/var/www/html/rsat/public_html/tmp/www-data/2026/01/20/matrix-clustering_2026-01-20.134936_gUqtHu/matrix-clustering_tables/alignment_table.tab


id name cluster strand offset_up offset_down width aligned_consensus aligned_consensus_rc
Collection_1_m4_GTVYKPYYSK_HTCS_Rgu-2 GTVYKPYYSK_HTCS_Rgu-2 cluster_1 D 14 4 52 ++++++++++++++TrrAmwAwwkTmCAwwwwwwTGkAmwwTwkTyyA++++ ++++TRRAMWAWWKTMCAWWWWWWTGKAMWWTWKTYYA++++++++++++++
Collection_1_m18_GTVYRPFYSK_HTCS_Rgu-2 GTVYRPFYSK_HTCS_Rgu-2 cluster_1 D 14 4 52 ++++++++++++++TrgAmdAwtwTmCAwwwwwwTGkAwawThkTcyA++++ ++++TRGAMDAWTWTMCAWWWWWWTGKAWAWTHKTCYA++++++++++++++
Collection_1_m10_SVQYRPSYAK_HTCS_Fru SVQYRPSYAK_HTCS_Fru cluster_1 D 16 6 52 ++++++++++++++++rwwwswWwywwwwwwwwwwwwrwWwswwwy++++++ ++++++RWWWSWWWYWWWWWWWWWWWWRWWWSWWWY++++++++++++++++
Collection_1_m20_SVQYRPSYTK_HTCS_Fru SVQYRPSYTK_HTCS_Fru cluster_1 D 16 6 52 ++++++++++++++++gwwWswWwywwwwwwwwwwwwrwWwsWwwc++++++ ++++++GWWWSWWWYWWWWWWWWWWWWRWWWSWWWC++++++++++++++++
Collection_1_m24_GTVYKPFYSK_HTCS_Rgu-2 GTVYKPFYSK_HTCS_Rgu-2 cluster_1 D 14 4 52 ++++++++++++++TRGAVWAWTKTHCAWWWWWWTGDAMAWTWBTCYA++++ ++++TrgAvWAwTkThCAwwwwwwTGdAmAwTWbTcyA++++++++++++++
Collection_1_m2_GSIYRPFYSK_HTCS_Rgu-2 GSIYRPFYSK_HTCS_Rgu-2 cluster_1 D 14 4 52 ++++++++++++++TRKABWAWWRTMCAWWWWWWTGKAYWWTWVTMYA++++ ++++TrkAbwAwwrTmCAwwwwwwTGkAywwTwvTmyA++++++++++++++
Collection_1_m13_SSLNKPKYAR_HTCS_Ara-1 SSLNKPKYAR_HTCS_Ara-1 cluster_1 D 9 13 52 +++++++++wGkysrmCwmAwrwrywywTkwGkysrmCw+++++++++++++ +++++++++++++WGKYSRMCWMAWRWRYWYWTKWGKYSRMCW+++++++++
Collection_1_m16_SSLNKPKYTR_HTCS_Ara-1 SSLNKPKYTR_HTCS_Ara-1 cluster_1 D 9 13 52 +++++++++wGkysrmCmwwhrarytydwwkGkysrmCw+++++++++++++ +++++++++++++WGKYSRMCMWWHRARYTYDWWKGKYSRMCW+++++++++
Collection_1_m19_PRTHRSNHST_RhaS PRTHRSNHST_RhaS cluster_1 D 0 1 52 ACCTTYvymhtwyTGCCAnnnnnnnnnnnnnnnTGGCArwadkrbRAAGGT+ +ACCTTYVYMHTWYTGCCANNNNNNNNNNNNNNNTGGCARWADKRBRAAGGT
Collection_1_m27_PRTNRSNYSS_RhaS PRTNRSNYSS_RhaS cluster_1 D 0 1 52 wyCTTsrkhwhwmTGCCAnnnnnnnnnnnnnnnTGGCAkwdwdmysAAGrw+ +WYCTTSRKHWHWMTGCCANNNNNNNNNNNNNNNTGGCAKWDWDMYSAAGRW
Collection_1_m1_SSNHLSSYAT_HTCS_Hep SSNHLSSYAT_HTCS_Hep cluster_1 D 15 6 52 +++++++++++++++wCMWATwTrdwwwwwwwwwwwhyAwATWKGw++++++ ++++++WCMWATWTRDWWWWWWWWWWWHYAWATWKGW+++++++++++++++
Collection_1_m6_SSNHLPSYAT_HTCS_Hep SSNHLPSYAT_HTCS_Hep cluster_1 D 15 6 52 +++++++++++++++wyaAwwTTrwwwwwwwwwwwwwyAAwwTtrw++++++ ++++++WYAAWWTTRWWWWWWWWWWWWWYAAWWTTRW+++++++++++++++
Collection_1_m12_SSRSHQLYSR_AraC SSRSHQLYSR_AraC cluster_1 D 13 1 52 +++++++++++++TadsrawwkwwycsmTAwwwwTAksgrmwmwwtyshtR+ +YADSRAWWKWKYCSMTAWWWWTAKSGRWWMWWTYSHTA+++++++++++++
Collection_1_m14_SSRAHQLYSR_AraC SSRAHQLYSR_AraC cluster_1 D 13 1 52 +++++++++++++hdrsrkdwawdTrsmTRwwwwYAksyAhwtwhmysyhd+ +HDRSRKDWAWDTRSMTRWWWWYAKSYAHWTWHMYSYHD+++++++++++++
Collection_1_m8_GVQYRPSYTR_HTCS_Fru GVQYRPSYTR_HTCS_Fru cluster_1 D 16 6 52 ++++++++++++++++RMAWSWWDMNNNNNNNNNNNNKHWWSWTKY++++++ ++++++RMAwswWdmnnnnnnnnnnnnkhWwswTKY++++++++++++++++
Collection_1_m26_SSVFKPRYSK_HTCS_Rgu-1 SSVFKPRYSK_HTCS_Rgu-1 cluster_1 D 15 4 52 +++++++++++++++swrwAawTwywvwwwwwwwwwbwrwAwtTwyws++++ ++++SWRWAAWTWYWVWWWWWWWWWBWRWAWTTWYWS+++++++++++++++
Collection_1_m28_SSTYRTGYRQ_HTCS_Ara-2 SSTYRTGYRQ_HTCS_Ara-2 cluster_1 D 16 5 52 ++++++++++++++++wrAwyrwtywwwwwwwwwwwwwrawyrwTyw+++++ +++++WRAWYRWTYWWWWWWWWWWWWWRAWYRWTYW++++++++++++++++
Collection_1_m3_SSTYRSVYRQ_HTCS_Ara-2 SSTYRSVYRQ_HTCS_Ara-2 cluster_1 D 15 5 52 +++++++++++++++wbwwhdwkhwwwwwwwwwwwwwwdmwhdwwvw+++++ +++++WBWWHDWKHWWWWWWWWWWWWWWDMWHDWWVW+++++++++++++++
Collection_1_m7_ATNFTSRYSK_HTCS_Hya ATNFTSRYSK_HTCS_Hya cluster_1 D 15 5 52 +++++++++++++++wGwAywrTwywwwwwwwwwwwwrwAywrTwCw+++++ +++++WGWAYWRTWYWWWWWWWWWWWWRWAYWRTWCW+++++++++++++++
Collection_1_m11_SRQYRRGTYK_HTCS_Man-2 SRQYRRGTYK_HTCS_Man-2 cluster_1 D 11 4 52 +++++++++++dkWCRhwwwhdbRdmwnnnnnwkhYvhdwwwdYGWmh++++ ++++DKWCRHWWWHDBRDMWNNNNNWKHYVHDWWWDYGWMH+++++++++++
Collection_1_m21_SRSYRKVTFK_HTCS_Man-1_3 SRSYRKVTFK_HTCS_Man-1_3 cluster_1 D 11 4 52 +++++++++++kkryrcwdwhrTkhmmnnnnnkkdmAydwhwgyrymm++++ ++++KKRYRCWDWHRTKHMMNNNNNKKDMAYDWHWGYRYMM+++++++++++
Collection_1_m5_SSWRKTEHFS_RhaR SSWRKTEHFS_RhaR cluster_1 D 15 9 52 +++++++++++++++TTTTTGATTTTTTTTTTTTTTGATTTGR+++++++++ +++++++++yCAAATCaaaaaaaaaaaaaaTCAAAAa+++++++++++++++
Collection_1_m9_SSSYRPKYAT_HTCS_Aga-1 SSSYRPKYAT_HTCS_Aga-1 cluster_1 D 16 2 52 ++++++++++++++++ykrTmwwywTTyrwwwwwwwwyrAAwrwwkAymr++ ++YKRTMWWYWTTYRWWWWWWWWYRAAWRWWKAYMR++++++++++++++++
Collection_1_m22_SASYTISYST_HTCS_Ogl-2 SASYTISYST_HTCS_Ogl-2 cluster_1 D 14 0 52 ++++++++++++++dTTmRhrMWThwYkMWwwwwwwWKmRwdAWKydYkAAh DTTMRHRMWTHWYKMWWWWWWWWKMRWDAWKYDYKAAH++++++++++++++
Collection_1_m23_SRVRQSNYSV_RhaR SRVRQSNYSV_RhaR cluster_1 D 0 1 52 ACCTTAAATTTTYRACGHHHHHHHHHHHHHHHHHSGTCKWTTTTTCAAGAW+ +wTCTTGAAAAAwmGACsdddddddddddddddddCGTyrAAAATTTAAGGT
Collection_1_m15_SSTYRTVYRQ_HTCS_Ara-2 SSTYRTVYRQ_HTCS_Ara-2 cluster_1 D 15 5 52 +++++++++++++++WRMWMKWKYWNNNNNNNNNNNNWRMWMKWKYW+++++ +++++wrmwmkwkywnnnnnnnnnnnnwrmwmkwkyw+++++++++++++++
Collection_1_m25_SKQYRHSYSK_HTCS_Pga SKQYRHSYSK_HTCS_Pga cluster_1 D 14 3 52 ++++++++++++++WYMGWYYKRWYWTWNNNNNNNWAWRWYMRRWCKRW+++ +++wymGwyykrwywTwnnnnnnnwAwrwymrrwCkrw++++++++++++++
Collection_1_m17_SYHHRTSYIT_AdaA SYHHRTSYIT_AdaA cluster_1 R 18 18 52 ++++++++++++++++++ATWKYRWKATMWYRMW++++++++++++++++++ ++++++++++++++++++wkyrwkATmwyrmwAT++++++++++++++++++