; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/01/25/peak-motifs.2026-01-25.201729_2026-01-25.201729_P12xBT/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/01/25/peak-motifs.2026-01-25.201729_2026-01-25.201729_P12xBT/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/01/25/peak-motifs.2026-01-25.201729_2026-01-25.201729_P12xBT/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/01/25/peak-motifs.2026-01-25.201729_2026-01-25.201729_P12xBT/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/01/25/peak-motifs.2026-01-25.201729_2026-01-25.201729_P12xBT/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	22	50	14	11	2	112	0	108	14	52
c	20	22	73	3	0	5	2	3	30	18
g	22	20	11	98	3	0	4	5	11	18
t	53	25	19	5	112	0	111	1	62	29
//
; Sites	117
>site_0
CTCCTATATT
>site_1
TCTGTATATC
>site_2
CTCGTCTAGG
>site_3
TTCGTATATT
>site_4
TCCGTATAGT
>site_5
GATGTATATA
>site_6
TCAGTATATA
>site_7
GCTGTATATA
>site_8
CAAGTATATA
>site_9
CTTGTATATA
>site_10
GTAGTATAAT
>site_11
TATGTATATA
>site_12
AGGGTATAAT
>site_13
GACGGATAGA
>site_14
GGCCTATATA
>site_15
GAGGTATACT
>site_16
TCAGTATACC
>site_17
GTCGTATATC
>site_18
GTCGTATAAA
>site_19
ACCGTATACG
>site_20
GGCGTATACG
>site_21
GACGGATACC
>site_22
TGGGTATACA
>site_23
TATGTATACC
>site_24
TACATATATA
>site_25
TACGTACATA
>site_26
GACGTAGATA
>site_27
ACCGAATATA
>site_28
AGCGTATATA
>site_29
CACGTATAAT
>site_30
TGGGTATATA
>site_31
TAAGTATACA
>site_32
TACATATACC
>site_33
TACATATATT
>site_34
TATGTATATC
>site_35
CTCGTATGTA
>site_36
TAGGTATATT
>site_37
TACTTATACA
>site_38
TAAGTATATG
>site_39
TACATATACT
>site_40
TACGTATGTA
>site_41
CTCGAATATA
>site_42
TACTTATATT
>site_43
TACGTATGGT
>site_44
TACGTATACG
>site_45
CACGTATACG
>site_46
AACTTATATA
>site_47
ATGGTATATA
>site_48
GAAGTATATA
>site_49
TTAGTATACT
>site_50
ATAGTATACT
>site_51
TGCGTATATA
>site_52
TGCGTATATT
>site_53
TCCGTAGACT
>site_54
TTCGTATATT
>site_55
AGCGTATAAA
>site_56
TCCGTATGTA
>site_57
TATGTATATT
>site_58
CACGTATATA
>site_59
TCCGTATCTA
>site_60
TACTTATATG
>site_61
TACATATAAG
>site_62
TACATATATT
>site_63
TATGTATATA
>site_64
TCCGTAGATA
>site_65
TACGTATGTA
>site_66
CCCGTATAAT
>site_67
GGTGTATATA
>site_68
TGTGTATATA
>site_69
TACGTATACA
>site_70
TACGTATTAT
>site_71
GGCGTATAGA
>site_72
CCTGTATAGA
>site_73
GACGTCTACC
>site_74
TATGTATATT
>site_75
TACATATATC
>site_76
GTCGTCTATC
>site_77
GTGGTATATC
>site_78
TAGGTATAGC
>site_79
ACTGTATATC
>site_80
TATGTATAAG
>site_81
ATCGTAGAGG
>site_82
GGAGTATAAT
>site_83
ATCATATATA
>site_84
CTCGTCTAGG
>site_85
CTCATATACT
>site_86
ACGGTATACA
>site_87
AACCTATATA
>site_88
TACTTATAGA
>site_89
AACGTATATA
>site_90
ACTGTATAGT
>site_91
TGCGTATAAT
>site_92
GACGTATAAA
>site_93
ACGGTATATC
>site_94
AGAGTATAAT
>site_95
CTGGTATATA
>site_96
CGCGTATACG
>site_97
GTCGTATACG
>site_98
TATGTATACA
>site_99
ATAGTATATG
>site_100
TATGTATATC
>site_101
ACCGTACATA
>site_102
CGCGTATACA
>site_103
GGCGTATACG
>site_104
TGCGTATACG
>site_105
TCCGTATCCC
>site_106
ATCGTATCCT
>site_107
TCCATATATA
>site_108
CCCGTATAAA
>site_109
CGCGTATATG
>site_110
AACGTATACT
>site_111
CTAGTATACG
>site_112
CTCGTCTATC
>site_113
TATGTATATA
>site_114
AACATATATA
>site_115
TCAGTATATC
>site_116
GACGGATATA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/25/peak-motifs.2026-01-25.201729_2026-01-25.201729_P12xBT/results/positions_6nt//peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/01/25/peak-motifs.2026-01-25.201729_2026-01-25.201729_P12xBT/results/positions_6nt//peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m1_rc.png
;
; Host name	rsat
; Job started	2026-01-25.201817
; Job done	2026-01-25.201817
; Seconds	0.14
;	user	0.14
;	system	0.03
;	cuser	0.27
;	csystem	0.05
