           	E-value; expected number of false positives (Eval = Pval * nb_tests)
	8	sig            	Significance (sig = -log10(Eval))
	9	rank           	rank of the pattern according to sorting criterion
	10	-489.5         	occurrences in window	1	[-499,-480]
	11	-469.5         	occurrences in window	2	[-479,-460]
	12	-449.5         	occurrences in window	3	[-459,-440]
	13	-429.5         	occurrences in window	4	[-439,-420]
	14	-409.5         	occurrences in window	5	[-419,-400]
	15	-389.5         	occurrences in window	6	[-399,-380]
	16	-369.5         	occurrences in window	7	[-379,-360]
	17	-349.5         	occurrences in window	8	[-359,-340]
	18	-329.5         	occurrences in window	9	[-339,-320]
	19	-309.5         	occurrences in window	10	[-319,-300]
	20	-289.5         	occurrences in window	11	[-299,-280]
	21	-269.5         	occurrences in window	12	[-279,-260]
	22	-249.5         	occurrences in window	13	[-259,-240]
	23	-229.5         	occurrences in window	14	[-239,-220]
	24	-209.5         	occurrences in window	15	[-219,-200]
	25	-189.5         	occurrences in window	16	[-199,-180]
	26	-169.5         	occurrences in window	17	[-179,-160]
	27	-149.5         	occurrences in window	18	[-159,-140]
	28	-129.5         	occurrences in window	19	[-139,-120]
	29	-109.5         	occurrences in window	20	[-119,-100]
	30	-89.5          	occurrences in window	21	[-99,-80]
	31	-69.5          	occurrences in window	22	[-79,-60]
	32	-49.5          	occurrences in window	23	[-59,-40]
	33	-29.5          	occurrences in window	24	[-39,-20]
	34	-9.5           	occurrences in window	25	[-19,0]
	35	10.5           	occurrences in window	26	[1,20]
	36	30.5           	occurrences in window	27	[21,40]
	37	50.5           	occurrences in window	28	[41,60]
	38	70.5           	occurrences in window	29	[61,80]
	39	90.5           	occurrences in window	30	[81,100]
	40	110.5          	occurrences in window	31	[101,120]
	41	130.5          	occurrences in window	32	[121,140]
	42	150.5          	occurrences in window	33	[141,160]
	43	170.5          	occurrences in window	34	[161,180]
	44	190.5          	occurrences in window	35	[181,200]
	45	210.5          	occurrences in window	36	[201,220]
	46	230.5          	occurrences in window	37	[221,240]
	47	250.5          	occurrences in window	38	[241,260]
	48	270.5          	occurrences in window	39	[261,280]
	49	290.5          	occurrences in window	40	[281,300]
	50	310.5          	occurrences in window	41	[301,320]
	51	330.5          	occurrences in window	42	[321,340]
	52	350.5          	occurrences in window	43	[341,360]
	53	370.5          	occurrences in window	44	[361,380]
	54	390.5          	occurrences in window	45	[381,400]
	55	410.5          	occurrences in window	46	[401,420]
	56	430.5          	occurrences in window	47	[421,440]
	57	450.5          	occurrences in window	48	[441,460]
	58	470.5          	occurrences in window	49	[461,480]
	59	490.5          	occurrences in window	50	[481,500]
seq id occ chi2 df Pval Eval sig rank -489.5 -469.5 -449.5 -429.5 -409.5 -389.5 -369.5 -349.5 -329.5 -309.5 -289.5 -269.5 -249.5 -229.5 -209.5 -189.5 -169.5 -149.5 -129.5 -109.5 -89.5 -69.5 -49.5 -29.5 -9.5 10.5 30.5 50.5 70.5 90.5 110.5 130.5 150.5 170.5 190.5 210.5 230.5 250.5 270.5 290.5 310.5 330.5 350.5 370.5 390.5 410.5 430.5 450.5 470.5 490.5
gc gc 237652 4880.8 49 0.0e+00 0 300 1 18 25 33 35 35 60 90 137 169 212 285 394 599 1019 1871 3511 5511 7896 10502 12045 12722 13486 14968 16472 17624 17443 16407 14842 13539 12589 11979 10267 7637 5224 3236 1849 934 558 377 245 188 148 114 102 78 57 42 35 29 14
aa aa 212057 3260.4 49 0.0e+00 0 300 2 14 18 18 19 34 37 71 80 117 109 149 245 381 776 1796 3316 5815 9001 12591 14129 13564 12914 11544 10289 9735 9827 10807 11948 12904 13625 14061 11934 8517 5424 3042 1461 650 291 229 149 125 88 59 40 27 27 22 14 15 9
tt tt 213535 3057.9 49 0.0e+00 0 300 3 14 9 33 51 28 29 39 60 79 91 143 264 391 745 1639 3377 5656 9034 12480 13929 13619 13043 11705 10732 10014 9692 10735 12131 12893 13611 14078 12207 8620 5691 3240 1482 688 390 246 146 124 102 66 44 42 26 28 23 15 11
cg cg 100819 2794.5 49 0.0e+00 0 300 4 14 14 24 16 23 37 48 76 104 130 164 228 329 477 875 1540 2342 3275 4241 5034 5439 5760 6386 6996 7311 7369 6944 6354 5648 5223 4899 4240 3172 2202 1424 834 475 302 202 145 111 107 63 64 42 31 28 26 22 9
at at 146950 2625.2 49 0.0e+00 0 300 5 12 18 8 17 23 28 33 38 54 72 101 172 259 518 1124 2385 4138 6251 9020 9809 9275 8539 7976 7241 6676 6767 7286 8058 8591 9293 9948 8603 6149 3924 2175 1059 516 263 142 117 66 63 40 25 21 13 19 10 7 8
ta ta 121393 1801.3 49 0.0e+00 0 300 6 5 11 10 16 12 36 26 41 52 54 81 127 219 426 921 1894 3390 5295 7354 8072 7620 7102 6494 6142 5684 5827 6230 6659 7119 7659 8056 6975 5039 3144 1721 837 418 188 114 91 65 52 31 23 21 10 10 10 5 5
cc cc 271606 1373.6 49 0.0e+00 0 300 7 30 24 32 40 55 66 89 129 177 211 281 447 750 1246 2421 4318 6675 9730 12837 14584 15206 15758 16486 16782 17479 17868 17267 16488 15742 15364 14623 12879 9378 6435 4076 2245 1212 649 396 297 188 157 112 91 72 59 46 52 37 20
gg gg 272169 1356.6 49 0.0e+00 0 300 8 15 29 32 36 58 75 105 125 156 227 307 450 639 1196 2405 4354 6996 9904 13133 14977 15178 15938 16507 17366 17791 17396 17154 16308 15940 15052 14609 12377 9075 6576 4089 2324 1053 678 410 250 193 164 134 101 79 66 59 31 27 25
ca ca 238658 398.2 49 3.3e-56 5.2e-55 54.28 9 20 23 15 22 36 53 67 96 110 151 239 298 497 942 1837 3628 6055 8910 12127 13502 13384 13801 14680 15270 14919 14347 13876 13915 14130 13778 13903 11968 8782 5684 3538 1755 871 427 260 190 138 90 85 51 53 41 30 27 23 14
tg tg 239135 343.1 49 9.2e-46 1.5e-44 43.83 10 14 18 26 28 49 43 75 76 112 158 177 324 461 895 1892 3720 6040 9064 12409 13885 13856 13994 14014 14054 14590 15034 15091 14435 13692 13486 13477 11793 8628 5825 3458 1823 851 507 298 193 124 123 96 60 45 39 26 20 21 16
tc tc 193363 299.1 49 1.3e-37 2.1e-36 35.67 11 20 22 25 29 42 41 44 92 91 133 166 242 427 770 1585 3047 5085 7563 10471 11546 11607 11551 11424 10737 10384 10727 10713 11172 11452 11489 11630 10068 7541 4885 2965 1514 732 420 247 148 148 108 51 59 44 32 25 20 17 12
ag ag 249542 269.4 49 3.3e-32 5.3e-31 30.28 12 7 26 28 28 36 72 73 106 132 176 245 341 550 1002 2139 3818 6442 9516 12867 14477 14447 14645 14930 15728 15583 14893 14383 14304 14628 14502 14265 12193 9042 5915 3646 1891 880 459 300 205 151 107 89 70 53 49 42 23 19 19
ga ga 193537 267.3 49 7.9e-32 1.3e-30 29.90 13 9 22 20 25 35 54 65 58 102 134 189 285 413 735 1750 3106 5198 7633 10423 11814 11623 11362 11025 10939 10785 10555 10757 11161 11460 11653 11572 10005 7348 4769 2918 1543 686 368 249 175 119 98 79 52 34 44 36 17 18 17
ct ct 248990 251.9 49 4.4e-29 7e-28 27.16 14 16 21 29 44 45 50 70 113 119 149 213 315 536 959 1991 3824 6332 9385 12588 14197 14521 14388 14645 14321 14978 15485 15566 15094 14608 14340 14152 12336 9260 6094 3618 1971 893 506 342 208 186 133 82 71 70 40 25 23 24 14
ac ac 157272 94.5 49 1.0e-04 0.0017 2.78 15 12 14 10 17 22 38 58 57 77 88 165 200 336 565 1239 2424 4094 6092 8073 9137 9004 9097 9416 9412 9195 9057 9154 9277 9332 9273 9278 8128 5982 3853 2359 1182 559 268 184 136 103 74 62 32 36 35 16 17 24 9
gt gt 158060 94.1 49 1.2e-04 0.0018 2.74 16 9 13 20 19 32 36 44 60 86 113 118 210 294 612 1287 2447 4076 6269 8572 9479 9346 9501 9216 9203 9086 9362 9308 9177 9046 9124 9089 7975 5782 3915 2327 1220 576 332 187 123 86 75 55 46 24 23 20 15 15 10 
 Host name	rsat
 Job started	2026-01-08.112036
 Job done	2026-01-08.112054
 Seconds	18.73
	user	18.73
	system	0.01
	cuser	0.01
;	csystem	0