; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	15	7	3	4	34	1	0	33	35	4	1	4	11	11
c	10	6	2	22	1	34	35	0	1	31	29	29	14	13
g	3	2	3	4	0	0	0	1	0	2	1	4	4	5
t	9	22	29	7	2	2	2	3	1	0	6	0	8	8
//
; Sites	37
>site_0
ATTAACCAACACAC
>site_1
TCTCACCAACCGCG
>site_2
TCTCACCAACCGCA
>site_3
TTTAACCAAACCAA
>site_4
ATAGACCAACCCGC
>site_5
CTTCACCAAACACT
>site_6
CAACACCAAGCCCC
>site_7
ATTCACCAACTCCC
>site_8
AAGTACTAACCCAT
>site_9
CTTCACCAACCCCA
>site_10
CTTCACCAACCCAC
>site_11
TCTTACCAAACCCA
>site_12
TATTTCCAACCCTA
>site_13
TTTCACCAACCCCA
>site_14
CATGACCAACCCAA
>site_15
ATTGACCAACCCAC
>site_16
GTTTACCAACCCCG
>site_17
GTCGACCAACTCTC
>site_18
CTTCACCTACCGCC
>site_19
AGTTACCAACTCTC
>site_20
TCTCACCAACCCCA
>site_21
CTTCTCCACCCCAC
>site_22
GTTCACCAACCCCC
>site_23
AATCACTGACCCGA
>site_24
TTGAACCATCCCAT
>site_25
ATTCACCTACCACG
>site_26
ATTCAACAACTCTG
>site_27
ACTCACCAAGTCTC
>site_28
CTCCACCAACCATG
>site_29
ACTCACCAACCAGT
>site_30
AATCACCAACCCTA
>site_31
CATCATCAACGCAT
>site_32
ATTTACCAACCCCC
>site_33
ATACACCTACCGAT
>site_34
AGTTACCAACTCTT
>site_35
TTGACCCAACCCAT
>site_36
CTTCATCAAACCGA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m1_rc.png
;
a	11	12	23	0	1	2	1	1	1	2	11	10
c	3	5	1	25	0	14	23	0	1	5	0	4
g	1	5	0	0	24	7	1	23	0	3	1	6
t	10	3	1	0	0	2	0	1	23	15	13	5
//
; Sites	25
>site_0
ACACGCCGTTTG
>site_1
AAACGGCGTGTT
>site_2
ACACACCGTTTG
>site_3
TGACGCCGTTAA
>site_4
TAACGGCGTCAA
>site_5
AGACGCCGTCAG
>site_6
TGACGGCGTCTC
>site_7
AAACGGCGTTAA
>site_8
TAACGCCGTTTA
>site_9
AAACGGCGTTAG
>site_10
TAACGCCGTTTA
>site_11
TAACGGCGTAAA
>site_12
TTACGCCGTTAG
>site_13
GCACGCAGCTAC
>site_14
CGCCGCCGTCGT
>site_15
CAACGCCATTTA
>site_16
AGACGTCGTTTT
>site_17
AAACGACGTCTA
>site_18
AAACGCCTTTTA
>site_19
ATACGTCGTGAG
>site_20
TCACGACGTATC
>site_21
TCACGCCGTTAC
>site_22
TAACGGCGTGAA
>site_23
CTTCGCCGATTT
>site_24
AAACGCGGTTTT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m2_rc.png
;
a	19	26	7	10	3	44	3	2	2	47	5	6	14	21
c	10	6	9	4	41	0	3	1	49	0	3	7	12	6
g	11	10	1	29	1	5	0	47	1	1	0	35	8	10
t	12	10	35	9	7	3	46	2	0	4	44	4	18	15
//
; Sites	52
>site_0
TGTGCATGCATTTT
>site_1
AATGCATGCACACA
>site_2
CATGTGTGCATGCA
>site_3
CATGCACACATGAC
>site_4
GCTTCATGCTTGGT
>site_5
AAACCAAGCATGAA
>site_6
TACATATGCATGCA
>site_7
TATGCATGCATATG
>site_8
TATGCATGCATAGT
>site_9
GAACTATGCATGCA
>site_10
ATTGCGTACATGCC
>site_11
TCTTCATCCATGTC
>site_12
TATGGAAGCATGCA
>site_13
CATGCATGCTTCCA
>site_14
GAAGCATGCATGTG
>site_15
ACCACATGCATGCT
>site_16
TGTACTTGCATGCA
>site_17
AGTGCATGCAAGTA
>site_18
CTTGCATGCACTAT
>site_19
ATCACATGCATATT
>site_20
ATAATATGCATGTG
>site_21
GTTGCATGCAATAA
>site_22
ATTGCATGCAACTG
>site_23
AGCGAATGCATGTC
>site_24
GGTGCATGCGTCTC
>site_25
TATGCACGCTTGTG
>site_26
AGACCATGCATGAA
>site_27
GATTCATGCATGGT
>site_28
CATGCATGAATCAT
>site_29
GGTTCATGCATACA
>site_30
ATTGTATGCATGAA
>site_31
ACCGCATGAATGGT
>site_32
CCTGCGTGCTTGGA
>site_33
AGTACATGCAAGTT
>site_34
AAAACTTGCATGTA
>site_35
AGCTTATGCATGGA
>site_36
GATCCATGCATAAG
>site_37
TATGCATGGATCTT
>site_38
TACTCGTGCATGCA
>site_39
AATGCATGCACGAG
>site_40
CGTGCATGCATTAA
>site_41
TATTAATGCATGCA
>site_42
CATGAACGCATGAG
>site_43
CATGCGTTCATGGT
>site_44
GATGCTTGCAAGGT
>site_45
CTTGCAAGCATCAC
>site_46
ATCACATGCATGAA
>site_47
ACTTCATGCATGTG
>site_48
GATGCATTCATCTA
>site_49
AAGTTATGCATGAT
>site_50
TTCACATGCATGTT
>site_51
GAAACATGCATGTG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m3_rc.png
;
a	19	20	5	3	0	4	2	2	7	24	26
c	43	17	82	4	86	1	81	2	78	11	33
g	14	7	4	1	1	2	3	1	4	6	10
t	19	51	4	87	8	88	9	90	6	54	26
//
; Sites	95
>site_0
CACTCTTTCAT
>site_1
AACTCTCTTTT
>site_2
CCCTCTTTCTG
>site_3
TTCTCTATCAA
>site_4
GTCTTTCTCAC
>site_5
TTCTCACTCTT
>site_6
ATATCTCTCGC
>site_7
ATCTCTCGCTA
>site_8
TGCTCTGTCTT
>site_9
CACTCTCTAAG
>site_10
CCCACTCTCTA
>site_11
CCCTCTGTCCT
>site_12
AACTCTCTCAG
>site_13
GACTCTCTCCC
>site_14
CTCTCTCCCAC
>site_15
AACTCACTCAT
>site_16
AACTCTCTCTA
>site_17
CTCTCTCTACT
>site_18
ACGTCTCTCTC
>site_19
GTCTCTCTCTC
>site_20
CTCTCTCTCTC
>site_21
CTCTCTCTCTC
>site_22
CTCTCTCTCAC
>site_23
CTCTCTCACCA
>site_24
CACTCGCTCTC
>site_25
CTCGCTCTCAA
>site_26
GACTTTCTCAT
>site_27
ACCCCTCTCAA
>site_28
TCCTCTCTCTC
>site_29
CTCTCTCTCAA
>site_30
CACTTTCTCGA
>site_31
TTCTTTCTCTT
>site_32
CAATCTCTCTG
>site_33
ATCTCTCTGTG
>site_34
GGCTCTCACCA
>site_35
TCCTCTCTGTA
>site_36
TTCTCTCTAAG
>site_37
CTTTCTCTCTA
>site_38
CTCTTTCTCTC
>site_39
CTCTCTTTCTC
>site_40
CTCTCTCTTTC
>site_41
CTCTCTCTCTT
>site_42
CTCTCTCTCTC
>site_43
TTCTCTCTCTC
>site_44
CCTTCTCTCTC
>site_45
GTCTCTTTCAC
>site_46
TCCCCTCTCCC
>site_47
CCCTCTCCCAT
>site_48
GCCCCTCTCCA
>site_49
TCCTCTTTCGA
>site_50
GTCTCTCTATA
>site_51
CTGTCTCTCTA
>site_52
GTCTGTCTCTC
>site_53
TGCACTCTCAA
>site_54
TTCTCTCTACA
>site_55
CTTTCTCTCTA
>site_56
CTCTTTCTCTC
>site_57
CACTCTTTCTC
>site_58
TTCTCACTCTT
>site_59
CTCTCTCTCAT
>site_60
GTCTCTCTCTC
>site_61
AAGTCTCTCTC
>site_62
AACTCTCTATA
>site_63
AACTCTCTTGA
>site_64
CTCTCTTTCTT
>site_65
CTCTCTCTTTC
>site_66
CTCTCTCTCTT
>site_67
CTCTCTCTCTC
>site_68
CTCTCTCTCTC
>site_69
TCCTCTCTCTC
>site_70
CGCTTTCTCTT
>site_71
CTCTCTCTTCT
>site_72
TACTCTCTCTT
>site_73
AGATCTCTCTC
>site_74
ATCTCTCTCTG
>site_75
CTCTCTCTGTC
>site_76
CTCTCTGTCTT
>site_77
CACTCTATCGT
>site_78
TTCTCTCTCGG
>site_79
ACTTCTCTCTC
>site_80
GCCTCCCTCAG
>site_81
AAATCTCTCAT
>site_82
TTATCTCTCAT
>site_83
ACCTCTCTGAA
>site_84
TTCTCTTTCAA
>site_85
TACTCGCTCAT
>site_86
GGGTCTCTCTC
>site_87
GTCTCTCTCTA
>site_88
CTCTCTCTACG
>site_89
ATCTTTCTCTA
>site_90
CCCTCTCTTCA
>site_91
GGCCCTCTCTT
>site_92
ATCTCACTCTC
>site_93
CTCACTCTCAT
>site_94
CACTCTTTCTT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m4_rc.png
;
a	15	10	4	1	3	4	0	1	0	4	20	12
c	14	13	1	51	0	1	46	1	2	41	7	13
g	4	10	5	0	2	2	0	1	1	2	5	5
t	21	21	44	2	49	47	8	51	51	7	22	24
//
; Sites	54
>site_0
ATGCGTCTTCAT
>site_1
CCACTTCTTCCA
>site_2
TGTCTTCATCCA
>site_3
TCTCTTTTTCAA
>site_4
CATCTTCTTTAT
>site_5
CTACATCTTCTT
>site_6
TATCTTCTTCTT
>site_7
CTTCTTCTTTTT
>site_8
AATCTTTTTCTA
>site_9
ACTCTTCTTCTC
>site_10
TGTCTTTTTCTT
>site_11
ATTCTTCCTCGT
>site_12
TTCCTTCTTCTT
>site_13
CTTCTTCTTCAT
>site_14
TATCTTCTTCTT
>site_15
CTTCTTCTTTTT
>site_16
CTTTTTCTTCTT
>site_17
CAACTTCGTCTA
>site_18
TCTCTACTTCAT
>site_19
TGTCTTCTTCGA
>site_20
GTTATTCTTCAT
>site_21
CATCTTCTCCAC
>site_22
TGTCATCTTCTC
>site_23
TGGCTTCTTCAC
>site_24
TATCTACTTCAC
>site_25
ACTCTGCTTCGG
>site_26
ACTCATCTTCAT
>site_27
TGTCTTTTTCAC
>site_28
AGTCTTCTTAAA
>site_29
TTTCTTCTTCCC
>site_30
AATCTTCTTTTG
>site_31
CATCTTCTTAAA
>site_32
TCTCTTCTGCAC
>site_33
ATTCTTCTTCCC
>site_34
TGTCTTTTTCAT
>site_35
ACTCTTTTTCTC
>site_36
CTTCTTTTTCAC
>site_37
GCTCTTCTTTTT
>site_38
TCTCTTCTTTTT
>site_39
CTGCTTCTTCGT
>site_40
CTGCTGCTTCTT
>site_41
TGTCTTCTTACA
>site_42
GCTCTACTTCTC
>site_43
ACTCTTCTTTCA
>site_44
TTTCTTCTTAAA
>site_45
CTTTTTCTTCTT
>site_46
TGTCTTCTTGTT
>site_47
ATGCTTCTTCCG
>site_48
ACTCGTCTTCGT
>site_49
ATTCTCCTTCTG
>site_50
GATCTTCTTGAG
>site_51
TTTCTTCTCCAA
>site_52
ATACTACTTCAT
>site_53
TTTCTTTTTCTC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135827_2026-02-26.135827_NiTe41/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2026-02-26.135838
; Job done	2026-02-26.135840
; Seconds	0.15
;	user	0.15
;	system	0.04
;	cuser	1.27
;	csystem	0.16
