; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_8nt_mkv2/peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_8nt_mkv2/peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_8nt_mkv2/peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_8nt_mkv2/peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_8nt_mkv2/peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	12	5	3	0	27	1	0	26	26	4	0	8	4	11	9
c	9	6	3	22	0	28	29	0	1	24	27	17	20	10	9
g	2	2	0	3	0	0	0	0	2	1	0	3	2	6	4
t	6	16	23	4	2	0	0	3	0	0	2	1	3	2	7
//
; Sites	29
>site_0
ACACACCTACTCCCA
>site_1
TCTCACCAACCGCGA
>site_2
AGCCACCAGCCACGA
>site_3
TCTCACCAACCGCAA
>site_4
AGCCACCAGCCACGA
>site_5
ATAGACCAACCCGCC
>site_6
CTTCACCAAACACTT
>site_7
CAACACCAAGCCCCA
>site_8
ATTCACCAACTCCCA
>site_9
CTTCACCAAACTCAT
>site_10
CTTCACCAACCCCAC
>site_11
CTTCACCAACCCACT
>site_12
TCTTACCAAACCCAT
>site_13
TATTTCCAACCCTAC
>site_14
TTTCACCAACCCCAC
>site_15
CATGACCAACCCAAG
>site_16
ATTGACCAACCCACG
>site_17
GTTTACCAACCCCGG
>site_18
CTTCACCTACCGCCC
>site_19
TCTCACCAACCCCAA
>site_20
CTTCTCCACCCCACA
>site_21
GTTCACCAACCCCCT
>site_22
ATTCACCTACCACGG
>site_23
CTCCACCAACCATGC
>site_24
ACTCACCAACCAGTT
>site_25
ATTCAACAACCACAT
>site_26
AATCACCAACCCTAC
>site_27
ATTTACCAACCCCCC
>site_28
AATCACCAAACACAC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_8nt_mkv2//peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_8nt_mkv2//peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_logo_m1_rc.png
;
a	4	9	15	16	1	0	2	0	0	1	3	5
c	6	1	1	0	16	1	2	17	0	0	4	1
g	2	0	2	1	0	16	14	0	18	1	4	3
t	6	8	0	1	1	1	0	1	0	16	7	9
//
; Sites	18
>site_0
CAAACGGCGTGT
>site_1
CAAACGGTGTGT
>site_2
TTAACGGCGTCA
>site_3
CTGACGGCGTCT
>site_4
TTAACGCCGTTT
>site_5
TAAACGGCGTTA
>site_6
CTAACGCCGTTT
>site_7
TAAACGGCGTTA
>site_8
CTAACGGCGTAA
>site_9
GTAGCTGCGTGC
>site_10
ACGACGGCGGCG
>site_11
TAAATGGCGTTG
>site_12
AAAACGACGTCT
>site_13
TAAAAGGCGTTT
>site_14
CTCACGACGTAT
>site_15
GTAACGGCGTGA
>site_16
AAATCGGCGAAG
>site_17
AAAACCGCGTTT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_8nt_mkv2//peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_8nt_mkv2//peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_logo_m2_rc.png
;
a	9	6	2	1	5	1	3	22	1	26	10	10
c	2	7	0	0	1	0	0	4	0	1	9	2
g	7	4	26	28	1	27	23	1	28	1	1	5
t	11	12	1	0	22	1	3	2	0	1	9	12
//
; Sites	29
>site_0
TAGGAGGCGAGT
>site_1
ATGGTGGGGACG
>site_2
ACGGTGGTGAAT
>site_3
GTGGTGGAGATT
>site_4
GTGGTGGAGAAT
>site_5
TAGGAGGAGGAT
>site_6
TTGGTGAAGAAA
>site_7
TTGGTGAAGATA
>site_8
CCGGAGTAGACG
>site_9
TCGGAGGAGTTC
>site_10
GAGGGGTAGATA
>site_11
GGGGTGGAGAAG
>site_12
GAGGTAGAGAAA
>site_13
TTGGTGGAGAAA
>site_14
GTGGTGGAGACT
>site_15
GCGGTGGCGACA
>site_16
ACGGCGGCGATT
>site_17
AAAGTGGAGACT
>site_18
TTGGTGGAGAAG
>site_19
TGGGTTGAGATC
>site_20
TTGGAGGCGACT
>site_21
AGAGTGGAGAAT
>site_22
TCGGTGTAGCTA
>site_23
ACGGTGGAGATT
>site_24
AGTGTGGAGACA
>site_25
CTGGTGGTGACT
>site_26
AAGGTGAAGATG
>site_27
ATGATGGAGACA
>site_28
TTGGTGGAAAAA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_8nt_mkv2//peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_8nt_mkv2//peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_logo_m3_rc.png
;
a	8	8	11	2	2	0	27	2	1	1	24	6	6	13
c	4	6	1	2	1	28	0	0	0	24	1	11	9	3
g	3	8	11	1	25	0	0	0	28	2	2	1	6	4
t	14	7	6	24	1	1	2	27	0	2	2	11	8	9
//
; Sites	29
>site_0
AAATGCATGCACAC
>site_1
GTGTGCATGCATTT
>site_2
ATATGCATGCATAG
>site_3
CTATGCATGCATAT
>site_4
GGAAGCATGCATGT
>site_5
ACATGCATGCTTCC
>site_6
ACTTGCATGCACTA
>site_7
TAGTGCATGCAAGT
>site_8
TATTGCATGCAACT
>site_9
AGTTGCATGCAATA
>site_10
AGACGCATGCACCA
>site_11
TGGTGCATGCGTCT
>site_12
TGGTTCATGCATAC
>site_13
GTATGCATGAACCA
>site_14
TCATGCATACAATA
>site_15
TATTGTATGCATGA
>site_16
TAGTACATGCAAGT
>site_17
ACTTGCATGTACTA
>site_18
TTATGCATGGATCT
>site_19
TCGTGCATGCATTA
>site_20
TAATGCATGCACGA
>site_21
TGGTGCATGGCCCA
>site_22
TGGGCCATGCACCA
>site_23
ATGCACATGCACTG
>site_24
CAGTGCATGTGCAT
>site_25
CCTTGCAAGCATCA
>site_26
TGATGCTTGCAAGG
>site_27
TAGAGCTTGCAGAG
>site_28
CTCTGCAAGCTCTA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_8nt_mkv2//peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_8nt_mkv2//peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_logo_m4_rc.png
;
a	26	56	14	81	6	83	9	85	7	73	10	51	22
c	13	8	6	2	4	3	2	2	1	1	4	8	12
g	29	8	60	2	77	2	79	1	80	7	70	19	38
t	24	20	12	7	5	4	2	4	4	11	8	14	20
//
; Sites	92
>site_0
ATGAAAGAGTGTT
>site_1
CAAAAAGAGAGTT
>site_2
AACAGAAAGAGGG
>site_3
TGGTGAGAAAGAC
>site_4
CTAAGAGTGAGAA
>site_5
AAGAGTGAGAACG
>site_6
GCGAGAGATATAT
>site_7
TAGCGAGAGATAT
>site_8
GATAGCGAGAGAT
>site_9
AAGATAGCGAGAG
>site_10
AAAAGACAGAGCA
>site_11
CTTAGAGAGTGGG
>site_12
TAGAGAGTGGGAG
>site_13
GAGAGTGGGAGGA
>site_14
AGGACAGAGGGAA
>site_15
TTCTGAGAGAGTT
>site_16
CTGAGAGAGTTGG
>site_17
GTGGGAGAGAGTC
>site_18
GTGTGGGAGAGAG
>site_19
TAGAGAGAGTTGG
>site_20
AGTAGAGAGAGTT
>site_21
GAGAGAGAGACGT
>site_22
GAGAGAGAGAGAC
>site_23
GAGAGAGAGAGAG
>site_24
GTGAGAGAGAGAG
>site_25
TGGTGAGAGAGAG
>site_26
GAGAGCGAGTGGG
>site_27
TTGAGAGCGAGTG
>site_28
CAGAGGTAGAGAA
>site_29
GAGAGAGAGGACA
>site_30
TTGAGAGAGAGGA
>site_31
AATTGAGAGAGAG
>site_32
TCGAGAAAGTGGA
>site_33
AAAAGAGAAAGAA
>site_34
CAGAGAGATTGAA
>site_35
CACAGAGAGATTG
>site_36
TCCACAGAGAGAT
>site_37
GTTACAGAGAGGA
>site_38
CTTAGAGAGAAAG
>site_39
TAGAGAGAAAGAG
>site_40
GAGAGAAAGAGAG
>site_41
GAGAAAGAGAGAG
>site_42
GAAAGAGAGAGAG
>site_43
AAGAGAGAGAGAG
>site_44
GAGAGAGAGAGAA
>site_45
GAGAGAGAGAAGG
>site_46
GAGAGAGAAGGGT
>site_47
TTGTGAAAGAGAC
>site_48
ATGGGAGAGGGGA
>site_49
GTGAGCTAGAGTA
>site_50
TATATAGAGAGAC
>site_51
TATAGAGAGACAG
>site_52
TAGAGAGACAGAC
>site_53
TGTAGAGAGAAAG
>site_54
TAGAGAGAAAGAG
>site_55
GAGAGAAAGAGTG
>site_56
GAGAAAGAGTGAG
>site_57
GAAAGAGTGAGAA
>site_58
AAGAGTGAGAAAA
>site_59
ATATGAGAGAGAG
>site_60
ATGAGAGAGAGAC
>site_61
GAGAGAGAGACTT
>site_62
ACTATAGAGAGTT
>site_63
TAAAGAAAGAGAG
>site_64
AAGAAAGAGAGAG
>site_65
GAAAGAGAGAGAG
>site_66
AAGAGAGAGAGAG
>site_67
GAGAGAGAGAGAG
>site_68
GAGAGAGAGAGGA
>site_69
GAGAGAGAGGAAA
>site_70
TAGATAGATAGAA
>site_71
AAGAGAAAGCGTG
>site_72
ATAAGAGAAAGCG
>site_73
AGAAGAGAGAGTA
>site_74
AAGAGAGAGTAGC
>site_75
CAGAGAGAGATCT
>site_76
GACAGAGAGAGAT
>site_77
AAGACAGAGAGAG
>site_78
CAAAGACAGAGAG
>site_79
ACGATAGAGTGGT
>site_80
TCCCGAGAGAGAA
>site_81
CCGAGAGAGAAGT
>site_82
ATGAGAGATAAGC
>site_83
TAGAGAGAGACCC
>site_84
CGTAGAGAGAGAC
>site_85
TATAGAGAAAGAT
>site_86
TAGAGAAAGATAT
>site_87
TGAAGAGAGGGCC
>site_88
GAGAGTGAGATCT
>site_89
ATGAGAGTGAGAT
>site_90
AAGAAAGAGTGGA
>site_91
CCAAGAAAGAGTG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_8nt_mkv2//peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_8nt_mkv2//peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2026-02-26.135844
; Job done	2026-02-26.135846
; Seconds	0.16
;	user	0.16
;	system	0.07
;	cuser	1.32
;	csystem	0.22
