; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135932_2026-02-26.135932_MeLHd6/results/oligos_8nt_mkv2/peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135932_2026-02-26.135932_MeLHd6/results/oligos_8nt_mkv2/peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135932_2026-02-26.135932_MeLHd6/results/oligos_8nt_mkv2/peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135932_2026-02-26.135932_MeLHd6/results/oligos_8nt_mkv2/peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135932_2026-02-26.135932_MeLHd6/results/oligos_8nt_mkv2/peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	2	4	8	9	1	0	1	0	0	0	1	4
c	2	1	0	0	8	0	2	9	0	0	2	0
g	1	0	1	0	0	9	6	0	9	1	1	1
t	4	4	0	0	0	0	0	0	0	8	5	4
//
; Sites	9
>site_0
TTAACGCCGTTT
>site_1
TAAACGGCGTTA
>site_2
CTAACGCCGTTT
>site_3
TAAACGGCGTTA
>site_4
CTAACGGCGTAA
>site_5
ACGACGGCGGCG
>site_6
AAAACGACGTCT
>site_7
TAAAAGGCGTTT
>site_8
GTAACGGCGTGA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135932_2026-02-26.135932_MeLHd6/results/oligos_8nt_mkv2//peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135932_2026-02-26.135932_MeLHd6/results/oligos_8nt_mkv2//peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_logo_m1_rc.png
;
a	7	3	1	0	15	0	0	13	13	2	0	5	0	4	6
c	3	2	2	13	0	15	15	0	0	12	14	7	14	5	5
g	2	2	0	0	0	0	0	0	2	1	0	3	0	5	2
t	3	8	12	2	0	0	0	2	0	0	1	0	1	1	2
//
; Sites	15
>site_0
TCTCACCAACCGCGA
>site_1
AGCCACCAGCCACGA
>site_2
TCTCACCAACCGCAA
>site_3
AGCCACCAGCCACGA
>site_4
CTTCACCAAACACTT
>site_5
CAACACCAAGCCCCA
>site_6
ATTCACCAACTCCCA
>site_7
TTTCACCAACCCCAC
>site_8
GTTTACCAACCCCGG
>site_9
CTTCACCTACCGCCC
>site_10
GTTCACCAACCCCCT
>site_11
ATTCACCTACCACGG
>site_12
AATCACCAACCCTAC
>site_13
ATTTACCAACCCCCC
>site_14
AATCACCAAACACAC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135932_2026-02-26.135932_MeLHd6/results/oligos_8nt_mkv2//peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135932_2026-02-26.135932_MeLHd6/results/oligos_8nt_mkv2//peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_logo_m2_rc.png
;
a	14	11	39	37	36	35	2	4	0	0	12	13
c	5	9	2	0	2	2	1	2	0	0	6	9
g	4	11	0	2	2	3	0	0	1	42	8	3
t	19	11	1	3	2	2	39	36	41	0	16	17
//
; Sites	42
>site_0
ATATAATTTGTT
>site_1
ACAAGATTTGTA
>site_2
CGAACATTTGAC
>site_3
TGAATATTTGTT
>site_4
GTTAAATTTGTG
>site_5
TCAAAATATGTA
>site_6
TGAAAACTTGCT
>site_7
GTAAAAATTGGA
>site_8
TAAAAATTGGAA
>site_9
TACAAATTTGCT
>site_10
AGCAAATTTGTA
>site_11
TGAAAATTTGAG
>site_12
AAAGAATTTGTG
>site_13
TAAAAATTTGAT
>site_14
CCAAAGTTTGGC
>site_15
CCAAACTTTGGC
>site_16
ACAAAATTTGTT
>site_17
TAAAAATATGAA
>site_18
ATAAAATTTGCA
>site_19
TGAAAATTTGAT
>site_20
ATAAAATTTGGA
>site_21
ATAACATTTGCC
>site_22
ACAAAATTTGGC
>site_23
AGAGAATTTGCA
>site_24
AGAAAATTTGAT
>site_25
TAAAAAATTGTA
>site_26
AAATAATTTGTT
>site_27
TGAAGATTTGTT
>site_28
CCAAACTTTGAC
>site_29
TCAAAGTTTGGC
>site_30
TTAAAATTTGAT
>site_31
TAAAAGTTTGAT
>site_32
TAATAATTTGTT
>site_33
TTAAATTTTGTT
>site_34
CCAAAATATGTA
>site_35
GAAAAATTTGAT
>site_36
ATAATATTTGGT
>site_37
TGAAAATTTGTA
>site_38
GAAAAATATGTA
>site_39
TTAAAATCTGCC
>site_40
TGAAATTTTGAC
>site_41
ATAAAATCTGGT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135932_2026-02-26.135932_MeLHd6/results/oligos_8nt_mkv2//peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135932_2026-02-26.135932_MeLHd6/results/oligos_8nt_mkv2//peak-motifs_oligos-2str-noov_8nt_mkv2_pssm_count_matrices_logo_m3_rc.png
;
; Host name	rsat
; Job started	2026-02-26.135946
; Job done	2026-02-26.135947
; Seconds	0.14
;	user	0.14
;	system	0.05
;	cuser	0.75
;	csystem	0.15
