; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.234316_2026-02-26.234316_5Dj251/results/oligos_6nt_mkv1/peak-motifs_oligos-2str-noov_6nt_mkv1_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.234316_2026-02-26.234316_5Dj251/results/oligos_6nt_mkv1/peak-motifs_oligos-2str-noov_6nt_mkv1_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.234316_2026-02-26.234316_5Dj251/results/oligos_6nt_mkv1/peak-motifs_oligos-2str-noov_6nt_mkv1_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/02/26/peak-motifs.2026-02-26.234316_2026-02-26.234316_5Dj251/results/oligos_6nt_mkv1/peak-motifs_oligos-2str-noov_6nt_mkv1_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	0	0	0	0	0	0	0	1	0	0
c	1	1	1	0	1	0	0	0	0	1
g	0	0	0	1	0	0	0	0	0	0
t	0	0	0	0	0	1	1	0	1	0
//
; Sites	1
>site_0
CCCGCTTATC
a	2	0	2	0	0	0	2	2	1	1
c	0	0	0	0	0	2	0	0	1	0
g	0	2	0	2	0	0	0	0	0	0
t	0	0	0	0	2	0	0	0	0	1
//
; Sites	2
>site_0
AGAGTCAAAT
>site_1
AGAGTCAACA
; Host name	rsat
; Job started	2026-02-26.234324
; Job done	2026-02-26.234324
; Seconds	0.1
;	user	0.1
;	system	0.02
;	cuser	0
;	csystem	0
