/var/www/html/rsat/public_html/tmp/www-data/2026/01/22/peak-motifs.2026-01-22.084217_2026-01-22.084217_H5wC85/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab 
 position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2026/01/22/peak-motifs.2026-01-22.084217_2026-01-22.084217_H5wC85/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 2 -ci 20 -img_format png -title WT24h-all -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2026/01/22/peak-motifs.2026-01-22.084217_2026-01-22.084217_H5wC85/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Citation: van Helden, et al. (2000).  Nucleic Acids Res 28, 1000-1010.
 Sequence file                	$RSAT/public_html/tmp/www-data/2026/01/22/peak-motifs.2026-01-22.084217_2026-01-22.084217_H5wC85/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta
 Sequence format              	fasta
 Sequence type                	dna
 Output file                  	$RSAT/public_html/tmp/www-data/2026/01/22/peak-motifs.2026-01-22.084217_2026-01-22.084217_H5wC85/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Oligo length                 	2
 Occurrences counted  on a single  strands
 Conditions of applicability checked.
 Background model estimation: homogeneous repartition
 Sequence statistics:
	Nb of sequences              	817
	Sum of sequence lengths      	386722
	Min sequence length          	0
	Max sequence length          	1000
	Average sequence length      	473
	Possible positions           	385905
 Oligonucleotide statistics:
	Total occurrences    	382458
 Position interval parameters:
	Position interval    	20
	Number of windows    	50
	Total positions      	385905
	Degrees of freedom   	49
 K-mer clustering parameters:
	Number of clusters   	0
	Clustering method    	complete
 Position intervals:
	window	[min,max]	mid	seq	occ
	1	-25	[-499,-480]	-489.5	49	921
	2	-24	[-479,-460]	-469.5	56	1079
	3	-23	[-459,-440]	-449.5	67	1217
	4	-22	[-439,-420]	-429.5	79	1511
	5	-21	[-419,-400]	-409.5	89	1690
	6	-20	[-399,-380]	-389.5	109	1927
	7	-19	[-379,-360]	-369.5	125	2364
	8	-18	[-359,-340]	-349.5	153	2795
	9	-17	[-339,-320]	-329.5	182	3381
	10	-16	[-319,-300]	-309.5	218	4018
	11	-15	[-299,-280]	-289.5	251	4718
	12	-14	[-279,-260]	-269.5	287	5365
	13	-13	[-259,-240]	-249.5	333	6206
	14	-12	[-239,-220]	-229.5	366	7001
	15	-11	[-219,-200]	-209.5	420	7922
	16	-10	[-199,-180]	-189.5	475	8961
	17	-9	[-179,-160]	-169.5	551	10328
	18	-8	[-159,-140]	-149.5	649	12050
	19	-7	[-139,-120]	-129.5	717	13676
	20	-6	[-119,-100]	-109.5	789	15002
	21	-5	[-99,-80]	-89.5	817	16248
	22	-4	[-79,-60]	-69.5	817	16340
	23	-3	[-59,-40]	-49.5	817	16340
	24	-2	[-39,-20]	-29.5	817	16340
	25	-1	[-19,0]	-9.5	817	16340
	26	0	[1,20]	10.5	817	16340
	27	1	[21,40]	30.5	817	16340
	28	2	[41,60]	50.5	817	16340
	29	3	[61,80]	70.5	817	16340
	30	4	[81,100]	90.5	817	16193
	31	5	[101,120]	110.5	784	14865
	32	6	[121,140]	130.5	715	13544
	33	7	[141,160]	150.5	640	11857
	34	8	[161,180]	170.5	544	10172
	35	9	[181,200]	190.5	470	8849
	36	10	[201,220]	210.5	417	7814
	37	11	[221,240]	230.5	362	6937
	38	12	[241,260]	250.5	327	6122
	39	13	[261,280]	270.5	281	5290
	40	14	[281,300]	290.5	249	4648
	41	15	[301,320]	310.5	215	3946
	42	16	[321,340]	330.5	178	3323
	43	17	[341,360]	350.5	149	2740
	44	18	[361,380]	370.5	123	2333
	45	19	[381,400]	390.5	105	1892
	46	20	[401,420]	410.5	88	1671
	47	21	[421,440]	430.5	79	1486
	48	22	[441,460]	450.5	67	1195
	49	23	[461,480]	470.5	56	1064
	50	24	[481,500]	490.5	48	864

 Column headers
	1	seq            	pattern sequence
	2	id             	pattern identifier
	3	occ            	pattern occurrences
	4	chi2           	observed chi-square
	5	df             	degrees of freedom
	6	Pval           	P-value (probability for one word to be a false positive)
	7	Eval           	E-value; expected number of false positives (Eval = Pval * nb_tests)
	8	sig            	Significance (sig = -log10(Eval))
	9	rank           	rank of the pattern according to sorting criterion
	10	-489.5         	occurrences in window	1	[-499,-480]
	11	-469.5         	occurrences in window	2	[-479,-460]
	12	-449.5         	occurrences in window	3	[-459,-440]
	13	-429.5         	occurrences in window	4	[-439,-420]
	14	-409.5         	occurrences in window	5	[-419,-400]
	15	-389.5         	occurrences in window	6	[-399,-380]
	16	-369.5         	occurrences in window	7	[-379,-360]
	17	-349.5         	occurrences in window	8	[-359,-340]
	18	-329.5         	occurrences in window	9	[-339,-320]
	19	-309.5         	occurrences in window	10	[-319,-300]
	20	-289.5         	occurrences in window	11	[-299,-280]
	21	-269.5         	occurrences in window	12	[-279,-260]
	22	-249.5         	occurrences in window	13	[-259,-240]
	23	-229.5         	occurrences in window	14	[-239,-220]
	24	-209.5         	occurrences in window	15	[-219,-200]
	25	-189.5         	occurrences in window	16	[-199,-180]
	26	-169.5         	occurrences in window	17	[-179,-160]
	27	-149.5         	occurrences in window	18	[-159,-140]
	28	-129.5         	occurrences in window	19	[-139,-120]
	29	-109.5         	occurrences in window	20	[-119,-100]
	30	-89.5          	occurrences in window	21	[-99,-80]
	31	-69.5          	occurrences in window	22	[-79,-60]
	32	-49.5          	occurrences in window	23	[-59,-40]
	33	-29.5          	occurrences in window	24	[-39,-20]
	34	-9.5           	occurrences in window	25	[-19,0]
	35	10.5           	occurrences in window	26	[1,20]
	36	30.5           	occurrences in window	27	[21,40]
	37	50.5           	occurrences in window	28	[41,60]
	38	70.5           	occurrences in window	29	[61,80]
	39	90.5           	occurrences in window	30	[81,100]
	40	110.5          	occurrences in window	31	[101,120]
	41	130.5          	occurrences in window	32	[121,140]
	42	150.5          	occurrences in window	33	[141,160]
	43	170.5          	occurrences in window	34	[161,180]
	44	190.5          	occurrences in window	35	[181,200]
	45	210.5          	occurrences in window	36	[201,220]
	46	230.5          	occurrences in window	37	[221,240]
	47	250.5          	occurrences in window	38	[241,260]
	48	270.5          	occurrences in window	39	[261,280]
	49	290.5          	occurrences in window	40	[281,300]
	50	310.5          	occurrences in window	41	[301,320]
	51	330.5          	occurrences in window	42	[321,340]
	52	350.5          	occurrences in window	43	[341,360]
	53	370.5          	occurrences in window	44	[361,380]
	54	390.5          	occurrences in window	45	[381,400]
	55	410.5          	occurrences in window	46	[401,420]
	56	430.5          	occurrences in window	47	[421,440]
	57	450.5          	occurrences in window	48	[441,460]
	58	470.5          	occurrences in window	49	[461,480]
	59	490.5          	occurrences in window	50	[481,500]
seq id occ chi2 df Pval Eval sig rank -489.5 -469.5 -449.5 -429.5 -409.5 -389.5 -369.5 -349.5 -329.5 -309.5 -289.5 -269.5 -249.5 -229.5 -209.5 -189.5 -169.5 -149.5 -129.5 -109.5 -89.5 -69.5 -49.5 -29.5 -9.5 10.5 30.5 50.5 70.5 90.5 110.5 130.5 150.5 170.5 190.5 210.5 230.5 250.5 270.5 290.5 310.5 330.5 350.5 370.5 390.5 410.5 430.5 450.5 470.5 490.5
aa aa 6599 194.8 49 2.8e-19 4.5e-18 17.34 1 21 19 16 22 27 37 39 30 61 70 68 95 83 108 120 134 168 192 221 212 296 298 362 362 396 364 283 276 285 238 230 222 184 165 125 119 115 97 85 67 68 43 32 36 24 24 21 13 15 11
tt tt 6695 164.4 49 2.2e-14 3.6e-13 12.45 2 14 8 23 24 31 24 42 42 44 68 60 94 93 116 128 143 149 186 204 262 270 302 283 326 352 389 352 307 330 284 258 222 192 181 145 121 89 97 69 76 57 40 37 32 30 32 18 16 24 9
gg gg 42030 87.3 49 6.2e-04 0.0099 2.00 3 76 116 137 177 193 213 251 287 343 449 499 604 739 801 855 1001 1146 1333 1522 1561 1824 1792 1670 1670 1685 1643 1824 1711 1777 1753 1644 1505 1339 1174 979 851 821 686 569 536 434 388 314 285 202 160 143 125 127 96
cc cc 42662 71.6 49 1.9e-02 0.31 0.51 4 104 113 135 147 166 225 264 325 392 419 572 613 716 826 841 1020 1177 1397 1518 1748 1787 1859 1856 1785 1783 1700 1696 1784 1726 1759 1638 1446 1265 1118 1015 896 727 687 605 542 426 346 314 256 219 213 170 116 110 100
at at 6947 71.0 49 2.2e-02 0.34 0.46 5 17 23 14 28 42 36 40 57 67 72 73 73 120 126 174 167 201 213 252 274 267 283 324 292 268 278 303 305 312 323 284 257 225 163 159 133 96 96 106 75 50 69 44 30 35 21 23 23 19 15
gc gc 46886 61.8 49 1.0e-01 1.7 -0.22 6 113 134 164 191 189 258 288 334 427 504 604 659 736 865 994 1059 1257 1506 1662 1830 1986 1963 1904 1908 1842 1913 1905 2002 1940 2000 1789 1638 1482 1245 1096 948 899 757 683 546 518 432 356 314 252 219 199 145 123 108
tg tg 20063 56.7 49 2.1e-01 3.4 -0.53 7 46 67 66 84 85 93 134 156 166 230 222 272 345 335 421 466 505 653 689 730 820 775 861 835 873 902 898 874 934 854 773 717 597 538 463 397 355 286 251 226 217 179 137 112 107 84 68 67 55 43
cg cg 55637 52.7 49 3.3e-01 5.3 -0.72 8 140 158 174 217 252 293 349 409 501 580 693 769 852 1007 1145 1269 1538 1726 1990 2182 2369 2341 2273 2312 2205 2232 2280 2347 2309 2388 2158 1962 1758 1444 1300 1157 1036 912 802 696 596 492 428 367 274 259 243 174 154 125
ta ta 3828 50.0 49 4.3e-01 6.9 -0.84 9 9 7 15 19 17 17 19 27 29 39 55 52 69 77 76 89 83 107 141 141 148 170 175 159 177 169 168 176 150 149 166 154 116 102 75 75 57 61 51 37 29 43 23 27 14 10 14 15 16 14
gt gt 22508 48.5 49 4.9e-01 7.9 -0.90 10 45 76 71 92 108 96 159 174 195 249 234 312 363 375 445 540 615 670 779 876 928 901 933 960 972 987 1026 987 960 946 886 805 659 608 528 483 378 360 275 275 237 193 152 134 103 97 83 71 59 48
tc tc 24500 47.4 49 5.4e-01 8.6 -0.93 11 62 64 84 92 121 107 157 185 221 261 265 326 371 429 561 591 678 739 857 1005 1024 1024 1039 1049 1014 1017 1017 1059 1003 1026 972 821 760 629 581 549 407 418 350 291 254 204 167 132 109 112 98 82 63 53
ac ac 22872 47.2 49 5.5e-01 8.7 -0.94 12 62 56 58 89 108 114 137 173 196 221 307 320 357 414 440 539 601 696 814 849 973 998 968 1024 1044 1002 966 931 974 944 817 787 686 591 524 448 456 370 301 296 219 197 158 139 107 95 93 80 77 56
ca ca 19735 45.1 49 6.3e-01 10 -1.01 13 54 52 46 84 92 93 114 156 196 194 257 272 298 354 432 495 522 625 679 785 809 841 856 870 858 893 839 813 829 777 720 654 584 531 477 376 375 319 261 243 189 165 133 103 100 82 77 64 56 41
ct ct 18925 37.2 49 8.9e-01 14 -1.15 14 58 39 78 76 83 80 113 134 153 208 225 270 298 374 402 437 484 592 660 720 798 783 822 803 819 824 749 819 815 781 710 634 592 494 434 411 333 309 269 215 203 160 132 106 98 86 74 66 56 46
ag ag 18160 32.1 49 9.7e-01 16 -1.19 15 36 58 55 75 68 101 106 127 181 190 235 257 294 333 367 421 471 570 649 721 734 772 770 739 778 799 800 756 726 726 712 671 563 513 391 353 336 294 253 200 181 154 131 107 100 72 73 55 43 43
ga ga 24411 30.1 49 9.8e-01 16 -1.20 16 57 69 65 94 108 140 152 179 209 248 307 317 412 432 483 543 672 743 893 912 1007 1056 1048 1025 1043 1023 1047 993 1048 1043 940 932 765 630 531 479 457 373 345 299 241 198 182 153 118 105 89 83 67 56 
 Host name	rsat
 Job started	2026-01-22.084224
 Job done	2026-01-22.084226
 Seconds	2.4
	user	2.4
	system	0.03
	cuser	0.01
;	csystem	0