RSAT - peak-motifs result

Analysis: ZBTB24_PROM (10/01/2026 16:15)

peak-motifs  -v 1 -title ZBTB24_PROM -i $RSAT/public_html/tmp/www-data/2026/01/10/peak-motifs.2026-01-10.161422_2026-01-10.161422_Je0sDO/peak-motifspeak_seq -max_seq_len 1000 -markov auto -disco oligos,positions -nmotifs 5 -minol 6 -maxol 7 -no_merge_lengths -2str -origin center -scan_markov 1 -task purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,scan -prefix peak-motifs -noov -img_format png -outdir $RSAT/public_html/tmp/www-data/2026/01/10/peak-motifs.2026-01-10.161422_2026-01-10.161422_Je0sDO

motif discovery
oligos_6nt_mkv2	oligos_6nt_mkv2_m1 assembly: cccaggacctgcc (sig=7.41; e-value=3.9e-08) RC: ggcaggtcctggg oligos_6nt_mkv2_m2 assembly: gcgccgcgcggcgc (sig=6.90; e-value=1.3e-07) RC: gcgccgcgcggcgc oligos_6nt_mkv2_m3 assembly: gccgggcggggcg (sig=5.82; e-value=1.5e-06) RC: cgccccgcccggc oligos_6nt_mkv2_m4 assembly: tacaaat (sig=4.80; e-value=1.6e-05) RC: atttgta oligos_6nt_mkv2_m5 assembly: aggaag (sig=3.67; e-value=0.00021) RC: cttcct	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
positions_6nt	Not a single significant pattern	[positions_6nt]
oligos_7nt_mkv2	oligos_7nt_mkv2_m1 assembly: tccaggacctgg (sig=14.91; e-value=1.2e-15) RC: ccaggtcctgga oligos_7nt_mkv2_m2 assembly: cgcgccgccgcgcggg (sig=7.97; e-value=1.1e-08) RC: cccgcgcggcggcgcg oligos_7nt_mkv2_m3 assembly: ggccccgccccg (sig=7.84; e-value=1.4e-08) RC: cggggcggggcc oligos_7nt_mkv2_m4 assembly: aaagaaaa (sig=3.49; e-value=0.00032) RC: ttttcttt oligos_7nt_mkv2_m5 assembly: aaaaataaata (sig=3.43; e-value=0.00037) RC: tatttattttt	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
positions_7nt	Not a single significant pattern	[positions_7nt]

Motif discovery
Motif 1   oligos_6nt_mkv2_m1	k-mer sig=7.41; evalue=3.9e-08 sybcCAGGACCTgccrs SYGGCAGGTCCTGGVRS	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 54 (18.69%) Max nb of predicted sites per peak: 3  (chr3:39192613-39193669) Mean nb of predicted sites per peak: 1.41	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 2   oligos_6nt_mkv2_m2	k-mer sig=6.90; evalue=1.3e-07 ssgCGCCGcgCGGCGcss SSGCGCCGCGCGGCGCSS	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 44 (15.22%) Max nb of predicted sites per peak: 22  (chr3:126194146-126194747) Mean nb of predicted sites per peak: 4.18	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 3   oligos_6nt_mkv2_m3	k-mer sig=5.82; evalue=1.5e-06 gsGCcGGGCGGgGcggg CCCGCCCCGCCCGGCSC	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 78 (26.99%) Max nb of predicted sites per peak: 19  (chr3:126194146-126194747) Mean nb of predicted sites per peak: 2.37	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 4   oligos_6nt_mkv2_m4	k-mer sig=4.80; evalue=1.6e-05 wmTACAAATww WWATTTGTAKW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 57 (19.72%) Max nb of predicted sites per peak: 9  (chr3:119315684-119315845) Mean nb of predicted sites per peak: 1.61	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 5   oligos_6nt_mkv2_m5	k-mer sig=3.67; evalue=0.00021 rvAGGAAGrr YYCTTCCTBY	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 58 (20.07%) Max nb of predicted sites per peak: 4  (chr3:149096325-149096506) Mean nb of predicted sites per peak: 1.21	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 6   oligos_7nt_mkv2_m1	k-mer sig=14.91; evalue=1.2e-15 cykcCAGGACCTggmr YKCCAGGTCCTGGMRG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 56 (19.38%) Max nb of predicted sites per peak: 3  (chr3:50307278-50307536) Mean nb of predicted sites per peak: 1.55	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 7   oligos_7nt_mkv2_m2	k-mer sig=7.97; evalue=1.1e-08 sssgCGCCGCCgCgcssgss SSCSSGCGCGGCGGCGCSSS	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 76 (26.30%) Max nb of predicted sites per peak: 25  (chr3:126194146-126194747) Mean nb of predicted sites per peak: 3.24	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 8   oligos_7nt_mkv2_m3	k-mer sig=7.84; evalue=1.4e-08 ccsgCCCCGCCCCgss SSCGGGGCGGGGCSGG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 69 (23.88%) Max nb of predicted sites per peak: 13  (chr3:126194146-126194747) Mean nb of predicted sites per peak: 2.49	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 9   oligos_7nt_mkv2_m4	k-mer sig=3.49; evalue=0.00032 aAAAArAAAAAa TTTTTTYTTTTT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 53 (18.34%) Max nb of predicted sites per peak: 32  (chr3:128369765-128369928) Mean nb of predicted sites per peak: 6.55	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 10   oligos_7nt_mkv2_m5	k-mer sig=3.43; evalue=0.00037 wwAAAAATAAATaww WWTATTTATTTTTWW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 80 (27.68%) Max nb of predicted sites per peak: 32  (chr3:128369765-128369928) Mean nb of predicted sites per peak: 4.45	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]

Command:  peak-motifs  -v 1 -title ZBTB24_PROM -i $RSAT/public_html/tmp/www-data/2026/01/10/peak-motifs.2026-01-10.161422_2026-01-10.161422_Je0sDO/peak-motifspeak_seq -max_seq_len 1000 -markov auto -disco oligos,positions -nmotifs 5 -minol 6 -maxol 7 -no_merge_lengths -2str -origin center -scan_markov 1 -task purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,scan -prefix peak-motifs -noov -img_format png -outdir $RSAT/public_html/tmp/www-data/2026/01/10/peak-motifs.2026-01-10.161422_2026-01-10.161422_Je0sDO

Warning: Not a single pattern was found in file tmp/www-data/2026/01/10/peak-motifs.2026-01-10.161422_2026-01-10.161422_Je0sDO/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50.tab

Warning: Not a single pattern was found in file tmp/www-data/2026/01/10/peak-motifs.2026-01-10.161422_2026-01-10.161422_Je0sDO/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50.tab