/var/www/html/rsat/public_html/tmp/www-data/2026/01/22/peak-motifs.2026-01-22.084418_2026-01-22.084418_6mH0tk/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab 
 position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2026/01/22/peak-motifs.2026-01-22.084418_2026-01-22.084418_6mH0tk/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 2 -ci 20 -img_format png -title WT48h_constitutive -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2026/01/22/peak-motifs.2026-01-22.084418_2026-01-22.084418_6mH0tk/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Citation: van Helden, et al. (2000).  Nucleic Acids Res 28, 1000-1010.
 Sequence file                	$RSAT/public_html/tmp/www-data/2026/01/22/peak-motifs.2026-01-22.084418_2026-01-22.084418_6mH0tk/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta
 Sequence format              	fasta
 Sequence type                	dna
 Output file                  	$RSAT/public_html/tmp/www-data/2026/01/22/peak-motifs.2026-01-22.084418_2026-01-22.084418_6mH0tk/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Oligo length                 	2
 Occurrences counted  on a single  strands
 Conditions of applicability checked.
 Background model estimation: homogeneous repartition
 Sequence statistics:
	Nb of sequences              	574
	Sum of sequence lengths      	301682
	Min sequence length          	0
	Max sequence length          	1000
	Average sequence length      	525
	Possible positions           	301108
 Oligonucleotide statistics:
	Total occurrences    	299403
 Position interval parameters:
	Position interval    	20
	Number of windows    	50
	Total positions      	301108
	Degrees of freedom   	49
 K-mer clustering parameters:
	Number of clusters   	0
	Clustering method    	complete
 Position intervals:
	window	[min,max]	mid	seq	occ
	1	-25	[-499,-480]	-489.5	53	984
	2	-24	[-479,-460]	-469.5	58	1085
	3	-23	[-459,-440]	-449.5	68	1266
	4	-22	[-439,-420]	-429.5	76	1420
	5	-21	[-419,-400]	-409.5	82	1584
	6	-20	[-399,-380]	-389.5	95	1777
	7	-19	[-379,-360]	-369.5	114	2096
	8	-18	[-359,-340]	-349.5	127	2417
	9	-17	[-339,-320]	-329.5	153	2783
	10	-16	[-319,-300]	-309.5	180	3354
	11	-15	[-299,-280]	-289.5	209	3955
	12	-14	[-279,-260]	-269.5	243	4536
	13	-13	[-259,-240]	-249.5	270	5108
	14	-12	[-239,-220]	-229.5	313	5871
	15	-11	[-219,-200]	-209.5	355	6719
	16	-10	[-199,-180]	-189.5	409	7700
	17	-9	[-179,-160]	-169.5	467	8784
	18	-8	[-159,-140]	-149.5	521	9934
	19	-7	[-139,-120]	-129.5	566	10898
	20	-6	[-119,-100]	-109.5	574	11422
	21	-5	[-99,-80]	-89.5	574	11480
	22	-4	[-79,-60]	-69.5	574	11480
	23	-3	[-59,-40]	-49.5	574	11480
	24	-2	[-39,-20]	-29.5	574	11480
	25	-1	[-19,0]	-9.5	574	11480
	26	0	[1,20]	10.5	574	11480
	27	1	[21,40]	30.5	574	11480
	28	2	[41,60]	50.5	574	11480
	29	3	[61,80]	70.5	574	11480
	30	4	[81,100]	90.5	574	11480
	31	5	[101,120]	110.5	574	11406
	32	6	[121,140]	130.5	564	10810
	33	7	[141,160]	150.5	517	9820
	34	8	[161,180]	170.5	461	8675
	35	9	[181,200]	190.5	408	7601
	36	10	[201,220]	210.5	355	6631
	37	11	[221,240]	230.5	310	5794
	38	12	[241,260]	250.5	268	5055
	39	13	[261,280]	270.5	239	4471
	40	14	[281,300]	290.5	207	3898
	41	15	[301,320]	310.5	180	3301
	42	16	[321,340]	330.5	151	2733
	43	17	[341,360]	350.5	126	2394
	44	18	[361,380]	370.5	114	2055
	45	19	[381,400]	390.5	93	1752
	46	20	[401,420]	410.5	82	1570
	47	21	[421,440]	430.5	76	1405
	48	22	[441,460]	450.5	68	1240
	49	23	[461,480]	470.5	56	1077
	50	24	[481,500]	490.5	53	927

 Column headers
	1	seq            	pattern sequence
	2	id             	pattern identifier
	3	occ            	pattern occurrences
	4	chi2           	observed chi-square
	5	df             	degrees of freedom
	6	Pval           	P-value (probability for one word to be a false positive)
	7	Eval           	E-value; expected number of false positives (Eval = Pval * nb_tests)
	8	sig            	Significance (sig = -log10(Eval))
	9	rank           	rank of the pattern according to sorting criterion
	10	-489.5         	occurrences in window	1	[-499,-480]
	11	-469.5         	occurrences in window	2	[-479,-460]
	12	-449.5         	occurrences in window	3	[-459,-440]
	13	-429.5         	occurrences in window	4	[-439,-420]
	14	-409.5         	occurrences in window	5	[-419,-400]
	15	-389.5         	occurrences in window	6	[-399,-380]
	16	-369.5         	occurrences in window	7	[-379,-360]
	17	-349.5         	occurrences in window	8	[-359,-340]
	18	-329.5         	occurrences in window	9	[-339,-320]
	19	-309.5         	occurrences in window	10	[-319,-300]
	20	-289.5         	occurrences in window	11	[-299,-280]
	21	-269.5         	occurrences in window	12	[-279,-260]
	22	-249.5         	occurrences in window	13	[-259,-240]
	23	-229.5         	occurrences in window	14	[-239,-220]
	24	-209.5         	occurrences in window	15	[-219,-200]
	25	-189.5         	occurrences in window	16	[-199,-180]
	26	-169.5         	occurrences in window	17	[-179,-160]
	27	-149.5         	occurrences in window	18	[-159,-140]
	28	-129.5         	occurrences in window	19	[-139,-120]
	29	-109.5         	occurrences in window	20	[-119,-100]
	30	-89.5          	occurrences in window	21	[-99,-80]
	31	-69.5          	occurrences in window	22	[-79,-60]
	32	-49.5          	occurrences in window	23	[-59,-40]
	33	-29.5          	occurrences in window	24	[-39,-20]
	34	-9.5           	occurrences in window	25	[-19,0]
	35	10.5           	occurrences in window	26	[1,20]
	36	30.5           	occurrences in window	27	[21,40]
	37	50.5           	occurrences in window	28	[41,60]
	38	70.5           	occurrences in window	29	[61,80]
	39	90.5           	occurrences in window	30	[81,100]
	40	110.5          	occurrences in window	31	[101,120]
	41	130.5          	occurrences in window	32	[121,140]
	42	150.5          	occurrences in window	33	[141,160]
	43	170.5          	occurrences in window	34	[161,180]
	44	190.5          	occurrences in window	35	[181,200]
	45	210.5          	occurrences in window	36	[201,220]
	46	230.5          	occurrences in window	37	[221,240]
	47	250.5          	occurrences in window	38	[241,260]
	48	270.5          	occurrences in window	39	[261,280]
	49	290.5          	occurrences in window	40	[281,300]
	50	310.5          	occurrences in window	41	[301,320]
	51	330.5          	occurrences in window	42	[321,340]
	52	350.5          	occurrences in window	43	[341,360]
	53	370.5          	occurrences in window	44	[361,380]
	54	390.5          	occurrences in window	45	[381,400]
	55	410.5          	occurrences in window	46	[401,420]
	56	430.5          	occurrences in window	47	[421,440]
	57	450.5          	occurrences in window	48	[441,460]
	58	470.5          	occurrences in window	49	[461,480]
	59	490.5          	occurrences in window	50	[481,500]
seq id occ chi2 df Pval Eval sig rank -489.5 -469.5 -449.5 -429.5 -409.5 -389.5 -369.5 -349.5 -329.5 -309.5 -289.5 -269.5 -249.5 -229.5 -209.5 -189.5 -169.5 -149.5 -129.5 -109.5 -89.5 -69.5 -49.5 -29.5 -9.5 10.5 30.5 50.5 70.5 90.5 110.5 130.5 150.5 170.5 190.5 210.5 230.5 250.5 270.5 290.5 310.5 330.5 350.5 370.5 390.5 410.5 430.5 450.5 470.5 490.5
tt tt 5026 126.4 49 9.3e-09 1.5e-07 6.83 1 18 17 21 24 23 22 29 34 38 62 51 64 91 108 124 116 126 143 163 192 178 214 218 212 240 249 223 209 227 222 177 167 151 120 106 113 82 63 53 63 52 32 34 22 41 33 17 15 13 14
aa aa 4989 78.0 49 5.2e-03 0.084 1.08 2 19 17 21 27 23 30 39 40 40 40 57 81 84 85 108 112 121 136 194 187 185 211 235 223 220 227 216 192 194 165 186 185 148 121 119 90 102 85 75 53 52 49 45 35 30 24 13 18 15 15
cc cc 33527 66.2 49 5.1e-02 0.82 0.09 3 116 120 128 164 174 215 229 281 304 386 459 510 610 627 713 867 1029 1120 1244 1318 1349 1289 1309 1275 1197 1312 1223 1254 1236 1272 1278 1182 1034 933 930 809 627 548 472 402 343 270 259 235 191 186 151 148 109 90
gg gg 32897 61.6 49 1.1e-01 1.7 -0.24 4 97 120 143 153 179 172 255 236 290 358 456 498 535 684 807 828 990 1088 1185 1229 1214 1275 1268 1176 1200 1226 1245 1274 1227 1270 1240 1220 1041 1013 825 705 639 566 505 454 376 314 243 250 196 146 162 131 116 77
at at 5379 61.3 49 1.1e-01 1.8 -0.25 5 19 19 30 29 34 26 33 37 69 72 64 81 88 95 123 147 169 186 179 218 208 205 188 214 211 184 176 209 206 210 206 231 175 155 134 110 67 88 89 73 48 51 36 33 30 30 32 19 21 22
tc tc 19211 55.3 49 2.5e-01 4 -0.60 6 62 76 79 83 105 122 135 147 205 227 215 275 358 384 410 513 565 654 704 752 734 721 717 743 757 670 711 681 723 716 720 683 638 597 494 438 364 337 303 269 199 165 135 108 105 116 93 63 71 69
ct ct 14801 51.3 49 3.8e-01 6.1 -0.79 7 55 47 49 72 66 92 86 105 149 174 174 226 280 307 312 381 433 502 559 548 552 572 551 563 577 566 513 549 578 565 549 518 480 438 375 347 277 245 213 209 186 139 119 83 92 84 70 52 56 66
ac ac 18048 46.5 49 5.8e-01 9.2 -0.96 8 48 67 70 64 91 114 123 153 156 185 227 290 320 338 389 473 507 587 653 659 664 690 723 695 702 709 732 679 709 667 704 591 598 497 440 403 372 308 277 214 198 156 164 137 100 105 77 85 74 64
ta ta 2951 45.5 49 6.2e-01 9.8 -0.99 9 8 9 10 12 13 15 15 16 23 36 34 47 51 51 75 62 75 102 109 110 107 112 107 121 126 115 104 127 129 105 117 115 107 83 70 66 52 51 31 32 36 29 24 22 13 12 15 15 20 15
gc gc 36908 42.4 49 7.3e-01 12 -1.07 10 134 117 160 180 213 210 263 309 329 401 533 562 590 728 819 951 1104 1254 1326 1351 1426 1423 1361 1352 1362 1404 1349 1427 1377 1456 1425 1274 1197 1073 957 806 734 606 549 465 426 363 311 270 229 180 184 154 129 105
tg tg 15518 38.9 49 8.5e-01 14 -1.13 11 61 60 69 89 73 82 104 132 161 172 210 243 246 297 343 393 449 485 560 547 582 548 572 607 630 608 597 608 609 608 572 589 508 449 379 342 268 249 223 222 185 148 128 96 95 72 76 65 58 49
gt gt 17513 37.6 49 8.8e-01 14 -1.15 12 61 79 77 86 86 105 136 147 169 197 213 257 287 327 404 443 477 554 640 663 643 612 659 693 723 653 704 672 685 642 648 661 596 522 437 381 346 300 251 241 189 158 128 109 93 84 83 72 68 52
ca ca 15465 37.2 49 8.9e-01 14 -1.15 13 60 60 61 65 96 97 113 136 142 174 196 236 288 282 357 417 462 512 540 554 586 607 589 594 585 587 614 582 572 603 588 512 501 418 378 342 322 269 235 175 180 134 120 97 99 81 60 75 60 52
ag ag 14094 33.2 49 9.6e-01 15 -1.19 14 45 50 53 71 80 84 98 117 124 154 203 194 235 273 323 347 409 487 495 568 553 554 507 552 498 532 577 534 527 532 508 528 488 382 332 303 293 241 200 165 166 136 112 94 83 73 57 63 48 46
ga ga 19126 29.0 49 9.9e-01 16 -1.20 15 47 67 78 94 90 114 125 158 180 210 252 290 296 372 423 477 553 640 689 774 745 714 724 748 705 720 765 717 742 701 712 724 645 543 465 403 356 325 290 255 196 179 166 139 106 112 93 80 62 65
cg cg 43950 25.9 49 1.0e+00 16 -1.20 16 134 153 197 191 238 277 313 369 392 486 591 659 709 872 946 1133 1288 1463 1604 1669 1665 1653 1673 1624 1660 1638 1665 1679 1639 1667 1701 1549 1440 1302 1140 953 876 742 674 586 464 410 370 325 249 232 222 185 157 126 
 Host name	rsat
 Job started	2026-01-22.084423
 Job done	2026-01-22.084425
 Seconds	2.13
	user	2.13
	system	0.01
	cuser	0
;	csystem	0