; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt/peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt/peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt/peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt/peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt/peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	2	3	3	3	9	0	0	8	9	9	0	2	3
c	3	3	0	2	0	9	9	0	0	0	9	3	6
g	2	1	2	2	0	0	0	0	0	0	0	3	0
t	2	2	4	2	0	0	0	1	0	0	0	1	0
//
; Sites	9
>site_0
TTTAACCAAACCA
>site_1
CCAAACCAAACCA
>site_2
CAAAACCAAACGC
>site_3
CTTCACCAAACAC
>site_4
ACGTACCTAACGC
>site_5
GCTTACCAAACGC
>site_6
TGAGACCAAACTC
>site_7
GAGGACCAAACCA
>site_8
AATCACCAAACAC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt//peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt//peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo_m1_rc.png
;
a	0	3	0	0	8	0	0	1	1	0	4
c	6	1	8	9	0	9	9	0	1	3	0
g	0	3	1	0	1	0	0	8	0	3	2
t	3	2	0	0	0	0	0	0	7	3	3
//
; Sites	9
>site_0
TACCACCGTGA
>site_1
CACCACCGTGT
>site_2
TACCACCATCA
>site_3
CCCCACCGTCT
>site_4
TGCCACCGAGA
>site_5
CGCCACCGCTA
>site_6
CGCCGCCGTCG
>site_7
CTCCACCGTTG
>site_8
CTGCACCGTTT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt//peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt//peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo_m2_rc.png
;
a	3	5	8	2	10	0	10	0	1	1	1	0	2	2
c	4	1	1	0	0	0	1	0	9	0	7	2	3	1
g	2	3	2	8	0	10	0	1	1	0	1	1	2	4
t	2	2	0	1	1	1	0	10	0	10	2	8	4	4
//
; Sites	11
>site_0
GAAGAGATGTGTGT
>site_1
CGATTGATCTCTTT
>site_2
AAAGAGATCAATCG
>site_3
CTCAAGATCTCTCT
>site_4
AGAGAGATCTTGAG
>site_5
CAAGATCTCTCTCT
>site_6
AGAGAGAGATCTTG
>site_7
CTGGAGATCTCTTC
>site_8
GAAGAGATCTCCAG
>site_9
TCGAAGATCTCTTA
>site_10
TAAGAGATCTTCGA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt//peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt//peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo_m3_rc.png
;
a	4	2	0	0	5	0	0	5	2	2	2
c	0	0	5	5	0	5	0	0	3	1	0
g	1	2	0	0	0	0	5	0	0	0	0
t	0	1	0	0	0	0	0	0	0	2	3
//
; Sites	5
>site_0
AGCCACGACCA
>site_1
ATCCACGAATT
>site_2
AGCCACGACTA
>site_3
AACCACGACAT
>site_4
GACCACGAAAT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt//peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt//peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo_m4_rc.png
;
a	3	1	0	5	1	0	0	6	0	0	5
c	1	3	6	0	0	6	6	0	6	3	0
g	2	0	0	0	5	0	0	0	0	2	1
t	0	2	0	1	0	0	0	0	0	1	0
//
; Sites	6
>site_0
GTCAGCCACCA
>site_1
ACCAGCCACGA
>site_2
CTCAGCCACCA
>site_3
ACCAGCCACGA
>site_4
GCCTGCCACCG
>site_5
AACAACCACTA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt//peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt//peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo_m5_rc.png
;
a	5	2	1	1	7	1	0	9	9	3	2
c	2	2	0	0	1	0	0	0	0	3	1
g	2	3	8	0	1	8	0	0	0	0	4
t	0	2	0	8	0	0	9	0	0	3	2
//
; Sites	9
>site_0
CGGTGGTAAAA
>site_1
AGGTAATAACT
>site_2
GTGTAGTAATG
>site_3
AGGTCGTAATC
>site_4
CTGTAGTAACT
>site_5
GCGTAGTAATG
>site_6
ACGTAGTAAAA
>site_7
AAATAGTAACG
>site_8
AAGAAGTAAAG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt//peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt//peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo_m6_rc.png
;
a	3	5	6	0	0	0	0	0	0	0	3	4
c	1	1	1	7	0	5	7	0	0	1	0	1
g	0	1	0	0	7	2	0	6	0	0	1	1
t	3	0	0	0	0	0	0	1	7	6	3	1
//
; Sites	7
>site_0
AAACGGCGTTAA
>site_1
TAACGCCGTTTA
>site_2
AAACGGCGTTAG
>site_3
TAACGCCGTTTA
>site_4
CGCCGCCGTCGT
>site_5
AAACGCCTTTTA
>site_6
TCACGCCGTTAC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt//peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt//peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo_m7_rc.png
;
a	2	4	3	3	11	0	1	11	11	9	0	2	3
c	3	3	0	5	0	11	10	0	0	2	11	4	7
g	2	1	1	2	0	0	0	0	0	0	0	4	1
t	4	3	7	1	0	0	0	0	0	0	0	1	0
//
; Sites	11
>site_0
TCTCACCAACCGC
>site_1
TTTAACCAAACCA
>site_2
CCAAACCAAACCA
>site_3
CAAAACCAAACGC
>site_4
CTTCACCAAACAC
>site_5
GCTTACCAAACGC
>site_6
TTTCACCAACCCC
>site_7
TGAGACCAAACTC
>site_8
GAGGACCAAACCA
>site_9
AATCACCAAACAC
>site_10
AATCACAAAACGG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt//peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt//peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo_m8_rc.png
;
a	3	2	0	8	0	0	0	0	0	2	3
c	0	4	6	0	0	0	0	7	6	4	0
g	2	1	2	0	0	8	8	0	0	1	2
t	3	1	0	0	8	0	0	1	2	1	3
//
; Sites	8
>site_0
ACCATGGTCCG
>site_1
TGCATGGCCCA
>site_2
AAGATGGCCGA
>site_3
GCCATGGCTTG
>site_4
GCCATGGCTCA
>site_5
TCCATGGCCCT
>site_6
AACATGGCCAT
>site_7
TTGATGGCCAT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt//peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt//peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo_m9_rc.png
;
a	1	2	0	0	0	1	0	7	0	3	3
c	3	2	7	0	0	0	0	0	7	2	0
g	2	3	0	1	0	0	0	0	0	0	1
t	1	0	0	6	7	6	7	0	0	2	3
//
; Sites	7
>site_0
CACTTTTACCA
>site_1
CACTTTTACAT
>site_2
GCCGTTTACCT
>site_3
TGCTTATACTG
>site_4
GCCTTTTACTA
>site_5
AGCTTTTACAT
>site_6
CGCTTTTACAA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt//peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.153913_2026-02-26.153913_tNYaGF/results/oligos_6-7nt//peak-motifs_oligos-2str-noov_6-7nt_mvk1_1_pssm_count_matrices_logo_m10_rc.png
;
; Host name	rsat
; Job started	2026-02-26.153922
; Job done	2026-02-26.153925
; Seconds	0.21
;	user	0.21
;	system	0.07
;	cuser	2.61
;	csystem	0.44
