; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/01/08/peak-motifs.2026-01-08.113908_2026-01-08.113908_nI4Dk5/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/01/08/peak-motifs.2026-01-08.113908_2026-01-08.113908_nI4Dk5/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/01/08/peak-motifs.2026-01-08.113908_2026-01-08.113908_nI4Dk5/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/01/08/peak-motifs.2026-01-08.113908_2026-01-08.113908_nI4Dk5/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/01/08/peak-motifs.2026-01-08.113908_2026-01-08.113908_nI4Dk5/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	2	1	0	0	0	0	0	0	0	0	1	2	0	0	0	3	0
c	9	2	8	12	12	0	2	12	13	1	3	10	11	1	9	6	5
g	3	9	2	2	2	14	3	2	0	13	1	2	3	8	0	5	6
t	0	2	4	0	0	0	9	0	1	0	9	0	0	5	5	0	3
//
; Sites	14
>site_0
ACCCCGTCTCTACTCAC
>site_1
AGCGCGGCCGACCGCAG
>site_2
GTCCCGGGCGTCGGCGT
>site_3
CACCGGGCCGCGCTCGG
>site_4
CTCCCGTCCGCCCGTCC
>site_5
CGTCCGCCCGTCCGCGG
>site_6
CGCCCGTCCGCGGCCCG
>site_7
GGCCCGTCCGTCCGTCC
>site_8
CGTCCGTCCGTCCGTCC
>site_9
CGTCCGTCCGTCCGTCG
>site_10
CGTCCGTCCGTCGTCCT
>site_11
GCCGGGCCCGTCCTCGC
>site_12
CGGCCGTCCGGCCGCGT
>site_13
CGGCCGTGCGTACTTAG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/08/peak-motifs.2026-01-08.113908_2026-01-08.113908_nI4Dk5/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/08/peak-motifs.2026-01-08.113908_2026-01-08.113908_nI4Dk5/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m1_rc.png
;
a	1	2	1	1	4	1	0	1	1	1	0	0	0	1	1	1	2	0
c	5	5	7	0	2	3	10	0	8	0	0	10	9	4	1	1	5	7
g	4	1	1	8	3	6	0	8	1	9	10	0	1	4	6	4	1	3
t	0	2	1	1	1	0	0	1	0	0	0	0	0	1	2	4	2	0
//
; Sites	10
>site_0
GCGGGACTCGGCCCTTTG
>site_1
CACGCGCGGGGCCTCACC
>site_2
GCCGACCGCAGCCGGGAC
>site_3
CTCGAGCGCGGCCGACCG
>site_4
CACGGGCGAGGCCGGGGC
>site_5
GCCTGCCGCGGCCCTTCC
>site_6
CCCGAGCGCGGCCCGGTG
>site_7
CCCGTCCGCGGCCCGTCC
>site_8
GTAGAGCGCGGCGAGGCC
>site_9
AGTACGCACGGCCGGTAC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/08/peak-motifs.2026-01-08.113908_2026-01-08.113908_nI4Dk5/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/08/peak-motifs.2026-01-08.113908_2026-01-08.113908_nI4Dk5/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m2_rc.png
;
a	0	1	0	0	0	0	1	0	0	0	1	2	0	2
c	3	3	5	0	10	10	1	10	0	10	2	4	2	3
g	4	5	5	9	0	0	3	0	10	0	2	2	7	4
t	3	1	0	1	0	0	5	0	0	0	5	2	1	1
//
; Sites	10
>site_0
TCGGCCGCGCTCGA
>site_1
CCGGCCTCGCCCGT
>site_2
TGCGCCTCGCTTCC
>site_3
GACGCCACGCGGGG
>site_4
CGGGCCGCGCTCGG
>site_5
TCCTCCTCGCTTGC
>site_6
GGCGCCCCGCAAGC
>site_7
GGGGCCTCGCGAGG
>site_8
GGGGCCTCGCCGCG
>site_9
CTCGCCGCGCTCTA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/08/peak-motifs.2026-01-08.113908_2026-01-08.113908_nI4Dk5/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/08/peak-motifs.2026-01-08.113908_2026-01-08.113908_nI4Dk5/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m3_rc.png
;
a	3	4	1	1	2	2	0	2	0	1	0	1	5	1
c	10	5	17	16	17	1	0	20	19	2	5	3	8	8
g	8	8	3	5	2	19	20	0	1	17	16	17	5	10
t	1	5	1	0	1	0	2	0	2	2	1	1	4	3
//
; Sites	22
>site_0
AACCCAGCCTGGGC
>site_1
GCCCAGGCTGGGTT
>site_2
GTCCCGGCTGCGGT
>site_3
ACCGCAGCCGGGAC
>site_4
TTCCCCGCCGGCCG
>site_5
CGGCCGGCGGGGAA
>site_6
GCCCCGGCCTCGCC
>site_7
GGCGAGGCCGGGGC
>site_8
CTCCCGGCCCGCTC
>site_9
GAGCGGGCCGGGAG
>site_10
AGCGCGGCCCGGTG
>site_11
CACCGGGCCGCGCT
>site_12
CTCCCGGACAGGCG
>site_13
CGCCTGTCCGGGAG
>site_14
CGCCCGTCCGCGGC
>site_15
GCCGCGGACGGGCG
>site_16
CCCCCGGCCGGCCG
>site_17
CGGCCGGCCGGGGG
>site_18
CGTCCGGCCGCGTC
>site_19
GACGCGGCCGGACG
>site_20
CGCACGGCCGGTAC
>site_21
GTACCGGCCGTGCG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/08/peak-motifs.2026-01-08.113908_2026-01-08.113908_nI4Dk5/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/08/peak-motifs.2026-01-08.113908_2026-01-08.113908_nI4Dk5/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m4_rc.png
;
a	0	3	0	0	2	0	2	10	8	0	1	3	0
c	6	4	14	2	2	0	1	1	3	1	0	6	8
g	7	5	0	11	10	14	11	3	2	13	13	5	6
t	1	2	0	1	0	0	0	0	1	0	0	0	0
//
; Sites	14
>site_0
GGCGGGGAAGGGG
>site_1
CGCGAGAAAGGCG
>site_2
GACGGGGAAGGCG
>site_3
CACGGGCGAGGCC
>site_4
CCCGGGGGACGCG
>site_5
GCCGCGGCAGGCC
>site_6
CTCGGGGAAGGGC
>site_7
GCCCGGGACGGAC
>site_8
CGCGGGGAGGACG
>site_9
GTCCGGGAGGGAC
>site_10
GCCGCGGACGGGC
>site_11
CGCGAGGACGGGC
>site_12
GGCGGGGGTGGGG
>site_13
TACTGGAAAGGAC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/08/peak-motifs.2026-01-08.113908_2026-01-08.113908_nI4Dk5/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/08/peak-motifs.2026-01-08.113908_2026-01-08.113908_nI4Dk5/results/oligos_7nt_test_vs_ctrl//peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2026-01-08.113930
; Job done	2026-01-08.113932
; Seconds	0.12
;	user	0.12
;	system	0.05
;	cuser	1.29
;	csystem	0.16
