/var/www/html/rsat/public_html/tmp/www-data/2026/01/22/peak-motifs.2026-01-22.084320_2026-01-22.084320_l9H2rm/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab 
 position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2026/01/22/peak-motifs.2026-01-22.084320_2026-01-22.084320_l9H2rm/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 2 -ci 20 -img_format png -title WT24h-Inf3 -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2026/01/22/peak-motifs.2026-01-22.084320_2026-01-22.084320_l9H2rm/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Citation: van Helden, et al. (2000).  Nucleic Acids Res 28, 1000-1010.
 Sequence file                	$RSAT/public_html/tmp/www-data/2026/01/22/peak-motifs.2026-01-22.084320_2026-01-22.084320_l9H2rm/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta
 Sequence format              	fasta
 Sequence type                	dna
 Output file                  	$RSAT/public_html/tmp/www-data/2026/01/22/peak-motifs.2026-01-22.084320_2026-01-22.084320_l9H2rm/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Oligo length                 	2
 Occurrences counted  on a single  strands
 Conditions of applicability checked.
 Background model estimation: homogeneous repartition
 Sequence statistics:
	Nb of sequences              	339
	Sum of sequence lengths      	100479
	Min sequence length          	0
	Max sequence length          	963
	Average sequence length      	296
	Possible positions           	100140
 Oligonucleotide statistics:
	Total occurrences    	99580
 Position interval parameters:
	Position interval    	20
	Number of windows    	49
	Total positions      	100140
	Degrees of freedom   	48
 K-mer clustering parameters:
	Number of clusters   	0
	Clustering method    	complete
 Position intervals:
	window	[min,max]	mid	seq	occ
	1	-25	[-499,-480]	-489.5	1	2
	2	-24	[-479,-460]	-469.5	1	20
	3	-23	[-459,-440]	-449.5	1	20
	4	-22	[-439,-420]	-429.5	1	20
	5	-21	[-419,-400]	-409.5	1	20
	6	-20	[-399,-380]	-389.5	1	20
	7	-19	[-379,-360]	-369.5	1	20
	8	-18	[-359,-340]	-349.5	2	36
	9	-17	[-339,-320]	-329.5	5	68
	10	-16	[-319,-300]	-309.5	7	122
	11	-15	[-299,-280]	-289.5	9	175
	12	-14	[-279,-260]	-269.5	12	212
	13	-13	[-259,-240]	-249.5	15	278
	14	-12	[-239,-220]	-229.5	20	350
	15	-11	[-219,-200]	-209.5	35	547
	16	-10	[-199,-180]	-189.5	57	941
	17	-9	[-179,-160]	-169.5	93	1517
	18	-8	[-159,-140]	-149.5	172	2659
	19	-7	[-139,-120]	-129.5	239	4123
	20	-6	[-119,-100]	-109.5	311	5442
	21	-5	[-99,-80]	-89.5	339	6688
	22	-4	[-79,-60]	-69.5	339	6780
	23	-3	[-59,-40]	-49.5	339	6780
	24	-2	[-39,-20]	-29.5	339	6780
	25	-1	[-19,0]	-9.5	339	6780
	26	0	[1,20]	10.5	339	6780
	27	1	[21,40]	30.5	339	6780
	28	2	[41,60]	50.5	339	6780
	29	3	[61,80]	70.5	339	6780
	30	4	[81,100]	90.5	339	6633
	31	5	[101,120]	110.5	306	5305
	32	6	[121,140]	130.5	237	3993
	33	7	[141,160]	150.5	165	2505
	34	8	[161,180]	170.5	89	1448
	35	9	[181,200]	190.5	56	897
	36	10	[201,220]	210.5	33	518
	37	11	[221,240]	230.5	20	341
	38	12	[241,260]	250.5	15	272
	39	13	[261,280]	270.5	12	205
	40	14	[281,300]	290.5	9	170
	41	15	[301,320]	310.5	7	119
	42	16	[321,340]	330.5	4	61
	43	17	[341,360]	350.5	2	33
	44	18	[361,380]	370.5	1	20
	45	19	[381,400]	390.5	1	20
	46	20	[401,420]	410.5	1	20
	47	21	[421,440]	430.5	1	20
	48	22	[441,460]	450.5	1	20
	49	23	[461,480]	470.5	1	20

 Column headers
	1	seq            	pattern sequence
	2	id             	pattern identifier
	3	occ            	pattern occurrences
	4	chi2           	observed chi-square
	5	df             	degrees of freedom
	6	Pval           	P-value (probability for one word to be a false positive)
	7	Eval           	E-value; expected number of false positives (Eval = Pval * nb_tests)
	8	sig            	Significance (sig = -log10(Eval))
	9	rank           	rank of the pattern according to sorting criterion
	10	-489.5         	occurrences in window	1	[-499,-480]
	11	-469.5         	occurrences in window	2	[-479,-460]
	12	-449.5         	occurrences in window	3	[-459,-440]
	13	-429.5         	occurrences in window	4	[-439,-420]
	14	-409.5         	occurrences in window	5	[-419,-400]
	15	-389.5         	occurrences in window	6	[-399,-380]
	16	-369.5         	occurrences in window	7	[-379,-360]
	17	-349.5         	occurrences in window	8	[-359,-340]
	18	-329.5         	occurrences in window	9	[-339,-320]
	19	-309.5         	occurrences in window	10	[-319,-300]
	20	-289.5         	occurrences in window	11	[-299,-280]
	21	-269.5         	occurrences in window	12	[-279,-260]
	22	-249.5         	occurrences in window	13	[-259,-240]
	23	-229.5         	occurrences in window	14	[-239,-220]
	24	-209.5         	occurrences in window	15	[-219,-200]
	25	-189.5         	occurrences in window	16	[-199,-180]
	26	-169.5         	occurrences in window	17	[-179,-160]
	27	-149.5         	occurrences in window	18	[-159,-140]
	28	-129.5         	occurrences in window	19	[-139,-120]
	29	-109.5         	occurrences in window	20	[-119,-100]
	30	-89.5          	occurrences in window	21	[-99,-80]
	31	-69.5          	occurrences in window	22	[-79,-60]
	32	-49.5          	occurrences in window	23	[-59,-40]
	33	-29.5          	occurrences in window	24	[-39,-20]
	34	-9.5           	occurrences in window	25	[-19,0]
	35	10.5           	occurrences in window	26	[1,20]
	36	30.5           	occurrences in window	27	[21,40]
	37	50.5           	occurrences in window	28	[41,60]
	38	70.5           	occurrences in window	29	[61,80]
	39	90.5           	occurrences in window	30	[81,100]
	40	110.5          	occurrences in window	31	[101,120]
	41	130.5          	occurrences in window	32	[121,140]
	42	150.5          	occurrences in window	33	[141,160]
	43	170.5          	occurrences in window	34	[161,180]
	44	190.5          	occurrences in window	35	[181,200]
	45	210.5          	occurrences in window	36	[201,220]
	46	230.5          	occurrences in window	37	[221,240]
	47	250.5          	occurrences in window	38	[241,260]
	48	270.5          	occurrences in window	39	[261,280]
	49	290.5          	occurrences in window	40	[281,300]
	50	310.5          	occurrences in window	41	[301,320]
	51	330.5          	occurrences in window	42	[321,340]
	52	350.5          	occurrences in window	43	[341,360]
	53	370.5          	occurrences in window	44	[361,380]
	54	390.5          	occurrences in window	45	[381,400]
	55	410.5          	occurrences in window	46	[401,420]
	56	430.5          	occurrences in window	47	[421,440]
	57	450.5          	occurrences in window	48	[441,460]
	58	470.5          	occurrences in window	49	[461,480]
seq id occ chi2 df Pval Eval sig rank -489.5 -469.5 -449.5 -429.5 -409.5 -389.5 -369.5 -349.5 -329.5 -309.5 -289.5 -269.5 -249.5 -229.5 -209.5 -189.5 -169.5 -149.5 -129.5 -109.5 -89.5 -69.5 -49.5 -29.5 -9.5 10.5 30.5 50.5 70.5 90.5 110.5 130.5 150.5 170.5 190.5 210.5 230.5 250.5 270.5 290.5 310.5 330.5 350.5 370.5 390.5 410.5 430.5 450.5 470.5
aa aa 1843 94.0 48 8.2e-05 0.0013 2.88 1 0 0 1 1 1 0 0 0 3 5 1 5 6 6 16 15 23 53 59 88 130 107 154 172 166 169 109 109 101 99 83 61 36 21 13 10 1 7 3 5 1 0 0 0 2 0 0 1 0
gg gg 10588 45.2 48 5.9e-01 9.4 -0.97 2 0 0 4 2 5 1 3 3 7 18 12 23 28 37 49 99 164 259 450 579 734 693 673 665 684 680 753 735 735 695 586 431 308 178 97 58 50 23 21 13 14 10 5 0 1 1 2 0 0
tt tt 1858 43.4 48 6.6e-01 11 -1.02 3 0 0 0 0 0 0 0 1 1 3 2 4 4 8 7 18 25 41 59 107 108 132 108 146 156 156 136 115 143 110 89 54 42 28 16 11 5 4 2 7 5 1 1 0 1 2 0 0 0
tg tg 5425 42.1 48 7.1e-01 11 -1.06 4 0 2 0 0 1 4 3 3 1 8 13 9 18 15 27 54 71 148 202 262 357 337 351 354 370 400 393 361 396 370 266 235 148 77 55 40 21 9 12 10 13 3 2 1 0 0 3 0 0
cc cc 10944 41.9 48 7.2e-01 11 -1.06 5 0 1 1 2 2 2 1 5 8 12 20 28 36 40 56 102 166 297 483 625 714 799 789 742 741 693 677 685 783 710 612 400 253 161 91 64 27 31 24 20 11 5 4 6 5 2 1 1 6
ac ac 6073 31.3 48 9.7e-01 16 -1.19 6 0 0 0 1 1 0 0 2 4 4 16 14 13 32 34 69 87 160 248 305 400 413 395 438 440 426 398 401 407 393 307 255 140 96 62 25 24 14 12 15 4 6 0 2 2 2 1 3 2
cg cg 14319 31.1 48 9.7e-01 16 -1.19 7 1 1 3 2 3 2 2 6 10 17 25 32 33 43 85 124 244 397 617 790 980 986 945 980 884 941 955 969 967 981 770 573 367 215 126 60 42 51 30 18 14 8 4 3 0 3 1 5 4
ga ga 6384 29.3 48 9.8e-01 16 -1.20 8 0 2 1 2 1 2 0 1 4 6 20 13 16 20 30 62 89 187 257 328 408 450 420 436 438 432 434 417 432 411 345 302 159 93 47 29 26 16 17 11 5 5 3 1 1 1 2 2 0
gt gt 6103 28.8 48 9.9e-01 16 -1.20 9 1 1 1 0 1 2 2 2 5 9 10 11 19 16 22 57 100 156 265 316 400 382 391 400 429 436 437 438 406 425 318 246 145 92 55 41 22 14 4 9 9 2 2 0 1 0 1 1 1
gc gc 11896 28.8 48 9.9e-01 16 -1.20 10 0 2 4 2 1 3 4 5 8 15 18 20 34 34 78 102 191 307 488 663 833 830 805 783 739 784 799 814 801 811 625 469 325 171 119 50 38 40 26 16 18 5 4 3 0 2 2 2 3
tc tc 6471 28.5 48 9.9e-01 16 -1.20 11 0 3 1 2 2 0 1 3 3 9 8 18 20 23 35 53 109 187 276 390 425 438 444 442 416 426 436 471 402 443 359 239 141 77 49 34 21 20 13 10 6 4 3 0 2 3 1 2 1
at at 1855 28.0 48 9.9e-01 16 -1.20 12 0 2 0 1 0 2 1 0 0 3 1 4 9 7 16 26 30 62 74 102 109 111 123 115 116 111 140 129 127 132 95 79 52 18 18 10 8 5 8 5 0 1 1 0 0 0 1 1 0
ct ct 4940 25.9 48 1.0e+00 16 -1.20 13 0 1 0 1 2 0 2 3 2 6 9 11 12 24 30 36 69 133 183 276 336 339 363 334 323 340 324 345 327 337 250 205 111 52 45 29 16 15 13 12 10 3 2 2 1 3 3 0 0
ag ag 4669 22.8 48 1.0e+00 16 -1.20 14 0 2 3 2 0 1 0 0 6 3 11 9 11 14 20 50 58 116 196 256 304 322 333 287 344 318 327 323 300 287 257 198 122 75 35 26 17 10 9 5 4 3 2 0 2 0 1 0 0
ta ta 1010 21.6 48 1.0e+00 16 -1.20 15 0 0 0 0 0 0 0 0 2 0 1 0 3 6 7 13 12 29 41 41 64 63 69 56 86 57 76 80 63 67 56 48 24 13 12 6 4 3 2 3 0 1 0 1 0 0 0 1 0
ca ca 5202 21.2 48 1.0e+00 16 -1.20 16 0 3 1 2 0 1 1 2 4 4 8 11 16 25 35 61 79 127 212 290 342 338 363 350 377 366 346 348 350 322 264 192 132 81 57 25 19 10 9 11 5 4 0 1 2 1 1 1 3 
 Host name	rsat
 Job started	2026-01-22.084324
 Job done	2026-01-22.084325
 Seconds	0.75
	user	0.75
	system	0.01
	cuser	0
;	csystem	0