Command: peak-motifs -v 1 -title SMAD2_hela_SEACR_stringent -i $RSAT/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.205504_2026-02-26.205504_masMHe/peak-motifspeak_seq -max_seq_len 1000 -markov auto -disco oligos,dyads,positions,local_words -nmotifs 10 -minol 6 -maxol 8 -no_merge_lengths -2str -origin center -motif_db JASPAR2024_CORE_vertebrates_non-redundant tf $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -scan_markov 1 -task purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,motifs_vs_db,scan -prefix peak-motifs -noov -img_format png -outdir $RSAT/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.205504_2026-02-26.205504_masMHe
| : [matrix] waAAAATAAAaa : [matrix] bgGCCCAGCCtSss : [matrix] awAACAAAaah : [matrix] rsyCACTGCmv : [matrix] ysAAGATGsg |
: [matrix] ssCCTCCCss : [matrix] ssCtTCCCsg : [matrix] ssCCCACCss : [matrix] vcGGTGACgb : [matrix] vmAGGAAGrr 30 more motifs |