/var/www/html/rsat/public_html/tmp/www-data/2026/01/22/peak-motifs.2026-01-22.161809_2026-01-22.161809_qNN5KW/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab 
 position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2026/01/22/peak-motifs.2026-01-22.161809_2026-01-22.161809_qNN5KW/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 2 -ci 20 -img_format png -title MYB67 -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2026/01/22/peak-motifs.2026-01-22.161809_2026-01-22.161809_qNN5KW/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Citation: van Helden, et al. (2000).  Nucleic Acids Res 28, 1000-1010.
 Sequence file                	$RSAT/public_html/tmp/www-data/2026/01/22/peak-motifs.2026-01-22.161809_2026-01-22.161809_qNN5KW/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta
 Sequence format              	fasta
 Sequence type                	dna
 Output file                  	$RSAT/public_html/tmp/www-data/2026/01/22/peak-motifs.2026-01-22.161809_2026-01-22.161809_qNN5KW/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Oligo length                 	2
 Occurrences counted  on a single  strands
 Conditions of applicability checked.
 Background model estimation: homogeneous repartition
 Sequence statistics:
	Nb of sequences              	1736
	Sum of sequence lengths      	499090
	Min sequence length          	0
	Max sequence length          	1000
	Average sequence length      	287
	Possible positions           	497354
 Oligonucleotide statistics:
	Total occurrences    	478944
 Position interval parameters:
	Position interval    	20
	Number of windows    	50
	Total positions      	497354
	Degrees of freedom   	49
 K-mer clustering parameters:
	Number of clusters   	0
	Clustering method    	complete
 Position intervals:
	window	[min,max]	mid	seq	occ
	1	-25	[-499,-480]	-489.5	1	20
	2	-24	[-479,-460]	-469.5	2	40
	3	-23	[-459,-440]	-449.5	2	40
	4	-22	[-439,-420]	-429.5	3	42
	5	-21	[-419,-400]	-409.5	3	60
	6	-20	[-399,-380]	-389.5	6	82
	7	-19	[-379,-360]	-369.5	9	147
	8	-18	[-359,-340]	-349.5	10	184
	9	-17	[-339,-320]	-329.5	13	219
	10	-16	[-319,-300]	-309.5	24	360
	11	-15	[-299,-280]	-289.5	32	545
	12	-14	[-279,-260]	-269.5	47	771
	13	-13	[-259,-240]	-249.5	71	1148
	14	-12	[-239,-220]	-229.5	108	1817
	15	-11	[-219,-200]	-209.5	177	2765
	16	-10	[-199,-180]	-189.5	256	4317
	17	-9	[-179,-160]	-169.5	433	6859
	18	-8	[-159,-140]	-149.5	727	11475
	19	-7	[-139,-120]	-129.5	1120	18697
	20	-6	[-119,-100]	-109.5	1596	27423
	21	-5	[-99,-80]	-89.5	1736	34523
	22	-4	[-79,-60]	-69.5	1736	34720
	23	-3	[-59,-40]	-49.5	1736	34720
	24	-2	[-39,-20]	-29.5	1736	34720
	25	-1	[-19,0]	-9.5	1736	34720
	26	0	[1,20]	10.5	1736	34720
	27	1	[21,40]	30.5	1736	34720
	28	2	[41,60]	50.5	1736	34720
	29	3	[61,80]	70.5	1736	34720
	30	4	[81,100]	90.5	1736	34232
	31	5	[101,120]	110.5	1560	26452
	32	6	[121,140]	130.5	1084	17929
	33	7	[141,160]	150.5	703	10882
	34	8	[161,180]	170.5	418	6515
	35	9	[181,200]	190.5	245	4154
	36	10	[201,220]	210.5	169	2632
	37	11	[221,240]	230.5	106	1749
	38	12	[241,260]	250.5	67	1101
	39	13	[261,280]	270.5	46	739
	40	14	[281,300]	290.5	32	529
	41	15	[301,320]	310.5	22	336
	42	16	[321,340]	330.5	13	214
	43	17	[341,360]	350.5	10	181
	44	18	[361,380]	370.5	9	142
	45	19	[381,400]	390.5	6	77
	46	20	[401,420]	410.5	3	59
	47	21	[421,440]	430.5	2	40
	48	22	[441,460]	450.5	2	40
	49	23	[461,480]	470.5	2	38
	50	24	[481,500]	490.5	1	19

 Column headers
	1	seq            	pattern sequence
	2	id             	pattern identifier
	3	occ            	pattern occurrences
	4	chi2           	observed chi-square
	5	df             	degrees of freedom
	6	Pval           	P-value (probability for one word to be a false positive)
	7	Eval           	E-value; expected number of false positives (Eval = Pval * nb_tests)
	8	sig            	Significance (sig = -log10(Eval))
	9	rank           	rank of the pattern according to sorting criterion
	10	-489.5         	occurrences in window	1	[-499,-480]
	11	-469.5         	occurrences in window	2	[-479,-460]
	12	-449.5         	occurrences in window	3	[-459,-440]
	13	-429.5         	occurrences in window	4	[-439,-420]
	14	-409.5         	occurrences in window	5	[-419,-400]
	15	-389.5         	occurrences in window	6	[-399,-380]
	16	-369.5         	occurrences in window	7	[-379,-360]
	17	-349.5         	occurrences in window	8	[-359,-340]
	18	-329.5         	occurrences in window	9	[-339,-320]
	19	-309.5         	occurrences in window	10	[-319,-300]
	20	-289.5         	occurrences in window	11	[-299,-280]
	21	-269.5         	occurrences in window	12	[-279,-260]
	22	-249.5         	occurrences in window	13	[-259,-240]
	23	-229.5         	occurrences in window	14	[-239,-220]
	24	-209.5         	occurrences in window	15	[-219,-200]
	25	-189.5         	occurrences in window	16	[-199,-180]
	26	-169.5         	occurrences in window	17	[-179,-160]
	27	-149.5         	occurrences in window	18	[-159,-140]
	28	-129.5         	occurrences in window	19	[-139,-120]
	29	-109.5         	occurrences in window	20	[-119,-100]
	30	-89.5          	occurrences in window	21	[-99,-80]
	31	-69.5          	occurrences in window	22	[-79,-60]
	32	-49.5          	occurrences in window	23	[-59,-40]
	33	-29.5          	occurrences in window	24	[-39,-20]
	34	-9.5           	occurrences in window	25	[-19,0]
	35	10.5           	occurrences in window	26	[1,20]
	36	30.5           	occurrences in window	27	[21,40]
	37	50.5           	occurrences in window	28	[41,60]
	38	70.5           	occurrences in window	29	[61,80]
	39	90.5           	occurrences in window	30	[81,100]
	40	110.5          	occurrences in window	31	[101,120]
	41	130.5          	occurrences in window	32	[121,140]
	42	150.5          	occurrences in window	33	[141,160]
	43	170.5          	occurrences in window	34	[161,180]
	44	190.5          	occurrences in window	35	[181,200]
	45	210.5          	occurrences in window	36	[201,220]
	46	230.5          	occurrences in window	37	[221,240]
	47	250.5          	occurrences in window	38	[241,260]
	48	270.5          	occurrences in window	39	[261,280]
	49	290.5          	occurrences in window	40	[281,300]
	50	310.5          	occurrences in window	41	[301,320]
	51	330.5          	occurrences in window	42	[321,340]
	52	350.5          	occurrences in window	43	[341,360]
	53	370.5          	occurrences in window	44	[361,380]
	54	390.5          	occurrences in window	45	[381,400]
	55	410.5          	occurrences in window	46	[401,420]
	56	430.5          	occurrences in window	47	[421,440]
	57	450.5          	occurrences in window	48	[441,460]
	58	470.5          	occurrences in window	49	[461,480]
	59	490.5          	occurrences in window	50	[481,500]
seq id occ chi2 df Pval Eval sig rank -489.5 -469.5 -449.5 -429.5 -409.5 -389.5 -369.5 -349.5 -329.5 -309.5 -289.5 -269.5 -249.5 -229.5 -209.5 -189.5 -169.5 -149.5 -129.5 -109.5 -89.5 -69.5 -49.5 -29.5 -9.5 10.5 30.5 50.5 70.5 90.5 110.5 130.5 150.5 170.5 190.5 210.5 230.5 250.5 270.5 290.5 310.5 330.5 350.5 370.5 390.5 410.5 430.5 450.5 470.5 490.5
cc cc 17427 248.1 49 2.1e-28 3.3e-27 26.48 1 0 2 3 1 1 2 4 5 3 10 12 29 33 50 69 150 169 357 529 840 1160 1161 1276 1396 1441 1469 1302 1250 1207 1150 829 574 344 219 131 87 58 33 23 12 10 10 9 2 0 2 1 1 1 0
gg gg 18124 183.1 49 2.3e-17 3.7e-16 15.43 2 3 4 4 3 7 4 12 8 13 27 41 28 51 79 108 145 285 352 596 917 1204 1222 1243 1389 1423 1398 1369 1284 1223 1210 896 589 380 224 125 76 58 28 35 20 12 8 1 8 3 0 0 3 2 4
ac ac 27794 109.9 49 1.4e-06 2.3e-05 4.64 3 0 3 1 3 0 3 8 8 5 13 25 48 54 97 142 247 339 628 1058 1409 1826 1859 1996 2067 2143 2114 2018 1993 1870 1802 1471 926 604 340 252 154 95 61 37 22 17 10 10 5 2 1 1 1 6 0
at at 44114 109.8 49 1.5e-06 2.4e-05 4.63 4 2 0 1 4 3 11 6 12 18 30 55 59 116 148 258 388 633 1092 1749 2544 3186 3138 3044 2896 2870 2915 2970 2979 3036 3131 2497 1660 1017 601 371 228 163 100 65 46 27 10 14 10 3 1 3 3 1 0
aa aa 56457 109.4 49 1.7e-06 2.7e-05 4.57 5 0 1 2 0 5 6 13 23 31 38 48 89 115 239 344 542 803 1317 2263 3203 4081 4068 4011 3834 3678 3831 3902 3835 3911 3799 3023 2079 1263 750 486 300 206 116 59 63 26 18 13 5 4 2 4 3 5 0
ga ga 26922 102.1 49 1.3e-05 0.00021 3.67 6 2 2 2 5 5 10 9 14 11 26 25 40 67 105 147 248 434 661 1100 1627 1957 1957 1863 1778 1697 1708 1938 1844 1847 1865 1485 938 569 329 221 130 87 56 35 26 15 7 7 9 2 3 1 1 4 3
tc tc 26225 95.3 49 8.3e-05 0.0013 2.88 7 0 1 4 5 2 3 6 8 10 15 18 35 68 91 144 194 338 565 1004 1493 1895 1835 1771 1767 1696 1745 1691 1864 1946 1921 1428 1010 630 358 231 154 103 62 54 22 14 7 3 9 1 1 0 3 0 0
tt tt 57565 93.5 49 1.3e-04 0.0021 2.68 8 3 3 3 4 10 7 15 25 30 41 58 102 170 201 342 501 852 1432 2155 3182 3938 3913 3939 3903 3986 3791 3958 3943 4180 4143 3016 2202 1297 766 494 316 213 134 91 73 50 25 11 17 9 3 6 9 2 1
gt gt 28218 74.3 49 1.1e-02 0.18 0.74 9 3 7 3 2 3 4 14 9 19 27 49 51 58 108 158 236 396 629 979 1496 1829 1946 1995 2054 2086 2070 2002 2020 1945 1958 1447 992 587 379 206 144 99 65 48 33 23 13 9 2 5 1 0 3 3 3
ag ag 26163 73.2 49 1.4e-02 0.23 0.64 10 1 2 3 2 7 6 9 19 14 28 28 36 59 108 158 246 405 587 1006 1518 1943 1915 1873 1800 1706 1700 1813 1815 1814 1787 1400 908 514 346 195 134 85 53 37 29 14 11 11 8 2 2 0 2 1 3
ca ca 30496 66.4 49 4.9e-02 0.79 0.10 11 0 2 2 4 3 5 7 12 10 17 28 47 68 105 153 256 365 660 1120 1622 2163 2127 2181 2241 2258 2274 2099 2106 2066 2061 1606 1059 658 361 268 177 110 66 47 30 13 10 19 5 0 0 1 3 1 0
tg tg 31403 65.9 49 5.4e-02 0.86 0.07 12 3 6 3 3 6 7 15 9 17 33 59 61 69 123 154 263 465 748 1124 1792 2110 2201 2160 2250 2246 2230 2244 2140 2198 2174 1658 1050 665 393 244 153 102 66 48 39 26 12 10 5 7 2 1 2 4 3
gc gc 11981 40.3 49 8.1e-01 13 -1.11 13 1 2 2 1 4 4 8 7 8 9 19 22 19 45 62 110 167 275 442 697 882 893 854 861 813 791 777 835 846 841 614 419 225 146 104 56 39 28 11 16 4 6 8 4 1 0 0 1 1 1
cg cg 9619 39.7 49 8.3e-01 13 -1.12 14 1 2 2 2 1 4 5 4 4 4 7 12 20 32 49 91 136 234 405 541 635 653 659 708 621 648 633 706 654 707 492 387 214 121 88 50 27 24 11 6 3 5 2 3 1 0 0 2 3 0
ct ct 25966 38.6 49 8.6e-01 14 -1.14 15 0 1 4 3 2 1 9 9 8 15 24 44 58 92 136 213 346 591 986 1435 1810 1822 1761 1735 1772 1768 1746 1865 1936 1840 1413 915 603 352 229 145 102 59 45 27 15 9 3 9 3 2 0 0 2 1
ta ta 40470 36.4 49 9.1e-01 15 -1.16 16 1 2 1 0 1 5 7 12 18 27 49 58 98 142 246 367 569 975 1563 2190 2836 2830 2841 2714 2802 2738 2777 2832 2778 2795 2267 1505 905 569 326 219 142 90 57 45 28 13 11 9 3 1 2 2 2 0 
 Host name	rsat
 Job started	2026-01-22.161816
 Job done	2026-01-22.161818
 Seconds	2.84
	user	2.84
	system	0.02
	cuser	0
;	csystem	0