AC  assembly_1
XX
ID  tccaggacctgg
XX
DE  nnTCCAGGACCTGGnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         0.00      0.00      0.00     15.00
4         0.00     17.54      0.00      0.00
5         0.00     17.54      0.00      0.00
6        52.04      0.00      0.00      0.00
7         0.00      0.00     52.04      0.00
8         0.00      0.00     52.04      0.00
9        52.04      0.00      0.00      0.00
10        0.00     52.04      0.00      0.00
11        0.00     52.04      0.00      0.00
12        0.00      0.00      0.00     52.04
13        0.00      0.00     19.68      0.00
14        0.00      0.00      5.75      0.00
15        0.00      0.00      0.00      0.00
16        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 1
CC  id: assembly_1
CC  name: tccaggacctgg
CC  asmb.seed: aggacct
CC  matrix.nb: 1
CC  sites: 6
CC  consensus.strict: --TCCAGGACCTGG--
CC  consensus.strict.rc: --CCAGGTCCTGGA--
CC  consensus.IUPAC: nnTCCAGGACCTGGnn
CC  consensus.IUPAC.rc: NNCCAGGTCCTGGANN
CC  consensus.regexp: [acgt][acgt]TCCAGGACCTGG[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]CCAGGTCCTGGA[ACGT][ACGT]
XX
//
AC  assembly_2
XX
ID  attttta
XX
DE  nnATTTTTAnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3        36.40      0.00      0.00      0.00
4         0.00      0.00      0.00     36.40
5         0.00      0.00      0.00     36.40
6         0.00      0.00      0.00     36.40
7         0.00      0.00      0.00     36.40
8         0.00      0.00      0.00     36.40
9        36.40      0.00      0.00      0.00
10        0.00      0.00      0.00      0.00
11        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 2
CC  id: assembly_2
CC  name: attttta
CC  asmb.seed: attttta
CC  matrix.nb: 2
CC  sites: 1
CC  consensus.strict: --ATTTTTA--
CC  consensus.strict.rc: --TAAAAAT--
CC  consensus.IUPAC: nnATTTTTAnn
CC  consensus.IUPAC.rc: NNTAAAAATNN
CC  consensus.regexp: [acgt][acgt]ATTTTTA[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]TAAAAAT[ACGT][ACGT]
XX
//
AC  assembly_3
XX
ID  cgccctcg
XX
DE  nnCGCCCTCGnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         0.00     23.41      0.00      0.00
4         0.00      0.00     23.41      0.00
5         0.00     23.41      0.00      0.00
6         0.00     23.41      0.00      0.00
7         0.00     23.41      0.00      0.00
8         0.00      0.00      0.00     23.41
9         0.00     23.41      0.00      0.00
10        0.00      0.00      3.89      0.00
11        0.00      0.00      0.00      0.00
12        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 3
CC  id: assembly_3
CC  name: cgccctcg
CC  asmb.seed: cgccctc
CC  matrix.nb: 3
CC  sites: 2
CC  consensus.strict: --CGCCCTCG--
CC  consensus.strict.rc: --CGAGGGCG--
CC  consensus.IUPAC: nnCGCCCTCGnn
CC  consensus.IUPAC.rc: NNCGAGGGCGNN
CC  consensus.regexp: [acgt][acgt]CGCCCTCG[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]CGAGGGCG[ACGT][ACGT]
XX
//
AC  assembly_4
XX
ID  cgccccc
XX
DE  nnCGCCCCCnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         0.00     21.29      0.00      0.00
4         0.00      0.00     21.29      0.00
5         0.00     21.29      0.00      0.00
6         0.00     21.29      0.00      0.00
7         0.00     21.29      0.00      0.00
8         0.00     21.29      0.00      0.00
9         0.00     21.29      0.00      0.00
10        0.00      0.00      0.00      0.00
11        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 4
CC  id: assembly_4
CC  name: cgccccc
CC  asmb.seed: cgccccc
CC  matrix.nb: 4
CC  sites: 1
CC  consensus.strict: --CGCCCCC--
CC  consensus.strict.rc: --GGGGGCG--
CC  consensus.IUPAC: nnCGCCCCCnn
CC  consensus.IUPAC.rc: NNGGGGGCGNN
CC  consensus.regexp: [acgt][acgt]CGCCCCC[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]GGGGGCG[ACGT][ACGT]
XX
//
AC  assembly_5
XX
ID  cgcaggcg
XX
DE  nnCGCAGGCGnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         0.00     19.07      0.00      0.00
4         0.00      0.00     19.07      0.00
5         0.00     19.07      0.00      0.00
6        19.07      0.00      0.00      0.00
7         0.00      0.00     19.07      0.00
8         0.00      0.00     19.07      0.00
9         0.00     19.07      0.00      0.00
10        0.00      0.00     15.01      0.00
11        0.00      0.00      0.00      0.00
12        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 5
CC  id: assembly_5
CC  name: cgcaggcg
CC  asmb.seed: cgcaggc
CC  matrix.nb: 5
CC  sites: 2
CC  consensus.strict: --CGCAGGCG--
CC  consensus.strict.rc: --CGCCTGCG--
CC  consensus.IUPAC: nnCGCAGGCGnn
CC  consensus.IUPAC.rc: NNCGCCTGCGNN
CC  consensus.regexp: [acgt][acgt]CGCAGGCG[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]CGCCTGCG[ACGT][ACGT]
XX
//
