One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2026/01/25/peak-motifs.2026-01-25.181000_2026-01-25.181000_CpuIe4/results/discovered_motifs/peak-motifs_motifs_discovered.tf -format2 tf -file2 $RSAT/public_html/motif_databases/DMMPMM_drosophila/dmmpmm_PCM.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2026/01/25/peak-motifs.2026-01-25.181000_2026-01-25.181000_CpuIe4/results/discovered_vs_db/peak-motifs_motifs_vs_db_DMMPMM_drosophila.tab

One-to-n matrix alignment; reference matrix: positions_6-8nt_m1_shift2 ; 5 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
positions_6-8nt_m1_shift2 (positions_6-8nt_m1)
; positions_6-8nt_m1; m=0 (reference); ncol1=10; shift=2; ncol=12; --aaAAAAAAaa ; Alignment reference a 0 0 994 1074 2374 2362 2364 2367 2365 2374 1073 1061 c 0 0 497 454 0 0 0 0 0 0 384 419 g 0 0 434 419 0 0 0 0 0 0 382 393 t 0 0 449 427 0 12 10 7 9 0 535 501

hb_shift2 (hb)
; positions_6-8nt_m1 versus hb; m=1/4; ncol2=9; w=0; offset=0; strand=D; shift=2; score=0.733313; --mayAAAAAa- ; cor=; Ncor= a 0 0 30.2913 47.4563 1.00971 96.932 101.981 104 97.9417 102.99 68.6602 0 c 0 0 49.4757 16.1553 29.2816 1.00971 1.00971 0 1.00971 1.00971 8.07767 0 g 0 0 21.2039 17.165 11.1068 4.03883 0 0 4.03883 0 12.1165 0 t 0 0 3.02913 23.2233 62.6019 2.01942 1.00971 0 1.00971 0 15.1456 0

zen_shift4 (zen)
; positions_6-8nt_m1 versus zen; m=2/4; ncol2=6; w=0; offset=2; strand=D; shift=4; score=0.448429; ----AATwAA-- ; cor=; Ncor= a 0 0 0 0 11.9167 11.9167 0 8.66667 13 13 0 0 c 0 0 0 0 0.541667 0 1.08333 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0.541667 1.08333 11.9167 4.33333 0 0 0 0

cad_rc_shift0 (cad_rc)
; positions_6-8nt_m1 versus cad_rc; m=3/4; ncol2=9; w=-2; offset=-2; strand=R; shift=0; score=0.416893; WrtYrwAAA--- ; cor=; Ncor= a 9 8 1 0 7 4 12 11 11 0 0 0 c 0 1 3 9 1 2 0 2 0 0 0 0 g 0 4 3 0 5 1 1 0 0 0 0 0 t 4 0 6 4 0 6 0 0 2 0 0 0

gt_shift1 (gt)
; positions_6-8nt_m1 versus gt; m=4/4; ncol2=7; w=-1; offset=-1; strand=D; shift=1; score=0.409894; -GTmAwAW---- ; cor=; Ncor= a 0 0 1 5 8 3 8 6 0 0 0 0 c 0 1 1 3 0 0 0 0 0 0 0 0 g 0 7 0 0 0 0 0 0 0 0 0 0 t 0 0 6 0 0 5 0 2 0 0 0 0

One-to-n matrix alignment; reference matrix: oligos_6-8nt_m8_shift1 ; 2 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6-8nt_m8_shift1 (oligos_6-8nt_m8)
; oligos_6-8nt_m8; m=0 (reference); ncol1=11; shift=1; ncol=12; -cbCTCTCCCtc ; Alignment reference a 0 771 701 108 155 94 158 79 156 194 1015 646 c 0 1663 1103 3887 116 3844 138 3643 3109 3671 904 1769 g 0 795 1185 74 218 132 245 288 360 206 912 914 t 0 999 1239 159 3739 158 3687 218 603 157 1397 899

Trl_shift0 (Trl)
; oligos_6-8nt_m8 versus Trl; m=1/1; ncol2=13; w=-1; offset=-1; strand=D; shift=0; score=0.652055; TtkykCTCtCtc ; cor=; Ncor= a 10 15 4 0 7 0 4 2 6 13 9 4 c 10 8 19 41 3 72 0 56 12 56 16 47 g 0 13 24 10 27 5 11 8 9 1 6 9 t 57 41 30 26 40 0 62 11 50 7 46 17

One-to-n matrix alignment; reference matrix: oligos_6-8nt_m9_shift1 ; 3 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6-8nt_m9_shift1 (oligos_6-8nt_m9)
; oligos_6-8nt_m9; m=0 (reference); ncol1=11; shift=1; ncol=12; -ctCCCTCTCyc ; Alignment reference a 0 663 699 92 206 224 211 67 97 58 630 753 c 0 1705 928 3668 2848 3367 155 3713 116 3769 1224 1621 g 0 830 1002 125 388 197 240 107 155 103 915 822 t 0 847 1416 160 603 257 3439 158 3677 115 1276 849

Trl_shift0 (Trl)
; oligos_6-8nt_m9 versus Trl; m=1/2; ncol2=13; w=-1; offset=-1; strand=D; shift=0; score=0.650596; TtkykCTCtCtc ; cor=; Ncor= a 10 15 4 0 7 0 4 2 6 13 9 4 c 10 8 19 41 3 72 0 56 12 56 16 47 g 0 13 24 10 27 5 11 8 9 1 6 9 t 57 41 30 26 40 0 62 11 50 7 46 17

z_rc_shift5 (z_rc)
; oligos_6-8nt_m9 versus z_rc; m=2/2; ncol2=6; w=0; offset=4; strand=R; shift=5; score=0.426975; -----CaCTCA- ; cor=; Ncor= a 0 0 0 0 0 5.12195 24.5854 0 0 0 29.7073 0 c 0 0 0 0 0 30.7317 0 42 0 42 3.07317 0 g 0 0 0 0 0 5.12195 10.2439 0 0 0 7.17073 0 t 0 0 0 0 0 1.02439 7.17073 0 42 0 2.04878 0

One-to-n matrix alignment; reference matrix: oligos_6-8nt_m10_shift0 ; 3 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6-8nt_m10_shift0 (oligos_6-8nt_m10)
; oligos_6-8nt_m10; m=0 (reference); ncol1=10; shift=0; ncol=10; smCAAGGAgm ; Alignment reference a 257 283 0 1090 1115 0 0 1114 212 318 c 298 337 1103 1 1 0 0 0 223 316 g 316 253 1 7 2 1118 1112 3 419 279 t 247 245 14 20 0 0 6 1 264 205

ttk_rc_shift3 (ttk_rc)
; oligos_6-8nt_m10 versus ttk_rc; m=1/2; ncol2=7; w=0; offset=3; strand=R; shift=3; score=0.568452; ---mAGGAym ; cor=; Ncor= a 0 0 0 3.375 7.875 0 0 9 0 3.375 c 0 0 0 5.625 0 0 0 0 5.625 5.625 g 0 0 0 0 1.125 9 9 0 0 0 t 0 0 0 0 0 0 0 0 3.375 0

Eip74EF_shift3 (Eip74EF)
; oligos_6-8nt_m10 versus Eip74EF; m=2/2; ncol2=8; w=0; offset=3; strand=D; shift=3; score=0.451607; ---mMGGAAk ; cor=; Ncor= a 0 0 0 3 6 1 0 8 8 1 c 0 0 0 5 2 0 1 0 0 0 g 0 0 0 0 0 7 7 0 0 5 t 0 0 0 0 0 0 0 0 0 2

One-to-n matrix alignment; reference matrix: dyads_m10_shift0 ; 7 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
dyads_m10_shift0 (dyads_m10)
; dyads_m10; m=0 (reference); ncol1=12; shift=0; ncol=12; wwATAAATAAww ; Alignment reference a 747 726 1680 198 1754 1628 1767 109 1714 1534 805 669 c 344 353 47 86 47 52 40 116 50 93 295 349 g 319 252 81 53 34 45 25 54 56 60 284 257 t 486 565 88 1559 61 171 64 1617 76 209 512 621

hb_shift1 (hb)
; dyads_m10 versus hb; m=1/6; ncol2=9; w=0; offset=1; strand=D; shift=1; score=0.559162; -mayAAAAAa-- ; cor=; Ncor= a 0 30.2913 47.4563 1.00971 96.932 101.981 104 97.9417 102.99 68.6602 0 0 c 0 49.4757 16.1553 29.2816 1.00971 1.00971 0 1.00971 1.00971 8.07767 0 0 g 0 21.2039 17.165 11.1068 4.03883 0 0 4.03883 0 12.1165 0 0 t 0 3.02913 23.2233 62.6019 2.01942 1.00971 0 1.00971 0 15.1456 0 0

br-Z4_rc_shift3 (br-Z4_rc)
; dyads_m10 versus br-Z4_rc; m=2/6; ncol2=8; w=0; offset=3; strand=R; shift=3; score=0.518922; ---TAAhYAdT- ; cor=; Ncor= a 0 0 0 1 7 8 2 0 8 3 1 0 c 0 0 0 0 0 0 3 2 0 0 0 0 g 0 0 0 0 0 0 0 0 0 2 0 0 t 0 0 0 7 1 0 3 6 0 3 7 0

Antp_shift5 (Antp)
; dyads_m10 versus Antp; m=3/6; ncol2=6; w=0; offset=5; strand=D; shift=5; score=0.469787; -----mATAAw- ; cor=; Ncor= a 0 0 0 0 0 10.5 18 0 16.5 18 7.5 0 c 0 0 0 0 0 4.5 0 0 0 0 0 0 g 0 0 0 0 0 3 0 0 1.5 0 0 0 t 0 0 0 0 0 0 0 18 0 0 10.5 0

zen_shift1 (zen)
; dyads_m10 versus zen; m=4/6; ncol2=6; w=0; offset=1; strand=D; shift=1; score=0.455986; -AATwAA----- ; cor=; Ncor= a 0 11.9167 11.9167 0 8.66667 13 13 0 0 0 0 0 c 0 0.541667 0 1.08333 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0.541667 1.08333 11.9167 4.33333 0 0 0 0 0 0 0

ap_shift5 (ap)
; dyads_m10 versus ap; m=5/6; ncol2=6; w=0; offset=5; strand=D; shift=5; score=0.437673; -----AAThAt- ; cor=; Ncor= a 0 0 0 0 0 14 14 0 5 13 2 0 c 0 0 0 0 0 0 0 1 4 0 1 0 g 0 0 0 0 0 0 0 1 1 1 3 0 t 0 0 0 0 0 0 0 12 4 0 8 0

abd-A_shift6 (abd-A)
; dyads_m10 versus abd-A; m=6/6; ncol2=6; w=0; offset=6; strand=D; shift=6; score=0.42487; ------aTAAWT ; cor=; Ncor= a 0 0 0 0 0 0 27.439 0 40.6098 40.6098 14.2683 0 c 0 0 0 0 0 0 5.4878 3.29268 1.09756 0 0 3.29268 g 0 0 0 0 0 0 4.39024 1.09756 3.29268 0 0 6.58537 t 0 0 0 0 0 0 7.68293 40.6098 0 4.39024 30.7317 35.122

One-to-n matrix alignment; reference matrix: oligos_6-8nt_m6_shift0 ; 2 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6-8nt_m6_shift0 (oligos_6-8nt_m6)
; oligos_6-8nt_m6; m=0 (reference); ncol1=10; shift=0; ncol=10; gyACTCAChc ; Alignment reference a 224 199 938 0 3 69 906 0 253 218 c 227 295 0 935 11 766 19 923 289 299 g 263 118 0 3 0 3 3 4 140 192 t 224 326 0 0 924 100 10 11 256 229

z_rc_shift1 (z_rc)
; oligos_6-8nt_m6 versus z_rc; m=1/1; ncol2=6; w=0; offset=1; strand=R; shift=1; score=0.535301; -CaCTCA--- ; cor=; Ncor= a 0 5.12195 24.5854 0 0 0 29.7073 0 0 0 c 0 30.7317 0 42 0 42 3.07317 0 0 0 g 0 5.12195 10.2439 0 0 0 7.17073 0 0 0 t 0 1.02439 7.17073 0 42 0 2.04878 0 0 0

One-to-n matrix alignment; reference matrix: oligos_6-8nt_m1_shift0 ; 2 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6-8nt_m1_shift0 (oligos_6-8nt_m1)
; oligos_6-8nt_m1; m=0 (reference); ncol1=13; shift=0; ncol=13; aartAAACAAAwa ; Alignment reference a 874 702 601 515 2215 2096 2225 61 2126 2128 2119 769 823 c 472 561 318 319 47 92 71 2039 74 102 90 512 538 g 479 560 1116 266 41 72 36 70 102 65 70 433 460 t 563 565 353 1288 85 128 56 218 86 93 109 674 567

hb_shift1 (hb)
; oligos_6-8nt_m1 versus hb; m=1/1; ncol2=9; w=0; offset=1; strand=D; shift=1; score=0.512827; -mayAAAAAa--- ; cor=; Ncor= a 0 30.2913 47.4563 1.00971 96.932 101.981 104 97.9417 102.99 68.6602 0 0 0 c 0 49.4757 16.1553 29.2816 1.00971 1.00971 0 1.00971 1.00971 8.07767 0 0 0 g 0 21.2039 17.165 11.1068 4.03883 0 0 4.03883 0 12.1165 0 0 0 t 0 3.02913 23.2233 62.6019 2.01942 1.00971 0 1.00971 0 15.1456 0 0 0

One-to-n matrix alignment; reference matrix: dyads_m8_shift0 ; 2 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
dyads_m8_shift0 (dyads_m8)
; dyads_m8; m=0 (reference); ncol1=14; shift=0; ncol=14; aaAAAAaaAAAAaa ; Alignment reference a 1899 2016 4485 4686 4719 4562 2114 2094 4517 4701 4638 4429 2025 2008 c 1094 1124 243 175 173 200 1052 1157 234 157 199 252 1002 1057 g 1067 1059 234 141 99 155 912 992 219 140 146 202 963 977 t 1101 962 199 159 170 244 1083 918 191 163 178 278 1171 1119

hb_shift5 (hb)
; dyads_m8 versus hb; m=1/1; ncol2=9; w=0; offset=5; strand=D; shift=5; score=0.50691; -----mayAAAAAa ; cor=; Ncor= a 0 0 0 0 0 30.2913 47.4563 1.00971 96.932 101.981 104 97.9417 102.99 68.6602 c 0 0 0 0 0 49.4757 16.1553 29.2816 1.00971 1.00971 0 1.00971 1.00971 8.07767 g 0 0 0 0 0 21.2039 17.165 11.1068 4.03883 0 0 4.03883 0 12.1165 t 0 0 0 0 0 3.02913 23.2233 62.6019 2.01942 1.00971 0 1.00971 0 15.1456

One-to-n matrix alignment; reference matrix: dyads_m5_shift0 ; 3 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
dyads_m5_shift0 (dyads_m5)
; dyads_m5; m=0 (reference); ncol1=11; shift=0; ncol=11; ycGCCGCCGcc ; Alignment reference a 1024 909 274 229 115 379 237 117 206 1236 982 c 1634 1767 191 4280 4573 104 4199 4626 242 1428 1816 g 1052 1179 4138 182 149 4234 287 93 4299 1198 983 t 1251 1106 358 270 124 244 238 125 214 1099 1180

Med_shift2 (Med)
; dyads_m5 versus Med; m=1/2; ncol2=11; w=0; offset=2; strand=D; shift=2; score=0.487707; --sCmssCsmm ; cor=; Ncor= a 0 0 1 0 5 0 0 0 0 3 4 c 0 0 2 8 3 3 4 7 3 5 4 g 0 0 5 0 0 4 4 1 5 0 0 t 0 0 0 0 0 1 0 0 0 0 0

brk_shift2 (brk)
; dyads_m5 versus brk; m=2/2; ncol2=7; w=0; offset=2; strand=D; shift=2; score=0.465891; --rGCGCCr-- ; cor=; Ncor= a 0 0 4.4 2.2 0 0 0 0 5.5 0 0 c 0 0 0 0 9.9 0 11 11 0 0 0 g 0 0 6.6 8.8 0 9.9 0 0 5.5 0 0 t 0 0 0 0 1.1 1.1 0 0 0 0 0

One-to-n matrix alignment; reference matrix: positions_6-8nt_m2_shift0 ; 2 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
positions_6-8nt_m2_shift0 (positions_6-8nt_m2)
; positions_6-8nt_m2; m=0 (reference); ncol1=10; shift=0; ncol=10; krGAGGGAda ; Alignment reference a 150 203 5 633 0 1 0 626 167 221 c 135 152 2 0 3 0 0 0 110 131 g 192 161 599 7 641 641 594 5 206 151 t 167 128 38 4 0 2 50 13 161 141

z_shift1 (z)
; positions_6-8nt_m2 versus z; m=1/1; ncol2=6; w=0; offset=1; strand=D; shift=1; score=0.429498; -TGAGtG--- ; cor=; Ncor= a 0 2.04878 0 42 0 7.17073 1.02439 0 0 0 c 0 7.17073 0 0 0 10.2439 5.12195 0 0 0 g 0 3.07317 42 0 42 0 30.7317 0 0 0 t 0 29.7073 0 0 0 24.5854 5.12195 0 0 0

One-to-n matrix alignment; reference matrix: oligos_6-8nt_m3_shift0 ; 2 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6-8nt_m3_shift0 (oligos_6-8nt_m3)
; oligos_6-8nt_m3; m=0 (reference); ncol1=11; shift=0; ncol=11; mmAACACAAmh ; Alignment reference a 949 1129 2938 3059 158 3134 181 2999 2977 1051 889 c 973 884 251 176 2965 128 2938 207 224 880 938 g 723 818 114 116 111 72 190 134 123 712 756 t 807 621 149 101 218 118 143 112 128 809 869

eve_shift4 (eve)
; oligos_6-8nt_m3 versus eve; m=1/1; ncol2=8; w=0; offset=4; strand=D; shift=4; score=0.425082; ----mACaaTw ; cor=; Ncor= a 0 0 0 0 8 18 1 13 13 0 9 c 0 0 0 0 9 0 16 3 0 1 1 g 0 0 0 0 3 2 0 4 3 0 1 t 0 0 0 0 0 0 3 0 4 19 9

One-to-n matrix alignment; reference matrix: oligos_6-8nt_m4_shift0 ; 2 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6-8nt_m4_shift0 (oligos_6-8nt_m4)
; oligos_6-8nt_m4; m=0 (reference); ncol1=10; shift=0; ncol=10; wrTAyATAya ; Alignment reference a 607 949 20 2377 126 1841 4 2324 446 933 c 502 392 33 21 1426 149 26 27 617 437 g 435 630 16 0 211 229 55 21 360 449 t 855 428 2330 1 636 180 2314 27 976 580

Antp_shift4 (Antp)
; oligos_6-8nt_m4 versus Antp; m=1/1; ncol2=6; w=0; offset=4; strand=D; shift=4; score=0.424092; ----mATAAw ; cor=; Ncor= a 0 0 0 0 10.5 18 0 16.5 18 7.5 c 0 0 0 0 4.5 0 0 0 0 0 g 0 0 0 0 3 0 0 1.5 0 0 t 0 0 0 0 0 0 18 0 0 10.5

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
positions_6-8nt_m1_shift2 (positions_6-8nt_m1)				; positions_6-8nt_m1; m=0 (reference); ncol1=10; shift=2; ncol=12; --aaAAAAAAaa ; Alignment reference a 0 0 994 1074 2374 2362 2364 2367 2365 2374 1073 1061 c 0 0 497 454 0 0 0 0 0 0 384 419 g 0 0 434 419 0 0 0 0 0 0 382 393 t 0 0 449 427 0 12 10 7 9 0 535 501
hb_shift2 (hb)				; positions_6-8nt_m1 versus hb; m=1/4; ncol2=9; w=0; offset=0; strand=D; shift=2; score=0.733313; --mayAAAAAa- ; cor=; Ncor= a 0 0 30.2913 47.4563 1.00971 96.932 101.981 104 97.9417 102.99 68.6602 0 c 0 0 49.4757 16.1553 29.2816 1.00971 1.00971 0 1.00971 1.00971 8.07767 0 g 0 0 21.2039 17.165 11.1068 4.03883 0 0 4.03883 0 12.1165 0 t 0 0 3.02913 23.2233 62.6019 2.01942 1.00971 0 1.00971 0 15.1456 0
zen_shift4 (zen)				; positions_6-8nt_m1 versus zen; m=2/4; ncol2=6; w=0; offset=2; strand=D; shift=4; score=0.448429; ----AATwAA-- ; cor=; Ncor= a 0 0 0 0 11.9167 11.9167 0 8.66667 13 13 0 0 c 0 0 0 0 0.541667 0 1.08333 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0.541667 1.08333 11.9167 4.33333 0 0 0 0
cad_rc_shift0 (cad_rc)				; positions_6-8nt_m1 versus cad_rc; m=3/4; ncol2=9; w=-2; offset=-2; strand=R; shift=0; score=0.416893; WrtYrwAAA--- ; cor=; Ncor= a 9 8 1 0 7 4 12 11 11 0 0 0 c 0 1 3 9 1 2 0 2 0 0 0 0 g 0 4 3 0 5 1 1 0 0 0 0 0 t 4 0 6 4 0 6 0 0 2 0 0 0
gt_shift1 (gt)				; positions_6-8nt_m1 versus gt; m=4/4; ncol2=7; w=-1; offset=-1; strand=D; shift=1; score=0.409894; -GTmAwAW---- ; cor=; Ncor= a 0 0 1 5 8 3 8 6 0 0 0 0 c 0 1 1 3 0 0 0 0 0 0 0 0 g 0 7 0 0 0 0 0 0 0 0 0 0 t 0 0 6 0 0 5 0 2 0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
dyads_m10_shift0 (dyads_m10)				; dyads_m10; m=0 (reference); ncol1=12; shift=0; ncol=12; wwATAAATAAww ; Alignment reference a 747 726 1680 198 1754 1628 1767 109 1714 1534 805 669 c 344 353 47 86 47 52 40 116 50 93 295 349 g 319 252 81 53 34 45 25 54 56 60 284 257 t 486 565 88 1559 61 171 64 1617 76 209 512 621
hb_shift1 (hb)				; dyads_m10 versus hb; m=1/6; ncol2=9; w=0; offset=1; strand=D; shift=1; score=0.559162; -mayAAAAAa-- ; cor=; Ncor= a 0 30.2913 47.4563 1.00971 96.932 101.981 104 97.9417 102.99 68.6602 0 0 c 0 49.4757 16.1553 29.2816 1.00971 1.00971 0 1.00971 1.00971 8.07767 0 0 g 0 21.2039 17.165 11.1068 4.03883 0 0 4.03883 0 12.1165 0 0 t 0 3.02913 23.2233 62.6019 2.01942 1.00971 0 1.00971 0 15.1456 0 0
br-Z4_rc_shift3 (br-Z4_rc)				; dyads_m10 versus br-Z4_rc; m=2/6; ncol2=8; w=0; offset=3; strand=R; shift=3; score=0.518922; ---TAAhYAdT- ; cor=; Ncor= a 0 0 0 1 7 8 2 0 8 3 1 0 c 0 0 0 0 0 0 3 2 0 0 0 0 g 0 0 0 0 0 0 0 0 0 2 0 0 t 0 0 0 7 1 0 3 6 0 3 7 0
Antp_shift5 (Antp)				; dyads_m10 versus Antp; m=3/6; ncol2=6; w=0; offset=5; strand=D; shift=5; score=0.469787; -----mATAAw- ; cor=; Ncor= a 0 0 0 0 0 10.5 18 0 16.5 18 7.5 0 c 0 0 0 0 0 4.5 0 0 0 0 0 0 g 0 0 0 0 0 3 0 0 1.5 0 0 0 t 0 0 0 0 0 0 0 18 0 0 10.5 0
zen_shift1 (zen)				; dyads_m10 versus zen; m=4/6; ncol2=6; w=0; offset=1; strand=D; shift=1; score=0.455986; -AATwAA----- ; cor=; Ncor= a 0 11.9167 11.9167 0 8.66667 13 13 0 0 0 0 0 c 0 0.541667 0 1.08333 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0.541667 1.08333 11.9167 4.33333 0 0 0 0 0 0 0
ap_shift5 (ap)				; dyads_m10 versus ap; m=5/6; ncol2=6; w=0; offset=5; strand=D; shift=5; score=0.437673; -----AAThAt- ; cor=; Ncor= a 0 0 0 0 0 14 14 0 5 13 2 0 c 0 0 0 0 0 0 0 1 4 0 1 0 g 0 0 0 0 0 0 0 1 1 1 3 0 t 0 0 0 0 0 0 0 12 4 0 8 0
abd-A_shift6 (abd-A)				; dyads_m10 versus abd-A; m=6/6; ncol2=6; w=0; offset=6; strand=D; shift=6; score=0.42487; ------aTAAWT ; cor=; Ncor= a 0 0 0 0 0 0 27.439 0 40.6098 40.6098 14.2683 0 c 0 0 0 0 0 0 5.4878 3.29268 1.09756 0 0 3.29268 g 0 0 0 0 0 0 4.39024 1.09756 3.29268 0 0 6.58537 t 0 0 0 0 0 0 7.68293 40.6098 0 4.39024 30.7317 35.122