rsync -ruptl /var/www/html/rsat/perl-scripts/lib/js /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL


rsync -ruptl /var/www/html/rsat/public_html/images/program_icons/matrix-clustering_icons /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_query_matrices.jaspar -from jaspar -to tf -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/jaspar_2026_core_input_motifs_processed_1.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/jaspar_2026_core_input_motifs_processed_1.tf -from tf -to transfac -prefix_id jaspar_2026_core -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/jaspar_2026_core_input_motifs_processed.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/jaspar_2026_core_input_motifs_processed.tf  > /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -split -from tf -to tf -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/motif


 cat /var/www/html/rsat/R-scripts/matrix-clustering.R | /usr/bin/R --slave --no-save --no-restore --no-environ --args " infile = '/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/pairwise_compa.tab'; hclust.method = 'average'; description.file = '/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/pairwise_compa_matrix_descriptions.tab'; distance.table = '/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/distance_table.tab'; alignment.file = '/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/alignment_table.tab'; verbosity = 0; metric = 'Ncor'; heatmap.color.palette = 'YlOrRd'; heatmap.color.classes = '9'; export.newick = 0; radial.only = 0; draw.heatmap = 1; draw.consensus = 0; pos.hclust.in.heatmap = 'column'; lthsp = 'Ncor_0.4_cor_0.6_'; out.prefix = '/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering'; "


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_1_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_1_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_2_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_2_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_3_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_3_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_4_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_4_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_5_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_5_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_6_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_6_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_7_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_7_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_8_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_8_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_9_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_9_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_10_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_10_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_11_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_11_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_12_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_12_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_13_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_13_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_14_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_14_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_15_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_15_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_16_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_16_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_17_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_17_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_18_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_18_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_19_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_19_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_20_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_20_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_21_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_21_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_22_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_22_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_23_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_23_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_24_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_24_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_25_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_25_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_26_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_26_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_27_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_27_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_28_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_28_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_29_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_29_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_30_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_30_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_31_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_31_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_32_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_32_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_33_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_33_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_34_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_34_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_35_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_35_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_36_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_36_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_37_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_37_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_38_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_38_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_39_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_39_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_40_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_40_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_41_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_41_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_42_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_42_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_43_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_43_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_44_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_44_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_45_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_45_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_46_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_46_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_47_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_47_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_48_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_48_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_49_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_49_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_50_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_50_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_51_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_51_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_52_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_52_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_53_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_53_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_54_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_54_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_55_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_55_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_56_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_56_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_57_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_57_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_58_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_58_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_59_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_59_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_60_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_60_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_61_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_61_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_62_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_62_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_63_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_63_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_64_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_64_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_65_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_65_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_66_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_66_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_67_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_67_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_68_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_68_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_69_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_69_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_70_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_70_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_71_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_71_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_72_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_72_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_73_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_73_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_74_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_74_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_75_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_75_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_76_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_76_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_77_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_77_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_78_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_78_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_79_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_79_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_80_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_80_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_81_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_81_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_82_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_82_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_83_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_83_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_84_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_84_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_85_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_85_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_86_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_86_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_87_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_87_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_88_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_88_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_89_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_89_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_90_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_90_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_91_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_91_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_92_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_92_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_93_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_93_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_94_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_94_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_95_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_95_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_96_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_96_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_97_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_97_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_98_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_98_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_99_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_99_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_100_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_100_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_101_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_101_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_102_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_102_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_103_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_103_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_104_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_104_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_105_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_105_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_106_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_106_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_107_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_107_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_108_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_108_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_109_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_109_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_110_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_110_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_111_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_111_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_112_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_112_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_113_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_113_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_114_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_114_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_115_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_115_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_116_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_116_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_117_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_117_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_118_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_118_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_119_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_119_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_120_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_120_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_121_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_121_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_122_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_122_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_123_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_123_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_124_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_124_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_125_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_125_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_126_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_126_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_127_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_127_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_128_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_128_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_129_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_129_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_130_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_130_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_131_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_131_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_132_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_132_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_133_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_133_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_134_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_134_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_135_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_135_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_136_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_136_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_137_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_137_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_138_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_138_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_139_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_139_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_140_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_140_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_141_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_141_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_142_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_142_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_143_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_143_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_144_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_144_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_145_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_145_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_146_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_146_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_147_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_147_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_148_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_148_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_149_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_149_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_150_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_150_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_151_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_151_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_152_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_152_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_154_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_154_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_153_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_153_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_155_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_155_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_156_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_156_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_157_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_157_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_158_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_158_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_159_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_159_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_160_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_160_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_161_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_161_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_162_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_162_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_163_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_163_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_164_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_164_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_165_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_165_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_166_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_166_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_167_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_167_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_168_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_168_transfac_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf -from tf -to tf -matrix_id_file /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/cluster_169_motif_IDs.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/cluster_169_transfac_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m262_MA1929.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_100/cluster_100_matrices_temp.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m237_MA1634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m238_MA0462.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_1/cluster_1_node_1_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_100/cluster_100_matrices_temp.tf -from tf -to tf  -attr name cluster_100 -attr accession cluster_100 -set_attr merged_AC 'jaspar_2026_core:::MA1929.2.CTCF' -set_attr merged_ID 'MA1929.2.CTCF' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_100/cluster_100_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m352_MA1134.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m369_MA1144.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_2/cluster_1_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m358_MA1135.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m367_MA1138.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_3/cluster_1_node_3_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m288_MA0598.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m291_MA0640.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_2/cluster_10_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m292_MA0028.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m304_MA0759.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_1/cluster_10_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m334_MA0765.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m292_MA0028.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m304_MA0759.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_3/cluster_10_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_1/cluster_1_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_1/cluster_1_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_2/cluster_1_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_2/cluster_1_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_3/cluster_1_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_3/cluster_1_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_2/cluster_10_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_2/cluster_10_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_3/cluster_10_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_3/cluster_10_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_1/cluster_10_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_1/cluster_10_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_3/cluster_1_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223615_0DDkEI


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_2/cluster_10_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223615_Aa9z2T


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_3/cluster_10_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223615_dwZgcy


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_100/cluster_100_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_2/cluster_1_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223615_g3dUs5


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_1/cluster_10_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223615_e1h0Cx


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_1/cluster_1_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223615_QGE96i


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_3/cluster_1_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_3/cluster_10_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_2/cluster_10_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_2/cluster_1_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_1/cluster_10_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_1/cluster_1_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m350_MA0099.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m365_MA1130.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_4/cluster_1_node_4_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m355_MA1141.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m360_MA1128.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_5/cluster_1_node_5_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_5/cluster_1_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_5/cluster_1_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_4/cluster_1_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_4/cluster_1_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_4/cluster_1_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223616_T3XErs


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_5/cluster_1_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223616_Stkl5c


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_4/cluster_1_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_5/cluster_1_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m263_MA1930.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_101/cluster_101_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_101/cluster_101_matrices_temp.tf -from tf -to tf  -attr name cluster_101 -attr accession cluster_101 -set_attr merged_AC 'jaspar_2026_core:::MA1930.2.CTCF' -set_attr merged_ID 'MA1930.2.CTCF' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_101/cluster_101_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m240_MA0835.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m237_MA1634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m238_MA0462.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_7/cluster_1_node_7_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m352_MA1134.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m369_MA1144.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m358_MA1135.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m367_MA1138.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_6/cluster_1_node_6_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_6/cluster_1_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_6/cluster_1_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_7/cluster_1_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_7/cluster_1_node_7_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_7/cluster_1_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223617_sjW4uh


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_101/cluster_101_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_6/cluster_1_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223617_fgi7xe


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_7/cluster_1_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_6/cluster_1_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m149_MA1597.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_102/cluster_102_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_102/cluster_102_matrices_temp.tf -from tf -to tf  -attr name cluster_102 -attr accession cluster_102 -set_attr merged_AC 'jaspar_2026_core:::MA1597.1.ZNF528' -set_attr merged_ID 'MA1597.1.ZNF528' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_102/cluster_102_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_102/cluster_102_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m716_MA1654.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m728_MA1977.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_103/merged_consensuses/node_1/cluster_103_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m354_MA0490.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m357_MA0491.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_8/cluster_1_node_8_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_103/merged_consensuses/node_1/cluster_103_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_103 -name cluster_103 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_103/merged_consensuses/node_1/cluster_103_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_8/cluster_1_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_8/cluster_1_node_8_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_8/cluster_1_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223619_L4uKEt


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_103/merged_consensuses/node_1/cluster_103_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223619_SQ5vYa


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_8/cluster_1_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_103/merged_consensuses/node_1/cluster_103_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m212_MA2332.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m326_MA0761.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_4/cluster_10_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_4/cluster_10_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_4/cluster_10_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_4/cluster_10_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223620_0RAmLk


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_4/cluster_10_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m15_MA0155.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_104/cluster_104_matrices_temp.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m486_MA0501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m490_MA0089.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_9/cluster_1_node_9_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_104/cluster_104_matrices_temp.tf -from tf -to tf  -attr name cluster_104 -attr accession cluster_104 -set_attr merged_AC 'jaspar_2026_core:::MA0155.1.INSM1' -set_attr merged_ID 'MA0155.1.INSM1' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_104/cluster_104_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m324_MA0098.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m345_MA0475.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_5/cluster_10_node_5_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_9/cluster_1_node_9_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_9/cluster_1_node_9_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_5/cluster_10_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_5/cluster_10_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_9/cluster_1_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223621_bWAyct


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_5/cluster_10_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223621_TjWK1z


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_104/cluster_104_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_5/cluster_10_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_9/cluster_1_node_9_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m729_MA1726.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_105/cluster_105_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_105/cluster_105_matrices_temp.tf -from tf -to tf  -attr name cluster_105 -attr accession cluster_105 -set_attr merged_AC 'jaspar_2026_core:::MA1726.2.ZNF331' -set_attr merged_ID 'MA1726.2.ZNF331' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_105/cluster_105_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_105/cluster_105_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m749_MA1984.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_106/cluster_106_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_106/cluster_106_matrices_temp.tf -from tf -to tf  -attr name cluster_106 -attr accession cluster_106 -set_attr merged_AC 'jaspar_2026_core:::MA1984.2.ZNF667' -set_attr merged_ID 'MA1984.2.ZNF667' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_106/cluster_106_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m359_MA0477.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m354_MA0490.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m357_MA0491.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_11/cluster_1_node_11_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m245_MA1928.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m240_MA0835.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m237_MA1634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m238_MA0462.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_10/cluster_1_node_10_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m310_MA0760.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m344_MA0156.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_6/cluster_10_node_6_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_11/cluster_1_node_11_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_11/cluster_1_node_11_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_10/cluster_1_node_10_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_10/cluster_1_node_10_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_6/cluster_10_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_6/cluster_10_node_6_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_106/cluster_106_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_11/cluster_1_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223623_du0iHS


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_6/cluster_10_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223623_OcJpf5


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_10/cluster_1_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223623_x80a8I


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_11/cluster_1_node_11_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_6/cluster_10_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_10/cluster_1_node_10_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m183_MA2462.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m787_MA2526.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_107/merged_consensuses/node_1/cluster_107_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m289_MA0473.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m288_MA0598.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m291_MA0640.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_7/cluster_10_node_7_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_107/merged_consensuses/node_1/cluster_107_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_107 -name cluster_107 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_107/merged_consensuses/node_1/cluster_107_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_7/cluster_10_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_7/cluster_10_node_7_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_7/cluster_10_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223624_gecZfh


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_107/merged_consensuses/node_1/cluster_107_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223624_VV9ooj


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_7/cluster_10_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_107/merged_consensuses/node_1/cluster_107_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m332_MA0763.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m310_MA0760.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m344_MA0156.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_8/cluster_10_node_8_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_8/cluster_10_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_8/cluster_10_node_8_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_8/cluster_10_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223625_1A93Xu


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_8/cluster_10_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m114_MA1124.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m12_MA0149.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_108/merged_consensuses/node_1/cluster_108_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m386_MA1954.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m387_MA1955.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_9/cluster_10_node_9_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_108/merged_consensuses/node_1/cluster_108_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_108 -name cluster_108 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_108/merged_consensuses/node_1/cluster_108_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_9/cluster_10_node_9_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_9/cluster_10_node_9_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_108/merged_consensuses/node_1/cluster_108_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223626_7CfiOX


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_9/cluster_10_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223626_P18MW1


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_9/cluster_10_node_9_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_108/merged_consensuses/node_1/cluster_108_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m333_MA0764.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m334_MA0765.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m292_MA0028.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m304_MA0759.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_10/cluster_10_node_10_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m332_MA0763.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m310_MA0760.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m344_MA0156.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m333_MA0764.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m334_MA0765.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m292_MA0028.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m304_MA0759.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_11/cluster_10_node_11_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_10/cluster_10_node_10_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_10/cluster_10_node_10_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_11/cluster_10_node_11_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_11/cluster_10_node_11_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_11/cluster_10_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223627_a2q4aZ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_10/cluster_10_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223627_C1RjnH


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_11/cluster_10_node_11_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_10/cluster_10_node_10_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m533_MA1529.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_109/cluster_109_matrices_temp.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m361_MA1137.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m350_MA0099.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m365_MA1130.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_12/cluster_1_node_12_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m485_MA1520.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m488_MA1521.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_13/cluster_1_node_13_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_109/cluster_109_matrices_temp.tf -from tf -to tf  -attr name cluster_109 -attr accession cluster_109 -set_attr merged_AC 'jaspar_2026_core:::MA1529.2.NHLH2' -set_attr merged_ID 'MA1529.2.NHLH2' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_109/cluster_109_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_13/cluster_1_node_13_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_13/cluster_1_node_13_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_12/cluster_1_node_12_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_12/cluster_1_node_12_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_109/cluster_109_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_12/cluster_1_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223630_Z5nFCq


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_13/cluster_1_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223630_a6HoFZ


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_13/cluster_1_node_13_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_12/cluster_1_node_12_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m498_MA1640.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m572_MA1113.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_14/cluster_1_node_14_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m294_MA1708.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m341_MA0645.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_12/cluster_10_node_12_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m355_MA1141.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m360_MA1128.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m361_MA1137.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m350_MA0099.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m365_MA1130.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_15/cluster_1_node_15_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_14/cluster_1_node_14_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_14/cluster_1_node_14_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_12/cluster_10_node_12_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_12/cluster_10_node_12_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_15/cluster_1_node_15_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_15/cluster_1_node_15_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_14/cluster_1_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223632_telVk0


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_15/cluster_1_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223632_4dmdM5


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_12/cluster_10_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223632_C1JKWd


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_14/cluster_1_node_14_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_12/cluster_10_node_12_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_15/cluster_1_node_15_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m112_MA0872.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m93_MA0815.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_1/cluster_11_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m662_MA0811.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m664_MA0524.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_2/cluster_11_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m92_MA0813.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m112_MA0872.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m93_MA0815.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_3/cluster_11_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_2/cluster_11_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_11 -name cluster_11 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_2/cluster_11_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_1/cluster_11_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_11 -name cluster_11 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_1/cluster_11_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_3/cluster_11_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_11 -name cluster_11 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_3/cluster_11_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_1/cluster_11_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223633_H3vyRv


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_2/cluster_11_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223633_qj7zOo


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_3/cluster_11_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223633_N2npsG


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_1/cluster_11_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_3/cluster_11_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_2/cluster_11_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m38_MA0655.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m359_MA0477.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m354_MA0490.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m357_MA0491.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_16/cluster_1_node_16_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_16/cluster_1_node_16_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_16/cluster_1_node_16_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_16/cluster_1_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223634_495Txu


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_16/cluster_1_node_16_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m385_MA1953.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m388_MA1956.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_13/cluster_10_node_13_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m283_MA0154.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m892_MA0116.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_5/cluster_11_node_5_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m660_MA0810.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m662_MA0811.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m664_MA0524.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_4/cluster_11_node_4_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m92_MA0813.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m112_MA0872.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m93_MA0815.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m660_MA0810.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m662_MA0811.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m664_MA0524.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_6/cluster_11_node_6_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_5/cluster_11_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_11 -name cluster_11 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_5/cluster_11_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_13/cluster_10_node_13_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_13/cluster_10_node_13_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_4/cluster_11_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_11 -name cluster_11 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_4/cluster_11_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_6/cluster_11_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_11 -name cluster_11 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_6/cluster_11_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_13/cluster_10_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223635_fJgClD


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_4/cluster_11_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223635_sOfj14


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_6/cluster_11_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223635_ZQkEwa


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_5/cluster_11_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223635_ZSe8eL


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_6/cluster_11_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_13/cluster_10_node_13_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_5/cluster_11_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_4/cluster_11_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m328_MA1940.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m335_MA1944.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_15/cluster_10_node_15_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m386_MA1954.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m387_MA1955.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m385_MA1953.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m388_MA1956.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_14/cluster_10_node_14_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m352_MA1134.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m369_MA1144.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m358_MA1135.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m367_MA1138.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m355_MA1141.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m360_MA1128.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m361_MA1137.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m350_MA0099.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m365_MA1130.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_17/cluster_1_node_17_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_15/cluster_10_node_15_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_15/cluster_10_node_15_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_14/cluster_10_node_14_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_14/cluster_10_node_14_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_17/cluster_1_node_17_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_17/cluster_1_node_17_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_14/cluster_10_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223636_mzVXYX


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_15/cluster_10_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223636_QW1NuA


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_17/cluster_1_nb_motifs_9.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223636_fS63DF


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_14/cluster_10_node_14_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_15/cluster_10_node_15_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_17/cluster_1_node_17_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m209_MA2329.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m305_MA0076.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_17/cluster_10_node_17_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_17/cluster_10_node_17_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_17/cluster_10_node_17_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m283_MA0154.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m892_MA0116.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m92_MA0813.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m112_MA0872.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m93_MA0815.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m660_MA0810.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m662_MA0811.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m664_MA0524.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_7/cluster_11_node_7_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m324_MA0098.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m345_MA0475.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m332_MA0763.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m310_MA0760.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m344_MA0156.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m333_MA0764.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m334_MA0765.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m292_MA0028.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m304_MA0759.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_16/cluster_10_node_16_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m325_MA1484.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m324_MA0098.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m345_MA0475.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m332_MA0763.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m310_MA0760.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m344_MA0156.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m333_MA0764.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m334_MA0765.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m292_MA0028.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m304_MA0759.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_18/cluster_10_node_18_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_7/cluster_11_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_11 -name cluster_11 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_7/cluster_11_node_7_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_16/cluster_10_node_16_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_16/cluster_10_node_16_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_18/cluster_10_node_18_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_18/cluster_10_node_18_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_17/cluster_10_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223637_iUtOxo


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_18/cluster_10_nb_motifs_10.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223637_fiKU1h


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_7/cluster_11_nb_motifs_8.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223637_qQ2pNE


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_16/cluster_10_nb_motifs_9.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223637_DlVo2p


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_17/cluster_10_node_17_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_11/merged_consensuses/node_7/cluster_11_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_18/cluster_10_node_18_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_16/cluster_10_node_16_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m202_MA1633.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m38_MA0655.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m359_MA0477.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m354_MA0490.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m357_MA0491.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_18/cluster_1_node_18_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m352_MA1134.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m369_MA1144.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m358_MA1135.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m367_MA1138.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m355_MA1141.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m360_MA1128.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m361_MA1137.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m350_MA0099.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m365_MA1130.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m202_MA1633.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m38_MA0655.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m359_MA0477.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m354_MA0490.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m357_MA0491.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_19/cluster_1_node_19_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_18/cluster_1_node_18_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_18/cluster_1_node_18_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_19/cluster_1_node_19_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_19/cluster_1_node_19_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_18/cluster_1_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223638_gj4moW


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_19/cluster_1_nb_motifs_14.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223638_bPGUhc


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_18/cluster_1_node_18_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_19/cluster_1_node_19_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m172_MA1931.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m346_MA1949.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_19/cluster_10_node_19_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_19/cluster_10_node_19_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_19/cluster_10_node_19_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_19/cluster_10_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223639_9x2KRx


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_19/cluster_10_node_19_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m330_MA1942.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m381_MA1952.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_20/cluster_10_node_20_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_20/cluster_10_node_20_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_20/cluster_10_node_20_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_20/cluster_10_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223640_ctBkyM


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_20/cluster_10_node_20_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m339_MA1948.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m328_MA1940.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m335_MA1944.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_21/cluster_10_node_21_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_21/cluster_10_node_21_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_21/cluster_10_node_21_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_21/cluster_10_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223642_ZzMiQP


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_21/cluster_10_node_21_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m570_MA1546.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_110/cluster_110_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_110/cluster_110_matrices_temp.tf -from tf -to tf  -attr name cluster_110 -attr accession cluster_110 -set_attr merged_AC 'jaspar_2026_core:::MA1546.2.PAX3' -set_attr merged_ID 'MA1546.2.PAX3' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_110/cluster_110_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m314_MA1936.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m337_MA1946.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_22/cluster_10_node_22_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_22/cluster_10_node_22_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_22/cluster_10_node_22_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_110/cluster_110_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_22/cluster_10_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223643_utQ53c


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_22/cluster_10_node_22_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m164_MA1718.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_111/cluster_111_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_111/cluster_111_matrices_temp.tf -from tf -to tf  -attr name cluster_111 -attr accession cluster_111 -set_attr merged_AC 'jaspar_2026_core:::MA1718.1.ZNF8' -set_attr merged_ID 'MA1718.1.ZNF8' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_111/cluster_111_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m173_MA1957.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m172_MA1931.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m346_MA1949.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_23/cluster_10_node_23_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_23/cluster_10_node_23_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_23/cluster_10_node_23_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_111/cluster_111_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_23/cluster_10_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223644_FpKzkt


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_23/cluster_10_node_23_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m805_MA2544.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_112/cluster_112_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_112/cluster_112_matrices_temp.tf -from tf -to tf  -attr name cluster_112 -attr accession cluster_112 -set_attr merged_AC 'jaspar_2026_core:::MA2544.1.ZKSCAN4' -set_attr merged_ID 'MA2544.1.ZKSCAN4' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_112/cluster_112_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m327_MA0762.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m325_MA1484.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m324_MA0098.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m345_MA0475.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m332_MA0763.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m310_MA0760.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m344_MA0156.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m333_MA0764.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m334_MA0765.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m292_MA0028.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m304_MA0759.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_24/cluster_10_node_24_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_24/cluster_10_node_24_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_24/cluster_10_node_24_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_112/cluster_112_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_24/cluster_10_nb_motifs_11.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223645_dK8Ntd


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_24/cluster_10_node_24_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m160_MA1715.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m261_MA0139.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_113/merged_consensuses/node_1/cluster_113_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_113/merged_consensuses/node_1/cluster_113_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_113 -name cluster_113 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_113/merged_consensuses/node_1/cluster_113_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_113/merged_consensuses/node_1/cluster_113_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223646_aj0gXP


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_113/merged_consensuses/node_1/cluster_113_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m814_MA2553.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_114/cluster_114_matrices_temp.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m362_MA1142.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m464_MA1132.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_20/cluster_1_node_20_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_114/cluster_114_matrices_temp.tf -from tf -to tf  -attr name cluster_114 -attr accession cluster_114 -set_attr merged_AC 'jaspar_2026_core:::MA2553.1.ZNF407' -set_attr merged_ID 'MA2553.1.ZNF407' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_114/cluster_114_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_20/cluster_1_node_20_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_20/cluster_1_node_20_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_114/cluster_114_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_20/cluster_1_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223649_UfoG1k


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_20/cluster_1_node_20_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m745_MA2496.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_115/cluster_115_matrices_temp.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m13_MA0150.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m486_MA0501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m490_MA0089.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_21/cluster_1_node_21_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_115/cluster_115_matrices_temp.tf -from tf -to tf  -attr name cluster_115 -attr accession cluster_115 -set_attr merged_AC 'jaspar_2026_core:::MA2496.1.ZNF596' -set_attr merged_ID 'MA2496.1.ZNF596' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_115/cluster_115_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_21/cluster_1_node_21_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_21/cluster_1_node_21_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m294_MA1708.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m341_MA0645.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m209_MA2329.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m305_MA0076.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_25/cluster_10_node_25_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_25/cluster_10_node_25_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_25/cluster_10_node_25_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_25/cluster_10_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223650_8imJil


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_115/cluster_115_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_21/cluster_1_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223650_FN0AaB


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_21/cluster_1_node_21_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_25/cluster_10_node_25_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m81_MA0794.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_116/cluster_116_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_116/cluster_116_matrices_temp.tf -from tf -to tf  -attr name cluster_116 -attr accession cluster_116 -set_attr merged_AC 'jaspar_2026_core:::MA0794.1.PROX1' -set_attr merged_ID 'MA0794.1.PROX1' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_116/cluster_116_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m315_MA1937.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m451_MA1958.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_26/cluster_10_node_26_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_26/cluster_10_node_26_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_26/cluster_10_node_26_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_116/cluster_116_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_26/cluster_10_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223651_udgxmC


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_26/cluster_10_node_26_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m558_MA1541.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_117/cluster_117_matrices_temp.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m497_MA1639.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m498_MA1640.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m572_MA1113.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_22/cluster_1_node_22_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_117/cluster_117_matrices_temp.tf -from tf -to tf  -attr name cluster_117 -attr accession cluster_117 -set_attr merged_AC 'jaspar_2026_core:::MA1541.2.NR6A1' -set_attr merged_ID 'MA1541.2.NR6A1' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_117/cluster_117_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_22/cluster_1_node_22_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_22/cluster_1_node_22_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_22/cluster_1_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223652_MPT1PH


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_117/cluster_117_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_22/cluster_1_node_22_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m48_MA0083.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m885_MA2692.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_118/merged_consensuses/node_1/cluster_118_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_118/merged_consensuses/node_1/cluster_118_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_118 -name cluster_118 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_118/merged_consensuses/node_1/cluster_118_node_1_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m391_MA0062.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m212_MA2332.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m326_MA0761.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_27/cluster_10_node_27_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m386_MA1954.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m387_MA1955.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m385_MA1953.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m388_MA1956.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m314_MA1936.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m337_MA1946.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_28/cluster_10_node_28_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_27/cluster_10_node_27_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_27/cluster_10_node_27_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_28/cluster_10_node_28_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_28/cluster_10_node_28_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_118/merged_consensuses/node_1/cluster_118_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223653_R4NJdr


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_28/cluster_10_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223653_nwGG9E


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_27/cluster_10_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223653_OjfKYI


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_27/cluster_10_node_27_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_118/merged_consensuses/node_1/cluster_118_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_28/cluster_10_node_28_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m313_MA1935.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m330_MA1942.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m381_MA1952.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_29/cluster_10_node_29_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_29/cluster_10_node_29_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_29/cluster_10_node_29_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_29/cluster_10_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223655_w55Nmp


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_29/cluster_10_node_29_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m676_MA1575.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_119/cluster_119_matrices_temp.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m364_MA0478.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m487_MA0841.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_24/cluster_1_node_24_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m348_MA0476.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m362_MA1142.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m464_MA1132.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_23/cluster_1_node_23_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_119/cluster_119_matrices_temp.tf -from tf -to tf  -attr name cluster_119 -attr accession cluster_119 -set_attr merged_AC 'jaspar_2026_core:::MA1575.2.THRB' -set_attr merged_ID 'MA1575.2.THRB' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_119/cluster_119_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_24/cluster_1_node_24_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_24/cluster_1_node_24_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_23/cluster_1_node_23_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_23/cluster_1_node_23_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m352_MA1134.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m369_MA1144.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m358_MA1135.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m367_MA1138.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m355_MA1141.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m360_MA1128.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m361_MA1137.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m350_MA0099.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m365_MA1130.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m202_MA1633.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m38_MA0655.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m359_MA0477.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m354_MA0490.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m357_MA0491.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m364_MA0478.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m487_MA0841.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_25/cluster_1_node_25_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_25/cluster_1_node_25_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_25/cluster_1_node_25_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_119/cluster_119_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_23/cluster_1_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223656_pTTOTt


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_24/cluster_1_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223656_1Pkk4w


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_25/cluster_1_nb_motifs_16.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223656_pZ85ig


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_23/cluster_1_node_23_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_24/cluster_1_node_24_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_25/cluster_1_node_25_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m104_MA0855.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m105_MA0856.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_1/cluster_12_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m555_MA1112.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m556_MA0160.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_3/cluster_12_node_3_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m592_MA1550.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m104_MA0855.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m105_MA0856.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_2/cluster_12_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m290_MA1483.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m31_MA0136.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_30/cluster_10_node_30_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_1/cluster_12_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_1/cluster_12_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_2/cluster_12_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_2/cluster_12_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_3/cluster_12_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_3/cluster_12_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_30/cluster_10_node_30_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_30/cluster_10_node_30_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_2/cluster_12_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223657_pEJ1BL


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_30/cluster_10_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223657_tzsuFN


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_3/cluster_12_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223657_3P3xTm


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_1/cluster_12_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223657_AmGQvE


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_2/cluster_12_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_3/cluster_12_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_1/cluster_12_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_30/cluster_10_node_30_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m551_MA1537.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m675_MA1574.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_4/cluster_12_node_4_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m230_MA0496.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m13_MA0150.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m486_MA0501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m490_MA0089.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_27/cluster_1_node_27_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_4/cluster_12_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_4/cluster_12_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_27/cluster_1_node_27_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_27/cluster_1_node_27_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m66_MA0474.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m327_MA0762.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m325_MA1484.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m324_MA0098.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m345_MA0475.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m332_MA0763.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m310_MA0760.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m344_MA0156.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m333_MA0764.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m334_MA0765.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m292_MA0028.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m304_MA0759.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_31/cluster_10_node_31_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m348_MA0476.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m362_MA1142.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m464_MA1132.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m352_MA1134.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m369_MA1144.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m358_MA1135.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m367_MA1138.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m355_MA1141.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m360_MA1128.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m361_MA1137.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m350_MA0099.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m365_MA1130.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m202_MA1633.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m38_MA0655.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m359_MA0477.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m354_MA0490.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m357_MA0491.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m364_MA0478.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m487_MA0841.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_26/cluster_1_node_26_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_26/cluster_1_node_26_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_26/cluster_1_node_26_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_31/cluster_10_node_31_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_31/cluster_10_node_31_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_4/cluster_12_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223659_2v36F3


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_27/cluster_1_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223659_hFpFd1


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_31/cluster_10_nb_motifs_12.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223659_UCUqU6


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_26/cluster_1_nb_motifs_19.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223659_SZVE94


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_27/cluster_1_node_27_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_4/cluster_12_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_31/cluster_10_node_31_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_26/cluster_1_node_26_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m289_MA0473.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m288_MA0598.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m291_MA0640.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m294_MA1708.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m341_MA0645.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m209_MA2329.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m305_MA0076.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_32/cluster_10_node_32_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_32/cluster_10_node_32_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_32/cluster_10_node_32_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_32/cluster_10_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223701_adwpD4


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_32/cluster_10_node_32_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m547_MA1535.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m549_MA1536.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_5/cluster_12_node_5_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_5/cluster_12_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_5/cluster_12_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_5/cluster_12_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223703_kDBNIW


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_5/cluster_12_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m612_MA1150.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m613_MA1151.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_6/cluster_12_node_6_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m548_MA0504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m592_MA1550.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m104_MA0855.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m105_MA0856.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_7/cluster_12_node_7_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_6/cluster_12_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_6/cluster_12_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_7/cluster_12_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_7/cluster_12_node_7_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m231_MA1101.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m348_MA0476.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m362_MA1142.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m464_MA1132.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m352_MA1134.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m369_MA1144.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m358_MA1135.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m367_MA1138.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m355_MA1141.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m360_MA1128.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m361_MA1137.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m350_MA0099.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m365_MA1130.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m202_MA1633.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m38_MA0655.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m359_MA0477.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m354_MA0490.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m357_MA0491.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m364_MA0478.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m487_MA0841.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_28/cluster_1_node_28_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_28/cluster_1_node_28_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_28/cluster_1_node_28_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_6/cluster_12_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223704_excKjW


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_7/cluster_12_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223704_bdiiwW


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_28/cluster_1_nb_motifs_20.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223704_1uX219


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_7/cluster_12_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_6/cluster_12_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_28/cluster_1_node_28_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m551_MA1537.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m675_MA1574.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m548_MA0504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m592_MA1550.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m104_MA0855.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m105_MA0856.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_8/cluster_12_node_8_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_8/cluster_12_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_8/cluster_12_node_8_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_8/cluster_12_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223705_Q28QII


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_8/cluster_12_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m4_MA0071.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m612_MA1150.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m613_MA1151.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_9/cluster_12_node_9_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_9/cluster_12_node_9_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_9/cluster_12_node_9_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_9/cluster_12_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223706_OTuuUC


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_9/cluster_12_node_9_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m321_MA0592.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m322_MA0141.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_10/cluster_12_node_10_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m300_MA0686.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m855_MA2594.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_33/cluster_10_node_33_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_10/cluster_12_node_10_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_10/cluster_12_node_10_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_33/cluster_10_node_33_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_33/cluster_10_node_33_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_10/cluster_12_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223707_rYd0JG


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_33/cluster_10_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223707_Gj1HaJ


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_33/cluster_10_node_33_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_10/cluster_12_node_10_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m347_MA1950.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m386_MA1954.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m387_MA1955.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m385_MA1953.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m388_MA1956.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m314_MA1936.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m337_MA1946.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_34/cluster_10_node_34_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_34/cluster_10_node_34_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_34/cluster_10_node_34_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_34/cluster_10_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223709_MahlJ7


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_34/cluster_10_node_34_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m552_MA1111.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m555_MA1112.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m556_MA0160.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_11/cluster_12_node_11_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_11/cluster_12_node_11_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_11/cluster_12_node_11_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_11/cluster_12_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223710_ymNKKI


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_11/cluster_12_node_11_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m611_MA0072.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m4_MA0071.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m612_MA1150.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m613_MA1151.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_12/cluster_12_node_12_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m30_MA0641.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m290_MA1483.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m31_MA0136.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_35/cluster_10_node_35_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m296_MA1932.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m315_MA1937.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m451_MA1958.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_36/cluster_10_node_36_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_36/cluster_10_node_36_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_36/cluster_10_node_36_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_35/cluster_10_node_35_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_35/cluster_10_node_35_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_12/cluster_12_node_12_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_12/cluster_12_node_12_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_35/cluster_10_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223711_C0wVCM


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_12/cluster_12_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223711_uJxcG8


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_36/cluster_10_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223711_H5IuXP


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_35/cluster_10_node_35_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_12/cluster_12_node_12_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_36/cluster_10_node_36_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m122_MA1421.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m67_MA0768.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_14/cluster_12_node_14_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m135_MA1540.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m321_MA0592.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m322_MA0141.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_13/cluster_12_node_13_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_13/cluster_12_node_13_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_13/cluster_12_node_13_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_14/cluster_12_node_14_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_14/cluster_12_node_14_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_14/cluster_12_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223712_A3rG77


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_13/cluster_12_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223712_gsHZhk


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_14/cluster_12_node_14_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_13/cluster_12_node_13_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m2_MA0065.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m8_MA0115.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_15/cluster_12_node_15_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m339_MA1948.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m328_MA1940.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m335_MA1944.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m173_MA1957.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m172_MA1931.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m346_MA1949.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_37/cluster_10_node_37_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_15/cluster_12_node_15_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_15/cluster_12_node_15_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_37/cluster_10_node_37_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_37/cluster_10_node_37_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_37/cluster_10_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223713_fRsCqi


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_15/cluster_12_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223713_xDY31A


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_37/cluster_10_node_37_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_15/cluster_12_node_15_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m424_MA1494.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m551_MA1537.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m675_MA1574.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m548_MA0504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m592_MA1550.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m104_MA0855.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m105_MA0856.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_16/cluster_12_node_16_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m391_MA0062.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m212_MA2332.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m326_MA0761.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m66_MA0474.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m327_MA0762.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m325_MA1484.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m324_MA0098.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m345_MA0475.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m332_MA0763.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m310_MA0760.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m344_MA0156.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m333_MA0764.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m334_MA0765.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m292_MA0028.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m304_MA0759.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_38/cluster_10_node_38_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_16/cluster_12_node_16_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_16/cluster_12_node_16_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_38/cluster_10_node_38_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_38/cluster_10_node_38_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_16/cluster_12_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223714_8qDhCw


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_38/cluster_10_nb_motifs_15.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223715_WE4P97


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_16/cluster_12_node_16_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_38/cluster_10_node_38_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m203_MA2324.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m766_MA2504.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_17/cluster_12_node_17_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m654_MA0769.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m655_MA0523.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_18/cluster_12_node_18_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_17/cluster_12_node_17_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_17/cluster_12_node_17_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_18/cluster_12_node_18_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_18/cluster_12_node_18_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m313_MA1935.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m330_MA1942.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m381_MA1952.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m347_MA1950.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m386_MA1954.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m387_MA1955.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m385_MA1953.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m388_MA1956.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m314_MA1936.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m337_MA1946.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_39/cluster_10_node_39_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_39/cluster_10_node_39_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_39/cluster_10_node_39_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_17/cluster_12_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223715_cs68yd


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_18/cluster_12_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223716_IxYLi3


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_39/cluster_10_nb_motifs_10.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223716_zpTJIr


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_17/cluster_12_node_17_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_18/cluster_12_node_18_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_39/cluster_10_node_39_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m245_MA1928.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m240_MA0835.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m237_MA1634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m238_MA0462.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m231_MA1101.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m348_MA0476.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m362_MA1142.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m464_MA1132.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m352_MA1134.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m369_MA1144.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m358_MA1135.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m367_MA1138.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m355_MA1141.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m360_MA1128.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m361_MA1137.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m350_MA0099.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m365_MA1130.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m202_MA1633.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m38_MA0655.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m359_MA0477.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m354_MA0490.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m357_MA0491.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m364_MA0478.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m487_MA0841.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_29/cluster_1_node_29_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_29/cluster_1_node_29_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_29/cluster_1_node_29_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_29/cluster_1_nb_motifs_24.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223716_9xYtLr


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_29/cluster_1_node_29_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m547_MA1535.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m549_MA1536.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m552_MA1111.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m555_MA1112.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m556_MA0160.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_20/cluster_12_node_20_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m591_MA1148.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m424_MA1494.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m551_MA1537.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m675_MA1574.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m548_MA0504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m592_MA1550.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m104_MA0855.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m105_MA0856.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_19/cluster_12_node_19_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_20/cluster_12_node_20_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_20/cluster_12_node_20_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m30_MA0641.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m290_MA1483.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m31_MA0136.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m391_MA0062.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m212_MA2332.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m326_MA0761.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m66_MA0474.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m327_MA0762.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m325_MA1484.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m324_MA0098.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m345_MA0475.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m332_MA0763.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m310_MA0760.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m344_MA0156.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m333_MA0764.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m334_MA0765.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m292_MA0028.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m304_MA0759.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_40/cluster_10_node_40_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_19/cluster_12_node_19_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_19/cluster_12_node_19_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_40/cluster_10_node_40_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_40/cluster_10_node_40_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_20/cluster_12_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223718_rIUEGp


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_19/cluster_12_nb_motifs_8.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223718_38tFjy


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_40/cluster_10_nb_motifs_18.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223718_SUy4RO


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_20/cluster_12_node_20_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_19/cluster_12_node_19_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_40/cluster_10_node_40_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m485_MA1520.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m488_MA1521.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m230_MA0496.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m13_MA0150.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m486_MA0501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m490_MA0089.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_30/cluster_1_node_30_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_30/cluster_1_node_30_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_30/cluster_1_node_30_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_30/cluster_1_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223720_Qrht3B


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_30/cluster_1_node_30_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m296_MA1932.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m315_MA1937.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m451_MA1958.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m339_MA1948.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m328_MA1940.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m335_MA1944.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m173_MA1957.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m172_MA1931.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m346_MA1949.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_41/cluster_10_node_41_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_41/cluster_10_node_41_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_41/cluster_10_node_41_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_41/cluster_10_nb_motifs_9.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223722_QDEBKI


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_41/cluster_10_node_41_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m803_MA2542.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m203_MA2324.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m766_MA2504.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_21/cluster_12_node_21_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_21/cluster_12_node_21_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_21/cluster_12_node_21_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_21/cluster_12_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223723_vfOnjG


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_21/cluster_12_node_21_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m338_MA1947.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m313_MA1935.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m330_MA1942.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m381_MA1952.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m347_MA1950.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m386_MA1954.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m387_MA1955.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m385_MA1953.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m388_MA1956.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m314_MA1936.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m337_MA1946.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_42/cluster_10_node_42_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_42/cluster_10_node_42_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_42/cluster_10_node_42_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_42/cluster_10_nb_motifs_11.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223724_3NPsYZ


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_42/cluster_10_node_42_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m2_MA0065.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m8_MA0115.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m591_MA1148.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m424_MA1494.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m551_MA1537.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m675_MA1574.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m548_MA0504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m592_MA1550.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m104_MA0855.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m105_MA0856.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_22/cluster_12_node_22_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_22/cluster_12_node_22_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_22/cluster_12_node_22_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_22/cluster_12_nb_motifs_10.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223725_Z2SQKw


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_22/cluster_12_node_22_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m571_MA0070.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m497_MA1639.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m498_MA1640.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m572_MA1113.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_31/cluster_1_node_31_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_31/cluster_1_node_31_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_31/cluster_1_node_31_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m289_MA0473.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m288_MA0598.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m291_MA0640.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m294_MA1708.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m341_MA0645.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m209_MA2329.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m305_MA0076.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m30_MA0641.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m290_MA1483.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m31_MA0136.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m391_MA0062.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m212_MA2332.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m326_MA0761.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m66_MA0474.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m327_MA0762.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m325_MA1484.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m324_MA0098.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m345_MA0475.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m332_MA0763.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m310_MA0760.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m344_MA0156.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m333_MA0764.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m334_MA0765.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m292_MA0028.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m304_MA0759.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_43/cluster_10_node_43_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_43/cluster_10_node_43_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_43/cluster_10_node_43_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_31/cluster_1_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223725_GPhDKx


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_43/cluster_10_nb_motifs_25.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223726_gxaciu


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_31/cluster_1_node_31_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_43/cluster_10_node_43_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m611_MA0072.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m4_MA0071.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m612_MA1150.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m613_MA1151.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m135_MA1540.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m321_MA0592.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m322_MA0141.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_23/cluster_12_node_23_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m547_MA1535.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m549_MA1536.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m552_MA1111.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m555_MA1112.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m556_MA0160.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m611_MA0072.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m4_MA0071.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m612_MA1150.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m613_MA1151.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m135_MA1540.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m321_MA0592.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m322_MA0141.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_24/cluster_12_node_24_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_23/cluster_12_node_23_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_23/cluster_12_node_23_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_24/cluster_12_node_24_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_24/cluster_12_node_24_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_23/cluster_12_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223728_qR9Mbf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_24/cluster_12_nb_motifs_12.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223728_kRV6Fs


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_23/cluster_12_node_23_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_24/cluster_12_node_24_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m245_MA1928.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m240_MA0835.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m237_MA1634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m238_MA0462.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m231_MA1101.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m348_MA0476.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m362_MA1142.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m464_MA1132.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m352_MA1134.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m369_MA1144.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m358_MA1135.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m367_MA1138.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m355_MA1141.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m360_MA1128.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m361_MA1137.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m350_MA0099.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m365_MA1130.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m202_MA1633.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m38_MA0655.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m359_MA0477.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m354_MA0490.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m357_MA0491.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m364_MA0478.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m487_MA0841.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m485_MA1520.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m488_MA1521.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m230_MA0496.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m13_MA0150.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m486_MA0501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m490_MA0089.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_32/cluster_1_node_32_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_32/cluster_1_node_32_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_32/cluster_1_node_32_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_32/cluster_1_nb_motifs_30.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223730_Nqgwcq


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_32/cluster_1_node_32_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m19_MA0489.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m245_MA1928.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m240_MA0835.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m237_MA1634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m238_MA0462.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m231_MA1101.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m348_MA0476.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m362_MA1142.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m464_MA1132.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m352_MA1134.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m369_MA1144.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m358_MA1135.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m367_MA1138.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m355_MA1141.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m360_MA1128.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m361_MA1137.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m350_MA0099.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m365_MA1130.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m202_MA1633.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m38_MA0655.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m359_MA0477.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m354_MA0490.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m357_MA0491.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m364_MA0478.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m487_MA0841.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m485_MA1520.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m488_MA1521.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m230_MA0496.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m13_MA0150.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m486_MA0501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m490_MA0089.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_33/cluster_1_node_33_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_33/cluster_1_node_33_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_33/cluster_1_node_33_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_33/cluster_1_nb_motifs_31.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223731_FHX1e5


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_33/cluster_1_node_33_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m122_MA1421.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m67_MA0768.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m654_MA0769.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m655_MA0523.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_25/cluster_12_node_25_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_25/cluster_12_node_25_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_25/cluster_12_node_25_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_25/cluster_12_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223732_BRUuHv


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_25/cluster_12_node_25_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m2_MA0065.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m8_MA0115.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m591_MA1148.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m424_MA1494.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m551_MA1537.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m675_MA1574.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m548_MA0504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m592_MA1550.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m104_MA0855.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m105_MA0856.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m122_MA1421.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m67_MA0768.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m654_MA0769.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m655_MA0523.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_26/cluster_12_node_26_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m803_MA2542.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m203_MA2324.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m766_MA2504.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m547_MA1535.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m549_MA1536.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m552_MA1111.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m555_MA1112.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m556_MA0160.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m611_MA0072.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m4_MA0071.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m612_MA1150.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m613_MA1151.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m135_MA1540.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m321_MA0592.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m322_MA0141.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_27/cluster_12_node_27_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_26/cluster_12_node_26_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_26/cluster_12_node_26_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_27/cluster_12_node_27_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_27/cluster_12_node_27_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m2_MA0065.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m8_MA0115.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m591_MA1148.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m424_MA1494.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m551_MA1537.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m675_MA1574.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m548_MA0504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m592_MA1550.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m104_MA0855.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m105_MA0856.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m122_MA1421.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m67_MA0768.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m654_MA0769.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m655_MA0523.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m803_MA2542.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m203_MA2324.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m766_MA2504.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m547_MA1535.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m549_MA1536.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m552_MA1111.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m555_MA1112.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m556_MA0160.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m611_MA0072.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m4_MA0071.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m612_MA1150.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m613_MA1151.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m135_MA1540.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m321_MA0592.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m322_MA0141.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_28/cluster_12_node_28_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_28/cluster_12_node_28_cat.tf -v 0 -in_format tf -out_format tf -id cluster_12 -name cluster_12 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_28/cluster_12_node_28_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_26/cluster_12_nb_motifs_14.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223735_Sipybi


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_27/cluster_12_nb_motifs_15.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223735_cb6SLE


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_28/cluster_12_nb_motifs_29.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223735_aBULMm


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_26/cluster_12_node_26_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_27/cluster_12_node_27_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_12/merged_consensuses/node_28/cluster_12_node_28_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m639_MA0081.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m640_MA0687.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_44/cluster_10_node_44_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_44/cluster_10_node_44_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_44/cluster_10_node_44_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_44/cluster_10_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223737_dpOCgU


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_44/cluster_10_node_44_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m455_MA1508.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m338_MA1947.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m313_MA1935.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m330_MA1942.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m381_MA1952.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m347_MA1950.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m386_MA1954.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m387_MA1955.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m385_MA1953.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m388_MA1956.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m314_MA1936.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m337_MA1946.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_45/cluster_10_node_45_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_45/cluster_10_node_45_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_45/cluster_10_node_45_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_45/cluster_10_nb_motifs_12.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223740_erC693


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_45/cluster_10_node_45_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m696_MA0698.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m300_MA0686.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m855_MA2594.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_46/cluster_10_node_46_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_46/cluster_10_node_46_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_46/cluster_10_node_46_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_46/cluster_10_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223743_FzgKmm


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_46/cluster_10_node_46_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m639_MA0081.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m640_MA0687.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m455_MA1508.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m338_MA1947.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m313_MA1935.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m330_MA1942.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m381_MA1952.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m347_MA1950.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m386_MA1954.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m387_MA1955.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m385_MA1953.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m388_MA1956.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m314_MA1936.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m337_MA1946.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_47/cluster_10_node_47_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_47/cluster_10_node_47_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_47/cluster_10_node_47_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_47/cluster_10_nb_motifs_14.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223746_AmdgTI


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_47/cluster_10_node_47_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m571_MA0070.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m497_MA1639.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m498_MA1640.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m572_MA1113.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m19_MA0489.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m245_MA1928.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m240_MA0835.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m237_MA1634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m238_MA0462.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m231_MA1101.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m348_MA0476.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m362_MA1142.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m464_MA1132.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m352_MA1134.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m369_MA1144.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m358_MA1135.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m367_MA1138.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m355_MA1141.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m360_MA1128.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m361_MA1137.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m350_MA0099.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m365_MA1130.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m202_MA1633.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m38_MA0655.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m359_MA0477.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m354_MA0490.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m357_MA0491.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m364_MA0478.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m487_MA0841.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m485_MA1520.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m488_MA1521.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m230_MA0496.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m13_MA0150.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m486_MA0501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m490_MA0089.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_34/cluster_1_node_34_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_34/cluster_1_node_34_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_34/cluster_1_node_34_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_34/cluster_1_nb_motifs_35.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223747_XT1tXK


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_34/cluster_1_node_34_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m710_MA1709.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m639_MA0081.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m640_MA0687.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m455_MA1508.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m338_MA1947.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m313_MA1935.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m330_MA1942.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m381_MA1952.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m347_MA1950.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m386_MA1954.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m387_MA1955.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m385_MA1953.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m388_MA1956.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m314_MA1936.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m337_MA1946.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_48/cluster_10_node_48_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_48/cluster_10_node_48_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_48/cluster_10_node_48_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_48/cluster_10_nb_motifs_15.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223748_hm5HEU


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_48/cluster_10_node_48_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m331_MA1943.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m296_MA1932.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m315_MA1937.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m451_MA1958.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m339_MA1948.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m328_MA1940.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m335_MA1944.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m173_MA1957.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m172_MA1931.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m346_MA1949.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_49/cluster_10_node_49_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_49/cluster_10_node_49_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_49/cluster_10_node_49_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_49/cluster_10_nb_motifs_10.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223750_CjOClZ


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_49/cluster_10_node_49_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m289_MA0473.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m288_MA0598.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m291_MA0640.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m294_MA1708.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m341_MA0645.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m209_MA2329.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m305_MA0076.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m30_MA0641.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m290_MA1483.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m31_MA0136.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m391_MA0062.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m212_MA2332.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m326_MA0761.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m66_MA0474.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m327_MA0762.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m325_MA1484.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m324_MA0098.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m345_MA0475.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m332_MA0763.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m310_MA0760.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m344_MA0156.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m333_MA0764.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m334_MA0765.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m292_MA0028.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m304_MA0759.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m696_MA0698.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m300_MA0686.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m855_MA2594.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_50/cluster_10_node_50_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_50/cluster_10_node_50_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_50/cluster_10_node_50_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_50/cluster_10_nb_motifs_28.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223753_NhrFsi


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_50/cluster_10_node_50_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m710_MA1709.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m639_MA0081.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m640_MA0687.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m455_MA1508.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m338_MA1947.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m313_MA1935.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m330_MA1942.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m381_MA1952.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m347_MA1950.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m386_MA1954.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m387_MA1955.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m385_MA1953.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m388_MA1956.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m314_MA1936.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m337_MA1946.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m289_MA0473.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m288_MA0598.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m291_MA0640.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m294_MA1708.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m341_MA0645.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m209_MA2329.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m305_MA0076.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m30_MA0641.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m290_MA1483.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m31_MA0136.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m391_MA0062.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m212_MA2332.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m326_MA0761.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m66_MA0474.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m327_MA0762.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m325_MA1484.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m324_MA0098.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m345_MA0475.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m332_MA0763.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m310_MA0760.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m344_MA0156.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m333_MA0764.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m334_MA0765.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m292_MA0028.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m304_MA0759.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m696_MA0698.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m300_MA0686.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m855_MA2594.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_51/cluster_10_node_51_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_51/cluster_10_node_51_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_51/cluster_10_node_51_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_51/cluster_10_nb_motifs_43.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223754_CNfooV


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_51/cluster_10_node_51_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m317_MA1938.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_120/cluster_120_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_120/cluster_120_matrices_temp.tf -from tf -to tf  -attr name cluster_120 -attr accession cluster_120 -set_attr merged_AC 'jaspar_2026_core:::MA1938.2.ERF::NHLH1' -set_attr merged_ID 'MA1938.2.ERF::NHLH1' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_120/cluster_120_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_120/cluster_120_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m115_MA1155.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_121/cluster_121_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_121/cluster_121_matrices_temp.tf -from tf -to tf  -attr name cluster_121 -attr accession cluster_121 -set_attr merged_AC 'jaspar_2026_core:::MA1155.1.ZSCAN4' -set_attr merged_ID 'MA1155.1.ZSCAN4' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_121/cluster_121_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_121/cluster_121_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m732_MA1978.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_122/cluster_122_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_122/cluster_122_matrices_temp.tf -from tf -to tf  -attr name cluster_122 -attr accession cluster_122 -set_attr merged_AC 'jaspar_2026_core:::MA1978.2.ZNF354A' -set_attr merged_ID 'MA1978.2.ZNF354A' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_122/cluster_122_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_122/cluster_122_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m761_MA1719.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_123/cluster_123_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_123/cluster_123_matrices_temp.tf -from tf -to tf  -attr name cluster_123 -attr accession cluster_123 -set_attr merged_AC 'jaspar_2026_core:::MA1719.2.ZNF816' -set_attr merged_ID 'MA1719.2.ZNF816' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_123/cluster_123_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_123/cluster_123_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m792_MA2531.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_124/cluster_124_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_124/cluster_124_matrices_temp.tf -from tf -to tf  -attr name cluster_124 -attr accession cluster_124 -set_attr merged_AC 'jaspar_2026_core:::MA2531.1.ZNF775' -set_attr merged_ID 'MA2531.1.ZNF775' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_124/cluster_124_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_124/cluster_124_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m214_MA2334.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_125/cluster_125_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_125/cluster_125_matrices_temp.tf -from tf -to tf  -attr name cluster_125 -attr accession cluster_125 -set_attr merged_AC 'jaspar_2026_core:::MA2334.1.ZNF547' -set_attr merged_ID 'MA2334.1.ZNF547' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_125/cluster_125_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_125/cluster_125_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m165_MA2100.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_126/cluster_126_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_126/cluster_126_matrices_temp.tf -from tf -to tf  -attr name cluster_126 -attr accession cluster_126 -set_attr merged_AC 'jaspar_2026_core:::MA2100.1.ZSCAN16' -set_attr merged_ID 'MA2100.1.ZSCAN16' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_126/cluster_126_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m331_MA1943.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m296_MA1932.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m315_MA1937.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m451_MA1958.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m339_MA1948.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m328_MA1940.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m335_MA1944.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m173_MA1957.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m172_MA1931.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m346_MA1949.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m710_MA1709.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m639_MA0081.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m640_MA0687.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m455_MA1508.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m338_MA1947.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m313_MA1935.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m330_MA1942.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m381_MA1952.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m347_MA1950.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m386_MA1954.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m387_MA1955.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m385_MA1953.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m388_MA1956.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m314_MA1936.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m337_MA1946.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m289_MA0473.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m288_MA0598.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m291_MA0640.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m294_MA1708.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m341_MA0645.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m209_MA2329.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m305_MA0076.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m30_MA0641.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m290_MA1483.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m31_MA0136.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m391_MA0062.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m212_MA2332.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m326_MA0761.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m66_MA0474.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m327_MA0762.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m325_MA1484.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m324_MA0098.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m345_MA0475.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m332_MA0763.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m310_MA0760.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m344_MA0156.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m333_MA0764.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m334_MA0765.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m292_MA0028.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m304_MA0759.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m696_MA0698.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m300_MA0686.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m855_MA2594.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_52/cluster_10_node_52_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_52/cluster_10_node_52_cat.tf -v 0 -in_format tf -out_format tf -id cluster_10 -name cluster_10 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_52/cluster_10_node_52_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_126/cluster_126_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_52/cluster_10_nb_motifs_53.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223802_Uur6Fi


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_10/merged_consensuses/node_52/cluster_10_node_52_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m723_MA1592.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m571_MA0070.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m497_MA1639.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m498_MA1640.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m572_MA1113.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m19_MA0489.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m245_MA1928.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m240_MA0835.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m237_MA1634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m238_MA0462.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m231_MA1101.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m348_MA0476.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m362_MA1142.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m464_MA1132.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m352_MA1134.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m369_MA1144.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m358_MA1135.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m367_MA1138.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m355_MA1141.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m360_MA1128.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m361_MA1137.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m350_MA0099.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m365_MA1130.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m202_MA1633.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m38_MA0655.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m359_MA0477.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m354_MA0490.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m357_MA0491.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m364_MA0478.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m487_MA0841.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m485_MA1520.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m488_MA1521.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m230_MA0496.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m13_MA0150.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m486_MA0501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m490_MA0089.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_35/cluster_1_node_35_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_35/cluster_1_node_35_cat.tf -v 0 -in_format tf -out_format tf -id cluster_1 -name cluster_1 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_35/cluster_1_node_35_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_35/cluster_1_nb_motifs_36.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223804_ylzZHt


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_1/merged_consensuses/node_35/cluster_1_node_35_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m785_MA2524.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_127/cluster_127_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_127/cluster_127_matrices_temp.tf -from tf -to tf  -attr name cluster_127 -attr accession cluster_127 -set_attr merged_AC 'jaspar_2026_core:::MA2524.1.ZNF696' -set_attr merged_ID 'MA2524.1.ZNF696' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_127/cluster_127_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_127/cluster_127_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m747_MA2497.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_128/cluster_128_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_128/cluster_128_matrices_temp.tf -from tf -to tf  -attr name cluster_128 -attr accession cluster_128 -set_attr merged_AC 'jaspar_2026_core:::MA2497.1.ZNF623' -set_attr merged_ID 'MA2497.1.ZNF623' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_128/cluster_128_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_128/cluster_128_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m765_MA1722.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_129/cluster_129_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_129/cluster_129_matrices_temp.tf -from tf -to tf  -attr name cluster_129 -attr accession cluster_129 -set_attr merged_AC 'jaspar_2026_core:::MA1722.2.ZSCAN31' -set_attr merged_ID 'MA1722.2.ZSCAN31' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_129/cluster_129_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_129/cluster_129_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m584_MA0790.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m586_MA0791.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_1/cluster_13_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m35_MA0153.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m423_MA0046.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_2/cluster_13_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m47_MA0680.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m75_MA0780.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_3/cluster_13_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_1/cluster_13_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_13 -name cluster_13 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_1/cluster_13_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_3/cluster_13_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_13 -name cluster_13 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_3/cluster_13_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_2/cluster_13_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_13 -name cluster_13 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_2/cluster_13_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_2/cluster_13_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223812_jzE4FY


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_1/cluster_13_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223812_nyUIuK


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_3/cluster_13_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223812_7bh4AS


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_3/cluster_13_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_2/cluster_13_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_1/cluster_13_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m265_MA0754.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m267_MA0755.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_4/cluster_13_node_4_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m560_MA0679.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m265_MA0754.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m267_MA0755.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_5/cluster_13_node_5_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_4/cluster_13_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_13 -name cluster_13 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_4/cluster_13_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_5/cluster_13_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_13 -name cluster_13 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_5/cluster_13_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_4/cluster_13_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223814_0wAc6g


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_5/cluster_13_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223814_NDw6Az


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_4/cluster_13_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_5/cluster_13_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m279_MA0756.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m560_MA0679.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m265_MA0754.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m267_MA0755.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_6/cluster_13_node_6_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_6/cluster_13_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_13 -name cluster_13 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_6/cluster_13_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_6/cluster_13_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223817_kPRmhP


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_6/cluster_13_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m585_MA0683.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m584_MA0790.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m586_MA0791.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_7/cluster_13_node_7_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_7/cluster_13_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_13 -name cluster_13 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_7/cluster_13_node_7_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_7/cluster_13_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223820_7bY1YZ


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_7/cluster_13_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m171_MA2102.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m47_MA0680.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m75_MA0780.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_8/cluster_13_node_8_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_8/cluster_13_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_13 -name cluster_13 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_8/cluster_13_node_8_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_8/cluster_13_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223822_QxxNFI


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_8/cluster_13_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m279_MA0756.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m560_MA0679.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m265_MA0754.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m267_MA0755.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m171_MA2102.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m47_MA0680.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m75_MA0780.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_9/cluster_13_node_9_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_9/cluster_13_node_9_cat.tf -v 0 -in_format tf -out_format tf -id cluster_13 -name cluster_13 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_9/cluster_13_node_9_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_9/cluster_13_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223823_6yJXyr


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_9/cluster_13_node_9_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m236_MA1471.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m868_MA2675.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_10/cluster_13_node_10_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_10/cluster_13_node_10_cat.tf -v 0 -in_format tf -out_format tf -id cluster_13 -name cluster_13 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_10/cluster_13_node_10_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_10/cluster_13_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223824_iwTGTB


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_10/cluster_13_node_10_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m861_MA2600.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m236_MA1471.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m868_MA2675.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_11/cluster_13_node_11_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_11/cluster_13_node_11_cat.tf -v 0 -in_format tf -out_format tf -id cluster_13 -name cluster_13 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_11/cluster_13_node_11_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_11/cluster_13_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223827_dsgRKc


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_11/cluster_13_node_11_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m35_MA0153.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m423_MA0046.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m585_MA0683.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m584_MA0790.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m586_MA0791.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_12/cluster_13_node_12_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_12/cluster_13_node_12_cat.tf -v 0 -in_format tf -out_format tf -id cluster_13 -name cluster_13 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_12/cluster_13_node_12_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_12/cluster_13_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223828_fdcM2k


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_12/cluster_13_node_12_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m561_MA0757.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m279_MA0756.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m560_MA0679.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m265_MA0754.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m267_MA0755.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m171_MA2102.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m47_MA0680.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m75_MA0780.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_13/cluster_13_node_13_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m861_MA2600.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m236_MA1471.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m868_MA2675.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m561_MA0757.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m279_MA0756.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m560_MA0679.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m265_MA0754.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m267_MA0755.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m171_MA2102.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m47_MA0680.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m75_MA0780.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_14/cluster_13_node_14_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_13/cluster_13_node_13_cat.tf -v 0 -in_format tf -out_format tf -id cluster_13 -name cluster_13 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_13/cluster_13_node_13_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_14/cluster_13_node_14_cat.tf -v 0 -in_format tf -out_format tf -id cluster_13 -name cluster_13 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_14/cluster_13_node_14_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_13/cluster_13_nb_motifs_8.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223833_MPECRg


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_14/cluster_13_nb_motifs_11.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223833_BldopE


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_13/cluster_13_node_13_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_14/cluster_13_node_14_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m35_MA0153.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m423_MA0046.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m585_MA0683.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m584_MA0790.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m586_MA0791.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m861_MA2600.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m236_MA1471.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m868_MA2675.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m561_MA0757.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m279_MA0756.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m560_MA0679.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m265_MA0754.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m267_MA0755.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m171_MA2102.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m47_MA0680.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m75_MA0780.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_15/cluster_13_node_15_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_15/cluster_13_node_15_cat.tf -v 0 -in_format tf -out_format tf -id cluster_13 -name cluster_13 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_15/cluster_13_node_15_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_15/cluster_13_nb_motifs_16.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223834_fWHO6Z


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_13/merged_consensuses/node_15/cluster_13_node_15_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m163_MA2099.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_130/cluster_130_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m824_MA2563.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_131/cluster_131_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_130/cluster_130_matrices_temp.tf -from tf -to tf  -attr name cluster_130 -attr accession cluster_130 -set_attr merged_AC 'jaspar_2026_core:::MA2099.1.ZNF770' -set_attr merged_ID 'MA2099.1.ZNF770' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_130/cluster_130_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_131/cluster_131_matrices_temp.tf -from tf -to tf  -attr name cluster_131 -attr accession cluster_131 -set_attr merged_AC 'jaspar_2026_core:::MA2563.1.TIGD7' -set_attr merged_ID 'MA2563.1.TIGD7' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_131/cluster_131_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_131/cluster_131_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_130/cluster_130_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m889_MA1589.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_132/cluster_132_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_132/cluster_132_matrices_temp.tf -from tf -to tf  -attr name cluster_132 -attr accession cluster_132 -set_attr merged_AC 'jaspar_2026_core:::MA1589.3.ZNF140' -set_attr merged_ID 'MA1589.3.ZNF140' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_132/cluster_132_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_132/cluster_132_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m420_MA0131.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_133/cluster_133_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m403_MA0038.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_134/cluster_134_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_133/cluster_133_matrices_temp.tf -from tf -to tf  -attr name cluster_133 -attr accession cluster_133 -set_attr merged_AC 'jaspar_2026_core:::MA0131.3.HINFP' -set_attr merged_ID 'MA0131.3.HINFP' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_133/cluster_133_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_134/cluster_134_matrices_temp.tf -from tf -to tf  -attr name cluster_134 -attr accession cluster_134 -set_attr merged_AC 'jaspar_2026_core:::MA0038.3.GFI1' -set_attr merged_ID 'MA0038.3.GFI1' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_134/cluster_134_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_134/cluster_134_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_133/cluster_133_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m705_MA2490.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_135/cluster_135_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_135/cluster_135_matrices_temp.tf -from tf -to tf  -attr name cluster_135 -attr accession cluster_135 -set_attr merged_AC 'jaspar_2026_core:::MA2490.1.ZFP3' -set_attr merged_ID 'MA2490.1.ZFP3' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_135/cluster_135_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_135/cluster_135_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m847_MA2586.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_136/cluster_136_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m170_MA0080.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_137/cluster_137_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_136/cluster_136_matrices_temp.tf -from tf -to tf  -attr name cluster_136 -attr accession cluster_136 -set_attr merged_AC 'jaspar_2026_core:::MA2586.1.ZNF518B' -set_attr merged_ID 'MA2586.1.ZNF518B' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_136/cluster_136_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_137/cluster_137_matrices_temp.tf -from tf -to tf  -attr name cluster_137 -attr accession cluster_137 -set_attr merged_AC 'jaspar_2026_core:::MA0080.5.SPI1' -set_attr merged_ID 'MA0080.5.SPI1' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_137/cluster_137_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_137/cluster_137_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_136/cluster_136_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m794_MA2533.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_138/cluster_138_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_138/cluster_138_matrices_temp.tf -from tf -to tf  -attr name cluster_138 -attr accession cluster_138 -set_attr merged_AC 'jaspar_2026_core:::MA2533.1.ZNF814' -set_attr merged_ID 'MA2533.1.ZNF814' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_138/cluster_138_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_138/cluster_138_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m753_MA1600.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_139/cluster_139_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_139/cluster_139_matrices_temp.tf -from tf -to tf  -attr name cluster_139 -attr accession cluster_139 -set_attr merged_AC 'jaspar_2026_core:::MA1600.2.ZNF684' -set_attr merged_ID 'MA1600.2.ZNF684' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_139/cluster_139_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_139/cluster_139_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m580_MA0785.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m80_MA0792.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_1/cluster_14_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m79_MA0789.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m580_MA0785.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m80_MA0792.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_2/cluster_14_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m582_MA0627.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m79_MA0789.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m580_MA0785.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m80_MA0792.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_3/cluster_14_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_1/cluster_14_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_14 -name cluster_14 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_1/cluster_14_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_2/cluster_14_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_14 -name cluster_14 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_2/cluster_14_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_3/cluster_14_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_14 -name cluster_14 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_3/cluster_14_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_2/cluster_14_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223851_CFZBo4


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_1/cluster_14_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223851_0nfqQC


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_3/cluster_14_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223851_7c9z7U


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_3/cluster_14_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_1/cluster_14_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_2/cluster_14_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m607_MA0799.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_140/cluster_140_matrices_temp.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m77_MA0787.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m78_MA0788.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_4/cluster_14_node_4_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_140/cluster_140_matrices_temp.tf -from tf -to tf  -attr name cluster_140 -attr accession cluster_140 -set_attr merged_AC 'jaspar_2026_core:::MA0799.3.RFX4' -set_attr merged_ID 'MA0799.3.RFX4' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_140/cluster_140_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_4/cluster_14_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_14 -name cluster_14 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_4/cluster_14_node_4_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_140/cluster_140_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_4/cluster_14_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223854_RSHlxt


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_4/cluster_14_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m719_MA1974.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_141/cluster_141_matrices_temp.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m579_MA0784.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m581_MA0507.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_5/cluster_14_node_5_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_141/cluster_141_matrices_temp.tf -from tf -to tf  -attr name cluster_141 -attr accession cluster_141 -set_attr merged_AC 'jaspar_2026_core:::MA1974.2.ZNF211' -set_attr merged_ID 'MA1974.2.ZNF211' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_141/cluster_141_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_5/cluster_14_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_14 -name cluster_14 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_5/cluster_14_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_5/cluster_14_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223855_YlvBuL


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_141/cluster_141_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_5/cluster_14_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m835_MA2574.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_142/cluster_142_matrices_temp.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m583_MA0786.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m582_MA0627.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m79_MA0789.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m580_MA0785.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m80_MA0792.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_6/cluster_14_node_6_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_142/cluster_142_matrices_temp.tf -from tf -to tf  -attr name cluster_142 -attr accession cluster_142 -set_attr merged_AC 'jaspar_2026_core:::MA2574.1.ZNF878' -set_attr merged_ID 'MA2574.1.ZNF878' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_142/cluster_142_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_6/cluster_14_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_14 -name cluster_14 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_6/cluster_14_node_6_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_142/cluster_142_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_6/cluster_14_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223856_mYxNqS


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_6/cluster_14_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m817_MA2556.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_143/cluster_143_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_143/cluster_143_matrices_temp.tf -from tf -to tf  -attr name cluster_143 -attr accession cluster_143 -set_attr merged_AC 'jaspar_2026_core:::MA2556.1.ZNF510' -set_attr merged_ID 'MA2556.1.ZNF510' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_143/cluster_143_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m77_MA0787.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m78_MA0788.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m579_MA0784.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m581_MA0507.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_7/cluster_14_node_7_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_7/cluster_14_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_14 -name cluster_14 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_7/cluster_14_node_7_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_7/cluster_14_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223857_5VyZ3j


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_143/cluster_143_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_7/cluster_14_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m808_MA2547.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_144/cluster_144_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m883_MA2690.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_145/cluster_145_matrices_temp.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m587_MA1115.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m583_MA0786.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m582_MA0627.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m79_MA0789.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m580_MA0785.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m80_MA0792.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_8/cluster_14_node_8_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_144/cluster_144_matrices_temp.tf -from tf -to tf  -attr name cluster_144 -attr accession cluster_144 -set_attr merged_AC 'jaspar_2026_core:::MA2547.1.ZNF215' -set_attr merged_ID 'MA2547.1.ZNF215' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_144/cluster_144_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_145/cluster_145_matrices_temp.tf -from tf -to tf  -attr name cluster_145 -attr accession cluster_145 -set_attr merged_AC 'jaspar_2026_core:::MA2690.1.ZNF724' -set_attr merged_ID 'MA2690.1.ZNF724' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_145/cluster_145_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_8/cluster_14_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_14 -name cluster_14 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_8/cluster_14_node_8_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_144/cluster_144_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_8/cluster_14_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223858_WggDVk


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_145/cluster_145_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_8/cluster_14_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m821_MA2560.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_146/cluster_146_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m818_MA2557.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_147/cluster_147_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_147/cluster_147_matrices_temp.tf -from tf -to tf  -attr name cluster_147 -attr accession cluster_147 -set_attr merged_AC 'jaspar_2026_core:::MA2557.1.ZGLP1' -set_attr merged_ID 'MA2557.1.ZGLP1' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_147/cluster_147_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m77_MA0787.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m78_MA0788.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m579_MA0784.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m581_MA0507.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m587_MA1115.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m583_MA0786.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m582_MA0627.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m79_MA0789.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m580_MA0785.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m80_MA0792.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_9/cluster_14_node_9_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_146/cluster_146_matrices_temp.tf -from tf -to tf  -attr name cluster_146 -attr accession cluster_146 -set_attr merged_AC 'jaspar_2026_core:::MA2560.1.POGK' -set_attr merged_ID 'MA2560.1.POGK' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_146/cluster_146_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_9/cluster_14_node_9_cat.tf -v 0 -in_format tf -out_format tf -id cluster_14 -name cluster_14 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_9/cluster_14_node_9_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_147/cluster_147_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_146/cluster_146_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_9/cluster_14_nb_motifs_10.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223859_nukLco


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_9/cluster_14_node_9_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m739_MA1712.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_148/cluster_148_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m232_MA1470.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_149/cluster_149_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_148/cluster_148_matrices_temp.tf -from tf -to tf  -attr name cluster_148 -attr accession cluster_148 -set_attr merged_AC 'jaspar_2026_core:::MA1712.2.ZNF454' -set_attr merged_ID 'MA1712.2.ZNF454' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_148/cluster_148_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_149/cluster_149_matrices_temp.tf -from tf -to tf  -attr name cluster_149 -attr accession cluster_149 -set_attr merged_AC 'jaspar_2026_core:::MA1470.2.BACH2' -set_attr merged_ID 'MA1470.2.BACH2' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_149/cluster_149_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_149/cluster_149_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_148/cluster_148_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m816_MA2555.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_150/cluster_150_matrices_temp.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m141_MA1571.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m142_MA1572.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_1/cluster_15_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m83_MA0796.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m84_MA0797.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_2/cluster_15_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m141_MA1571.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m142_MA1572.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m83_MA0796.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m84_MA0797.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_3/cluster_15_node_3_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_150/cluster_150_matrices_temp.tf -from tf -to tf  -attr name cluster_150 -attr accession cluster_150 -set_attr merged_AC 'jaspar_2026_core:::MA2555.1.ZNF493' -set_attr merged_ID 'MA2555.1.ZNF493' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_150/cluster_150_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_1/cluster_15_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_15 -name cluster_15 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_1/cluster_15_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_2/cluster_15_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_15 -name cluster_15 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_2/cluster_15_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_3/cluster_15_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_15 -name cluster_15 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_3/cluster_15_node_3_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_150/cluster_150_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_3/cluster_15_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223901_JpKdEO


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_1/cluster_15_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223901_VFrij4


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_2/cluster_15_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223901_9W9AjH


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_1/cluster_15_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_3/cluster_15_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_2/cluster_15_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m211_MA2331.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_151/cluster_151_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_151/cluster_151_matrices_temp.tf -from tf -to tf  -attr name cluster_151 -attr accession cluster_151 -set_attr merged_AC 'jaspar_2026_core:::MA2331.1.ZNF157' -set_attr merged_ID 'MA2331.1.ZNF157' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_151/cluster_151_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_151/cluster_151_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m174_MA1962.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m77_MA0787.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m78_MA0788.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m579_MA0784.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m581_MA0507.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m587_MA1115.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m583_MA0786.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m582_MA0627.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m79_MA0789.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m580_MA0785.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m80_MA0792.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_10/cluster_14_node_10_cat.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m806_MA2545.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_152/cluster_152_matrices_temp.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_10/cluster_14_node_10_cat.tf -v 0 -in_format tf -out_format tf -id cluster_14 -name cluster_14 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_10/cluster_14_node_10_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m76_MA0783.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m141_MA1571.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m142_MA1572.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m83_MA0796.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m84_MA0797.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_4/cluster_15_node_4_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_152/cluster_152_matrices_temp.tf -from tf -to tf  -attr name cluster_152 -attr accession cluster_152 -set_attr merged_AC 'jaspar_2026_core:::MA2545.1.ZNF57' -set_attr merged_ID 'MA2545.1.ZNF57' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_152/cluster_152_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_4/cluster_15_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_15 -name cluster_15 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_4/cluster_15_node_4_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_152/cluster_152_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_10/cluster_14_nb_motifs_11.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223903_U3plRw


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_4/cluster_15_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223903_BpuUan


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_4/cluster_15_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_14/merged_consensuses/node_10/cluster_14_node_10_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m774_MA2513.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_153/cluster_153_matrices_temp.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m127_MA1485.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m76_MA0783.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m141_MA1571.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m142_MA1572.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m83_MA0796.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m84_MA0797.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_5/cluster_15_node_5_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_153/cluster_153_matrices_temp.tf -from tf -to tf  -attr name cluster_153 -attr accession cluster_153 -set_attr merged_AC 'jaspar_2026_core:::MA2513.1.FLYWCH1' -set_attr merged_ID 'MA2513.1.FLYWCH1' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_153/cluster_153_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_5/cluster_15_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_15 -name cluster_15 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_5/cluster_15_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_5/cluster_15_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223904_BmvXpT


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_153/cluster_153_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_15/merged_consensuses/node_5/cluster_15_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m393_MA0140.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_154/cluster_154_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_154/cluster_154_matrices_temp.tf -from tf -to tf  -attr name cluster_154 -attr accession cluster_154 -set_attr merged_AC 'jaspar_2026_core:::MA0140.3.GATA1::TAL1' -set_attr merged_ID 'MA0140.3.GATA1::TAL1' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_154/cluster_154_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_154/cluster_154_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m744_MA1983.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_155/cluster_155_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_155/cluster_155_matrices_temp.tf -from tf -to tf  -attr name cluster_155 -attr accession cluster_155 -set_attr merged_AC 'jaspar_2026_core:::MA1983.2.ZNF582' -set_attr merged_ID 'MA1983.2.ZNF582' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_155/cluster_155_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_155/cluster_155_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m109_MA0863.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_156/cluster_156_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_156/cluster_156_matrices_temp.tf -from tf -to tf  -attr name cluster_156 -attr accession cluster_156 -set_attr merged_AC 'jaspar_2026_core:::MA0863.1.MTF1' -set_attr merged_ID 'MA0863.1.MTF1' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_156/cluster_156_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_156/cluster_156_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m731_MA1711.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_157/cluster_157_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_157/cluster_157_matrices_temp.tf -from tf -to tf  -attr name cluster_157 -attr accession cluster_157 -set_attr merged_AC 'jaspar_2026_core:::MA1711.2.ZNF343' -set_attr merged_ID 'MA1711.2.ZNF343' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_157/cluster_157_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_157/cluster_157_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m176_MA1980.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_158/cluster_158_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_158/cluster_158_matrices_temp.tf -from tf -to tf  -attr name cluster_158 -attr accession cluster_158 -set_attr merged_AC 'jaspar_2026_core:::MA1980.1.ZNF418' -set_attr merged_ID 'MA1980.1.ZNF418' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_158/cluster_158_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_158/cluster_158_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m605_MA0138.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_159/cluster_159_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_159/cluster_159_matrices_temp.tf -from tf -to tf  -attr name cluster_159 -attr accession cluster_159 -set_attr merged_AC 'jaspar_2026_core:::MA0138.3.REST' -set_attr merged_ID 'MA0138.3.REST' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_159/cluster_159_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_159/cluster_159_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m779_MA2518.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_160/cluster_160_matrices_temp.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m663_MA0812.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m666_MA1569.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_16/merged_consensuses/node_2/cluster_16_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m661_MA0003.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m665_MA0814.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_16/merged_consensuses/node_1/cluster_16_node_1_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_160/cluster_160_matrices_temp.tf -from tf -to tf  -attr name cluster_160 -attr accession cluster_160 -set_attr merged_AC 'jaspar_2026_core:::MA2518.1.ZNF551' -set_attr merged_ID 'MA2518.1.ZNF551' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_160/cluster_160_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m661_MA0003.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m665_MA0814.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m663_MA0812.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m666_MA1569.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_16/merged_consensuses/node_3/cluster_16_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_16/merged_consensuses/node_1/cluster_16_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_16 -name cluster_16 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_16/merged_consensuses/node_1/cluster_16_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_16/merged_consensuses/node_2/cluster_16_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_16 -name cluster_16 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_16/merged_consensuses/node_2/cluster_16_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_16/merged_consensuses/node_3/cluster_16_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_16 -name cluster_16 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_16/merged_consensuses/node_3/cluster_16_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_16/merged_consensuses/node_2/cluster_16_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223912_mfZE40


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_160/cluster_160_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_16/merged_consensuses/node_3/cluster_16_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223912_Zq20DH


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_16/merged_consensuses/node_1/cluster_16_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223912_ZEk4QB


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_16/merged_consensuses/node_3/cluster_16_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_16/merged_consensuses/node_2/cluster_16_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_16/merged_consensuses/node_1/cluster_16_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m880_MA2687.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_161/cluster_161_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_161/cluster_161_matrices_temp.tf -from tf -to tf  -attr name cluster_161 -attr accession cluster_161 -set_attr merged_AC 'jaspar_2026_core:::MA2687.1.ZNF251' -set_attr merged_ID 'MA2687.1.ZNF251' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_161/cluster_161_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_161/cluster_161_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m614_MA0073.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_162/cluster_162_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m768_MA2507.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_163/cluster_163_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_162/cluster_162_matrices_temp.tf -from tf -to tf  -attr name cluster_162 -attr accession cluster_162 -set_attr merged_AC 'jaspar_2026_core:::MA0073.2.RREB1' -set_attr merged_ID 'MA0073.2.RREB1' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_162/cluster_162_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_163/cluster_163_matrices_temp.tf -from tf -to tf  -attr name cluster_163 -attr accession cluster_163 -set_attr merged_AC 'jaspar_2026_core:::MA2507.1.NACC2' -set_attr merged_ID 'MA2507.1.NACC2' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_163/cluster_163_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_162/cluster_162_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_163/cluster_163_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m215_MA2335.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_164/cluster_164_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m777_MA2516.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_165/cluster_165_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_164/cluster_164_matrices_temp.tf -from tf -to tf  -attr name cluster_164 -attr accession cluster_164 -set_attr merged_AC 'jaspar_2026_core:::MA2335.1.ZNF558' -set_attr merged_ID 'MA2335.1.ZNF558' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_164/cluster_164_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_165/cluster_165_matrices_temp.tf -from tf -to tf  -attr name cluster_165 -attr accession cluster_165 -set_attr merged_AC 'jaspar_2026_core:::MA2516.1.ZSCAN2' -set_attr merged_ID 'MA2516.1.ZSCAN2' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_165/cluster_165_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_164/cluster_164_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_165/cluster_165_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m147_MA1594.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_166/cluster_166_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m737_MA2494.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_167/cluster_167_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_166/cluster_166_matrices_temp.tf -from tf -to tf  -attr name cluster_166 -attr accession cluster_166 -set_attr merged_AC 'jaspar_2026_core:::MA1594.1.ZNF382' -set_attr merged_ID 'MA1594.1.ZNF382' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_166/cluster_166_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_167/cluster_167_matrices_temp.tf -from tf -to tf  -attr name cluster_167 -attr accession cluster_167 -set_attr merged_AC 'jaspar_2026_core:::MA2494.1.ZNF436' -set_attr merged_ID 'MA2494.1.ZNF436' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_167/cluster_167_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_167/cluster_167_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_166/cluster_166_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m812_MA2551.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_168/cluster_168_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m782_MA2521.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_169/cluster_169_matrices_temp.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m87_MA0803.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m88_MA0805.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_1/cluster_17_node_1_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_169/cluster_169_matrices_temp.tf -from tf -to tf  -attr name cluster_169 -attr accession cluster_169 -set_attr merged_AC 'jaspar_2026_core:::MA2521.1.FIZ1' -set_attr merged_ID 'MA2521.1.FIZ1' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_169/cluster_169_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m433_MA1566.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m647_MA0802.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_2/cluster_17_node_2_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_168/cluster_168_matrices_temp.tf -from tf -to tf  -attr name cluster_168 -attr accession cluster_168 -set_attr merged_AC 'jaspar_2026_core:::MA2551.1.ZNF286B' -set_attr merged_ID 'MA2551.1.ZNF286B' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_168/cluster_168_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m89_MA0806.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m90_MA0807.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_3/cluster_17_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_1/cluster_17_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_17 -name cluster_17 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_1/cluster_17_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_2/cluster_17_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_17 -name cluster_17 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_2/cluster_17_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_3/cluster_17_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_17 -name cluster_17 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_3/cluster_17_node_3_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_168/cluster_168_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_3/cluster_17_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223918_xwViCG


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_169/cluster_169_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_1/cluster_17_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223918_pqt09H


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_2/cluster_17_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223918_kQ2BhZ


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_2/cluster_17_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_1/cluster_17_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_3/cluster_17_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m553_MA0113.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m554_MA0727.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_19/merged_consensuses/node_1/cluster_19_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m544_MA1146.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m557_MA1147.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_3/cluster_18_node_3_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m136_MA1555.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m137_MA1556.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_2/cluster_18_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m133_MA1538.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m134_MA1539.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_1/cluster_18_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m21_MA0007.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m553_MA0113.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m554_MA0727.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_19/merged_consensuses/node_2/cluster_19_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m207_MA2327.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m21_MA0007.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m553_MA0113.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m554_MA0727.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_19/merged_consensuses/node_3/cluster_19_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_19/merged_consensuses/node_1/cluster_19_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_19 -name cluster_19 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_19/merged_consensuses/node_1/cluster_19_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_3/cluster_18_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_18 -name cluster_18 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_3/cluster_18_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_1/cluster_18_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_18 -name cluster_18 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_1/cluster_18_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_2/cluster_18_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_18 -name cluster_18 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_2/cluster_18_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_19/merged_consensuses/node_2/cluster_19_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_19 -name cluster_19 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_19/merged_consensuses/node_2/cluster_19_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_19/merged_consensuses/node_3/cluster_19_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_19 -name cluster_19 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_19/merged_consensuses/node_3/cluster_19_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_19/merged_consensuses/node_1/cluster_19_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223919_yWSn2t


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_19/merged_consensuses/node_2/cluster_19_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223919_yfvM0H


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_3/cluster_18_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223919_uBmXqc


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_2/cluster_18_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223919_pxH9Yd


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_1/cluster_18_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223919_uxK49b


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_19/merged_consensuses/node_3/cluster_19_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223919_vhk2LO


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_19/merged_consensuses/node_2/cluster_19_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_3/cluster_18_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_19/merged_consensuses/node_1/cluster_19_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_19/merged_consensuses/node_3/cluster_19_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_1/cluster_18_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_2/cluster_18_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m599_MA1552.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m600_MA1553.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_4/cluster_18_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_4/cluster_18_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_18 -name cluster_18 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_4/cluster_18_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_4/cluster_18_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223920_7vfpB8


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_4/cluster_18_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m293_MA0800.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m433_MA1566.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m647_MA0802.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_4/cluster_17_node_4_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m136_MA1555.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m137_MA1556.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m599_MA1552.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m600_MA1553.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_5/cluster_18_node_5_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m133_MA1538.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m134_MA1539.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m544_MA1146.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m557_MA1147.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_6/cluster_18_node_6_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_4/cluster_17_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_17 -name cluster_17 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_4/cluster_17_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_6/cluster_18_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_18 -name cluster_18 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_6/cluster_18_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_5/cluster_18_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_18 -name cluster_18 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_5/cluster_18_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_5/cluster_18_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223921_S7CdH7


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_6/cluster_18_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223921_3JdhFW


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_4/cluster_17_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223921_b7ZpmG


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_5/cluster_18_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_6/cluster_18_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_4/cluster_17_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m113_MA1110.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m550_MA0017.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_7/cluster_18_node_7_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m86_MA0801.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m87_MA0803.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m88_MA0805.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_5/cluster_17_node_5_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_7/cluster_18_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_18 -name cluster_18 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_7/cluster_18_node_7_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_5/cluster_17_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_17 -name cluster_17 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_5/cluster_17_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_7/cluster_18_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223922_1ugEX9


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_5/cluster_17_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223922_tPt8pi


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_5/cluster_17_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_7/cluster_18_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m648_MA1565.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m293_MA0800.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m433_MA1566.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m647_MA0802.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_6/cluster_17_node_6_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m177_MA1985.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m136_MA1555.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m137_MA1556.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m599_MA1552.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m600_MA1553.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_9/cluster_18_node_9_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m133_MA1538.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m134_MA1539.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m544_MA1146.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m557_MA1147.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m113_MA1110.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m550_MA0017.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_8/cluster_18_node_8_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_6/cluster_17_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_17 -name cluster_17 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_6/cluster_17_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_9/cluster_18_node_9_cat.tf -v 0 -in_format tf -out_format tf -id cluster_18 -name cluster_18 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_9/cluster_18_node_9_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_8/cluster_18_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_18 -name cluster_18 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_8/cluster_18_node_8_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_9/cluster_18_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223923_xhCjNB


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_6/cluster_17_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223923_qNPOjc


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_8/cluster_18_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223923_7aaw7W


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_9/cluster_18_node_9_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_6/cluster_17_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_8/cluster_18_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m133_MA1538.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m134_MA1539.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m544_MA1146.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m557_MA1147.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m113_MA1110.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m550_MA0017.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m177_MA1985.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m136_MA1555.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m137_MA1556.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m599_MA1552.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m600_MA1553.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_10/cluster_18_node_10_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_10/cluster_18_node_10_cat.tf -v 0 -in_format tf -out_format tf -id cluster_18 -name cluster_18 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_10/cluster_18_node_10_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_10/cluster_18_nb_motifs_11.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223925_a8wanf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_18/merged_consensuses/node_10/cluster_18_node_10_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m650_MA0688.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m648_MA1565.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m293_MA0800.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m433_MA1566.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m647_MA0802.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_7/cluster_17_node_7_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_7/cluster_17_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_17 -name cluster_17 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_7/cluster_17_node_7_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_7/cluster_17_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223927_t8J9vE


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_7/cluster_17_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m89_MA0806.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m90_MA0807.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m86_MA0801.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m87_MA0803.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m88_MA0805.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_8/cluster_17_node_8_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_8/cluster_17_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_17 -name cluster_17 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_8/cluster_17_node_8_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_8/cluster_17_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223928_i2SDN5


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_8/cluster_17_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m425_MA0114.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m426_MA0484.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_1/cluster_2_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m120_MA0693.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m546_MA1534.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_2/cluster_2_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m767_MA2506.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m875_MA2682.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_3/cluster_2_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_1/cluster_2_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_2 -name cluster_2 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_1/cluster_2_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_2/cluster_2_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_2 -name cluster_2 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_2/cluster_2_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_3/cluster_2_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_2 -name cluster_2 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_3/cluster_2_node_3_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m49_MA0009.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m649_MA0804.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_9/cluster_17_node_9_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_9/cluster_17_node_9_cat.tf -v 0 -in_format tf -out_format tf -id cluster_17 -name cluster_17 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_9/cluster_17_node_9_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_3/cluster_2_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223929_fLeHI2


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_9/cluster_17_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223929_4KMuLU


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_1/cluster_2_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223929_Rasech


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_2/cluster_2_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223929_3lXeRR


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_1/cluster_2_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_9/cluster_17_node_9_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_3/cluster_2_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_2/cluster_2_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m120_MA0693.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m546_MA1534.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m767_MA2506.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m875_MA2682.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_4/cluster_2_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_4/cluster_2_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_2 -name cluster_2 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_4/cluster_2_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_4/cluster_2_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223930_Op0DRy


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_4/cluster_2_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m138_MA1557.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m82_MA0795.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_1/cluster_20_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m764_MA1602.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m846_MA2585.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_2/cluster_20_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m138_MA1557.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m82_MA0795.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m764_MA1602.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m846_MA2585.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_3/cluster_20_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_1/cluster_20_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_20 -name cluster_20 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_1/cluster_20_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_2/cluster_20_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_20 -name cluster_20 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_2/cluster_20_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_3/cluster_20_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_20 -name cluster_20 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_3/cluster_20_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_3/cluster_20_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223931_qk3YaQ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_1/cluster_20_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223931_asnacQ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_2/cluster_20_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223931_Ol9bRp


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_1/cluster_20_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_2/cluster_20_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_3/cluster_20_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m622_MA1964.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m698_MA1579.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_4/cluster_20_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_4/cluster_20_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_20 -name cluster_20 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_4/cluster_20_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_4/cluster_20_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223932_aH2YG3


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_4/cluster_20_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m139_MA1567.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m219_MA0690.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_10/cluster_17_node_10_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m425_MA0114.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m426_MA0484.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m120_MA0693.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m546_MA1534.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m767_MA2506.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m875_MA2682.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_5/cluster_2_node_5_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m138_MA1557.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m82_MA0795.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m764_MA1602.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m846_MA2585.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m622_MA1964.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m698_MA1579.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_5/cluster_20_node_5_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m700_MA2488.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m425_MA0114.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m426_MA0484.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m120_MA0693.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m546_MA1534.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m767_MA2506.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m875_MA2682.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_6/cluster_2_node_6_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_10/cluster_17_node_10_cat.tf -v 0 -in_format tf -out_format tf -id cluster_17 -name cluster_17 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_10/cluster_17_node_10_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_5/cluster_20_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_20 -name cluster_20 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_5/cluster_20_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_5/cluster_2_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_2 -name cluster_2 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_5/cluster_2_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_6/cluster_2_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_2 -name cluster_2 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_6/cluster_2_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_10/cluster_17_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223933_8sN90h


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_5/cluster_20_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223933_UnQgvR


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_6/cluster_2_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223933_eyY4AT


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_5/cluster_2_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223933_6mOyGJ


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_20/merged_consensuses/node_5/cluster_20_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_6/cluster_2_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_10/cluster_17_node_10_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_2/merged_consensuses/node_5/cluster_2_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m36_MA0486.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m68_MA0770.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_1/cluster_21_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m643_MA0137.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m645_MA0144.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_3/cluster_21_node_3_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m69_MA0771.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m36_MA0486.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m68_MA0770.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_2/cluster_21_node_2_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_1/cluster_21_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_21 -name cluster_21 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_1/cluster_21_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_3/cluster_21_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_21 -name cluster_21 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_3/cluster_21_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_2/cluster_21_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_21 -name cluster_21 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_2/cluster_21_node_2_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m748_MA1657.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m804_MA2543.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_13/cluster_17_node_13_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m650_MA0688.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m648_MA1565.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m293_MA0800.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m433_MA1566.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m647_MA0802.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m139_MA1567.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m219_MA0690.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_11/cluster_17_node_11_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_13/cluster_17_node_13_cat.tf -v 0 -in_format tf -out_format tf -id cluster_17 -name cluster_17 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_13/cluster_17_node_13_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m89_MA0806.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m90_MA0807.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m86_MA0801.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m87_MA0803.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m88_MA0805.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m650_MA0688.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m648_MA1565.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m293_MA0800.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m433_MA1566.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m647_MA0802.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m139_MA1567.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m219_MA0690.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_12/cluster_17_node_12_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_11/cluster_17_node_11_cat.tf -v 0 -in_format tf -out_format tf -id cluster_17 -name cluster_17 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_11/cluster_17_node_11_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_12/cluster_17_node_12_cat.tf -v 0 -in_format tf -out_format tf -id cluster_17 -name cluster_17 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_12/cluster_17_node_12_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_3/cluster_21_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223936_PtytV5


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_13/cluster_17_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223936_Bt8gOf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_1/cluster_21_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223936_Tm757l


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_11/cluster_17_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223936_AnSGPr


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_2/cluster_21_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223936_8JLfcs


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_12/cluster_17_nb_motifs_12.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223936_XKv3Oz


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_3/cluster_21_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_13/cluster_17_node_13_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_2/cluster_21_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_11/cluster_17_node_11_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_1/cluster_21_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_12/cluster_17_node_12_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m241_MA0463.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m60_MA0731.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_4/cluster_21_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_4/cluster_21_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_21 -name cluster_21 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_4/cluster_21_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_4/cluster_21_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223938_0sw9cL


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_4/cluster_21_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m643_MA0137.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m645_MA0144.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m241_MA0463.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m60_MA0731.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_5/cluster_21_node_5_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m69_MA0771.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m36_MA0486.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m68_MA0770.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m643_MA0137.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m645_MA0144.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m241_MA0463.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m60_MA0731.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_6/cluster_21_node_6_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_5/cluster_21_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_21 -name cluster_21 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_5/cluster_21_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_6/cluster_21_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_21 -name cluster_21 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_6/cluster_21_node_6_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m50_MA0689.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m89_MA0806.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m90_MA0807.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m86_MA0801.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m87_MA0803.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m88_MA0805.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m650_MA0688.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m648_MA1565.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m293_MA0800.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m433_MA1566.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m647_MA0802.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m139_MA1567.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m219_MA0690.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_14/cluster_17_node_14_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_14/cluster_17_node_14_cat.tf -v 0 -in_format tf -out_format tf -id cluster_17 -name cluster_17 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_14/cluster_17_node_14_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_5/cluster_21_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223939_pIbFlQ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_6/cluster_21_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223939_Cf83Y1


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_14/cluster_17_nb_motifs_13.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223939_Df0ha0


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_5/cluster_21_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_14/cluster_17_node_14_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_21/merged_consensuses/node_6/cluster_21_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m118_MA1129.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m368_MA1139.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_1/cluster_22_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m119_MA1136.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m118_MA1129.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m368_MA1139.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_2/cluster_22_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m366_MA1131.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m370_MA1145.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_3/cluster_22_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_1/cluster_22_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_1/cluster_22_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_3/cluster_22_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_3/cluster_22_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_2/cluster_22_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_2/cluster_22_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_1/cluster_22_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223941_bW1kKb


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_2/cluster_22_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223941_H6UQrZ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_3/cluster_22_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223941_5HeL0d


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_1/cluster_22_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_2/cluster_22_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_3/cluster_22_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m229_MA0834.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m119_MA1136.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m118_MA1129.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m368_MA1139.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_4/cluster_22_node_4_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m366_MA1131.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m370_MA1145.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m229_MA0834.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m119_MA1136.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m118_MA1129.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m368_MA1139.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_5/cluster_22_node_5_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m226_MA0605.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m366_MA1131.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m370_MA1145.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m229_MA0834.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m119_MA1136.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m118_MA1129.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m368_MA1139.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_6/cluster_22_node_6_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_4/cluster_22_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_4/cluster_22_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_5/cluster_22_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_5/cluster_22_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_6/cluster_22_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_6/cluster_22_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_5/cluster_22_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223942_WzJF3M


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_4/cluster_22_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223942_LQTjjZ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_6/cluster_22_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223942_OmMqCZ


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_4/cluster_22_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_5/cluster_22_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_6/cluster_22_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m717_MA2492.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m50_MA0689.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m89_MA0806.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m90_MA0807.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m86_MA0801.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m87_MA0803.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m88_MA0805.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m650_MA0688.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m648_MA1565.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m293_MA0800.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m433_MA1566.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m647_MA0802.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m139_MA1567.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m219_MA0690.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_15/cluster_17_node_15_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_15/cluster_17_node_15_cat.tf -v 0 -in_format tf -out_format tf -id cluster_17 -name cluster_17 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_15/cluster_17_node_15_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_15/cluster_17_nb_motifs_14.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223944_Pm0xZE


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_15/cluster_17_node_15_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m297_MA0779.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m299_MA0781.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_1/cluster_23_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m157_MA2094.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m569_MA0067.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_2/cluster_23_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m25_MA0595.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m26_MA0596.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_8/cluster_22_node_8_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m297_MA0779.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m299_MA0781.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m157_MA2094.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m569_MA0067.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_3/cluster_23_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_1/cluster_23_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_23 -name cluster_23 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_1/cluster_23_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_2/cluster_23_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_23 -name cluster_23 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_2/cluster_23_node_2_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m351_MA1126.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m226_MA0605.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m366_MA1131.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m370_MA1145.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m229_MA0834.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m119_MA1136.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m118_MA1129.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m368_MA1139.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_7/cluster_22_node_7_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_8/cluster_22_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_8/cluster_22_node_8_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_3/cluster_23_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_23 -name cluster_23 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_3/cluster_23_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_7/cluster_22_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_7/cluster_22_node_7_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_1/cluster_23_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223945_d8zAOT


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_2/cluster_23_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223945_czDiws


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_3/cluster_23_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223945_NsjWed


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_8/cluster_22_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223945_kj7mGm


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_7/cluster_22_nb_motifs_8.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223945_iXKgyR


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_1/cluster_23_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_3/cluster_23_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_2/cluster_23_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_7/cluster_22_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_8/cluster_22_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m463_MA0656.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m351_MA1126.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m226_MA0605.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m366_MA1131.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m370_MA1145.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m229_MA0834.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m119_MA1136.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m118_MA1129.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m368_MA1139.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_9/cluster_22_node_9_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_9/cluster_22_node_9_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_9/cluster_22_node_9_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_9/cluster_22_nb_motifs_9.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223946_WoKOLt


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_9/cluster_22_node_9_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m3_MA0069.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m297_MA0779.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m299_MA0781.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m157_MA2094.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m569_MA0067.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_4/cluster_23_node_4_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m117_MA1127.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m353_MA1140.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_10/cluster_22_node_10_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m786_MA2525.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m3_MA0069.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m297_MA0779.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m299_MA0781.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m157_MA2094.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m569_MA0067.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_5/cluster_23_node_5_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_10/cluster_22_node_10_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_10/cluster_22_node_10_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_4/cluster_23_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_23 -name cluster_23 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_4/cluster_23_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_5/cluster_23_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_23 -name cluster_23 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_5/cluster_23_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_10/cluster_22_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223947_ifgz7u


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_4/cluster_23_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223947_nIfnZq


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_5/cluster_23_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223947_ihr98W


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_4/cluster_23_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_23/merged_consensuses/node_5/cluster_23_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_10/cluster_22_node_10_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m225_MA1632.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m239_MA0488.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_11/cluster_22_node_11_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_11/cluster_22_node_11_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_11/cluster_22_node_11_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_11/cluster_22_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223948_6GUtiI


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_11/cluster_22_node_11_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m465_MA1133.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m117_MA1127.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m353_MA1140.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_12/cluster_22_node_12_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_12/cluster_22_node_12_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_12/cluster_22_node_12_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_12/cluster_22_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223950_pbMEja


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_12/cluster_22_node_12_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m185_MA0509.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m191_MA0798.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_24/merged_consensuses/node_1/cluster_24_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m606_MA0600.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m608_MA0510.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_24/merged_consensuses/node_2/cluster_24_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m185_MA0509.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m191_MA0798.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m606_MA0600.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m608_MA0510.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_24/merged_consensuses/node_3/cluster_24_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_24/merged_consensuses/node_1/cluster_24_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_24 -name cluster_24 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_24/merged_consensuses/node_1/cluster_24_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_24/merged_consensuses/node_2/cluster_24_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_24 -name cluster_24 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_24/merged_consensuses/node_2/cluster_24_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_24/merged_consensuses/node_3/cluster_24_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_24 -name cluster_24 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_24/merged_consensuses/node_3/cluster_24_node_3_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m260_MA0609.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m463_MA0656.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m351_MA1126.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m226_MA0605.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m366_MA1131.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m370_MA1145.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m229_MA0834.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m119_MA1136.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m118_MA1129.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m368_MA1139.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_13/cluster_22_node_13_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m502_MA1960.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m717_MA2492.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m50_MA0689.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m89_MA0806.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m90_MA0807.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m86_MA0801.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m87_MA0803.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m88_MA0805.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m650_MA0688.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m648_MA1565.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m293_MA0800.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m433_MA1566.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m647_MA0802.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m139_MA1567.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m219_MA0690.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_16/cluster_17_node_16_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_13/cluster_22_node_13_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_13/cluster_22_node_13_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_16/cluster_17_node_16_cat.tf -v 0 -in_format tf -out_format tf -id cluster_17 -name cluster_17 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_16/cluster_17_node_16_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_24/merged_consensuses/node_1/cluster_24_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223951_5naDgw


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_24/merged_consensuses/node_2/cluster_24_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223951_JGwHuo


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_24/merged_consensuses/node_3/cluster_24_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223951_bIBoUm


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_16/cluster_17_nb_motifs_15.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223951_tMg3uK


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_13/cluster_22_nb_motifs_10.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223951_xUiYLW


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_24/merged_consensuses/node_1/cluster_24_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_24/merged_consensuses/node_2/cluster_24_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_24/merged_consensuses/node_3/cluster_24_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_16/cluster_17_node_16_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_13/cluster_22_node_13_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m356_MA0492.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m465_MA1133.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m117_MA1127.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m353_MA1140.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_14/cluster_22_node_14_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_14/cluster_22_node_14_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_14/cluster_22_node_14_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_14/cluster_22_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223952_x5IxFD


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_14/cluster_22_node_14_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m225_MA1632.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m239_MA0488.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m260_MA0609.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m463_MA0656.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m351_MA1126.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m226_MA0605.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m366_MA1131.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m370_MA1145.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m229_MA0834.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m119_MA1136.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m118_MA1129.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m368_MA1139.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_15/cluster_22_node_15_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_15/cluster_22_node_15_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_15/cluster_22_node_15_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_15/cluster_22_nb_motifs_12.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223953_TlPcUz


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_15/cluster_22_node_15_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m259_MA1475.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m363_MA1143.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_16/cluster_22_node_16_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_16/cluster_22_node_16_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_16/cluster_22_node_16_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m748_MA1657.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m804_MA2543.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m502_MA1960.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m717_MA2492.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m50_MA0689.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m89_MA0806.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m90_MA0807.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m86_MA0801.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m87_MA0803.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m88_MA0805.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m650_MA0688.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m648_MA1565.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m293_MA0800.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m433_MA1566.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m647_MA0802.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m139_MA1567.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m219_MA0690.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_17/cluster_17_node_17_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_17/cluster_17_node_17_cat.tf -v 0 -in_format tf -out_format tf -id cluster_17 -name cluster_17 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_17/cluster_17_node_17_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_16/cluster_22_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223955_Jzzzly


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_17/cluster_17_nb_motifs_17.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223955_HAfboF


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_17/cluster_17_node_17_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_16/cluster_22_node_16_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m286_MA0732.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m287_MA0733.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_1/cluster_25_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m61_MA0472.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m286_MA0732.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m287_MA0733.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_2/cluster_25_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m285_MA0162.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m61_MA0472.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m286_MA0732.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m287_MA0733.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_3/cluster_25_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_1/cluster_25_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_25 -name cluster_25 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_1/cluster_25_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_2/cluster_25_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_25 -name cluster_25 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_2/cluster_25_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_3/cluster_25_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_25 -name cluster_25 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_3/cluster_25_node_3_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m356_MA0492.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m465_MA1133.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m117_MA1127.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m353_MA1140.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m225_MA1632.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m239_MA0488.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m260_MA0609.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m463_MA0656.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m351_MA1126.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m226_MA0605.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m366_MA1131.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m370_MA1145.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m229_MA0834.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m119_MA1136.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m118_MA1129.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m368_MA1139.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_17/cluster_22_node_17_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_17/cluster_22_node_17_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_17/cluster_22_node_17_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_1/cluster_25_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223956_tmlgTL


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_2/cluster_25_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223956_Dt3vR6


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_3/cluster_25_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223956_lFbdw8


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_17/cluster_22_nb_motifs_16.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223956_PyXoqg


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_2/cluster_25_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_1/cluster_25_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_3/cluster_25_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_17/cluster_22_node_17_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m20_MA0506.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m807_MA2546.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_4/cluster_25_node_4_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m844_MA2583.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m20_MA0506.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m807_MA2546.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_5/cluster_25_node_5_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_4/cluster_25_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_25 -name cluster_25 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_4/cluster_25_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_5/cluster_25_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_25 -name cluster_25 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_5/cluster_25_node_5_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m259_MA1475.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m363_MA1143.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m356_MA0492.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m465_MA1133.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m117_MA1127.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m353_MA1140.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m225_MA1632.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m239_MA0488.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m260_MA0609.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m463_MA0656.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m351_MA1126.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m226_MA0605.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m366_MA1131.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m370_MA1145.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m229_MA0834.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m119_MA1136.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m118_MA1129.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m368_MA1139.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_18/cluster_22_node_18_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_18/cluster_22_node_18_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_18/cluster_22_node_18_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_4/cluster_25_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223958_Hv1nJS


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_5/cluster_25_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223958_TUMgC5


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_18/cluster_22_nb_motifs_18.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.223958_lxQtdm


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_4/cluster_25_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_5/cluster_25_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_18/cluster_22_node_18_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m695_MA1650.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m776_MA2515.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_7/cluster_25_node_7_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m285_MA0162.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m61_MA0472.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m286_MA0732.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m287_MA0733.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m844_MA2583.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m20_MA0506.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m807_MA2546.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_6/cluster_25_node_6_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_7/cluster_25_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_25 -name cluster_25 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_7/cluster_25_node_7_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m285_MA0162.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m61_MA0472.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m286_MA0732.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m287_MA0733.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m844_MA2583.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m20_MA0506.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m807_MA2546.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m695_MA1650.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m776_MA2515.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_8/cluster_25_node_8_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_6/cluster_25_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_25 -name cluster_25 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_6/cluster_25_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_8/cluster_25_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_25 -name cluster_25 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_8/cluster_25_node_8_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_7/cluster_25_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224000_r38PDM


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_6/cluster_25_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224000_WIZUiG


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_8/cluster_25_nb_motifs_9.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224000_xejNWc


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_7/cluster_25_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_8/cluster_25_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_25/merged_consensuses/node_6/cluster_25_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m778_MA2517.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m748_MA1657.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m804_MA2543.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m502_MA1960.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m717_MA2492.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m50_MA0689.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m89_MA0806.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m90_MA0807.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m86_MA0801.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m87_MA0803.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m88_MA0805.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m650_MA0688.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m648_MA1565.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m293_MA0800.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m433_MA1566.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m647_MA0802.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m139_MA1567.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m219_MA0690.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_18/cluster_17_node_18_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_18/cluster_17_node_18_cat.tf -v 0 -in_format tf -out_format tf -id cluster_17 -name cluster_17 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_18/cluster_17_node_18_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_18/cluster_17_nb_motifs_18.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224001_f8YZ3H


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_18/cluster_17_node_18_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m349_MA1951.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m259_MA1475.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m363_MA1143.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m356_MA0492.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m465_MA1133.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m117_MA1127.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m353_MA1140.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m225_MA1632.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m239_MA0488.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m260_MA0609.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m463_MA0656.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m351_MA1126.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m226_MA0605.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m366_MA1131.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m370_MA1145.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m229_MA0834.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m119_MA1136.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m118_MA1129.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m368_MA1139.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_19/cluster_22_node_19_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_19/cluster_22_node_19_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_19/cluster_22_node_19_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_19/cluster_22_nb_motifs_19.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224004_7o5ztx


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_19/cluster_22_node_19_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m190_MA0742.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m197_MA1511.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_1/cluster_26_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m467_MA1512.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m638_MA1564.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_2/cluster_26_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m189_MA0740.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m190_MA0742.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m197_MA1511.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_3/cluster_26_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_2/cluster_26_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_2/cluster_26_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_1/cluster_26_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_1/cluster_26_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_3/cluster_26_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_3/cluster_26_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_1/cluster_26_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224005_3hKykv


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_2/cluster_26_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224005_Esvx5J


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_3/cluster_26_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224005_b34jCP


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_2/cluster_26_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_1/cluster_26_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_3/cluster_26_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m184_MA0079.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m188_MA0685.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_4/cluster_26_node_4_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m466_MA0493.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m475_MA1959.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_5/cluster_26_node_5_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_4/cluster_26_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_4/cluster_26_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_5/cluster_26_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_5/cluster_26_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_5/cluster_26_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224006_ZwFPnQ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_4/cluster_26_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224006_AXqa7E


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_5/cluster_26_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_4/cluster_26_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m186_MA0516.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m189_MA0740.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m190_MA0742.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m197_MA1511.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_6/cluster_26_node_6_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m635_MA0746.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m64_MA0741.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_8/cluster_26_node_8_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m184_MA0079.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m188_MA0685.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m186_MA0516.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m189_MA0740.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m190_MA0742.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m197_MA1511.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_7/cluster_26_node_7_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_8/cluster_26_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_8/cluster_26_node_8_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_6/cluster_26_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_6/cluster_26_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_7/cluster_26_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_7/cluster_26_node_7_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_6/cluster_26_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224007_j6K7kt


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_7/cluster_26_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224007_pGCeOS


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_8/cluster_26_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224007_0BkgSe


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_6/cluster_26_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_7/cluster_26_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_8/cluster_26_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m715_MA1653.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m724_MA1630.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_9/cluster_26_node_9_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_9/cluster_26_node_9_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_9/cluster_26_node_9_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m866_MA2629.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m778_MA2517.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m748_MA1657.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m804_MA2543.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m502_MA1960.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m717_MA2492.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m50_MA0689.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m89_MA0806.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m90_MA0807.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m86_MA0801.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m87_MA0803.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m88_MA0805.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m650_MA0688.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m648_MA1565.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m293_MA0800.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m433_MA1566.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m647_MA0802.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m139_MA1567.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m219_MA0690.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_19/cluster_17_node_19_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_19/cluster_17_node_19_cat.tf -v 0 -in_format tf -out_format tf -id cluster_17 -name cluster_17 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_19/cluster_17_node_19_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_9/cluster_26_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224008_14APFd


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_19/cluster_17_nb_motifs_19.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224008_KULUNt


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_9/cluster_26_node_9_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_19/cluster_17_node_19_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m471_MA1515.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m466_MA0493.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m475_MA1959.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_10/cluster_26_node_10_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m568_MA1961.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m874_MA2681.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_11/cluster_26_node_11_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_11/cluster_26_node_11_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_11/cluster_26_node_11_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_10/cluster_26_node_10_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_10/cluster_26_node_10_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m255_MA0018.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m349_MA1951.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m259_MA1475.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m363_MA1143.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m356_MA0492.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m465_MA1133.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m117_MA1127.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m353_MA1140.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m225_MA1632.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m239_MA0488.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m260_MA0609.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m463_MA0656.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m351_MA1126.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m226_MA0605.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m366_MA1131.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m370_MA1145.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m229_MA0834.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m119_MA1136.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m118_MA1129.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m368_MA1139.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_20/cluster_22_node_20_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_20/cluster_22_node_20_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_20/cluster_22_node_20_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_10/cluster_26_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224009_6blBZH


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_11/cluster_26_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224009_Fyz49w


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_20/cluster_22_nb_motifs_20.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224009_VjvrAF


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_10/cluster_26_node_10_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_11/cluster_26_node_11_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_20/cluster_22_node_20_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m636_MA1965.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m826_MA2565.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_12/cluster_26_node_12_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m469_MA1513.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m471_MA1515.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m466_MA0493.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m475_MA1959.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_13/cluster_26_node_13_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_12/cluster_26_node_12_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_12/cluster_26_node_12_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_13/cluster_26_node_13_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_13/cluster_26_node_13_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_13/cluster_26_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224010_K8gvo0


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_12/cluster_26_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224010_8Pp9Ue


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_13/cluster_26_node_13_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_12/cluster_26_node_12_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m697_MA2487.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m801_MA2540.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_21/cluster_22_node_21_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m637_MA0747.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m467_MA1512.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m638_MA1564.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_14/cluster_26_node_14_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_21/cluster_22_node_21_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_21/cluster_22_node_21_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_14/cluster_26_node_14_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_14/cluster_26_node_14_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_21/cluster_22_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224011_XOsPcC


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_14/cluster_26_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224011_kzB6Z8


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_21/cluster_22_node_21_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_14/cluster_26_node_14_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m476_MA1107.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m635_MA0746.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m64_MA0741.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_16/cluster_26_node_16_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m473_MA0039.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m469_MA1513.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m471_MA1515.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m466_MA0493.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m475_MA1959.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_15/cluster_26_node_15_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_16/cluster_26_node_16_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_16/cluster_26_node_16_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_15/cluster_26_node_15_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_15/cluster_26_node_15_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_15/cluster_26_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224012_2Ot58U


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_16/cluster_26_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224012_NnMaYX


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_15/cluster_26_node_15_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_16/cluster_26_node_16_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m27_MA0599.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m568_MA1961.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m874_MA2681.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_17/cluster_26_node_17_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m108_MA0862.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m255_MA0018.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m349_MA1951.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m259_MA1475.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m363_MA1143.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m356_MA0492.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m465_MA1133.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m117_MA1127.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m353_MA1140.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m225_MA1632.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m239_MA0488.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m260_MA0609.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m463_MA0656.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m351_MA1126.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m226_MA0605.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m366_MA1131.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m370_MA1145.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m229_MA0834.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m119_MA1136.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m118_MA1129.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m368_MA1139.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_22/cluster_22_node_22_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_17/cluster_26_node_17_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_17/cluster_26_node_17_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m49_MA0009.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m649_MA0804.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m866_MA2629.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m778_MA2517.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m748_MA1657.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m804_MA2543.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m502_MA1960.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m717_MA2492.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m50_MA0689.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m89_MA0806.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m90_MA0807.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m86_MA0801.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m87_MA0803.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m88_MA0805.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m650_MA0688.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m648_MA1565.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m293_MA0800.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m433_MA1566.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m647_MA0802.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m139_MA1567.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m219_MA0690.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_20/cluster_17_node_20_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_22/cluster_22_node_22_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_22/cluster_22_node_22_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_20/cluster_17_node_20_cat.tf -v 0 -in_format tf -out_format tf -id cluster_17 -name cluster_17 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_20/cluster_17_node_20_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_17/cluster_26_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224013_hRwqm6


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_22/cluster_22_nb_motifs_21.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224013_X7zutp


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_20/cluster_17_nb_motifs_21.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224013_ko6tz5


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_17/cluster_26_node_17_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_22/cluster_22_node_22_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_17/merged_consensuses/node_20/cluster_17_node_20_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m474_MA1517.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m637_MA0747.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m467_MA1512.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m638_MA1564.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_18/cluster_26_node_18_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_18/cluster_26_node_18_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_18/cluster_26_node_18_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m184_MA0079.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m188_MA0685.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m186_MA0516.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m189_MA0740.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m190_MA0742.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m197_MA1511.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m473_MA0039.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m469_MA1513.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m471_MA1515.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m466_MA0493.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m475_MA1959.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_19/cluster_26_node_19_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_19/cluster_26_node_19_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_19/cluster_26_node_19_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_19/cluster_26_nb_motifs_11.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224015_3O7HpN


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_18/cluster_26_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224015_ot0qGr


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_18/cluster_26_node_18_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_19/cluster_26_node_19_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m722_MA0528.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m636_MA1965.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m826_MA2565.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_21/cluster_26_node_21_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m476_MA1107.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m635_MA0746.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m64_MA0741.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m474_MA1517.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m637_MA0747.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m467_MA1512.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m638_MA1564.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_20/cluster_26_node_20_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_21/cluster_26_node_21_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_21/cluster_26_node_21_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_20/cluster_26_node_20_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_20/cluster_26_node_20_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_21/cluster_26_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224017_CXaKBB


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_20/cluster_26_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224017_vWn9Xy


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_21/cluster_26_node_21_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_20/cluster_26_node_20_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m25_MA0595.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m26_MA0596.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m108_MA0862.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m255_MA0018.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m349_MA1951.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m259_MA1475.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m363_MA1143.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m356_MA0492.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m465_MA1133.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m117_MA1127.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m353_MA1140.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m225_MA1632.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m239_MA0488.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m260_MA0609.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m463_MA0656.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m351_MA1126.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m226_MA0605.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m366_MA1131.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m370_MA1145.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m229_MA0834.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m119_MA1136.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m118_MA1129.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m368_MA1139.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_23/cluster_22_node_23_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_23/cluster_22_node_23_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_23/cluster_22_node_23_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_23/cluster_22_nb_motifs_23.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224018_fmMLe6


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_23/cluster_22_node_23_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m715_MA1653.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m724_MA1630.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m27_MA0599.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m568_MA1961.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m874_MA2681.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_22/cluster_26_node_22_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_22/cluster_26_node_22_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_22/cluster_26_node_22_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_22/cluster_26_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224020_jozVir


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_22/cluster_26_node_22_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m493_MA1522.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m184_MA0079.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m188_MA0685.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m186_MA0516.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m189_MA0740.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m190_MA0742.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m197_MA1511.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m473_MA0039.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m469_MA1513.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m471_MA1515.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m466_MA0493.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m475_MA1959.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_23/cluster_26_node_23_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_23/cluster_26_node_23_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_23/cluster_26_node_23_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_23/cluster_26_nb_motifs_12.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224021_SCuQ83


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_23/cluster_26_node_23_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m715_MA1653.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m724_MA1630.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m27_MA0599.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m568_MA1961.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m874_MA2681.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m493_MA1522.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m184_MA0079.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m188_MA0685.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m186_MA0516.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m189_MA0740.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m190_MA0742.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m197_MA1511.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m473_MA0039.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m469_MA1513.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m471_MA1515.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m466_MA0493.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m475_MA1959.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_24/cluster_26_node_24_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_24/cluster_26_node_24_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_24/cluster_26_node_24_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_24/cluster_26_nb_motifs_17.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224022_hurmcq


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_24/cluster_26_node_24_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m476_MA1107.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m635_MA0746.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m64_MA0741.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m474_MA1517.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m637_MA0747.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m467_MA1512.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m638_MA1564.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m715_MA1653.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m724_MA1630.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m27_MA0599.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m568_MA1961.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m874_MA2681.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m493_MA1522.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m184_MA0079.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m188_MA0685.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m186_MA0516.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m189_MA0740.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m190_MA0742.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m197_MA1511.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m473_MA0039.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m469_MA1513.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m471_MA1515.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m466_MA0493.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m475_MA1959.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_25/cluster_26_node_25_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_25/cluster_26_node_25_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_25/cluster_26_node_25_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_25/cluster_26_nb_motifs_24.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224024_KJfZuR


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_25/cluster_26_node_25_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m697_MA2487.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m801_MA2540.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m25_MA0595.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m26_MA0596.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m108_MA0862.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m255_MA0018.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m349_MA1951.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m259_MA1475.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m363_MA1143.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m356_MA0492.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m465_MA1133.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m117_MA1127.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m353_MA1140.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m225_MA1632.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m239_MA0488.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m260_MA0609.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m463_MA0656.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m351_MA1126.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m226_MA0605.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m366_MA1131.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m370_MA1145.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m229_MA0834.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m119_MA1136.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m118_MA1129.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m368_MA1139.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_24/cluster_22_node_24_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m687_MA1578.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m722_MA0528.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m636_MA1965.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m826_MA2565.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_26/cluster_26_node_26_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_24/cluster_22_node_24_cat.tf -v 0 -in_format tf -out_format tf -id cluster_22 -name cluster_22 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_24/cluster_22_node_24_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_26/cluster_26_node_26_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_26/cluster_26_node_26_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_26/cluster_26_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224027_g3blHG


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_24/cluster_22_nb_motifs_25.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224028_SlzJrg


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_26/cluster_26_node_26_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_22/merged_consensuses/node_24/cluster_22_node_24_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m472_MA1516.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m752_MA1599.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_27/cluster_26_node_27_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_27/cluster_26_node_27_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_27/cluster_26_node_27_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_27/cluster_26_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224030_9vsF9Z


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_27/cluster_26_node_27_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m757_MA0753.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m476_MA1107.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m635_MA0746.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m64_MA0741.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m474_MA1517.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m637_MA0747.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m467_MA1512.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m638_MA1564.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m715_MA1653.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m724_MA1630.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m27_MA0599.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m568_MA1961.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m874_MA2681.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m493_MA1522.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m184_MA0079.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m188_MA0685.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m186_MA0516.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m189_MA0740.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m190_MA0742.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m197_MA1511.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m473_MA0039.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m469_MA1513.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m471_MA1515.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m466_MA0493.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m475_MA1959.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_28/cluster_26_node_28_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_28/cluster_26_node_28_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_28/cluster_26_node_28_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_28/cluster_26_nb_motifs_25.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224033_OmetZn


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_28/cluster_26_node_28_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m831_MA2570.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m839_MA2578.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_29/cluster_26_node_29_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m208_MA2328.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m800_MA2539.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_30/cluster_26_node_30_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_29/cluster_26_node_29_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_29/cluster_26_node_29_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_30/cluster_26_node_30_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_30/cluster_26_node_30_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_30/cluster_26_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224034_ZmR613


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_29/cluster_26_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224034_93EusN


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_30/cluster_26_node_30_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_29/cluster_26_node_29_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m472_MA1516.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m752_MA1599.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m757_MA0753.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m476_MA1107.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m635_MA0746.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m64_MA0741.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m474_MA1517.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m637_MA0747.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m467_MA1512.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m638_MA1564.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m715_MA1653.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m724_MA1630.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m27_MA0599.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m568_MA1961.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m874_MA2681.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m493_MA1522.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m184_MA0079.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m188_MA0685.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m186_MA0516.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m189_MA0740.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m190_MA0742.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m197_MA1511.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m473_MA0039.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m469_MA1513.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m471_MA1515.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m466_MA0493.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m475_MA1959.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_31/cluster_26_node_31_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_31/cluster_26_node_31_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_31/cluster_26_node_31_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_31/cluster_26_nb_motifs_27.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224035_InzUmm


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_31/cluster_26_node_31_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m831_MA2570.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m839_MA2578.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m472_MA1516.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m752_MA1599.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m757_MA0753.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m476_MA1107.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m635_MA0746.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m64_MA0741.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m474_MA1517.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m637_MA0747.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m467_MA1512.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m638_MA1564.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m715_MA1653.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m724_MA1630.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m27_MA0599.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m568_MA1961.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m874_MA2681.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m493_MA1522.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m184_MA0079.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m188_MA0685.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m186_MA0516.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m189_MA0740.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m190_MA0742.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m197_MA1511.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m473_MA0039.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m469_MA1513.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m471_MA1515.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m466_MA0493.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m475_MA1959.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_32/cluster_26_node_32_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_32/cluster_26_node_32_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_32/cluster_26_node_32_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_32/cluster_26_nb_motifs_29.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224036_eaOhV7


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_32/cluster_26_node_32_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m53_MA0697.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m709_MA1584.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_1/cluster_27_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m150_MA0734.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m404_MA1491.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_2/cluster_27_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m52_MA0696.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m708_MA0751.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_3/cluster_27_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_1/cluster_27_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_27 -name cluster_27 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_1/cluster_27_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_2/cluster_27_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_27 -name cluster_27 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_2/cluster_27_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_3/cluster_27_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_27 -name cluster_27 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_3/cluster_27_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_2/cluster_27_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224038_iQsoCt


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_1/cluster_27_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224038_SNFgdK


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_3/cluster_27_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224039_0z7mb8


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_3/cluster_27_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_1/cluster_27_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_2/cluster_27_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m62_MA0736.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m63_MA0737.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_4/cluster_27_node_4_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m53_MA0697.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m709_MA1584.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m52_MA0696.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m708_MA0751.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_5/cluster_27_node_5_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_4/cluster_27_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_27 -name cluster_27 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_4/cluster_27_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_5/cluster_27_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_27 -name cluster_27 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_5/cluster_27_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_5/cluster_27_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224042_yjnIm5


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_4/cluster_27_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224042_rUwRII


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_4/cluster_27_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_5/cluster_27_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m405_MA0735.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m62_MA0736.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m63_MA0737.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_6/cluster_27_node_6_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m150_MA0734.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m404_MA1491.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m405_MA0735.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m62_MA0736.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m63_MA0737.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_7/cluster_27_node_7_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_6/cluster_27_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_27 -name cluster_27 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_6/cluster_27_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_7/cluster_27_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_27 -name cluster_27 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_7/cluster_27_node_7_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m687_MA1578.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m722_MA0528.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m636_MA1965.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m826_MA2565.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m831_MA2570.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m839_MA2578.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m472_MA1516.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m752_MA1599.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m757_MA0753.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m476_MA1107.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m635_MA0746.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m64_MA0741.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m474_MA1517.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m637_MA0747.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m467_MA1512.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m638_MA1564.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m715_MA1653.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m724_MA1630.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m27_MA0599.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m568_MA1961.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m874_MA2681.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m493_MA1522.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m184_MA0079.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m188_MA0685.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m186_MA0516.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m189_MA0740.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m190_MA0742.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m197_MA1511.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m473_MA0039.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m469_MA1513.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m471_MA1515.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m466_MA0493.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m475_MA1959.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_33/cluster_26_node_33_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_33/cluster_26_node_33_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_33/cluster_26_node_33_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_6/cluster_27_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224043_lRf4Cv


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_7/cluster_27_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224043_0w6UPB


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_33/cluster_26_nb_motifs_33.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224043_MDrlLX


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_6/cluster_27_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_7/cluster_27_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_33/cluster_26_node_33_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m53_MA0697.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m709_MA1584.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m52_MA0696.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m708_MA0751.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m150_MA0734.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m404_MA1491.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m405_MA0735.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m62_MA0736.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m63_MA0737.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_8/cluster_27_node_8_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_8/cluster_27_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_27 -name cluster_27 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_8/cluster_27_node_8_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_8/cluster_27_nb_motifs_9.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224045_XRHA93


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_27/merged_consensuses/node_8/cluster_27_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m39_MA0660.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m70_MA0773.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_1/cluster_28_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m494_MA0052.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m495_MA0497.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_2/cluster_28_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m39_MA0660.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m70_MA0773.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m494_MA0052.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m495_MA0497.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_3/cluster_28_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_2/cluster_28_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_28 -name cluster_28 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_2/cluster_28_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_1/cluster_28_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_28 -name cluster_28 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_1/cluster_28_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_3/cluster_28_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_28 -name cluster_28 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_3/cluster_28_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_2/cluster_28_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224046_rlf0OZ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_3/cluster_28_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224046_1ah30s


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_1/cluster_28_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224046_mVlDgP


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_3/cluster_28_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_2/cluster_28_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_1/cluster_28_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m208_MA2328.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m800_MA2539.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m687_MA1578.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m722_MA0528.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m636_MA1965.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m826_MA2565.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m831_MA2570.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m839_MA2578.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m472_MA1516.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m752_MA1599.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m757_MA0753.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m476_MA1107.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m635_MA0746.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m64_MA0741.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m474_MA1517.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m637_MA0747.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m467_MA1512.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m638_MA1564.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m715_MA1653.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m724_MA1630.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m27_MA0599.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m568_MA1961.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m874_MA2681.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m493_MA1522.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m184_MA0079.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m188_MA0685.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m186_MA0516.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m189_MA0740.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m190_MA0742.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m197_MA1511.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m473_MA0039.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m469_MA1513.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m471_MA1515.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m466_MA0493.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m475_MA1959.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_34/cluster_26_node_34_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_34/cluster_26_node_34_cat.tf -v 0 -in_format tf -out_format tf -id cluster_26 -name cluster_26 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_34/cluster_26_node_34_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_34/cluster_26_nb_motifs_35.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224047_8YfjHx


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_26/merged_consensuses/node_34/cluster_26_node_34_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m733_MA1125.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m854_MA2593.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_4/cluster_28_node_4_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m39_MA0660.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m70_MA0773.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m494_MA0052.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m495_MA0497.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m733_MA1125.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m854_MA2593.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_5/cluster_28_node_5_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_4/cluster_28_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_28 -name cluster_28 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_4/cluster_28_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_5/cluster_28_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_28 -name cluster_28 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_5/cluster_28_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_4/cluster_28_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224048_2ciPlZ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_5/cluster_28_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224048_PTCX3l


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_5/cluster_28_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_28/merged_consensuses/node_4/cluster_28_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m277_MA0864.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m280_MA0470.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_29/merged_consensuses/node_1/cluster_29_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m397_MA1104.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m680_MA1970.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_1/cluster_3_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m116_MA0037.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m396_MA0766.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_2/cluster_3_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m110_MA0024.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m277_MA0864.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m280_MA0470.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_29/merged_consensuses/node_2/cluster_29_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m395_MA0482.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m397_MA1104.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m680_MA1970.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_3/cluster_3_node_3_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m278_MA0469.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m110_MA0024.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m277_MA0864.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m280_MA0470.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_29/merged_consensuses/node_3/cluster_29_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_29/merged_consensuses/node_1/cluster_29_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_29 -name cluster_29 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_29/merged_consensuses/node_1/cluster_29_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_2/cluster_3_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_3 -name cluster_3 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_2/cluster_3_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_29/merged_consensuses/node_2/cluster_29_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_29 -name cluster_29 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_29/merged_consensuses/node_2/cluster_29_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_1/cluster_3_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_3 -name cluster_3 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_1/cluster_3_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_3/cluster_3_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_3 -name cluster_3 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_3/cluster_3_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_29/merged_consensuses/node_3/cluster_29_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_29 -name cluster_29 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_29/merged_consensuses/node_3/cluster_29_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_29/merged_consensuses/node_1/cluster_29_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224054_hoAFZE


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_3/cluster_3_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224054_UoS3bc


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_1/cluster_3_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224054_Voj2Wk


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_29/merged_consensuses/node_3/cluster_29_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224054_tqeVtc


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_2/cluster_3_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224054_P8abfJ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_29/merged_consensuses/node_2/cluster_29_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224054_IXOCEF


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_29/merged_consensuses/node_1/cluster_29_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_29/merged_consensuses/node_3/cluster_29_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_2/cluster_3_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_1/cluster_3_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_3/cluster_3_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_29/merged_consensuses/node_2/cluster_29_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m116_MA0037.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m396_MA0766.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m395_MA0482.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m397_MA1104.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m680_MA1970.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_4/cluster_3_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_4/cluster_3_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_3 -name cluster_3 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_4/cluster_3_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_4/cluster_3_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224056_qniv6m


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_4/cluster_3_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m796_MA2535.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m278_MA0469.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m110_MA0024.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m277_MA0864.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m280_MA0470.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_29/merged_consensuses/node_4/cluster_29_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_29/merged_consensuses/node_4/cluster_29_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_29 -name cluster_29 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_29/merged_consensuses/node_4/cluster_29_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_29/merged_consensuses/node_4/cluster_29_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224057_fiCOO0


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_29/merged_consensuses/node_4/cluster_29_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m392_MA0035.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m394_MA0036.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_5/cluster_3_node_5_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_5/cluster_3_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_3 -name cluster_3 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_5/cluster_3_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_5/cluster_3_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224059_NSYsJ7


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_5/cluster_3_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m116_MA0037.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m396_MA0766.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m395_MA0482.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m397_MA1104.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m680_MA1970.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m392_MA0035.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m394_MA0036.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_6/cluster_3_node_6_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_6/cluster_3_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_3 -name cluster_3 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_6/cluster_3_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_6/cluster_3_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224101_jlFai5


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_3/merged_consensuses/node_6/cluster_3_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m838_MA2577.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m857_MA2596.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_1/cluster_30_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m617_MA0743.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m618_MA0744.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_1/cluster_31_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m406_MA0647.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m669_MA1968.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_2/cluster_31_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m210_MA2470.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m284_MA1637.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_3/cluster_30_node_3_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m837_MA2576.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m838_MA2577.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m857_MA2596.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_2/cluster_30_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m620_MA1118.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m621_MA1119.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_3/cluster_31_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_2/cluster_31_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_31 -name cluster_31 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_2/cluster_31_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_3/cluster_30_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_30 -name cluster_30 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_3/cluster_30_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_1/cluster_31_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_31 -name cluster_31 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_1/cluster_31_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_1/cluster_30_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_30 -name cluster_30 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_1/cluster_30_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_3/cluster_31_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_31 -name cluster_31 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_3/cluster_31_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_2/cluster_30_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_30 -name cluster_30 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_2/cluster_30_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_3/cluster_30_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224103_XMxlct


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_2/cluster_30_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224103_1Qmll9


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_2/cluster_31_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224103_szot4V


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_1/cluster_30_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224103_vj23Ao


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_3/cluster_31_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224103_biDw5A


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_1/cluster_31_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224103_DICjGJ


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_3/cluster_30_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_3/cluster_31_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_2/cluster_30_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_1/cluster_30_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_2/cluster_31_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_1/cluster_31_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m264_MA1102.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m837_MA2576.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m838_MA2577.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m857_MA2596.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_4/cluster_30_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_4/cluster_30_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_30 -name cluster_30 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_4/cluster_30_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_4/cluster_30_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224104_KEfC6H


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_4/cluster_30_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m407_MA1105.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m406_MA0647.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m669_MA1968.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_4/cluster_31_node_4_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m673_MA0597.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m264_MA1102.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m837_MA2576.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m838_MA2577.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m857_MA2596.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_5/cluster_30_node_5_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m617_MA0743.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m618_MA0744.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m407_MA1105.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m406_MA0647.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m669_MA1968.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_5/cluster_31_node_5_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m210_MA2470.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m284_MA1637.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m673_MA0597.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m264_MA1102.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m837_MA2576.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m838_MA2577.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m857_MA2596.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_6/cluster_30_node_6_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_4/cluster_31_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_31 -name cluster_31 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_4/cluster_31_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_5/cluster_30_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_30 -name cluster_30 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_5/cluster_30_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_5/cluster_31_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_31 -name cluster_31 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_5/cluster_31_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_6/cluster_30_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_30 -name cluster_30 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_6/cluster_30_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_4/cluster_31_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224105_L4j2Lt


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_5/cluster_31_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224105_Bv8owH


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_5/cluster_30_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224105_Y9O0qv


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_6/cluster_30_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224105_EUh2PP


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_4/cluster_31_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_5/cluster_31_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_5/cluster_30_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_30/merged_consensuses/node_6/cluster_30_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m162_MA2098.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m620_MA1118.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m621_MA1119.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_6/cluster_31_node_6_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_6/cluster_31_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_31 -name cluster_31 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_6/cluster_31_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_6/cluster_31_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224108_dQIBQA


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_6/cluster_31_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m536_MA2003.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m538_MA0673.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_1/cluster_32_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m535_MA0672.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m536_MA2003.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m538_MA0673.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_2/cluster_32_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m508_MA1523.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m537_MA0063.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_3/cluster_32_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_1/cluster_32_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_32 -name cluster_32 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_1/cluster_32_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_2/cluster_32_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_32 -name cluster_32 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_2/cluster_32_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_3/cluster_32_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_32 -name cluster_32 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_3/cluster_32_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_2/cluster_32_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224109_k49mQJ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_3/cluster_32_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224109_GiJm4U


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_1/cluster_32_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224109_Hr5ddC


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_2/cluster_32_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_1/cluster_32_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_3/cluster_32_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m617_MA0743.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m618_MA0744.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m407_MA1105.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m406_MA0647.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m669_MA1968.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m162_MA2098.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m620_MA1118.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m621_MA1119.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_7/cluster_31_node_7_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_7/cluster_31_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_31 -name cluster_31 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_7/cluster_31_node_7_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_7/cluster_31_nb_motifs_8.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224110_Df8tnl


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_31/merged_consensuses/node_7/cluster_31_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m534_MA1645.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m508_MA1523.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m537_MA0063.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_4/cluster_32_node_4_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m54_MA0122.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m535_MA0672.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m536_MA2003.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m538_MA0673.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_5/cluster_32_node_5_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m534_MA1645.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m508_MA1523.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m537_MA0063.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m54_MA0122.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m535_MA0672.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m536_MA2003.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m538_MA0673.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_6/cluster_32_node_6_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_4/cluster_32_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_32 -name cluster_32 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_4/cluster_32_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_5/cluster_32_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_32 -name cluster_32 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_5/cluster_32_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_6/cluster_32_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_32 -name cluster_32 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_6/cluster_32_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_4/cluster_32_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224111_bA8ThZ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_5/cluster_32_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224111_XrFkKK


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_6/cluster_32_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224111_lorSwN


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_4/cluster_32_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_5/cluster_32_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_6/cluster_32_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m871_MA2678.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m873_MA2680.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_1/cluster_33_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m872_MA2679.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m871_MA2678.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m873_MA2680.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_2/cluster_33_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m853_MA2592.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m872_MA2679.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m871_MA2678.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m873_MA2680.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_3/cluster_33_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_1/cluster_33_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_33 -name cluster_33 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_1/cluster_33_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_2/cluster_33_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_33 -name cluster_33 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_2/cluster_33_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_3/cluster_33_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_33 -name cluster_33 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_3/cluster_33_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_1/cluster_33_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224112_kXBMsS


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_3/cluster_33_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224112_T1IvOp


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_2/cluster_33_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224112_OZlyYg


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_3/cluster_33_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_1/cluster_33_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_2/cluster_33_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m216_MA2336.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m775_MA2514.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_8/cluster_32_node_8_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m511_MA1108.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m820_MA2559.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_4/cluster_33_node_4_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m853_MA2592.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m872_MA2679.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m871_MA2678.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m873_MA2680.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m511_MA1108.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m820_MA2559.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_5/cluster_33_node_5_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m859_MA2598.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m534_MA1645.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m508_MA1523.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m537_MA0063.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m54_MA0122.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m535_MA0672.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m536_MA2003.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m538_MA0673.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_7/cluster_32_node_7_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m845_MA2584.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m853_MA2592.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m872_MA2679.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m871_MA2678.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m873_MA2680.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m511_MA1108.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m820_MA2559.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_6/cluster_33_node_6_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_8/cluster_32_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_32 -name cluster_32 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_8/cluster_32_node_8_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_4/cluster_33_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_33 -name cluster_33 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_4/cluster_33_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_5/cluster_33_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_33 -name cluster_33 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_5/cluster_33_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_7/cluster_32_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_32 -name cluster_32 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_7/cluster_32_node_7_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_6/cluster_33_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_33 -name cluster_33 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_6/cluster_33_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_7/cluster_32_nb_motifs_8.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224114_vQeAX7


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_6/cluster_33_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224114_wDIghf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_8/cluster_32_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224114_Zysogl


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_5/cluster_33_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224114_zTUoyZ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_4/cluster_33_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224114_Qs8kzT


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_7/cluster_32_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_6/cluster_33_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_5/cluster_33_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_8/cluster_32_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_33/merged_consensuses/node_4/cluster_33_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m859_MA2598.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m534_MA1645.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m508_MA1523.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m537_MA0063.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m54_MA0122.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m535_MA0672.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m536_MA2003.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m538_MA0673.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m216_MA2336.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m775_MA2514.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_9/cluster_32_node_9_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_9/cluster_32_node_9_cat.tf -v 0 -in_format tf -out_format tf -id cluster_32 -name cluster_32 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_9/cluster_32_node_9_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_9/cluster_32_nb_motifs_10.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224115_7Ej9I7


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_32/merged_consensuses/node_9/cluster_32_node_9_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m528_MA1528.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m9_MA0119.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_34/merged_consensuses/node_1/cluster_34_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m525_MA1527.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m528_MA1528.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m9_MA0119.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_34/merged_consensuses/node_2/cluster_34_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m523_MA1643.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m525_MA1527.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m528_MA1528.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m9_MA0119.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_34/merged_consensuses/node_3/cluster_34_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_34/merged_consensuses/node_1/cluster_34_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_34 -name cluster_34 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_34/merged_consensuses/node_1/cluster_34_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_34/merged_consensuses/node_2/cluster_34_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_34 -name cluster_34 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_34/merged_consensuses/node_2/cluster_34_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_34/merged_consensuses/node_3/cluster_34_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_34 -name cluster_34 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_34/merged_consensuses/node_3/cluster_34_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_34/merged_consensuses/node_1/cluster_34_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224118_glouAJ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_34/merged_consensuses/node_2/cluster_34_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224118_ITS4mS


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_34/merged_consensuses/node_3/cluster_34_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224118_HwQahv


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_34/merged_consensuses/node_1/cluster_34_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_34/merged_consensuses/node_3/cluster_34_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_34/merged_consensuses/node_2/cluster_34_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m55_MA0713.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m56_MA0715.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_35/merged_consensuses/node_1/cluster_35_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m329_MA1941.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m667_MA1966.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_1/cluster_36_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m575_MA0681.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m55_MA0713.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m56_MA0715.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_35/merged_consensuses/node_2/cluster_35_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m311_MA1934.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m329_MA1941.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m667_MA1966.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_2/cluster_36_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m18_MA0468.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m575_MA0681.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m55_MA0713.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m56_MA0715.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_35/merged_consensuses/node_3/cluster_35_node_3_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m336_MA1945.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m311_MA1934.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m329_MA1941.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m667_MA1966.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_3/cluster_36_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_35/merged_consensuses/node_1/cluster_35_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_35 -name cluster_35 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_35/merged_consensuses/node_1/cluster_35_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_1/cluster_36_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_36 -name cluster_36 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_1/cluster_36_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_35/merged_consensuses/node_2/cluster_35_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_35 -name cluster_35 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_35/merged_consensuses/node_2/cluster_35_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_2/cluster_36_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_36 -name cluster_36 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_2/cluster_36_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_35/merged_consensuses/node_3/cluster_35_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_35 -name cluster_35 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_35/merged_consensuses/node_3/cluster_35_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_3/cluster_36_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_36 -name cluster_36 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_3/cluster_36_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_35/merged_consensuses/node_1/cluster_35_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224122_IRTCnr


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_2/cluster_36_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224122_CHkvwX


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_35/merged_consensuses/node_2/cluster_35_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224122_wQYRpI


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_3/cluster_36_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224122_VAAaCN


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_1/cluster_36_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224122_5IpJ8r


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_35/merged_consensuses/node_3/cluster_35_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224122_xaSCsw


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_2/cluster_36_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_35/merged_consensuses/node_2/cluster_35_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_3/cluster_36_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_35/merged_consensuses/node_1/cluster_35_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_35/merged_consensuses/node_3/cluster_35_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_1/cluster_36_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m281_MA0471.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m670_MA1122.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_1/cluster_37_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m400_MA0646.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m402_MA0767.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_3/cluster_37_node_3_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m282_MA0865.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m281_MA0471.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m670_MA1122.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_2/cluster_37_node_2_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_1/cluster_37_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_37 -name cluster_37 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_1/cluster_37_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_3/cluster_37_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_37 -name cluster_37 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_3/cluster_37_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_2/cluster_37_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_37 -name cluster_37 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_2/cluster_37_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_1/cluster_37_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224123_2b8RX0


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_2/cluster_37_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224123_kpsvHR


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_3/cluster_37_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224123_0HzIsw


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_1/cluster_37_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_2/cluster_37_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_3/cluster_37_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m196_MA0884.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m18_MA0468.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m575_MA0681.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m55_MA0713.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m56_MA0715.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_35/merged_consensuses/node_4/cluster_35_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_35/merged_consensuses/node_4/cluster_35_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_35 -name cluster_35 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_35/merged_consensuses/node_4/cluster_35_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_35/merged_consensuses/node_4/cluster_35_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224124_dKNIkC


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_35/merged_consensuses/node_4/cluster_35_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m668_MA1967.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m336_MA1945.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m311_MA1934.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m329_MA1941.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m667_MA1966.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_4/cluster_36_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_4/cluster_36_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_36 -name cluster_36 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_4/cluster_36_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_4/cluster_36_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224125_anKEfM


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_4/cluster_36_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m840_MA2579.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m400_MA0646.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m402_MA0767.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_4/cluster_37_node_4_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m691_MA0748.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m282_MA0865.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m281_MA0471.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m670_MA1122.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_5/cluster_37_node_5_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m850_MA2589.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m668_MA1967.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m336_MA1945.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m311_MA1934.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m329_MA1941.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m667_MA1966.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_5/cluster_36_node_5_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m166_MA1647.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m850_MA2589.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m668_MA1967.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m336_MA1945.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m311_MA1934.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m329_MA1941.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m667_MA1966.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_6/cluster_36_node_6_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_4/cluster_37_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_37 -name cluster_37 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_4/cluster_37_node_4_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m840_MA2579.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m400_MA0646.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m402_MA0767.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m691_MA0748.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m282_MA0865.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m281_MA0471.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m670_MA1122.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_6/cluster_37_node_6_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_5/cluster_37_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_37 -name cluster_37 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_5/cluster_37_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_5/cluster_36_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_36 -name cluster_36 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_5/cluster_36_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_6/cluster_36_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_36 -name cluster_36 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_6/cluster_36_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_6/cluster_37_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_37 -name cluster_37 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_6/cluster_37_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_4/cluster_37_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224126_0tZKol


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_5/cluster_37_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224126_xM1a5Z


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_5/cluster_36_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224126_82k95A


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_6/cluster_36_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224126_peuCIG


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_6/cluster_37_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224126_yEpzC2


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_5/cluster_36_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_4/cluster_37_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_36/merged_consensuses/node_6/cluster_36_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_5/cluster_37_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_6/cluster_37_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m827_MA2566.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m840_MA2579.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m400_MA0646.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m402_MA0767.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m691_MA0748.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m282_MA0865.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m281_MA0471.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m670_MA1122.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_7/cluster_37_node_7_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_7/cluster_37_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_37 -name cluster_37 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_7/cluster_37_node_7_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_7/cluster_37_nb_motifs_8.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224129_olijsW


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_37/merged_consensuses/node_7/cluster_37_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m6_MA0101.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m7_MA0107.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_1/cluster_38_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m529_MA0778.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m74_MA0105.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_2/cluster_38_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m795_MA2534.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m529_MA0778.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m74_MA0105.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_3/cluster_38_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_1/cluster_38_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_38 -name cluster_38 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_1/cluster_38_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_2/cluster_38_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_38 -name cluster_38 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_2/cluster_38_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_3/cluster_38_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_38 -name cluster_38 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_3/cluster_38_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_1/cluster_38_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224131_ulsD9d


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_2/cluster_38_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224131_TdaGVU


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_3/cluster_38_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224131_jVQBg9


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_2/cluster_38_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_3/cluster_38_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_1/cluster_38_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m659_MA0809.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m91_MA0808.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_1/cluster_39_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m657_MA0090.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m659_MA0809.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m91_MA0808.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_2/cluster_39_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m161_MA2097.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m201_MA1601.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_4/cluster_38_node_4_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m658_MA1121.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m657_MA0090.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m659_MA0809.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m91_MA0808.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_3/cluster_39_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_1/cluster_39_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_39 -name cluster_39 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_1/cluster_39_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_2/cluster_39_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_39 -name cluster_39 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_2/cluster_39_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_4/cluster_38_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_38 -name cluster_38 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_4/cluster_38_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_3/cluster_39_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_39 -name cluster_39 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_3/cluster_39_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_4/cluster_38_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224132_RHGVhI


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_3/cluster_39_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224132_5tD1BX


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_2/cluster_39_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224132_UKvHma


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_1/cluster_39_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224132_0ba0e4


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_4/cluster_38_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_1/cluster_39_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_3/cluster_39_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_2/cluster_39_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m250_MA0466.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m252_MA0837.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_1/cluster_4_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m268_MA0639.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m303_MA0843.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_2/cluster_4_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m227_MA0833.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m253_MA1636.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_3/cluster_4_node_3_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m6_MA0101.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m7_MA0107.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m795_MA2534.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m529_MA0778.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m74_MA0105.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_5/cluster_38_node_5_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m161_MA2097.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m201_MA1601.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m6_MA0101.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m7_MA0107.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m795_MA2534.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m529_MA0778.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m74_MA0105.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_6/cluster_38_node_6_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_3/cluster_4_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_4 -name cluster_4 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_3/cluster_4_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_2/cluster_4_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_4 -name cluster_4 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_2/cluster_4_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_1/cluster_4_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_4 -name cluster_4 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_1/cluster_4_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_5/cluster_38_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_38 -name cluster_38 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_5/cluster_38_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_6/cluster_38_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_38 -name cluster_38 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_6/cluster_38_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_3/cluster_4_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224134_cHy9DN


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_2/cluster_4_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224134_7nqXwa


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_6/cluster_38_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224134_dJIjbu


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_5/cluster_38_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224134_nqfYPL


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_1/cluster_4_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224134_DPeOwS


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_3/cluster_4_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_2/cluster_4_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_6/cluster_38_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_38/merged_consensuses/node_5/cluster_38_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_1/cluster_4_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m421_MA0043.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m526_MA0025.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_5/cluster_4_node_5_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m98_MA0838.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m250_MA0466.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m252_MA0837.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_4/cluster_4_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_4/cluster_4_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_4 -name cluster_4 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_4/cluster_4_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_5/cluster_4_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_4 -name cluster_4 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_5/cluster_4_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_5/cluster_4_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224136_MoedeM


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_4/cluster_4_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224136_7hYQOj


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_5/cluster_4_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_4/cluster_4_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m14_MA0152.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m520_MA0625.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_4/cluster_39_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_4/cluster_39_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_39 -name cluster_39 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_4/cluster_39_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_4/cluster_39_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224137_mmIIIQ


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_4/cluster_39_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m249_MA0102.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m98_MA0838.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m250_MA0466.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m252_MA0837.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_6/cluster_4_node_6_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m869_MA2676.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m658_MA1121.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m657_MA0090.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m659_MA0809.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m91_MA0808.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_5/cluster_39_node_5_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_6/cluster_4_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_4 -name cluster_4 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_6/cluster_4_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_5/cluster_39_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_39 -name cluster_39 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_5/cluster_39_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_6/cluster_4_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224138_tNm4FV


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_5/cluster_39_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224138_32hvuh


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_5/cluster_39_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_6/cluster_4_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m522_MA0670.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m527_MA0671.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_1/cluster_40_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m573_MA1114.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m577_MA0782.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_2/cluster_40_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m499_MA0775.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m71_MA0774.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_3/cluster_40_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_1/cluster_40_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_40 -name cluster_40 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_1/cluster_40_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_2/cluster_40_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_40 -name cluster_40 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_2/cluster_40_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_3/cluster_40_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_40 -name cluster_40 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_3/cluster_40_node_3_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m268_MA0639.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m303_MA0843.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m421_MA0043.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m526_MA0025.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_7/cluster_4_node_7_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m251_MA0836.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m249_MA0102.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m98_MA0838.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m250_MA0466.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m252_MA0837.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_8/cluster_4_node_8_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_7/cluster_4_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_4 -name cluster_4 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_7/cluster_4_node_7_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_8/cluster_4_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_4 -name cluster_4 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_8/cluster_4_node_8_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_8/cluster_4_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224139_2bz0Io


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_7/cluster_4_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224139_jpvVsh


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_2/cluster_40_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224139_Abd21L


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_1/cluster_40_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224139_O1xMiR


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_3/cluster_40_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224139_1KCjSf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_7/cluster_4_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_8/cluster_4_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_2/cluster_40_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_3/cluster_40_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_1/cluster_40_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m521_MA1525.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m14_MA0152.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m520_MA0625.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_6/cluster_39_node_6_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m603_MA1116.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m604_MA1117.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_7/cluster_39_node_7_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_6/cluster_39_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_39 -name cluster_39 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_6/cluster_39_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_7/cluster_39_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_39 -name cluster_39 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_7/cluster_39_node_7_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_7/cluster_39_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224140_hWbPhd


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_6/cluster_39_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224140_zN2qDu


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_7/cluster_39_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_6/cluster_39_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m524_MA0161.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m522_MA0670.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m527_MA0671.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_4/cluster_40_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_4/cluster_40_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_40 -name cluster_40 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_4/cluster_40_node_4_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m521_MA1525.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m14_MA0152.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m520_MA0625.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m603_MA1116.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m604_MA1117.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_8/cluster_39_node_8_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_8/cluster_39_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_39 -name cluster_39 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_8/cluster_39_node_8_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_4/cluster_40_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224141_CgjDdN


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_8/cluster_39_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224141_18YSLv


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_4/cluster_40_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_8/cluster_39_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m496_MA0498.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m499_MA0775.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m71_MA0774.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_5/cluster_40_node_5_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_5/cluster_40_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_40 -name cluster_40 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_5/cluster_40_node_5_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m869_MA2676.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m658_MA1121.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m657_MA0090.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m659_MA0809.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m91_MA0808.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m521_MA1525.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m14_MA0152.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m520_MA0625.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m603_MA1116.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m604_MA1117.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_9/cluster_39_node_9_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_9/cluster_39_node_9_cat.tf -v 0 -in_format tf -out_format tf -id cluster_39 -name cluster_39 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_9/cluster_39_node_9_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_5/cluster_40_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224142_WuDlDs


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_9/cluster_39_nb_motifs_10.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224142_icBooY


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_5/cluster_40_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_39/merged_consensuses/node_9/cluster_39_node_9_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m227_MA0833.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m253_MA1636.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m268_MA0639.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m303_MA0843.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m421_MA0043.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m526_MA0025.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_9/cluster_4_node_9_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_9/cluster_4_node_9_cat.tf -v 0 -in_format tf -out_format tf -id cluster_4 -name cluster_4 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_9/cluster_4_node_9_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_9/cluster_4_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224143_N9vLMm


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_9/cluster_4_node_9_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m251_MA0836.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m249_MA0102.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m98_MA0838.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m250_MA0466.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m252_MA0837.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m227_MA0833.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m253_MA1636.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m268_MA0639.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m303_MA0843.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m421_MA0043.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m526_MA0025.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_10/cluster_4_node_10_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_10/cluster_4_node_10_cat.tf -v 0 -in_format tf -out_format tf -id cluster_4 -name cluster_4 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_10/cluster_4_node_10_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_10/cluster_4_nb_motifs_11.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224145_vG3jsE


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_10/cluster_4_node_10_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m573_MA1114.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m577_MA0782.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m496_MA0498.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m499_MA0775.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m71_MA0774.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_6/cluster_40_node_6_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_6/cluster_40_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_40 -name cluster_40 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_6/cluster_40_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_6/cluster_40_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224146_mcGlvn


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_6/cluster_40_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m418_MA0738.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m524_MA0161.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m522_MA0670.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m527_MA0671.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_7/cluster_40_node_7_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_7/cluster_40_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_40 -name cluster_40 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_7/cluster_40_node_7_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m860_MA2599.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m251_MA0836.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m249_MA0102.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m98_MA0838.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m250_MA0466.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m252_MA0837.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m227_MA0833.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m253_MA1636.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m268_MA0639.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m303_MA0843.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m421_MA0043.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m526_MA0025.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_11/cluster_4_node_11_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_11/cluster_4_node_11_cat.tf -v 0 -in_format tf -out_format tf -id cluster_4 -name cluster_4 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_11/cluster_4_node_11_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_7/cluster_40_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224147_o4nGa5


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_11/cluster_4_nb_motifs_12.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224147_l2zHtw


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_7/cluster_40_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_4/merged_consensuses/node_11/cluster_4_node_11_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m573_MA1114.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m577_MA0782.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m496_MA0498.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m499_MA0775.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m71_MA0774.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m418_MA0738.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m524_MA0161.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m522_MA0670.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m527_MA0671.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_8/cluster_40_node_8_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_8/cluster_40_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_40 -name cluster_40 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_8/cluster_40_node_8_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_8/cluster_40_nb_motifs_9.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224149_ET8AJn


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_40/merged_consensuses/node_8/cluster_40_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m598_MA1149.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m59_MA0730.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_41/merged_consensuses/node_1/cluster_41_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_41/merged_consensuses/node_1/cluster_41_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_41 -name cluster_41 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_41/merged_consensuses/node_1/cluster_41_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_41/merged_consensuses/node_1/cluster_41_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224152_wmyf3q


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_41/merged_consensuses/node_1/cluster_41_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m16_MA0159.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m598_MA1149.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m59_MA0730.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_41/merged_consensuses/node_2/cluster_41_node_2_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_41/merged_consensuses/node_2/cluster_41_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_41 -name cluster_41 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_41/merged_consensuses/node_2/cluster_41_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_41/merged_consensuses/node_2/cluster_41_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224153_MWKbN1


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_41/merged_consensuses/node_2/cluster_41_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m22_MA0258.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m320_MA0112.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_42/merged_consensuses/node_1/cluster_42_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_42/merged_consensuses/node_1/cluster_42_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_42 -name cluster_42 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_42/merged_consensuses/node_1/cluster_42_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_42/merged_consensuses/node_1/cluster_42_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224155_8ycLlS


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_42/merged_consensuses/node_1/cluster_42_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m593_MA0066.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m22_MA0258.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m320_MA0112.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_42/merged_consensuses/node_2/cluster_42_node_2_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_42/merged_consensuses/node_2/cluster_42_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_42 -name cluster_42 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_42/merged_consensuses/node_2/cluster_42_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_42/merged_consensuses/node_2/cluster_42_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224157_cnuYOu


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_42/merged_consensuses/node_2/cluster_42_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m198_MA1532.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m543_MA1531.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_43/merged_consensuses/node_1/cluster_43_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_43/merged_consensuses/node_1/cluster_43_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_43 -name cluster_43 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_43/merged_consensuses/node_1/cluster_43_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_43/merged_consensuses/node_1/cluster_43_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224200_LWNH9Y


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_43/merged_consensuses/node_1/cluster_43_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m458_MA1419.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m460_MA0652.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_1/cluster_44_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m121_MA1420.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m37_MA0653.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_2/cluster_44_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m459_MA0772.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m458_MA1419.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m460_MA0652.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_3/cluster_44_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_1/cluster_44_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_44 -name cluster_44 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_1/cluster_44_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_2/cluster_44_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_44 -name cluster_44 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_2/cluster_44_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_3/cluster_44_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_44 -name cluster_44 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_3/cluster_44_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_3/cluster_44_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224202_Taz76j


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_1/cluster_44_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224202_G7hajC


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_2/cluster_44_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224202_pWGTk7


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_3/cluster_44_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_1/cluster_44_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_2/cluster_44_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m809_MA2548.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m810_MA2549.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_45/merged_consensuses/node_1/cluster_45_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_45/merged_consensuses/node_1/cluster_45_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_45 -name cluster_45 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_45/merged_consensuses/node_1/cluster_45_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_45/merged_consensuses/node_1/cluster_45_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224203_QO1zjG


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_45/merged_consensuses/node_1/cluster_45_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m121_MA1420.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m37_MA0653.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m459_MA0772.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m458_MA1419.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m460_MA0652.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_4/cluster_44_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_4/cluster_44_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_44 -name cluster_44 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_4/cluster_44_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_4/cluster_44_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224204_lqMyzy


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_4/cluster_44_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m24_MA0095.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m706_MA1651.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_46/merged_consensuses/node_1/cluster_46_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_46/merged_consensuses/node_1/cluster_46_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_46 -name cluster_46 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_46/merged_consensuses/node_1/cluster_46_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_46/merged_consensuses/node_1/cluster_46_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224205_SwihHb


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_46/merged_consensuses/node_1/cluster_46_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m58_MA0729.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m198_MA1532.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m543_MA1531.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_43/merged_consensuses/node_2/cluster_43_node_2_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_43/merged_consensuses/node_2/cluster_43_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_43 -name cluster_43 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_43/merged_consensuses/node_2/cluster_43_node_2_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m23_MA0050.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m456_MA0051.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_6/cluster_44_node_6_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m644_MA0517.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m121_MA1420.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m37_MA0653.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m459_MA0772.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m458_MA1419.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m460_MA0652.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_5/cluster_44_node_5_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_6/cluster_44_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_44 -name cluster_44 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_6/cluster_44_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_5/cluster_44_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_44 -name cluster_44 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_5/cluster_44_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_43/merged_consensuses/node_2/cluster_43_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224207_mv1AO2


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_5/cluster_44_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224207_brTiDR


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_6/cluster_44_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224207_yVopCK


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_5/cluster_44_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_43/merged_consensuses/node_2/cluster_43_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_6/cluster_44_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m489_MA0495.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m559_MA0842.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_1/cluster_47_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m726_MA1593.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m740_MA2495.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_3/cluster_47_node_3_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m169_MA0659.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m489_MA0495.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m559_MA0842.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_2/cluster_47_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m130_MA1509.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m693_MA1971.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_7/cluster_44_node_7_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_3/cluster_47_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_47 -name cluster_47 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_3/cluster_47_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_1/cluster_47_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_47 -name cluster_47 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_1/cluster_47_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_2/cluster_47_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_47 -name cluster_47 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_2/cluster_47_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_7/cluster_44_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_44 -name cluster_44 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_7/cluster_44_node_7_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_2/cluster_47_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224208_BmS03w


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_1/cluster_47_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224208_ed2pyK


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_3/cluster_47_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224208_uw6Gws


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_7/cluster_44_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224208_uM4DYq


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_2/cluster_47_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_1/cluster_47_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_3/cluster_47_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_7/cluster_44_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m169_MA0659.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m489_MA0495.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m559_MA0842.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m726_MA1593.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m740_MA2495.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_4/cluster_47_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_4/cluster_47_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_47 -name cluster_47 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_4/cluster_47_node_4_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m457_MA1418.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m644_MA0517.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m121_MA1420.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m37_MA0653.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m459_MA0772.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m458_MA1419.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m460_MA0652.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_8/cluster_44_node_8_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m23_MA0050.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m456_MA0051.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m457_MA1418.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m644_MA0517.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m121_MA1420.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m37_MA0653.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m459_MA0772.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m458_MA1419.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m460_MA0652.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_9/cluster_44_node_9_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_8/cluster_44_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_44 -name cluster_44 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_8/cluster_44_node_8_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_9/cluster_44_node_9_cat.tf -v 0 -in_format tf -out_format tf -id cluster_44 -name cluster_44 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_9/cluster_44_node_9_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_4/cluster_47_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224210_cutGzN


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_9/cluster_44_nb_motifs_9.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224210_NSS8IL


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_8/cluster_44_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224210_E0Gw8W


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_4/cluster_47_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_9/cluster_44_node_9_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_8/cluster_44_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m793_MA2532.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m169_MA0659.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m489_MA0495.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m559_MA0842.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m726_MA1593.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m740_MA2495.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_5/cluster_47_node_5_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m130_MA1509.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m693_MA1971.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m23_MA0050.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m456_MA0051.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m457_MA1418.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m644_MA0517.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m121_MA1420.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m37_MA0653.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m459_MA0772.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m458_MA1419.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m460_MA0652.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_10/cluster_44_node_10_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_5/cluster_47_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_47 -name cluster_47 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_5/cluster_47_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_10/cluster_44_node_10_cat.tf -v 0 -in_format tf -out_format tf -id cluster_44 -name cluster_44 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_10/cluster_44_node_10_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_5/cluster_47_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224213_nzHaEQ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_10/cluster_44_nb_motifs_11.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224213_kgjG8J


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_44/merged_consensuses/node_10/cluster_44_node_10_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_47/merged_consensuses/node_5/cluster_47_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m545_MA1533.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m5_MA0074.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_48/merged_consensuses/node_1/cluster_48_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_48/merged_consensuses/node_1/cluster_48_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_48 -name cluster_48 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_48/merged_consensuses/node_1/cluster_48_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_48/merged_consensuses/node_1/cluster_48_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224215_x0QQU7


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_48/merged_consensuses/node_1/cluster_48_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m106_MA0525.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m107_MA0106.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_49/merged_consensuses/node_1/cluster_49_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_49/merged_consensuses/node_1/cluster_49_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_49 -name cluster_49 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_49/merged_consensuses/node_1/cluster_49_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_49/merged_consensuses/node_1/cluster_49_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224217_HK5odb


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_49/merged_consensuses/node_1/cluster_49_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m679_MA0861.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m106_MA0525.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m107_MA0106.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_49/merged_consensuses/node_2/cluster_49_node_2_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_49/merged_consensuses/node_2/cluster_49_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_49 -name cluster_49 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_49/merged_consensuses/node_2/cluster_49_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_49/merged_consensuses/node_2/cluster_49_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224220_5QuZsp


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_49/merged_consensuses/node_2/cluster_49_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m509_MA0666.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m510_MA0708.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_1/cluster_5_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m342_MA0887.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m343_MA0888.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_2/cluster_5_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m306_MA0612.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m307_MA0886.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_3/cluster_5_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_1/cluster_5_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_1/cluster_5_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_3/cluster_5_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_3/cluster_5_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_2/cluster_5_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_2/cluster_5_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_2/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224221_OXL3kL


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_1/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224221_LbmAo2


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_3/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224221_Rz9Wik


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_2/cluster_5_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_1/cluster_5_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_3/cluster_5_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m562_MA1542.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m563_MA1646.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_50/merged_consensuses/node_1/cluster_50_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_50/merged_consensuses/node_1/cluster_50_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_50 -name cluster_50 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_50/merged_consensuses/node_1/cluster_50_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_50/merged_consensuses/node_1/cluster_50_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224222_kn3Q1j


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_50/merged_consensuses/node_1/cluster_50_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_4/cluster_5_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_4/cluster_5_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_4/cluster_5_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_4/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224223_Vseqkx


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_4/cluster_5_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m439_MA1502.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m453_MA0910.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_5/cluster_5_node_5_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m445_MA1504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m452_MA1507.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_6/cluster_5_node_6_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_6/cluster_5_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_6/cluster_5_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_5/cluster_5_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_5/cluster_5_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_6/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224224_jfvI3f


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_5/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224224_B4UhKZ


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_6/cluster_5_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_5/cluster_5_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m301_MA1933.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m319_MA1939.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_51/merged_consensuses/node_1/cluster_51_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m168_MA2101.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m829_MA2568.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_52/merged_consensuses/node_2/cluster_52_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m718_MA1725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m730_MA1655.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_52/merged_consensuses/node_1/cluster_52_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m756_MA1730.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m718_MA1725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m730_MA1655.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_52/merged_consensuses/node_3/cluster_52_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_51/merged_consensuses/node_1/cluster_51_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_51 -name cluster_51 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_51/merged_consensuses/node_1/cluster_51_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_52/merged_consensuses/node_1/cluster_52_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_52 -name cluster_52 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_52/merged_consensuses/node_1/cluster_52_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_52/merged_consensuses/node_2/cluster_52_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_52 -name cluster_52 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_52/merged_consensuses/node_2/cluster_52_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_52/merged_consensuses/node_3/cluster_52_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_52 -name cluster_52 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_52/merged_consensuses/node_3/cluster_52_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_52/merged_consensuses/node_1/cluster_52_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224225_ae7A1e


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_51/merged_consensuses/node_1/cluster_51_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224225_9Sp3aU


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_52/merged_consensuses/node_3/cluster_52_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224225_XYyUB4


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_52/merged_consensuses/node_2/cluster_52_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224225_nvjM95


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_52/merged_consensuses/node_1/cluster_52_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_52/merged_consensuses/node_2/cluster_52_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_52/merged_consensuses/node_3/cluster_52_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_51/merged_consensuses/node_1/cluster_51_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_7/cluster_5_node_7_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_9/cluster_5_node_9_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_8/cluster_5_node_8_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m168_MA2101.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m829_MA2568.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m756_MA1730.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m718_MA1725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m730_MA1655.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_52/merged_consensuses/node_4/cluster_52_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_7/cluster_5_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_7/cluster_5_node_7_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_9/cluster_5_node_9_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_9/cluster_5_node_9_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_8/cluster_5_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_8/cluster_5_node_8_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_52/merged_consensuses/node_4/cluster_52_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_52 -name cluster_52 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_52/merged_consensuses/node_4/cluster_52_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_52/merged_consensuses/node_4/cluster_52_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224226_n0najf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_8/cluster_5_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224226_yndVDz


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_7/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224226_O2mmzZ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_9/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224226_fs5dJh


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_8/cluster_5_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_52/merged_consensuses/node_4/cluster_52_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_7/cluster_5_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_9/cluster_5_node_9_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m674_MA1969.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m677_MA1576.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_53/merged_consensuses/node_1/cluster_53_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_53/merged_consensuses/node_1/cluster_53_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_53 -name cluster_53 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_53/merged_consensuses/node_1/cluster_53_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_53/merged_consensuses/node_1/cluster_53_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224227_IQp9yO


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_53/merged_consensuses/node_1/cluster_53_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m399_MA0890.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_10/cluster_5_node_10_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_10/cluster_5_node_10_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_10/cluster_5_node_10_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_10/cluster_5_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224228_SzxzEx


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_10/cluster_5_node_10_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m272_MA1707.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m274_MA1479.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_54/merged_consensuses/node_2/cluster_54_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m271_MA0610.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m273_MA1478.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_54/merged_consensuses/node_1/cluster_54_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m271_MA0610.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m273_MA1478.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m272_MA1707.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m274_MA1479.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_54/merged_consensuses/node_3/cluster_54_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_54/merged_consensuses/node_2/cluster_54_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_54 -name cluster_54 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_54/merged_consensuses/node_2/cluster_54_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_54/merged_consensuses/node_1/cluster_54_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_54 -name cluster_54 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_54/merged_consensuses/node_1/cluster_54_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_54/merged_consensuses/node_3/cluster_54_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_54 -name cluster_54 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_54/merged_consensuses/node_3/cluster_54_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_54/merged_consensuses/node_2/cluster_54_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224229_WoCbnH


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_54/merged_consensuses/node_1/cluster_54_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224229_6w6ZqV


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_54/merged_consensuses/node_3/cluster_54_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224229_XtizM7


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_54/merged_consensuses/node_2/cluster_54_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_54/merged_consensuses/node_1/cluster_54_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_54/merged_consensuses/node_3/cluster_54_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m772_MA2511.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m886_MA0750.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_1/cluster_55_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m578_MA1548.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m754_MA1986.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_2/cluster_55_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m864_MA2603.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m891_MA1976.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_3/cluster_55_node_3_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m727_MA2493.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m271_MA0610.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m273_MA1478.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m272_MA1707.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m274_MA1479.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_54/merged_consensuses/node_4/cluster_54_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_1/cluster_55_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_55 -name cluster_55 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_1/cluster_55_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_2/cluster_55_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_55 -name cluster_55 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_2/cluster_55_node_2_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_11/cluster_5_node_11_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_3/cluster_55_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_55 -name cluster_55 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_3/cluster_55_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_54/merged_consensuses/node_4/cluster_54_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_54 -name cluster_54 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_54/merged_consensuses/node_4/cluster_54_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_11/cluster_5_node_11_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_11/cluster_5_node_11_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_11/cluster_5_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224230_JJm9SD


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_3/cluster_55_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224230_wj69cQ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_54/merged_consensuses/node_4/cluster_54_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224230_GQy95H


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_1/cluster_55_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224230_OYDNmo


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_2/cluster_55_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224230_8wDlgJ


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_11/cluster_5_node_11_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_3/cluster_55_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_54/merged_consensuses/node_4/cluster_54_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_2/cluster_55_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_1/cluster_55_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m578_MA1548.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m754_MA1986.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m864_MA2603.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m891_MA1976.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_4/cluster_55_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_4/cluster_55_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_55 -name cluster_55 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_4/cluster_55_node_4_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m408_MA0648.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m409_MA0891.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_13/cluster_5_node_13_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m462_MA0654.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m399_MA0890.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_12/cluster_5_node_12_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_13/cluster_5_node_13_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_13/cluster_5_node_13_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_12/cluster_5_node_12_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_12/cluster_5_node_12_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_4/cluster_55_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224231_mW8g3H


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_13/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224231_wynEMj


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_12/cluster_5_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224231_1R36Pe


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_4/cluster_55_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_13/cluster_5_node_13_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_12/cluster_5_node_12_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m772_MA2511.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m886_MA0750.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m578_MA1548.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m754_MA1986.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m864_MA2603.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m891_MA1976.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_5/cluster_55_node_5_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_5/cluster_55_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_55 -name cluster_55 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_5/cluster_55_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_5/cluster_55_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224232_2kaX3q


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_55/merged_consensuses/node_5/cluster_55_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m615_MA0684.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m85_MA0511.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_56/merged_consensuses/node_1/cluster_56_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m702_MA0694.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m887_MA0695.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_56/merged_consensuses/node_2/cluster_56_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m1_MA0002.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m615_MA0684.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m85_MA0511.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_56/merged_consensuses/node_3/cluster_56_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_56/merged_consensuses/node_2/cluster_56_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_56 -name cluster_56 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_56/merged_consensuses/node_2/cluster_56_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_56/merged_consensuses/node_1/cluster_56_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_56 -name cluster_56 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_56/merged_consensuses/node_1/cluster_56_node_1_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m688_MA0725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m689_MA0726.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_14/cluster_5_node_14_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_56/merged_consensuses/node_3/cluster_56_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_56 -name cluster_56 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_56/merged_consensuses/node_3/cluster_56_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_14/cluster_5_node_14_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_14/cluster_5_node_14_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_14/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224233_NGl9vL


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_56/merged_consensuses/node_2/cluster_56_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224233_YwEUY9


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_56/merged_consensuses/node_1/cluster_56_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224233_IXHdnY


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_56/merged_consensuses/node_3/cluster_56_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224233_ZJbHXF


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_14/cluster_5_node_14_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_56/merged_consensuses/node_2/cluster_56_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_56/merged_consensuses/node_1/cluster_56_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_56/merged_consensuses/node_3/cluster_56_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m270_MA0882.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m619_MA0630.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_15/cluster_5_node_15_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_15/cluster_5_node_15_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_15/cluster_5_node_15_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_15/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224234_1zDLAw


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_15/cluster_5_node_15_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m702_MA0694.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m887_MA0695.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m1_MA0002.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m615_MA0684.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m85_MA0511.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_56/merged_consensuses/node_4/cluster_56_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_56/merged_consensuses/node_4/cluster_56_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_56 -name cluster_56 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_56/merged_consensuses/node_4/cluster_56_node_4_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m678_MA1577.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m462_MA0654.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m399_MA0890.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_16/cluster_5_node_16_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_16/cluster_5_node_16_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_16/cluster_5_node_16_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_56/merged_consensuses/node_4/cluster_56_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224235_FaeDW5


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_16/cluster_5_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224235_4XVOZf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_56/merged_consensuses/node_4/cluster_56_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_16/cluster_5_node_16_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m784_MA2523.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m856_MA2595.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_57/merged_consensuses/node_1/cluster_57_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_57/merged_consensuses/node_1/cluster_57_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_57 -name cluster_57 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_57/merged_consensuses/node_1/cluster_57_node_1_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m382_MA0682.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m576_MA0714.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_17/cluster_5_node_17_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_17/cluster_5_node_17_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_17/cluster_5_node_17_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_17/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224236_N4QYjv


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_57/merged_consensuses/node_1/cluster_57_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224236_a3JTi0


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_57/merged_consensuses/node_1/cluster_57_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_17/cluster_5_node_17_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_18/cluster_5_node_18_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m435_MA1499.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m445_MA1504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m452_MA1507.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_19/cluster_5_node_19_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m180_MA2119.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m500_MA0661.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_20/cluster_5_node_20_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_18/cluster_5_node_18_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_18/cluster_5_node_18_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_19/cluster_5_node_19_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_19/cluster_5_node_19_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_20/cluster_5_node_20_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_20/cluster_5_node_20_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_20/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224238_9W9B05


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_18/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224238_HyIggo


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_19/cluster_5_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224238_OXtjTT


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_18/cluster_5_node_18_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_20/cluster_5_node_20_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_19/cluster_5_node_19_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m380_MA0479.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m517_MA0056.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_58/merged_consensuses/node_1/cluster_58_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m65_MA0758.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m769_MA2508.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_59/merged_consensuses/node_1/cluster_59_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_58/merged_consensuses/node_1/cluster_58_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_58 -name cluster_58 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_58/merged_consensuses/node_1/cluster_58_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_59/merged_consensuses/node_1/cluster_59_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_59 -name cluster_59 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_59/merged_consensuses/node_1/cluster_59_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_59/merged_consensuses/node_1/cluster_59_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224239_0PZhor


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_58/merged_consensuses/node_1/cluster_58_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224239_8llp2B


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_59/merged_consensuses/node_1/cluster_59_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_58/merged_consensuses/node_1/cluster_58_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m434_MA0903.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m574_MA0132.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_22/cluster_5_node_22_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m410_MA0892.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m434_MA0903.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m574_MA0132.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_23/cluster_5_node_23_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m270_MA0882.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m619_MA0630.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_21/cluster_5_node_21_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_22/cluster_5_node_22_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_22/cluster_5_node_22_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_23/cluster_5_node_23_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_23/cluster_5_node_23_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_21/cluster_5_node_21_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_21/cluster_5_node_21_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_22/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224240_vZ1wku


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_23/cluster_5_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224240_jqhnJH


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_21/cluster_5_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224240_7AtOqh


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_23/cluster_5_node_23_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_21/cluster_5_node_21_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_22/cluster_5_node_22_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m11_MA0130.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m380_MA0479.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m517_MA0056.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_58/merged_consensuses/node_2/cluster_58_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m206_MA2469.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m373_MA1683.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_1/cluster_6_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m178_MA2117.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m383_MA0852.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_3/cluster_6_node_3_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m389_MA0481.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m206_MA2469.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m373_MA1683.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_2/cluster_6_node_2_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_58/merged_consensuses/node_2/cluster_58_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_58 -name cluster_58 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_58/merged_consensuses/node_2/cluster_58_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_1/cluster_6_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_1/cluster_6_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_2/cluster_6_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_2/cluster_6_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_3/cluster_6_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_3/cluster_6_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_1/cluster_6_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224241_0J2kLY


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_3/cluster_6_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224241_glFQqQ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_58/merged_consensuses/node_2/cluster_58_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224241_quoJdU


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_2/cluster_6_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224241_uEsLVl


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_1/cluster_6_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_3/cluster_6_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_58/merged_consensuses/node_2/cluster_58_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_2/cluster_6_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m235_MA0875.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m246_MA0876.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_24/cluster_5_node_24_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m276_MA1481.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m270_MA0882.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m619_MA0630.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_25/cluster_5_node_25_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_24/cluster_5_node_24_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_24/cluster_5_node_24_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_25/cluster_5_node_25_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_25/cluster_5_node_25_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_24/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224242_l54ew3


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_25/cluster_5_nb_motifs_8.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224242_TKxWqO


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_24/cluster_5_node_24_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_25/cluster_5_node_25_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m440_MA1503.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m447_MA0485.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_4/cluster_6_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_4/cluster_6_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_4/cluster_6_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_4/cluster_6_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224243_Cqax82


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_4/cluster_6_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m431_MA0594.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m567_MA1545.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_60/merged_consensuses/node_1/cluster_60_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m72_MA0776.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m73_MA0777.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_60/merged_consensuses/node_3/cluster_60_node_3_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m566_MA1544.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m431_MA0594.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m567_MA1545.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_60/merged_consensuses/node_2/cluster_60_node_2_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_60/merged_consensuses/node_3/cluster_60_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_60 -name cluster_60 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_60/merged_consensuses/node_3/cluster_60_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_60/merged_consensuses/node_1/cluster_60_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_60 -name cluster_60 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_60/merged_consensuses/node_1/cluster_60_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_60/merged_consensuses/node_2/cluster_60_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_60 -name cluster_60 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_60/merged_consensuses/node_2/cluster_60_node_2_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m295_MA1495.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m436_MA0904.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_26/cluster_5_node_26_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_26/cluster_5_node_26_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_26/cluster_5_node_26_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_60/merged_consensuses/node_1/cluster_60_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224244_mQ5P1O


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_60/merged_consensuses/node_3/cluster_60_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224244_rSgwrx


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_26/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224244_vTqmfo


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_60/merged_consensuses/node_2/cluster_60_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224244_3YGmIS


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_60/merged_consensuses/node_2/cluster_60_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_60/merged_consensuses/node_3/cluster_60_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_26/cluster_5_node_26_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_60/merged_consensuses/node_1/cluster_60_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m384_MA1103.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m389_MA0481.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m206_MA2469.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m373_MA1683.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_5/cluster_6_node_5_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_5/cluster_6_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_5/cluster_6_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_5/cluster_6_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224245_ki8cQl


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_5/cluster_6_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m32_MA0042.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m178_MA2117.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m383_MA0852.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_6/cluster_6_node_6_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m566_MA1544.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m431_MA0594.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m567_MA1545.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m72_MA0776.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m73_MA0777.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_60/merged_consensuses/node_4/cluster_60_node_4_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_6/cluster_6_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_6/cluster_6_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_60/merged_consensuses/node_4/cluster_60_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_60 -name cluster_60 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_60/merged_consensuses/node_4/cluster_60_node_4_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m478_MA0699.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m678_MA1577.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m462_MA0654.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m399_MA0890.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_27/cluster_5_node_27_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_27/cluster_5_node_27_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_27/cluster_5_node_27_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_60/merged_consensuses/node_4/cluster_60_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224246_w3N2Dn


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_6/cluster_6_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224246_97FdPK


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_27/cluster_5_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224246_HV8GkL


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_60/merged_consensuses/node_4/cluster_60_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_27/cluster_5_node_27_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_6/cluster_6_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m308_MA0027.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m276_MA1481.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m270_MA0882.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m619_MA0630.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_28/cluster_5_node_28_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_28/cluster_5_node_28_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_28/cluster_5_node_28_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_28/cluster_5_nb_motifs_9.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224248_BA1c1l


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_28/cluster_5_node_28_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m101_MA0848.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m102_MA0849.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_8/cluster_6_node_8_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m384_MA1103.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m389_MA0481.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m206_MA2469.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m373_MA1683.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m32_MA0042.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m178_MA2117.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m383_MA0852.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_7/cluster_6_node_7_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_8/cluster_6_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_8/cluster_6_node_8_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_7/cluster_6_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_7/cluster_6_node_7_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m478_MA0699.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m678_MA1577.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m462_MA0654.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m399_MA0890.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m308_MA0027.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m276_MA1481.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m270_MA0882.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m619_MA0630.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_29/cluster_5_node_29_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_29/cluster_5_node_29_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_29/cluster_5_node_29_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_8/cluster_6_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224249_TpsuAi


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_7/cluster_6_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224249_1hm9LX


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_29/cluster_5_nb_motifs_15.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224249_ycOHCH


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_8/cluster_6_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_7/cluster_6_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_29/cluster_5_node_29_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m763_MA1721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m799_MA2538.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_61/merged_consensuses/node_1/cluster_61_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_61/merged_consensuses/node_1/cluster_61_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_61 -name cluster_61 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_61/merged_consensuses/node_1/cluster_61_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_61/merged_consensuses/node_1/cluster_61_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224250_EoRyRa


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_61/merged_consensuses/node_1/cluster_61_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m375_MA0031.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m384_MA1103.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m389_MA0481.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m206_MA2469.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m373_MA1683.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m32_MA0042.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m178_MA2117.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m383_MA0852.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_9/cluster_6_node_9_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_9/cluster_6_node_9_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_9/cluster_6_node_9_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m432_MA0902.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m686_MA0723.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_30/cluster_5_node_30_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_30/cluster_5_node_30_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_30/cluster_5_node_30_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_30/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224251_UyQ828


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_9/cluster_6_nb_motifs_8.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224251_Dw75KN


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_30/cluster_5_node_30_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_9/cluster_6_node_9_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m711_MA1585.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m819_MA2558.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_62/merged_consensuses/node_1/cluster_62_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_62/merged_consensuses/node_1/cluster_62_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_62 -name cluster_62 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_62/merged_consensuses/node_1/cluster_62_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_62/merged_consensuses/node_1/cluster_62_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224253_dmGC97


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_62/merged_consensuses/node_1/cluster_62_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m443_MA0906.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m448_MA1506.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_10/cluster_6_node_10_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_10/cluster_6_node_10_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_10/cluster_6_node_10_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m323_MA0644.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_31/cluster_5_node_31_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_31/cluster_5_node_31_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_31/cluster_5_node_31_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_10/cluster_6_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224254_WlnBQ7


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_31/cluster_5_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224254_rdXY7i


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_10/cluster_6_node_10_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_31/cluster_5_node_31_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m449_MA0908.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m440_MA1503.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m447_MA0485.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_11/cluster_6_node_11_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m145_MA1587.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m148_MA1596.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_63/merged_consensuses/node_1/cluster_63_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_11/cluster_6_node_11_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_11/cluster_6_node_11_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_63/merged_consensuses/node_1/cluster_63_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_63 -name cluster_63 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_63/merged_consensuses/node_1/cluster_63_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_63/merged_consensuses/node_1/cluster_63_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224256_kHB4nT


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_11/cluster_6_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224256_s0Vs3i


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_63/merged_consensuses/node_1/cluster_63_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_11/cluster_6_node_11_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m540_MA0675.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m410_MA0892.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m434_MA0903.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m574_MA0132.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_32/cluster_5_node_32_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m564_MA0711.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m408_MA0648.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m409_MA0891.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_33/cluster_5_node_33_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_33/cluster_5_node_33_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_33/cluster_5_node_33_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_32/cluster_5_node_32_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_32/cluster_5_node_32_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_33/cluster_5_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224257_IWcmqw


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_32/cluster_5_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224257_m52fX9


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_32/cluster_5_node_32_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_33/cluster_5_node_33_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m849_MA2588.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m863_MA2602.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_64/merged_consensuses/node_1/cluster_64_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_64/merged_consensuses/node_1/cluster_64_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_64 -name cluster_64 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_64/merged_consensuses/node_1/cluster_64_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_64/merged_consensuses/node_1/cluster_64_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224258_ghoDxj


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_64/merged_consensuses/node_1/cluster_64_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m101_MA0848.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m102_MA0849.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m375_MA0031.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m384_MA1103.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m389_MA0481.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m206_MA2469.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m373_MA1683.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m32_MA0042.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m178_MA2117.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m383_MA0852.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_12/cluster_6_node_12_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_12/cluster_6_node_12_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_12/cluster_6_node_12_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_12/cluster_6_nb_motifs_10.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224259_SrZLzH


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_12/cluster_6_node_12_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m450_MA0873.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m443_MA0906.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m448_MA1506.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_13/cluster_6_node_13_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m298_MA0014.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m849_MA2588.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m863_MA2602.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_64/merged_consensuses/node_2/cluster_64_node_2_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_13/cluster_6_node_13_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_13/cluster_6_node_13_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_64/merged_consensuses/node_2/cluster_64_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_64 -name cluster_64 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_64/merged_consensuses/node_2/cluster_64_node_2_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m269_MA0879.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m509_MA0666.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m510_MA0708.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_34/cluster_5_node_34_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m437_MA1500.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m439_MA1502.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m453_MA0910.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_35/cluster_5_node_35_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m156_MA2093.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m501_MA0706.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_36/cluster_5_node_36_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_35/cluster_5_node_35_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_35/cluster_5_node_35_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_34/cluster_5_node_34_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_34/cluster_5_node_34_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_36/cluster_5_node_36_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_36/cluster_5_node_36_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_13/cluster_6_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224300_3310Ee


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_64/merged_consensuses/node_2/cluster_64_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224300_Hapfvd


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_35/cluster_5_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224300_KbRkRQ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_36/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224300_D1AuyA


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_34/cluster_5_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224300_JWkXU5


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_13/cluster_6_node_13_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_35/cluster_5_node_35_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_64/merged_consensuses/node_2/cluster_64_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_34/cluster_5_node_34_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_36/cluster_5_node_36_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m179_MA2118.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m372_MA0047.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_14/cluster_6_node_14_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m427_MA0899.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m454_MA0913.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_15/cluster_6_node_15_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_14/cluster_6_node_14_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_14/cluster_6_node_14_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_15/cluster_6_node_15_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_15/cluster_6_node_15_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m398_MA0889.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m323_MA0644.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_37/cluster_5_node_37_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m588_MA0628.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m306_MA0612.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m307_MA0886.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_38/cluster_5_node_38_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_37/cluster_5_node_37_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_37/cluster_5_node_37_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_38/cluster_5_node_38_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_38/cluster_5_node_38_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_15/cluster_6_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224302_AQ0fXa


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_38/cluster_5_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224302_DFSRvo


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_14/cluster_6_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224302_0tQjpU


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_37/cluster_5_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224302_Uhfri8


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_15/cluster_6_node_15_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_37/cluster_5_node_37_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_14/cluster_6_node_14_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_38/cluster_5_node_38_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m760_MA1717.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m781_MA2520.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_65/merged_consensuses/node_1/cluster_65_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_65/merged_consensuses/node_1/cluster_65_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_65 -name cluster_65 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_65/merged_consensuses/node_1/cluster_65_node_1_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m382_MA0682.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m576_MA0714.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m564_MA0711.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m408_MA0648.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m409_MA0891.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_39/cluster_5_node_39_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_39/cluster_5_node_39_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_39/cluster_5_node_39_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_65/merged_consensuses/node_1/cluster_65_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224303_DXQq2M


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_39/cluster_5_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224303_I0DOyi


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_65/merged_consensuses/node_1/cluster_65_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_39/cluster_5_node_39_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m100_MA0032.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m99_MA0845.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_16/cluster_6_node_16_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_16/cluster_6_node_16_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_16/cluster_6_node_16_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m180_MA2119.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m500_MA0661.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m156_MA2093.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m501_MA0706.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_40/cluster_5_node_40_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_40/cluster_5_node_40_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_40/cluster_5_node_40_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_16/cluster_6_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224305_Gv8lKw


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_40/cluster_5_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224305_KdTg4s


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_16/cluster_6_node_16_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_40/cluster_5_node_40_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m158_MA2457.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m167_MA2458.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_66/merged_consensuses/node_1/cluster_66_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_66/merged_consensuses/node_1/cluster_66_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_66 -name cluster_66 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_66/merged_consensuses/node_1/cluster_66_node_1_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m478_MA0699.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m678_MA1577.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m462_MA0654.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m399_MA0890.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m308_MA0027.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m276_MA1481.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m270_MA0882.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m619_MA0630.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m269_MA0879.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m509_MA0666.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m510_MA0708.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_41/cluster_5_node_41_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_41/cluster_5_node_41_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_41/cluster_5_node_41_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_66/merged_consensuses/node_1/cluster_66_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224306_t7KL8w


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_41/cluster_5_nb_motifs_18.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224306_FdEh3U


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_66/merged_consensuses/node_1/cluster_66_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_41/cluster_5_node_41_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m432_MA0902.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m686_MA0723.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m540_MA0675.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m410_MA0892.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m434_MA0903.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m574_MA0132.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_42/cluster_5_node_42_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_42/cluster_5_node_42_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_42/cluster_5_node_42_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_42/cluster_5_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224307_nyg1Q5


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_42/cluster_5_node_42_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m441_MA0905.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m449_MA0908.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m440_MA1503.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m447_MA0485.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_17/cluster_6_node_17_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_17/cluster_6_node_17_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_17/cluster_6_node_17_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m430_MA1498.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m235_MA0875.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m246_MA0876.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_43/cluster_5_node_43_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_43/cluster_5_node_43_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_43/cluster_5_node_43_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_17/cluster_6_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224308_MjjmCO


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_43/cluster_5_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224308_63GSqU


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_17/cluster_6_node_17_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_43/cluster_5_node_43_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m205_MA2326.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m594_MA0508.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_67/merged_consensuses/node_1/cluster_67_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_67/merged_consensuses/node_1/cluster_67_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_67 -name cluster_67 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_67/merged_consensuses/node_1/cluster_67_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_67/merged_consensuses/node_1/cluster_67_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224309_BDKBVm


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_67/merged_consensuses/node_1/cluster_67_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m340_MA0900.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m588_MA0628.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m306_MA0612.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m307_MA0886.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_44/cluster_5_node_44_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_44/cluster_5_node_44_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_44/cluster_5_node_44_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_44/cluster_5_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224310_wMQ1iT


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_44/cluster_5_node_44_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m233_MA0877.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m234_MA0635.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_18/cluster_6_node_18_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m103_MA0850.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m33_MA0033.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_19/cluster_6_node_19_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_18/cluster_6_node_18_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_18/cluster_6_node_18_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_19/cluster_6_node_19_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_19/cluster_6_node_19_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m685_MA0722.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m688_MA0725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m689_MA0726.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_45/cluster_5_node_45_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_45/cluster_5_node_45_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_45/cluster_5_node_45_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_18/cluster_6_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224311_l99s4E


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_19/cluster_6_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224311_hwi1yC


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_45/cluster_5_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224311_7gJ5d1


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_18/cluster_6_node_18_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_19/cluster_6_node_19_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_45/cluster_5_node_45_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m248_MA1473.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m427_MA0899.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m454_MA0913.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_20/cluster_6_node_20_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m28_MA0613.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m34_MA0157.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_21/cluster_6_node_21_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m692_MA0749.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m699_MA0527.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_68/merged_consensuses/node_1/cluster_68_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_20/cluster_6_node_20_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_20/cluster_6_node_20_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_68/merged_consensuses/node_1/cluster_68_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_68 -name cluster_68 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_68/merged_consensuses/node_1/cluster_68_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_21/cluster_6_node_21_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_21/cluster_6_node_21_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_68/merged_consensuses/node_1/cluster_68_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224313_tmmROm


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_21/cluster_6_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224313_SE2nRz


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_20/cluster_6_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224313_tLWn7K


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_68/merged_consensuses/node_1/cluster_68_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_20/cluster_6_node_20_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_21/cluster_6_node_21_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m101_MA0848.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m102_MA0849.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m375_MA0031.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m384_MA1103.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m389_MA0481.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m206_MA2469.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m373_MA1683.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m32_MA0042.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m178_MA2117.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m383_MA0852.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m103_MA0850.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m33_MA0033.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_22/cluster_6_node_22_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_22/cluster_6_node_22_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_22/cluster_6_node_22_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m446_MA1505.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m295_MA1495.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m436_MA0904.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_46/cluster_5_node_46_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_46/cluster_5_node_46_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_46/cluster_5_node_46_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_46/cluster_5_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224314_XNRKhC


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_22/cluster_6_nb_motifs_12.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224314_qUIyVO


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_22/cluster_6_node_22_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_46/cluster_5_node_46_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m742_MA1728.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m843_MA2582.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_69/merged_consensuses/node_1/cluster_69_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_69/merged_consensuses/node_1/cluster_69_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_69 -name cluster_69 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_69/merged_consensuses/node_1/cluster_69_node_1_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m480_MA1519.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m398_MA0889.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m323_MA0644.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_47/cluster_5_node_47_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m429_MA1497.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m437_MA1500.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m439_MA1502.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m453_MA0910.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_48/cluster_5_node_48_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_47/cluster_5_node_47_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_47/cluster_5_node_47_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_48/cluster_5_node_48_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_48/cluster_5_node_48_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_69/merged_consensuses/node_1/cluster_69_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224316_HDUKUF


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_48/cluster_5_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224316_9rq7iO


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_47/cluster_5_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224316_mC80KP


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_69/merged_consensuses/node_1/cluster_69_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_47/cluster_5_node_47_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_48/cluster_5_node_48_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m151_MA0650.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m153_MA0909.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_23/cluster_6_node_23_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_23/cluster_6_node_23_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_23/cluster_6_node_23_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_23/cluster_6_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224317_2R2T5r


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_23/cluster_6_node_23_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m128_MA1489.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m28_MA0613.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m34_MA0157.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_24/cluster_6_node_24_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m374_MA0846.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m100_MA0032.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m99_MA0845.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_25/cluster_6_node_25_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_24/cluster_6_node_24_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_24/cluster_6_node_24_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_25/cluster_6_node_25_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_25/cluster_6_node_25_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m220_MA1463.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m481_MA0658.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_49/cluster_5_node_49_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_49/cluster_5_node_49_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_49/cluster_5_node_49_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_49/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224318_Z8UJ67


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_25/cluster_6_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224318_XSjIDk


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_24/cluster_6_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224318_l81MOG


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_49/cluster_5_node_49_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_24/cluster_6_node_24_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_25/cluster_6_node_25_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m316_MA0058.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m506_MA0825.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_1/cluster_7_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m513_MA0104.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m862_MA2601.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_2/cluster_7_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m194_MA0831.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m684_MA0526.5_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_3/cluster_7_node_3_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m379_MA0030.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m390_MA0593.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_26/cluster_6_node_26_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_1/cluster_7_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_1/cluster_7_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_2/cluster_7_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_2/cluster_7_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_3/cluster_7_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_3/cluster_7_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_26/cluster_6_node_26_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_26/cluster_6_node_26_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m507_MA0707.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m342_MA0887.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m343_MA0888.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_50/cluster_5_node_50_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_50/cluster_5_node_50_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_50/cluster_5_node_50_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_2/cluster_7_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224319_i0YcmM


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_26/cluster_6_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224319_QbvaAJ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_1/cluster_7_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224319_w8tf2F


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_50/cluster_5_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224319_jKZLTB


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_3/cluster_7_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224319_vjmdmT


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_2/cluster_7_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_50/cluster_5_node_50_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_26/cluster_6_node_26_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_3/cluster_7_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_1/cluster_7_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m371_MA0148.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m128_MA1489.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m28_MA0613.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m34_MA0157.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_27/cluster_6_node_27_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_27/cluster_6_node_27_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_27/cluster_6_node_27_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_27/cluster_6_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224320_p7OkvT


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_27/cluster_6_node_27_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m867_MA2674.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m876_MA2683.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_4/cluster_7_node_4_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m193_MA0821.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m95_MA0823.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_5/cluster_7_node_5_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_5/cluster_7_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_5/cluster_7_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_4/cluster_7_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_4/cluster_7_node_4_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m542_MA0710.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m685_MA0722.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m688_MA0725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m689_MA0726.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_51/cluster_5_node_51_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m340_MA0900.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m588_MA0628.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m306_MA0612.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m307_MA0886.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m446_MA1505.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m295_MA1495.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m436_MA0904.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_52/cluster_5_node_52_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_51/cluster_5_node_51_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_51/cluster_5_node_51_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_52/cluster_5_node_52_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_52/cluster_5_node_52_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_5/cluster_7_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224321_BMXOnW


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_4/cluster_7_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224321_WUjrDx


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_52/cluster_5_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224321_DH1Uj5


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_51/cluster_5_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224321_mpVoAQ


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_5/cluster_7_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_4/cluster_7_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_51/cluster_5_node_51_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_52/cluster_5_node_52_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m442_MA0651.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m450_MA0873.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m443_MA0906.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m448_MA1506.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_28/cluster_6_node_28_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m228_MA1466.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m257_MA0839.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_6/cluster_7_node_6_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m29_MA0636.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m194_MA0831.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m684_MA0526.5_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_7/cluster_7_node_7_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_28/cluster_6_node_28_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_28/cluster_6_node_28_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_6/cluster_7_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_6/cluster_7_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_7/cluster_7_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_7/cluster_7_node_7_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_6/cluster_7_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224322_Ih2NCg


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_7/cluster_7_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224322_gbY8yy


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_28/cluster_6_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224322_2HId7m


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_6/cluster_7_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_7/cluster_7_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_28/cluster_6_node_28_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m302_MA0828.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m40_MA0663.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_8/cluster_7_node_8_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m222_MA1464.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m671_MA0692.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_9/cluster_7_node_9_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_8/cluster_7_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_8/cluster_7_node_8_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_9/cluster_7_node_9_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_9/cluster_7_node_9_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m432_MA0902.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m686_MA0723.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m540_MA0675.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m410_MA0892.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m434_MA0903.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m574_MA0132.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m507_MA0707.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m342_MA0887.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m343_MA0888.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_53/cluster_5_node_53_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_53/cluster_5_node_53_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_53/cluster_5_node_53_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_9/cluster_7_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224323_e3jmyh


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_8/cluster_7_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224323_LBC6Ro


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_53/cluster_5_nb_motifs_9.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224323_9lHaMd


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_9/cluster_7_node_9_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_8/cluster_7_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_53/cluster_5_node_53_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m376_MA0847.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m378_MA1487.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_29/cluster_6_node_29_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_29/cluster_6_node_29_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_29/cluster_6_node_29_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m503_MA0620.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m29_MA0636.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m194_MA0831.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m684_MA0526.5_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_10/cluster_7_node_10_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_10/cluster_7_node_10_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_10/cluster_7_node_10_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_29/cluster_6_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224325_01Si7C


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_10/cluster_7_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224325_tWfquQ


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_29/cluster_6_node_29_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_10/cluster_7_node_10_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m444_MA0907.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m441_MA0905.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m449_MA0908.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m440_MA1503.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m447_MA0485.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_30/cluster_6_node_30_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m672_MA0871.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m222_MA1464.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m671_MA0692.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_11/cluster_7_node_11_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_30/cluster_6_node_30_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_30/cluster_6_node_30_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_11/cluster_7_node_11_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_11/cluster_7_node_11_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m435_MA1499.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m445_MA1504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m452_MA1507.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m432_MA0902.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m686_MA0723.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m540_MA0675.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m410_MA0892.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m434_MA0903.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m574_MA0132.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m507_MA0707.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m342_MA0887.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m343_MA0888.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_54/cluster_5_node_54_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_54/cluster_5_node_54_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_54/cluster_5_node_54_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_11/cluster_7_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224326_d5KqpN


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_54/cluster_5_nb_motifs_12.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224326_Hs0XWV


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_30/cluster_6_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224326_oTfOvY


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_54/cluster_5_node_54_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_11/cluster_7_node_11_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_30/cluster_6_node_30_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m195_MA0878.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m248_MA1473.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m427_MA0899.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m454_MA0913.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_31/cluster_6_node_31_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_31/cluster_6_node_31_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_31/cluster_6_node_31_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_31/cluster_6_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224327_YvF4rs


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_31/cluster_6_node_31_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m415_MA0616.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m417_MA0649.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_12/cluster_7_node_12_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_12/cluster_7_node_12_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_12/cluster_7_node_12_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m480_MA1519.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m398_MA0889.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m323_MA0644.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m542_MA0710.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m685_MA0722.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m688_MA0725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m689_MA0726.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_55/cluster_5_node_55_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_55/cluster_5_node_55_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_55/cluster_5_node_55_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_12/cluster_7_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224328_NOHIv3


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_55/cluster_5_nb_motifs_9.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224328_Lf1PAV


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_12/cluster_7_node_12_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_55/cluster_5_node_55_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m179_MA2118.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m372_MA0047.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m101_MA0848.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m102_MA0849.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m375_MA0031.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m384_MA1103.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m389_MA0481.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m206_MA2469.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m373_MA1683.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m32_MA0042.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m178_MA2117.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m383_MA0852.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m103_MA0850.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m33_MA0033.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_32/cluster_6_node_32_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_32/cluster_6_node_32_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_32/cluster_6_node_32_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_32/cluster_6_nb_motifs_14.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224329_CEnWM3


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_32/cluster_6_node_32_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m505_MA0664.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m672_MA0871.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m222_MA1464.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m671_MA0692.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_13/cluster_7_node_13_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_13/cluster_7_node_13_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_13/cluster_7_node_13_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m46_MA0068.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m220_MA1463.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m481_MA0658.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_56/cluster_5_node_56_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_56/cluster_5_node_56_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_56/cluster_5_node_56_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_13/cluster_7_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224330_j93Ypl


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_56/cluster_5_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224330_W4kae0


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_56/cluster_5_node_56_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_13/cluster_7_node_13_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m419_MA1106.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m867_MA2674.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m876_MA2683.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_14/cluster_7_node_14_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_14/cluster_7_node_14_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_14/cluster_7_node_14_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_14/cluster_7_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224331_toouCW


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_14/cluster_7_node_14_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m244_MA0464.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m626_MA1560.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_15/cluster_7_node_15_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m302_MA0828.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m40_MA0663.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m503_MA0620.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m29_MA0636.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m194_MA0831.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m684_MA0526.5_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_16/cluster_7_node_16_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_15/cluster_7_node_15_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_15/cluster_7_node_15_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_16/cluster_7_node_16_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_16/cluster_7_node_16_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_16/cluster_7_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224332_oJ1RSA


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_15/cluster_7_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224332_bXvzwq


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_16/cluster_7_node_16_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_15/cluster_7_node_15_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m379_MA0030.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m390_MA0593.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m371_MA0148.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m128_MA1489.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m28_MA0613.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m34_MA0157.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_33/cluster_6_node_33_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_33/cluster_6_node_33_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_33/cluster_6_node_33_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m479_MA0700.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m478_MA0699.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m678_MA1577.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m462_MA0654.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m399_MA0890.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m308_MA0027.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m276_MA1481.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m270_MA0882.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m619_MA0630.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m269_MA0879.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m509_MA0666.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m510_MA0708.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_57/cluster_5_node_57_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_57/cluster_5_node_57_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_57/cluster_5_node_57_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_33/cluster_6_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224333_EClWyS


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_57/cluster_5_nb_motifs_19.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224333_2oHm0u


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_33/cluster_6_node_33_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_57/cluster_5_node_57_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m492_MA0147.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m513_MA0104.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m862_MA2601.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_17/cluster_7_node_17_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m411_MA0893.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m428_MA1496.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_58/cluster_5_node_58_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_17/cluster_7_node_17_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_17/cluster_7_node_17_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_58/cluster_5_node_58_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_58/cluster_5_node_58_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_17/cluster_7_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224334_NEAa6K


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_58/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224334_wgG4Cy


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_58/cluster_5_node_58_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_17/cluster_7_node_17_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m414_MA1099.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m865_MA2628.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_18/cluster_7_node_18_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_18/cluster_7_node_18_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_18/cluster_7_node_18_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_18/cluster_7_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224335_nTPk6m


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_18/cluster_7_node_18_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m129_MA1493.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m193_MA0821.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m95_MA0823.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_19/cluster_7_node_19_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m483_MA0702.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m539_MA0674.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_59/cluster_5_node_59_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_19/cluster_7_node_19_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_19/cluster_7_node_19_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_59/cluster_5_node_59_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_59/cluster_5_node_59_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m340_MA0900.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m588_MA0628.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m306_MA0612.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m307_MA0886.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m446_MA1505.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m295_MA1495.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m436_MA0904.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m435_MA1499.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m445_MA1504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m452_MA1507.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m432_MA0902.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m686_MA0723.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m540_MA0675.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m410_MA0892.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m434_MA0903.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m574_MA0132.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m507_MA0707.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m342_MA0887.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m343_MA0888.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_60/cluster_5_node_60_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_60/cluster_5_node_60_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_60/cluster_5_node_60_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_19/cluster_7_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224336_RN8iDS


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_59/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224336_qAjSMC


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_60/cluster_5_nb_motifs_19.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224336_AGAKak


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_59/cluster_5_node_59_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_19/cluster_7_node_19_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_60/cluster_5_node_60_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m256_MA0638.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m690_MA0844.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_21/cluster_7_node_21_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m505_MA0664.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m672_MA0871.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m222_MA1464.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m671_MA0692.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m414_MA1099.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m865_MA2628.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_20/cluster_7_node_20_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m438_MA1501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m429_MA1497.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m437_MA1500.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m439_MA1502.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m453_MA0910.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_61/cluster_5_node_61_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_21/cluster_7_node_21_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_21/cluster_7_node_21_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_20/cluster_7_node_20_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_20/cluster_7_node_20_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_61/cluster_5_node_61_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_61/cluster_5_node_61_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_21/cluster_7_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224338_M8tJXU


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_61/cluster_5_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224338_Ch8ERu


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_20/cluster_7_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224338_Yc2Tya


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_61/cluster_5_node_61_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_20/cluster_7_node_20_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_21/cluster_7_node_21_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m442_MA0651.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m450_MA0873.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m443_MA0906.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m448_MA1506.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m444_MA0907.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m441_MA0905.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m449_MA0908.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m440_MA1503.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m447_MA0485.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_34/cluster_6_node_34_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_34/cluster_6_node_34_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_34/cluster_6_node_34_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_34/cluster_6_nb_motifs_9.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224339_t19aoo


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_34/cluster_6_node_34_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m415_MA0616.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m417_MA0649.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m129_MA1493.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m193_MA0821.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m95_MA0823.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_23/cluster_7_node_23_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m641_MA0829.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m302_MA0828.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m40_MA0663.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m503_MA0620.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m29_MA0636.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m194_MA0831.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m684_MA0526.5_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_22/cluster_7_node_22_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_23/cluster_7_node_23_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_23/cluster_7_node_23_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_22/cluster_7_node_22_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_22/cluster_7_node_22_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_23/cluster_7_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224340_ow0fVU


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_22/cluster_7_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224340_Mm5dTP


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_23/cluster_7_node_23_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_22/cluster_7_node_22_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m126_MA1476.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m131_MA1518.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_62/cluster_5_node_62_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_62/cluster_5_node_62_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_62/cluster_5_node_62_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_62/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224341_f1nG9s


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_62/cluster_5_node_62_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m683_MA0093.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m641_MA0829.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m302_MA0828.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m40_MA0663.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m503_MA0620.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m29_MA0636.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m194_MA0831.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m684_MA0526.5_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_24/cluster_7_node_24_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_24/cluster_7_node_24_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_24/cluster_7_node_24_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_24/cluster_7_nb_motifs_8.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224343_ZJ9yzk


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_24/cluster_7_node_24_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m266_MA0901.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m195_MA0878.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m248_MA1473.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m427_MA0899.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m454_MA0913.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_35/cluster_6_node_35_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_35/cluster_6_node_35_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_35/cluster_6_node_35_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m430_MA1498.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m235_MA0875.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m246_MA0876.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m479_MA0700.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m478_MA0699.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m678_MA1577.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m462_MA0654.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m399_MA0890.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m308_MA0027.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m276_MA1481.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m270_MA0882.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m619_MA0630.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m269_MA0879.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m509_MA0666.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m510_MA0708.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_63/cluster_5_node_63_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_63/cluster_5_node_63_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_63/cluster_5_node_63_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_35/cluster_6_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224344_tH3enH


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_63/cluster_5_nb_motifs_22.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224345_mz8Noi


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_35/cluster_6_node_35_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_63/cluster_5_node_63_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m228_MA1466.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m257_MA0839.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m256_MA0638.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m690_MA0844.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_25/cluster_7_node_25_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_25/cluster_7_node_25_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_25/cluster_7_node_25_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_25/cluster_7_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224345_SB9vAn


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_25/cluster_7_node_25_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m477_MA0618.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m480_MA1519.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m398_MA0889.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m323_MA0644.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m542_MA0710.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m685_MA0722.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m688_MA0725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m689_MA0726.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_64/cluster_5_node_64_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_64/cluster_5_node_64_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_64/cluster_5_node_64_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_64/cluster_5_nb_motifs_10.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224346_HEwHMv


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_64/cluster_5_node_64_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m254_MA0819.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m316_MA0058.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m506_MA0825.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_26/cluster_7_node_26_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_26/cluster_7_node_26_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_26/cluster_7_node_26_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_26/cluster_7_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224347_iAL1OV


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_26/cluster_7_node_26_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m244_MA0464.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m626_MA1560.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m492_MA0147.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m513_MA0104.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m862_MA2601.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_27/cluster_7_node_27_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_27/cluster_7_node_27_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_27/cluster_7_node_27_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_27/cluster_7_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224349_V2mGfC


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_27/cluster_7_node_27_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m221_MA0259.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m419_MA1106.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m867_MA2674.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m876_MA2683.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_28/cluster_7_node_28_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_28/cluster_7_node_28_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_28/cluster_7_node_28_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_28/cluster_7_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224350_sLOYVx


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_28/cluster_7_node_28_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m258_MA1474.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m228_MA1466.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m257_MA0839.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m256_MA0638.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m690_MA0844.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_29/cluster_7_node_29_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_29/cluster_7_node_29_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_29/cluster_7_node_29_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_29/cluster_7_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224350_mVFewZ


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_29/cluster_7_node_29_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m152_MA0158.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m154_MA0912.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_65/cluster_5_node_65_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_65/cluster_5_node_65_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_65/cluster_5_node_65_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m491_MA0059.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m415_MA0616.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m417_MA0649.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m129_MA1493.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m193_MA0821.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m95_MA0823.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_30/cluster_7_node_30_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_30/cluster_7_node_30_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_30/cluster_7_node_30_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_65/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224351_SkudVW


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_30/cluster_7_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224352_cSZLkZ


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_65/cluster_5_node_65_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_30/cluster_7_node_30_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m179_MA2118.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m372_MA0047.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m101_MA0848.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m102_MA0849.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m375_MA0031.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m384_MA1103.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m389_MA0481.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m206_MA2469.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m373_MA1683.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m32_MA0042.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m178_MA2117.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m383_MA0852.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m103_MA0850.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m33_MA0033.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m379_MA0030.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m390_MA0593.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m371_MA0148.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m128_MA1489.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m28_MA0613.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m34_MA0157.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_36/cluster_6_node_36_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_36/cluster_6_node_36_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_36/cluster_6_node_36_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m254_MA0819.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m316_MA0058.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m506_MA0825.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m244_MA0464.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m626_MA1560.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m492_MA0147.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m513_MA0104.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m862_MA2601.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_31/cluster_7_node_31_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_31/cluster_7_node_31_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_31/cluster_7_node_31_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_36/cluster_6_nb_motifs_20.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224352_8VJg8i


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_31/cluster_7_nb_motifs_8.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224353_adbdf0


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_36/cluster_6_node_36_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_31/cluster_7_node_31_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m309_MA0642.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m477_MA0618.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m480_MA1519.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m398_MA0889.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m323_MA0644.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m542_MA0710.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m685_MA0722.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m688_MA0725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m689_MA0726.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_66/cluster_5_node_66_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_66/cluster_5_node_66_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_66/cluster_5_node_66_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_66/cluster_5_nb_motifs_11.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224354_pZwIxw


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_66/cluster_5_node_66_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m247_MA0465.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m266_MA0901.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m195_MA0878.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m248_MA1473.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m427_MA0899.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m454_MA0913.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_37/cluster_6_node_37_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_37/cluster_6_node_37_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_37/cluster_6_node_37_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m411_MA0893.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m428_MA1496.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m438_MA1501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m429_MA1497.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m437_MA1500.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m439_MA1502.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m453_MA0910.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_67/cluster_5_node_67_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_67/cluster_5_node_67_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_67/cluster_5_node_67_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m802_MA2541.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m94_MA0822.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_33/cluster_7_node_33_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_33/cluster_7_node_33_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_33/cluster_7_node_33_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m505_MA0664.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m672_MA0871.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m222_MA1464.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m671_MA0692.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m414_MA1099.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m865_MA2628.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m491_MA0059.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m415_MA0616.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m417_MA0649.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m129_MA1493.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m193_MA0821.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m95_MA0823.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_32/cluster_7_node_32_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_32/cluster_7_node_32_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_32/cluster_7_node_32_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_37/cluster_6_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224354_w8ZD4F


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_67/cluster_5_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224355_LdMYLB


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_32/cluster_7_nb_motifs_12.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224355_RNopX4


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_33/cluster_7_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224355_xT7712


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_37/cluster_6_node_37_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_67/cluster_5_node_67_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_32/cluster_7_node_32_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_33/cluster_7_node_33_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m151_MA0650.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m153_MA0909.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m247_MA0465.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m266_MA0901.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m195_MA0878.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m248_MA1473.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m427_MA0899.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m454_MA0913.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_38/cluster_6_node_38_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_38/cluster_6_node_38_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_38/cluster_6_node_38_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m683_MA0093.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m641_MA0829.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m302_MA0828.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m40_MA0663.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m503_MA0620.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m29_MA0636.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m194_MA0831.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m684_MA0526.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m505_MA0664.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m672_MA0871.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m222_MA1464.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m671_MA0692.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m414_MA1099.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m865_MA2628.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m491_MA0059.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m415_MA0616.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m417_MA0649.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m129_MA1493.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m193_MA0821.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m95_MA0823.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_34/cluster_7_node_34_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_34/cluster_7_node_34_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_34/cluster_7_node_34_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_38/cluster_6_nb_motifs_8.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224355_aJLttX


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_34/cluster_7_nb_motifs_20.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224356_UKVb2g


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_38/cluster_6_node_38_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_34/cluster_7_node_34_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m221_MA0259.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m419_MA1106.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m867_MA2674.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m876_MA2683.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m254_MA0819.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m316_MA0058.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m506_MA0825.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m244_MA0464.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m626_MA1560.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m492_MA0147.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m513_MA0104.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m862_MA2601.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_35/cluster_7_node_35_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_35/cluster_7_node_35_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_35/cluster_7_node_35_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_35/cluster_7_nb_motifs_12.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224357_Bh1n7f


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_35/cluster_7_node_35_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m340_MA0900.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m588_MA0628.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m306_MA0612.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m307_MA0886.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m446_MA1505.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m295_MA1495.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m436_MA0904.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m435_MA1499.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m445_MA1504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m452_MA1507.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m432_MA0902.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m686_MA0723.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m540_MA0675.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m410_MA0892.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m434_MA0903.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m574_MA0132.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m507_MA0707.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m342_MA0887.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m343_MA0888.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m430_MA1498.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m235_MA0875.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m246_MA0876.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m479_MA0700.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m478_MA0699.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m678_MA1577.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m462_MA0654.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m399_MA0890.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m308_MA0027.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m276_MA1481.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m270_MA0882.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m619_MA0630.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m269_MA0879.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m509_MA0666.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m510_MA0708.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_68/cluster_5_node_68_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_68/cluster_5_node_68_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_68/cluster_5_node_68_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_68/cluster_5_nb_motifs_41.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224358_U0dI0V


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_68/cluster_5_node_68_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m180_MA2119.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m500_MA0661.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m156_MA2093.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m501_MA0706.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m309_MA0642.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m477_MA0618.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m480_MA1519.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m398_MA0889.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m323_MA0644.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m542_MA0710.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m685_MA0722.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m688_MA0725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m689_MA0726.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_69/cluster_5_node_69_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_69/cluster_5_node_69_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_69/cluster_5_node_69_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_69/cluster_5_nb_motifs_15.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224359_6WbeFD


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_69/cluster_5_node_69_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m656_MA0632.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m221_MA0259.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m419_MA1106.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m867_MA2674.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m876_MA2683.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m254_MA0819.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m316_MA0058.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m506_MA0825.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m244_MA0464.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m626_MA1560.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m492_MA0147.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m513_MA0104.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m862_MA2601.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_36/cluster_7_node_36_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_36/cluster_7_node_36_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_36/cluster_7_node_36_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_36/cluster_7_nb_motifs_13.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224401_3d80Hj


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_36/cluster_7_node_36_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m484_MA0703.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m46_MA0068.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m220_MA1463.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m481_MA0658.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_70/cluster_5_node_70_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_70/cluster_5_node_70_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_70/cluster_5_node_70_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_70/cluster_5_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224402_heUkON


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_70/cluster_5_node_70_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m683_MA0093.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m641_MA0829.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m302_MA0828.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m40_MA0663.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m503_MA0620.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m29_MA0636.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m194_MA0831.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m684_MA0526.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m505_MA0664.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m672_MA0871.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m222_MA1464.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m671_MA0692.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m414_MA1099.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m865_MA2628.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m491_MA0059.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m415_MA0616.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m417_MA0649.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m129_MA1493.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m193_MA0821.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m95_MA0823.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m656_MA0632.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m221_MA0259.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m419_MA1106.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m867_MA2674.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m876_MA2683.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m254_MA0819.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m316_MA0058.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m506_MA0825.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m244_MA0464.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m626_MA1560.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m492_MA0147.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m513_MA0104.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m862_MA2601.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_37/cluster_7_node_37_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_37/cluster_7_node_37_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_37/cluster_7_node_37_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_37/cluster_7_nb_motifs_33.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224403_CfIHPq


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_37/cluster_7_node_37_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m126_MA1476.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m131_MA1518.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m152_MA0158.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m154_MA0912.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_71/cluster_5_node_71_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_71/cluster_5_node_71_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_71/cluster_5_node_71_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_71/cluster_5_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224405_goHCBp


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_71/cluster_5_node_71_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m374_MA0846.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m100_MA0032.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m99_MA0845.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m376_MA0847.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m378_MA1487.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_39/cluster_6_node_39_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_39/cluster_6_node_39_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_39/cluster_6_node_39_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_39/cluster_6_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224407_jgBBDj


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_39/cluster_6_node_39_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m377_MA0041.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m374_MA0846.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m100_MA0032.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m99_MA0845.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m376_MA0847.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m378_MA1487.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_40/cluster_6_node_40_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_40/cluster_6_node_40_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_40/cluster_6_node_40_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m610_MA0719.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m382_MA0682.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m576_MA0714.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m564_MA0711.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m408_MA0648.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m409_MA0891.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_72/cluster_5_node_72_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_72/cluster_5_node_72_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_72/cluster_5_node_72_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_40/cluster_6_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224408_63WJek


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_72/cluster_5_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224408_8vYPyQ


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_40/cluster_6_node_40_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_72/cluster_5_node_72_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m483_MA0702.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m539_MA0674.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m180_MA2119.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m500_MA0661.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m156_MA2093.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m501_MA0706.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m309_MA0642.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m477_MA0618.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m480_MA1519.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m398_MA0889.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m323_MA0644.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m542_MA0710.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m685_MA0722.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m688_MA0725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m689_MA0726.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_73/cluster_5_node_73_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_73/cluster_5_node_73_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_73/cluster_5_node_73_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m204_MA2325.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m683_MA0093.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m641_MA0829.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m302_MA0828.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m40_MA0663.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m503_MA0620.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m29_MA0636.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m194_MA0831.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m684_MA0526.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m505_MA0664.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m672_MA0871.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m222_MA1464.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m671_MA0692.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m414_MA1099.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m865_MA2628.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m491_MA0059.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m415_MA0616.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m417_MA0649.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m129_MA1493.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m193_MA0821.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m95_MA0823.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m656_MA0632.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m221_MA0259.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m419_MA1106.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m867_MA2674.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m876_MA2683.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m254_MA0819.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m316_MA0058.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m506_MA0825.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m244_MA0464.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m626_MA1560.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m492_MA0147.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m513_MA0104.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m862_MA2601.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_38/cluster_7_node_38_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_38/cluster_7_node_38_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_38/cluster_7_node_38_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_38/cluster_7_nb_motifs_34.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224409_w5Db1x


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_73/cluster_5_nb_motifs_17.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224409_IgvbNI


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_73/cluster_5_node_73_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_38/cluster_7_node_38_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m233_MA0877.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m234_MA0635.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m179_MA2118.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m372_MA0047.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m101_MA0848.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m102_MA0849.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m375_MA0031.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m384_MA1103.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m389_MA0481.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m206_MA2469.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m373_MA1683.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m32_MA0042.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m178_MA2117.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m383_MA0852.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m103_MA0850.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m33_MA0033.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m379_MA0030.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m390_MA0593.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m371_MA0148.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m128_MA1489.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m28_MA0613.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m34_MA0157.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_41/cluster_6_node_41_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_41/cluster_6_node_41_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_41/cluster_6_node_41_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_41/cluster_6_nb_motifs_22.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224412_VRCIMA


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_41/cluster_6_node_41_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m442_MA0651.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m450_MA0873.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m443_MA0906.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m448_MA1506.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m444_MA0907.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m441_MA0905.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m449_MA0908.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m440_MA1503.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m447_MA0485.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m151_MA0650.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m153_MA0909.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m247_MA0465.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m266_MA0901.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m195_MA0878.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m248_MA1473.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m427_MA0899.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m454_MA0913.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_42/cluster_6_node_42_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_42/cluster_6_node_42_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_42/cluster_6_node_42_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m530_MA0060.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m532_MA1644.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_74/cluster_5_node_74_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_74/cluster_5_node_74_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_74/cluster_5_node_74_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_74/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224413_WmqkLY


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_42/cluster_6_nb_motifs_17.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224413_gtpmGl


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_74/cluster_5_node_74_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_42/cluster_6_node_42_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m258_MA1474.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m228_MA1466.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m257_MA0839.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m256_MA0638.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m690_MA0844.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m802_MA2541.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m94_MA0822.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_39/cluster_7_node_39_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_39/cluster_7_node_39_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_39/cluster_7_node_39_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_39/cluster_7_nb_motifs_7.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224414_3TkiUU


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_39/cluster_7_node_39_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m199_MA1547.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m565_MA0712.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_75/cluster_5_node_75_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_75/cluster_5_node_75_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_75/cluster_5_node_75_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_75/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224415_ANiTYV


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_75/cluster_5_node_75_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m204_MA2325.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m683_MA0093.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m641_MA0829.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m302_MA0828.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m40_MA0663.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m503_MA0620.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m29_MA0636.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m194_MA0831.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m684_MA0526.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m505_MA0664.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m672_MA0871.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m222_MA1464.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m671_MA0692.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m414_MA1099.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m865_MA2628.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m491_MA0059.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m415_MA0616.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m417_MA0649.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m129_MA1493.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m193_MA0821.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m95_MA0823.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m656_MA0632.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m221_MA0259.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m419_MA1106.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m867_MA2674.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m876_MA2683.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m254_MA0819.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m316_MA0058.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m506_MA0825.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m244_MA0464.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m626_MA1560.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m492_MA0147.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m513_MA0104.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m862_MA2601.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m258_MA1474.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m228_MA1466.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m257_MA0839.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m256_MA0638.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m690_MA0844.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m802_MA2541.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m94_MA0822.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_40/cluster_7_node_40_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_40/cluster_7_node_40_cat.tf -v 0 -in_format tf -out_format tf -id cluster_7 -name cluster_7 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_40/cluster_7_node_40_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_40/cluster_7_nb_motifs_41.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224417_Aa9fkh


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_7/merged_consensuses/node_40/cluster_7_node_40_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m411_MA0893.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m428_MA1496.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m438_MA1501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m429_MA1497.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m437_MA1500.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m439_MA1502.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m453_MA0910.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m483_MA0702.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m539_MA0674.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m180_MA2119.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m500_MA0661.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m156_MA2093.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m501_MA0706.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m309_MA0642.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m477_MA0618.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m480_MA1519.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m398_MA0889.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m323_MA0644.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m542_MA0710.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m685_MA0722.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m688_MA0725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m689_MA0726.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_76/cluster_5_node_76_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_76/cluster_5_node_76_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_76/cluster_5_node_76_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_76/cluster_5_nb_motifs_24.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224419_dTIOC8


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_76/cluster_5_node_76_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m484_MA0703.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m46_MA0068.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m220_MA1463.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m481_MA0658.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m126_MA1476.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m131_MA1518.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m152_MA0158.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m154_MA0912.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_77/cluster_5_node_77_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_77/cluster_5_node_77_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_77/cluster_5_node_77_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_77/cluster_5_nb_motifs_8.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224422_huSnQ0


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_77/cluster_5_node_77_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m870_MA2677.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m484_MA0703.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m46_MA0068.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m220_MA1463.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m481_MA0658.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m126_MA1476.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m131_MA1518.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m152_MA0158.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m154_MA0912.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_78/cluster_5_node_78_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_78/cluster_5_node_78_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_78/cluster_5_node_78_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_78/cluster_5_nb_motifs_9.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224424_LBe4cO


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_78/cluster_5_node_78_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m541_MA1530.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m589_MA1549.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_79/cluster_5_node_79_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_79/cluster_5_node_79_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_79/cluster_5_node_79_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_79/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224427_7AgpM1


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_79/cluster_5_node_79_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m377_MA0041.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m374_MA0846.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m100_MA0032.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m99_MA0845.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m376_MA0847.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m378_MA1487.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m233_MA0877.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m234_MA0635.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m179_MA2118.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m372_MA0047.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m101_MA0848.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m102_MA0849.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m375_MA0031.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m384_MA1103.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m389_MA0481.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m206_MA2469.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m373_MA1683.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m32_MA0042.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m178_MA2117.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m383_MA0852.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m103_MA0850.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m33_MA0033.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m379_MA0030.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m390_MA0593.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m371_MA0148.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m128_MA1489.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m28_MA0613.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m34_MA0157.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_43/cluster_6_node_43_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_43/cluster_6_node_43_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_43/cluster_6_node_43_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_43/cluster_6_nb_motifs_28.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224428_c1fiUh


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_43/cluster_6_node_43_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m858_MA2597.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m199_MA1547.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m565_MA0712.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_80/cluster_5_node_80_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_80/cluster_5_node_80_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_80/cluster_5_node_80_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m340_MA0900.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m588_MA0628.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m306_MA0612.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m307_MA0886.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m446_MA1505.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m295_MA1495.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m436_MA0904.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m435_MA1499.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m445_MA1504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m452_MA1507.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m432_MA0902.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m686_MA0723.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m540_MA0675.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m410_MA0892.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m434_MA0903.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m574_MA0132.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m507_MA0707.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m342_MA0887.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m343_MA0888.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m430_MA1498.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m235_MA0875.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m246_MA0876.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m479_MA0700.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m478_MA0699.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m678_MA1577.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m462_MA0654.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m399_MA0890.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m308_MA0027.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m276_MA1481.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m270_MA0882.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m619_MA0630.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m269_MA0879.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m509_MA0666.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m510_MA0708.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m411_MA0893.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m428_MA1496.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m438_MA1501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m429_MA1497.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m437_MA1500.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m439_MA1502.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m453_MA0910.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m483_MA0702.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m539_MA0674.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m180_MA2119.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m500_MA0661.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m156_MA2093.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m501_MA0706.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m309_MA0642.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m477_MA0618.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m480_MA1519.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m398_MA0889.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m323_MA0644.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m542_MA0710.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m685_MA0722.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m688_MA0725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m689_MA0726.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_81/cluster_5_node_81_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_81/cluster_5_node_81_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_81/cluster_5_node_81_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_80/cluster_5_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224429_1zzXL2


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_81/cluster_5_nb_motifs_65.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224429_B2rIka


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_80/cluster_5_node_80_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_81/cluster_5_node_81_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m610_MA0719.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m382_MA0682.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m576_MA0714.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m564_MA0711.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m408_MA0648.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m409_MA0891.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m858_MA2597.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m199_MA1547.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m565_MA0712.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_82/cluster_5_node_82_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_82/cluster_5_node_82_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_82/cluster_5_node_82_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_82/cluster_5_nb_motifs_9.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224431_CS6lsA


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_82/cluster_5_node_82_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m442_MA0651.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m450_MA0873.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m443_MA0906.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m448_MA1506.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m444_MA0907.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m441_MA0905.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m449_MA0908.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m440_MA1503.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m447_MA0485.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m151_MA0650.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m153_MA0909.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m247_MA0465.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m266_MA0901.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m195_MA0878.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m248_MA1473.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m427_MA0899.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m454_MA0913.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m377_MA0041.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m374_MA0846.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m100_MA0032.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m99_MA0845.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m376_MA0847.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m378_MA1487.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m233_MA0877.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m234_MA0635.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m179_MA2118.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m372_MA0047.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m101_MA0848.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m102_MA0849.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m375_MA0031.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m384_MA1103.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m389_MA0481.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m206_MA2469.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m373_MA1683.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m32_MA0042.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m178_MA2117.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m383_MA0852.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m103_MA0850.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m33_MA0033.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m379_MA0030.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m390_MA0593.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m371_MA0148.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m128_MA1489.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m28_MA0613.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m34_MA0157.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_44/cluster_6_node_44_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_44/cluster_6_node_44_cat.tf -v 0 -in_format tf -out_format tf -id cluster_6 -name cluster_6 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_44/cluster_6_node_44_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m870_MA2677.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m484_MA0703.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m46_MA0068.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m220_MA1463.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m481_MA0658.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m126_MA1476.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m131_MA1518.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m152_MA0158.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m154_MA0912.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m340_MA0900.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m588_MA0628.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m306_MA0612.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m307_MA0886.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m446_MA1505.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m295_MA1495.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m436_MA0904.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m435_MA1499.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m445_MA1504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m452_MA1507.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m432_MA0902.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m686_MA0723.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m540_MA0675.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m410_MA0892.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m434_MA0903.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m574_MA0132.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m507_MA0707.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m342_MA0887.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m343_MA0888.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m430_MA1498.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m235_MA0875.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m246_MA0876.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m479_MA0700.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m478_MA0699.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m678_MA1577.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m462_MA0654.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m399_MA0890.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m308_MA0027.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m276_MA1481.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m270_MA0882.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m619_MA0630.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m269_MA0879.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m509_MA0666.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m510_MA0708.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m411_MA0893.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m428_MA1496.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m438_MA1501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m429_MA1497.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m437_MA1500.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m439_MA1502.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m453_MA0910.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m483_MA0702.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m539_MA0674.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m180_MA2119.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m500_MA0661.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m156_MA2093.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m501_MA0706.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m309_MA0642.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m477_MA0618.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m480_MA1519.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m398_MA0889.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m323_MA0644.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m542_MA0710.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m685_MA0722.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m688_MA0725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m689_MA0726.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_83/cluster_5_node_83_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_83/cluster_5_node_83_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_83/cluster_5_node_83_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_44/cluster_6_nb_motifs_45.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224436_adavmt


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_83/cluster_5_nb_motifs_74.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224436_leD5Dn


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_6/merged_consensuses/node_44/cluster_6_node_44_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_83/cluster_5_node_83_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m461_MA0914.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m870_MA2677.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m484_MA0703.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m46_MA0068.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m220_MA1463.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m481_MA0658.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m126_MA1476.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m131_MA1518.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m152_MA0158.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m154_MA0912.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m340_MA0900.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m588_MA0628.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m306_MA0612.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m307_MA0886.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m446_MA1505.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m295_MA1495.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m436_MA0904.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m435_MA1499.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m445_MA1504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m452_MA1507.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m432_MA0902.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m686_MA0723.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m540_MA0675.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m410_MA0892.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m434_MA0903.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m574_MA0132.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m507_MA0707.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m342_MA0887.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m343_MA0888.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m430_MA1498.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m235_MA0875.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m246_MA0876.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m479_MA0700.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m478_MA0699.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m678_MA1577.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m462_MA0654.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m399_MA0890.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m308_MA0027.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m276_MA1481.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m270_MA0882.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m619_MA0630.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m269_MA0879.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m509_MA0666.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m510_MA0708.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m411_MA0893.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m428_MA1496.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m438_MA1501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m429_MA1497.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m437_MA1500.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m439_MA1502.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m453_MA0910.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m483_MA0702.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m539_MA0674.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m180_MA2119.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m500_MA0661.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m156_MA2093.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m501_MA0706.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m309_MA0642.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m477_MA0618.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m480_MA1519.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m398_MA0889.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m323_MA0644.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m542_MA0710.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m685_MA0722.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m688_MA0725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m689_MA0726.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_84/cluster_5_node_84_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_84/cluster_5_node_84_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_84/cluster_5_node_84_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_84/cluster_5_nb_motifs_75.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224441_GWzfLL


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_84/cluster_5_node_84_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m713_MA1652.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m773_MA2512.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_70/merged_consensuses/node_1/cluster_70_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_70/merged_consensuses/node_1/cluster_70_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_70 -name cluster_70 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_70/merged_consensuses/node_1/cluster_70_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_70/merged_consensuses/node_1/cluster_70_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224443_w9f1wj


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_70/merged_consensuses/node_1/cluster_70_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m721_MA1710.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m713_MA1652.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m773_MA2512.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_70/merged_consensuses/node_2/cluster_70_node_2_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_70/merged_consensuses/node_2/cluster_70_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_70 -name cluster_70 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_70/merged_consensuses/node_2/cluster_70_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_70/merged_consensuses/node_2/cluster_70_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224444_oeH7Gn


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_70/merged_consensuses/node_2/cluster_70_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m833_MA2572.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m836_MA2575.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_71/merged_consensuses/node_1/cluster_71_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_71/merged_consensuses/node_1/cluster_71_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_71 -name cluster_71 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_71/merged_consensuses/node_1/cluster_71_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_71/merged_consensuses/node_1/cluster_71_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224447_Rn6ZSz


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_71/merged_consensuses/node_1/cluster_71_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m707_MA1583.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m736_MA1727.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_72/merged_consensuses/node_1/cluster_72_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_72/merged_consensuses/node_1/cluster_72_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_72 -name cluster_72 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_72/merged_consensuses/node_1/cluster_72_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_72/merged_consensuses/node_1/cluster_72_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224449_BXUAXO


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_72/merged_consensuses/node_1/cluster_72_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m832_MA2571.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m707_MA1583.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m736_MA1727.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_72/merged_consensuses/node_2/cluster_72_node_2_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_72/merged_consensuses/node_2/cluster_72_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_72 -name cluster_72 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_72/merged_consensuses/node_2/cluster_72_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_72/merged_consensuses/node_2/cluster_72_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224451_El9tUQ


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_72/merged_consensuses/node_2/cluster_72_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m10_MA0124.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m798_MA2537.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_73/merged_consensuses/node_1/cluster_73_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_73/merged_consensuses/node_1/cluster_73_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_73 -name cluster_73 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_73/merged_consensuses/node_1/cluster_73_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_73/merged_consensuses/node_1/cluster_73_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224454_7khJBc


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_73/merged_consensuses/node_1/cluster_73_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m714_MA2491.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m790_MA2529.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_74/merged_consensuses/node_1/cluster_74_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_74/merged_consensuses/node_1/cluster_74_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_74 -name cluster_74 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_74/merged_consensuses/node_1/cluster_74_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_74/merged_consensuses/node_1/cluster_74_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224456_nviTBr


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_74/merged_consensuses/node_1/cluster_74_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m181_MA2120.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m783_MA2522.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_75/merged_consensuses/node_1/cluster_75_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m741_MA1981.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m881_MA2688.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_75/merged_consensuses/node_2/cluster_75_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m181_MA2120.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m783_MA2522.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m741_MA1981.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m881_MA2688.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_75/merged_consensuses/node_3/cluster_75_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_75/merged_consensuses/node_2/cluster_75_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_75 -name cluster_75 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_75/merged_consensuses/node_2/cluster_75_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_75/merged_consensuses/node_1/cluster_75_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_75 -name cluster_75 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_75/merged_consensuses/node_1/cluster_75_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_75/merged_consensuses/node_3/cluster_75_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_75 -name cluster_75 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_75/merged_consensuses/node_3/cluster_75_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_75/merged_consensuses/node_1/cluster_75_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224458_C2KNDN


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_75/merged_consensuses/node_2/cluster_75_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224458_DwVJ5b


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_75/merged_consensuses/node_3/cluster_75_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224458_ScNrLE


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_75/merged_consensuses/node_2/cluster_75_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_75/merged_consensuses/node_1/cluster_75_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_75/merged_consensuses/node_3/cluster_75_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m143_MA1573.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m890_MA0088.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_76/merged_consensuses/node_1/cluster_76_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_76/merged_consensuses/node_1/cluster_76_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_76 -name cluster_76 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_76/merged_consensuses/node_1/cluster_76_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_76/merged_consensuses/node_1/cluster_76_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224501_Xskzbr


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_76/merged_consensuses/node_1/cluster_76_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m758_MA1716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m143_MA1573.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m890_MA0088.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_76/merged_consensuses/node_2/cluster_76_node_2_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_76/merged_consensuses/node_2/cluster_76_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_76 -name cluster_76 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_76/merged_consensuses/node_2/cluster_76_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_76/merged_consensuses/node_2/cluster_76_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224503_8TKcJq


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_76/merged_consensuses/node_2/cluster_76_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m590_MA0793.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m541_MA1530.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m589_MA1549.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_85/cluster_5_node_85_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_85/cluster_5_node_85_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_85/cluster_5_node_85_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_85/cluster_5_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224505_TyPux8


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_85/cluster_5_node_85_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m175_MA1972.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m848_MA2587.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_77/merged_consensuses/node_1/cluster_77_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_77/merged_consensuses/node_1/cluster_77_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_77 -name cluster_77 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_77/merged_consensuses/node_1/cluster_77_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_77/merged_consensuses/node_1/cluster_77_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224506_pKnr8j


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_77/merged_consensuses/node_1/cluster_77_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m813_MA2552.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m878_MA2685.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_86/cluster_5_node_86_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_86/cluster_5_node_86_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_86/cluster_5_node_86_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_86/cluster_5_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224507_pwYdki


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_86/cluster_5_node_86_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m788_MA2527.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m825_MA2564.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_78/merged_consensuses/node_1/cluster_78_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_78/merged_consensuses/node_1/cluster_78_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_78 -name cluster_78 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_78/merged_consensuses/node_1/cluster_78_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_78/merged_consensuses/node_1/cluster_78_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224508_QHwnF3


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_78/merged_consensuses/node_1/cluster_78_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m762_MA1720.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m788_MA2527.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m825_MA2564.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_78/merged_consensuses/node_2/cluster_78_node_2_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_78/merged_consensuses/node_2/cluster_78_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_78 -name cluster_78 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_78/merged_consensuses/node_2/cluster_78_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_78/merged_consensuses/node_2/cluster_78_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224509_G6Z4ts


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_78/merged_consensuses/node_2/cluster_78_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m461_MA0914.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m870_MA2677.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m484_MA0703.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m46_MA0068.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m220_MA1463.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m481_MA0658.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m126_MA1476.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m131_MA1518.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m152_MA0158.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m154_MA0912.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m340_MA0900.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m588_MA0628.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m306_MA0612.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m307_MA0886.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m446_MA1505.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m295_MA1495.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m436_MA0904.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m435_MA1499.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m445_MA1504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m452_MA1507.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m432_MA0902.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m686_MA0723.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m540_MA0675.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m410_MA0892.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m434_MA0903.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m574_MA0132.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m507_MA0707.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m342_MA0887.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m343_MA0888.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m430_MA1498.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m235_MA0875.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m246_MA0876.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m479_MA0700.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m478_MA0699.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m678_MA1577.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m462_MA0654.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m399_MA0890.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m308_MA0027.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m276_MA1481.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m270_MA0882.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m619_MA0630.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m269_MA0879.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m509_MA0666.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m510_MA0708.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m411_MA0893.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m428_MA1496.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m438_MA1501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m429_MA1497.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m437_MA1500.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m439_MA1502.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m453_MA0910.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m483_MA0702.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m539_MA0674.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m180_MA2119.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m500_MA0661.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m156_MA2093.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m501_MA0706.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m309_MA0642.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m477_MA0618.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m480_MA1519.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m398_MA0889.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m323_MA0644.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m542_MA0710.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m685_MA0722.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m688_MA0725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m689_MA0726.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m590_MA0793.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m541_MA1530.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m589_MA1549.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_87/cluster_5_node_87_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_87/cluster_5_node_87_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_87/cluster_5_node_87_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_87/cluster_5_nb_motifs_78.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224510_A3RPke


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_87/cluster_5_node_87_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m159_MA2096.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m694_MA1649.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_79/merged_consensuses/node_1/cluster_79_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_79/merged_consensuses/node_1/cluster_79_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_79 -name cluster_79 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_79/merged_consensuses/node_1/cluster_79_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_79/merged_consensuses/node_1/cluster_79_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224511_HXhSum


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_79/merged_consensuses/node_1/cluster_79_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m770_MA2509.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m159_MA2096.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m694_MA1649.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_79/merged_consensuses/node_2/cluster_79_node_2_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_79/merged_consensuses/node_2/cluster_79_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_79 -name cluster_79 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_79/merged_consensuses/node_2/cluster_79_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_79/merged_consensuses/node_2/cluster_79_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224513_fKl8xo


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_79/merged_consensuses/node_2/cluster_79_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m412_MA0522.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m651_MA1648.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_1/cluster_8_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m243_MA0817.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m96_MA0826.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_2/cluster_8_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m45_MA0678.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m97_MA0827.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_3/cluster_8_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_1/cluster_8_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_1/cluster_8_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_3/cluster_8_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_3/cluster_8_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_2/cluster_8_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_2/cluster_8_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_3/cluster_8_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224516_n2bXgp


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_2/cluster_8_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224516_DFdHce


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m616_MA1963.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m461_MA0914.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m870_MA2677.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m484_MA0703.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m46_MA0068.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m220_MA1463.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m481_MA0658.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m126_MA1476.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m131_MA1518.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m152_MA0158.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m154_MA0912.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m340_MA0900.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m588_MA0628.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m306_MA0612.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m307_MA0886.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m446_MA1505.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m295_MA1495.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m436_MA0904.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m435_MA1499.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m445_MA1504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m452_MA1507.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m432_MA0902.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m686_MA0723.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m540_MA0675.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m410_MA0892.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m434_MA0903.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m574_MA0132.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m507_MA0707.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m342_MA0887.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m343_MA0888.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m430_MA1498.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m235_MA0875.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m246_MA0876.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m479_MA0700.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m478_MA0699.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m678_MA1577.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m462_MA0654.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m399_MA0890.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m308_MA0027.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m276_MA1481.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m270_MA0882.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m619_MA0630.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m269_MA0879.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m509_MA0666.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m510_MA0708.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m411_MA0893.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m428_MA1496.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m438_MA1501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m429_MA1497.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m437_MA1500.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m439_MA1502.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m453_MA0910.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m483_MA0702.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m539_MA0674.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m180_MA2119.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m500_MA0661.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m156_MA2093.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m501_MA0706.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m309_MA0642.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m477_MA0618.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m480_MA1519.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m398_MA0889.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m323_MA0644.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m542_MA0710.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m685_MA0722.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m688_MA0725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m689_MA0726.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m590_MA0793.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m541_MA1530.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m589_MA1549.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_88/cluster_5_node_88_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_1/cluster_8_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224516_Jc4SMr


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_88/cluster_5_node_88_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_88/cluster_5_node_88_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_3/cluster_8_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_1/cluster_8_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_2/cluster_8_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_88/cluster_5_nb_motifs_79.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224516_6aat7S


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_88/cluster_5_node_88_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m703_MA0103.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m879_MA2686.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_4/cluster_8_node_4_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m192_MA0818.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m45_MA0678.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m97_MA0827.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_5/cluster_8_node_5_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_4/cluster_8_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_4/cluster_8_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_5/cluster_8_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_5/cluster_8_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_5/cluster_8_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224518_rx3RfJ


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_4/cluster_8_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224518_jUEfQS


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_5/cluster_8_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_4/cluster_8_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m155_MA0623.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m44_MA0669.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_6/cluster_8_node_6_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m243_MA0817.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m96_MA0826.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m192_MA0818.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m45_MA0678.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m97_MA0827.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_7/cluster_8_node_7_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_6/cluster_8_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_6/cluster_8_node_6_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_7/cluster_8_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_7/cluster_8_node_7_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m531_MA0502.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m530_MA0060.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m532_MA1644.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_89/cluster_5_node_89_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_89/cluster_5_node_89_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_89/cluster_5_node_89_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_7/cluster_8_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224520_9JsBzN


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_6/cluster_8_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224520_V2cfEc


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_89/cluster_5_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224520_z5gSGb


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_7/cluster_8_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_6/cluster_8_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_89/cluster_5_node_89_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m187_MA0607.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m652_MA1568.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_8/cluster_8_node_8_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_8/cluster_8_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_8/cluster_8_node_8_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_8/cluster_8_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224521_8meo1O


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_8/cluster_8_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m312_MA0820.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m703_MA0103.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m879_MA2686.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_9/cluster_8_node_9_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_9/cluster_8_node_9_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_9/cluster_8_node_9_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m275_MA1480.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m610_MA0719.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m382_MA0682.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m576_MA0714.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m564_MA0711.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m408_MA0648.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m409_MA0891.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m858_MA2597.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m199_MA1547.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m565_MA0712.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_90/cluster_5_node_90_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_90/cluster_5_node_90_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_90/cluster_5_node_90_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_9/cluster_8_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224522_Y0j8Ah


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_90/cluster_5_nb_motifs_10.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224522_hsoJnN


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_9/cluster_8_node_9_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_90/cluster_5_node_90_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m223_MA1100.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m516_MA0500.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_11/cluster_8_node_11_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m623_MA1558.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m412_MA0522.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m651_MA1648.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_10/cluster_8_node_10_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_11/cluster_8_node_11_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_11/cluster_8_node_11_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_10/cluster_8_node_10_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_10/cluster_8_node_10_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_10/cluster_8_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224523_fLWTva


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_11/cluster_8_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224523_hECW6o


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_11/cluster_8_node_11_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_10/cluster_8_node_10_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m43_MA0668.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m187_MA0607.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m652_MA1568.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_12/cluster_8_node_12_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_12/cluster_8_node_12_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_12/cluster_8_node_12_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_12/cluster_8_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224524_e8Iu4T


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_12/cluster_8_node_12_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m41_MA0665.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m42_MA0667.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_13/cluster_8_node_13_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m124_MA1468.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m243_MA0817.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m96_MA0826.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m192_MA0818.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m45_MA0678.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m97_MA0827.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_14/cluster_8_node_14_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_13/cluster_8_node_13_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_13/cluster_8_node_13_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_14/cluster_8_node_14_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_14/cluster_8_node_14_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_13/cluster_8_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224526_oNPBBG


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_14/cluster_8_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224526_zpcLlS


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_13/cluster_8_node_13_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_14/cluster_8_node_14_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m43_MA0668.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m187_MA0607.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m652_MA1568.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m124_MA1468.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m243_MA0817.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m96_MA0826.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m192_MA0818.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m45_MA0678.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m97_MA0827.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_15/cluster_8_node_15_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_15/cluster_8_node_15_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_15/cluster_8_node_15_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_15/cluster_8_nb_motifs_9.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224527_8bf3FH


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_15/cluster_8_node_15_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m123_MA1467.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m125_MA1472.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_16/cluster_8_node_16_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_16/cluster_8_node_16_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_16/cluster_8_node_16_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m155_MA0623.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m44_MA0669.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m43_MA0668.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m187_MA0607.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m652_MA1568.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m124_MA1468.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m243_MA0817.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m96_MA0826.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m192_MA0818.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m45_MA0678.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m97_MA0827.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_17/cluster_8_node_17_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_17/cluster_8_node_17_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_17/cluster_8_node_17_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_17/cluster_8_nb_motifs_11.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224529_9uxhKW


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_16/cluster_8_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224529_Q5Pj7G


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_17/cluster_8_node_17_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_16/cluster_8_node_16_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m514_MA1641.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m223_MA1100.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m516_MA0500.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_18/cluster_8_node_18_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_18/cluster_8_node_18_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_18/cluster_8_node_18_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_18/cluster_8_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224530_2eVeNw


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_18/cluster_8_node_18_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m51_MA0691.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m41_MA0665.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m42_MA0667.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_19/cluster_8_node_19_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_19/cluster_8_node_19_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_19/cluster_8_node_19_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_19/cluster_8_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224531_jLeRsW


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_19/cluster_8_node_19_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m624_MA0745.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m653_MA0830.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_20/cluster_8_node_20_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m123_MA1467.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m125_MA1472.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m51_MA0691.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m41_MA0665.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m42_MA0667.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_21/cluster_8_node_21_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_20/cluster_8_node_20_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_20/cluster_8_node_20_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_21/cluster_8_node_21_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_21/cluster_8_node_21_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m140_MA1570.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m155_MA0623.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m44_MA0669.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m43_MA0668.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m187_MA0607.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m652_MA1568.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m124_MA1468.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m243_MA0817.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m96_MA0826.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m192_MA0818.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m45_MA0678.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m97_MA0827.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_22/cluster_8_node_22_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_22/cluster_8_node_22_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_22/cluster_8_node_22_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m57_MA0724.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m616_MA1963.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m461_MA0914.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m870_MA2677.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m484_MA0703.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m46_MA0068.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m220_MA1463.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m481_MA0658.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m126_MA1476.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m131_MA1518.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m152_MA0158.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m154_MA0912.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m340_MA0900.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m588_MA0628.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m306_MA0612.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m307_MA0886.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m446_MA1505.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m295_MA1495.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m436_MA0904.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m435_MA1499.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m445_MA1504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m452_MA1507.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m432_MA0902.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m686_MA0723.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m540_MA0675.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m410_MA0892.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m434_MA0903.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m574_MA0132.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m507_MA0707.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m342_MA0887.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m343_MA0888.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m430_MA1498.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m235_MA0875.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m246_MA0876.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m479_MA0700.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m478_MA0699.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m678_MA1577.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m462_MA0654.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m399_MA0890.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m308_MA0027.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m276_MA1481.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m270_MA0882.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m619_MA0630.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m269_MA0879.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m509_MA0666.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m510_MA0708.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m411_MA0893.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m428_MA1496.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m438_MA1501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m429_MA1497.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m437_MA1500.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m439_MA1502.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m453_MA0910.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m483_MA0702.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m539_MA0674.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m180_MA2119.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m500_MA0661.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m156_MA2093.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m501_MA0706.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m309_MA0642.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m477_MA0618.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m480_MA1519.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m398_MA0889.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m323_MA0644.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m542_MA0710.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m685_MA0722.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m688_MA0725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m689_MA0726.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m590_MA0793.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m541_MA1530.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m589_MA1549.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_91/cluster_5_node_91_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_91/cluster_5_node_91_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_91/cluster_5_node_91_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_20/cluster_8_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224533_jBG6a2


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_21/cluster_8_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224533_O4RjA2


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_22/cluster_8_nb_motifs_12.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224533_d5s69m


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_20/cluster_8_node_20_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_91/cluster_5_nb_motifs_80.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224533_xbHKy6


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_21/cluster_8_node_21_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_22/cluster_8_node_22_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_91/cluster_5_node_91_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m712_MA1973.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_80/cluster_80_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_80/cluster_80_matrices_temp.tf -from tf -to tf  -attr name cluster_80 -attr accession cluster_80 -set_attr merged_AC 'jaspar_2026_core:::MA1973.2.ZKSCAN3' -set_attr merged_ID 'MA1973.2.ZKSCAN3' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_80/cluster_80_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m518_MA1109.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m519_MA1642.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_23/cluster_8_node_23_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_23/cluster_8_node_23_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_23/cluster_8_node_23_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_80/cluster_80_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_23/cluster_8_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224535_o9x6OB


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_23/cluster_8_node_23_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m791_MA2530.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_81/cluster_81_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_81/cluster_81_matrices_temp.tf -from tf -to tf  -attr name cluster_81 -attr accession cluster_81 -set_attr merged_AC 'jaspar_2026_core:::MA2530.1.ZNF773' -set_attr merged_ID 'MA2530.1.ZNF773' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_81/cluster_81_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_81/cluster_81_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m17_MA0163.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m771_MA2510.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_82/merged_consensuses/node_1/cluster_82_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_82/merged_consensuses/node_1/cluster_82_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_82 -name cluster_82 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_82/merged_consensuses/node_1/cluster_82_node_1_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m224_MA1631.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m515_MA0499.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_25/cluster_8_node_25_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m625_MA1559.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m624_MA0745.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m653_MA0830.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_24/cluster_8_node_24_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_25/cluster_8_node_25_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_25/cluster_8_node_25_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_24/cluster_8_node_24_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_24/cluster_8_node_24_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_82/merged_consensuses/node_1/cluster_82_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224537_fvr058


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_24/cluster_8_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224537_ynPbU5


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_25/cluster_8_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224537_2CwEay


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_82/merged_consensuses/node_1/cluster_82_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_24/cluster_8_node_24_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_25/cluster_8_node_25_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m755_MA1987.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m17_MA0163.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m771_MA2510.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_82/merged_consensuses/node_2/cluster_82_node_2_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_82/merged_consensuses/node_2/cluster_82_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_82 -name cluster_82 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_82/merged_consensuses/node_2/cluster_82_node_2_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m312_MA0820.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m703_MA0103.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m879_MA2686.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m623_MA1558.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m412_MA0522.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m651_MA1648.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_26/cluster_8_node_26_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_26/cluster_8_node_26_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_26/cluster_8_node_26_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_82/merged_consensuses/node_2/cluster_82_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224538_LxPQCT


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_26/cluster_8_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224538_08IDNM


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_82/merged_consensuses/node_2/cluster_82_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_26/cluster_8_node_26_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m182_MA2121.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m217_MA2341.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_83/merged_consensuses/node_1/cluster_83_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m735_MA1979.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m182_MA2121.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m217_MA2341.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_83/merged_consensuses/node_2/cluster_83_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m738_MA1656.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m735_MA1979.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m182_MA2121.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m217_MA2341.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_83/merged_consensuses/node_3/cluster_83_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_83/merged_consensuses/node_1/cluster_83_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_83 -name cluster_83 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_83/merged_consensuses/node_1/cluster_83_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_83/merged_consensuses/node_2/cluster_83_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_83 -name cluster_83 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_83/merged_consensuses/node_2/cluster_83_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_83/merged_consensuses/node_3/cluster_83_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_83 -name cluster_83 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_83/merged_consensuses/node_3/cluster_83_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_83/merged_consensuses/node_2/cluster_83_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224540_6Jczif


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_83/merged_consensuses/node_1/cluster_83_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224540_Waxg1z


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_83/merged_consensuses/node_3/cluster_83_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224540_LB4kQh


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_83/merged_consensuses/node_2/cluster_83_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_83/merged_consensuses/node_3/cluster_83_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_83/merged_consensuses/node_1/cluster_83_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m646_MA0091.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m140_MA1570.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m155_MA0623.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m44_MA0669.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m43_MA0668.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m187_MA0607.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m652_MA1568.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m124_MA1468.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m243_MA0817.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m96_MA0826.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m192_MA0818.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m45_MA0678.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m97_MA0827.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_27/cluster_8_node_27_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_27/cluster_8_node_27_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_27/cluster_8_node_27_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_27/cluster_8_nb_motifs_13.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224541_RWBR1z


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_27/cluster_8_node_27_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m318_MA0048.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m514_MA1641.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m223_MA1100.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m516_MA0500.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_28/cluster_8_node_28_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_28/cluster_8_node_28_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_28/cluster_8_node_28_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_28/cluster_8_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224542_e5pDfF


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_28/cluster_8_node_28_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m704_MA2489.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m815_MA2554.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_84/merged_consensuses/node_1/cluster_84_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_84/merged_consensuses/node_1/cluster_84_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_84 -name cluster_84 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_84/merged_consensuses/node_1/cluster_84_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_84/merged_consensuses/node_1/cluster_84_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224543_u840An


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_84/merged_consensuses/node_1/cluster_84_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m681_MA1123.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m518_MA1109.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m519_MA1642.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_29/cluster_8_node_29_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m625_MA1559.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m624_MA0745.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m653_MA0830.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m224_MA1631.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m515_MA0499.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_30/cluster_8_node_30_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m413_MA1638.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m681_MA1123.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m518_MA1109.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m519_MA1642.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_31/cluster_8_node_31_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_29/cluster_8_node_29_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_29/cluster_8_node_29_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_30/cluster_8_node_30_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_30/cluster_8_node_30_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_31/cluster_8_node_31_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_31/cluster_8_node_31_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_30/cluster_8_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224545_cGHkaY


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_29/cluster_8_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224545_W2H4Vd


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_31/cluster_8_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224545_nw0GdE


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_30/cluster_8_node_30_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_31/cluster_8_node_31_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_29/cluster_8_node_29_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m725_MA1154.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m789_MA2528.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_85/merged_consensuses/node_1/cluster_85_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_85/merged_consensuses/node_1/cluster_85_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_85 -name cluster_85 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_85/merged_consensuses/node_1/cluster_85_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_85/merged_consensuses/node_1/cluster_85_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224546_tASveb


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_85/merged_consensuses/node_1/cluster_85_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m720_MA1975.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m888_MA2330.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_86/merged_consensuses/node_1/cluster_86_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_86/merged_consensuses/node_1/cluster_86_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_86 -name cluster_86 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_86/merged_consensuses/node_1/cluster_86_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_86/merged_consensuses/node_1/cluster_86_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224548_du21Ow


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_86/merged_consensuses/node_1/cluster_86_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m242_MA1635.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m512_MA0100.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_32/cluster_8_node_32_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_32/cluster_8_node_32_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_32/cluster_8_node_32_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_32/cluster_8_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224549_qZfbex


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_32/cluster_8_node_32_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m468_MA0657.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m470_MA1514.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_87/merged_consensuses/node_1/cluster_87_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_87/merged_consensuses/node_1/cluster_87_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_87 -name cluster_87 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_87/merged_consensuses/node_1/cluster_87_node_1_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m842_MA2581.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m318_MA0048.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m514_MA1641.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m223_MA1100.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m516_MA0500.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_33/cluster_8_node_33_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_33/cluster_8_node_33_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_33/cluster_8_node_33_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_87/merged_consensuses/node_1/cluster_87_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224550_m2ruVY


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_33/cluster_8_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224550_RGTaiy


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_87/merged_consensuses/node_1/cluster_87_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_33/cluster_8_node_33_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m132_MA1524.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m646_MA0091.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m140_MA1570.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m155_MA0623.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m44_MA0669.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m43_MA0668.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m187_MA0607.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m652_MA1568.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m124_MA1468.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m243_MA0817.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m96_MA0826.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m192_MA0818.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m45_MA0678.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m97_MA0827.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_34/cluster_8_node_34_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_34/cluster_8_node_34_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_34/cluster_8_node_34_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_34/cluster_8_nb_motifs_14.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224551_ecQnrc


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_34/cluster_8_node_34_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m422_MA0895.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m57_MA0724.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m616_MA1963.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m461_MA0914.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m870_MA2677.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m484_MA0703.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m46_MA0068.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m220_MA1463.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m481_MA0658.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m126_MA1476.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m131_MA1518.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m152_MA0158.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m154_MA0912.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m340_MA0900.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m588_MA0628.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m306_MA0612.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m307_MA0886.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m446_MA1505.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m295_MA1495.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m436_MA0904.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m435_MA1499.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m445_MA1504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m452_MA1507.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m432_MA0902.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m686_MA0723.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m540_MA0675.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m410_MA0892.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m434_MA0903.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m574_MA0132.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m507_MA0707.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m342_MA0887.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m343_MA0888.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m430_MA1498.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m235_MA0875.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m246_MA0876.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m479_MA0700.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m478_MA0699.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m678_MA1577.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m462_MA0654.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m399_MA0890.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m308_MA0027.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m276_MA1481.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m270_MA0882.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m619_MA0630.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m269_MA0879.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m509_MA0666.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m510_MA0708.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m411_MA0893.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m428_MA1496.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m438_MA1501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m429_MA1497.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m437_MA1500.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m439_MA1502.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m453_MA0910.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m483_MA0702.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m539_MA0674.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m180_MA2119.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m500_MA0661.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m156_MA2093.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m501_MA0706.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m309_MA0642.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m477_MA0618.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m480_MA1519.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m398_MA0889.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m323_MA0644.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m542_MA0710.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m685_MA0722.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m688_MA0725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m689_MA0726.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m590_MA0793.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m541_MA1530.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m589_MA1549.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_92/cluster_5_node_92_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_92/cluster_5_node_92_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_92/cluster_5_node_92_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_92/cluster_5_nb_motifs_81.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224552_P6l3xF


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_92/cluster_5_node_92_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m312_MA0820.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m703_MA0103.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m879_MA2686.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m623_MA1558.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m412_MA0522.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m651_MA1648.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m625_MA1559.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m624_MA0745.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m653_MA0830.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m224_MA1631.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m515_MA0499.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_35/cluster_8_node_35_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m797_MA2536.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m312_MA0820.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m703_MA0103.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m879_MA2686.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m623_MA1558.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m412_MA0522.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m651_MA1648.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m625_MA1559.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m624_MA0745.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m653_MA0830.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m224_MA1631.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m515_MA0499.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_36/cluster_8_node_36_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_35/cluster_8_node_35_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_35/cluster_8_node_35_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_36/cluster_8_node_36_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_36/cluster_8_node_36_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_36/cluster_8_nb_motifs_12.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224553_OEYT63


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_35/cluster_8_nb_motifs_11.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224553_keOm8s


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_36/cluster_8_node_36_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_35/cluster_8_node_35_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m834_MA2573.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m851_MA2590.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_88/merged_consensuses/node_1/cluster_88_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_88/merged_consensuses/node_1/cluster_88_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_88 -name cluster_88 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_88/merged_consensuses/node_1/cluster_88_node_1_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m123_MA1467.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m125_MA1472.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m51_MA0691.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m41_MA0665.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m42_MA0667.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m842_MA2581.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m318_MA0048.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m514_MA1641.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m223_MA1100.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m516_MA0500.3_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_37/cluster_8_node_37_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_37/cluster_8_node_37_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_37/cluster_8_node_37_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_88/merged_consensuses/node_1/cluster_88_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224555_8Ji2X3


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_37/cluster_8_nb_motifs_10.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224555_3lMcAA


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_88/merged_consensuses/node_1/cluster_88_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_37/cluster_8_node_37_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m884_MA2691.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m834_MA2573.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m851_MA2590.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_88/merged_consensuses/node_2/cluster_88_node_2_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_88/merged_consensuses/node_2/cluster_88_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_88 -name cluster_88 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_88/merged_consensuses/node_2/cluster_88_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_88/merged_consensuses/node_2/cluster_88_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224556_BvMlix


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_88/merged_consensuses/node_2/cluster_88_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m759_MA1731.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m852_MA2591.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_89/merged_consensuses/node_1/cluster_89_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m743_MA1982.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m746_MA1713.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_89/merged_consensuses/node_2/cluster_89_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m759_MA1731.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m852_MA2591.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m743_MA1982.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m746_MA1713.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_89/merged_consensuses/node_3/cluster_89_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_89/merged_consensuses/node_1/cluster_89_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_89 -name cluster_89 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_89/merged_consensuses/node_1/cluster_89_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_89/merged_consensuses/node_2/cluster_89_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_89 -name cluster_89 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_89/merged_consensuses/node_2/cluster_89_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_89/merged_consensuses/node_3/cluster_89_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_89 -name cluster_89 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_89/merged_consensuses/node_3/cluster_89_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_89/merged_consensuses/node_1/cluster_89_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224558_oV63Iq


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_89/merged_consensuses/node_3/cluster_89_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224558_Apz3EP


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_89/merged_consensuses/node_2/cluster_89_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224558_ojPNxi


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_89/merged_consensuses/node_1/cluster_89_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_89/merged_consensuses/node_3/cluster_89_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_89/merged_consensuses/node_2/cluster_89_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m413_MA1638.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m681_MA1123.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m518_MA1109.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m519_MA1642.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m242_MA1635.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m512_MA0100.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_38/cluster_8_node_38_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_38/cluster_8_node_38_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_38/cluster_8_node_38_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m813_MA2552.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m878_MA2685.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m422_MA0895.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m57_MA0724.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m616_MA1963.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m461_MA0914.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m870_MA2677.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m484_MA0703.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m46_MA0068.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m220_MA1463.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m481_MA0658.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m126_MA1476.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m131_MA1518.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m152_MA0158.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m154_MA0912.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m340_MA0900.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m588_MA0628.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m306_MA0612.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m307_MA0886.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m446_MA1505.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m295_MA1495.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m436_MA0904.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m435_MA1499.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m445_MA1504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m452_MA1507.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m432_MA0902.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m686_MA0723.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m540_MA0675.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m410_MA0892.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m434_MA0903.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m574_MA0132.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m507_MA0707.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m342_MA0887.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m343_MA0888.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m430_MA1498.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m235_MA0875.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m246_MA0876.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m479_MA0700.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m478_MA0699.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m678_MA1577.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m462_MA0654.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m399_MA0890.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m308_MA0027.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m276_MA1481.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m270_MA0882.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m619_MA0630.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m269_MA0879.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m509_MA0666.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m510_MA0708.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m411_MA0893.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m428_MA1496.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m438_MA1501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m429_MA1497.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m437_MA1500.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m439_MA1502.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m453_MA0910.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m483_MA0702.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m539_MA0674.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m180_MA2119.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m500_MA0661.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m156_MA2093.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m501_MA0706.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m309_MA0642.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m477_MA0618.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m480_MA1519.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m398_MA0889.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m323_MA0644.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m542_MA0710.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m685_MA0722.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m688_MA0725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m689_MA0726.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m590_MA0793.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m541_MA1530.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m589_MA1549.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_93/cluster_5_node_93_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_93/cluster_5_node_93_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_93/cluster_5_node_93_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_38/cluster_8_nb_motifs_6.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224559_lNjRdl


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_93/cluster_5_nb_motifs_83.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224559_Ns5xCS


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_38/cluster_8_node_38_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_93/cluster_5_node_93_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m401_MA0143.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m629_MA1120.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_1/cluster_9_node_1_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m634_MA0077.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m877_MA2684.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_2/cluster_9_node_2_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m200_MA1563.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m634_MA0077.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m877_MA2684.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_3/cluster_9_node_3_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_1/cluster_9_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_9 -name cluster_9 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_1/cluster_9_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_2/cluster_9_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_9 -name cluster_9 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_2/cluster_9_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_3/cluster_9_node_3_cat.tf -v 0 -in_format tf -out_format tf -id cluster_9 -name cluster_9 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_3/cluster_9_node_3_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_3/cluster_9_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224601_apQ4kO


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_1/cluster_9_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224601_UhWVcc


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_2/cluster_9_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224601_yOJJij


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_1/cluster_9_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_3/cluster_9_node_3_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_2/cluster_9_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m631_MA1152.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m401_MA0143.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m629_MA1120.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_4/cluster_9_node_4_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m633_MA0868.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m200_MA1563.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m634_MA0077.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m877_MA2684.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_5/cluster_9_node_5_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_4/cluster_9_node_4_cat.tf -v 0 -in_format tf -out_format tf -id cluster_9 -name cluster_9 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_4/cluster_9_node_4_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_5/cluster_9_node_5_cat.tf -v 0 -in_format tf -out_format tf -id cluster_9 -name cluster_9 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_5/cluster_9_node_5_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_5/cluster_9_nb_motifs_4.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224603_0625Gl


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_4/cluster_9_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224603_6Y36EZ


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_5/cluster_9_node_5_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_4/cluster_9_node_4_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m632_MA0867.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m633_MA0868.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m200_MA1563.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m634_MA0077.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m877_MA2684.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_6/cluster_9_node_6_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_6/cluster_9_node_6_cat.tf -v 0 -in_format tf -out_format tf -id cluster_9 -name cluster_9 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_6/cluster_9_node_6_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m797_MA2536.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m312_MA0820.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m703_MA0103.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m879_MA2686.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m623_MA1558.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m412_MA0522.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m651_MA1648.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m625_MA1559.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m624_MA0745.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m653_MA0830.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m224_MA1631.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m515_MA0499.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m413_MA1638.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m681_MA1123.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m518_MA1109.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m519_MA1642.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m242_MA1635.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m512_MA0100.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_39/cluster_8_node_39_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_39/cluster_8_node_39_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_39/cluster_8_node_39_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_6/cluster_9_nb_motifs_5.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224605_W6DAFb


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_39/cluster_8_nb_motifs_18.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224605_yp5zHD


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_6/cluster_9_node_6_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_39/cluster_8_node_39_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m123_MA1467.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m125_MA1472.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m51_MA0691.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m41_MA0665.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m42_MA0667.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m842_MA2581.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m318_MA0048.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m514_MA1641.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m223_MA1100.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m516_MA0500.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m797_MA2536.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m312_MA0820.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m703_MA0103.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m879_MA2686.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m623_MA1558.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m412_MA0522.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m651_MA1648.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m625_MA1559.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m624_MA0745.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m653_MA0830.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m224_MA1631.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m515_MA0499.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m413_MA1638.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m681_MA1123.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m518_MA1109.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m519_MA1642.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m242_MA1635.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m512_MA0100.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_40/cluster_8_node_40_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_40/cluster_8_node_40_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_40/cluster_8_node_40_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_40/cluster_8_nb_motifs_28.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224607_yWrNuN


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_40/cluster_8_node_40_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m628_MA1561.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m630_MA1562.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_8/cluster_9_node_8_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m631_MA1152.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m401_MA0143.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m629_MA1120.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m632_MA0867.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m633_MA0868.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m200_MA1563.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m634_MA0077.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m877_MA2684.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_7/cluster_9_node_7_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_8/cluster_9_node_8_cat.tf -v 0 -in_format tf -out_format tf -id cluster_9 -name cluster_9 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_8/cluster_9_node_8_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_7/cluster_9_node_7_cat.tf -v 0 -in_format tf -out_format tf -id cluster_9 -name cluster_9 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_7/cluster_9_node_7_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_8/cluster_9_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224608_es8JZd


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_7/cluster_9_nb_motifs_8.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224608_6rdiyi


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_8/cluster_9_node_8_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_7/cluster_9_node_7_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m642_MA0084.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m628_MA1561.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m630_MA1562.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_9/cluster_9_node_9_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_9/cluster_9_node_9_cat.tf -v 0 -in_format tf -out_format tf -id cluster_9 -name cluster_9 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_9/cluster_9_node_9_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m132_MA1524.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m646_MA0091.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m140_MA1570.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m155_MA0623.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m44_MA0669.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m43_MA0668.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m187_MA0607.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m652_MA1568.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m124_MA1468.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m243_MA0817.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m96_MA0826.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m192_MA0818.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m45_MA0678.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m97_MA0827.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m123_MA1467.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m125_MA1472.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m51_MA0691.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m41_MA0665.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m42_MA0667.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m842_MA2581.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m318_MA0048.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m514_MA1641.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m223_MA1100.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m516_MA0500.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m797_MA2536.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m312_MA0820.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m703_MA0103.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m879_MA2686.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m623_MA1558.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m412_MA0522.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m651_MA1648.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m625_MA1559.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m624_MA0745.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m653_MA0830.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m224_MA1631.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m515_MA0499.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m413_MA1638.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m681_MA1123.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m518_MA1109.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m519_MA1642.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m242_MA1635.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m512_MA0100.4_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_41/cluster_8_node_41_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_41/cluster_8_node_41_cat.tf -v 0 -in_format tf -out_format tf -id cluster_8 -name cluster_8 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_41/cluster_8_node_41_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_9/cluster_9_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224609_3EXyrH


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_41/cluster_8_nb_motifs_42.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224609_OA4jG7


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_9/cluster_9_node_9_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_8/merged_consensuses/node_41/cluster_8_node_41_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m627_MA0442.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m631_MA1152.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m401_MA0143.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m629_MA1120.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m632_MA0867.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m633_MA0868.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m200_MA1563.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m634_MA0077.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m877_MA2684.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_10/cluster_9_node_10_cat.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m642_MA0084.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m628_MA1561.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m630_MA1562.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m627_MA0442.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m631_MA1152.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m401_MA0143.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m629_MA1120.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m632_MA0867.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m633_MA0868.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m200_MA1563.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m634_MA0077.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m877_MA2684.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_11/cluster_9_node_11_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_10/cluster_9_node_10_cat.tf -v 0 -in_format tf -out_format tf -id cluster_9 -name cluster_9 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_10/cluster_9_node_10_matrices.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_11/cluster_9_node_11_cat.tf -v 0 -in_format tf -out_format tf -id cluster_9 -name cluster_9 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_11/cluster_9_node_11_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_10/cluster_9_nb_motifs_9.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224610_NfVYax


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_11/cluster_9_nb_motifs_12.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224610_rdgA8X


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_11/cluster_9_node_11_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_10/cluster_9_node_10_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m111_MA0866.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m642_MA0084.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m628_MA1561.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m630_MA1562.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m627_MA0442.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m631_MA1152.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m401_MA0143.5_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m629_MA1120.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m632_MA0867.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m633_MA0868.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m200_MA1563.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m634_MA0077.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m877_MA2684.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_12/cluster_9_node_12_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_12/cluster_9_node_12_cat.tf -v 0 -in_format tf -out_format tf -id cluster_9 -name cluster_9 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_12/cluster_9_node_12_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_12/cluster_9_nb_motifs_13.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224616_bIsUVR


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_9/merged_consensuses/node_12/cluster_9_node_12_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m275_MA1480.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m610_MA0719.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m382_MA0682.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m576_MA0714.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m564_MA0711.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m408_MA0648.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m409_MA0891.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m858_MA2597.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m199_MA1547.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m565_MA0712.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m813_MA2552.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m878_MA2685.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m422_MA0895.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m57_MA0724.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m616_MA1963.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m461_MA0914.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m870_MA2677.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m484_MA0703.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m46_MA0068.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m220_MA1463.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m481_MA0658.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m126_MA1476.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m131_MA1518.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m152_MA0158.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m154_MA0912.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m340_MA0900.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m588_MA0628.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m306_MA0612.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m307_MA0886.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m446_MA1505.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m295_MA1495.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m436_MA0904.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m435_MA1499.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m445_MA1504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m452_MA1507.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m432_MA0902.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m686_MA0723.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m540_MA0675.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m410_MA0892.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m434_MA0903.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m574_MA0132.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m507_MA0707.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m342_MA0887.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m343_MA0888.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m430_MA1498.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m235_MA0875.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m246_MA0876.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m479_MA0700.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m478_MA0699.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m678_MA1577.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m462_MA0654.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m399_MA0890.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m308_MA0027.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m276_MA1481.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m270_MA0882.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m619_MA0630.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m269_MA0879.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m509_MA0666.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m510_MA0708.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m411_MA0893.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m428_MA1496.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m438_MA1501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m429_MA1497.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m437_MA1500.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m439_MA1502.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m453_MA0910.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m483_MA0702.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m539_MA0674.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m180_MA2119.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m500_MA0661.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m156_MA2093.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m501_MA0706.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m309_MA0642.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m477_MA0618.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m480_MA1519.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m398_MA0889.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m323_MA0644.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m542_MA0710.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m685_MA0722.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m688_MA0725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m689_MA0726.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m590_MA0793.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m541_MA1530.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m589_MA1549.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_94/cluster_5_node_94_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_94/cluster_5_node_94_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_94/cluster_5_node_94_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_94/cluster_5_nb_motifs_93.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224617_P2YJ9H


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_94/cluster_5_node_94_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m811_MA2550.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m830_MA2569.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_90/merged_consensuses/node_1/cluster_90_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_90/merged_consensuses/node_1/cluster_90_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_90 -name cluster_90 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_90/merged_consensuses/node_1/cluster_90_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_90/merged_consensuses/node_1/cluster_90_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224626_sahh3I


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_90/merged_consensuses/node_1/cluster_90_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m780_MA2519.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_91/cluster_91_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_91/cluster_91_matrices_temp.tf -from tf -to tf  -attr name cluster_91 -attr accession cluster_91 -set_attr merged_AC 'jaspar_2026_core:::MA2519.1.ZNF606' -set_attr merged_ID 'MA2519.1.ZNF606' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_91/cluster_91_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_91/cluster_91_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m701_MA1581.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_92/cluster_92_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_92/cluster_92_matrices_temp.tf -from tf -to tf  -attr name cluster_92 -attr accession cluster_92 -set_attr merged_AC 'jaspar_2026_core:::MA1581.2.ZBTB6' -set_attr merged_ID 'MA1581.2.ZBTB6' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_92/cluster_92_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_92/cluster_92_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m822_MA2561.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m823_MA2562.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_93/merged_consensuses/node_1/cluster_93_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_93/merged_consensuses/node_1/cluster_93_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_93 -name cluster_93 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_93/merged_consensuses/node_1/cluster_93_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_93/merged_consensuses/node_1/cluster_93_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224630_1F39Sy


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_93/merged_consensuses/node_1/cluster_93_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m828_MA2567.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m882_MA2689.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_94/merged_consensuses/node_1/cluster_94_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_94/merged_consensuses/node_1/cluster_94_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_94 -name cluster_94 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_94/merged_consensuses/node_1/cluster_94_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_94/merged_consensuses/node_1/cluster_94_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224632_RPmCtx


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_94/merged_consensuses/node_1/cluster_94_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m751_MA1729.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m828_MA2567.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m882_MA2689.1_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_94/merged_consensuses/node_2/cluster_94_node_2_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_94/merged_consensuses/node_2/cluster_94_node_2_cat.tf -v 0 -in_format tf -out_format tf -id cluster_94 -name cluster_94 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_94/merged_consensuses/node_2/cluster_94_node_2_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_94/merged_consensuses/node_2/cluster_94_nb_motifs_3.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224633_B21fCf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_94/merged_consensuses/node_2/cluster_94_node_2_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m595_MA1723.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m750_MA1714.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_95/merged_consensuses/node_1/cluster_95_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_95/merged_consensuses/node_1/cluster_95_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_95 -name cluster_95 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_95/merged_consensuses/node_1/cluster_95_node_1_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_95/merged_consensuses/node_1/cluster_95_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224635_ps2ghe


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_95/merged_consensuses/node_1/cluster_95_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m146_MA1588.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m734_MA0752.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_96/merged_consensuses/node_1/cluster_96_node_1_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_96/merged_consensuses/node_1/cluster_96_node_1_cat.tf -v 0 -in_format tf -out_format tf -id cluster_96 -name cluster_96 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_96/merged_consensuses/node_1/cluster_96_node_1_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m531_MA0502.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m530_MA0060.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m532_MA1644.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m275_MA1480.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m610_MA0719.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m382_MA0682.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m576_MA0714.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m564_MA0711.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m408_MA0648.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m409_MA0891.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m858_MA2597.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m199_MA1547.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m565_MA0712.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m813_MA2552.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m878_MA2685.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m422_MA0895.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m57_MA0724.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m616_MA1963.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m461_MA0914.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m870_MA2677.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m484_MA0703.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m46_MA0068.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m220_MA1463.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m481_MA0658.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m126_MA1476.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m131_MA1518.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m152_MA0158.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m154_MA0912.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m340_MA0900.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m588_MA0628.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m306_MA0612.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m307_MA0886.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m446_MA1505.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m295_MA1495.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m436_MA0904.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m435_MA1499.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m445_MA1504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m452_MA1507.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m432_MA0902.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m686_MA0723.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m540_MA0675.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m410_MA0892.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m434_MA0903.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m574_MA0132.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m507_MA0707.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m342_MA0887.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m343_MA0888.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m430_MA1498.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m235_MA0875.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m246_MA0876.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m479_MA0700.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m478_MA0699.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m678_MA1577.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m462_MA0654.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m399_MA0890.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m308_MA0027.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m276_MA1481.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m270_MA0882.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m619_MA0630.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m269_MA0879.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m509_MA0666.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m510_MA0708.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m411_MA0893.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m428_MA1496.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m438_MA1501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m429_MA1497.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m437_MA1500.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m439_MA1502.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m453_MA0910.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m483_MA0702.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m539_MA0674.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m180_MA2119.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m500_MA0661.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m156_MA2093.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m501_MA0706.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m309_MA0642.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m477_MA0618.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m480_MA1519.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m398_MA0889.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m323_MA0644.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m542_MA0710.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m685_MA0722.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m688_MA0725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m689_MA0726.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m590_MA0793.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m541_MA1530.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m589_MA1549.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_95/cluster_5_node_95_cat.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_96/merged_consensuses/node_1/cluster_96_nb_motifs_2.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224636_2drSso


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_95/cluster_5_node_95_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_95/cluster_5_node_95_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_95/cluster_5_nb_motifs_96.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224636_FIzkpg


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_96/merged_consensuses/node_1/cluster_96_node_1_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_95/cluster_5_node_95_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m144_MA1580.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_97/cluster_97_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_97/cluster_97_matrices_temp.tf -from tf -to tf  -attr name cluster_97 -attr accession cluster_97 -set_attr merged_AC 'jaspar_2026_core:::MA1580.1.ZBTB32' -set_attr merged_ID 'MA1580.1.ZBTB32' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_97/cluster_97_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_97/cluster_97_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m841_MA2580.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_98/cluster_98_matrices_temp.tf


cp /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m609_MA1554.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_99/cluster_99_matrices_temp.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_98/cluster_98_matrices_temp.tf -from tf -to tf  -attr name cluster_98 -attr accession cluster_98 -set_attr merged_AC 'jaspar_2026_core:::MA2580.1.ZNF20' -set_attr merged_ID 'MA2580.1.ZNF20' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_98/cluster_98_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_99/cluster_99_matrices_temp.tf -from tf -to tf  -attr name cluster_99 -attr accession cluster_99 -set_attr merged_AC 'jaspar_2026_core:::MA1554.2.RFX7' -set_attr merged_ID 'MA1554.2.RFX7' -set_attr type merge -set_attr merge_type sum -set_attr merge_nb 1 -v 1 -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_99/cluster_99_matrices.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_98/cluster_98_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_99/cluster_99_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m213_MA2333.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m531_MA0502.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m530_MA0060.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m532_MA1644.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m275_MA1480.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m610_MA0719.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m382_MA0682.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m576_MA0714.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m564_MA0711.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m408_MA0648.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m409_MA0891.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m858_MA2597.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m199_MA1547.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m565_MA0712.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m813_MA2552.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m878_MA2685.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m422_MA0895.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m57_MA0724.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m616_MA1963.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m461_MA0914.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m870_MA2677.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m484_MA0703.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m46_MA0068.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m220_MA1463.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m481_MA0658.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m126_MA1476.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m131_MA1518.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m152_MA0158.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m154_MA0912.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m340_MA0900.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m588_MA0628.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m306_MA0612.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m307_MA0886.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m446_MA1505.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m295_MA1495.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m436_MA0904.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m435_MA1499.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m445_MA1504.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m452_MA1507.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m432_MA0902.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m686_MA0723.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m540_MA0675.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m410_MA0892.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m434_MA0903.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m574_MA0132.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m507_MA0707.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m342_MA0887.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m343_MA0888.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m430_MA1498.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m235_MA0875.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m246_MA0876.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m479_MA0700.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m478_MA0699.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m678_MA1577.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m462_MA0654.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m399_MA0890.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m416_MA0894.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m601_MA0718.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m308_MA0027.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m276_MA1481.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m504_MA0662.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m218_MA0634.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m682_MA0721.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m596_MA0716.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m602_MA0717.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m270_MA0882.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m619_MA0630.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m269_MA0879.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m509_MA0666.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m510_MA0708.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m411_MA0893.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m428_MA1496.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m438_MA1501.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m429_MA1497.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m437_MA1500.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m439_MA1502.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m453_MA0910.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m483_MA0702.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m539_MA0674.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m180_MA2119.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m500_MA0661.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m156_MA2093.1_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m501_MA0706.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m309_MA0642.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m477_MA0618.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m480_MA1519.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m398_MA0889.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m323_MA0644.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m482_MA0701.3_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m597_MA0075.4_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m542_MA0710.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m685_MA0722.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m688_MA0725.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m689_MA0726.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m590_MA0793.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m541_MA1530.2_aligned.tf /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/jaspar_2026_core_m589_MA1549.2_aligned.tf >/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_96/cluster_5_node_96_cat.tf


/var/www/html/rsat/perl-scripts/merge-matrices -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_96/cluster_5_node_96_cat.tf -v 0 -in_format tf -out_format tf -id cluster_5 -name cluster_5 -calc sum -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_96/cluster_5_node_96_matrices.tf


/var/www/html/rsat/perl-scripts/convert-matrix -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_96/cluster_5_nb_motifs_97.tf -from tf -return info,header,margins -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/IC_test_2026-01-30.224644_qvqXrF


cat /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_clusters_information/cluster_5/merged_consensuses/node_96/cluster_5_node_96_trimmed_matrices.tf >> /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf


rm -r /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_pairwise_compa_logos


cp /var/www/html/rsat/public_html/templates_html/display_d3_tree.html /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_logo_tree.html


cp /var/www/html/rsat/public_html/templates_html/display_small_d3_tree.html /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_portable_logo_tree.html


mv /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_temporary.html /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_logo_tree.html


mv /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_temporary_2.html /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_portable_logo_tree.html


/var/www/html/rsat/perl-scripts/text-to-html -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/pairwise_compa_matrix_descriptions.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_html/pairwise_compa_matrix_descriptions.html


/var/www/html/rsat/perl-scripts/text-to-html -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/distance_table.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/distance_table.html


/var/www/html/rsat/perl-scripts/text-to-html -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/alignment_table.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/alignment_table.html


/var/www/html/rsat/perl-scripts/text-to-html -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/clusters.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/clusters.html


/var/www/html/rsat/perl-scripts/text-to-html -i /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/clusters_motif_names.tab -o /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/clusters_motif_names.html


mv -f /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_temporary_2.html /var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_portable_logo_tree.html
; matrix-clustering  -v 1 -max_matrices 300 -matrix jaspar_2026_core $RSAT/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_query_matrices.jaspar jaspar -hclust_method average -calc sum -title jaspar_2026_analysis -metric_build_tree Ncor -lth w 5 -lth cor 0.6 -lth Ncor 0.4 -quick -label_in_tree name -return json,heatmap -o $RSAT/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering
; Program version       	1.05
; Number of matrices          	300
; Output files
;	clusters_table_motif_names_html	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/clusters_motif_names.html
;	motif_richness_tsv          	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_motif_richness.tsv
;	log                         	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_log.txt
;	all_concatenated_motifs     	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_aligned_logos/All_concatenated_motifs.tf
;	motif_richness_barplot_html 	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_motif_richness_barplot.html
;	radial_tree_template        	/var/www/html/rsat/public_html/templates_html/Radial_tree_template.html
;	pairwise_compa_html         	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_html/pairwise_compa.html
;	clusters_table_html         	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/clusters.html
;	percent_table               	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/clusters_summary_percent_table.tab
;	coverage_json_folder        	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_coverage_json
;	alignment_table             	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/alignment_table.tab
;	matrix_descriptions_html    	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_html/pairwise_compa_matrix_descriptions.html
;	dynamic_coverage_heatmap_html	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_dynamic_coverage_heatmap.html
;	root_motifs                 	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_cluster_root_motifs.tf
;	heatmap_pdf                 	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_figures/heatmap.pdf
;	consensus_cladogram_json    	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_trees/tree.json
;	motif_file                  	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf
;	archive                     	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_archive.zip
;	int_align                   	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/intermediate_alignments.tab
;	logo_cladogram_html         	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_logo_tree.html
;	cluster_IDs_names           	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_cluster_IDs.txt
;	nb_clusters_table           	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/number_of_clusters.tab
;	heatmap_coverage_attributes 	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/convergency_heatmap_attributes.tab
;	small_logo_cladogram_html   	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_portable_logo_tree.html
;	heatmap_jpg                 	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_figures/heatmap.jpg
;	reference_compa_html        	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_html/Root_vs_reference_collection_compa.html
;	small_forest_export         	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_small_forest.html
;	central_motifs_IDs_temp     	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_central_motifs_IDs_temporal.tab
;	distance_table              	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/distance_table.tab
;	cluster_summary_table       	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/clusters_summary_table.tab
;	Rlog                        	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_Rlog.txt
;	matrix_descriptions         	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/pairwise_compa_matrix_descriptions.tab
;	alignment_table_html        	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/alignment_table.html
;	summary_temp                	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_SUMMARY_TEMP.html
;	clusters_table              	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/clusters.tab
;	pairwise_compa              	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/pairwise_compa.tab
;	internal_nodes_attributes_table	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/internal_nodes_attributes.tab
;	coverage_table              	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/clusters_summary_coverage_contingency_table.tab
;	prefix                      	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering
;	heatmap_collections_attributes	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/collection_heatmap_order.tab
;	root_motifs_table           	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_root_motifs_table.tab
;	heatmap_collections_d3      	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/collection_heatmap_tab.tsv
;	heatmap_coverage_d3         	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/convergency_heatmap_tab.tsv
;	central_motifs              	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_central_motifs_IDs.tab
;	input_matrices              	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data/input_motifs_processed.tf
;	html_index                  	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_html/index.html
;	ref_collection_tf           	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_reference_collection.tf
;	temp_html                   	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_temporary.html
;	hexa_colors                 	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_hexa_colors.txt
;	clusters_table_motif_names  	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/clusters_motif_names.tab
;	temp_html_2                 	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_temporary_2.html
;	summary                     	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_SUMMARY.html
;	dynamic_heatmap_html        	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_dynamic_heatmap.html
;	temp_html_3                 	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_temporary_3.html
;	distance_table_html         	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/distance_table.html
;	radial_tree                 	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_radial_tree.html
;	err_log                     	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_errors.txt
;	central_motifs_tf           	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_central_motifs_transfac.tf
;	reference_compa             	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_tables/Root_vs_reference_collection_compa.tab
; Directories
;	output                      	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL
;	data                        	/var/www/html/rsat/public_html/tmp/www-data/2026/01/30/matrix-clustering_2026-01-30.222724_OkFvjL/matrix-clustering_data
; Host name	rsat
; Job started	2026-01-30.222725
; Job done	2026-01-30.224804
; Seconds	9.13
;	user	9.13
;	system	6.11
;	cuser	5027.81
;	csystem	528.12