; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135932_2026-02-26.135932_MeLHd6/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135932_2026-02-26.135932_MeLHd6/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135932_2026-02-26.135932_MeLHd6/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.135932_2026-02-26.135932_MeLHd6/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	10	7	2	0	24	0	0	24	23	5	5
c	8	6	4	26	0	26	26	0	2	10	14
g	1	3	1	0	0	0	0	0	0	5	1
t	7	10	19	0	2	0	0	2	1	6	6
//
; Sites	26
>site_0
TCTCACCAACC
>site_1
ATTCACCACCG
>site_2
AGTCACCAAAA
>site_3
TCTCACCAAAA
>site_4
TCTCACCAACC
>site_5
CTTCACCAAAC
>site_6
CAACACCAAGC
>site_7
ATTCACCAACT
>site_8
TTTCACCAACC
>site_9
AACCACCAATA
>site_10
CTTCACCTACC
>site_11
AGACACCAATC
>site_12
CTCCACCAACT
>site_13
TACCACCAAAC
>site_14
GTTCACCAACC
>site_15
ATTCACCTACC
>site_16
ACTCACCAAGT
>site_17
TCTCACCATGC
>site_18
AATCACCAACC
>site_19
CGTCACCAATA
>site_20
AATCACCAAAC
>site_21
CTGCACCAAGT
>site_22
TATCTCCAAGT
>site_23
CATCACCACTC
>site_24
ACCCACCAATA
>site_25
CTTCTCCAATT
a	14	7	33	2	0	29	34	5	1	12	9
c	5	13	1	32	35	2	0	30	31	8	20
g	2	6	0	0	0	1	2	1	2	10	2
t	15	10	2	2	1	4	0	0	2	6	5
//
; Sites	36
>site_0
TCACCAACCGC
>site_1
CCACCAGCCAC
>site_2
AAACCAAACTA
>site_3
TCACCAACCGC
>site_4
CCACCAGCCAC
>site_5
ATATCAACCTC
>site_6
TAACCAAACCA
>site_7
AAACCAAACGC
>site_8
TTACCTACCAC
>site_9
ACACCAAGCCC
>site_10
GGACCAACGGC
>site_11
AAACCAACCAA
>site_12
TTACCAAACGC
>site_13
TCACCAACCCC
>site_14
TTACCAACCCC
>site_15
CGACCAACTCT
>site_16
TCACCTACCGC
>site_17
TCACCAACCCC
>site_18
TCACCTACCAC
>site_19
AGACCAAACTC
>site_20
CGAACAACCAC
>site_21
ATATCAACCTT
>site_22
TCACCAACCCT
>site_23
ACACCCACCAA
>site_24
ATACCAACTTA
>site_25
TTACCAACCCC
>site_26
TGACCAACGTC
>site_27
ACACCTACCGA
>site_28
ATAACAACCGA
>site_29
AAACCCACCAA
>site_30
CAACCAACAGC
>site_31
TTCCCAACCAA
>site_32
GCTCCAACCAT
>site_33
ATACTAACCAG
>site_34
TGTCCAACCAT
>site_35
AAACCGACCGG
a	8	8	25	0	0	22	26	21	0	7	8
c	3	7	0	26	27	1	1	5	26	9	11
g	3	3	2	1	0	2	0	1	0	5	1
t	13	9	0	0	0	2	0	0	1	6	7
//
; Sites	27
>site_0
TCACCAACCGC
>site_1
ATAGCAAACTA
>site_2
AAACCGAACAT
>site_3
GAACCAAACCA
>site_4
AAACCAAACTA
>site_5
TCACCAACCGC
>site_6
TAACCAAACCA
>site_7
AAACCAAACCA
>site_8
AAACCAAACGC
>site_9
TCACCAAACAC
>site_10
ACACCAAGCCC
>site_11
GTACCTAACGC
>site_12
TTACCAAACGC
>site_13
AAGCCAAACTT
>site_14
TTACCAACCCC
>site_15
CCACCAAACTT
>site_16
AGACCAAACTC
>site_17
TGACCGAACAA
>site_18
TTGCCAAACTT
>site_19
TCACCAACCCT
>site_20
TTACCACACAT
>site_21
TTACCAACCCC
>site_22
GGACCAAACCA
>site_23
TCACCAAACAC
>site_24
CTACCAAATAT
>site_25
TAACCCAACAA
>site_26
CTACCTAACCG
a	3	5	15	16	1	0	1	0	2	4	7	7
c	5	5	0	0	14	1	2	14	0	1	2	0
g	2	0	1	0	0	15	13	0	13	3	2	4
t	6	6	0	0	1	0	0	2	1	8	5	5
//
; Sites	16
>site_0
CCAACCGCGAAA
>site_1
TTAACGCCGTTT
>site_2
TAAACGGCGTTA
>site_3
CTAACGCCGTTT
>site_4
TAAACGGCGTTA
>site_5
CCAACGGCAAAA
>site_6
CTAACGGCGTAA
>site_7
ACGACGGCGGCG
>site_8
CCAACGGCTAAG
>site_9
AAAACGACGTCT
>site_10
TAAAAGGCGTTT
>site_11
GCAACGGTGGAG
>site_12
TTAATGGCGAGA
>site_13
GTAACGGCGTGA
>site_14
AAAACGGTGCAG
>site_15
TTAACGGCAGAT
; Host name	rsat
; Job started	2026-02-26.135942
; Job done	2026-02-26.135942
; Seconds	0.1
;	user	0.1
;	system	0.01
;	cuser	0
;	csystem	0
