/var/www/html/rsat/public_html/tmp/www-data/2026/03/04/peak-motifs.2026-03-04.105925_2026-03-04.105925_GBNx32/results/discovered_motifs/oligos_6nt_mkv3_m2/peak-motifs_oligos_6nt_mkv3_m2_vs_db_JASPAR2024_CORE_vertebrates_non-redundant.tab 
 compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2026/03/04/peak-motifs.2026-03-04.105925_2026-03-04.105925_GBNx32/results/discovered_motifs/oligos_6nt_mkv3_m2/peak-motifs_oligos_6nt_mkv3_m2.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2026/03/04/peak-motifs.2026-03-04.105925_2026-03-04.105925_GBNx32/results/discovered_motifs/oligos_6nt_mkv3_m2/peak-motifs_oligos_6nt_mkv3_m2_vs_db_JASPAR2024_CORE_vertebrates_non-redundant
 Program version       	1.118
 Quick mode 
 Input files
	file1 	$RSAT/public_html/tmp/www-data/2026/03/04/peak-motifs.2026-03-04.105925_2026-03-04.105925_GBNx32/results/discovered_motifs/oligos_6nt_mkv3_m2/peak-motifs_oligos_6nt_mkv3_m2.tf
	file2 	$RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt
 Output files
	match_table_txt	$RSAT/public_html/tmp/www-data/2026/03/04/peak-motifs.2026-03-04.105925_2026-03-04.105925_GBNx32/results/discovered_motifs/oligos_6nt_mkv3_m2/peak-motifs_oligos_6nt_mkv3_m2_vs_db_JASPAR2024_CORE_vertebrates_non-redundant.tab
	alignments_1ton	$RSAT/public_html/tmp/www-data/2026/03/04/peak-motifs.2026-03-04.105925_2026-03-04.105925_GBNx32/results/discovered_motifs/oligos_6nt_mkv3_m2/peak-motifs_oligos_6nt_mkv3_m2_vs_db_JASPAR2024_CORE_vertebrates_non-redundant_alignments_1ton.tab
	prefix       	$RSAT/public_html/tmp/www-data/2026/03/04/peak-motifs.2026-03-04.105925_2026-03-04.105925_GBNx32/results/discovered_motifs/oligos_6nt_mkv3_m2/peak-motifs_oligos_6nt_mkv3_m2_vs_db_JASPAR2024_CORE_vertebrates_non-redundant
	alignments_1ton_html	$RSAT/public_html/tmp/www-data/2026/03/04/peak-motifs.2026-03-04.105925_2026-03-04.105925_GBNx32/results/discovered_motifs/oligos_6nt_mkv3_m2/peak-motifs_oligos_6nt_mkv3_m2_vs_db_JASPAR2024_CORE_vertebrates_non-redundant_alignments_1ton.html
	html_index   	$RSAT/public_html/tmp/www-data/2026/03/04/peak-motifs.2026-03-04.105925_2026-03-04.105925_GBNx32/results/discovered_motifs/oligos_6nt_mkv3_m2/peak-motifs_oligos_6nt_mkv3_m2_vs_db_JASPAR2024_CORE_vertebrates_non-redundant_index.html
	match_table_html	$RSAT/public_html/tmp/www-data/2026/03/04/peak-motifs.2026-03-04.105925_2026-03-04.105925_GBNx32/results/discovered_motifs/oligos_6nt_mkv3_m2/peak-motifs_oligos_6nt_mkv3_m2_vs_db_JASPAR2024_CORE_vertebrates_non-redundant.html
 Matrices
	file1	1 matrices	$RSAT/public_html/tmp/www-data/2026/03/04/peak-motifs.2026-03-04.105925_2026-03-04.105925_GBNx32/results/discovered_motifs/oligos_6nt_mkv3_m2/peak-motifs_oligos_6nt_mkv3_m2.tf
		file1	1	13	1195
	file2	879 matrices	$RSAT/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt
		file2		1		6		20
		file2		2		14		43
		file2		3		10		25
		file2		4		15		10
		file2		5		10		17
		file2		6		10		18
		file2		7		17		25
		file2		8		15		33
		file2		9		14		16
		file2		10		6		16
		file2		11		15		1369
		...	869 more matrices
 Column content
	1	id1          	Identifier of the first matrix
	2	id2          	Identifier of the second matrix
	3	name1        	Name of the first matrix
	4	name2        	Name of the second matrix
	5	cor          	Pearson coefficient of correlation between frequency matrices
	6	Ncor         	Normalized correlation. Ncor = cor * Wr
	7	w1           	Width of the first matrix
	8	w2           	Width of the second matrix
	9	w            	Alignment length (number of overlapping columns between matrix 1 and matrix 2, as a function of the offset)
	10	W            	Total alignment length (overlapping + non-overlapping columns). W = w1 + w2 - w
	11	Wr           	Relative alignment length (overlap divided by the total alignemnt length). Wr = w/W
	12	wr1          	Alignment length relative to the width of the first matrix. wr1 = w/w1
	13	wr2          	Alignment length relative to the width of the second matrix. wr2 = w/w2
	14	strand       	"strand", i.e. orientation of matrix 2 relative to matrix 1 (D=direct;  R=reverse)
	15	offset       	shift of the second matrix relative to the first matrix (negative:left; positive: right)
id1 id2 name1 name2 cor Ncor w1 w2 w W Wr wr1 wr2 strand offset
oligos_6nt_mkv3_m2 MA1961.2 oligos_6nt_mkv3_m2 PATZ1 0.918 0.777 13 11 11 13 0.8462 0.8462 1.0000 R 1
oligos_6nt_mkv3_m2 MA0599.1 oligos_6nt_mkv3_m2 KLF5 0.917 0.705 13 10 10 13 0.7692 0.7692 1.0000 D 1
oligos_6nt_mkv3_m2 MA1630.3 oligos_6nt_mkv3_m2 ZNF281 0.883 0.679 13 10 10 13 0.7692 0.7692 1.0000 R 2
oligos_6nt_mkv3_m2 MA0741.1 oligos_6nt_mkv3_m2 KLF16 0.800 0.677 13 11 11 13 0.8462 0.8462 1.0000 D 1
oligos_6nt_mkv3_m2 MA1653.2 oligos_6nt_mkv3_m2 ZNF148 0.868 0.668 13 10 10 13 0.7692 0.7692 1.0000 D 2
oligos_6nt_mkv3_m2 MA0753.3 oligos_6nt_mkv3_m2 ZNF740 0.824 0.634 13 10 10 13 0.7692 0.7692 1.0000 D 3
oligos_6nt_mkv3_m2 MA1511.2 oligos_6nt_mkv3_m2 KLF10 0.908 0.629 13 9 9 13 0.6923 0.6923 1.0000 R 2
oligos_6nt_mkv3_m2 MA0747.2 oligos_6nt_mkv3_m2 SP8 0.734 0.621 13 11 11 13 0.8462 0.8462 1.0000 D 2
oligos_6nt_mkv3_m2 MA0079.5 oligos_6nt_mkv3_m2 SP1 0.896 0.620 13 9 9 13 0.6923 0.6923 1.0000 R 2
oligos_6nt_mkv3_m2 MA1107.3 oligos_6nt_mkv3_m2 KLF9 0.732 0.619 13 11 11 13 0.8462 0.8462 1.0000 D 1
oligos_6nt_mkv3_m2 MA0746.3 oligos_6nt_mkv3_m2 SP3 0.729 0.617 13 11 11 13 0.8462 0.8462 1.0000 D 1
oligos_6nt_mkv3_m2 MA0685.2 oligos_6nt_mkv3_m2 SP4 0.888 0.615 13 9 9 13 0.6923 0.6923 1.0000 R 2
oligos_6nt_mkv3_m2 MA0740.2 oligos_6nt_mkv3_m2 KLF14 0.884 0.612 13 9 9 13 0.6923 0.6923 1.0000 R 2
oligos_6nt_mkv3_m2 MA0039.5 oligos_6nt_mkv3_m2 KLF4 0.992 0.611 13 8 8 13 0.6154 0.6154 1.0000 D 2
oligos_6nt_mkv3_m2 MA0516.3 oligos_6nt_mkv3_m2 SP2 0.878 0.608 13 9 9 13 0.6923 0.6923 1.0000 R 2
oligos_6nt_mkv3_m2 MA0742.2 oligos_6nt_mkv3_m2 KLF12 0.868 0.601 13 9 9 13 0.6923 0.6923 1.0000 R 2
oligos_6nt_mkv3_m2 MA1564.2 oligos_6nt_mkv3_m2 SP9 0.772 0.594 13 10 10 13 0.7692 0.7692 1.0000 D 2
oligos_6nt_mkv3_m2 MA0493.3 oligos_6nt_mkv3_m2 KLF1 0.941 0.579 13 8 8 13 0.6154 0.6154 1.0000 R 2
oligos_6nt_mkv3_m2 MA1512.2 oligos_6nt_mkv3_m2 KLF11 0.739 0.568 13 10 10 13 0.7692 0.7692 1.0000 D 2
oligos_6nt_mkv3_m2 MA2328.1 oligos_6nt_mkv3_m2 ZBED4 0.718 0.552 13 10 10 13 0.7692 0.7692 1.0000 D 3
oligos_6nt_mkv3_m2 MA1959.2 oligos_6nt_mkv3_m2 KLF7 0.892 0.549 13 8 8 13 0.6154 0.6154 1.0000 R 2
oligos_6nt_mkv3_m2 MA0162.5 oligos_6nt_mkv3_m2 EGR1 0.701 0.539 13 10 10 13 0.7692 0.7692 1.0000 D 0
oligos_6nt_mkv3_m2 MA1515.2 oligos_6nt_mkv3_m2 KLF2 0.864 0.532 13 8 8 13 0.6154 0.6154 1.0000 D 2
oligos_6nt_mkv3_m2 MA1513.2 oligos_6nt_mkv3_m2 KLF15 0.861 0.530 13 8 8 13 0.6154 0.6154 1.0000 D 2
oligos_6nt_mkv3_m2 MA1517.2 oligos_6nt_mkv3_m2 KLF6 0.746 0.516 13 9 9 13 0.6923 0.6923 1.0000 D 4
oligos_6nt_mkv3_m2 MA1522.2 oligos_6nt_mkv3_m2 MAZ 0.837 0.515 13 8 8 13 0.6154 0.6154 1.0000 D 2
oligos_6nt_mkv3_m2 MA1627.2 oligos_6nt_mkv3_m2 Wt1 0.765 0.492 13 10 9 14 0.6429 0.6923 0.9000 D 4
oligos_6nt_mkv3_m2 MA1715.1 oligos_6nt_mkv3_m2 ZNF707 0.703 0.455 13 15 11 17 0.6471 0.8462 0.7333 D 2
oligos_6nt_mkv3_m2 MA0695.2 oligos_6nt_mkv3_m2 ZBTB7C 0.726 0.447 13 8 8 13 0.6154 0.6154 1.0000 D 1
oligos_6nt_mkv3_m2 MA0471.3 oligos_6nt_mkv3_m2 E2F6 0.705 0.434 13 8 8 13 0.6154 0.6154 1.0000 R 1
oligos_6nt_mkv3_m2 MA1578.2 oligos_6nt_mkv3_m2 VEZF1 0.916 0.423 13 6 6 13 0.4615 0.4615 1.0000 D 0
oligos_6nt_mkv3_m2 MA0056.3 oligos_6nt_mkv3_m2 MZF1 0.800 0.400 13 8 7 14 0.5000 0.5385 0.8750 D -1 
 Host name	rsat
 Job started	2026-03-04.105951
 Job done	2026-03-04.110002
 Seconds	1.94
	user	1.94
	system	0.62
	cuser	8
;	csystem	1.07