One-to-n alignments

Command: compare-matrices  -v 1 -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2026/03/18/compare-matrices_2026-03-18.165252_ChIgh5/compare-matrices_query_matrices.transfac -file2 $RSAT/public_html/motif_databases/footprintDB/footprintDB.plants.motif.tf -format2 tf -strand DR -lth cor 0.7 -lth Ncor 0.4 -uth match_rank 50 -return cor,Ncor,logoDP,NsEucl,NSW,match_rank,matrix_id,matrix_name,width,strand,offset,consensus,alignments_1ton -o $RSAT/public_html/tmp/www-data/2026/03/18/compare-matrices_2026-03-18.165252_ChIgh5/compare-matrices.tab

One-to-n matrix alignment; reference matrix: assembly_6_shift9 ; 251 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
assembly_6_shift9 (assembly_6)
; assembly_6; m=0 (reference); ncol1=14; shift=9; ncol=23; ---------wwGCCACGTGGCww ; Alignment reference a 0 0 0 0 0 0 0 0 0 107 84 29 67 13 295 17 16 8 8 14 44 112 88 c 0 0 0 0 0 0 0 0 0 56 57 15 214 277 3 273 4 4 12 15 222 57 59 g 0 0 0 0 0 0 0 0 0 59 57 222 15 12 4 4 273 3 277 214 15 57 56 t 0 0 0 0 0 0 0 0 0 88 112 44 14 8 8 16 17 295 13 67 29 84 107

HY5_MA0551.1_JASPAR_shift8 (HY5:MA0551.1:JASPAR) 0.966 0.846 7.575 0.966 0.984 31 9 80 16 29 33.000 1
; assembly_6 versus HY5_MA0551.1_JASPAR (HY5:MA0551.1:JASPAR); m=1/266; ncol2=16; w=-1; offset=-1; strand=D; shift=8; score= 33; --------wwtGmCACGTGkCaw ; cor=0.966; Ncor=0.846; logoDP=7.575; NsEucl=0.966; NSW=0.984; rcor=31; rNcor=9; rlogoDP=80; rNsEucl=16; rNSW=29; rank_mean=33.000; match_rank=1 a 0 0 0 0 0 0 0 0 103 108 52 9 150 0 310 3 1 0 2 4 24 183 94 c 0 0 0 0 0 0 0 0 60 56 55 8 165 317 1 311 5 9 1 1 279 30 62 g 0 0 0 0 0 0 0 0 68 62 30 279 1 1 9 5 311 1 317 165 8 55 56 t 0 0 0 0 0 0 0 0 89 94 183 24 4 2 0 1 3 310 0 150 9 52 108

HY5_MA0551.2_JASPAR_shift10 (HY5:MA0551.2:JASPAR) 0.966 0.828 7.574 0.961 0.981 32 15 81 22 30 36.000 2
; assembly_6 versus HY5_MA0551.2_JASPAR (HY5:MA0551.2:JASPAR); m=2/266; ncol2=12; w=0; offset=1; strand=D; shift=10; score= 36; ----------tGmCACGTGkCa- ; cor=0.966; Ncor=0.828; logoDP=7.574; NsEucl=0.961; NSW=0.981; rcor=32; rNcor=15; rlogoDP=81; rNsEucl=22; rNSW=30; rank_mean=36.000; match_rank=2 a 0 0 0 0 0 0 0 0 0 0 52 9 150 0 310 3 1 0 2 4 24 183 0 c 0 0 0 0 0 0 0 0 0 0 55 8 165 317 1 311 5 9 1 1 279 30 0 g 0 0 0 0 0 0 0 0 0 0 30 279 1 1 9 5 311 1 317 165 8 55 0 t 0 0 0 0 0 0 0 0 0 0 183 24 4 2 0 1 3 310 0 150 9 52 0

DPBF3_MA1338.2_JASPAR_shift7 (DPBF3:MA1338.2:JASPAR) 0.950 0.782 7.319 0.962 0.980 40 26 109 20 31 45.200 4
; assembly_6 versus DPBF3_MA1338.2_JASPAR (DPBF3:MA1338.2:JASPAR); m=3/266; ncol2=17; w=-2; offset=-2; strand=D; shift=7; score= 45.2; -------wwwtGmCACGTGkCmw ; cor=0.950; Ncor=0.782; logoDP=7.319; NsEucl=0.962; NSW=0.980; rcor=40; rNcor=26; rlogoDP=109; rNsEucl=20; rNSW=31; rank_mean=45.200; match_rank=4 a 0 0 0 0 0 0 0 836 819 709 317 74 811 6 2419 1 9 7 97 307 335 901 775 c 0 0 0 0 0 0 0 341 393 512 355 30 1580 2407 1 2409 26 9 269 17 1703 790 462 g 0 0 0 0 0 0 0 460 480 414 262 2110 17 5 5 14 2388 1 2041 671 156 299 390 t 0 0 0 0 0 0 0 792 737 794 1495 215 21 11 4 5 6 2412 22 1434 235 439 802

BPE_MA1359.2_JASPAR_rc_shift9 (BPE:MA1359.2:JASPAR_rc) 0.934 0.934 7.280 0.961 0.978 59 1 113 23 35 46.200 5
; assembly_6 versus BPE_MA1359.2_JASPAR_rc (BPE:MA1359.2:JASPAR_rc); m=4/266; ncol2=14; w=0; offset=0; strand=R; shift=9; score= 46.2; ---------rtgcCACGTGgcwy ; cor=0.934; Ncor=0.934; logoDP=7.280; NsEucl=0.961; NSW=0.978; rcor=59; rNcor=1; rlogoDP=113; rNsEucl=23; rNSW=35; rank_mean=46.200; match_rank=5 a 0 0 0 0 0 0 0 0 0 108 98 90 77 1 396 0 8 0 0 71 72 142 94 c 0 0 0 0 0 0 0 0 0 85 81 72 162 393 0 387 0 0 2 87 162 74 110 g 0 0 0 0 0 0 0 0 0 108 75 161 85 2 0 0 388 0 393 162 72 79 83 t 0 0 0 0 0 0 0 0 0 95 142 73 72 0 0 9 0 396 1 76 90 101 109

PIF3_PIF3_2__Athamap_shift8 (PIF3:PIF3:2)(Athamap) 0.895 0.737 8.352 0.944 0.956 124 55 34 56 103 74.400 10
; assembly_6 versus PIF3_PIF3_2__Athamap (PIF3:PIF3:2)(Athamap); m=7/266; ncol2=10; w=-1; offset=-1; strand=D; shift=8; score= 74.4; --------rdrvCCACGT----- ; cor=0.895; Ncor=0.737; logoDP=8.352; NsEucl=0.944; NSW=0.956; rcor=124; rNcor=55; rlogoDP=34; rNsEucl=56; rNSW=103; rank_mean=74.400; match_rank=10 a 0 0 0 0 0 0 0 0 15 9 10 8 1 0 32 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 2 4 2 11 26 32 0 32 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 9 10 13 13 5 0 0 0 32 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 6 9 7 0 0 0 0 0 0 32 0 0 0 0 0

bZIP3_2_EEAD0133_EEADannot_shift11 (bZIP3_2:EEAD0133:EEADannot) 0.918 0.721 7.362 0.940 0.961 82 69 105 75 83 82.800 11
; assembly_6 versus bZIP3_2_EEAD0133_EEADannot (bZIP3_2:EEAD0133:EEADannot); m=8/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 82.8; -----------kmCACGTGkC-- ; cor=0.918; Ncor=0.721; logoDP=7.362; NsEucl=0.940; NSW=0.961; rcor=82; rNcor=69; rlogoDP=105; rNsEucl=75; rNSW=83; rank_mean=82.800; match_rank=11 a 0 0 0 0 0 0 0 0 0 0 0 28 117 2 214 1 4 0 0 0 13 0 0 c 0 0 0 0 0 0 0 0 0 0 0 5 92 196 0 211 0 0 0 0 179 0 0 g 0 0 0 0 0 0 0 0 0 0 0 63 7 0 2 0 207 0 216 104 6 0 0 t 0 0 0 0 0 0 0 0 0 0 0 120 0 18 0 4 5 216 0 112 18 0 0

PIF3_PIF3_ArabidopsisPBM_shift11 (PIF3:PIF3:ArabidopsisPBM) 0.936 0.668 7.864 0.940 0.964 55 153 56 81 79 84.800 12
; assembly_6 versus PIF3_PIF3_ArabidopsisPBM (PIF3:PIF3:ArabidopsisPBM); m=9/266; ncol2=14; w=0; offset=2; strand=D; shift=11; score= 84.8; -----------sCCACGTGGs-- ; cor=0.936; Ncor=0.668; logoDP=7.864; NsEucl=0.940; NSW=0.964; rcor=55; rNcor=153; rlogoDP=56; rNsEucl=81; rNSW=79; rank_mean=84.800; match_rank=12 a 0 0 0 0 0 0 0 0 0 0 0 18 0 1 99 0 3 0 0 1 9 0 0 c 0 0 0 0 0 0 0 0 0 0 0 37 96 99 1 97 0 0 0 3 40 0 0 g 0 0 0 0 0 0 0 0 0 0 0 37 3 0 0 0 97 1 99 96 35 0 0 t 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 3 0 99 1 0 16 0 0

1500010105_M0364_1.02_CISBP_shift9 (1500010105:M0364_1.02:CISBP) 0.976 0.697 5.691 0.968 0.990 27 110 268 12 15 86.400 13
; assembly_6 versus 1500010105_M0364_1.02_CISBP (1500010105:M0364_1.02:CISBP); m=10/266; ncol2=16; w=0; offset=0; strand=D; shift=9; score= 86.4; ---------wyGCCACGTG---- ; cor=0.976; Ncor=0.697; logoDP=5.691; NsEucl=0.968; NSW=0.990; rcor=27; rNcor=110; rlogoDP=268; rNsEucl=12; rNSW=15; rank_mean=86.400; match_rank=13 a 0 0 0 0 0 0 0 0 0 25 8 12 21 6 100 3 4 0 6 0 0 0 0 c 0 0 0 0 0 0 0 0 0 22 46 2 79 92 0 91 10 6 9 0 0 0 0 g 0 0 0 0 0 0 0 0 0 24 6 78 0 0 0 6 84 0 79 0 0 0 0 t 0 0 0 0 0 0 0 0 0 29 40 8 0 2 0 0 2 94 6 0 0 0 0

BHLH74_MA1360.2_JASPAR_rc_shift9 (BHLH74:MA1360.2:JASPAR_rc) 0.865 0.865 7.450 0.943 0.955 208 6 91 59 106 94.000 14
; assembly_6 versus BHLH74_MA1360.2_JASPAR_rc (BHLH74:MA1360.2:JASPAR_rc); m=11/266; ncol2=14; w=0; offset=0; strand=R; shift=9; score= 94; ---------dwrbCACGTGvbwm ; cor=0.865; Ncor=0.865; logoDP=7.450; NsEucl=0.943; NSW=0.955; rcor=208; rNcor=6; rlogoDP=91; rNsEucl=59; rNSW=106; rank_mean=94.000; match_rank=14 a 0 0 0 0 0 0 0 0 0 110 115 127 49 1 439 0 3 0 1 117 92 138 122 c 0 0 0 0 0 0 0 0 0 94 92 92 148 438 0 436 0 0 0 159 110 97 121 g 0 0 0 0 0 0 0 0 0 110 102 131 114 0 0 0 436 0 438 111 118 79 96 t 0 0 0 0 0 0 0 0 0 125 130 89 128 0 0 3 0 439 0 52 119 125 100

BIM2_MA0965.2_JASPAR_shift8 (BIM2:MA0965.2:JASPAR) 0.877 0.768 6.843 0.946 0.960 161 33 165 46 89 98.800 15
; assembly_6 versus BIM2_MA0965.2_JASPAR (BIM2:MA0965.2:JASPAR); m=12/266; ncol2=18; w=-1; offset=-1; strand=D; shift=8; score= 98.8; --------wwwgkCACGTGmcww ; cor=0.877; Ncor=0.768; logoDP=6.843; NsEucl=0.946; NSW=0.960; rcor=161; rNcor=33; rlogoDP=165; rNsEucl=46; rNSW=89; rank_mean=98.800; match_rank=15 a 0 0 0 0 0 0 0 0 3104 3238 3383 2362 2197 28 10091 16 162 84 36 3003 1996 3238 2808 c 0 0 0 0 0 0 0 0 2178 2012 1958 1874 1902 10294 36 10174 23 165 20 3275 4150 1796 2323 g 0 0 0 0 0 0 0 0 2211 2323 1799 4148 3272 20 166 23 10179 36 10294 1899 1874 1964 2010 t 0 0 0 0 0 0 0 0 2885 2805 3238 1994 3007 36 85 165 14 10093 28 2201 2358 3380 3237

BZR1_MA0550.1_JASPAR_shift9 (BZR1:MA0550.1:JASPAR) 0.871 0.871 6.906 0.944 0.956 187 2 158 53 101 100.200 16
; assembly_6 versus BZR1_MA0550.1_JASPAR (BZR1:MA0550.1:JASPAR); m=13/266; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 100.2; ---------mmkmCACGTGdvmm ; cor=0.871; Ncor=0.871; logoDP=6.906; NsEucl=0.944; NSW=0.956; rcor=187; rNcor=2; rlogoDP=158; rNsEucl=53; rNSW=101; rank_mean=100.200; match_rank=16 a 0 0 0 0 0 0 0 0 0 63 55 30 49 0 147 6 0 0 6 42 41 42 81 c 0 0 0 0 0 0 0 0 0 60 47 20 66 153 2 147 0 0 5 0 53 61 39 g 0 0 0 0 0 0 0 0 0 30 27 52 26 0 0 0 153 0 142 39 43 22 0 t 0 0 0 0 0 0 0 0 0 0 24 51 12 0 4 0 0 153 0 72 16 28 33

PIF3_PIF3_1__Athamap_rc_shift7 (PIF3:PIF3:1)(Athamap_rc) 0.881 0.686 7.830 0.943 0.955 150 121 57 63 111 100.400 17
; assembly_6 versus PIF3_PIF3_1__Athamap_rc (PIF3:PIF3:1)(Athamap_rc); m=14/266; ncol2=11; w=-2; offset=-2; strand=R; shift=7; score= 100.4; -------mGwskyCACGT----- ; cor=0.881; Ncor=0.686; logoDP=7.830; NsEucl=0.943; NSW=0.955; rcor=150; rNcor=121; rlogoDP=57; rNsEucl=63; rNSW=111; rank_mean=100.400; match_rank=17 a 0 0 0 0 0 0 0 12 0 10 2 0 1 0 27 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 9 4 0 13 6 13 27 0 27 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 2 19 6 9 12 2 0 0 0 27 0 0 0 0 0 0 t 0 0 0 0 0 0 0 4 4 11 3 9 11 0 0 0 0 27 0 0 0 0 0

PIF7_MA1364.1_JASPAR_shift5 (PIF7:MA1364.1:JASPAR) 0.976 0.596 7.565 0.967 0.988 28 364 82 15 21 102.000 18
; assembly_6 versus PIF7_MA1364.1_JASPAR (PIF7:MA1364.1:JASPAR); m=15/266; ncol2=10; w=-4; offset=-4; strand=D; shift=5; score= 102; -----swkrrwsCCA-------- ; cor=0.976; Ncor=0.596; logoDP=7.565; NsEucl=0.967; NSW=0.988; rcor=28; rNcor=364; rlogoDP=82; rNsEucl=15; rNSW=21; rank_mean=102.000; match_rank=18 a 0 0 0 0 0 11 28 19 46 42 28 4 4 0 112 0 0 0 0 0 0 0 0 c 0 0 0 0 0 33 20 9 8 14 8 29 85 112 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 54 22 51 39 32 22 66 4 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 14 42 33 19 24 54 13 19 0 0 0 0 0 0 0 0 0 0

bZIP53_1_EEAD0100_EEADannot_shift11 (bZIP53_1:EEAD0100:EEADannot) 0.904 0.710 7.389 0.935 0.954 106 90 101 100 116 102.600 19
; assembly_6 versus bZIP53_1_EEAD0100_EEADannot (bZIP53_1:EEAD0100:EEADannot); m=16/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 102.6; -----------gwsACGTGGC-- ; cor=0.904; Ncor=0.710; logoDP=7.389; NsEucl=0.935; NSW=0.954; rcor=106; rNcor=90; rlogoDP=101; rNsEucl=100; rNSW=116; rank_mean=102.600; match_rank=19 a 0 0 0 0 0 0 0 0 0 0 0 212 405 0 1000 0 0 0 0 0 25 0 0 c 0 0 0 0 0 0 0 0 0 0 0 189 239 595 0 1000 7 0 0 0 975 0 0 g 0 0 0 0 0 0 0 0 0 0 0 465 0 344 0 0 993 0 1000 763 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 134 356 61 0 0 0 1000 0 237 0 0 0

ABI5_MA0931.1_JASPAR_shift10 (ABI5:MA0931.1:JASPAR) 0.932 0.666 6.580 0.945 0.970 61 164 189 48 57 103.800 20
; assembly_6 versus ABI5_MA0931.1_JASPAR (ABI5:MA0931.1:JASPAR); m=17/266; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 103.8; ----------bgmCACGTGk--- ; cor=0.932; Ncor=0.666; logoDP=6.580; NsEucl=0.945; NSW=0.970; rcor=61; rNcor=164; rlogoDP=189; rNsEucl=48; rNSW=57; rank_mean=103.800; match_rank=20 a 0 0 0 0 0 0 0 0 0 0 181 87 608 0 999 0 0 0 152 164 0 0 0 c 0 0 0 0 0 0 0 0 0 0 257 87 314 922 0 999 0 0 70 164 0 0 0 g 0 0 0 0 0 0 0 0 0 0 257 660 0 78 0 0 999 0 709 337 0 0 0 t 0 0 0 0 0 0 0 0 0 0 306 167 78 0 0 0 0 999 70 336 0 0 0

PIF3_MA0560.1_JASPAR_shift10 (PIF3:MA0560.1:JASPAR) 0.921 0.658 7.196 0.940 0.964 79 176 125 80 78 107.600 24
; assembly_6 versus PIF3_MA0560.1_JASPAR (PIF3:MA0560.1:JASPAR); m=18/266; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 107.6; ----------dgCCACGTGr--- ; cor=0.921; Ncor=0.658; logoDP=7.196; NsEucl=0.940; NSW=0.964; rcor=79; rNcor=176; rlogoDP=125; rNsEucl=80; rNSW=78; rank_mean=107.600; match_rank=24 a 0 0 0 0 0 0 0 0 0 0 210 58 19 0 527 0 0 0 0 259 0 0 0 c 0 0 0 0 0 0 0 0 0 0 26 131 399 527 0 409 0 0 0 33 0 0 0 g 0 0 0 0 0 0 0 0 0 0 148 222 94 0 0 0 527 0 527 137 0 0 0 t 0 0 0 0 0 0 0 0 0 0 143 116 15 0 0 118 0 527 0 98 0 0 0

bZIP11_1_EEAD0094_EEADannot_shift10 (bZIP11_1:EEAD0094:EEADannot) 0.915 0.654 7.104 0.937 0.960 84 183 135 90 88 116.000 27
; assembly_6 versus bZIP11_1_EEAD0094_EEADannot (bZIP11_1:EEAD0094:EEADannot); m=20/266; ncol2=8; w=0; offset=1; strand=D; shift=10; score= 116; ----------tGmCACGT----- ; cor=0.915; Ncor=0.654; logoDP=7.104; NsEucl=0.937; NSW=0.960; rcor=84; rNcor=183; rlogoDP=135; rNsEucl=90; rNSW=88; rank_mean=116.000; match_rank=27 a 0 0 0 0 0 0 0 0 0 0 104 0 328 0 1000 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 207 0 672 1000 0 1000 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 142 795 0 0 0 0 1000 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 547 205 0 0 0 0 0 1000 0 0 0 0 0

ABF1_MA0570.3_JASPAR_shift12 (ABF1:MA0570.3:JASPAR) 0.927 0.662 6.454 0.940 0.964 66 168 199 76 76 117.000 29
; assembly_6 versus ABF1_MA0570.3_JASPAR (ABF1:MA0570.3:JASPAR); m=22/266; ncol2=18; w=0; offset=3; strand=D; shift=12; score= 117; ------------aCACGTGkCA- ; cor=0.927; Ncor=0.662; logoDP=6.454; NsEucl=0.940; NSW=0.964; rcor=66; rNcor=168; rlogoDP=199; rNsEucl=76; rNSW=76; rank_mean=117.000; match_rank=29 a 0 0 0 0 0 0 0 0 0 0 0 0 593 83 1123 10 16 4 9 39 81 909 0 c 0 0 0 0 0 0 0 0 0 0 0 0 284 793 4 1099 9 8 3 11 999 36 0 g 0 0 0 0 0 0 0 0 0 0 0 0 60 124 11 15 1107 1 1123 707 28 117 0 t 0 0 0 0 0 0 0 0 0 0 0 0 204 141 3 17 9 1128 6 384 33 79 0

AREB3_MA1338.1_JASPAR_shift7 (AREB3:MA1338.1:JASPAR) 0.875 0.711 7.500 0.936 0.946 170 88 87 99 142 117.200 30
; assembly_6 versus AREB3_MA1338.1_JASPAR (AREB3:MA1338.1:JASPAR); m=23/266; ncol2=11; w=-2; offset=-2; strand=D; shift=7; score= 117.2; -------wwwggwsACGT----- ; cor=0.875; Ncor=0.711; logoDP=7.500; NsEucl=0.936; NSW=0.946; rcor=170; rNcor=88; rlogoDP=87; rNsEucl=99; rNSW=142; rank_mean=117.200; match_rank=30 a 0 0 0 0 0 0 0 246 225 200 77 142 259 1 598 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 43 52 40 35 74 93 349 0 598 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 149 142 98 351 358 0 236 0 0 598 0 0 0 0 0 0 t 0 0 0 0 0 0 0 160 179 260 135 24 246 12 0 0 0 598 0 0 0 0 0

TZP1_EEAD0061_EEADannot_shift11 (TZP1:EEAD0061:EEADannot) 0.990 0.566 7.167 0.969 0.992 11 478 131 10 12 128.400 32
; assembly_6 versus TZP1_EEAD0061_EEADannot (TZP1:EEAD0061:EEADannot); m=25/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 128.4; -----------GmCACGTG---- ; cor=0.990; Ncor=0.566; logoDP=7.167; NsEucl=0.969; NSW=0.992; rcor=11; rNcor=478; rlogoDP=131; rNsEucl=10; rNSW=12; rank_mean=128.400; match_rank=32 a 0 0 0 0 0 0 0 0 0 0 0 4 34 0 99 0 0 0 5 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 3 56 100 0 100 0 1 11 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 83 2 0 1 0 100 0 84 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 99 0 0 0 0 0

BHLH125_ZmSPT1_B73_1_m1_EEAD0211_EEADannot_shift11 (BHLH125_ZmSPT1_B73_1_m1:EEAD0211:EEADannot) 0.879 0.690 7.556 0.928 0.943 158 117 83 137 169 132.800 34
; assembly_6 versus BHLH125_ZmSPT1_B73_1_m1_EEAD0211_EEADannot (BHLH125_ZmSPT1_B73_1_m1:EEAD0211:EEADannot); m=27/266; ncol2=13; w=0; offset=2; strand=D; shift=11; score= 132.8; -----------gcCACGTGGGc- ; cor=0.879; Ncor=0.690; logoDP=7.556; NsEucl=0.928; NSW=0.943; rcor=158; rNcor=117; rlogoDP=83; rNsEucl=137; rNSW=169; rank_mean=132.800; match_rank=34 a 0 0 0 0 0 0 0 0 0 0 0 15 17 0 99 1 1 0 0 0 10 12 0 c 0 0 0 0 0 0 0 0 0 0 0 15 47 100 0 94 0 0 0 11 12 60 0 g 0 0 0 0 0 0 0 0 0 0 0 59 22 0 1 0 99 0 100 86 69 11 0 t 0 0 0 0 0 0 0 0 0 0 0 11 14 0 0 5 0 100 0 3 9 17 0

ABF2.DAP_M0217_AthalianaCistrome_shift5 (ABF2.DAP:M0217:AthalianaCistrome) 0.861 0.670 7.368 0.938 0.946 220 150 104 87 145 141.200 36
; assembly_6 versus ABF2.DAP_M0217_AthalianaCistrome (ABF2.DAP:M0217:AthalianaCistrome); m=29/266; ncol2=8; w=-4; offset=-4; strand=D; shift=5; score= 141.2; -----dawwwTGM---------- ; cor=0.861; Ncor=0.670; logoDP=7.368; NsEucl=0.938; NSW=0.946; rcor=220; rNcor=150; rlogoDP=104; rNsEucl=87; rNSW=145; rank_mean=141.200; match_rank=36 a 0 0 0 0 0 207 278 265 237 184 25 1 174 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 79 80 43 85 138 84 0 421 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 157 96 78 80 110 54 567 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 152 141 209 193 163 432 27 0 0 0 0 0 0 0 0 0 0 0

BHLH125_ZmSPT1_Mo17_1_EEAD0212_EEADannot_shift11 (BHLH125_ZmSPT1_Mo17_1:EEAD0212:EEADannot) 0.872 0.685 7.681 0.926 0.940 179 122 72 149 187 141.800 37
; assembly_6 versus BHLH125_ZmSPT1_Mo17_1_EEAD0212_EEADannot (BHLH125_ZmSPT1_Mo17_1:EEAD0212:EEADannot); m=30/266; ncol2=8; w=0; offset=2; strand=D; shift=11; score= 141.8; -----------gsCACGTG---- ; cor=0.872; Ncor=0.685; logoDP=7.681; NsEucl=0.926; NSW=0.940; rcor=179; rNcor=122; rlogoDP=72; rNsEucl=149; rNSW=187; rank_mean=141.800; match_rank=37 a 0 0 0 0 0 0 0 0 0 0 0 19 12 0 100 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 10 44 100 0 96 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 58 29 0 0 0 100 0 100 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 13 15 0 0 4 0 100 0 0 0 0 0

ABF1_MA0570.1_JASPAR_shift10 (ABF1:MA0570.1:JASPAR) 0.907 0.590 7.755 0.943 0.958 101 390 64 64 96 143.000 38
; assembly_6 versus ABF1_MA0570.1_JASPAR (ABF1:MA0570.1:JASPAR); m=31/266; ncol2=12; w=0; offset=1; strand=D; shift=10; score= 143; ----------GgmCACGTGGCm- ; cor=0.907; Ncor=0.590; logoDP=7.755; NsEucl=0.943; NSW=0.958; rcor=101; rNcor=390; rlogoDP=64; rNsEucl=64; rNSW=96; rank_mean=143.000; match_rank=38 a 0 0 0 0 0 0 0 0 0 0 0 8 19 0 43 0 0 0 0 0 0 17 0 c 0 0 0 0 0 0 0 0 0 0 4 2 16 35 0 44 0 0 0 0 44 14 0 g 0 0 0 0 0 0 0 0 0 0 32 28 0 8 1 0 44 0 44 38 0 9 0 t 0 0 0 0 0 0 0 0 0 0 8 6 9 1 0 0 0 44 0 6 0 4 0

BZIP16_MA1349.2_JASPAR_shift12 (BZIP16:MA1349.2:JASPAR) 0.896 0.640 7.284 0.926 0.945 121 213 112 159 153 151.600 40
; assembly_6 versus BZIP16_MA1349.2_JASPAR (BZIP16:MA1349.2:JASPAR); m=33/266; ncol2=11; w=0; offset=3; strand=D; shift=12; score= 151.6; ------------ysACGTGGCA- ; cor=0.896; Ncor=0.640; logoDP=7.284; NsEucl=0.926; NSW=0.945; rcor=121; rNcor=213; rlogoDP=112; rNsEucl=159; rNSW=153; rank_mean=151.600; match_rank=40 a 0 0 0 0 0 0 0 0 0 0 0 0 145 0 594 0 0 0 0 0 33 464 0 c 0 0 0 0 0 0 0 0 0 0 0 0 170 302 0 586 7 0 0 0 561 22 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 265 0 7 587 0 594 529 0 94 0 t 0 0 0 0 0 0 0 0 0 0 0 0 279 27 0 1 0 594 0 65 0 14 0

bHLH31_MA1359.1_JASPAR_shift6 (bHLH31:MA1359.1:JASPAR) 0.888 0.592 7.158 0.949 0.963 137 380 132 41 81 154.200 41
; assembly_6 versus bHLH31_MA1359.1_JASPAR (bHLH31:MA1359.1:JASPAR); m=34/266; ncol2=10; w=-3; offset=-3; strand=D; shift=6; score= 154.2; ------swkgwgrCAC------- ; cor=0.888; Ncor=0.592; logoDP=7.158; NsEucl=0.949; NSW=0.963; rcor=137; rNcor=380; rlogoDP=132; rNsEucl=41; rNSW=81; rank_mean=154.200; match_rank=41 a 0 0 0 0 0 0 138 263 97 136 164 126 153 0 595 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 179 44 122 100 116 131 142 595 0 581 0 0 0 0 0 0 0 g 0 0 0 0 0 0 215 54 204 230 83 231 194 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 63 234 172 129 232 107 106 0 0 14 0 0 0 0 0 0 0

GBF2_MA1672.1_JASPAR_shift11 (GBF2:MA1672.1:JASPAR) 0.872 0.697 5.134 0.937 0.952 180 109 358 92 122 172.200 44
; assembly_6 versus GBF2_MA1672.1_JASPAR (GBF2:MA1672.1:JASPAR); m=35/266; ncol2=15; w=0; offset=2; strand=D; shift=11; score= 172.2; -----------rhsACGTGGCAw ; cor=0.872; Ncor=0.697; logoDP=5.134; NsEucl=0.937; NSW=0.952; rcor=180; rNcor=109; rlogoDP=358; rNsEucl=92; rNSW=122; rank_mean=172.200; match_rank=44 a 0 0 0 0 0 0 0 0 0 0 0 2246 2324 560 7479 223 319 227 174 333 1027 5558 2457 c 0 0 0 0 0 0 0 0 0 0 0 1574 2084 2988 101 7122 107 127 83 153 6254 596 1420 g 0 0 0 0 0 0 0 0 0 0 0 2262 679 3420 145 221 7275 77 7553 6028 282 891 1653 t 0 0 0 0 0 0 0 0 0 0 0 1840 2835 954 197 356 221 7491 112 1408 359 877 2392

OJ1058_MA1033.1_JASPAR_rc_shift12 (OJ1058:MA1033.1:JASPAR_rc) 0.947 0.541 7.427 0.937 0.968 43 565 96 93 64 172.200 45
; assembly_6 versus OJ1058_MA1033.1_JASPAR_rc (OJ1058:MA1033.1:JASPAR_rc); m=36/266; ncol2=12; w=0; offset=3; strand=R; shift=12; score= 172.2; ------------mCACGTGk--- ; cor=0.947; Ncor=0.541; logoDP=7.427; NsEucl=0.937; NSW=0.968; rcor=43; rNcor=565; rlogoDP=96; rNsEucl=93; rNSW=64; rank_mean=172.200; match_rank=45 a 0 0 0 0 0 0 0 0 0 0 0 0 495 3 990 3 3 3 3 3 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 495 990 3 990 3 3 3 3 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 5 3 3 3 990 3 990 332 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 5 3 3 3 3 990 3 661 0 0 0

Os05g0437700_MA2401.1_JASPAR_shift12 (Os05g0437700:MA2401.1:JASPAR) 0.947 0.541 7.394 0.937 0.968 44 566 100 91 62 172.600 46
; assembly_6 versus Os05g0437700_MA2401.1_JASPAR (Os05g0437700:MA2401.1:JASPAR); m=37/266; ncol2=12; w=0; offset=3; strand=D; shift=12; score= 172.6; ------------mCACGTGk--- ; cor=0.947; Ncor=0.541; logoDP=7.394; NsEucl=0.937; NSW=0.968; rcor=44; rNcor=566; rlogoDP=100; rNsEucl=91; rNSW=62; rank_mean=172.600; match_rank=46 a 0 0 0 0 0 0 0 0 0 0 0 0 495 3.29 990 3.29 3.29 3.29 3.29 3.29 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 495 990 3.29 990 3.29 3.29 3.29 3.29 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 4.90 3.29 3.29 3.29 990 3.29 990 332 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 4.90 3.29 3.29 3.29 3.29 990 3.29 661 0 0 0

LOC_Os05g36160_M0329_1.02_CISBP_shift12 (LOC_Os05g36160:M0329_1.02:CISBP) 0.946 0.541 7.470 0.936 0.967 45 568 88 97 66 172.800 47
; assembly_6 versus LOC_Os05g36160_M0329_1.02_CISBP (LOC_Os05g36160:M0329_1.02:CISBP); m=38/266; ncol2=10; w=0; offset=3; strand=D; shift=12; score= 172.8; ------------mCACGTGk--- ; cor=0.946; Ncor=0.541; logoDP=7.470; NsEucl=0.936; NSW=0.967; rcor=45; rNcor=568; rlogoDP=88; rNsEucl=97; rNSW=66; rank_mean=172.800; match_rank=47 a 0 0 0 0 0 0 0 0 0 0 0 0 67 0 99 0 0 1 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 33 99 0 99 1 0 1 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99 0 99 50 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 99 0 50 0 0 0

O11_MA1816.1_JASPAR_rc_shift10 (O11:MA1816.1:JASPAR_rc) 0.838 0.718 6.970 0.929 0.939 314 72 151 131 198 173.200 48
; assembly_6 versus O11_MA1816.1_JASPAR_rc (O11:MA1816.1:JASPAR_rc); m=39/266; ncol2=23; w=0; offset=1; strand=R; shift=10; score= 173.2; ----------sskCACGTGmss- ; cor=0.838; Ncor=0.718; logoDP=6.970; NsEucl=0.929; NSW=0.939; rcor=314; rNcor=72; rlogoDP=151; rNsEucl=131; rNSW=198; rank_mean=173.200; match_rank=48 a 0 0 0 0 0 0 0 0 0 0 1185 1293 964 25 5440 4 3 8 161 1431 1356 1104 0 c 0 0 0 0 0 0 0 0 0 0 1539 1416 1164 5212 12 5435 15 0 61 1901 1400 1632 0 g 0 0 0 0 0 0 0 0 0 0 1631 1392 1901 60 0 17 5439 10 5216 1164 1413 1538 0 t 0 0 0 0 0 0 0 0 0 0 1105 1359 1431 163 8 4 3 5442 22 964 1291 1186 0

ABI5_MA0931.2_JASPAR_shift11 (ABI5:MA0931.2:JASPAR) 0.952 0.544 6.570 0.944 0.975 39 555 191 57 41 176.600 49
; assembly_6 versus ABI5_MA0931.2_JASPAR (ABI5:MA0931.2:JASPAR); m=40/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 176.6; -----------gmCACGTG---- ; cor=0.952; Ncor=0.544; logoDP=6.570; NsEucl=0.944; NSW=0.975; rcor=39; rNcor=555; rlogoDP=191; rNsEucl=57; rNSW=41; rank_mean=176.600; match_rank=49 a 0 0 0 0 0 0 0 0 0 0 0 87 608 0 999 0 0 0 152 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 87 314 922 0 999 0 0 70 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 660 0 78 0 0 999 0 709 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 167 78 0 0 0 0 999 70 0 0 0 0

BHLH168_ZmSPT2_B73_3_m1_EEAD0220_EEADannot_shift10 (BHLH168_ZmSPT2_B73_3_m1:EEAD0220:EEADannot) 0.864 0.679 7.892 0.921 0.931 216 134 53 215 277 179.000
; assembly_6 versus BHLH168_ZmSPT2_B73_3_m1_EEAD0220_EEADannot (BHLH168_ZmSPT2_B73_3_m1:EEAD0220:EEADannot); m=41/266; ncol2=13; w=0; offset=1; strand=D; shift=10; score= 179; ----------gCCCACGTGgc-- ; cor=0.864; Ncor=0.679; logoDP=7.892; NsEucl=0.921; NSW=0.931; rcor=216; rNcor=134; rlogoDP=53; rNsEucl=215; rNSW=277; rank_mean=179.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 19 5 0 0 100 0 3 0 0 9 12 0 0 c 0 0 0 0 0 0 0 0 0 0 15 82 97 100 0 98 0 0 0 22 60 0 0 g 0 0 0 0 0 0 0 0 0 0 56 7 3 0 0 0 97 0 100 55 16 0 0 t 0 0 0 0 0 0 0 0 0 0 10 6 0 0 0 2 0 100 0 14 12 0 0

BZIP68_MA0968.3_JASPAR_shift10 (BZIP68:MA0968.3:JASPAR) 0.881 0.629 6.952 0.924 0.942 152 249 156 177 175 181.800
; assembly_6 versus BZIP68_MA0968.3_JASPAR (BZIP68:MA0968.3:JASPAR); m=42/266; ncol2=15; w=0; offset=1; strand=D; shift=10; score= 181.8; ----------tGCCACGTsa--- ; cor=0.881; Ncor=0.629; logoDP=6.952; NsEucl=0.924; NSW=0.942; rcor=152; rNcor=249; rlogoDP=156; rNsEucl=177; rNSW=175; rank_mean=181.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 51 2 106 0 600 1 2 0 58 327 0 0 0 c 0 0 0 0 0 0 0 0 0 0 126 0 493 598 0 589 4 0 306 1 0 0 0 g 0 0 0 0 0 0 0 0 0 0 42 502 1 0 0 4 594 1 234 143 0 0 0 t 0 0 0 0 0 0 0 0 0 0 381 96 0 2 0 6 0 599 2 129 0 0 0

ABI5.ampDAP_M0204_AthalianaCistrome_shift7 (ABI5.ampDAP:M0204:AthalianaCistrome) 0.841 0.683 7.395 0.928 0.933 297 129 99 135 259 183.800
; assembly_6 versus ABI5.ampDAP_M0204_AthalianaCistrome (ABI5.ampDAP:M0204:AthalianaCistrome); m=43/266; ncol2=13; w=-2; offset=-2; strand=D; shift=7; score= 183.8; -------rrwGrwsACGTGG--- ; cor=0.841; Ncor=0.683; logoDP=7.395; NsEucl=0.928; NSW=0.933; rcor=297; rNcor=129; rlogoDP=99; rNsEucl=135; rNSW=259; rank_mean=183.800; match_rank= a 0 0 0 0 0 0 0 219 211 151 39 153 180 0 583 0 0 1 0 0 0 0 0 c 0 0 0 0 0 0 0 55 79 51 21 124 98 278 0 583 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 173 152 76 404 286 0 295 0 0 583 0 583 447 0 0 0 t 0 0 0 0 0 0 0 136 141 305 119 20 305 10 0 0 0 582 0 136 0 0 0

bHLH77_MA1362.2_JASPAR_shift8 (bHLH77:MA1362.2:JASPAR) 0.856 0.628 7.253 0.926 0.940 235 255 116 152 189 189.400
; assembly_6 versus bHLH77_MA1362.2_JASPAR (bHLH77:MA1362.2:JASPAR); m=45/266; ncol2=11; w=-1; offset=-1; strand=D; shift=8; score= 189.4; --------kwdgbCACGTG---- ; cor=0.856; Ncor=0.628; logoDP=7.253; NsEucl=0.926; NSW=0.940; rcor=235; rNcor=255; rlogoDP=116; rNsEucl=152; rNSW=189; rank_mean=189.400; match_rank= a 0 0 0 0 0 0 0 0 16 31 21 13 0 0 74 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 2 4 13 7 23 75 0 69 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 32 10 22 40 22 0 1 0 75 0 75 0 0 0 0 t 0 0 0 0 0 0 0 0 25 30 19 15 30 0 0 6 0 75 0 0 0 0 0

ABF4_MA1659.1_JASPAR_shift10 (ABF4:MA1659.1:JASPAR) 0.843 0.723 5.416 0.931 0.942 285 65 308 123 171 190.400
; assembly_6 versus ABF4_MA1659.1_JASPAR (ABF4:MA1659.1:JASPAR); m=46/266; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 190.4; ----------tkCCACGTsw--- ; cor=0.843; Ncor=0.723; logoDP=5.416; NsEucl=0.931; NSW=0.942; rcor=285; rNcor=65; rlogoDP=308; rNsEucl=123; rNSW=171; rank_mean=190.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 1452 970 660 135 5906 175 210 121 610 2322 0 0 0 c 0 0 0 0 0 0 0 0 0 0 1325 689 5169 5763 20 5666 166 58 3358 583 0 0 0 g 0 0 0 0 0 0 0 0 0 0 1105 2625 62 86 47 44 5470 52 1825 1360 0 0 0 t 0 0 0 0 0 0 0 0 0 0 2164 1762 155 62 73 161 200 5815 253 1781 0 0 0

bZIP44_1_EEAD0098_EEADannot_rc_shift12 (bZIP44_1:EEAD0098:EEADannot_rc) 0.941 0.672 2.823 0.949 0.974 49 145 676 40 45 191.000
; assembly_6 versus bZIP44_1_EEAD0098_EEADannot_rc (bZIP44_1:EEAD0098:EEADannot_rc); m=47/266; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 191; ------------hsACGTGkCr- ; cor=0.941; Ncor=0.672; logoDP=2.823; NsEucl=0.949; NSW=0.974; rcor=49; rNcor=145; rlogoDP=676; rNsEucl=40; rNSW=45; rank_mean=191.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 184 20 678 0 0 0 0 0 132 300 0 c 0 0 0 0 0 0 0 0 0 0 0 0 245 371 0 666 10 0 0 0 507 113 0 g 0 0 0 0 0 0 0 0 0 0 0 0 29 213 0 0 668 0 678 412 29 171 0 t 0 0 0 0 0 0 0 0 0 0 0 0 220 74 0 12 0 678 0 266 10 94 0

bHLH34.DAP_M0166_AthalianaCistrome_shift5 (bHLH34.DAP:M0166:AthalianaCistrome) 0.902 0.549 6.277 0.952 0.968 107 539 214 34 61 191.000
; assembly_6 versus bHLH34.DAP_M0166_AthalianaCistrome (bHLH34.DAP:M0166:AthalianaCistrome); m=48/266; ncol2=11; w=-4; offset=-4; strand=D; shift=5; score= 191; -----gtgrwwgrCAC------- ; cor=0.902; Ncor=0.549; logoDP=6.277; NsEucl=0.952; NSW=0.968; rcor=107; rNcor=539; rlogoDP=214; rNsEucl=34; rNSW=61; rank_mean=191.000; match_rank= a 0 0 0 0 0 118 123 108 154 180 152 140 205 7 549 0 0 0 0 0 0 0 0 c 0 0 0 0 0 68 69 37 124 119 124 72 135 560 6 567 0 0 0 0 0 0 0 g 0 0 0 0 0 329 62 365 162 101 122 242 153 0 9 0 0 0 0 0 0 0 0 t 0 0 0 0 0 52 313 57 127 167 169 113 74 0 3 0 0 0 0 0 0 0 0

PIL5_M0156_1.02_CISBP_shift11 (PIL5:M0156_1.02:CISBP) 0.875 0.625 5.799 0.926 0.946 166 265 252 147 146 195.200
; assembly_6 versus PIL5_M0156_1.02_CISBP (PIL5:M0156_1.02:CISBP); m=49/266; ncol2=8; w=0; offset=2; strand=D; shift=11; score= 195.2; -----------rbCACGTG---- ; cor=0.875; Ncor=0.625; logoDP=5.799; NsEucl=0.926; NSW=0.946; rcor=166; rNcor=265; rlogoDP=252; rNsEucl=147; rNSW=146; rank_mean=195.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 28 14 2 95 0 9 2 3 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 22 28 95 0 91 0 2 1 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 30 28 1 3 0 91 0 94 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 20 30 2 2 9 0 96 2 0 0 0 0

ABF2_MA0941.1_JASPAR_shift8 (ABF2:MA0941.1:JASPAR) 0.846 0.677 5.310 0.932 0.944 275 137 329 116 159 203.200
; assembly_6 versus ABF2_MA0941.1_JASPAR (ABF2:MA0941.1:JASPAR); m=52/266; ncol2=10; w=-1; offset=-1; strand=D; shift=8; score= 203.2; --------cayrACACGT----- ; cor=0.846; Ncor=0.677; logoDP=5.310; NsEucl=0.932; NSW=0.944; rcor=275; rNcor=137; rlogoDP=329; rNsEucl=116; rNSW=159; rank_mean=203.200; match_rank= a 0 0 0 0 0 0 0 0 231 308 191 274 699 0 999 0 19 19 0 0 0 0 0 c 0 0 0 0 0 0 0 0 308 231 268 120 177 840 0 917 19 19 0 0 0 0 0 g 0 0 0 0 0 0 0 0 231 231 191 403 103 0 0 0 942 19 0 0 0 0 0 t 0 0 0 0 0 0 0 0 231 231 350 202 21 159 0 82 19 942 0 0 0 0 0

bZIP68_MA1347.1_JASPAR_shift10 (bZIP68:MA1347.1:JASPAR) 0.831 0.675 6.962 0.929 0.934 344 141 153 132 251 204.200
; assembly_6 versus bZIP68_MA1347.1_JASPAR (bZIP68:MA1347.1:JASPAR); m=53/266; ncol2=6; w=0; offset=1; strand=D; shift=10; score= 204.2; ----------tGCCAC------- ; cor=0.831; Ncor=0.675; logoDP=6.962; NsEucl=0.929; NSW=0.934; rcor=344; rNcor=141; rlogoDP=153; rNsEucl=132; rNSW=251; rank_mean=204.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 51 2 106 0 600 1 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 126 0 493 598 0 589 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 42 502 1 0 0 4 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 381 96 0 2 0 6 0 0 0 0 0 0 0

ATAREB1_M0256_1.02_CISBP_shift8 (ATAREB1:M0256_1.02:CISBP) 0.846 0.677 5.283 0.932 0.944 276 138 337 115 158 204.800
; assembly_6 versus ATAREB1_M0256_1.02_CISBP (ATAREB1:M0256_1.02:CISBP); m=54/266; ncol2=6; w=-1; offset=-1; strand=D; shift=8; score= 204.8; --------cayrAC--------- ; cor=0.846; Ncor=0.677; logoDP=5.283; NsEucl=0.932; NSW=0.944; rcor=276; rNcor=138; rlogoDP=337; rNsEucl=115; rNSW=158; rank_mean=204.800; match_rank= a 0 0 0 0 0 0 0 0 23 31 19 28 70 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 31 23 27 12 18 84 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 23 23 19 40 10 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 23 23 35 20 2 16 0 0 0 0 0 0 0 0 0

DPBF3_MA1338.3_JASPAR_rc_shift11 (DPBF3:MA1338.3:JASPAR_rc) 0.953 0.749 0.876 0.954 0.976 38 45 880 32 37 206.400
; assembly_6 versus DPBF3_MA1338.3_JASPAR_rc (DPBF3:MA1338.3:JASPAR_rc); m=55/266; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 206.4; -----------GmCACGTGkC-- ; cor=0.953; Ncor=0.749; logoDP=0.876; NsEucl=0.954; NSW=0.976; rcor=38; rNcor=45; rlogoDP=880; rNsEucl=32; rNSW=37; rank_mean=206.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 235 1434 22 2412 6 5 4 11 21 215 0 0 c 0 0 0 0 0 0 0 0 0 0 0 156 671 2041 1 2388 14 5 5 17 2110 0 0 g 0 0 0 0 0 0 0 0 0 0 0 1703 17 269 9 26 2409 1 2407 1580 30 0 0 t 0 0 0 0 0 0 0 0 0 0 0 335 307 97 7 9 1 2419 6 811 74 0 0

bZIP1_2_EEAD0093_EEADannot_rc_shift11 (bZIP1_2:EEAD0093:EEADannot_rc) 0.943 0.741 1.145 0.947 0.969 48 53 829 44 59 206.600
; assembly_6 versus bZIP1_2_EEAD0093_EEADannot_rc (bZIP1_2:EEAD0093:EEADannot_rc); m=56/266; ncol2=9; w=0; offset=2; strand=R; shift=11; score= 206.6; -----------kmCACGTGk--- ; cor=0.943; Ncor=0.741; logoDP=1.145; NsEucl=0.947; NSW=0.969; rcor=48; rNcor=53; rlogoDP=829; rNsEucl=44; rNSW=59; rank_mean=206.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 27 147 0 264 5 1 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 15 116 256 0 258 2 1 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 119 2 0 1 0 262 0 265 174 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 104 0 9 0 2 0 264 0 91 0 0 0

ABI5_M0261_1.02_CISBP_rc_shift12 (ABI5:M0261_1.02:CISBP_rc) 0.932 0.665 2.626 0.945 0.970 62 165 702 49 58 207.200
; assembly_6 versus ABI5_M0261_1.02_CISBP_rc (ABI5:M0261_1.02:CISBP_rc); m=57/266; ncol2=6; w=0; offset=3; strand=R; shift=12; score= 207.2; ------------mCACGT----- ; cor=0.932; Ncor=0.665; logoDP=2.626; NsEucl=0.945; NSW=0.970; rcor=62; rNcor=165; rlogoDP=702; rNsEucl=49; rNSW=58; rank_mean=207.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 34 7 100 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 34 71 0 100 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 16 7 0 0 100 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 16 15 0 0 0 100 0 0 0 0 0

ABF3_MA0930.2_JASPAR_shift13 (ABF3:MA0930.2:JASPAR) 0.886 0.633 4.300 0.933 0.956 139 230 470 111 105 211.000
; assembly_6 versus ABF3_MA0930.2_JASPAR (ABF3:MA0930.2:JASPAR); m=58/266; ncol2=15; w=0; offset=4; strand=D; shift=13; score= 211; -------------caCGTGtCww ; cor=0.886; Ncor=0.633; logoDP=4.300; NsEucl=0.933; NSW=0.956; rcor=139; rNcor=230; rlogoDP=470; rNsEucl=111; rNSW=105; rank_mean=211.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 1414 5658 143 51 339 420 781 662 3106 2541 c 0 0 0 0 0 0 0 0 0 0 0 0 0 3728 606 8374 51 321 296 368 7781 1283 1700 g 0 0 0 0 0 0 0 0 0 0 0 0 0 1502 908 36 8414 381 7845 1935 60 1779 1589 t 0 0 0 0 0 0 0 0 0 0 0 0 0 1948 1420 39 76 7551 31 5508 89 2424 2762

GLYMA-06G314400_MA1808.1_JASPAR_shift13 (GLYMA-06G314400:MA1808.1:JASPAR) 0.909 0.606 4.263 0.939 0.963 93 320 479 83 80 211.000
; assembly_6 versus GLYMA-06G314400_MA1808.1_JASPAR (GLYMA-06G314400:MA1808.1:JASPAR); m=59/266; ncol2=7; w=0; offset=4; strand=D; shift=13; score= 211; -------------caCGTGG--- ; cor=0.909; Ncor=0.606; logoDP=4.263; NsEucl=0.939; NSW=0.963; rcor=93; rNcor=320; rlogoDP=479; rNsEucl=83; rNSW=80; rank_mean=211.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 4908 18522 1272 745 433 595 1246 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 11920 2293 24345 411 530 357 1261 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 5299 3696 1277 25777 207 26215 21101 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 5706 3322 939 900 26663 666 4225 0 0 0

AT1G01260_M0150_1.02_CISBP_shift12 (AT1G01260:M0150_1.02:CISBP) 0.918 0.525 7.599 0.924 0.954 81 621 75 173 115 213.000
; assembly_6 versus AT1G01260_M0150_1.02_CISBP (AT1G01260:M0150_1.02:CISBP); m=60/266; ncol2=8; w=0; offset=3; strand=D; shift=12; score= 213; ------------sCACGTGk--- ; cor=0.918; Ncor=0.525; logoDP=7.599; NsEucl=0.924; NSW=0.954; rcor=81; rNcor=621; rlogoDP=75; rNsEucl=173; rNSW=115; rank_mean=213.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 6 0 100 0 0 0 0 13 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 28 100 0 100 0 0 0 7 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0 100 0 100 27 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 100 0 53 0 0 0

bHLH74_MA1360.3_JASPAR_shift13 (bHLH74:MA1360.3:JASPAR) 0.999 0.428 7.429 0.968 0.994 2 960 94 11 9 215.200
; assembly_6 versus bHLH74_MA1360.3_JASPAR (bHLH74:MA1360.3:JASPAR); m=61/266; ncol2=8; w=0; offset=4; strand=D; shift=13; score= 215.2; -------------CACGTG---- ; cor=0.999; Ncor=0.428; logoDP=7.429; NsEucl=0.968; NSW=0.994; rcor=2; rNcor=960; rlogoDP=94; rNsEucl=11; rNSW=9; rank_mean=215.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 439 0 3 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 438 0 436 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 436 0 438 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 3 0 439 1 0 0 0 0

BPE_MA1359.3_JASPAR_shift13 (BPE:MA1359.3:JASPAR) 0.999 0.428 7.235 0.971 0.995 1 959 120 7 7 218.800
; assembly_6 versus BPE_MA1359.3_JASPAR (BPE:MA1359.3:JASPAR); m=62/266; ncol2=8; w=0; offset=4; strand=D; shift=13; score= 218.8; -------------CACGTG---- ; cor=0.999; Ncor=0.428; logoDP=7.235; NsEucl=0.971; NSW=0.995; rcor=1; rNcor=959; rlogoDP=120; rNsEucl=7; rNSW=7; rank_mean=218.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 1 396 0 9 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 393 0 388 0 0 2 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 387 0 393 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 396 1 0 0 0 0

GBF1_M0268_1.02_CISBP_shift12 (GBF1:M0268_1.02:CISBP) 0.889 0.635 3.966 0.932 0.954 135 226 519 114 114 221.600
; assembly_6 versus GBF1_M0268_1.02_CISBP (GBF1:M0268_1.02:CISBP); m=63/266; ncol2=9; w=0; offset=3; strand=D; shift=12; score= 221.6; ------------ysACGTGkm-- ; cor=0.889; Ncor=0.635; logoDP=3.966; NsEucl=0.932; NSW=0.954; rcor=135; rNcor=226; rlogoDP=519; rNsEucl=114; rNSW=114; rank_mean=221.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 20 6 86 2 6 2 5 0 28 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 33 32 4 78 14 3 0 5 54 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 7 40 5 11 76 0 95 61 10 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 40 22 5 9 4 95 0 34 8 0 0

O11_MA1816.2_JASPAR_rc_shift13 (O11:MA1816.2:JASPAR_rc) 0.998 0.428 6.962 0.972 0.995 3 961 152 5 5 225.200
; assembly_6 versus O11_MA1816.2_JASPAR_rc (O11:MA1816.2:JASPAR_rc); m=65/266; ncol2=15; w=0; offset=4; strand=R; shift=13; score= 225.2; -------------CACGTG---- ; cor=0.998; Ncor=0.428; logoDP=6.962; NsEucl=0.972; NSW=0.995; rcor=3; rNcor=961; rlogoDP=152; rNsEucl=5; rNSW=5; rank_mean=225.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 25 5440 4 3 8 161 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 5212 12 5435 15 0 61 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 60 0 17 5439 10 5216 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 163 8 4 3 5442 22 0 0 0 0

PIF1_MA0552.2_JASPAR_shift13 (PIF1:MA0552.2:JASPAR) 0.997 0.427 7.023 0.970 0.995 5 966 145 9 8 226.600
; assembly_6 versus PIF1_MA0552.2_JASPAR (PIF1:MA0552.2:JASPAR); m=66/266; ncol2=11; w=0; offset=4; strand=D; shift=13; score= 226.6; -------------CACGTG---- ; cor=0.997; Ncor=0.427; logoDP=7.023; NsEucl=0.970; NSW=0.995; rcor=5; rNcor=966; rlogoDP=145; rNsEucl=9; rNSW=8; rank_mean=226.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 114 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 103 0 113 0 2 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 1 114 0 114 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 112 0 0 0 0 0

BZIP92_B73_1_m1_EEAD0311_EEADannot_rc_shift11 (BZIP92_B73_1_m1:EEAD0311:EEADannot_rc) 0.865 0.618 7.100 0.918 0.932 209 281 137 251 261 227.800
; assembly_6 versus BZIP92_B73_1_m1_EEAD0311_EEADannot_rc (BZIP92_B73_1_m1:EEAD0311:EEADannot_rc); m=67/266; ncol2=8; w=0; offset=2; strand=R; shift=11; score= 227.8; -----------GCCACGTs---- ; cor=0.865; Ncor=0.618; logoDP=7.100; NsEucl=0.918; NSW=0.932; rcor=209; rNcor=281; rlogoDP=137; rNsEucl=251; rNSW=261; rank_mean=227.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 17 0 100 0 2 0 3 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 1 83 100 0 99 1 0 57 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0 0 96 0 40 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 1 1 100 0 0 0 0 0

BHLH72_MA1364.2_JASPAR_rc_shift12 (BHLH72:MA1364.2:JASPAR_rc) 0.980 0.630 1.103 0.963 0.988 22 246 837 18 22 229.000
; assembly_6 versus BHLH72_MA1364.2_JASPAR_rc (BHLH72:MA1364.2:JASPAR_rc); m=68/266; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 229; ------------cCACGTGGs-- ; cor=0.980; Ncor=0.630; logoDP=1.103; NsEucl=0.963; NSW=0.988; rcor=22; rNcor=246; rlogoDP=837; rNsEucl=18; rNSW=22; rank_mean=229.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 18 2 112 0 6 0 0 19 13 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 65 110 0 112 0 0 0 4 66 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 106 0 112 85 29 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 112 0 4 4 0 0

BIM2_MA0965.3_JASPAR_shift13 (BIM2:MA0965.3:JASPAR) 0.998 0.428 6.817 0.972 0.995 4 963 169 6 6 229.600
; assembly_6 versus BIM2_MA0965.3_JASPAR (BIM2:MA0965.3:JASPAR); m=69/266; ncol2=9; w=0; offset=4; strand=D; shift=13; score= 229.6; -------------CACGTG---- ; cor=0.998; Ncor=0.428; logoDP=6.817; NsEucl=0.972; NSW=0.995; rcor=4; rNcor=963; rlogoDP=169; rNsEucl=6; rNSW=6; rank_mean=229.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 28 10091 16 162 84 36 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 10294 36 10174 23 165 20 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 20 166 23 10179 36 10294 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 36 85 165 14 10093 28 0 0 0 0

bZIP28_MA1344.1_JASPAR_shift7 (bZIP28:MA1344.1:JASPAR) 0.818 0.665 6.876 0.927 0.931 408 166 160 142 290 233.200
; assembly_6 versus bZIP28_MA1344.1_JASPAR (bZIP28:MA1344.1:JASPAR); m=71/266; ncol2=15; w=-2; offset=-2; strand=D; shift=7; score= 233.2; -------dwwgrtsACGTGKCa- ; cor=0.818; Ncor=0.665; logoDP=6.876; NsEucl=0.927; NSW=0.931; rcor=408; rNcor=166; rlogoDP=160; rNsEucl=142; rNSW=290; rank_mean=233.200; match_rank= a 0 0 0 0 0 0 0 177 172 138 125 249 127 1 546 0 4 0 6 0 89 302 0 c 0 0 0 0 0 0 0 65 108 90 39 69 79 181 0 544 0 0 0 0 431 42 0 g 0 0 0 0 0 0 0 147 103 91 254 174 3 315 2 0 544 0 542 407 1 118 0 t 0 0 0 0 0 0 0 159 165 229 130 56 339 51 0 4 0 548 0 141 27 86 0

SPT_MA1061.2_JASPAR_shift12 (SPT:MA1061.2:JASPAR) 0.978 0.489 5.291 0.959 0.988 25 761 334 27 20 233.400
; assembly_6 versus SPT_MA1061.2_JASPAR (SPT:MA1061.2:JASPAR); m=72/266; ncol2=15; w=0; offset=3; strand=D; shift=12; score= 233.4; ------------sCACGTG---- ; cor=0.978; Ncor=0.489; logoDP=5.291; NsEucl=0.959; NSW=0.988; rcor=25; rNcor=761; rlogoDP=334; rNsEucl=27; rNSW=20; rank_mean=233.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 47 0 885 9 88 0 84 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 568 961 0 910 0 12 115 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 255 0 99 0 912 0 724 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 129 39 16 80 0 988 76 0 0 0 0

GLYMA-13G317000_MA1811.2_JASPAR_shift14 (GLYMA-13G317000:MA1811.2:JASPAR) 0.948 0.542 4.398 0.944 0.974 42 564 462 58 42 233.600
; assembly_6 versus GLYMA-13G317000_MA1811.2_JASPAR (GLYMA-13G317000:MA1811.2:JASPAR); m=73/266; ncol2=6; w=0; offset=5; strand=D; shift=14; score= 233.6; --------------aCGTGG--- ; cor=0.948; Ncor=0.542; logoDP=4.398; NsEucl=0.944; NSW=0.974; rcor=42; rNcor=564; rlogoDP=462; rNsEucl=58; rNSW=42; rank_mean=233.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12296 660 370 310 434 791 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1390 16694 182 369 269 895 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2539 566 17411 140 17185 13599 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2107 412 369 17513 444 3047 0 0 0

UNE10_M0158_1.02_CISBP_shift12 (UNE10:M0158_1.02:CISBP) 0.909 0.520 7.594 0.920 0.949 94 641 76 227 133 234.200
; assembly_6 versus UNE10_M0158_1.02_CISBP (UNE10:M0158_1.02:CISBP); m=74/266; ncol2=11; w=0; offset=3; strand=D; shift=12; score= 234.2; ------------cCACGTGm--- ; cor=0.909; Ncor=0.520; logoDP=7.594; NsEucl=0.920; NSW=0.949; rcor=94; rNcor=641; rlogoDP=76; rNsEucl=227; rNSW=133; rank_mean=234.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 21 0 100 0 0 0 0 27 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 50 100 0 100 0 0 0 53 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 100 0 100 7 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 100 0 13 0 0 0

UNE10_MA1074.1_JASPAR_shift12 (UNE10:MA1074.1:JASPAR) 0.909 0.519 7.594 0.920 0.949 95 642 77 228 135 235.400
; assembly_6 versus UNE10_MA1074.1_JASPAR (UNE10:MA1074.1:JASPAR); m=75/266; ncol2=11; w=0; offset=3; strand=D; shift=12; score= 235.4; ------------cCACGTGm--- ; cor=0.909; Ncor=0.519; logoDP=7.594; NsEucl=0.920; NSW=0.949; rcor=95; rNcor=642; rlogoDP=77; rNsEucl=228; rNSW=135; rank_mean=235.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 214 0 999 0 0 0 0 267 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 499 999 0 999 0 0 0 533 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 72 0 0 0 999 0 999 67 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 214 0 0 0 0 999 0 134 0 0 0

SPT_M0162_1.02_CISBP_shift11 (SPT:M0162_1.02:CISBP) 0.893 0.574 5.272 0.926 0.951 128 446 340 144 124 236.400
; assembly_6 versus SPT_M0162_1.02_CISBP (SPT:M0162_1.02:CISBP); m=76/266; ncol2=17; w=0; offset=2; strand=D; shift=11; score= 236.4; -----------csCACGTGc--- ; cor=0.893; Ncor=0.574; logoDP=5.272; NsEucl=0.926; NSW=0.951; rcor=128; rNcor=446; rlogoDP=340; rNsEucl=144; rNSW=124; rank_mean=236.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 20 5 0 88 1 9 0 8 22 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 43 57 96 0 91 0 1 12 30 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 21 26 0 10 0 91 0 72 24 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 16 12 4 2 8 0 99 8 24 0 0 0

At5g46760_MA0568.1_JASPAR_shift12 (At5g46760:MA0568.1:JASPAR) 0.919 0.525 5.518 0.930 0.960 80 620 292 128 86 241.200
; assembly_6 versus At5g46760_MA0568.1_JASPAR (At5g46760:MA0568.1:JASPAR); m=77/266; ncol2=12; w=0; offset=3; strand=D; shift=12; score= 241.2; ------------vCACGTGb--- ; cor=0.919; Ncor=0.525; logoDP=5.518; NsEucl=0.930; NSW=0.960; rcor=80; rNcor=620; rlogoDP=292; rNsEucl=128; rNSW=86; rank_mean=241.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 25 10 97 0 16 1 0 7 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 28 89 0 84 0 2 0 40 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 40 0 2 0 84 0 89 28 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 7 0 1 16 0 97 10 25 0 0 0

PACE_EEAD0576_EEADannot_rc_shift8 (PACE:EEAD0576:EEADannot_rc) 0.871 0.813 1.542 0.938 0.946 186 19 787 88 147 245.400
; assembly_6 versus PACE_EEAD0576_EEADannot_rc (PACE:EEAD0576:EEADannot_rc); m=78/266; ncol2=8; w=-1; offset=-1; strand=R; shift=8; score= 245.4; --------wkyGCCAC------- ; cor=0.871; Ncor=0.813; logoDP=1.542; NsEucl=0.938; NSW=0.946; rcor=186; rNcor=19; rlogoDP=787; rNsEucl=88; rNSW=147; rank_mean=245.400; match_rank= a 0 0 0 0 0 0 0 0 9 3 2 0 3 0 26 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 6 3 17 0 23 26 0 21 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 1 9 0 25 0 0 0 1 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 10 11 7 1 0 0 0 4 0 0 0 0 0 0 0

NFYC2_UN0690.1_JASPAR_rc_shift8 (NFYC2:UN0690.1:JASPAR_rc) 0.935 0.624 1.217 0.948 0.973 56 269 817 43 46 246.200
; assembly_6 versus NFYC2_UN0690.1_JASPAR_rc (NFYC2:UN0690.1:JASPAR_rc); m=79/266; ncol2=6; w=-1; offset=-1; strand=R; shift=8; score= 246.2; --------wwTGCC--------- ; cor=0.935; Ncor=0.624; logoDP=1.217; NsEucl=0.948; NSW=0.973; rcor=56; rNcor=269; rlogoDP=817; rNsEucl=43; rNSW=46; rank_mean=246.200; match_rank= a 0 0 0 0 0 0 0 0 1365 1384 431 110 903 86 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 876 948 508 174 3438 4421 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 966 882 184 4053 103 53 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 1473 1466 3557 343 236 120 0 0 0 0 0 0 0 0 0

PIF4_MA0561.1_JASPAR_rc_shift11 (PIF4:MA0561.1:JASPAR_rc) 0.979 0.559 2.839 0.960 0.988 23 506 668 24 23 248.800
; assembly_6 versus PIF4_MA0561.1_JASPAR_rc (PIF4:MA0561.1:JASPAR_rc); m=80/266; ncol2=8; w=0; offset=2; strand=R; shift=11; score= 248.8; -----------gsCACGTG---- ; cor=0.979; Ncor=0.559; logoDP=2.839; NsEucl=0.960; NSW=0.988; rcor=23; rNcor=506; rlogoDP=668; rNsEucl=24; rNSW=23; rank_mean=248.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 53 0 335 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 65 183 335 0 286 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 206 99 0 0 0 335 0 335 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0 49 0 335 0 0 0 0 0

BZIP28_MA1344.2_JASPAR_shift12 (BZIP28:MA1344.2:JASPAR) 0.855 0.611 6.849 0.917 0.931 243 305 162 260 276 249.200
; assembly_6 versus BZIP28_MA1344.2_JASPAR (BZIP28:MA1344.2:JASPAR); m=81/266; ncol2=7; w=0; offset=3; strand=D; shift=12; score= 249.2; ------------tsACGTG---- ; cor=0.855; Ncor=0.611; logoDP=6.849; NsEucl=0.917; NSW=0.931; rcor=243; rNcor=305; rlogoDP=162; rNsEucl=260; rNSW=276; rank_mean=249.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 127 1 546 0 4 0 6 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 79 181 0 544 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 3 315 2 0 544 0 542 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 339 51 0 4 0 548 0 0 0 0 0

ABF1_ABF1_Athamap_shift12 (ABF1:ABF1:Athamap) 0.897 0.577 8.409 0.911 0.929 117 434 29 360 307 249.400
; assembly_6 versus ABF1_ABF1_Athamap (ABF1:ABF1:Athamap); m=82/266; ncol2=11; w=0; offset=3; strand=D; shift=12; score= 249.4; ------------ACACGTGGC-- ; cor=0.897; Ncor=0.577; logoDP=8.409; NsEucl=0.911; NSW=0.929; rcor=117; rNcor=434; rlogoDP=29; rNsEucl=360; rNSW=307; rank_mean=249.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 20 0 20 0 0 0 0 0 1 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 20 0 0 0 0 19 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 20 17 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 3 0 0 0

NF-YB9_UN0822.1_JASPAR_rc_shift13 (NF-YB9:UN0822.1:JASPAR_rc) 0.991 0.425 5.866 0.968 0.994 10 979 244 13 10 251.200
; assembly_6 versus NF-YB9_UN0822.1_JASPAR_rc (NF-YB9:UN0822.1:JASPAR_rc); m=83/266; ncol2=15; w=0; offset=4; strand=R; shift=13; score= 251.2; -------------CACGTG---- ; cor=0.991; Ncor=0.425; logoDP=5.866; NsEucl=0.968; NSW=0.994; rcor=10; rNcor=979; rlogoDP=244; rNsEucl=13; rNSW=10; rank_mean=251.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 20 8402 0 32 352 319 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 9256 66 9578 0 793 4 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 6 795 0 9581 54 9270 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 331 350 35 0 8414 20 0 0 0 0

bHLH69_MA1363.1_JASPAR_shift4 (bHLH69:MA1363.1:JASPAR) 0.896 0.472 7.344 0.931 0.953 120 822 107 120 120 257.800
; assembly_6 versus bHLH69_MA1363.1_JASPAR (bHLH69:MA1363.1:JASPAR); m=84/266; ncol2=6; w=-5; offset=-5; strand=D; shift=4; score= 257.8; ----CgTGyk------------- ; cor=0.896; Ncor=0.472; logoDP=7.344; NsEucl=0.931; NSW=0.953; rcor=120; rNcor=822; rlogoDP=107; rNsEucl=120; rNSW=120; rank_mean=257.800; match_rank= a 0 0 0 0 1 6 3 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 27 1 2 1 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 5 23 5 25 8 13 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 1 4 24 3 11 16 0 0 0 0 0 0 0 0 0 0 0 0 0

GBF3.ampDAP_M0192_AthalianaCistrome_rc_shift10 (GBF3.ampDAP:M0192:AthalianaCistrome_rc) 0.880 0.715 0.785 0.942 0.957 154 78 891 67 99 257.800
; assembly_6 versus GBF3.ampDAP_M0192_AthalianaCistrome_rc (GBF3.ampDAP:M0192:AthalianaCistrome_rc); m=85/266; ncol2=6; w=0; offset=1; strand=R; shift=10; score= 257.8; ----------tGMCAC------- ; cor=0.880; Ncor=0.715; logoDP=0.785; NsEucl=0.942; NSW=0.957; rcor=154; rNcor=78; rlogoDP=891; rNsEucl=67; rNSW=99; rank_mean=257.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 96 21 142 0 535 7 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 120 2 390 536 1 505 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 53 386 4 0 0 10 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 267 127 0 0 0 14 0 0 0 0 0 0 0

MYC3_MA0568.2_JASPAR_shift13 (MYC3:MA0568.2:JASPAR) 0.993 0.426 5.482 0.975 0.996 9 976 298 4 4 258.200
; assembly_6 versus MYC3_MA0568.2_JASPAR (MYC3:MA0568.2:JASPAR); m=86/266; ncol2=8; w=0; offset=4; strand=D; shift=13; score= 258.2; -------------CACGTG---- ; cor=0.993; Ncor=0.426; logoDP=5.482; NsEucl=0.975; NSW=0.996; rcor=9; rNcor=976; rlogoDP=298; rNsEucl=4; rNSW=4; rank_mean=258.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 10 97 0 16 1 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 89 0 84 0 2 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 84 0 89 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 0 97 10 0 0 0 0

GBF3_MA1351.2_JASPAR_rc_shift8 (GBF3:MA1351.2:JASPAR_rc) 0.925 0.616 1.163 0.944 0.968 72 286 828 55 60 260.200
; assembly_6 versus GBF3_MA1351.2_JASPAR_rc (GBF3:MA1351.2:JASPAR_rc); m=88/266; ncol2=6; w=-1; offset=-1; strand=R; shift=8; score= 260.2; --------wwTGCC--------- ; cor=0.925; Ncor=0.616; logoDP=1.163; NsEucl=0.944; NSW=0.968; rcor=72; rNcor=286; rlogoDP=828; rNsEucl=55; rNSW=60; rank_mean=260.200; match_rank= a 0 0 0 0 0 0 0 0 2745 2883 801 228 1454 131 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 1879 1943 831 275 7410 9137 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 1909 1756 400 8130 212 60 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 2928 2879 7429 828 385 133 0 0 0 0 0 0 0 0 0

LOC_Os02g49560_M0327_1.02_CISBP_rc_shift11 (LOC_Os02g49560:M0327_1.02:CISBP_rc) 0.902 0.708 0.574 0.939 0.960 109 97 930 82 91 261.800
; assembly_6 versus LOC_Os02g49560_M0327_1.02_CISBP_rc (LOC_Os02g49560:M0327_1.02:CISBP_rc); m=89/266; ncol2=19; w=0; offset=2; strand=R; shift=11; score= 261.8; -----------rwCACGTGgma- ; cor=0.902; Ncor=0.708; logoDP=0.574; NsEucl=0.939; NSW=0.960; rcor=109; rNcor=97; rlogoDP=930; rNsEucl=82; rNSW=91; rank_mean=261.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 29 47 2 100 0 0 0 0 12 25 33 0 c 0 0 0 0 0 0 0 0 0 0 0 21 19 73 0 100 0 0 7 4 39 22 0 g 0 0 0 0 0 0 0 0 0 0 0 29 7 22 0 0 100 0 93 64 18 23 0 t 0 0 0 0 0 0 0 0 0 0 0 21 27 3 0 0 0 100 0 20 18 22 0

bHLH18_MA1361.1_JASPAR_shift4 (bHLH18:MA1361.1:JASPAR) 0.852 0.538 6.450 0.931 0.943 252 577 200 119 165 262.600
; assembly_6 versus bHLH18_MA1361.1_JASPAR (bHLH18:MA1361.1:JASPAR); m=90/266; ncol2=15; w=-5; offset=-5; strand=D; shift=4; score= 262.6; ----crYGtkwwhCACGTG---- ; cor=0.852; Ncor=0.538; logoDP=6.450; NsEucl=0.931; NSW=0.943; rcor=252; rNcor=577; rlogoDP=200; rNsEucl=119; rNSW=165; rank_mean=262.600; match_rank= a 0 0 0 0 34 109 0 38 28 12 60 55 61 11 193 0 9 7 0 0 0 0 0 c 0 0 0 0 128 2 143 4 32 13 15 27 61 190 0 199 0 3 0 0 0 0 0 g 0 0 0 0 20 58 7 153 8 116 29 31 15 0 4 0 192 0 197 0 0 0 0 t 0 0 0 0 19 32 51 6 133 60 97 88 64 0 4 2 0 191 4 0 0 0 0

ABF1_MA0570.2_JASPAR_rc_shift8 (ABF1:MA0570.2:JASPAR_rc) 0.927 0.680 0.284 0.946 0.968 65 132 1012 47 65 264.200
; assembly_6 versus ABF1_MA0570.2_JASPAR_rc (ABF1:MA0570.2:JASPAR_rc); m=91/266; ncol2=9; w=-1; offset=-1; strand=R; shift=8; score= 264.2; --------wwTGmCACG------ ; cor=0.927; Ncor=0.680; logoDP=0.284; NsEucl=0.946; NSW=0.968; rcor=65; rNcor=132; rlogoDP=1012; rNsEucl=47; rNSW=65; rank_mean=264.200; match_rank= a 0 0 0 0 0 0 0 0 345 364 79 33 384 6 1128 9 17 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 225 234 117 28 707 1123 1 1107 15 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 213 195 36 999 11 3 8 9 1099 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 358 348 909 81 39 9 4 16 10 0 0 0 0 0 0

LEC1-A_UN0422.2_JASPAR_shift14 (LEC1-A:UN0422.2:JASPAR) 0.934 0.534 3.824 0.939 0.970 58 588 541 85 56 265.600
; assembly_6 versus LEC1-A_UN0422.2_JASPAR (LEC1-A:UN0422.2:JASPAR); m=92/266; ncol2=15; w=0; offset=5; strand=D; shift=14; score= 265.6; --------------aCGTGGCA- ; cor=0.934; Ncor=0.534; logoDP=3.824; NsEucl=0.939; NSW=0.970; rcor=58; rNcor=588; rlogoDP=541; rNsEucl=85; rNSW=56; rank_mean=265.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9508 942 609 452 567 892 1110 12833 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1783 14394 207 435 401 820 14415 887 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2775 501 15158 174 15073 12672 672 1497 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2477 706 569 15482 502 2159 346 1326 0

URI_MA2342.1_JASPAR_shift13 (URI:MA2342.1:JASPAR) 0.997 0.427 5.166 0.982 0.998 6 967 354 1 1 265.800
; assembly_6 versus URI_MA2342.1_JASPAR (URI:MA2342.1:JASPAR); m=93/266; ncol2=15; w=0; offset=4; strand=D; shift=13; score= 265.8; -------------CACGTG---- ; cor=0.997; Ncor=0.427; logoDP=5.166; NsEucl=0.982; NSW=0.998; rcor=6; rNcor=967; rlogoDP=354; rNsEucl=1; rNSW=1; rank_mean=265.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 51 1660 30 96 60 34 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 1731 11 1714 10 121 34 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 34 118 10 1714 11 1731 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 34 61 96 30 1658 51 0 0 0 0

gw1.270.82.1_M0252_1.02_CISBP_shift12 (gw1.270.82.1:M0252_1.02:CISBP) 0.898 0.513 7.380 0.916 0.943 115 671 102 280 163 266.200
; assembly_6 versus gw1.270.82.1_M0252_1.02_CISBP (gw1.270.82.1:M0252_1.02:CISBP); m=94/266; ncol2=15; w=0; offset=3; strand=D; shift=12; score= 266.2; ------------cCACGTGc--- ; cor=0.898; Ncor=0.513; logoDP=7.380; NsEucl=0.916; NSW=0.943; rcor=115; rNcor=671; rlogoDP=102; rNsEucl=280; rNSW=163; rank_mean=266.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 15 0 100 0 5 0 0 14 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 46 100 0 100 0 0 0 64 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 95 0 100 8 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 100 0 14 0 0 0

GBF1_MA2389.1_JASPAR_shift14 (GBF1:MA2389.1:JASPAR) 0.981 0.491 3.907 0.961 0.989 20 750 527 21 16 266.800
; assembly_6 versus GBF1_MA2389.1_JASPAR (GBF1:MA2389.1:JASPAR); m=95/266; ncol2=11; w=0; offset=5; strand=D; shift=14; score= 266.8; --------------ACGTGkm-- ; cor=0.981; Ncor=0.491; logoDP=3.907; NsEucl=0.961; NSW=0.989; rcor=20; rNcor=750; rlogoDP=527; rNsEucl=21; rNSW=16; rank_mean=266.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 863 16 57 20 45 0 279 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 783 135 26 2 51 535 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54 111 756 4 954 610 102 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47 89 49 948 0 338 81 0 0

GLYMA-13G317000_MA1811.1_JASPAR_rc_shift8 (GLYMA-13G317000:MA1811.1:JASPAR_rc) 0.916 0.610 1.236 0.941 0.966 83 306 812 71 72 268.800
; assembly_6 versus GLYMA-13G317000_MA1811.1_JASPAR_rc (GLYMA-13G317000:MA1811.1:JASPAR_rc); m=96/266; ncol2=8; w=-1; offset=-1; strand=R; shift=8; score= 268.8; --------wrTGCCAC------- ; cor=0.916; Ncor=0.610; logoDP=1.236; NsEucl=0.941; NSW=0.966; rcor=83; rNcor=306; rlogoDP=812; rNsEucl=71; rNSW=72; rank_mean=268.800; match_rank= a 0 0 0 0 0 0 0 0 4757 4848 1331 379 3047 444 17513 369 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 4336 4253 1636 626 13599 17185 140 17411 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 4354 4702 966 16137 895 269 369 182 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 4885 4529 14399 1190 791 434 310 370 0 0 0 0 0 0 0

AREB3.ampDAP_M0218_AthalianaCistrome_rc_shift10 (AREB3.ampDAP:M0218:AthalianaCistrome_rc) 0.874 0.710 1.060 0.935 0.945 173 92 841 102 151 271.800
; assembly_6 versus AREB3.ampDAP_M0218_AthalianaCistrome_rc (AREB3.ampDAP:M0218:AthalianaCistrome_rc); m=97/266; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 271.8; ----------TGMCACGTswc-- ; cor=0.874; Ncor=0.710; logoDP=1.060; NsEucl=0.935; NSW=0.945; rcor=173; rNcor=92; rlogoDP=841; rNsEucl=102; rNSW=151; rank_mean=271.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 23 0 168 0 593 0 0 0 10 238 32 0 0 c 0 0 0 0 0 0 0 0 0 0 57 0 425 593 0 593 1 0 227 0 352 0 0 g 0 0 0 0 0 0 0 0 0 0 39 590 0 0 0 0 592 0 356 83 79 0 0 t 0 0 0 0 0 0 0 0 0 0 474 3 0 0 0 0 0 593 0 272 130 0 0

SPCH_UN0823.1_JASPAR_rc_shift13 (SPCH:UN0823.1:JASPAR_rc) 0.986 0.423 5.350 0.963 0.992 15 994 320 19 13 272.200
; assembly_6 versus SPCH_UN0823.1_JASPAR_rc (SPCH:UN0823.1:JASPAR_rc); m=98/266; ncol2=11; w=0; offset=4; strand=R; shift=13; score= 272.2; -------------CACGTG---- ; cor=0.986; Ncor=0.423; logoDP=5.350; NsEucl=0.963; NSW=0.992; rcor=15; rNcor=994; rlogoDP=320; rNsEucl=19; rNSW=13; rank_mean=272.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 46 8075 8 40 655 441 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 9277 104 9763 2 965 32 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 34 978 2 9763 99 9301 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 456 656 40 8 8094 39 0 0 0 0

PHYPADRAFT_143875_MA0988.2_JASPAR_shift13 (PHYPADRAFT_143875:MA0988.2:JASPAR) 0.996 0.427 5.046 0.980 0.998 7 969 382 2 2 272.400
; assembly_6 versus PHYPADRAFT_143875_MA0988.2_JASPAR (PHYPADRAFT_143875:MA0988.2:JASPAR); m=99/266; ncol2=7; w=0; offset=4; strand=D; shift=13; score= 272.4; -------------CACGTG---- ; cor=0.996; Ncor=0.427; logoDP=5.046; NsEucl=0.980; NSW=0.998; rcor=7; rNcor=969; rlogoDP=382; rNsEucl=2; rNSW=2; rank_mean=272.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 106 923 22 39 66 38 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 844 0 940 0 10 12 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 12 10 0 940 0 844 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 38 66 39 22 923 106 0 0 0 0

PHYPADRAFT_48267_MA1021.1_JASPAR_shift12 (PHYPADRAFT_48267:MA1021.1:JASPAR) 0.897 0.513 7.229 0.916 0.943 119 672 121 287 168 273.400
; assembly_6 versus PHYPADRAFT_48267_MA1021.1_JASPAR (PHYPADRAFT_48267:MA1021.1:JASPAR); m=100/266; ncol2=12; w=0; offset=3; strand=D; shift=12; score= 273.4; ------------cCACGTGc--- ; cor=0.897; Ncor=0.513; logoDP=7.229; NsEucl=0.916; NSW=0.943; rcor=119; rNcor=672; rlogoDP=121; rNsEucl=287; rNSW=168; rank_mean=273.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 154 1 998 1 53 1 1 143 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 461 998 1 998 1 1 1 642 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 154 1 1 1 946 1 998 72 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 231 1 1 1 1 998 1 143 0 0 0

0300010311_M0363_1.02_CISBP_shift11 (0300010311:M0363_1.02:CISBP) 0.821 0.645 6.316 0.919 0.928 396 208 206 242 321 274.600
; assembly_6 versus 0300010311_M0363_1.02_CISBP (0300010311:M0363_1.02:CISBP); m=101/266; ncol2=18; w=0; offset=2; strand=D; shift=11; score= 274.6; -----------rtsACGTGgca- ; cor=0.821; Ncor=0.645; logoDP=6.316; NsEucl=0.919; NSW=0.928; rcor=396; rNcor=208; rlogoDP=206; rNsEucl=242; rNSW=321; rank_mean=274.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 29 23 3 100 0 0 0 0 13 19 34 0 c 0 0 0 0 0 0 0 0 0 0 0 21 13 38 0 100 0 0 10 4 41 22 0 g 0 0 0 0 0 0 0 0 0 0 0 29 6 56 0 0 100 0 90 60 20 22 0 t 0 0 0 0 0 0 0 0 0 0 0 21 58 3 0 0 0 100 0 23 20 22 0

BIM3_MA0966.2_JASPAR_shift13 (BIM3:MA0966.2:JASPAR) 0.996 0.427 4.938 0.979 0.997 8 970 400 3 3 276.800
; assembly_6 versus BIM3_MA0966.2_JASPAR (BIM3:MA0966.2:JASPAR); m=102/266; ncol2=8; w=0; offset=4; strand=D; shift=13; score= 276.8; -------------CACGTG---- ; cor=0.996; Ncor=0.427; logoDP=4.938; NsEucl=0.979; NSW=0.997; rcor=8; rNcor=970; rlogoDP=400; rNsEucl=3; rNSW=3; rank_mean=276.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 74 942 15 67 33 96 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 821 0 918 0 25 8 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 8 25 0 918 0 821 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 96 33 67 15 942 74 0 0 0 0

BIM2.ampDAP_M0156_AthalianaCistrome_shift0 (BIM2.ampDAP:M0156:AthalianaCistrome) 0.924 0.402 7.148 0.942 0.967 74 1077 133 68 68 284.000
; assembly_6 versus BIM2.ampDAP_M0156_AthalianaCistrome (BIM2.ampDAP:M0156:AthalianaCistrome); m=103/266; ncol2=17; w=-9; offset=-9; strand=D; shift=0; score= 284; rsmrsgtgwrwgkCACG------ ; cor=0.924; Ncor=0.402; logoDP=7.148; NsEucl=0.942; NSW=0.967; rcor=74; rNcor=1077; rlogoDP=133; rNsEucl=68; rNSW=68; rank_mean=284.000; match_rank= a 164 123 168 216 80 133 81 124 167 190 150 136 115 0 581 0 23 0 0 0 0 0 0 c 93 183 197 111 248 75 139 92 146 87 110 96 70 584 0 583 0 0 0 0 0 0 0 g 189 167 94 148 162 286 124 284 113 177 127 291 218 0 4 0 562 0 0 0 0 0 0 t 139 112 126 110 95 91 241 85 159 131 198 62 182 1 0 2 0 0 0 0 0 0 0

BZIP96_Mo17_1_EEAD0316_EEADannot_shift10 (BZIP96_Mo17_1:EEAD0316:EEADannot) 0.802 0.652 6.438 0.923 0.924 494 188 201 182 375 288.000
; assembly_6 versus BZIP96_Mo17_1_EEAD0316_EEADannot (BZIP96_Mo17_1:EEAD0316:EEADannot); m=104/266; ncol2=11; w=0; offset=1; strand=D; shift=10; score= 288; ----------tGCCACGTsay-- ; cor=0.802; Ncor=0.652; logoDP=6.438; NsEucl=0.923; NSW=0.924; rcor=494; rNcor=188; rlogoDP=201; rNsEucl=182; rNSW=375; rank_mean=288.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 5 1 24 0 100 0 4 0 7 59 9 0 0 c 0 0 0 0 0 0 0 0 0 0 20 1 76 100 0 95 8 1 61 3 40 0 0 g 0 0 0 0 0 0 0 0 0 0 19 90 0 0 0 1 88 0 32 17 20 0 0 t 0 0 0 0 0 0 0 0 0 0 56 8 0 0 0 4 0 99 0 21 31 0 0

GBF2_MA1672.2_JASPAR_rc_shift10 (GBF2:MA1672.2:JASPAR_rc) 0.926 0.595 1.013 0.938 0.966 69 367 849 86 70 288.200
; assembly_6 versus GBF2_MA1672.2_JASPAR_rc (GBF2:MA1672.2:JASPAR_rc); m=105/266; ncol2=15; w=0; offset=1; strand=R; shift=10; score= 288.2; ----------TGCCACGTs---- ; cor=0.926; Ncor=0.595; logoDP=1.013; NsEucl=0.938; NSW=0.966; rcor=69; rNcor=367; rlogoDP=849; rNsEucl=86; rNSW=70; rank_mean=288.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 877 359 1408 112 7491 221 356 197 954 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 891 282 6028 7553 77 7275 221 145 3420 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 596 6254 153 83 127 107 7122 101 2988 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 5558 1027 333 174 227 319 223 7479 560 0 0 0 0

bHLH18_MA1361.2_JASPAR_shift4 (bHLH18:MA1361.2:JASPAR) 0.885 0.466 6.430 0.930 0.950 145 838 202 129 130 288.800
; assembly_6 versus bHLH18_MA1361.2_JASPAR (bHLH18:MA1361.2:JASPAR); m=106/266; ncol2=10; w=-5; offset=-5; strand=D; shift=4; score= 288.8; ----crYGtkwwhC--------- ; cor=0.885; Ncor=0.466; logoDP=6.430; NsEucl=0.930; NSW=0.950; rcor=145; rNcor=838; rlogoDP=202; rNsEucl=129; rNSW=130; rank_mean=288.800; match_rank= a 0 0 0 0 34 109 0 38 28 12 60 55 61 11 0 0 0 0 0 0 0 0 0 c 0 0 0 0 128 2 143 4 32 13 15 27 61 190 0 0 0 0 0 0 0 0 0 g 0 0 0 0 20 58 7 153 8 116 29 31 15 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 19 32 51 6 133 60 97 88 64 0 0 0 0 0 0 0 0 0 0

bZIP16_MA1349.1_JASPAR_rc_shift10 (bZIP16:MA1349.1:JASPAR_rc) 0.865 0.703 1.006 0.933 0.942 210 105 853 109 170 289.400
; assembly_6 versus bZIP16_MA1349.1_JASPAR_rc (bZIP16:MA1349.1:JASPAR_rc); m=107/266; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 289.4; ----------TGCCACGTsrs-- ; cor=0.865; Ncor=0.703; logoDP=1.006; NsEucl=0.933; NSW=0.942; rcor=210; rNcor=105; rlogoDP=853; rNsEucl=109; rNSW=170; rank_mean=289.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 14 0 65 0 594 0 1 0 27 279 69 0 0 c 0 0 0 0 0 0 0 0 0 0 94 0 529 594 0 587 7 0 265 0 254 0 0 g 0 0 0 0 0 0 0 0 0 0 22 561 0 0 0 7 586 0 302 170 174 0 0 t 0 0 0 0 0 0 0 0 0 0 464 33 0 0 0 0 0 594 0 145 97 0 0

bZIP2_1_EEAD0096_EEADannot_rc_shift10 (bZIP2_1:EEAD0096:EEADannot_rc) 0.860 0.699 0.951 0.935 0.945 222 108 866 103 156 291.000
; assembly_6 versus bZIP2_1_EEAD0096_EEADannot_rc (bZIP2_1:EEAD0096:EEADannot_rc); m=108/266; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 291; ----------TGCCACGTsw--- ; cor=0.860; Ncor=0.699; logoDP=0.951; NsEucl=0.935; NSW=0.945; rcor=222; rNcor=108; rlogoDP=866; rNsEucl=103; rNSW=156; rank_mean=291.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 68 3 233 0 999 2 2 0 69 481 0 0 0 c 0 0 0 0 0 0 0 0 0 0 179 0 767 1000 0 991 0 0 456 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 64 871 0 0 0 6 998 0 475 235 0 0 0 t 0 0 0 0 0 0 0 0 0 0 689 126 0 0 1 1 0 1000 0 284 0 0 0

LEC1-A_UN0422.1_JASPAR_rc_shift8 (LEC1-A:UN0422.1:JASPAR_rc) 0.901 0.600 1.168 0.937 0.961 112 350 825 89 84 292.000
; assembly_6 versus LEC1-A_UN0422.1_JASPAR_rc (LEC1-A:UN0422.1:JASPAR_rc); m=109/266; ncol2=14; w=-1; offset=-1; strand=R; shift=8; score= 292; --------wrTGCCACGtg---- ; cor=0.901; Ncor=0.600; logoDP=1.168; NsEucl=0.937; NSW=0.961; rcor=112; rNcor=350; rlogoDP=825; rNsEucl=89; rNSW=84; rank_mean=292.000; match_rank= a 0 0 0 0 0 0 0 0 4538 4440 1326 346 2159 502 15482 569 706 2477 3467 0 0 0 0 c 0 0 0 0 0 0 0 0 3775 3848 1497 672 12672 15073 174 15158 501 2775 2759 0 0 0 0 g 0 0 0 0 0 0 0 0 3805 4154 887 14415 820 401 435 207 14394 1783 7023 0 0 0 0 t 0 0 0 0 0 0 0 0 4425 4101 12833 1110 892 567 452 609 942 9508 3294 0 0 0 0

At3g59060_MA0562.1_JASPAR_rc_shift12 (At3g59060:MA0562.1:JASPAR_rc) 0.890 0.508 7.051 0.913 0.939 134 690 140 331 194 297.800
; assembly_6 versus At3g59060_MA0562.1_JASPAR_rc (At3g59060:MA0562.1:JASPAR_rc); m=110/266; ncol2=11; w=0; offset=3; strand=R; shift=12; score= 297.8; ------------sCAYGTGR--- ; cor=0.890; Ncor=0.508; logoDP=7.051; NsEucl=0.913; NSW=0.939; rcor=134; rNcor=690; rlogoDP=140; rNsEucl=331; rNSW=194; rank_mean=297.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 30 0 286 0 0 0 0 208 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 161 286 0 195 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0 286 0 286 78 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 91 0 286 0 0 0 0 0

BZIP92_Mo17_1_EEAD0312_EEADannot_shift11 (BZIP92_Mo17_1:EEAD0312:EEADannot) 0.823 0.647 7.168 0.913 0.917 376 198 130 332 456 298.400
; assembly_6 versus BZIP92_Mo17_1_EEAD0312_EEADannot (BZIP92_Mo17_1:EEAD0312:EEADannot); m=111/266; ncol2=6; w=0; offset=2; strand=D; shift=11; score= 298.4; -----------GCCACG------ ; cor=0.823; Ncor=0.647; logoDP=7.168; NsEucl=0.913; NSW=0.917; rcor=376; rNcor=198; rlogoDP=130; rNsEucl=332; rNSW=456; rank_mean=298.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 22 0 100 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 78 100 0 99 2 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 94 0 0 0 0 98 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 1 0 0 0 0 0 0 0

BHLH168_ZmSPT2_Mo17_1_EEAD0221_EEADannot_rc_shift10 (BHLH168_ZmSPT2_Mo17_1:EEAD0221:EEADannot_rc) 0.869 0.683 1.886 0.923 0.935 192 130 758 187 243 302.000
; assembly_6 versus BHLH168_ZmSPT2_Mo17_1_EEAD0221_EEADannot_rc (BHLH168_ZmSPT2_Mo17_1:EEAD0221:EEADannot_rc); m=112/266; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 302; ----------gCCCACGTGg--- ; cor=0.869; Ncor=0.683; logoDP=1.886; NsEucl=0.923; NSW=0.935; rcor=192; rNcor=130; rlogoDP=758; rNsEucl=187; rNSW=243; rank_mean=302.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 21 4 1 0 100 0 5 0 0 11 0 0 0 c 0 0 0 0 0 0 0 0 0 0 14 79 96 100 0 99 0 1 0 20 0 0 0 g 0 0 0 0 0 0 0 0 0 0 57 9 3 0 0 0 95 0 100 55 0 0 0 t 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 1 0 99 0 14 0 0 0

UNE10_MA1074.2_JASPAR_shift13 (UNE10:MA1074.2:JASPAR) 0.915 0.457 7.554 0.912 0.946 87 859 84 342 143 303.000
; assembly_6 versus UNE10_MA1074.2_JASPAR (UNE10:MA1074.2:JASPAR); m=113/266; ncol2=7; w=0; offset=4; strand=D; shift=13; score= 303; -------------CACGTGm--- ; cor=0.915; Ncor=0.457; logoDP=7.554; NsEucl=0.912; NSW=0.946; rcor=87; rNcor=859; rlogoDP=84; rNsEucl=342; rNSW=143; rank_mean=303.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 999 0 0 0 0 267 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 999 0 999 0 0 0 533 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 999 0 999 67 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 999 0 134 0 0 0

HYH_MA1425.1_JASPAR_rc_shift10 (HYH:MA1425.1:JASPAR_rc) 0.790 0.677 5.793 0.920 0.924 551 136 253 220 369 305.800
; assembly_6 versus HYH_MA1425.1_JASPAR_rc (HYH:MA1425.1:JASPAR_rc); m=114/266; ncol2=15; w=0; offset=1; strand=R; shift=10; score= 305.8; ----------tgmCACGTswyc- ; cor=0.790; Ncor=0.677; logoDP=5.793; NsEucl=0.920; NSW=0.924; rcor=551; rNcor=136; rlogoDP=253; rNsEucl=220; rNSW=369; rank_mean=305.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 226 177 306 48 999 0 0 0 102 571 152 201 0 c 0 0 0 0 0 0 0 0 0 0 226 177 392 747 0 999 0 0 523 72 321 396 0 g 0 0 0 0 0 0 0 0 0 0 226 466 97 154 0 0 999 0 350 72 152 201 0 t 0 0 0 0 0 0 0 0 0 0 321 177 203 48 0 0 0 999 23 283 372 201 0

ABI5.DAP_M0201_AthalianaCistrome_rc_shift8 (ABI5.DAP:M0201:AthalianaCistrome_rc) 0.843 0.656 1.922 0.934 0.939 287 179 755 108 201 306.000
; assembly_6 versus ABI5.DAP_M0201_AthalianaCistrome_rc (ABI5.DAP:M0201:AthalianaCistrome_rc); m=115/266; ncol2=7; w=-1; offset=-1; strand=R; shift=8; score= 306; --------wytGMCA-------- ; cor=0.843; Ncor=0.656; logoDP=1.922; NsEucl=0.934; NSW=0.939; rcor=287; rNcor=179; rlogoDP=755; rNsEucl=108; rNSW=201; rank_mean=306.000; match_rank= a 0 0 0 0 0 0 0 0 201 146 28 0 149 0 595 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 87 174 123 0 446 595 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 117 124 50 568 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 190 151 394 27 0 0 0 0 0 0 0 0 0 0 0

bZIP2_2_EEAD0097_EEADannot_rc_shift13 (bZIP2_2:EEAD0097:EEADannot_rc) 0.926 0.529 2.862 0.930 0.961 71 603 663 124 82 308.600
; assembly_6 versus bZIP2_2_EEAD0097_EEADannot_rc (bZIP2_2:EEAD0097:EEADannot_rc); m=116/266; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 308.6; -------------sACGTGkm-- ; cor=0.926; Ncor=0.529; logoDP=2.862; NsEucl=0.930; NSW=0.961; rcor=71; rNcor=603; rlogoDP=663; rNsEucl=124; rNSW=82; rank_mean=308.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 338 0 0 0 0 0 174 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 176 0 338 0 0 0 0 110 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 338 0 338 210 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 67 0 0 0 338 0 128 54 0 0

GT3a_MA1207.1_JASPAR_shift11 (GT3a:MA1207.1:JASPAR) 0.829 0.524 6.665 0.926 0.935 350 626 184 150 244 310.800
; assembly_6 versus GT3a_MA1207.1_JASPAR (GT3a:MA1207.1:JASPAR); m=118/266; ncol2=8; w=0; offset=2; strand=D; shift=11; score= 310.8; -----------rrCACGTG---- ; cor=0.829; Ncor=0.524; logoDP=6.665; NsEucl=0.926; NSW=0.935; rcor=350; rNcor=626; rlogoDP=184; rNsEucl=150; rNSW=244; rank_mean=310.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 145 155 11 371 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 72 69 360 0 328 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 96 98 0 0 0 371 0 324 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 58 49 0 0 43 0 371 47 0 0 0 0

HY5_HY5_Athamap_rc_shift9 (HY5:HY5:Athamap_rc) 0.905 0.711 1.184 0.919 0.928 103 86 824 241 316 314.000
; assembly_6 versus HY5_HY5_Athamap_rc (HY5:HY5:Athamap_rc); m=119/266; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 314; ---------ATGmCACGTGG--- ; cor=0.905; Ncor=0.711; logoDP=1.184; NsEucl=0.919; NSW=0.928; rcor=103; rNcor=86; rlogoDP=824; rNsEucl=241; rNSW=316; rank_mean=314.000; match_rank= a 0 0 0 0 0 0 0 0 0 2 0 0 1 0 2 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 2 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 2 0 2 2 0 0 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 2 0 0 0 0 0

BHLH106_ZmBIM2_B73_1_m1_EEAD0207_EEADannot_shift7 (BHLH106_ZmBIM2_B73_1_m1:EEAD0207:EEADannot) 0.781 0.635 7.222 0.922 0.920 607 227 122 204 423 316.600
; assembly_6 versus BHLH106_ZmBIM2_B73_1_m1_EEAD0207_EEADannot (BHLH106_ZmBIM2_B73_1_m1:EEAD0207:EEADannot); m=120/266; ncol2=7; w=-2; offset=-2; strand=D; shift=7; score= 316.6; -------gssrcgC--------- ; cor=0.781; Ncor=0.635; logoDP=7.222; NsEucl=0.922; NSW=0.920; rcor=607; rNcor=227; rlogoDP=122; rNsEucl=204; rNSW=423; rank_mean=316.600; match_rank= a 0 0 0 0 0 0 0 14 15 18 32 18 10 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 21 36 36 24 35 14 100 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 56 26 29 31 23 55 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 9 23 17 13 24 21 0 0 0 0 0 0 0 0 0 0

NAC072_UN0821.1_JASPAR_rc_shift11 (NAC072:UN0821.1:JASPAR_rc) 0.847 0.605 4.815 0.916 0.930 274 327 420 270 296 317.400
; assembly_6 versus NAC072_UN0821.1_JASPAR_rc (NAC072:UN0821.1:JASPAR_rc); m=121/266; ncol2=6; w=0; offset=2; strand=R; shift=11; score= 317.4; -----------GACACG------ ; cor=0.847; Ncor=0.605; logoDP=4.815; NsEucl=0.916; NSW=0.930; rcor=274; rNcor=327; rlogoDP=420; rNsEucl=270; rNSW=296; rank_mean=317.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 308 2303 199 2726 141 150 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 250 282 2359 46 2552 64 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 2012 85 209 64 64 2552 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 337 237 140 71 150 141 0 0 0 0 0 0

BZIP86_Mo17_2_EEAD0304_EEADannot_shift11 (BZIP86_Mo17_2:EEAD0304:EEADannot) 0.814 0.639 5.714 0.916 0.922 432 216 266 284 394 318.400
; assembly_6 versus BZIP86_Mo17_2_EEAD0304_EEADannot (BZIP86_Mo17_2:EEAD0304:EEADannot); m=122/266; ncol2=7; w=0; offset=2; strand=D; shift=11; score= 318.4; -----------GCCACGT----- ; cor=0.814; Ncor=0.639; logoDP=5.714; NsEucl=0.916; NSW=0.922; rcor=432; rNcor=216; rlogoDP=266; rNsEucl=284; rNSW=394; rank_mean=318.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 2 23 0 96 1 8 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 5 76 100 2 89 9 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 78 1 0 1 4 82 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 15 0 0 1 6 1 100 0 0 0 0 0

PHYPADRAFT_143875_MA0988.1_JASPAR_shift11 (PHYPADRAFT_143875:MA0988.1:JASPAR) 0.838 0.599 5.059 0.917 0.931 312 356 378 264 283 318.600
; assembly_6 versus PHYPADRAFT_143875_MA0988.1_JASPAR (PHYPADRAFT_143875:MA0988.1:JASPAR); m=123/266; ncol2=12; w=0; offset=2; strand=D; shift=11; score= 318.6; -----------hgCACGTGcd-- ; cor=0.838; Ncor=0.599; logoDP=5.059; NsEucl=0.917; NSW=0.931; rcor=312; rNcor=356; rlogoDP=378; rNsEucl=264; rNSW=283; rank_mean=318.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 250 208 106 923 22 39 66 38 169 256 0 0 c 0 0 0 0 0 0 0 0 0 0 0 272 231 844 0 940 0 10 12 392 222 0 0 g 0 0 0 0 0 0 0 0 0 0 0 222 392 12 10 0 940 0 844 231 272 0 0 t 0 0 0 0 0 0 0 0 0 0 0 256 169 38 66 39 22 923 106 208 250 0 0

PIF1_MA0552.1_JASPAR_rc_shift12 (PIF1:MA0552.1:JASPAR_rc) 0.915 0.592 0.294 0.943 0.965 86 375 1003 62 74 320.000
; assembly_6 versus PIF1_MA0552.1_JASPAR_rc (PIF1:MA0552.1:JASPAR_rc); m=124/266; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 320; ------------cCACGTGwcc- ; cor=0.915; Ncor=0.592; logoDP=0.294; NsEucl=0.943; NSW=0.965; rcor=86; rNcor=375; rlogoDP=1003; rNsEucl=62; rNSW=74; rank_mean=320.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 18 0 112 0 0 0 0 48 15 28 0 c 0 0 0 0 0 0 0 0 0 0 0 0 51 114 0 114 1 0 11 14 73 32 0 g 0 0 0 0 0 0 0 0 0 0 0 0 23 0 2 0 113 0 103 14 17 27 0 t 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 114 0 38 9 27 0

BZIP68_ZmABF2_Mo17_1_EEAD0293_EEADannot_shift11 (BZIP68_ZmABF2_Mo17_1:EEAD0293:EEADannot) 0.816 0.641 6.728 0.913 0.916 419 212 179 335 464 321.800
; assembly_6 versus BZIP68_ZmABF2_Mo17_1_EEAD0293_EEADannot (BZIP68_ZmABF2_Mo17_1:EEAD0293:EEADannot); m=125/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 321.8; -----------GCCACGTswb-- ; cor=0.816; Ncor=0.641; logoDP=6.728; NsEucl=0.913; NSW=0.916; rcor=419; rNcor=212; rlogoDP=179; rNsEucl=335; rNSW=464; rank_mean=321.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 1 20 0 100 0 4 0 4 56 9 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 80 100 0 99 10 0 58 1 37 0 0 g 0 0 0 0 0 0 0 0 0 0 0 92 0 0 0 0 86 0 38 18 25 0 0 t 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 1 0 100 0 25 29 0 0

BEE2_MA0956.2_JASPAR_shift13 (BEE2:MA0956.2:JASPAR) 0.988 0.424 3.667 0.957 0.989 13 989 561 29 19 322.200
; assembly_6 versus BEE2_MA0956.2_JASPAR (BEE2:MA0956.2:JASPAR); m=126/266; ncol2=10; w=0; offset=4; strand=D; shift=13; score= 322.2; -------------CACGTG---- ; cor=0.988; Ncor=0.424; logoDP=3.667; NsEucl=0.957; NSW=0.989; rcor=13; rNcor=989; rlogoDP=561; rNsEucl=29; rNSW=19; rank_mean=322.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 136 893 23 157 74 104 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 722 0 820 0 33 38 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 38 33 0 820 0 722 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 104 74 157 23 893 136 0 0 0 0

e_gw1.209.40.1_M0250_1.02_CISBP_shift11 (e_gw1.209.40.1:M0250_1.02:CISBP) 0.837 0.598 5.024 0.917 0.931 317 359 386 267 289 323.600
; assembly_6 versus e_gw1.209.40.1_M0250_1.02_CISBP (e_gw1.209.40.1:M0250_1.02:CISBP); m=127/266; ncol2=8; w=0; offset=2; strand=D; shift=11; score= 323.6; -----------hgCACGTG---- ; cor=0.837; Ncor=0.598; logoDP=5.024; NsEucl=0.917; NSW=0.931; rcor=317; rNcor=359; rlogoDP=386; rNsEucl=267; rNSW=289; rank_mean=323.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 25 21 11 92 2 4 7 4 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 27 23 84 0 94 0 1 1 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 22 39 1 1 0 94 0 84 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 26 17 4 7 4 2 92 11 0 0 0 0

ABF2_MA0941.2_JASPAR_shift12 (ABF2:MA0941.2:JASPAR) 0.915 0.457 5.283 0.920 0.955 85 858 338 231 107 323.800
; assembly_6 versus ABF2_MA0941.2_JASPAR (ABF2:MA0941.2:JASPAR); m=128/266; ncol2=10; w=0; offset=3; strand=D; shift=12; score= 323.8; ------------ACACGTg---- ; cor=0.915; Ncor=0.457; logoDP=5.283; NsEucl=0.920; NSW=0.955; rcor=85; rNcor=858; rlogoDP=338; rNsEucl=231; rNSW=107; rank_mean=323.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 699 0 999 0 19 19 218 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 177 840 0 917 19 19 59 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 103 0 0 0 942 19 664 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 21 159 0 82 19 942 59 0 0 0 0

BHLH91_MYC2B_Mo17_1_EEAD0235_EEADannot_shift4 (BHLH91_MYC2B_Mo17_1:EEAD0235:EEADannot) 0.866 0.456 5.621 0.927 0.947 199 869 273 140 139 324.000
; assembly_6 versus BHLH91_MYC2B_Mo17_1_EEAD0235_EEADannot (BHLH91_MYC2B_Mo17_1:EEAD0235:EEADannot); m=129/266; ncol2=10; w=-5; offset=-5; strand=D; shift=4; score= 324; ----cayrwkwaaC--------- ; cor=0.866; Ncor=0.456; logoDP=5.621; NsEucl=0.927; NSW=0.947; rcor=199; rNcor=869; rlogoDP=273; rNsEucl=140; rNSW=139; rank_mean=324.000; match_rank= a 0 0 0 0 22 52 17 42 27 17 26 50 47 16 0 0 0 0 0 0 0 0 0 c 0 0 0 0 50 14 45 4 8 7 11 12 21 84 0 0 0 0 0 0 0 0 0 g 0 0 0 0 13 18 5 37 4 29 17 14 17 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 15 16 33 17 61 47 46 24 15 0 0 0 0 0 0 0 0 0 0

PIF3_MA0560.2_JASPAR_rc_shift13 (PIF3:MA0560.2:JASPAR_rc) 0.985 0.493 1.076 0.960 0.989 17 743 838 26 18 328.400
; assembly_6 versus PIF3_MA0560.2_JASPAR_rc (PIF3:MA0560.2:JASPAR_rc); m=130/266; ncol2=10; w=0; offset=4; strand=R; shift=13; score= 328.4; -------------CACGTGG--- ; cor=0.985; Ncor=0.493; logoDP=1.076; NsEucl=0.960; NSW=0.989; rcor=17; rNcor=743; rlogoDP=838; rNsEucl=26; rNSW=18; rank_mean=328.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 527 0 118 0 0 15 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 527 0 527 0 0 0 94 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 409 0 527 399 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 527 0 19 0 0 0

NFYC2_UN0690.2_JASPAR_rc_shift10 (NFYC2:UN0690.2:JASPAR_rc) 0.959 0.548 0.303 0.949 0.980 37 541 1000 37 32 329.400
; assembly_6 versus NFYC2_UN0690.2_JASPAR_rc (NFYC2:UN0690.2:JASPAR_rc); m=131/266; ncol2=7; w=0; offset=1; strand=R; shift=10; score= 329.4; ----------TGCCACG------ ; cor=0.959; Ncor=0.548; logoDP=0.303; NsEucl=0.949; NSW=0.980; rcor=37; rNcor=541; rlogoDP=1000; rNsEucl=37; rNSW=32; rank_mean=329.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 431 110 903 86 4473 105 160 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 508 174 3438 4421 23 4428 87 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 184 4053 103 53 105 31 4264 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 3557 343 236 120 79 116 169 0 0 0 0 0 0

ABI5_ABI5_Athamap_shift11 (ABI5:ABI5:Athamap) 0.856 0.550 6.280 0.911 0.929 239 536 213 357 306 330.200
; assembly_6 versus ABI5_ABI5_Athamap (ABI5:ABI5:Athamap); m=132/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 330.2; -----------KMyACGTbR--- ; cor=0.856; Ncor=0.550; logoDP=6.280; NsEucl=0.911; NSW=0.929; rcor=239; rNcor=536; rlogoDP=213; rNsEucl=357; rNSW=306; rank_mean=330.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 3 0 4 0 0 0 0 1 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 4 0 0 1 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 4 0 2 3 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 4 1 0 0 0 0

GBF3_MA1351.3_JASPAR_rc_shift10 (GBF3:MA1351.3:JASPAR_rc) 0.960 0.549 0.287 0.949 0.979 36 540 1009 39 34 331.600
; assembly_6 versus GBF3_MA1351.3_JASPAR_rc (GBF3:MA1351.3:JASPAR_rc); m=133/266; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 331.6; ----------TGCCACGT----- ; cor=0.960; Ncor=0.549; logoDP=0.287; NsEucl=0.949; NSW=0.979; rcor=36; rNcor=540; rlogoDP=1009; rNsEucl=39; rNSW=34; rank_mean=331.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 801 228 1454 131 9185 232 512 860 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 831 275 7410 9137 27 8749 340 636 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 400 8130 212 60 113 139 8349 509 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 7429 828 385 133 136 341 260 7456 0 0 0 0 0

bHLH77_MA1362.1_JASPAR_shift6 (bHLH77:MA1362.1:JASPAR) 0.807 0.569 7.263 0.920 0.923 470 468 114 225 381 331.600
; assembly_6 versus bHLH77_MA1362.1_JASPAR (bHLH77:MA1362.1:JASPAR); m=134/266; ncol2=7; w=-3; offset=-3; strand=D; shift=6; score= 331.6; ------rwkwdgb---------- ; cor=0.807; Ncor=0.569; logoDP=7.263; NsEucl=0.920; NSW=0.923; rcor=470; rNcor=468; rlogoDP=114; rNsEucl=225; rNSW=381; rank_mean=331.600; match_rank= a 0 0 0 0 0 0 21 28 16 31 21 13 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 12 13 2 4 13 7 23 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 35 12 32 10 22 40 22 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 7 22 25 30 19 15 30 0 0 0 0 0 0 0 0 0 0

POC1_M0151_1.02_CISBP_shift13 (POC1:M0151_1.02:CISBP) 0.924 0.462 4.259 0.924 0.960 73 845 481 171 90 332.000
; assembly_6 versus POC1_M0151_1.02_CISBP (POC1:M0151_1.02:CISBP); m=135/266; ncol2=12; w=0; offset=4; strand=D; shift=13; score= 332; -------------cAYGTGs--- ; cor=0.924; Ncor=0.462; logoDP=4.259; NsEucl=0.924; NSW=0.960; rcor=73; rNcor=845; rlogoDP=481; rNsEucl=171; rNSW=90; rank_mean=332.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 18 73 0 0 0 1 22 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 55 0 71 0 1 1 30 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 14 17 0 88 0 98 35 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 13 10 29 12 99 0 13 0 0 0

ACGT_EEAD0085_EEADannot_shift13 (ACGT:EEAD0085:EEADannot) 0.938 0.402 5.536 0.923 0.965 53 1076 287 183 75 334.800
; assembly_6 versus ACGT_EEAD0085_EEADannot (ACGT:EEAD0085:EEADannot); m=136/266; ncol2=9; w=0; offset=4; strand=D; shift=13; score= 334.8; -------------cACGTs---- ; cor=0.938; Ncor=0.402; logoDP=5.536; NsEucl=0.923; NSW=0.965; rcor=53; rNcor=1076; rlogoDP=287; rNsEucl=183; rNSW=75; rank_mean=334.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 2 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 10 0 0 3 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 10 0 5 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 10 0 0 0 0 0

PHYPA_008731_MA2393.1_JASPAR_shift13 (PHYPA_008731:MA2393.1:JASPAR) 0.907 0.454 7.349 0.909 0.942 102 879 106 414 177 335.600
; assembly_6 versus PHYPA_008731_MA2393.1_JASPAR (PHYPA_008731:MA2393.1:JASPAR); m=137/266; ncol2=8; w=0; offset=4; strand=D; shift=13; score= 335.6; -------------CACGTGc--- ; cor=0.907; Ncor=0.454; logoDP=7.349; NsEucl=0.909; NSW=0.942; rcor=102; rNcor=879; rlogoDP=106; rNsEucl=414; rNSW=177; rank_mean=335.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 998 0 53 0 0 143 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 998 0 998 0 0 0 641 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 945 0 998 71 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 998 0 143 0 0 0

AT2G18300_M0155_1.02_CISBP_shift9 (AT2G18300:M0155_1.02:CISBP) 0.782 0.670 6.576 0.916 0.916 605 149 190 273 463 336.000
; assembly_6 versus AT2G18300_M0155_1.02_CISBP (AT2G18300:M0155_1.02:CISBP); m=138/266; ncol2=10; w=0; offset=0; strand=D; shift=9; score= 336; ---------cgkGCACGTG---- ; cor=0.782; Ncor=0.670; logoDP=6.576; NsEucl=0.916; NSW=0.916; rcor=605; rNcor=149; rlogoDP=190; rNsEucl=273; rNSW=463; rank_mean=336.000; match_rank= a 0 0 0 0 0 0 0 0 0 23 23 13 2 0 100 0 0 2 2 0 0 0 0 c 0 0 0 0 0 0 0 0 0 31 23 24 11 100 0 90 0 2 2 0 0 0 0 g 0 0 0 0 0 0 0 0 0 23 31 32 76 0 0 0 100 2 94 0 0 0 0 t 0 0 0 0 0 0 0 0 0 23 23 31 11 0 0 10 0 94 2 0 0 0 0

BZR2_MA0549.2_JASPAR_rc_shift10 (BZR2:MA0549.2:JASPAR_rc) 0.859 0.614 2.584 0.920 0.936 225 293 707 229 228 336.400
; assembly_6 versus BZR2_MA0549.2_JASPAR_rc (BZR2:MA0549.2:JASPAR_rc); m=139/266; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 336.4; ----------bsmCACGT----- ; cor=0.859; Ncor=0.614; logoDP=2.584; NsEucl=0.920; NSW=0.936; rcor=225; rNcor=293; rlogoDP=707; rNsEucl=229; rNSW=228; rank_mean=336.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 1 3 42 0 99 0 0 6 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 33 46 36 96 0 99 0 4 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 29 33 5 0 0 0 99 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 36 17 16 3 0 0 0 89 0 0 0 0 0

ILR3_M0167_1.02_CISBP_shift11 (ILR3:M0167_1.02:CISBP) 0.855 0.611 2.921 0.918 0.933 240 304 654 249 256 340.600
; assembly_6 versus ILR3_M0167_1.02_CISBP (ILR3:M0167_1.02:CISBP); m=140/266; ncol2=14; w=0; offset=2; strand=D; shift=11; score= 340.6; -----------rrCACGTGyy-- ; cor=0.855; Ncor=0.611; logoDP=2.921; NsEucl=0.918; NSW=0.933; rcor=240; rNcor=304; rlogoDP=654; rNsEucl=249; rNSW=256; rank_mean=340.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 26 27 12 68 0 14 11 6 17 24 0 0 c 0 0 0 0 0 0 0 0 0 0 0 20 23 80 8 86 0 13 2 33 31 0 0 g 0 0 0 0 0 0 0 0 0 0 0 30 33 2 13 0 86 8 79 23 20 0 0 t 0 0 0 0 0 0 0 0 0 0 0 24 17 6 11 14 0 68 13 27 25 0 0

BIM2_MA0965.1_JASPAR_shift11 (BIM2:MA0965.1:JASPAR) 0.827 0.591 5.388 0.914 0.926 359 385 311 311 339 341.000
; assembly_6 versus BIM2_MA0965.1_JASPAR (BIM2:MA0965.1:JASPAR); m=141/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 341; -----------skCACGTGms-- ; cor=0.827; Ncor=0.591; logoDP=5.388; NsEucl=0.914; NSW=0.926; rcor=359; rNcor=385; rlogoDP=311; rNsEucl=311; rNSW=339; rank_mean=341.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 244 167 53 962 22 92 14 49 317 205 0 0 c 0 0 0 0 0 0 0 0 0 0 0 261 143 897 0 885 0 24 1 373 290 0 0 g 0 0 0 0 0 0 0 0 0 0 0 290 373 1 24 0 885 0 897 143 261 0 0 t 0 0 0 0 0 0 0 0 0 0 0 205 317 49 14 92 22 962 53 167 244 0 0

bHLH34_M0157_1.02_CISBP_rc_shift12 (bHLH34:M0157_1.02:CISBP_rc) 0.875 0.500 6.210 0.910 0.936 171 713 217 378 227 341.200
; assembly_6 versus bHLH34_M0157_1.02_CISBP_rc (bHLH34:M0157_1.02:CISBP_rc); m=142/266; ncol2=6; w=0; offset=3; strand=R; shift=12; score= 341.2; ------------mCACGT----- ; cor=0.875; Ncor=0.500; logoDP=6.210; NsEucl=0.910; NSW=0.936; rcor=171; rNcor=713; rlogoDP=217; rNsEucl=378; rNSW=227; rank_mean=341.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 29 0 100 0 15 3 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 48 100 0 100 0 24 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 85 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 73 0 0 0 0 0

BIM1_MA0964.1_JASPAR_shift12 (BIM1:MA0964.1:JASPAR) 0.839 0.599 3.689 0.919 0.935 311 354 558 240 246 341.800
; assembly_6 versus BIM1_MA0964.1_JASPAR (BIM1:MA0964.1:JASPAR); m=143/266; ncol2=20; w=0; offset=3; strand=D; shift=12; score= 341.8; ------------bcaCGTGmyv- ; cor=0.839; Ncor=0.599; logoDP=3.689; NsEucl=0.919; NSW=0.935; rcor=311; rNcor=354; rlogoDP=558; rNsEucl=240; rNSW=246; rank_mean=341.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 219 126 582 59 140 1 3 375 147 257 0 c 0 0 0 0 0 0 0 0 0 0 0 0 250 655 101 766 62 23 2 301 344 262 0 g 0 0 0 0 0 0 0 0 0 0 0 0 281 101 184 23 795 0 990 148 242 257 0 t 0 0 0 0 0 0 0 0 0 0 0 0 250 118 132 152 3 976 6 176 268 225 0

fgenesh1_pg.scaffold_37000071_M0251_1.02_CISBP_shift11 (fgenesh1_pg.scaffold_37000071:M0251_1.02:CISBP) 0.844 0.603 3.538 0.917 0.932 283 335 576 256 263 342.600
; assembly_6 versus fgenesh1_pg.scaffold_37000071_M0251_1.02_CISBP (fgenesh1_pg.scaffold_37000071:M0251_1.02:CISBP); m=144/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 342.6; -----------rkCACGTGmy-- ; cor=0.844; Ncor=0.603; logoDP=3.538; NsEucl=0.917; NSW=0.932; rcor=283; rNcor=335; rlogoDP=576; rNsEucl=256; rNSW=263; rank_mean=342.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 26 21 7 81 5 15 8 6 34 19 0 0 c 0 0 0 0 0 0 0 0 0 0 0 24 18 85 0 80 0 11 2 27 31 0 0 g 0 0 0 0 0 0 0 0 0 0 0 31 27 2 10 0 80 0 85 18 24 0 0 t 0 0 0 0 0 0 0 0 0 0 0 19 34 6 9 15 5 81 7 21 26 0 0

BIM2_M0154_1.02_CISBP_shift11 (BIM2:M0154_1.02:CISBP) 0.826 0.590 5.383 0.914 0.926 360 387 314 313 342 343.200
; assembly_6 versus BIM2_M0154_1.02_CISBP (BIM2:M0154_1.02:CISBP); m=145/266; ncol2=9; w=0; offset=2; strand=D; shift=11; score= 343.2; -----------skCACGTGm--- ; cor=0.826; Ncor=0.590; logoDP=5.383; NsEucl=0.914; NSW=0.926; rcor=360; rNcor=387; rlogoDP=314; rNsEucl=313; rNSW=342; rank_mean=343.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 24 17 5 96 2 9 1 5 32 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 26 14 90 1 89 0 2 0 37 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 29 37 0 2 0 89 1 90 14 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 21 32 5 1 9 2 96 5 17 0 0 0

OsbZIP43_UN0825.1_JASPAR_rc_shift12 (OsbZIP43:UN0825.1:JASPAR_rc) 0.986 0.493 0.556 0.965 0.991 16 738 933 17 14 343.600
; assembly_6 versus OsbZIP43_UN0825.1_JASPAR_rc (OsbZIP43:UN0825.1:JASPAR_rc); m=147/266; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 343.6; ------------cCACGTG---- ; cor=0.986; Ncor=0.493; logoDP=0.556; NsEucl=0.965; NSW=0.991; rcor=16; rNcor=738; rlogoDP=933; rNsEucl=17; rNSW=14; rank_mean=343.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 200 0 999 0 0 0 25 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 642 927 0 999 0 0 222 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 42 72 0 0 999 0 726 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 114 0 0 0 0 999 25 0 0 0 0

PHYPADRAFT_72483_MA1011.1_JASPAR_shift11 (PHYPADRAFT_72483:MA1011.1:JASPAR) 0.844 0.603 3.515 0.917 0.932 284 336 578 257 265 344.000
; assembly_6 versus PHYPADRAFT_72483_MA1011.1_JASPAR (PHYPADRAFT_72483:MA1011.1:JASPAR); m=148/266; ncol2=8; w=0; offset=2; strand=D; shift=11; score= 344; -----------rkCACGTG---- ; cor=0.844; Ncor=0.603; logoDP=3.515; NsEucl=0.917; NSW=0.932; rcor=284; rNcor=336; rlogoDP=578; rNsEucl=257; rNSW=265; rank_mean=344.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 264 210 69 806 55 146 87 64 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 238 181 849 0 800 0 106 17 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 308 272 17 106 0 800 0 849 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 190 337 64 87 146 55 806 69 0 0 0 0

ABF1_M0257_1.02_CISBP_rc_shift11 (ABF1:M0257_1.02:CISBP_rc) 0.848 0.666 0.468 0.926 0.940 269 161 949 153 190 344.400
; assembly_6 versus ABF1_M0257_1.02_CISBP_rc (ABF1:M0257_1.02:CISBP_rc); m=149/266; ncol2=8; w=0; offset=2; strand=R; shift=11; score= 344.4; -----------vmCACGTG---- ; cor=0.848; Ncor=0.666; logoDP=0.468; NsEucl=0.926; NSW=0.940; rcor=269; rNcor=161; rlogoDP=949; rNsEucl=153; rNSW=190; rank_mean=344.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 26 25 13 90 0 9 8 9 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 28 40 71 0 82 0 10 1 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 28 19 4 10 0 91 8 74 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 18 16 12 0 18 0 74 16 0 0 0 0

ABF3_MA0930.3_JASPAR_shift14 (ABF3:MA0930.3:JASPAR) 0.915 0.457 4.266 0.922 0.957 88 860 477 202 97 344.800
; assembly_6 versus ABF3_MA0930.3_JASPAR (ABF3:MA0930.3:JASPAR); m=150/266; ncol2=10; w=0; offset=5; strand=D; shift=14; score= 344.8; --------------aCGTGtC-- ; cor=0.915; Ncor=0.457; logoDP=4.266; NsEucl=0.922; NSW=0.957; rcor=88; rNcor=860; rlogoDP=477; rNsEucl=202; rNSW=97; rank_mean=344.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5658 143 51 339 420 781 662 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 606 8374 51 321 296 368 7781 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 908 36 8414 381 7845 1935 60 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1420 39 76 7551 31 5508 89 0 0

HBI1_MA1025.1_JASPAR_shift9 (HBI1:MA1025.1:JASPAR) 0.779 0.667 6.560 0.916 0.915 622 158 192 283 477 346.400
; assembly_6 versus HBI1_MA1025.1_JASPAR (HBI1:MA1025.1:JASPAR); m=151/266; ncol2=10; w=0; offset=0; strand=D; shift=9; score= 346.4; ---------cgkGCACGTG---- ; cor=0.779; Ncor=0.667; logoDP=6.560; NsEucl=0.916; NSW=0.915; rcor=622; rNcor=158; rlogoDP=192; rNsEucl=283; rNSW=477; rank_mean=346.400; match_rank= a 0 0 0 0 0 0 0 0 0 229 229 132 24 0 1000 0 0 21 21 0 0 0 0 c 0 0 0 0 0 0 0 0 0 313 229 240 106 1000 0 904 0 21 21 0 0 0 0 g 0 0 0 0 0 0 0 0 0 229 313 315 762 0 0 0 1000 21 936 0 0 0 0 t 0 0 0 0 0 0 0 0 0 229 229 313 108 0 0 95 0 936 21 0 0 0 0

bZIP68_M0255_1.02_CISBP_shift12 (bZIP68:M0255_1.02:CISBP) 0.885 0.569 2.681 0.919 0.940 143 469 696 243 184 347.000
; assembly_6 versus bZIP68_M0255_1.02_CISBP (bZIP68:M0255_1.02:CISBP); m=152/266; ncol2=8; w=0; offset=3; strand=D; shift=12; score= 347; ------------hsacgTGk--- ; cor=0.885; Ncor=0.569; logoDP=2.681; NsEucl=0.919; NSW=0.940; rcor=143; rNcor=469; rlogoDP=696; rNsEucl=243; rNSW=184; rank_mean=347.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 25 19 62 7 12 3 3 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 34 33 13 65 16 6 0 7 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 12 26 14 15 63 0 95 55 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 29 22 11 13 9 91 2 38 0 0 0

GLYMA-06G314400_MA1808.2_JASPAR_rc_shift10 (GLYMA-06G314400:MA1808.2:JASPAR_rc) 0.944 0.539 0.300 0.942 0.973 47 572 1001 69 47 347.200
; assembly_6 versus GLYMA-06G314400_MA1808.2_JASPAR_rc (GLYMA-06G314400:MA1808.2:JASPAR_rc); m=153/266; ncol2=21; w=0; offset=1; strand=R; shift=10; score= 347.2; ----------TGCCACGt----- ; cor=0.944; Ncor=0.539; logoDP=0.300; NsEucl=0.942; NSW=0.973; rcor=47; rNcor=572; rlogoDP=1001; rNsEucl=69; rNSW=47; rank_mean=347.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 1920 603 4225 666 26663 900 939 3322 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 2120 862 21101 26215 207 25777 1277 3696 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 1356 24505 1261 357 530 411 24345 2293 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 22437 1863 1246 595 433 745 1272 18522 0 0 0 0 0

MYC3_M0165_1.02_CISBP_rc_shift9 (MYC3:M0165_1.02:CISBP_rc) 0.881 0.629 0.265 0.926 0.945 151 248 1029 160 155 348.600
; assembly_6 versus MYC3_M0165_1.02_CISBP_rc (MYC3:M0165_1.02:CISBP_rc); m=154/266; ncol2=7; w=0; offset=0; strand=R; shift=9; score= 348.6; ---------wwvsCAC------- ; cor=0.881; Ncor=0.629; logoDP=0.265; NsEucl=0.926; NSW=0.945; rcor=151; rNcor=248; rlogoDP=1029; rNsEucl=160; rNSW=155; rank_mean=348.600; match_rank= a 0 0 0 0 0 0 0 0 0 27 30 26 23 18 87 8 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 20 24 26 25 73 0 74 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 23 21 25 35 0 12 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 30 25 23 17 9 1 18 0 0 0 0 0 0 0

BHLH34_MA0962.1_JASPAR_shift12 (BHLH34:MA0962.1:JASPAR) 0.873 0.499 6.197 0.910 0.935 176 717 219 391 240 348.600
; assembly_6 versus BHLH34_MA0962.1_JASPAR (BHLH34:MA0962.1:JASPAR); m=155/266; ncol2=10; w=0; offset=3; strand=D; shift=12; score= 348.6; ------------gCACGTGk--- ; cor=0.873; Ncor=0.499; logoDP=6.197; NsEucl=0.910; NSW=0.935; rcor=176; rNcor=717; rlogoDP=219; rNsEucl=391; rNSW=240; rank_mean=348.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 154 0 727 0 0 0 0 96 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 39 999 0 848 0 0 0 143 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 653 0 242 0 999 0 999 476 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 154 0 31 152 0 999 0 286 0 0 0

BAM8_MA2014.1_JASPAR_shift9 (BAM8:MA2014.1:JASPAR) 0.745 0.745 7.027 0.919 0.909 795 50 143 237 532 351.400
; assembly_6 versus BAM8_MA2014.1_JASPAR (BAM8:MA2014.1:JASPAR); m=156/266; ncol2=17; w=0; offset=0; strand=D; shift=9; score= 351.4; ---------ytCACACGTGysaa ; cor=0.745; Ncor=0.745; logoDP=7.027; NsEucl=0.919; NSW=0.909; rcor=795; rNcor=50; rlogoDP=143; rNsEucl=237; rNSW=532; rank_mean=351.400; match_rank= a 0 0 0 0 0 0 0 0 0 420 418 116 1383 6 1846 2 9 9 66 116 320 803 600 c 0 0 0 0 0 0 0 0 0 498 441 1278 101 1856 2 1862 1 31 1 1018 500 222 371 g 0 0 0 0 0 0 0 0 0 325 207 279 273 4 14 1 1863 5 1803 140 863 409 456 t 0 0 0 0 0 0 0 0 0 633 810 203 119 10 14 11 3 1831 6 602 193 442 449

GBF3_M0264_1.02_CISBP_rc_shift10 (GBF3:M0264_1.02:CISBP_rc) 0.856 0.612 1.346 0.921 0.938 236 301 803 213 211 352.800
; assembly_6 versus GBF3_M0264_1.02_CISBP_rc (GBF3:M0264_1.02:CISBP_rc); m=157/266; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 352.8; ----------kkmCAcgTvr--- ; cor=0.856; Ncor=0.612; logoDP=1.346; NsEucl=0.921; NSW=0.938; rcor=236; rNcor=301; rlogoDP=803; rNsEucl=213; rNSW=211; rank_mean=352.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 21 12 40 4 90 9 14 8 30 37 0 0 0 c 0 0 0 0 0 0 0 0 0 0 18 14 54 89 1 66 17 10 33 11 0 0 0 g 0 0 0 0 0 0 0 0 0 0 28 41 6 0 4 18 65 9 27 32 0 0 0 t 0 0 0 0 0 0 0 0 0 0 33 33 0 7 5 7 4 73 10 20 0 0 0

ILR3_MA2397.1_JASPAR_shift13 (ILR3:MA2397.1:JASPAR) 0.976 0.418 2.924 0.941 0.979 26 1007 653 72 33 358.200
; assembly_6 versus ILR3_MA2397.1_JASPAR (ILR3:MA2397.1:JASPAR); m=158/266; ncol2=10; w=0; offset=4; strand=D; shift=13; score= 358.2; -------------CACGTG---- ; cor=0.976; Ncor=0.418; logoDP=2.924; NsEucl=0.941; NSW=0.979; rcor=26; rNcor=1007; rlogoDP=653; rNsEucl=72; rNSW=33; rank_mean=358.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 129 681 2 132 112 55 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 796 84 864 2 120 18 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 18 120 2 864 84 796 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 55 112 132 2 681 129 0 0 0 0

bHLH104.DAP_M0175_AthalianaCistrome_rc_shift1 (bHLH104.DAP:M0175:AthalianaCistrome_rc) 0.929 0.507 0.476 0.952 0.972 64 698 947 35 48 358.400
; assembly_6 versus bHLH104.DAP_M0175_AthalianaCistrome_rc (bHLH104.DAP:M0175:AthalianaCistrome_rc); m=159/266; ncol2=21; w=-8; offset=-8; strand=R; shift=1; score= 358.4; -kscmsdkgywgvCACGTGbC-- ; cor=0.929; Ncor=0.507; logoDP=0.476; NsEucl=0.952; NSW=0.972; rcor=64; rNcor=698; rlogoDP=947; rNsEucl=35; rNSW=48; rank_mean=358.400; match_rank= a 0 8 8 8 16 2 13 9 12 12 14 6 16 0 44 0 0 0 0 5 3 0 0 c 0 2 22 25 20 18 8 5 11 20 11 5 16 49 0 50 0 3 0 14 37 0 0 g 0 25 15 8 6 25 15 22 26 3 6 29 14 1 1 0 49 0 50 13 0 0 0 t 0 15 5 9 8 5 14 14 1 15 19 10 4 0 5 0 1 47 0 18 10 0 0

BEE2_M0161_1.02_CISBP_rc_shift11 (BEE2:M0161_1.02:CISBP_rc) 0.839 0.599 3.658 0.916 0.930 308 352 563 276 302 360.200
; assembly_6 versus BEE2_M0161_1.02_CISBP_rc (BEE2:M0161_1.02:CISBP_rc); m=160/266; ncol2=9; w=0; offset=2; strand=R; shift=11; score= 360.2; -----------hgCACGTGc--- ; cor=0.839; Ncor=0.599; logoDP=3.658; NsEucl=0.916; NSW=0.930; rcor=308; rNcor=352; rlogoDP=563; rNsEucl=276; rNSW=302; rank_mean=360.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 26 21 14 89 2 16 8 10 22 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 25 23 72 0 82 0 3 4 34 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 24 34 4 3 0 82 0 72 23 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 25 22 10 8 16 2 89 14 21 0 0 0

SPT_MA1061.1_JASPAR_rc_shift12 (SPT:MA1061.1:JASPAR_rc) 0.893 0.574 0.441 0.926 0.951 129 447 954 146 125 360.200
; assembly_6 versus SPT_MA1061.1_JASPAR_rc (SPT:MA1061.1:JASPAR_rc); m=161/266; ncol2=7; w=0; offset=3; strand=R; shift=12; score= 360.2; ------------gCACGTG---- ; cor=0.893; Ncor=0.574; logoDP=0.441; NsEucl=0.926; NSW=0.951; rcor=129; rNcor=447; rlogoDP=954; rNsEucl=146; rNSW=125; rank_mean=360.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 242 76 988 0 80 16 39 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 237 724 0 912 0 99 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 301 115 12 0 910 0 961 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 221 84 0 88 9 885 0 0 0 0 0

BIM1_MA0964.2_JASPAR_shift10 (BIM1:MA0964.2:JASPAR) 0.776 0.665 7.319 0.912 0.908 640 167 108 338 551 360.800
; assembly_6 versus BIM1_MA0964.2_JASPAR (BIM1:MA0964.2:JASPAR); m=162/266; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 360.8; ----------wrTCACGTGA--- ; cor=0.776; Ncor=0.665; logoDP=7.319; NsEucl=0.912; NSW=0.908; rcor=640; rNcor=167; rlogoDP=108; rNsEucl=338; rNSW=551; rank_mean=360.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 433 433 96 5 1380 1 11 7 3 1011 0 0 0 c 0 0 0 0 0 0 0 0 0 0 255 271 91 1377 1 1376 0 0 3 190 0 0 0 g 0 0 0 0 0 0 0 0 0 0 283 535 190 3 0 0 1376 1 1377 91 0 0 0 t 0 0 0 0 0 0 0 0 0 0 417 149 1011 3 7 11 1 1380 5 96 0 0 0

BEE2_MA0956.1_JASPAR_shift11 (BEE2:MA0956.1:JASPAR) 0.837 0.598 3.672 0.916 0.929 316 358 559 279 303 363.000
; assembly_6 versus BEE2_MA0956.1_JASPAR (BEE2:MA0956.1:JASPAR); m=163/266; ncol2=14; w=0; offset=2; strand=D; shift=11; score= 363; -----------hgCACGTGcd-- ; cor=0.837; Ncor=0.598; logoDP=3.672; NsEucl=0.916; NSW=0.929; rcor=316; rNcor=358; rlogoDP=559; rNsEucl=279; rNSW=303; rank_mean=363.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 256 211 136 893 23 157 74 104 218 255 0 0 c 0 0 0 0 0 0 0 0 0 0 0 253 229 722 0 820 0 33 38 342 236 0 0 g 0 0 0 0 0 0 0 0 0 0 0 236 342 38 33 0 820 0 722 229 253 0 0 t 0 0 0 0 0 0 0 0 0 0 0 255 218 104 74 157 23 893 136 211 256 0 0

bHLH74.ampDAP_M0179_AthalianaCistrome_shift13 (bHLH74.ampDAP:M0179:AthalianaCistrome) 0.875 0.500 7.419 0.904 0.927 172 714 98 506 331 364.200
; assembly_6 versus bHLH74.ampDAP_M0179_AthalianaCistrome (bHLH74.ampDAP:M0179:AthalianaCistrome); m=164/266; ncol2=10; w=0; offset=4; strand=D; shift=13; score= 364.2; -------------CACGTGAy-- ; cor=0.875; Ncor=0.500; logoDP=7.419; NsEucl=0.904; NSW=0.927; rcor=172; rNcor=714; rlogoDP=98; rNsEucl=506; rNSW=331; rank_mean=364.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 87 0 7 0 0 65 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 87 0 87 0 0 0 20 54 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 80 0 87 2 3 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 87 0 0 30 0 0

Transcription_5gnj_AB_3D-footprint_shift11 (Transcription:5gnj_AB:3D-footprint) 0.870 0.497 7.213 0.905 0.928 191 723 124 491 317 369.200
; assembly_6 versus Transcription_5gnj_AB_3D-footprint (Transcription:5gnj_AB:3D-footprint); m=165/266; ncol2=15; w=0; offset=2; strand=D; shift=11; score= 369.2; -----------taCACGTG---- ; cor=0.870; Ncor=0.497; logoDP=7.213; NsEucl=0.905; NSW=0.928; rcor=191; rNcor=723; rlogoDP=124; rNsEucl=491; rNSW=317; rank_mean=369.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 12 60 0 96 12 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 12 12 96 0 84 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 12 12 0 0 0 96 0 96 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 60 12 0 0 0 0 96 0 0 0 0 0

TGA1a_TGA1a_Athamap_rc_shift11 (TGA1a:TGA1a:Athamap_rc) 0.816 0.583 6.216 0.911 0.920 415 417 216 377 425 370.000
; assembly_6 versus TGA1a_TGA1a_Athamap_rc (TGA1a:TGA1a:Athamap_rc); m=166/266; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 370; -----------swsACGTSds-- ; cor=0.816; Ncor=0.583; logoDP=6.216; NsEucl=0.911; NSW=0.920; rcor=415; rNcor=417; rlogoDP=216; rNsEucl=377; rNSW=425; rank_mean=370.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 1 3 0 11 0 0 0 0 4 1 0 0 c 0 0 0 0 0 0 0 0 0 0 0 5 2 7 0 11 0 0 3 1 4 0 0 g 0 0 0 0 0 0 0 0 0 0 0 4 1 4 0 0 11 0 8 3 5 0 0 t 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 11 0 3 1 0 0

BIM3_MA0966.1_JASPAR_shift11 (BIM3:MA0966.1:JASPAR) 0.822 0.587 4.957 0.913 0.925 386 400 395 321 357 371.800
; assembly_6 versus BIM3_MA0966.1_JASPAR (BIM3:MA0966.1:JASPAR); m=167/266; ncol2=12; w=0; offset=2; strand=D; shift=11; score= 371.8; -----------rgCACGTGcy-- ; cor=0.822; Ncor=0.587; logoDP=4.957; NsEucl=0.913; NSW=0.925; rcor=386; rNcor=400; rlogoDP=395; rNsEucl=321; rNSW=357; rank_mean=371.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 294 159 74 942 15 67 33 96 243 233 0 0 c 0 0 0 0 0 0 0 0 0 0 0 203 165 821 0 918 0 25 8 433 270 0 0 g 0 0 0 0 0 0 0 0 0 0 0 270 433 8 25 0 918 0 821 165 203 0 0 t 0 0 0 0 0 0 0 0 0 0 0 233 243 96 33 67 15 942 74 159 294 0 0

EmBP-1_MA0128.1_JASPAR_shift12 (EmBP-1:MA0128.1:JASPAR) 0.871 0.498 6.378 0.907 0.930 184 720 205 460 297 373.200
; assembly_6 versus EmBP-1_MA0128.1_JASPAR (EmBP-1:MA0128.1:JASPAR); m=168/266; ncol2=9; w=0; offset=3; strand=D; shift=12; score= 373.2; ------------WsACGTGG--- ; cor=0.871; Ncor=0.498; logoDP=6.378; NsEucl=0.907; NSW=0.930; rcor=184; rNcor=720; rlogoDP=205; rNsEucl=460; rNSW=297; rank_mean=373.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 9 1 13 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 12 0 0 1 1 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 13 0 12 12 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 1 0 13 0 0 0 0 0

bHLH74_MA1360.1_JASPAR_rc_shift7 (bHLH74:MA1360.1:JASPAR_rc) 0.847 0.565 0.705 0.940 0.949 273 482 902 79 131 373.400
; assembly_6 versus bHLH74_MA1360.1_JASPAR_rc (bHLH74:MA1360.1:JASPAR_rc); m=169/266; ncol2=15; w=-2; offset=-2; strand=R; shift=7; score= 373.4; -------wgrtskCACGTGmyw- ; cor=0.847; Ncor=0.565; logoDP=0.705; NsEucl=0.940; NSW=0.949; rcor=273; rNcor=482; rlogoDP=902; rNsEucl=79; rNSW=131; rank_mean=373.400; match_rank= a 0 0 0 0 0 0 0 86 36 58 48 49 24 0 198 6 0 0 0 51 25 63 0 c 0 0 0 0 0 0 0 18 36 42 48 52 32 198 0 191 0 0 5 72 63 48 0 g 0 0 0 0 0 0 0 11 87 60 38 66 68 0 0 0 198 0 193 49 37 23 0 t 0 0 0 0 0 0 0 83 39 38 64 31 74 0 0 1 0 198 0 26 73 64 0

MYC4_MA0569.2_JASPAR_shift13 (MYC4:MA0569.2:JASPAR) 0.897 0.449 6.782 0.905 0.937 118 896 176 480 214 376.800
; assembly_6 versus MYC4_MA0569.2_JASPAR (MYC4:MA0569.2:JASPAR); m=170/266; ncol2=15; w=0; offset=4; strand=D; shift=13; score= 376.8; -------------CACGTGC--- ; cor=0.897; Ncor=0.449; logoDP=6.782; NsEucl=0.905; NSW=0.937; rcor=118; rNcor=896; rlogoDP=176; rNsEucl=480; rNSW=214; rank_mean=376.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 5 99 0 2 0 0 2 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 94 0 1 0 72 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 98 0 98 8 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 99 2 17 0 0 0

BIM1_M0163_1.02_CISBP_rc_shift10 (BIM1:M0163_1.02:CISBP_rc) 0.839 0.599 1.754 0.919 0.935 309 353 765 239 242 381.600
; assembly_6 versus BIM1_M0163_1.02_CISBP_rc (BIM1:M0163_1.02:CISBP_rc); m=171/266; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 381.6; ----------brkCACGtgv--- ; cor=0.839; Ncor=0.599; logoDP=1.754; NsEucl=0.919; NSW=0.935; rcor=309; rNcor=353; rlogoDP=765; rNsEucl=239; rNSW=242; rank_mean=381.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 23 27 18 1 98 0 15 14 12 25 0 0 0 c 0 0 0 0 0 0 0 0 0 0 26 24 15 99 0 80 2 18 10 28 0 0 0 g 0 0 0 0 0 0 0 0 0 0 25 34 30 0 2 6 77 10 65 25 0 0 0 t 0 0 0 0 0 0 0 0 0 0 26 15 37 0 0 14 6 58 13 22 0 0 0

DPBF3_MA1668.1_JASPAR_rc_shift8 (DPBF3:MA1668.1:JASPAR_rc) 0.810 0.667 0.994 0.929 0.929 459 159 858 130 305 382.200
; assembly_6 versus DPBF3_MA1668.1_JASPAR_rc (DPBF3:MA1668.1:JASPAR_rc); m=172/266; ncol2=8; w=-1; offset=-1; strand=R; shift=8; score= 382.2; --------wwgrtsAC------- ; cor=0.810; Ncor=0.667; logoDP=0.994; NsEucl=0.929; NSW=0.929; rcor=459; rNcor=159; rlogoDP=858; rNsEucl=130; rNSW=305; rank_mean=382.200; match_rank= a 0 0 0 0 0 0 0 0 578 457 266 582 338 23 1631 2 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 240 261 141 383 298 550 5 1611 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 316 253 914 461 18 929 6 15 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 511 674 324 219 991 143 3 17 0 0 0 0 0 0 0

BIM3_M0164_1.02_CISBP_rc_shift11 (BIM3:M0164_1.02:CISBP_rc) 0.820 0.585 4.998 0.913 0.924 402 407 388 336 378 382.200
; assembly_6 versus BIM3_M0164_1.02_CISBP_rc (BIM3:M0164_1.02:CISBP_rc); m=173/266; ncol2=7; w=0; offset=2; strand=R; shift=11; score= 382.2; -----------rgCACGT----- ; cor=0.820; Ncor=0.585; logoDP=4.998; NsEucl=0.913; NSW=0.924; rcor=402; rNcor=407; rlogoDP=388; rNsEucl=336; rNSW=378; rank_mean=382.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 29 16 7 94 1 7 3 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 21 16 82 0 92 0 2 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 27 44 1 3 0 92 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 23 24 10 3 7 1 95 0 0 0 0 0

MYC2_M0152_1.02_CISBP_rc_shift11 (MYC2:M0152_1.02:CISBP_rc) 0.823 0.588 4.163 0.914 0.925 378 395 494 314 349 386.000
; assembly_6 versus MYC2_M0152_1.02_CISBP_rc (MYC2:M0152_1.02:CISBP_rc); m=174/266; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 386; -----------hrCACGTGyk-- ; cor=0.823; Ncor=0.588; logoDP=4.163; NsEucl=0.914; NSW=0.925; rcor=378; rNcor=395; rlogoDP=494; rNsEucl=314; rNSW=349; rank_mean=386.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 27 25 12 85 1 13 6 3 18 24 0 0 c 0 0 0 0 0 0 0 0 0 0 0 27 20 85 1 86 0 7 0 37 21 0 0 g 0 0 0 0 0 0 0 0 0 0 0 21 37 0 8 0 86 1 85 20 28 0 0 t 0 0 0 0 0 0 0 0 0 0 0 25 18 3 6 13 1 86 12 25 27 0 0

bHLH34.ampDAP_M0168_AthalianaCistrome_rc_shift1 (bHLH34.ampDAP:M0168:AthalianaCistrome_rc) 0.886 0.524 0.249 0.944 0.959 140 625 1039 54 93 390.200
; assembly_6 versus bHLH34.ampDAP_M0168_AthalianaCistrome_rc (bHLH34.ampDAP:M0168:AthalianaCistrome_rc); m=175/266; ncol2=15; w=-8; offset=-8; strand=R; shift=1; score= 390.2; -rmrygtgkmwdrCAC------- ; cor=0.886; Ncor=0.524; logoDP=0.249; NsEucl=0.944; NSW=0.959; rcor=140; rNcor=625; rlogoDP=1039; rNsEucl=54; rNSW=93; rank_mean=390.200; match_rank= a 0 151 164 209 92 103 139 101 140 182 158 151 225 0 569 0 0 0 0 0 0 0 0 c 0 105 231 132 227 111 83 49 122 158 113 78 137 572 2 573 0 0 0 0 0 0 0 g 0 204 82 152 70 281 87 334 155 91 135 196 158 0 1 0 0 0 0 0 0 0 0 t 0 113 96 80 184 78 264 89 156 142 167 148 53 1 1 0 0 0 0 0 0 0 0

bZIP68_MA0968.1_JASPAR_rc_shift11 (bZIP68:MA0968.1:JASPAR_rc) 0.885 0.569 0.459 0.918 0.940 146 470 951 245 186 399.600
; assembly_6 versus bZIP68_MA0968.1_JASPAR_rc (bZIP68:MA0968.1:JASPAR_rc); m=176/266; ncol2=14; w=0; offset=2; strand=R; shift=11; score= 399.6; -----------kmCAcgtsd--- ; cor=0.885; Ncor=0.569; logoDP=0.459; NsEucl=0.918; NSW=0.940; rcor=146; rNcor=470; rlogoDP=951; rNsEucl=245; rNSW=186; rank_mean=399.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 101 382 17 914 88 131 111 220 289 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 134 542 951 0 634 148 137 264 123 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 476 73 0 58 163 651 131 332 336 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 289 2 32 28 116 70 621 184 252 0 0 0

Transcription_5gnj_GIN_3D-footprint_shift13 (Transcription:5gnj_GIN:3D-footprint) 0.908 0.454 3.215 0.916 0.951 100 876 619 277 128 400.000
; assembly_6 versus Transcription_5gnj_GIN_3D-footprint (Transcription:5gnj_GIN:3D-footprint); m=177/266; ncol2=7; w=0; offset=4; strand=D; shift=13; score= 400; -------------CaCGtGt--- ; cor=0.908; Ncor=0.454; logoDP=3.215; NsEucl=0.916; NSW=0.951; rcor=100; rNcor=876; rlogoDP=619; rNsEucl=277; rNSW=128; rank_mean=400.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59 4 3 13 0 19 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 92 13 80 19 8 2 20 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 4 67 13 93 19 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 8 7 62 1 38 0 0 0

NFYB2_UN0689.1_JASPAR_shift10 (NFYB2:UN0689.1:JASPAR) 0.810 0.578 5.428 0.910 0.919 458 430 307 384 427 401.200
; assembly_6 versus NFYB2_UN0689.1_JASPAR (NFYB2:UN0689.1:JASPAR); m=178/266; ncol2=7; w=0; offset=1; strand=D; shift=10; score= 401.2; ----------wkACACG------ ; cor=0.810; Ncor=0.578; logoDP=5.428; NsEucl=0.910; NSW=0.919; rcor=458; rNcor=430; rlogoDP=307; rNsEucl=384; rNSW=427; rank_mean=401.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 2030 1465 6742 0 6665 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 1475 1097 224 7151 27 7439 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 1388 2724 211 21 498 0 7439 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 2546 2153 262 267 249 0 0 0 0 0 0 0 0

GT-3a_MA1207.2_JASPAR_rc_shift5 (GT-3a:MA1207.2:JASPAR_rc) 0.895 0.497 0.439 0.933 0.955 123 722 955 113 108 404.200
; assembly_6 versus GT-3a_MA1207.2_JASPAR_rc (GT-3a:MA1207.2:JASPAR_rc); m=179/266; ncol2=15; w=-4; offset=-4; strand=R; shift=5; score= 404.2; -----ahwWtwwaCACGTG---- ; cor=0.895; Ncor=0.497; logoDP=0.439; NsEucl=0.933; NSW=0.955; rcor=123; rNcor=722; rlogoDP=955; rNsEucl=113; rNSW=108; rank_mean=404.200; match_rank= a 0 0 0 0 0 213 134 196 108 87 133 126 201 47 371 0 43 0 0 0 0 0 0 c 0 0 0 0 0 36 104 4 0 14 40 57 76 324 0 371 0 0 0 0 0 0 0 g 0 0 0 0 0 42 3 64 4 66 15 82 40 0 0 0 328 0 360 0 0 0 0 t 0 0 0 0 0 80 130 107 259 204 183 106 54 0 0 0 0 371 11 0 0 0 0

GLYMA-13G317000_UN0421.1_JASPAR_shift10 (GLYMA-13G317000:UN0421.1:JASPAR) 0.806 0.576 5.479 0.909 0.917 473 441 299 409 450 414.400
; assembly_6 versus GLYMA-13G317000_UN0421.1_JASPAR (GLYMA-13G317000:UN0421.1:JASPAR); m=180/266; ncol2=14; w=0; offset=1; strand=D; shift=10; score= 414.4; ----------wgACACGTgk--- ; cor=0.806; Ncor=0.576; logoDP=5.479; NsEucl=0.909; NSW=0.917; rcor=473; rNcor=441; rlogoDP=299; rNsEucl=409; rNSW=450; rank_mean=414.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 4020 3343 15158 11 13931 0 0 290 3774 3204 0 0 0 c 0 0 0 0 0 0 0 0 0 0 3522 2447 355 15390 118 15919 0 365 2289 2479 0 0 0 g 0 0 0 0 0 0 0 0 0 0 3422 6249 177 93 1340 0 15919 65 7596 4529 0 0 0 t 0 0 0 0 0 0 0 0 0 0 4955 3880 229 425 530 0 0 15199 2260 5707 0 0 0

BIM2.DAP_M0157_AthalianaCistrome_rc_shift4 (BIM2.DAP:M0157:AthalianaCistrome_rc) 0.902 0.475 0.471 0.933 0.956 108 805 948 110 104 415.000
; assembly_6 versus BIM2.DAP_M0157_AthalianaCistrome_rc (BIM2.DAP:M0157:AthalianaCistrome_rc); m=181/266; ncol2=9; w=-5; offset=-5; strand=R; shift=4; score= 415; ----cgtgmrwgk---------- ; cor=0.902; Ncor=0.475; logoDP=0.471; NsEucl=0.933; NSW=0.956; rcor=108; rNcor=805; rlogoDP=948; rNsEucl=110; rNSW=104; rank_mean=415.000; match_rank= a 0 0 0 0 47 125 56 86 176 213 200 126 64 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 308 43 126 53 172 87 86 131 37 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 110 373 86 395 113 166 117 288 199 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 135 59 332 66 139 134 197 55 300 0 0 0 0 0 0 0 0 0 0

MYC4_M0160_1.02_CISBP_shift11 (MYC4:M0160_1.02:CISBP) 0.816 0.583 3.885 0.912 0.922 417 418 530 344 386 419.000
; assembly_6 versus MYC4_M0160_1.02_CISBP (MYC4:M0160_1.02:CISBP); m=182/266; ncol2=13; w=0; offset=2; strand=D; shift=11; score= 419; -----------mrCACGTGyk-- ; cor=0.816; Ncor=0.583; logoDP=3.885; NsEucl=0.912; NSW=0.922; rcor=417; rNcor=418; rlogoDP=530; rNsEucl=344; rNSW=386; rank_mean=419.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 28 26 13 86 3 15 7 4 19 24 0 0 c 0 0 0 0 0 0 0 0 0 0 0 28 19 83 0 82 0 7 1 36 20 0 0 g 0 0 0 0 0 0 0 0 0 0 0 20 36 1 7 0 82 0 82 19 28 0 0 t 0 0 0 0 0 0 0 0 0 0 0 24 19 3 7 15 3 86 13 26 28 0 0

BZIP63_MA1745.1_JASPAR_shift9 (BZIP63:MA1745.1:JASPAR) 0.752 0.645 5.610 0.913 0.909 763 207 275 322 528 419.000
; assembly_6 versus BZIP63_MA1745.1_JASPAR (BZIP63:MA1745.1:JASPAR); m=183/266; ncol2=10; w=0; offset=0; strand=D; shift=9; score= 419; ---------tgctsACGTG---- ; cor=0.752; Ncor=0.645; logoDP=5.610; NsEucl=0.913; NSW=0.909; rcor=763; rNcor=207; rlogoDP=275; rNsEucl=322; rNSW=528; rank_mean=419.000; match_rank= a 0 0 0 0 0 0 0 0 0 229 203 188 166 0.04 1000 0.04 0.04 21 47 0 0 0 0 c 0 0 0 0 0 0 0 0 0 229 203 437 148.14 356 0.04 1000 0.04 21 123.19 0 0 0 0 g 0 0 0 0 0 0 0 0 0 229 390 188 21 644 0.04 0.04 1000 21 783 0 0 0 0 t 0 0 0 0 0 0 0 0 0 313 203 188 665 0 0 0 0 937 47 0 0 0 0

ZCW32_M0153_1.02_CISBP_rc_shift12 (ZCW32:M0153_1.02:CISBP_rc) 0.870 0.559 0.549 0.917 0.938 189 507 934 259 206 419.000
; assembly_6 versus ZCW32_M0153_1.02_CISBP_rc (ZCW32:M0153_1.02:CISBP_rc); m=184/266; ncol2=11; w=0; offset=3; strand=R; shift=12; score= 419; ------------sCACGTgss-- ; cor=0.870; Ncor=0.559; logoDP=0.549; NsEucl=0.917; NSW=0.938; rcor=189; rNcor=507; rlogoDP=934; rNsEucl=259; rNSW=206; rank_mean=419.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 21 2 94 1 19 7 15 22 21 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 26 93 0 83 3 14 13 26 29 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 34 4 4 0 76 10 52 30 27 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 19 1 2 16 2 69 20 22 23 0 0

bZIP16.ampDAP_M0197_AthalianaCistrome_rc_shift10 (bZIP16.ampDAP:M0197:AthalianaCistrome_rc) 0.809 0.658 1.044 0.922 0.921 461 177 844 200 414 419.200
; assembly_6 versus bZIP16.ampDAP_M0197_AthalianaCistrome_rc (bZIP16.ampDAP:M0197:AthalianaCistrome_rc); m=185/266; ncol2=7; w=0; offset=1; strand=R; shift=10; score= 419.2; ----------TGCCACG------ ; cor=0.809; Ncor=0.658; logoDP=1.044; NsEucl=0.922; NSW=0.921; rcor=461; rNcor=177; rlogoDP=844; rNsEucl=200; rNSW=414; rank_mean=419.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 27 0 89 0 597 0 5 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 90 0 508 597 0 592 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 41 539 0 0 0 0 592 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 439 58 0 0 0 5 0 0 0 0 0 0 0

GBF6.ampDAP_M0222_AthalianaCistrome_shift7 (GBF6.ampDAP:M0222:AthalianaCistrome) 0.753 0.612 6.792 0.915 0.906 755 300 173 293 581 420.400
; assembly_6 versus GBF6.ampDAP_M0222_AthalianaCistrome (GBF6.ampDAP:M0222:AthalianaCistrome); m=186/266; ncol2=11; w=-2; offset=-2; strand=D; shift=7; score= 420.4; -------dwwgmTgACGT----- ; cor=0.753; Ncor=0.612; logoDP=6.792; NsEucl=0.915; NSW=0.906; rcor=755; rNcor=300; rlogoDP=173; rNsEucl=293; rNSW=581; rank_mean=420.400; match_rank= a 0 0 0 0 0 0 0 185 183 146 80 155 89 6 533 0 6 1 0 0 0 0 0 c 0 0 0 0 0 0 0 52 86 55 23 205 57 107 0 533 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 143 86 78 300 120 6 359 0 0 527 0 0 0 0 0 0 t 0 0 0 0 0 0 0 153 178 254 130 53 381 61 0 0 0 532 0 0 0 0 0

BZIP86_Mo17_1_EEAD0303_EEADannot_shift11 (BZIP86_Mo17_1:EEAD0303:EEADannot) 0.787 0.618 4.922 0.911 0.913 567 278 403 363 494 421.000
; assembly_6 versus BZIP86_Mo17_1_EEAD0303_EEADannot (BZIP86_Mo17_1:EEAD0303:EEADannot); m=187/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 421; -----------GCCACGTsrb-- ; cor=0.787; Ncor=0.618; logoDP=4.922; NsEucl=0.911; NSW=0.913; rcor=567; rNcor=278; rlogoDP=403; rNsEucl=363; rNSW=494; rank_mean=421.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 19 0 91 3 9 0 6 59 8 0 0 c 0 0 0 0 0 0 0 0 0 0 0 5 78 100 7 81 11 5 65 5 33 0 0 g 0 0 0 0 0 0 0 0 0 0 0 80 0 0 0 3 77 0 28 28 34 0 0 t 0 0 0 0 0 0 0 0 0 0 0 12 3 0 2 13 3 95 1 8 25 0 0

At4g17880_MA0569.1_JASPAR_shift12 (At4g17880:MA0569.1:JASPAR) 0.855 0.488 6.798 0.901 0.921 245 763 172 580 406 433.200
; assembly_6 versus At4g17880_MA0569.1_JASPAR (At4g17880:MA0569.1:JASPAR); m=188/266; ncol2=15; w=0; offset=3; strand=D; shift=12; score= 433.2; ------------rCACGTGC--- ; cor=0.855; Ncor=0.488; logoDP=6.798; NsEucl=0.901; NSW=0.921; rcor=245; rNcor=763; rlogoDP=172; rNsEucl=580; rNSW=406; rank_mean=433.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 38 5 99 0 2 0 0 2 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 18 95 0 94 0 1 0 72 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 98 0 98 8 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 8 0 1 6 0 99 2 17 0 0 0

BHLH49_MA1740.2_JASPAR_shift13 (BHLH49:MA1740.2:JASPAR) 0.885 0.443 7.578 0.896 0.924 144 918 79 678 373 438.400
; assembly_6 versus BHLH49_MA1740.2_JASPAR (BHLH49:MA1740.2:JASPAR); m=189/266; ncol2=8; w=0; offset=4; strand=D; shift=13; score= 438.4; -------------CACGTGC--- ; cor=0.885; Ncor=0.443; logoDP=7.578; NsEucl=0.896; NSW=0.924; rcor=144; rNcor=918; rlogoDP=79; rNsEucl=678; rNSW=373; rank_mean=438.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1000 0 0 0 0 90 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 1000 0 1000 0 0 0 809 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1000 0 1000 83 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1000 0 18 0 0 0

BAM8.ampDAP_M0155_AthalianaCistrome_shift7 (BAM8.ampDAP:M0155:AthalianaCistrome) 0.748 0.608 7.516 0.912 0.898 781 314 85 350 664 438.800
; assembly_6 versus BAM8.ampDAP_M0155_AthalianaCistrome (BAM8.ampDAP:M0155:AthalianaCistrome); m=190/266; ncol2=15; w=-2; offset=-2; strand=D; shift=7; score= 438.8; -------arttsrCACGTGTsr- ; cor=0.748; Ncor=0.608; logoDP=7.516; NsEucl=0.912; NSW=0.898; rcor=781; rNcor=314; rlogoDP=85; rNsEucl=350; rNSW=664; rank_mean=438.800; match_rank= a 0 0 0 0 0 0 0 208 151 67 126 44 296 0 590 0 0 0 0 37 19 317 0 c 0 0 0 0 0 0 0 146 132 129 87 268 0 564 0 590 0 2 0 81 161 7 0 g 0 0 0 0 0 0 0 131 166 114 72 174 289 0 0 0 590 0 590 44 397 188 0 t 0 0 0 0 0 0 0 105 141 280 305 104 5 26 0 0 0 588 0 428 13 78 0

BHLH57_ZmJAM1_Mo17_1_EEAD0227_EEADannot_rc_shift5 (BHLH57_ZmJAM1_Mo17_1:EEAD0227:EEADannot_rc) 0.842 0.515 0.997 0.924 0.937 291 664 857 169 215 439.200
; assembly_6 versus BHLH57_ZmJAM1_Mo17_1_EEAD0227_EEADannot_rc (BHLH57_ZmJAM1_Mo17_1:EEAD0227:EEADannot_rc); m=191/266; ncol2=14; w=-4; offset=-4; strand=R; shift=5; score= 439.2; -----wwwWwwrrCACGTG---- ; cor=0.842; Ncor=0.515; logoDP=0.997; NsEucl=0.924; NSW=0.937; rcor=291; rNcor=664; rlogoDP=857; rNsEucl=169; rNSW=215; rank_mean=439.200; match_rank= a 0 0 0 0 0 47 55 47 28 31 30 38 29 1 100 0 24 0 0 0 0 0 0 c 0 0 0 0 0 15 4 1 0 7 12 21 16 99 0 99 0 0 0 0 0 0 0 g 0 0 0 0 0 10 5 2 0 6 15 26 38 0 0 0 76 0 94 0 0 0 0 t 0 0 0 0 0 28 36 50 72 56 43 15 17 0 0 1 0 100 6 0 0 0 0

BHLH57_ZmJAM1_B73_1_m1_EEAD0226_EEADannot_rc_shift6 (BHLH57_ZmJAM1_B73_1_m1:EEAD0226:EEADannot_rc) 0.839 0.543 0.598 0.924 0.936 306 561 926 178 226 439.400
; assembly_6 versus BHLH57_ZmJAM1_B73_1_m1_EEAD0226_EEADannot_rc (BHLH57_ZmJAM1_B73_1_m1:EEAD0226:EEADannot_rc); m=192/266; ncol2=11; w=-3; offset=-3; strand=R; shift=6; score= 439.4; ------wwwwwarCACG------ ; cor=0.839; Ncor=0.543; logoDP=0.598; NsEucl=0.924; NSW=0.936; rcor=306; rNcor=561; rlogoDP=926; rNsEucl=178; rNSW=226; rank_mean=439.400; match_rank= a 0 0 0 0 0 0 61 48 32 30 37 43 36 1 100 0 18 0 0 0 0 0 0 c 0 0 0 0 0 0 4 1 1 7 14 21 11 99 0 95 0 0 0 0 0 0 0 g 0 0 0 0 0 0 2 0 0 7 13 24 41 0 0 0 82 0 0 0 0 0 0 t 0 0 0 0 0 0 33 51 67 56 36 12 12 0 0 5 0 0 0 0 0 0 0

bHLH34_MA0962.2_JASPAR_shift12 (bHLH34:MA0962.2:JASPAR) 0.876 0.438 6.162 0.900 0.930 165 933 222 595 294 441.800
; assembly_6 versus bHLH34_MA0962.2_JASPAR (bHLH34:MA0962.2:JASPAR); m=193/266; ncol2=11; w=0; offset=3; strand=D; shift=12; score= 441.8; ------------gCACGTG---- ; cor=0.876; Ncor=0.438; logoDP=6.162; NsEucl=0.900; NSW=0.930; rcor=165; rNcor=933; rlogoDP=222; rNsEucl=595; rNSW=294; rank_mean=441.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 154 0 727 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 39 999 0 848 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 653 0 242 0 999 0 999 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 154 0 31 152 0 999 0 0 0 0 0

ABF4_MA1659.2_JASPAR_rc_shift13 (ABF4:MA1659.2:JASPAR_rc) 0.912 0.456 0.893 0.917 0.952 90 868 876 262 123 443.800
; assembly_6 versus ABF4_MA1659.2_JASPAR_rc (ABF4:MA1659.2:JASPAR_rc); m=194/266; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 443.8; -------------sACGTGG--- ; cor=0.912; Ncor=0.456; logoDP=0.893; NsEucl=0.917; NSW=0.952; rcor=90; rNcor=868; rlogoDP=876; rNsEucl=262; rNSW=123; rank_mean=443.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 253 5815 200 161 73 62 155 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 1825 52 5470 44 47 86 62 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 3358 58 166 5666 20 5763 5169 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 610 121 210 175 5906 135 660 0 0 0

BHLH91_MYC2B_B73_1_m1_EEAD0234_EEADannot_shift4 (BHLH91_MYC2B_B73_1_m1:EEAD0234:EEADannot) 0.823 0.433 5.290 0.917 0.930 377 948 335 269 292 444.200
; assembly_6 versus BHLH91_MYC2B_B73_1_m1_EEAD0234_EEADannot (BHLH91_MYC2B_B73_1_m1:EEAD0234:EEADannot); m=195/266; ncol2=10; w=-5; offset=-5; strand=D; shift=4; score= 444.2; ----mayrwkwaaC--------- ; cor=0.823; Ncor=0.433; logoDP=5.290; NsEucl=0.917; NSW=0.930; rcor=377; rNcor=948; rlogoDP=335; rNsEucl=269; rNSW=292; rank_mean=444.200; match_rank= a 0 0 0 0 25 53 18 47 30 14 30 57 57 23 0 0 0 0 0 0 0 0 0 c 0 0 0 0 47 12 43 2 6 6 8 12 16 77 0 0 0 0 0 0 0 0 0 g 0 0 0 0 12 17 4 34 1 27 14 7 17 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 16 18 35 17 63 53 48 24 10 0 0 0 0 0 0 0 0 0 0

BIM1.DAP_M0169_AthalianaCistrome_rc_shift5 (BIM1.DAP:M0169:AthalianaCistrome_rc) 0.885 0.491 0.260 0.925 0.944 147 746 1032 161 157 448.600
; assembly_6 versus BIM1.DAP_M0169_AthalianaCistrome_rc (BIM1.DAP:M0169:AthalianaCistrome_rc); m=196/266; ncol2=18; w=-4; offset=-4; strand=R; shift=5; score= 448.6; -----gkgrrwgTCACGTG---- ; cor=0.885; Ncor=0.491; logoDP=0.260; NsEucl=0.925; NSW=0.944; rcor=147; rNcor=746; rlogoDP=1032; rNsEucl=161; rNSW=157; rank_mean=448.600; match_rank= a 0 0 0 0 0 135 87 141 164 213 178 125 28 0 566 0 0 0 0 0 0 0 0 c 0 0 0 0 0 62 88 71 110 58 77 67 9 566 0 563 0 0 0 0 0 0 0 g 0 0 0 0 0 249 151 265 173 164 130 371 121 0 0 0 566 0 566 0 0 0 0 t 0 0 0 0 0 120 240 89 119 131 181 3 408 0 0 3 0 566 0 0 0 0 0

GBF2_M0266_1.02_CISBP_shift11 (GBF2:M0266_1.02:CISBP) 0.851 0.547 2.403 0.908 0.924 257 546 727 421 368 463.800
; assembly_6 versus GBF2_M0266_1.02_CISBP (GBF2:M0266_1.02:CISBP); m=197/266; ncol2=12; w=0; offset=2; strand=D; shift=11; score= 463.8; -----------kmCAcgtvr--- ; cor=0.851; Ncor=0.547; logoDP=2.403; NsEucl=0.908; NSW=0.924; rcor=257; rNcor=546; rlogoDP=727; rNsEucl=421; rNSW=368; rank_mean=463.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 12 37 3 94 9 14 14 25 31 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 17 50 88 0 59 20 18 28 14 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 43 12 0 6 22 59 14 29 35 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 28 1 9 0 10 7 54 18 20 0 0 0

AL4G45550.t1_BZIP_1_AT2G46270_EEAD0590_EEADannot_rc_shift9 (AL4G45550.t1_BZIP_1_AT2G46270:EEAD0590:EEADannot_rc) 0.781 0.725 0.916 0.917 0.910 611 63 872 263 523 466.400
; assembly_6 versus AL4G45550.t1_BZIP_1_AT2G46270_EEAD0590_EEADannot_rc (AL4G45550.t1_BZIP_1_AT2G46270:EEAD0590:EEADannot_rc); m=198/266; ncol2=8; w=0; offset=0; strand=R; shift=9; score= 466.4; ---------wkctsACG------ ; cor=0.781; Ncor=0.725; logoDP=0.916; NsEucl=0.917; NSW=0.910; rcor=611; rNcor=63; rlogoDP=872; rNsEucl=263; rNSW=523; rank_mean=466.400; match_rank= a 0 0 0 0 0 0 0 0 0 25 8 23 18 2 100 0 2 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 7 4 45 23 30 0 99 2 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 5 62 20 0 57 0 0 96 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 63 26 12 59 11 0 1 0 0 0 0 0 0 0

BHLH49_MA1740.1_JASPAR_shift11 (BHLH49:MA1740.1:JASPAR) 0.790 0.564 7.582 0.899 0.899 555 487 78 609 660 477.800
; assembly_6 versus BHLH49_MA1740.1_JASPAR (BHLH49:MA1740.1:JASPAR); m=199/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 477.8; -----------arCACGTGCc-- ; cor=0.790; Ncor=0.564; logoDP=7.582; NsEucl=0.899; NSW=0.899; rcor=555; rNcor=487; rlogoDP=78; rNsEucl=609; rNSW=660; rank_mean=477.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 304 299 0.04 1000 0.04 0.04 0.04 0.04 90 212.5 0 0 c 0 0 0 0 0 0 0 0 0 0 0 232 135 1000 0.04 1000 0.04 0.04 0.04 808.94 338 0 0 g 0 0 0 0 0 0 0 0 0 0 0 232 360 0.04 0.04 0.04 1000 0.04 1000 83 237 0 0 t 0 0 0 0 0 0 0 0 0 0 0 232 206 0 0 0 0 1000 0 18 212 0 0

BES1_MA0549.1_JASPAR_rc_shift10 (BES1:MA0549.1:JASPAR_rc) 0.804 0.631 0.889 0.913 0.916 483 237 878 337 468 480.600
; assembly_6 versus BES1_MA0549.1_JASPAR_rc (BES1:MA0549.1:JASPAR_rc); m=200/266; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 480.6; ----------bsmCACGTGyg-- ; cor=0.804; Ncor=0.631; logoDP=0.889; NsEucl=0.913; NSW=0.916; rcor=483; rNcor=237; rlogoDP=878; rNsEucl=337; rNSW=468; rank_mean=480.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 1 3 42 0 99 0 0 6 0 0 21 0 0 c 0 0 0 0 0 0 0 0 0 0 33 46 36 96 0 99 0 4 0 50 10 0 0 g 0 0 0 0 0 0 0 0 0 0 29 33 5 0 0 0 99 0 99 8 45 0 0 t 0 0 0 0 0 0 0 0 0 0 36 17 16 3 0 0 0 89 0 41 23 0 0

PK18474.1_M0149_1.02_CISBP_shift13 (PK18474.1:M0149_1.02:CISBP) 0.895 0.447 2.452 0.906 0.938 125 903 723 469 209 485.800
; assembly_6 versus PK18474.1_M0149_1.02_CISBP (PK18474.1:M0149_1.02:CISBP); m=201/266; ncol2=15; w=0; offset=4; strand=D; shift=13; score= 485.8; -------------caCGTGc--- ; cor=0.895; Ncor=0.447; logoDP=2.452; NsEucl=0.906; NSW=0.938; rcor=125; rNcor=903; rlogoDP=723; rNsEucl=469; rNSW=209; rank_mean=485.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 24 62 7 19 2 17 14 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 54 8 73 0 13 1 45 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 13 12 0 77 0 76 21 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 9 18 20 4 85 6 20 0 0 0

LOC_Os01g46970.1_BZIP_1_AT2G46270_EEAD0622_EEADannot_rc_shift11 (LOC_Os01g46970.1_BZIP_1_AT2G46270:EEAD0622:EEADannot_rc) 0.804 0.632 0.899 0.911 0.913 480 236 874 367 496 490.600
; assembly_6 versus LOC_Os01g46970.1_BZIP_1_AT2G46270_EEAD0622_EEADannot_rc (LOC_Os01g46970.1_BZIP_1_AT2G46270:EEAD0622:EEADannot_rc); m=202/266; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 490.6; -----------GCCACGTsagm- ; cor=0.804; Ncor=0.632; logoDP=0.899; NsEucl=0.911; NSW=0.913; rcor=480; rNcor=236; rlogoDP=874; rNsEucl=367; rNSW=496; rank_mean=490.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 21 0 100 0 1 0 11 58 10 32 0 c 0 0 0 0 0 0 0 0 0 0 0 0 79 100 0 95 1 0 58 0 22 58 0 g 0 0 0 0 0 0 0 0 0 0 0 79 0 0 0 1 98 0 31 20 48 3 0 t 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 4 0 100 0 22 20 7 0

GLYMA-08G357600_UN0420.1_JASPAR_rc_shift9 (GLYMA-08G357600:UN0420.1:JASPAR_rc) 0.818 0.584 0.288 0.915 0.927 410 414 1008 302 327 492.200
; assembly_6 versus GLYMA-08G357600_UN0420.1_JASPAR_rc (GLYMA-08G357600:UN0420.1:JASPAR_rc); m=203/266; ncol2=8; w=0; offset=0; strand=R; shift=9; score= 492.2; ---------dwGACACG------ ; cor=0.818; Ncor=0.584; logoDP=0.288; NsEucl=0.915; NSW=0.927; rcor=410; rNcor=414; rlogoDP=1008; rNsEucl=302; rNSW=327; rank_mean=492.200; match_rank= a 0 0 0 0 0 0 0 0 0 1880 1663 52 5554 81 5525 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 1209 1558 0 525 5839 124 6412 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 1654 1368 6073 134 191 547 1 6396 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 1670 1824 288 200 302 217 0 17 0 0 0 0 0 0

BZIP2_DLF1_B73_2_m1_EEAD0268_EEADannot_shift7 (BZIP2_DLF1_B73_2_m1:EEAD0268:EEADannot) 0.739 0.601 6.686 0.909 0.893 818 348 183 402 719 494.000
; assembly_6 versus BZIP2_DLF1_B73_2_m1_EEAD0268_EEADannot (BZIP2_DLF1_B73_2_m1:EEAD0268:EEADannot); m=204/266; ncol2=7; w=-2; offset=-2; strand=D; shift=7; score= 494; -------rrtGvTG--------- ; cor=0.739; Ncor=0.601; logoDP=6.686; NsEucl=0.909; NSW=0.893; rcor=818; rNcor=348; rlogoDP=183; rNsEucl=402; rNSW=719; rank_mean=494.000; match_rank= a 0 0 0 0 0 0 0 28 31 15 7 31 13 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 18 19 18 8 26 11 20 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 40 36 21 76 36 2 76 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 14 14 46 9 7 74 4 0 0 0 0 0 0 0 0 0

BHLH3_MA0957.1_JASPAR_shift12 (BHLH3:MA0957.1:JASPAR) 0.836 0.478 5.724 0.897 0.916 319 790 265 643 466 496.600
; assembly_6 versus BHLH3_MA0957.1_JASPAR (BHLH3:MA0957.1:JASPAR); m=205/266; ncol2=10; w=0; offset=3; strand=D; shift=12; score= 496.6; ------------rCACGTGy--- ; cor=0.836; Ncor=0.478; logoDP=5.724; NsEucl=0.897; NSW=0.916; rcor=319; rNcor=790; rlogoDP=265; rNsEucl=643; rNSW=466; rank_mean=496.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 258 45 950 10 42 22 11 44 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 94 930 7 937 12 20 14 603 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 603 14 20 12 937 7 930 94 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 44 11 22 42 10 950 45 258 0 0 0

GBF3_MA1351.1_JASPAR_rc_shift7 (GBF3:MA1351.1:JASPAR_rc) 0.782 0.636 1.122 0.916 0.908 598 225 832 281 552 497.600
; assembly_6 versus GBF3_MA1351.1_JASPAR_rc (GBF3:MA1351.1:JASPAR_rc); m=206/266; ncol2=7; w=-2; offset=-2; strand=R; shift=7; score= 497.6; -------dwwksts--------- ; cor=0.782; Ncor=0.636; logoDP=1.122; NsEucl=0.916; NSW=0.908; rcor=598; rNcor=225; rlogoDP=832; rNsEucl=281; rNSW=552; rank_mean=497.600; match_rank= a 0 0 0 0 0 0 0 204 228 181 29 143 70 2 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 54 67 39 12 251 134 170 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 169 114 72 394 166 0 374 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 169 187 304 161 36 392 50 0 0 0 0 0 0 0 0 0

BHLH149_MYC2A_Mo17_1_EEAD0216_EEADannot_rc_shift5 (BHLH149_MYC2A_Mo17_1:EEAD0216:EEADannot_rc) 0.841 0.467 0.604 0.920 0.936 294 834 924 226 224 500.400
; assembly_6 versus BHLH149_MYC2A_Mo17_1_EEAD0216_EEADannot_rc (BHLH149_MYC2A_Mo17_1:EEAD0216:EEADannot_rc); m=207/266; ncol2=13; w=-4; offset=-4; strand=R; shift=5; score= 500.4; -----wwwWwwarCAyGT----- ; cor=0.841; Ncor=0.467; logoDP=0.604; NsEucl=0.920; NSW=0.936; rcor=294; rNcor=834; rlogoDP=924; rNsEucl=226; rNSW=224; rank_mean=500.400; match_rank= a 0 0 0 0 0 53 51 50 27 34 39 52 53 6 100 0 11 1 0 0 0 0 0 c 0 0 0 0 0 12 9 1 1 6 10 17 16 94 0 62 0 1 0 0 0 0 0 g 0 0 0 0 0 10 2 3 0 6 10 14 25 0 0 0 89 0 0 0 0 0 0 t 0 0 0 0 0 25 38 46 72 54 41 17 6 0 0 38 0 98 0 0 0 0 0

BZIP91_B73_1_m1_EEAD0309_EEADannot_shift11 (BZIP91_B73_1_m1:EEAD0309:EEADannot) 0.764 0.600 5.435 0.905 0.900 704 351 305 499 646 501.000
; assembly_6 versus BZIP91_B73_1_m1_EEAD0309_EEADannot (BZIP91_B73_1_m1:EEAD0309:EEADannot); m=208/266; ncol2=13; w=0; offset=2; strand=D; shift=11; score= 501; -----------rTGACGTGKcm- ; cor=0.764; Ncor=0.600; logoDP=5.435; NsEucl=0.905; NSW=0.900; rcor=704; rNcor=351; rlogoDP=305; rNsEucl=499; rNSW=646; rank_mean=501.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 39 4 1 94 0 8 1 2 2 18 42 0 c 0 0 0 0 0 0 0 0 0 0 0 10 15 16 0 97 0 4 1 4 67 26 0 g 0 0 0 0 0 0 0 0 0 0 0 42 4 79 5 1 92 1 95 68 7 20 0 t 0 0 0 0 0 0 0 0 0 0 0 9 77 4 1 2 0 94 2 26 8 12 0

BZIP86_B73_1_m1_EEAD0302_EEADannot_rc_shift11 (BZIP86_B73_1_m1:EEAD0302:EEADannot_rc) 0.793 0.623 1.014 0.911 0.913 537 271 848 365 495 503.200
; assembly_6 versus BZIP86_B73_1_m1_EEAD0302_EEADannot_rc (BZIP86_B73_1_m1:EEAD0302:EEADannot_rc); m=209/266; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 503.2; -----------GCCACGTsrgC- ; cor=0.793; Ncor=0.623; logoDP=1.014; NsEucl=0.911; NSW=0.913; rcor=537; rNcor=271; rlogoDP=848; rNsEucl=365; rNSW=495; rank_mean=503.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 2 20 0 100 4 12 1 8 53 10 21 0 c 0 0 0 0 0 0 0 0 0 0 0 1 80 100 0 88 8 12 61 3 23 69 0 g 0 0 0 0 0 0 0 0 0 0 0 87 0 0 0 2 80 0 29 35 43 4 0 t 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 6 0 87 2 9 24 6 0

RAP-1_MA0566.1_JASPAR_shift12 (RAP-1:MA0566.1:JASPAR) 0.831 0.475 5.631 0.897 0.916 348 804 270 644 467 506.600
; assembly_6 versus RAP-1_MA0566.1_JASPAR (RAP-1:MA0566.1:JASPAR); m=210/266; ncol2=7; w=0; offset=3; strand=D; shift=12; score= 506.6; ------------rCACGTG---- ; cor=0.831; Ncor=0.475; logoDP=5.631; NsEucl=0.897; NSW=0.916; rcor=348; rNcor=804; rlogoDP=270; rNsEucl=644; rNSW=467; rank_mean=506.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 25 9 97 0 15 1 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 10 91 0 85 0 2 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 60 0 2 0 85 0 91 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 5 0 1 15 0 97 9 0 0 0 0

BHLH104_MA0960.1_JASPAR_shift11 (BHLH104:MA0960.1:JASPAR) 0.800 0.572 7.945 0.893 0.885 503 458 52 733 806 510.400
; assembly_6 versus BHLH104_MA0960.1_JASPAR (BHLH104:MA0960.1:JASPAR); m=211/266; ncol2=11; w=0; offset=2; strand=D; shift=11; score= 510.4; -----------GGCACGTGCC-- ; cor=0.800; Ncor=0.572; logoDP=7.945; NsEucl=0.893; NSW=0.885; rcor=503; rNcor=458; rlogoDP=52; rNsEucl=733; rNSW=806; rank_mean=510.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 130 15 6 996 0 1 0 0 45 22 0 0 c 0 0 0 0 0 0 0 0 0 0 0 26 74 994 0 999 0 4 0 866 822 0 0 g 0 0 0 0 0 0 0 0 0 0 0 822 866 0 4 0 999 0 994 74 26 0 0 t 0 0 0 0 0 0 0 0 0 0 0 22 45 0 0 1 0 996 6 15 130 0 0

BIM3.DAP_M0174_AthalianaCistrome_rc_shift11 (BIM3.DAP:M0174:AthalianaCistrome_rc) 0.825 0.495 0.432 0.923 0.928 369 729 957 189 311 511.000
; assembly_6 versus BIM3.DAP_M0174_AthalianaCistrome_rc (BIM3.DAP:M0174:AthalianaCistrome_rc); m=212/266; ncol2=11; w=0; offset=2; strand=R; shift=11; score= 511; -----------gkCACGTGasw- ; cor=0.825; Ncor=0.495; logoDP=0.432; NsEucl=0.923; NSW=0.928; rcor=369; rNcor=729; rlogoDP=957; rNsEucl=189; rNSW=311; rank_mean=511.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 33 13 0 137 0 0 0 0 80 2 48 0 c 0 0 0 0 0 0 0 0 0 0 0 20 11 137 0 137 0 0 0 32 59 24 0 g 0 0 0 0 0 0 0 0 0 0 0 80 36 0 0 0 137 0 137 16 48 28 0 t 0 0 0 0 0 0 0 0 0 0 0 4 77 0 0 0 0 137 0 9 28 37 0

AtbZIP63_M0272_1.02_CISBP_rc_shift11 (AtbZIP63:M0272_1.02:CISBP_rc) 0.754 0.646 1.754 0.913 0.910 750 201 766 317 524 511.600
; assembly_6 versus AtbZIP63_M0272_1.02_CISBP_rc (AtbZIP63:M0272_1.02:CISBP_rc); m=213/266; ncol2=11; w=0; offset=2; strand=R; shift=11; score= 511.6; -----------gcCACGTsagc- ; cor=0.754; Ncor=0.646; logoDP=1.754; NsEucl=0.913; NSW=0.910; rcor=750; rNcor=201; rlogoDP=766; rNsEucl=317; rNSW=524; rank_mean=511.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 23 20 5 94 0 0 0 0 66 19 20 0 c 0 0 0 0 0 0 0 0 0 0 0 23 60 78 2 100 0 0 64 2 19 40 0 g 0 0 0 0 0 0 0 0 0 0 0 31 6 12 2 0 100 0 36 15 43 20 0 t 0 0 0 0 0 0 0 0 0 0 0 23 14 5 2 0 0 100 0 17 19 20 0

BHLH13_MA0958.1_JASPAR_shift12 (BHLH13:MA0958.1:JASPAR) 0.834 0.477 6.838 0.893 0.909 330 795 166 726 544 512.200
; assembly_6 versus BHLH13_MA0958.1_JASPAR (BHLH13:MA0958.1:JASPAR); m=214/266; ncol2=9; w=0; offset=3; strand=D; shift=12; score= 512.2; ------------rCACGTGC--- ; cor=0.834; Ncor=0.477; logoDP=6.838; NsEucl=0.893; NSW=0.909; rcor=330; rNcor=795; rlogoDP=166; rNsEucl=726; rNSW=544; rank_mean=512.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 295 53 992 1 15 4 1 38 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 116 945 2 952 1 4 2 696 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 569 1 3 1 982 1 987 65 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 20 1 4 46 1 991 10 201 0 0 0

bHLH104_M0159_1.02_CISBP_shift11 (bHLH104:M0159_1.02:CISBP) 0.799 0.571 7.981 0.892 0.884 506 462 47 740 811 513.200
; assembly_6 versus bHLH104_M0159_1.02_CISBP (bHLH104:M0159_1.02:CISBP); m=215/266; ncol2=11; w=0; offset=2; strand=D; shift=11; score= 513.2; -----------GGCACGTGCC-- ; cor=0.799; Ncor=0.571; logoDP=7.981; NsEucl=0.892; NSW=0.884; rcor=506; rNcor=462; rlogoDP=47; rNsEucl=740; rNSW=811; rank_mean=513.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 13 2 1 100 0 0 0 0 4 2 0 0 c 0 0 0 0 0 0 0 0 0 0 0 3 7 99 0 100 0 0 0 87 82 0 0 g 0 0 0 0 0 0 0 0 0 0 0 82 87 0 0 0 100 0 99 7 3 0 0 t 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 100 1 2 13 0 0

BZIP68_ZmABF2_B73_1_m1_EEAD0292_EEADannot_rc_shift11 (BZIP68_ZmABF2_B73_1_m1:EEAD0292:EEADannot_rc) 0.796 0.626 1.007 0.909 0.909 518 263 852 410 543 517.200
; assembly_6 versus BZIP68_ZmABF2_B73_1_m1_EEAD0292_EEADannot_rc (BZIP68_ZmABF2_B73_1_m1:EEAD0292:EEADannot_rc); m=216/266; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 517.2; -----------GCCACGTsabC- ; cor=0.796; Ncor=0.626; logoDP=1.007; NsEucl=0.909; NSW=0.909; rcor=518; rNcor=263; rlogoDP=852; rNsEucl=410; rNSW=543; rank_mean=517.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 18 0 99 0 2 1 4 58 9 9 0 c 0 0 0 0 0 0 0 0 0 0 0 0 82 100 1 93 10 1 59 2 31 77 0 g 0 0 0 0 0 0 0 0 0 0 0 90 0 0 0 0 88 0 36 16 26 8 0 t 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 7 0 98 1 24 34 6 0

BAM8.DAP_M0154_AthalianaCistrome_shift10 (BAM8.DAP:M0154:AthalianaCistrome) 0.727 0.591 7.427 0.907 0.888 900 386 95 442 777 520.000
; assembly_6 versus BAM8.DAP_M0154_AthalianaCistrome (BAM8.DAP:M0154:AthalianaCistrome); m=217/266; ncol2=8; w=0; offset=1; strand=D; shift=10; score= 520; ----------yCACACGT----- ; cor=0.727; Ncor=0.591; logoDP=7.427; NsEucl=0.907; NSW=0.888; rcor=900; rNcor=386; rlogoDP=95; rNsEucl=442; rNSW=777; rank_mean=520.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 34 19 417 0 599 2 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 206 499 37 599 0 598 0 10 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 5 42 139 0 1 0 600 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 355 40 7 1 0 0 0 590 0 0 0 0 0

BHLH106_ZmBIM2_Mo17_1_EEAD0208_EEADannot_rc_shift5 (BHLH106_ZmBIM2_Mo17_1:EEAD0208:EEADannot_rc) 0.817 0.500 0.747 0.917 0.924 412 716 899 261 366 530.800
; assembly_6 versus BHLH106_ZmBIM2_Mo17_1_EEAD0208_EEADannot_rc (BHLH106_ZmBIM2_Mo17_1:EEAD0208:EEADannot_rc); m=218/266; ncol2=22; w=-4; offset=-4; strand=R; shift=5; score= 530.8; -----ryGcvbskCACGTGm--- ; cor=0.817; Ncor=0.500; logoDP=0.747; NsEucl=0.917; NSW=0.924; rcor=412; rNcor=716; rlogoDP=899; rNsEucl=261; rNSW=366; rank_mean=530.800; match_rank= a 0 0 0 0 0 27 8 5 14 29 19 19 8 0 98 0 0 0 0 44 0 0 0 c 0 0 0 0 0 15 32 11 44 27 25 32 11 100 0 100 0 0 0 41 0 0 0 g 0 0 0 0 0 48 12 76 20 26 30 35 39 0 2 0 100 0 100 6 0 0 0 t 0 0 0 0 0 10 48 8 22 18 26 14 42 0 0 0 0 100 0 9 0 0 0

BZIP63_MA1745.2_JASPAR_shift12 (BZIP63:MA1745.2:JASPAR) 0.822 0.470 5.603 0.895 0.911 383 825 276 702 509 539.000
; assembly_6 versus BZIP63_MA1745.2_JASPAR (BZIP63:MA1745.2:JASPAR); m=219/266; ncol2=11; w=0; offset=3; strand=D; shift=12; score= 539; ------------tsACGTGg--- ; cor=0.822; Ncor=0.470; logoDP=5.603; NsEucl=0.895; NSW=0.911; rcor=383; rNcor=825; rlogoDP=276; rNsEucl=702; rNSW=509; rank_mean=539.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 166 0 1000 0 0 21 47 139 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 148 356 0 1000 0 21 123 62 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 21 644 0 0 1000 21 783 598 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 665 0 0 0 0 937 47 201 0 0 0

HBI1_MA1025.2_JASPAR_rc_shift13 (HBI1:MA1025.2:JASPAR_rc) 0.889 0.444 0.611 0.902 0.933 136 914 921 556 258 557.000
; assembly_6 versus HBI1_MA1025.2_JASPAR_rc (HBI1:MA1025.2:JASPAR_rc); m=220/266; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 557; -------------CACGTGC--- ; cor=0.889; Ncor=0.444; logoDP=0.611; NsEucl=0.902; NSW=0.933; rcor=136; rNcor=914; rlogoDP=921; rNsEucl=556; rNSW=258; rank_mean=557.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 21 936 0 95 0 0 108 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 936 21 1000 0 0 0 762 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 21 21 0 904 0 1000 106 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 21 21 0 0 1000 0 24 0 0 0

BZIP91_Mo17_1_EEAD0310_EEADannot_shift11 (BZIP91_Mo17_1:EEAD0310:EEADannot) 0.772 0.551 4.980 0.900 0.899 660 532 393 602 655 568.400
; assembly_6 versus BZIP91_Mo17_1_EEAD0310_EEADannot (BZIP91_Mo17_1:EEAD0310:EEADannot); m=221/266; ncol2=11; w=0; offset=2; strand=D; shift=11; score= 568.4; -----------gmCACGTCAy-- ; cor=0.772; Ncor=0.551; logoDP=4.980; NsEucl=0.900; NSW=0.899; rcor=660; rNcor=532; rlogoDP=393; rNsEucl=602; rNSW=655; rank_mean=568.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 10 40 0 90 0 6 0 5 71 10 0 0 c 0 0 0 0 0 0 0 0 0 0 0 17 54 97 0 93 3 6 75 4 40 0 0 g 0 0 0 0 0 0 0 0 0 0 0 56 4 0 8 2 90 2 20 23 9 0 0 t 0 0 0 0 0 0 0 0 0 0 0 17 2 3 2 5 1 92 0 2 41 0 0

GLYMA-08G357600_UN0420.2_JASPAR_shift14 (GLYMA-08G357600:UN0420.2:JASPAR) 0.850 0.425 4.420 0.893 0.920 262 980 459 724 418 568.600
; assembly_6 versus GLYMA-08G357600_UN0420.2_JASPAR (GLYMA-08G357600:UN0420.2:JASPAR); m=222/266; ncol2=11; w=0; offset=5; strand=D; shift=14; score= 568.6; --------------aCGTGTC-- ; cor=0.850; Ncor=0.425; logoDP=4.420; NsEucl=0.893; NSW=0.920; rcor=262; rNcor=980; rlogoDP=459; rNsEucl=724; rNSW=418; rank_mean=568.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3654 17 0 217 302 200 288 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 593 6396 1 547 191 134 6073 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1107 0 6412 124 5839 525 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1059 0 0 5525 81 5554 52 0 0

Carub.0004s2898.1.p_BZIP_1_AT2G46270_EEAD0611_EEADannot_rc_shift10 (Carub.0004s2898.1.p_BZIP_1_AT2G46270:EEAD0611:EEADannot_rc) 0.739 0.686 0.963 0.909 0.893 821 120 863 401 717 584.400
; assembly_6 versus Carub.0004s2898.1.p_BZIP_1_AT2G46270_EEAD0611_EEADannot_rc (Carub.0004s2898.1.p_BZIP_1_AT2G46270:EEAD0611:EEADannot_rc); m=223/266; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 584.4; ----------TKCCACGTCa--- ; cor=0.739; Ncor=0.686; logoDP=0.963; NsEucl=0.909; NSW=0.893; rcor=821; rNcor=120; rlogoDP=863; rNsEucl=401; rNSW=717; rank_mean=584.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 10 0 20 0 100 0 5 0 7 67 0 0 0 c 0 0 0 0 0 0 0 0 0 0 12 0 80 100 0 98 0 0 69 1 0 0 0 g 0 0 0 0 0 0 0 0 0 0 9 74 0 0 0 0 95 0 24 20 0 0 0 t 0 0 0 0 0 0 0 0 0 0 69 26 0 0 0 2 0 100 0 12 0 0 0

Solyc01g095460.3.1_BZIP_1_AT2G46270_EEAD0644_EEADannot_shift10 (Solyc01g095460.3.1_BZIP_1_AT2G46270:EEAD0644:EEADannot) 0.704 0.654 7.113 0.899 0.867 1065 182 134 619 957 591.400
; assembly_6 versus Solyc01g095460.3.1_BZIP_1_AT2G46270_EEAD0644_EEADannot (Solyc01g095460.3.1_BZIP_1_AT2G46270:EEAD0644:EEADannot); m=224/266; ncol2=11; w=0; offset=1; strand=D; shift=10; score= 591.4; ----------TGCCACGTCAk-- ; cor=0.704; Ncor=0.654; logoDP=7.113; NsEucl=0.899; NSW=0.867; rcor=1065; rNcor=182; rlogoDP=134; rNsEucl=619; rNSW=957; rank_mean=591.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 4 0 17 0 100 0 0 0 7 72 11 0 0 c 0 0 0 0 0 0 0 0 0 0 4 0 83 100 0 99 0 1 73 0 11 0 0 g 0 0 0 0 0 0 0 0 0 0 6 91 0 0 0 0 100 0 19 17 51 0 0 t 0 0 0 0 0 0 0 0 0 0 86 9 0 0 0 1 0 99 1 11 27 0 0

BHLH99_ZmJAM2_B73_1_m1_EEAD0236_EEADannot_shift4 (BHLH99_ZmJAM2_B73_1_m1:EEAD0236:EEADannot) 0.781 0.411 4.503 0.908 0.916 615 1036 448 420 465 596.800
; assembly_6 versus BHLH99_ZmJAM2_B73_1_m1_EEAD0236_EEADannot (BHLH99_ZmJAM2_B73_1_m1:EEAD0236:EEADannot); m=225/266; ncol2=10; w=-5; offset=-5; strand=D; shift=4; score= 596.8; ----cayrttwwaC--------- ; cor=0.781; Ncor=0.411; logoDP=4.503; NsEucl=0.908; NSW=0.916; rcor=615; rNcor=1036; rlogoDP=448; rNsEucl=420; rNSW=465; rank_mean=596.800; match_rank= a 0 0 0 0 23 59 2 43 24 11 26 55 54 24 0 0 0 0 0 0 0 0 0 c 0 0 0 0 59 8 49 6 8 0 4 8 16 76 0 0 0 0 0 0 0 0 0 g 0 0 0 0 7 13 1 43 1 24 12 6 12 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 11 20 48 8 67 65 58 31 18 0 0 0 0 0 0 0 0 0 0

HYH_MA1425.2_JASPAR_shift12 (HYH:MA1425.2:JASPAR) 0.827 0.414 5.740 0.886 0.908 356 1023 261 831 547 603.600
; assembly_6 versus HYH_MA1425.2_JASPAR (HYH:MA1425.2:JASPAR); m=226/266; ncol2=11; w=0; offset=3; strand=D; shift=12; score= 603.6; ------------wsACGTG---- ; cor=0.827; Ncor=0.414; logoDP=5.740; NsEucl=0.886; NSW=0.908; rcor=356; rNcor=1023; rlogoDP=261; rNsEucl=831; rNSW=547; rank_mean=603.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 283 23 999 0 0 0 48 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 72 350 0 999 0 0 154 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 72 523 0 0 999 0 747 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 571 102 0 0 0 999 48 0 0 0 0

BZIP2_DLF1_Mo17_1_EEAD0269_EEADannot_shift11 (BZIP2_DLF1_Mo17_1:EEAD0269:EEADannot) 0.738 0.580 6.819 0.893 0.873 828 427 168 732 912 613.400
; assembly_6 versus BZIP2_DLF1_Mo17_1_EEAD0269_EEADannot (BZIP2_DLF1_Mo17_1:EEAD0269:EEADannot); m=227/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 613.4; -----------GCCACGTCAy-- ; cor=0.738; Ncor=0.580; logoDP=6.819; NsEucl=0.893; NSW=0.873; rcor=828; rNcor=427; rlogoDP=168; rNsEucl=732; rNSW=912; rank_mean=613.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 1 20 0 100 0 4 0 3 79 5 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 80 100 0 99 6 0 79 0 38 0 0 g 0 0 0 0 0 0 0 0 0 0 0 94 0 0 0 0 90 0 18 8 19 0 0 t 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 1 0 100 0 13 38 0 0

Carub.0008s0285.1_BES1_1_AT5G45300_EEAD0619_EEADannot_shift11 (Carub.0008s0285.1_BES1_1_AT5G45300:EEAD0619:EEADannot) 0.733 0.576 6.959 0.893 0.874 869 439 154 725 899 617.200
; assembly_6 versus Carub.0008s0285.1_BES1_1_AT5G45300_EEAD0619_EEADannot (Carub.0008s0285.1_BES1_1_AT5G45300:EEAD0619:EEADannot); m=228/266; ncol2=8; w=0; offset=2; strand=D; shift=11; score= 617.2; -----------srCACGTG---- ; cor=0.733; Ncor=0.576; logoDP=6.959; NsEucl=0.893; NSW=0.874; rcor=869; rNcor=439; rlogoDP=154; rNsEucl=725; rNSW=899; rank_mean=617.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 55 2 94 0 0 1 1 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 50 1 94 0 100 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 38 37 0 6 0 99 0 99 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 6 7 4 0 0 1 99 0 0 0 0 0

BMY2_MA2375.1_JASPAR_shift11 (BMY2:MA2375.1:JASPAR) 0.729 0.573 7.445 0.892 0.871 887 452 92 746 926 620.600
; assembly_6 versus BMY2_MA2375.1_JASPAR (BMY2:MA2375.1:JASPAR); m=229/266; ncol2=11; w=0; offset=2; strand=D; shift=11; score= 620.6; -----------srCACGTGTGr- ; cor=0.729; Ncor=0.573; logoDP=7.445; NsEucl=0.892; NSW=0.871; rcor=887; rNcor=452; rlogoDP=92; rNsEucl=746; rNSW=926; rank_mean=620.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 45 525 3 983 0 0 0 1 11 66 591 0 c 0 0 0 0 0 0 0 0 0 0 0 413 20 975 0 1000 0 1 0 231 70 8 0 g 0 0 0 0 0 0 0 0 0 0 0 401 406 0 16 0 996 0 998 61 831 343 0 t 0 0 0 0 0 0 0 0 0 0 0 140 48 21 0 0 3 998 0 695 31 56 0

BAM8_MA2014.2_JASPAR_shift11 (BAM8:MA2014.2:JASPAR) 0.777 0.500 7.007 0.886 0.883 629 715 146 822 817 625.800
; assembly_6 versus BAM8_MA2014.2_JASPAR (BAM8:MA2014.2:JASPAR); m=230/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 625.8; -----------CACACGTGy--- ; cor=0.777; Ncor=0.500; logoDP=7.007; NsEucl=0.886; NSW=0.883; rcor=629; rNcor=715; rlogoDP=146; rNsEucl=822; rNSW=817; rank_mean=625.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 116 1383 6 1846 2 9 9 66 116 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 1278 101 1856 2 1862 1 31 1 1018 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 279 273 4 14 1 1863 5 1803 140 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 203 119 10 14 11 3 1831 6 602 0 0 0

AL8G13510.t2_BES1_1_AT5G45300_EEAD0597_EEADannot_shift11 (AL8G13510.t2_BES1_1_AT5G45300:EEAD0597:EEADannot) 0.730 0.573 7.184 0.892 0.871 882 449 129 753 931 628.800
; assembly_6 versus AL8G13510.t2_BES1_1_AT5G45300_EEAD0597_EEADannot (AL8G13510.t2_BES1_1_AT5G45300:EEAD0597:EEADannot); m=231/266; ncol2=8; w=0; offset=2; strand=D; shift=11; score= 628.8; -----------cACACGTG---- ; cor=0.730; Ncor=0.573; logoDP=7.184; NsEucl=0.892; NSW=0.871; rcor=882; rNcor=449; rlogoDP=129; rNsEucl=753; rNSW=931; rank_mean=628.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 81 0 97 1 0 1 4 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 66 1 100 0 99 0 1 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 21 16 0 3 0 100 0 96 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 98 0 0 0 0 0

BHLH99_ZmJAM2_Mo17_1_EEAD0237_EEADannot_shift4 (BHLH99_ZmJAM2_Mo17_1:EEAD0237:EEADannot) 0.768 0.404 5.238 0.904 0.908 678 1066 341 515 558 631.600
; assembly_6 versus BHLH99_ZmJAM2_Mo17_1_EEAD0237_EEADannot (BHLH99_ZmJAM2_Mo17_1:EEAD0237:EEADannot); m=232/266; ncol2=10; w=-5; offset=-5; strand=D; shift=4; score= 631.6; ----mayrwkwaAm--------- ; cor=0.768; Ncor=0.404; logoDP=5.238; NsEucl=0.904; NSW=0.908; rcor=678; rNcor=1066; rlogoDP=341; rNsEucl=515; rNSW=558; rank_mean=631.600; match_rank= a 0 0 0 0 30 64 9 52 29 14 33 65 69 35 0 0 0 0 0 0 0 0 0 c 0 0 0 0 54 8 44 2 5 3 4 5 12 65 0 0 0 0 0 0 0 0 0 g 0 0 0 0 3 9 7 38 1 31 9 6 8 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 13 19 40 8 65 52 54 24 11 0 0 0 0 0 0 0 0 0 0

BIM1_MA0964.3_JASPAR_shift12 (BIM1:MA0964.3:JASPAR) 0.802 0.458 7.286 0.880 0.885 495 856 111 894 803 631.800
; assembly_6 versus BIM1_MA0964.3_JASPAR (BIM1:MA0964.3:JASPAR); m=233/266; ncol2=8; w=0; offset=3; strand=D; shift=12; score= 631.8; ------------TCACGTGA--- ; cor=0.802; Ncor=0.458; logoDP=7.286; NsEucl=0.880; NSW=0.885; rcor=495; rNcor=856; rlogoDP=111; rNsEucl=894; rNSW=803; rank_mean=631.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 96 5 1380 1 11 7 3 1011 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 91 1377 1 1376 0 0 3 190 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 190 3 0 0 1376 1 1377 91 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 1011 3 7 11 1 1380 5 96 0 0 0

BIM1.ampDAP_M0165_AthalianaCistrome_rc_shift0 (BIM1.ampDAP:M0165:AthalianaCistrome_rc) 0.791 0.447 0.134 0.921 0.919 543 904 1079 208 430 632.800
; assembly_6 versus BIM1.ampDAP_M0165_AthalianaCistrome_rc (BIM1.ampDAP:M0165:AthalianaCistrome_rc); m=234/266; ncol2=8; w=-9; offset=-9; strand=R; shift=0; score= 632.8; rrcacrtr--------------- ; cor=0.791; Ncor=0.447; logoDP=0.134; NsEucl=0.921; NSW=0.919; rcor=543; rNcor=904; rlogoDP=1079; rNsEucl=208; rNSW=430; rank_mean=632.800; match_rank= a 179 155 139 279 93 149 108 150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 98 115 197 51 207 47 76 58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 158 162 119 120 134 267 124 278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 127 130 107 112 128 99 254 76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Zm00001d034298_MA1834.1_JASPAR_rc_shift11 (Zm00001d034298:MA1834.1:JASPAR_rc) 0.740 0.581 1.304 0.904 0.899 817 423 806 507 659 642.400
; assembly_6 versus Zm00001d034298_MA1834.1_JASPAR_rc (Zm00001d034298:MA1834.1:JASPAR_rc); m=235/266; ncol2=13; w=0; offset=2; strand=R; shift=11; score= 642.4; -----------ssCGCGTGGgs- ; cor=0.740; Ncor=0.581; logoDP=1.304; NsEucl=0.904; NSW=0.899; rcor=817; rNcor=423; rlogoDP=806; rNsEucl=507; rNSW=659; rank_mean=642.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 1276 1462 207 744 358 72 84 262 161 1494 1075 0 c 0 0 0 0 0 0 0 0 0 0 0 1777 1893 5681 401 5256 252 17 487 160 1597 2146 0 g 0 0 0 0 0 0 0 0 0 0 0 2323 1886 522 5039 489 6223 128 5812 6091 2040 2050 0 t 0 0 0 0 0 0 0 0 0 0 0 1226 1361 192 418 499 55 6373 41 190 1471 1331 0

BHLH17_B73_1_m1_EEAD0222_EEADannot_rc_shift12 (BHLH17_B73_1_m1:EEAD0222:EEADannot_rc) 0.791 0.452 6.591 0.883 0.890 541 884 188 862 761 647.200
; assembly_6 versus BHLH17_B73_1_m1_EEAD0222_EEADannot_rc (BHLH17_B73_1_m1:EEAD0222:EEADannot_rc); m=236/266; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 647.2; ------------sCATGTGc--- ; cor=0.791; Ncor=0.452; logoDP=6.591; NsEucl=0.883; NSW=0.890; rcor=541; rNcor=884; rlogoDP=188; rNsEucl=862; rNSW=761; rank_mean=647.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 20 0 100 0 0 0 0 24 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 50 100 0 24 0 0 0 61 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 100 0 98 11 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 76 0 100 2 4 0 0 0

BHLH149_MYC2A_B73_1_m1_EEAD0215_EEADannot_shift8 (BHLH149_MYC2A_B73_1_m1:EEAD0215:EEADannot) 0.738 0.492 5.513 0.896 0.893 824 744 293 664 722 649.400
; assembly_6 versus BHLH149_MYC2A_B73_1_m1_EEAD0215_EEADannot (BHLH149_MYC2A_B73_1_m1:EEAD0215:EEADannot); m=237/266; ncol2=8; w=-1; offset=-1; strand=D; shift=8; score= 649.4; --------wwwwaCAY------- ; cor=0.738; Ncor=0.492; logoDP=5.513; NsEucl=0.896; NSW=0.893; rcor=824; rNcor=744; rlogoDP=293; rNsEucl=664; rNSW=722; rank_mean=649.400; match_rank= a 0 0 0 0 0 0 0 0 34 32 46 59 59 14 100 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 2 3 6 10 15 86 0 30 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 13 4 4 18 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 64 52 44 27 8 0 0 70 0 0 0 0 0 0 0

BZIP99_Mo17_1_EEAD0318_EEADannot_shift10 (BZIP99_Mo17_1:EEAD0318:EEADannot) 0.723 0.568 4.452 0.898 0.886 917 471 457 633 791 653.800
; assembly_6 versus BZIP99_Mo17_1_EEAD0318_EEADannot (BZIP99_Mo17_1:EEAD0318:EEADannot); m=238/266; ncol2=15; w=0; offset=1; strand=D; shift=10; score= 653.8; ----------GmygACGTGGC-- ; cor=0.723; Ncor=0.568; logoDP=4.452; NsEucl=0.898; NSW=0.886; rcor=917; rNcor=471; rlogoDP=457; rNsEucl=633; rNSW=791; rank_mean=653.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 4 30 6 12 91 0 9 3 0 2 9 0 0 c 0 0 0 0 0 0 0 0 0 0 4 46 31 18 0 88 4 0 1 0 85 0 0 g 0 0 0 0 0 0 0 0 0 0 80 14 3 63 9 6 86 13 85 82 3 0 0 t 0 0 0 0 0 0 0 0 0 0 12 10 60 7 0 6 1 84 14 16 3 0 0

BZIP115_Mo17_1_EEAD0247_EEADannot_shift12 (BZIP115_Mo17_1:EEAD0247:EEADannot) 0.754 0.538 6.527 0.886 0.870 752 576 194 824 933 655.800
; assembly_6 versus BZIP115_Mo17_1_EEAD0247_EEADannot (BZIP115_Mo17_1:EEAD0247:EEADannot); m=239/266; ncol2=11; w=0; offset=3; strand=D; shift=12; score= 655.8; ------------TGACGTGGCA- ; cor=0.754; Ncor=0.538; logoDP=6.527; NsEucl=0.886; NSW=0.870; rcor=752; rNcor=576; rlogoDP=194; rNsEucl=824; rNSW=933; rank_mean=655.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 1 100 0 14 0 0 0 4 75 0 c 0 0 0 0 0 0 0 0 0 0 0 0 18 11 0 88 0 0 0 0 95 7 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 84 0 2 86 0 100 95 0 15 0 t 0 0 0 0 0 0 0 0 0 0 0 0 82 4 0 10 0 100 0 5 1 3 0

BZIP96_B73_1_m1_EEAD0315_EEADannot_shift10 (BZIP96_B73_1_m1:EEAD0315:EEADannot) 0.723 0.568 6.475 0.891 0.868 922 472 197 766 947 660.800
; assembly_6 versus BZIP96_B73_1_m1_EEAD0315_EEADannot (BZIP96_B73_1_m1:EEAD0315:EEADannot); m=240/266; ncol2=14; w=0; offset=1; strand=D; shift=10; score= 660.8; ----------GrTGACGTGGC-- ; cor=0.723; Ncor=0.568; logoDP=6.475; NsEucl=0.891; NSW=0.868; rcor=922; rNcor=472; rlogoDP=197; rNsEucl=766; rNSW=947; rank_mean=660.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 7 48 0 1 100 0 15 0 0 0 4 0 0 c 0 0 0 0 0 0 0 0 0 0 6 19 21 16 0 91 0 0 0 0 94 0 0 g 0 0 0 0 0 0 0 0 0 0 77 28 0 79 0 3 85 0 100 81 0 0 0 t 0 0 0 0 0 0 0 0 0 0 10 5 79 4 0 6 0 100 0 19 2 0 0

BEH3_MA1333.2_JASPAR_shift11 (BEH3:MA1333.2:JASPAR) 0.735 0.525 7.652 0.885 0.867 853 617 74 838 960 668.400
; assembly_6 versus BEH3_MA1333.2_JASPAR (BEH3:MA1333.2:JASPAR); m=241/266; ncol2=7; w=0; offset=2; strand=D; shift=11; score= 668.4; -----------yrCACGT----- ; cor=0.735; Ncor=0.525; logoDP=7.652; NsEucl=0.885; NSW=0.867; rcor=853; rNcor=617; rlogoDP=74; rNsEucl=838; rNSW=960; rank_mean=668.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 179 0 590 0 1 1 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 319 28 589 0 590 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 43 383 0 0 0 589 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 225 0 1 0 0 0 589 0 0 0 0 0

At4g18890.ampDAP_M0237_AthalianaCistrome_shift11 (At4g18890.ampDAP:M0237:AthalianaCistrome) 0.709 0.557 7.669 0.889 0.864 1033 513 73 794 980 678.600
; assembly_6 versus At4g18890.ampDAP_M0237_AthalianaCistrome (At4g18890.ampDAP:M0237:AthalianaCistrome); m=242/266; ncol2=8; w=0; offset=2; strand=D; shift=11; score= 678.6; -----------yRCACGTG---- ; cor=0.709; Ncor=0.557; logoDP=7.669; NsEucl=0.889; NSW=0.864; rcor=1033; rNcor=513; rlogoDP=73; rNsEucl=794; rNSW=980; rank_mean=678.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 83 0 304 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 156 1 303 0 304 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 26 220 0 0 0 304 0 304 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 116 0 1 0 0 0 304 0 0 0 0 0

LEC1-A_UN0423.1_JASPAR_rc_shift11 (LEC1-A:UN0423.1:JASPAR_rc) 0.727 0.519 5.994 0.890 0.879 899 644 230 777 852 680.400
; assembly_6 versus LEC1-A_UN0423.1_JASPAR_rc (LEC1-A:UN0423.1:JASPAR_rc); m=243/266; ncol2=11; w=0; offset=2; strand=R; shift=11; score= 680.4; -----------kmCACTTGth-- ; cor=0.727; Ncor=0.519; logoDP=5.994; NsEucl=0.890; NSW=0.879; rcor=899; rNcor=644; rlogoDP=230; rNsEucl=777; rNSW=852; rank_mean=680.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 1790 2983 0 7469 0 0 285 3 1189 2083 0 0 c 0 0 0 0 0 0 0 0 0 0 0 1436 2100 7613 0 7617 1 293 0 1564 2338 0 0 g 0 0 0 0 0 0 0 0 0 0 0 2225 1200 0 108 0 650 2 7614 1636 1271 0 0 t 0 0 0 0 0 0 0 0 0 0 0 2166 1334 4 40 0 6966 7037 0 3228 1925 0 0

BHLH17_Mo17_1_EEAD0223_EEADannot_shift12 (BHLH17_Mo17_1:EEAD0223:EEADannot) 0.780 0.446 6.709 0.879 0.882 616 907 180 904 831 687.600
; assembly_6 versus BHLH17_Mo17_1_EEAD0223_EEADannot (BHLH17_Mo17_1:EEAD0223:EEADannot); m=244/266; ncol2=10; w=0; offset=3; strand=D; shift=12; score= 687.6; ------------kCACATGs--- ; cor=0.780; Ncor=0.446; logoDP=6.709; NsEucl=0.879; NSW=0.882; rcor=616; rNcor=907; rlogoDP=180; rNsEucl=904; rNSW=831; rank_mean=687.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 3 0 100 0 76 0 0 3 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 5 100 0 100 0 0 0 25 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0 24 0 100 54 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 100 0 18 0 0 0

BZIP61_Mo17_1_EEAD0289_EEADannot_shift11 (BZIP61_Mo17_1:EEAD0289:EEADannot) 0.708 0.557 5.525 0.894 0.875 1038 515 290 714 889 689.200
; assembly_6 versus BZIP61_Mo17_1_EEAD0289_EEADannot (BZIP61_Mo17_1:EEAD0289:EEADannot); m=245/266; ncol2=11; w=0; offset=2; strand=D; shift=11; score= 689.2; -----------kcCACGTCryC- ; cor=0.708; Ncor=0.557; logoDP=5.525; NsEucl=0.894; NSW=0.875; rcor=1038; rNcor=515; rlogoDP=290; rNsEucl=714; rNSW=889; rank_mean=689.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 9 24 2 97 0 2 0 9 65 11 5 0 c 0 0 0 0 0 0 0 0 0 0 0 5 65 69 0 99 1 0 86 3 41 76 0 g 0 0 0 0 0 0 0 0 0 0 0 59 0 24 1 0 97 0 5 29 14 8 0 t 0 0 0 0 0 0 0 0 0 0 0 27 11 5 2 1 0 100 0 3 34 11 0

fgenesh1_pg.C_Chr_14.0001000151_M0253_1.02_CISBP_rc_shift11 (fgenesh1_pg.C_Chr_14.0001000151:M0253_1.02:CISBP_rc) 0.733 0.523 3.466 0.896 0.892 870 627 586 670 729 696.400
; assembly_6 versus fgenesh1_pg.C_Chr_14.0001000151_M0253_1.02_CISBP_rc (fgenesh1_pg.C_Chr_14.0001000151:M0253_1.02:CISBP_rc); m=246/266; ncol2=9; w=0; offset=2; strand=R; shift=11; score= 696.4; -----------gvCACryGy--- ; cor=0.733; Ncor=0.523; logoDP=3.466; NsEucl=0.896; NSW=0.892; rcor=870; rNcor=627; rlogoDP=586; rNsEucl=670; rNSW=729; rank_mean=696.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 24 36 4 88 1 34 10 8 10 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 18 27 95 1 92 1 57 4 56 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 40 30 0 9 4 64 6 77 8 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 18 7 1 2 3 1 27 11 26 0 0 0

XP_013613838.1_BES1_1_AT5G45300_EEAD0674_EEADannot_rc_shift13 (XP_013613838.1_BES1_1_AT5G45300:EEAD0674:EEADannot_rc) 0.811 0.463 3.622 0.882 0.888 448 842 568 875 775 701.600
; assembly_6 versus XP_013613838.1_BES1_1_AT5G45300_EEAD0674_EEADannot_rc (XP_013613838.1_BES1_1_AT5G45300:EEAD0674:EEADannot_rc); m=247/266; ncol2=9; w=0; offset=4; strand=R; shift=13; score= 701.6; -------------CACGTGTG-- ; cor=0.811; Ncor=0.463; logoDP=3.622; NsEucl=0.882; NSW=0.888; rcor=448; rNcor=842; rlogoDP=568; rNsEucl=875; rNSW=775; rank_mean=701.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 96 0 0 1 1 2 2 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 98 0 100 0 0 0 23 15 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 99 0 99 1 83 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 1 99 0 74 0 0 0

BZIP17_M0263_1.02_CISBP_rc_shift12 (BZIP17:M0263_1.02:CISBP_rc) 0.743 0.531 0.859 0.900 0.900 799 597 884 593 642 703.000
; assembly_6 versus BZIP17_M0263_1.02_CISBP_rc (BZIP17:M0263_1.02:CISBP_rc); m=248/266; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 703; ------------mcaCGTca--- ; cor=0.743; Ncor=0.531; logoDP=0.859; NsEucl=0.900; NSW=0.900; rcor=799; rNcor=597; rlogoDP=884; rNsEucl=593; rNSW=642; rank_mean=703.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 31 12 64 4 18 8 18 50 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 40 54 3 78 1 8 51 10 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 14 11 19 0 80 5 19 22 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 15 23 14 18 1 79 12 18 0 0 0

ABF3_M0267_1.02_CISBP_shift12 (ABF3:M0267_1.02:CISBP) 0.789 0.451 6.707 0.872 0.868 556 886 182 963 945 706.400
; assembly_6 versus ABF3_M0267_1.02_CISBP (ABF3:M0267_1.02:CISBP); m=249/266; ncol2=8; w=0; offset=3; strand=D; shift=12; score= 706.4; ------------ACACGTGT--- ; cor=0.789; Ncor=0.451; logoDP=6.707; NsEucl=0.872; NSW=0.868; rcor=556; rNcor=886; rlogoDP=182; rNsEucl=963; rNSW=945; rank_mean=706.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 97 1 97 1 1 1 1 1 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 1 97 1 97 1 1 1 1 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 97 1 97 1 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 97 1 97 0 0 0

ABF3_MA0930.1_JASPAR_shift12 (ABF3:MA0930.1:JASPAR) 0.789 0.451 6.708 0.872 0.868 556 886 181 964 946 706.600
; assembly_6 versus ABF3_MA0930.1_JASPAR (ABF3:MA0930.1:JASPAR); m=250/266; ncol2=8; w=0; offset=3; strand=D; shift=12; score= 706.6; ------------ACACGTGT--- ; cor=0.789; Ncor=0.451; logoDP=6.708; NsEucl=0.872; NSW=0.868; rcor=556; rNcor=886; rlogoDP=181; rNsEucl=964; rNSW=946; rank_mean=706.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 971 10 971 10 10 10 10 10 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 10 971 10 971 10 10 10 10 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 10 10 10 10 971 10 971 10 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 10 10 10 10 10 971 10 971 0 0 0

XP_013631386.1_BZIP_1_AT2G46270_EEAD0678_EEADannot_rc_shift9 (XP_013631386.1_BZIP_1_AT2G46270:EEAD0678:EEADannot_rc) 0.709 0.658 1.107 0.901 0.872 1035 174 836 577 918 708.000
; assembly_6 versus XP_013631386.1_BZIP_1_AT2G46270_EEAD0678_EEADannot_rc (XP_013631386.1_BZIP_1_AT2G46270:EEAD0678:EEADannot_rc); m=251/266; ncol2=; w=0; offset=0; strand=R; shift=9; score= 708; ----------------------- ; cor=0.709; Ncor=0.658; logoDP=1.107; NsEucl=0.901; NSW=0.872; rcor=1035; rNcor=174; rlogoDP=836; rNsEucl=577; rNSW=918; rank_mean=708.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

BZR1_EEAD0070_EEADannot_shift11 (BZR1:EEAD0070:EEADannot) 0.722 0.515 7.101 0.884 0.864 931 661 136 845 972 709.000
; assembly_6 versus BZR1_EEAD0070_EEADannot (BZR1:EEAD0070:EEADannot); m=252/266; ncol2=; w=0; offset=2; strand=D; shift=11; score= 709; ----------------------- ; cor=0.722; Ncor=0.515; logoDP=7.101; NsEucl=0.884; NSW=0.864; rcor=931; rNcor=661; rlogoDP=136; rNsEucl=845; rNSW=972; rank_mean=709.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

BZIP111_Mo17_1_EEAD0243_EEADannot_shift12 (BZIP111_Mo17_1:EEAD0243:EEADannot) 0.772 0.441 4.187 0.883 0.891 656 925 487 853 749 734.000
; assembly_6 versus BZIP111_Mo17_1_EEAD0243_EEADannot (BZIP111_Mo17_1:EEAD0243:EEADannot); m=253/266; ncol2=; w=0; offset=3; strand=D; shift=12; score= 734; ----------------------- ; cor=0.772; Ncor=0.441; logoDP=4.187; NsEucl=0.883; NSW=0.891; rcor=656; rNcor=925; rlogoDP=487; rNsEucl=853; rNSW=749; rank_mean=734.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

At1g78700.ampDAP_M0239_AthalianaCistrome_rc_shift7 (At1g78700.ampDAP:M0239:AthalianaCistrome_rc) 0.704 0.572 0.791 0.905 0.884 1066 454 890 482 812 740.800
; assembly_6 versus At1g78700.ampDAP_M0239_AthalianaCistrome_rc (At1g78700.ampDAP:M0239:AthalianaCistrome_rc); m=254/266; ncol2=; w=-2; offset=-2; strand=R; shift=7; score= 740.8; ----------------------- ; cor=0.704; Ncor=0.572; logoDP=0.791; NsEucl=0.905; NSW=0.884; rcor=1066; rNcor=454; rlogoDP=890; rNsEucl=482; rNSW=812; rank_mean=740.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

AT4G18890_MA1333.1_JASPAR_rc_shift10 (AT4G18890:MA1333.1:JASPAR_rc) 0.734 0.576 0.930 0.894 0.877 862 437 869 706 868 748.400
; assembly_6 versus AT4G18890_MA1333.1_JASPAR_rc (AT4G18890:MA1333.1:JASPAR_rc); m=255/266; ncol2=; w=0; offset=1; strand=R; shift=10; score= 748.4; ----------------------- ; cor=0.734; Ncor=0.576; logoDP=0.930; NsEucl=0.894; NSW=0.877; rcor=862; rNcor=437; rlogoDP=869; rNsEucl=706; rNSW=868; rank_mean=748.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

At4g21330_MA0580.1_JASPAR_shift6 (At4g21330:MA0580.1:JASPAR) 0.716 0.463 7.440 0.886 0.856 970 844 93 829 1020 751.200
; assembly_6 versus At4g21330_MA0580.1_JASPAR (At4g21330:MA0580.1:JASPAR); m=256/266; ncol2=; w=-3; offset=-3; strand=D; shift=6; score= 751.2; ----------------------- ; cor=0.716; Ncor=0.463; logoDP=7.440; NsEucl=0.886; NSW=0.856; rcor=970; rNcor=844; rlogoDP=93; rNsEucl=829; rNSW=1020; rank_mean=751.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Zm00001d034298_MA1834.2_JASPAR_rc_shift13 (Zm00001d034298:MA1834.2:JASPAR_rc) 0.814 0.407 1.295 0.881 0.901 425 1051 807 885 635 760.600
; assembly_6 versus Zm00001d034298_MA1834.2_JASPAR_rc (Zm00001d034298:MA1834.2:JASPAR_rc); m=257/266; ncol2=; w=0; offset=4; strand=R; shift=13; score= 760.6; ----------------------- ; cor=0.814; Ncor=0.407; logoDP=1.295; NsEucl=0.881; NSW=0.901; rcor=425; rNcor=1051; rlogoDP=807; rNsEucl=885; rNSW=635; rank_mean=760.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

MYC2_MYC2_Athamap_rc_shift14 (MYC2:MYC2:Athamap_rc) 0.838 0.479 0.260 0.881 0.886 313 787 1034 887 789 762.000
; assembly_6 versus MYC2_MYC2_Athamap_rc (MYC2:MYC2:Athamap_rc); m=258/266; ncol2=; w=0; offset=5; strand=R; shift=14; score= 762; ----------------------- ; cor=0.838; Ncor=0.479; logoDP=0.260; NsEucl=0.881; NSW=0.886; rcor=313; rNcor=787; rlogoDP=1034; rNsEucl=887; rNSW=789; rank_mean=762.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

BZIP12_BZIP12_Athamap_rc_shift10 (BZIP12:BZIP12:Athamap_rc) 0.751 0.590 0.820 0.889 0.864 770 389 888 790 974 762.200
; assembly_6 versus BZIP12_BZIP12_Athamap_rc (BZIP12:BZIP12:Athamap_rc); m=259/266; ncol2=; w=0; offset=1; strand=R; shift=10; score= 762.2; ----------------------- ; cor=0.751; Ncor=0.590; logoDP=0.820; NsEucl=0.889; NSW=0.864; rcor=770; rNcor=389; rlogoDP=888; rNsEucl=790; rNSW=974; rank_mean=762.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

OsbZIP42_MA2422.1_JASPAR_shift10 (OsbZIP42:MA2422.1:JASPAR) 0.711 0.508 5.278 0.883 0.864 1011 694 339 849 979 774.400
; assembly_6 versus OsbZIP42_MA2422.1_JASPAR (OsbZIP42:MA2422.1:JASPAR); m=260/266; ncol2=; w=0; offset=1; strand=D; shift=10; score= 774.4; ----------------------- ; cor=0.711; Ncor=0.508; logoDP=5.278; NsEucl=0.883; NSW=0.864; rcor=1011; rNcor=694; rlogoDP=339; rNsEucl=849; rNSW=979; rank_mean=774.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

bZIP3_1_EEAD0132_EEADannot_rc_shift11 (bZIP3_1:EEAD0132:EEADannot_rc) 0.716 0.562 0.985 0.889 0.866 972 499 860 781 965 815.400
; assembly_6 versus bZIP3_1_EEAD0132_EEADannot_rc (bZIP3_1:EEAD0132:EEADannot_rc); m=261/266; ncol2=; w=0; offset=2; strand=R; shift=11; score= 815.4; ----------------------- ; cor=0.716; Ncor=0.562; logoDP=0.985; NsEucl=0.889; NSW=0.866; rcor=972; rNcor=499; rlogoDP=860; rNsEucl=781; rNSW=965; rank_mean=815.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

bhlh112_M0229_1.02_CISBP_rc_shift12 (bhlh112:M0229_1.02:CISBP_rc) 0.738 0.475 3.486 0.877 0.864 827 806 583 913 981 822.000
; assembly_6 versus bhlh112_M0229_1.02_CISBP_rc (bhlh112:M0229_1.02:CISBP_rc); m=262/266; ncol2=; w=0; offset=3; strand=R; shift=12; score= 822; ----------------------- ; cor=0.738; Ncor=0.475; logoDP=3.486; NsEucl=0.877; NSW=0.864; rcor=827; rNcor=806; rlogoDP=583; rNsEucl=913; rNSW=981; rank_mean=822.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

BHLH112_MA0961.1_JASPAR_rc_shift12 (BHLH112:MA0961.1:JASPAR_rc) 0.738 0.474 3.484 0.877 0.863 831 811 584 916 984 825.200
; assembly_6 versus BHLH112_MA0961.1_JASPAR_rc (BHLH112:MA0961.1:JASPAR_rc); m=263/266; ncol2=; w=0; offset=3; strand=R; shift=12; score= 825.2; ----------------------- ; cor=0.738; Ncor=0.474; logoDP=3.484; NsEucl=0.877; NSW=0.863; rcor=831; rNcor=811; rlogoDP=584; rNsEucl=916; rNSW=984; rank_mean=825.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

AIB_MA0959.1_JASPAR_shift12 (AIB:MA0959.1:JASPAR) 0.732 0.418 5.963 0.862 0.848 874 1008 233 1020 1045 836.000
; assembly_6 versus AIB_MA0959.1_JASPAR (AIB:MA0959.1:JASPAR); m=264/266; ncol2=; w=0; offset=3; strand=D; shift=12; score= 836; ----------------------- ; cor=0.732; Ncor=0.418; logoDP=5.963; NsEucl=0.862; NSW=0.848; rcor=874; rNcor=1008; rlogoDP=233; rNsEucl=1020; rNSW=1045; rank_mean=836.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

AT5G48560_M0166_1.02_CISBP_shift12 (AT5G48560:M0166_1.02:CISBP) 0.721 0.412 6.506 0.853 0.828 937 1030 196 1051 1075 857.800
; assembly_6 versus AT5G48560_M0166_1.02_CISBP (AT5G48560:M0166_1.02:CISBP); m=265/266; ncol2=; w=0; offset=3; strand=D; shift=12; score= 857.8; ----------------------- ; cor=0.721; Ncor=0.412; logoDP=6.506; NsEucl=0.853; NSW=0.828; rcor=937; rNcor=1030; rlogoDP=196; rNsEucl=1051; rNSW=1075; rank_mean=857.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

BHLH78_MA0963.1_JASPAR_shift12 (BHLH78:MA0963.1:JASPAR) 0.721 0.412 6.507 0.853 0.828 937 1030 195 1052 1076 858.000
; assembly_6 versus BHLH78_MA0963.1_JASPAR (BHLH78:MA0963.1:JASPAR); m=266/266; ncol2=; w=0; offset=3; strand=D; shift=12; score= 858; ----------------------- ; cor=0.721; Ncor=0.412; logoDP=6.507; NsEucl=0.853; NSW=0.828; rcor=937; rNcor=1030; rlogoDP=195; rNsEucl=1052; rNSW=1076; rank_mean=858.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	match_rank	Aligned matrices
assembly_6_shift9 (assembly_6)													; assembly_6; m=0 (reference); ncol1=14; shift=9; ncol=23; ---------wwGCCACGTGGCww ; Alignment reference a 0 0 0 0 0 0 0 0 0 107 84 29 67 13 295 17 16 8 8 14 44 112 88 c 0 0 0 0 0 0 0 0 0 56 57 15 214 277 3 273 4 4 12 15 222 57 59 g 0 0 0 0 0 0 0 0 0 59 57 222 15 12 4 4 273 3 277 214 15 57 56 t 0 0 0 0 0 0 0 0 0 88 112 44 14 8 8 16 17 295 13 67 29 84 107
HY5_MA0551.1_JASPAR_shift8 (HY5:MA0551.1:JASPAR)	0.966	0.846	7.575	0.966	0.984	31	9	80	16	29	33.000	1	; assembly_6 versus HY5_MA0551.1_JASPAR (HY5:MA0551.1:JASPAR); m=1/266; ncol2=16; w=-1; offset=-1; strand=D; shift=8; score= 33; --------wwtGmCACGTGkCaw ; cor=0.966; Ncor=0.846; logoDP=7.575; NsEucl=0.966; NSW=0.984; rcor=31; rNcor=9; rlogoDP=80; rNsEucl=16; rNSW=29; rank_mean=33.000; match_rank=1 a 0 0 0 0 0 0 0 0 103 108 52 9 150 0 310 3 1 0 2 4 24 183 94 c 0 0 0 0 0 0 0 0 60 56 55 8 165 317 1 311 5 9 1 1 279 30 62 g 0 0 0 0 0 0 0 0 68 62 30 279 1 1 9 5 311 1 317 165 8 55 56 t 0 0 0 0 0 0 0 0 89 94 183 24 4 2 0 1 3 310 0 150 9 52 108
HY5_MA0551.2_JASPAR_shift10 (HY5:MA0551.2:JASPAR)	0.966	0.828	7.574	0.961	0.981	32	15	81	22	30	36.000	2	; assembly_6 versus HY5_MA0551.2_JASPAR (HY5:MA0551.2:JASPAR); m=2/266; ncol2=12; w=0; offset=1; strand=D; shift=10; score= 36; ----------tGmCACGTGkCa- ; cor=0.966; Ncor=0.828; logoDP=7.574; NsEucl=0.961; NSW=0.981; rcor=32; rNcor=15; rlogoDP=81; rNsEucl=22; rNSW=30; rank_mean=36.000; match_rank=2 a 0 0 0 0 0 0 0 0 0 0 52 9 150 0 310 3 1 0 2 4 24 183 0 c 0 0 0 0 0 0 0 0 0 0 55 8 165 317 1 311 5 9 1 1 279 30 0 g 0 0 0 0 0 0 0 0 0 0 30 279 1 1 9 5 311 1 317 165 8 55 0 t 0 0 0 0 0 0 0 0 0 0 183 24 4 2 0 1 3 310 0 150 9 52 0
DPBF3_MA1338.2_JASPAR_shift7 (DPBF3:MA1338.2:JASPAR)	0.950	0.782	7.319	0.962	0.980	40	26	109	20	31	45.200	4	; assembly_6 versus DPBF3_MA1338.2_JASPAR (DPBF3:MA1338.2:JASPAR); m=3/266; ncol2=17; w=-2; offset=-2; strand=D; shift=7; score= 45.2; -------wwwtGmCACGTGkCmw ; cor=0.950; Ncor=0.782; logoDP=7.319; NsEucl=0.962; NSW=0.980; rcor=40; rNcor=26; rlogoDP=109; rNsEucl=20; rNSW=31; rank_mean=45.200; match_rank=4 a 0 0 0 0 0 0 0 836 819 709 317 74 811 6 2419 1 9 7 97 307 335 901 775 c 0 0 0 0 0 0 0 341 393 512 355 30 1580 2407 1 2409 26 9 269 17 1703 790 462 g 0 0 0 0 0 0 0 460 480 414 262 2110 17 5 5 14 2388 1 2041 671 156 299 390 t 0 0 0 0 0 0 0 792 737 794 1495 215 21 11 4 5 6 2412 22 1434 235 439 802
BPE_MA1359.2_JASPAR_rc_shift9 (BPE:MA1359.2:JASPAR_rc)	0.934	0.934	7.280	0.961	0.978	59	1	113	23	35	46.200	5	; assembly_6 versus BPE_MA1359.2_JASPAR_rc (BPE:MA1359.2:JASPAR_rc); m=4/266; ncol2=14; w=0; offset=0; strand=R; shift=9; score= 46.2; ---------rtgcCACGTGgcwy ; cor=0.934; Ncor=0.934; logoDP=7.280; NsEucl=0.961; NSW=0.978; rcor=59; rNcor=1; rlogoDP=113; rNsEucl=23; rNSW=35; rank_mean=46.200; match_rank=5 a 0 0 0 0 0 0 0 0 0 108 98 90 77 1 396 0 8 0 0 71 72 142 94 c 0 0 0 0 0 0 0 0 0 85 81 72 162 393 0 387 0 0 2 87 162 74 110 g 0 0 0 0 0 0 0 0 0 108 75 161 85 2 0 0 388 0 393 162 72 79 83 t 0 0 0 0 0 0 0 0 0 95 142 73 72 0 0 9 0 396 1 76 90 101 109
PIF3_PIF3_2__Athamap_shift8 (PIF3:PIF3:2)(Athamap)	0.895	0.737	8.352	0.944	0.956	124	55	34	56	103	74.400	10	; assembly_6 versus PIF3_PIF3_2__Athamap (PIF3:PIF3:2)(Athamap); m=7/266; ncol2=10; w=-1; offset=-1; strand=D; shift=8; score= 74.4; --------rdrvCCACGT----- ; cor=0.895; Ncor=0.737; logoDP=8.352; NsEucl=0.944; NSW=0.956; rcor=124; rNcor=55; rlogoDP=34; rNsEucl=56; rNSW=103; rank_mean=74.400; match_rank=10 a 0 0 0 0 0 0 0 0 15 9 10 8 1 0 32 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 2 4 2 11 26 32 0 32 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 9 10 13 13 5 0 0 0 32 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 6 9 7 0 0 0 0 0 0 32 0 0 0 0 0
bZIP3_2_EEAD0133_EEADannot_shift11 (bZIP3_2:EEAD0133:EEADannot)	0.918	0.721	7.362	0.940	0.961	82	69	105	75	83	82.800	11	; assembly_6 versus bZIP3_2_EEAD0133_EEADannot (bZIP3_2:EEAD0133:EEADannot); m=8/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 82.8; -----------kmCACGTGkC-- ; cor=0.918; Ncor=0.721; logoDP=7.362; NsEucl=0.940; NSW=0.961; rcor=82; rNcor=69; rlogoDP=105; rNsEucl=75; rNSW=83; rank_mean=82.800; match_rank=11 a 0 0 0 0 0 0 0 0 0 0 0 28 117 2 214 1 4 0 0 0 13 0 0 c 0 0 0 0 0 0 0 0 0 0 0 5 92 196 0 211 0 0 0 0 179 0 0 g 0 0 0 0 0 0 0 0 0 0 0 63 7 0 2 0 207 0 216 104 6 0 0 t 0 0 0 0 0 0 0 0 0 0 0 120 0 18 0 4 5 216 0 112 18 0 0
PIF3_PIF3_ArabidopsisPBM_shift11 (PIF3:PIF3:ArabidopsisPBM)	0.936	0.668	7.864	0.940	0.964	55	153	56	81	79	84.800	12	; assembly_6 versus PIF3_PIF3_ArabidopsisPBM (PIF3:PIF3:ArabidopsisPBM); m=9/266; ncol2=14; w=0; offset=2; strand=D; shift=11; score= 84.8; -----------sCCACGTGGs-- ; cor=0.936; Ncor=0.668; logoDP=7.864; NsEucl=0.940; NSW=0.964; rcor=55; rNcor=153; rlogoDP=56; rNsEucl=81; rNSW=79; rank_mean=84.800; match_rank=12 a 0 0 0 0 0 0 0 0 0 0 0 18 0 1 99 0 3 0 0 1 9 0 0 c 0 0 0 0 0 0 0 0 0 0 0 37 96 99 1 97 0 0 0 3 40 0 0 g 0 0 0 0 0 0 0 0 0 0 0 37 3 0 0 0 97 1 99 96 35 0 0 t 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 3 0 99 1 0 16 0 0
1500010105_M0364_1.02_CISBP_shift9 (1500010105:M0364_1.02:CISBP)	0.976	0.697	5.691	0.968	0.990	27	110	268	12	15	86.400	13	; assembly_6 versus 1500010105_M0364_1.02_CISBP (1500010105:M0364_1.02:CISBP); m=10/266; ncol2=16; w=0; offset=0; strand=D; shift=9; score= 86.4; ---------wyGCCACGTG---- ; cor=0.976; Ncor=0.697; logoDP=5.691; NsEucl=0.968; NSW=0.990; rcor=27; rNcor=110; rlogoDP=268; rNsEucl=12; rNSW=15; rank_mean=86.400; match_rank=13 a 0 0 0 0 0 0 0 0 0 25 8 12 21 6 100 3 4 0 6 0 0 0 0 c 0 0 0 0 0 0 0 0 0 22 46 2 79 92 0 91 10 6 9 0 0 0 0 g 0 0 0 0 0 0 0 0 0 24 6 78 0 0 0 6 84 0 79 0 0 0 0 t 0 0 0 0 0 0 0 0 0 29 40 8 0 2 0 0 2 94 6 0 0 0 0
BHLH74_MA1360.2_JASPAR_rc_shift9 (BHLH74:MA1360.2:JASPAR_rc)	0.865	0.865	7.450	0.943	0.955	208	6	91	59	106	94.000	14	; assembly_6 versus BHLH74_MA1360.2_JASPAR_rc (BHLH74:MA1360.2:JASPAR_rc); m=11/266; ncol2=14; w=0; offset=0; strand=R; shift=9; score= 94; ---------dwrbCACGTGvbwm ; cor=0.865; Ncor=0.865; logoDP=7.450; NsEucl=0.943; NSW=0.955; rcor=208; rNcor=6; rlogoDP=91; rNsEucl=59; rNSW=106; rank_mean=94.000; match_rank=14 a 0 0 0 0 0 0 0 0 0 110 115 127 49 1 439 0 3 0 1 117 92 138 122 c 0 0 0 0 0 0 0 0 0 94 92 92 148 438 0 436 0 0 0 159 110 97 121 g 0 0 0 0 0 0 0 0 0 110 102 131 114 0 0 0 436 0 438 111 118 79 96 t 0 0 0 0 0 0 0 0 0 125 130 89 128 0 0 3 0 439 0 52 119 125 100
BIM2_MA0965.2_JASPAR_shift8 (BIM2:MA0965.2:JASPAR)	0.877	0.768	6.843	0.946	0.960	161	33	165	46	89	98.800	15	; assembly_6 versus BIM2_MA0965.2_JASPAR (BIM2:MA0965.2:JASPAR); m=12/266; ncol2=18; w=-1; offset=-1; strand=D; shift=8; score= 98.8; --------wwwgkCACGTGmcww ; cor=0.877; Ncor=0.768; logoDP=6.843; NsEucl=0.946; NSW=0.960; rcor=161; rNcor=33; rlogoDP=165; rNsEucl=46; rNSW=89; rank_mean=98.800; match_rank=15 a 0 0 0 0 0 0 0 0 3104 3238 3383 2362 2197 28 10091 16 162 84 36 3003 1996 3238 2808 c 0 0 0 0 0 0 0 0 2178 2012 1958 1874 1902 10294 36 10174 23 165 20 3275 4150 1796 2323 g 0 0 0 0 0 0 0 0 2211 2323 1799 4148 3272 20 166 23 10179 36 10294 1899 1874 1964 2010 t 0 0 0 0 0 0 0 0 2885 2805 3238 1994 3007 36 85 165 14 10093 28 2201 2358 3380 3237
BZR1_MA0550.1_JASPAR_shift9 (BZR1:MA0550.1:JASPAR)	0.871	0.871	6.906	0.944	0.956	187	2	158	53	101	100.200	16	; assembly_6 versus BZR1_MA0550.1_JASPAR (BZR1:MA0550.1:JASPAR); m=13/266; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 100.2; ---------mmkmCACGTGdvmm ; cor=0.871; Ncor=0.871; logoDP=6.906; NsEucl=0.944; NSW=0.956; rcor=187; rNcor=2; rlogoDP=158; rNsEucl=53; rNSW=101; rank_mean=100.200; match_rank=16 a 0 0 0 0 0 0 0 0 0 63 55 30 49 0 147 6 0 0 6 42 41 42 81 c 0 0 0 0 0 0 0 0 0 60 47 20 66 153 2 147 0 0 5 0 53 61 39 g 0 0 0 0 0 0 0 0 0 30 27 52 26 0 0 0 153 0 142 39 43 22 0 t 0 0 0 0 0 0 0 0 0 0 24 51 12 0 4 0 0 153 0 72 16 28 33
PIF3_PIF3_1__Athamap_rc_shift7 (PIF3:PIF3:1)(Athamap_rc)	0.881	0.686	7.830	0.943	0.955	150	121	57	63	111	100.400	17	; assembly_6 versus PIF3_PIF3_1__Athamap_rc (PIF3:PIF3:1)(Athamap_rc); m=14/266; ncol2=11; w=-2; offset=-2; strand=R; shift=7; score= 100.4; -------mGwskyCACGT----- ; cor=0.881; Ncor=0.686; logoDP=7.830; NsEucl=0.943; NSW=0.955; rcor=150; rNcor=121; rlogoDP=57; rNsEucl=63; rNSW=111; rank_mean=100.400; match_rank=17 a 0 0 0 0 0 0 0 12 0 10 2 0 1 0 27 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 9 4 0 13 6 13 27 0 27 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 2 19 6 9 12 2 0 0 0 27 0 0 0 0 0 0 t 0 0 0 0 0 0 0 4 4 11 3 9 11 0 0 0 0 27 0 0 0 0 0
PIF7_MA1364.1_JASPAR_shift5 (PIF7:MA1364.1:JASPAR)	0.976	0.596	7.565	0.967	0.988	28	364	82	15	21	102.000	18	; assembly_6 versus PIF7_MA1364.1_JASPAR (PIF7:MA1364.1:JASPAR); m=15/266; ncol2=10; w=-4; offset=-4; strand=D; shift=5; score= 102; -----swkrrwsCCA-------- ; cor=0.976; Ncor=0.596; logoDP=7.565; NsEucl=0.967; NSW=0.988; rcor=28; rNcor=364; rlogoDP=82; rNsEucl=15; rNSW=21; rank_mean=102.000; match_rank=18 a 0 0 0 0 0 11 28 19 46 42 28 4 4 0 112 0 0 0 0 0 0 0 0 c 0 0 0 0 0 33 20 9 8 14 8 29 85 112 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 54 22 51 39 32 22 66 4 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 14 42 33 19 24 54 13 19 0 0 0 0 0 0 0 0 0 0
bZIP53_1_EEAD0100_EEADannot_shift11 (bZIP53_1:EEAD0100:EEADannot)	0.904	0.710	7.389	0.935	0.954	106	90	101	100	116	102.600	19	; assembly_6 versus bZIP53_1_EEAD0100_EEADannot (bZIP53_1:EEAD0100:EEADannot); m=16/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 102.6; -----------gwsACGTGGC-- ; cor=0.904; Ncor=0.710; logoDP=7.389; NsEucl=0.935; NSW=0.954; rcor=106; rNcor=90; rlogoDP=101; rNsEucl=100; rNSW=116; rank_mean=102.600; match_rank=19 a 0 0 0 0 0 0 0 0 0 0 0 212 405 0 1000 0 0 0 0 0 25 0 0 c 0 0 0 0 0 0 0 0 0 0 0 189 239 595 0 1000 7 0 0 0 975 0 0 g 0 0 0 0 0 0 0 0 0 0 0 465 0 344 0 0 993 0 1000 763 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 134 356 61 0 0 0 1000 0 237 0 0 0
ABI5_MA0931.1_JASPAR_shift10 (ABI5:MA0931.1:JASPAR)	0.932	0.666	6.580	0.945	0.970	61	164	189	48	57	103.800	20	; assembly_6 versus ABI5_MA0931.1_JASPAR (ABI5:MA0931.1:JASPAR); m=17/266; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 103.8; ----------bgmCACGTGk--- ; cor=0.932; Ncor=0.666; logoDP=6.580; NsEucl=0.945; NSW=0.970; rcor=61; rNcor=164; rlogoDP=189; rNsEucl=48; rNSW=57; rank_mean=103.800; match_rank=20 a 0 0 0 0 0 0 0 0 0 0 181 87 608 0 999 0 0 0 152 164 0 0 0 c 0 0 0 0 0 0 0 0 0 0 257 87 314 922 0 999 0 0 70 164 0 0 0 g 0 0 0 0 0 0 0 0 0 0 257 660 0 78 0 0 999 0 709 337 0 0 0 t 0 0 0 0 0 0 0 0 0 0 306 167 78 0 0 0 0 999 70 336 0 0 0
PIF3_MA0560.1_JASPAR_shift10 (PIF3:MA0560.1:JASPAR)	0.921	0.658	7.196	0.940	0.964	79	176	125	80	78	107.600	24	; assembly_6 versus PIF3_MA0560.1_JASPAR (PIF3:MA0560.1:JASPAR); m=18/266; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 107.6; ----------dgCCACGTGr--- ; cor=0.921; Ncor=0.658; logoDP=7.196; NsEucl=0.940; NSW=0.964; rcor=79; rNcor=176; rlogoDP=125; rNsEucl=80; rNSW=78; rank_mean=107.600; match_rank=24 a 0 0 0 0 0 0 0 0 0 0 210 58 19 0 527 0 0 0 0 259 0 0 0 c 0 0 0 0 0 0 0 0 0 0 26 131 399 527 0 409 0 0 0 33 0 0 0 g 0 0 0 0 0 0 0 0 0 0 148 222 94 0 0 0 527 0 527 137 0 0 0 t 0 0 0 0 0 0 0 0 0 0 143 116 15 0 0 118 0 527 0 98 0 0 0
bZIP11_1_EEAD0094_EEADannot_shift10 (bZIP11_1:EEAD0094:EEADannot)	0.915	0.654	7.104	0.937	0.960	84	183	135	90	88	116.000	27	; assembly_6 versus bZIP11_1_EEAD0094_EEADannot (bZIP11_1:EEAD0094:EEADannot); m=20/266; ncol2=8; w=0; offset=1; strand=D; shift=10; score= 116; ----------tGmCACGT----- ; cor=0.915; Ncor=0.654; logoDP=7.104; NsEucl=0.937; NSW=0.960; rcor=84; rNcor=183; rlogoDP=135; rNsEucl=90; rNSW=88; rank_mean=116.000; match_rank=27 a 0 0 0 0 0 0 0 0 0 0 104 0 328 0 1000 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 207 0 672 1000 0 1000 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 142 795 0 0 0 0 1000 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 547 205 0 0 0 0 0 1000 0 0 0 0 0
ABF1_MA0570.3_JASPAR_shift12 (ABF1:MA0570.3:JASPAR)	0.927	0.662	6.454	0.940	0.964	66	168	199	76	76	117.000	29	; assembly_6 versus ABF1_MA0570.3_JASPAR (ABF1:MA0570.3:JASPAR); m=22/266; ncol2=18; w=0; offset=3; strand=D; shift=12; score= 117; ------------aCACGTGkCA- ; cor=0.927; Ncor=0.662; logoDP=6.454; NsEucl=0.940; NSW=0.964; rcor=66; rNcor=168; rlogoDP=199; rNsEucl=76; rNSW=76; rank_mean=117.000; match_rank=29 a 0 0 0 0 0 0 0 0 0 0 0 0 593 83 1123 10 16 4 9 39 81 909 0 c 0 0 0 0 0 0 0 0 0 0 0 0 284 793 4 1099 9 8 3 11 999 36 0 g 0 0 0 0 0 0 0 0 0 0 0 0 60 124 11 15 1107 1 1123 707 28 117 0 t 0 0 0 0 0 0 0 0 0 0 0 0 204 141 3 17 9 1128 6 384 33 79 0
AREB3_MA1338.1_JASPAR_shift7 (AREB3:MA1338.1:JASPAR)	0.875	0.711	7.500	0.936	0.946	170	88	87	99	142	117.200	30	; assembly_6 versus AREB3_MA1338.1_JASPAR (AREB3:MA1338.1:JASPAR); m=23/266; ncol2=11; w=-2; offset=-2; strand=D; shift=7; score= 117.2; -------wwwggwsACGT----- ; cor=0.875; Ncor=0.711; logoDP=7.500; NsEucl=0.936; NSW=0.946; rcor=170; rNcor=88; rlogoDP=87; rNsEucl=99; rNSW=142; rank_mean=117.200; match_rank=30 a 0 0 0 0 0 0 0 246 225 200 77 142 259 1 598 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 43 52 40 35 74 93 349 0 598 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 149 142 98 351 358 0 236 0 0 598 0 0 0 0 0 0 t 0 0 0 0 0 0 0 160 179 260 135 24 246 12 0 0 0 598 0 0 0 0 0
TZP1_EEAD0061_EEADannot_shift11 (TZP1:EEAD0061:EEADannot)	0.990	0.566	7.167	0.969	0.992	11	478	131	10	12	128.400	32	; assembly_6 versus TZP1_EEAD0061_EEADannot (TZP1:EEAD0061:EEADannot); m=25/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 128.4; -----------GmCACGTG---- ; cor=0.990; Ncor=0.566; logoDP=7.167; NsEucl=0.969; NSW=0.992; rcor=11; rNcor=478; rlogoDP=131; rNsEucl=10; rNSW=12; rank_mean=128.400; match_rank=32 a 0 0 0 0 0 0 0 0 0 0 0 4 34 0 99 0 0 0 5 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 3 56 100 0 100 0 1 11 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 83 2 0 1 0 100 0 84 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 99 0 0 0 0 0
BHLH125_ZmSPT1_B73_1_m1_EEAD0211_EEADannot_shift11 (BHLH125_ZmSPT1_B73_1_m1:EEAD0211:EEADannot)	0.879	0.690	7.556	0.928	0.943	158	117	83	137	169	132.800	34	; assembly_6 versus BHLH125_ZmSPT1_B73_1_m1_EEAD0211_EEADannot (BHLH125_ZmSPT1_B73_1_m1:EEAD0211:EEADannot); m=27/266; ncol2=13; w=0; offset=2; strand=D; shift=11; score= 132.8; -----------gcCACGTGGGc- ; cor=0.879; Ncor=0.690; logoDP=7.556; NsEucl=0.928; NSW=0.943; rcor=158; rNcor=117; rlogoDP=83; rNsEucl=137; rNSW=169; rank_mean=132.800; match_rank=34 a 0 0 0 0 0 0 0 0 0 0 0 15 17 0 99 1 1 0 0 0 10 12 0 c 0 0 0 0 0 0 0 0 0 0 0 15 47 100 0 94 0 0 0 11 12 60 0 g 0 0 0 0 0 0 0 0 0 0 0 59 22 0 1 0 99 0 100 86 69 11 0 t 0 0 0 0 0 0 0 0 0 0 0 11 14 0 0 5 0 100 0 3 9 17 0
ABF2.DAP_M0217_AthalianaCistrome_shift5 (ABF2.DAP:M0217:AthalianaCistrome)	0.861	0.670	7.368	0.938	0.946	220	150	104	87	145	141.200	36	; assembly_6 versus ABF2.DAP_M0217_AthalianaCistrome (ABF2.DAP:M0217:AthalianaCistrome); m=29/266; ncol2=8; w=-4; offset=-4; strand=D; shift=5; score= 141.2; -----dawwwTGM---------- ; cor=0.861; Ncor=0.670; logoDP=7.368; NsEucl=0.938; NSW=0.946; rcor=220; rNcor=150; rlogoDP=104; rNsEucl=87; rNSW=145; rank_mean=141.200; match_rank=36 a 0 0 0 0 0 207 278 265 237 184 25 1 174 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 79 80 43 85 138 84 0 421 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 157 96 78 80 110 54 567 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 152 141 209 193 163 432 27 0 0 0 0 0 0 0 0 0 0 0
BHLH125_ZmSPT1_Mo17_1_EEAD0212_EEADannot_shift11 (BHLH125_ZmSPT1_Mo17_1:EEAD0212:EEADannot)	0.872	0.685	7.681	0.926	0.940	179	122	72	149	187	141.800	37	; assembly_6 versus BHLH125_ZmSPT1_Mo17_1_EEAD0212_EEADannot (BHLH125_ZmSPT1_Mo17_1:EEAD0212:EEADannot); m=30/266; ncol2=8; w=0; offset=2; strand=D; shift=11; score= 141.8; -----------gsCACGTG---- ; cor=0.872; Ncor=0.685; logoDP=7.681; NsEucl=0.926; NSW=0.940; rcor=179; rNcor=122; rlogoDP=72; rNsEucl=149; rNSW=187; rank_mean=141.800; match_rank=37 a 0 0 0 0 0 0 0 0 0 0 0 19 12 0 100 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 10 44 100 0 96 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 58 29 0 0 0 100 0 100 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 13 15 0 0 4 0 100 0 0 0 0 0
ABF1_MA0570.1_JASPAR_shift10 (ABF1:MA0570.1:JASPAR)	0.907	0.590	7.755	0.943	0.958	101	390	64	64	96	143.000	38	; assembly_6 versus ABF1_MA0570.1_JASPAR (ABF1:MA0570.1:JASPAR); m=31/266; ncol2=12; w=0; offset=1; strand=D; shift=10; score= 143; ----------GgmCACGTGGCm- ; cor=0.907; Ncor=0.590; logoDP=7.755; NsEucl=0.943; NSW=0.958; rcor=101; rNcor=390; rlogoDP=64; rNsEucl=64; rNSW=96; rank_mean=143.000; match_rank=38 a 0 0 0 0 0 0 0 0 0 0 0 8 19 0 43 0 0 0 0 0 0 17 0 c 0 0 0 0 0 0 0 0 0 0 4 2 16 35 0 44 0 0 0 0 44 14 0 g 0 0 0 0 0 0 0 0 0 0 32 28 0 8 1 0 44 0 44 38 0 9 0 t 0 0 0 0 0 0 0 0 0 0 8 6 9 1 0 0 0 44 0 6 0 4 0
BZIP16_MA1349.2_JASPAR_shift12 (BZIP16:MA1349.2:JASPAR)	0.896	0.640	7.284	0.926	0.945	121	213	112	159	153	151.600	40	; assembly_6 versus BZIP16_MA1349.2_JASPAR (BZIP16:MA1349.2:JASPAR); m=33/266; ncol2=11; w=0; offset=3; strand=D; shift=12; score= 151.6; ------------ysACGTGGCA- ; cor=0.896; Ncor=0.640; logoDP=7.284; NsEucl=0.926; NSW=0.945; rcor=121; rNcor=213; rlogoDP=112; rNsEucl=159; rNSW=153; rank_mean=151.600; match_rank=40 a 0 0 0 0 0 0 0 0 0 0 0 0 145 0 594 0 0 0 0 0 33 464 0 c 0 0 0 0 0 0 0 0 0 0 0 0 170 302 0 586 7 0 0 0 561 22 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 265 0 7 587 0 594 529 0 94 0 t 0 0 0 0 0 0 0 0 0 0 0 0 279 27 0 1 0 594 0 65 0 14 0
bHLH31_MA1359.1_JASPAR_shift6 (bHLH31:MA1359.1:JASPAR)	0.888	0.592	7.158	0.949	0.963	137	380	132	41	81	154.200	41	; assembly_6 versus bHLH31_MA1359.1_JASPAR (bHLH31:MA1359.1:JASPAR); m=34/266; ncol2=10; w=-3; offset=-3; strand=D; shift=6; score= 154.2; ------swkgwgrCAC------- ; cor=0.888; Ncor=0.592; logoDP=7.158; NsEucl=0.949; NSW=0.963; rcor=137; rNcor=380; rlogoDP=132; rNsEucl=41; rNSW=81; rank_mean=154.200; match_rank=41 a 0 0 0 0 0 0 138 263 97 136 164 126 153 0 595 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 179 44 122 100 116 131 142 595 0 581 0 0 0 0 0 0 0 g 0 0 0 0 0 0 215 54 204 230 83 231 194 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 63 234 172 129 232 107 106 0 0 14 0 0 0 0 0 0 0
GBF2_MA1672.1_JASPAR_shift11 (GBF2:MA1672.1:JASPAR)	0.872	0.697	5.134	0.937	0.952	180	109	358	92	122	172.200	44	; assembly_6 versus GBF2_MA1672.1_JASPAR (GBF2:MA1672.1:JASPAR); m=35/266; ncol2=15; w=0; offset=2; strand=D; shift=11; score= 172.2; -----------rhsACGTGGCAw ; cor=0.872; Ncor=0.697; logoDP=5.134; NsEucl=0.937; NSW=0.952; rcor=180; rNcor=109; rlogoDP=358; rNsEucl=92; rNSW=122; rank_mean=172.200; match_rank=44 a 0 0 0 0 0 0 0 0 0 0 0 2246 2324 560 7479 223 319 227 174 333 1027 5558 2457 c 0 0 0 0 0 0 0 0 0 0 0 1574 2084 2988 101 7122 107 127 83 153 6254 596 1420 g 0 0 0 0 0 0 0 0 0 0 0 2262 679 3420 145 221 7275 77 7553 6028 282 891 1653 t 0 0 0 0 0 0 0 0 0 0 0 1840 2835 954 197 356 221 7491 112 1408 359 877 2392
OJ1058_MA1033.1_JASPAR_rc_shift12 (OJ1058:MA1033.1:JASPAR_rc)	0.947	0.541	7.427	0.937	0.968	43	565	96	93	64	172.200	45	; assembly_6 versus OJ1058_MA1033.1_JASPAR_rc (OJ1058:MA1033.1:JASPAR_rc); m=36/266; ncol2=12; w=0; offset=3; strand=R; shift=12; score= 172.2; ------------mCACGTGk--- ; cor=0.947; Ncor=0.541; logoDP=7.427; NsEucl=0.937; NSW=0.968; rcor=43; rNcor=565; rlogoDP=96; rNsEucl=93; rNSW=64; rank_mean=172.200; match_rank=45 a 0 0 0 0 0 0 0 0 0 0 0 0 495 3 990 3 3 3 3 3 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 495 990 3 990 3 3 3 3 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 5 3 3 3 990 3 990 332 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 5 3 3 3 3 990 3 661 0 0 0
Os05g0437700_MA2401.1_JASPAR_shift12 (Os05g0437700:MA2401.1:JASPAR)	0.947	0.541	7.394	0.937	0.968	44	566	100	91	62	172.600	46	; assembly_6 versus Os05g0437700_MA2401.1_JASPAR (Os05g0437700:MA2401.1:JASPAR); m=37/266; ncol2=12; w=0; offset=3; strand=D; shift=12; score= 172.6; ------------mCACGTGk--- ; cor=0.947; Ncor=0.541; logoDP=7.394; NsEucl=0.937; NSW=0.968; rcor=44; rNcor=566; rlogoDP=100; rNsEucl=91; rNSW=62; rank_mean=172.600; match_rank=46 a 0 0 0 0 0 0 0 0 0 0 0 0 495 3.29 990 3.29 3.29 3.29 3.29 3.29 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 495 990 3.29 990 3.29 3.29 3.29 3.29 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 4.90 3.29 3.29 3.29 990 3.29 990 332 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 4.90 3.29 3.29 3.29 3.29 990 3.29 661 0 0 0
LOC_Os05g36160_M0329_1.02_CISBP_shift12 (LOC_Os05g36160:M0329_1.02:CISBP)	0.946	0.541	7.470	0.936	0.967	45	568	88	97	66	172.800	47	; assembly_6 versus LOC_Os05g36160_M0329_1.02_CISBP (LOC_Os05g36160:M0329_1.02:CISBP); m=38/266; ncol2=10; w=0; offset=3; strand=D; shift=12; score= 172.8; ------------mCACGTGk--- ; cor=0.946; Ncor=0.541; logoDP=7.470; NsEucl=0.936; NSW=0.967; rcor=45; rNcor=568; rlogoDP=88; rNsEucl=97; rNSW=66; rank_mean=172.800; match_rank=47 a 0 0 0 0 0 0 0 0 0 0 0 0 67 0 99 0 0 1 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 33 99 0 99 1 0 1 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99 0 99 50 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 99 0 50 0 0 0
O11_MA1816.1_JASPAR_rc_shift10 (O11:MA1816.1:JASPAR_rc)	0.838	0.718	6.970	0.929	0.939	314	72	151	131	198	173.200	48	; assembly_6 versus O11_MA1816.1_JASPAR_rc (O11:MA1816.1:JASPAR_rc); m=39/266; ncol2=23; w=0; offset=1; strand=R; shift=10; score= 173.2; ----------sskCACGTGmss- ; cor=0.838; Ncor=0.718; logoDP=6.970; NsEucl=0.929; NSW=0.939; rcor=314; rNcor=72; rlogoDP=151; rNsEucl=131; rNSW=198; rank_mean=173.200; match_rank=48 a 0 0 0 0 0 0 0 0 0 0 1185 1293 964 25 5440 4 3 8 161 1431 1356 1104 0 c 0 0 0 0 0 0 0 0 0 0 1539 1416 1164 5212 12 5435 15 0 61 1901 1400 1632 0 g 0 0 0 0 0 0 0 0 0 0 1631 1392 1901 60 0 17 5439 10 5216 1164 1413 1538 0 t 0 0 0 0 0 0 0 0 0 0 1105 1359 1431 163 8 4 3 5442 22 964 1291 1186 0
ABI5_MA0931.2_JASPAR_shift11 (ABI5:MA0931.2:JASPAR)	0.952	0.544	6.570	0.944	0.975	39	555	191	57	41	176.600	49	; assembly_6 versus ABI5_MA0931.2_JASPAR (ABI5:MA0931.2:JASPAR); m=40/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 176.6; -----------gmCACGTG---- ; cor=0.952; Ncor=0.544; logoDP=6.570; NsEucl=0.944; NSW=0.975; rcor=39; rNcor=555; rlogoDP=191; rNsEucl=57; rNSW=41; rank_mean=176.600; match_rank=49 a 0 0 0 0 0 0 0 0 0 0 0 87 608 0 999 0 0 0 152 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 87 314 922 0 999 0 0 70 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 660 0 78 0 0 999 0 709 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 167 78 0 0 0 0 999 70 0 0 0 0
BHLH168_ZmSPT2_B73_3_m1_EEAD0220_EEADannot_shift10 (BHLH168_ZmSPT2_B73_3_m1:EEAD0220:EEADannot)	0.864	0.679	7.892	0.921	0.931	216	134	53	215	277	179.000		; assembly_6 versus BHLH168_ZmSPT2_B73_3_m1_EEAD0220_EEADannot (BHLH168_ZmSPT2_B73_3_m1:EEAD0220:EEADannot); m=41/266; ncol2=13; w=0; offset=1; strand=D; shift=10; score= 179; ----------gCCCACGTGgc-- ; cor=0.864; Ncor=0.679; logoDP=7.892; NsEucl=0.921; NSW=0.931; rcor=216; rNcor=134; rlogoDP=53; rNsEucl=215; rNSW=277; rank_mean=179.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 19 5 0 0 100 0 3 0 0 9 12 0 0 c 0 0 0 0 0 0 0 0 0 0 15 82 97 100 0 98 0 0 0 22 60 0 0 g 0 0 0 0 0 0 0 0 0 0 56 7 3 0 0 0 97 0 100 55 16 0 0 t 0 0 0 0 0 0 0 0 0 0 10 6 0 0 0 2 0 100 0 14 12 0 0
BZIP68_MA0968.3_JASPAR_shift10 (BZIP68:MA0968.3:JASPAR)	0.881	0.629	6.952	0.924	0.942	152	249	156	177	175	181.800		; assembly_6 versus BZIP68_MA0968.3_JASPAR (BZIP68:MA0968.3:JASPAR); m=42/266; ncol2=15; w=0; offset=1; strand=D; shift=10; score= 181.8; ----------tGCCACGTsa--- ; cor=0.881; Ncor=0.629; logoDP=6.952; NsEucl=0.924; NSW=0.942; rcor=152; rNcor=249; rlogoDP=156; rNsEucl=177; rNSW=175; rank_mean=181.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 51 2 106 0 600 1 2 0 58 327 0 0 0 c 0 0 0 0 0 0 0 0 0 0 126 0 493 598 0 589 4 0 306 1 0 0 0 g 0 0 0 0 0 0 0 0 0 0 42 502 1 0 0 4 594 1 234 143 0 0 0 t 0 0 0 0 0 0 0 0 0 0 381 96 0 2 0 6 0 599 2 129 0 0 0
ABI5.ampDAP_M0204_AthalianaCistrome_shift7 (ABI5.ampDAP:M0204:AthalianaCistrome)	0.841	0.683	7.395	0.928	0.933	297	129	99	135	259	183.800		; assembly_6 versus ABI5.ampDAP_M0204_AthalianaCistrome (ABI5.ampDAP:M0204:AthalianaCistrome); m=43/266; ncol2=13; w=-2; offset=-2; strand=D; shift=7; score= 183.8; -------rrwGrwsACGTGG--- ; cor=0.841; Ncor=0.683; logoDP=7.395; NsEucl=0.928; NSW=0.933; rcor=297; rNcor=129; rlogoDP=99; rNsEucl=135; rNSW=259; rank_mean=183.800; match_rank= a 0 0 0 0 0 0 0 219 211 151 39 153 180 0 583 0 0 1 0 0 0 0 0 c 0 0 0 0 0 0 0 55 79 51 21 124 98 278 0 583 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 173 152 76 404 286 0 295 0 0 583 0 583 447 0 0 0 t 0 0 0 0 0 0 0 136 141 305 119 20 305 10 0 0 0 582 0 136 0 0 0
bHLH77_MA1362.2_JASPAR_shift8 (bHLH77:MA1362.2:JASPAR)	0.856	0.628	7.253	0.926	0.940	235	255	116	152	189	189.400		; assembly_6 versus bHLH77_MA1362.2_JASPAR (bHLH77:MA1362.2:JASPAR); m=45/266; ncol2=11; w=-1; offset=-1; strand=D; shift=8; score= 189.4; --------kwdgbCACGTG---- ; cor=0.856; Ncor=0.628; logoDP=7.253; NsEucl=0.926; NSW=0.940; rcor=235; rNcor=255; rlogoDP=116; rNsEucl=152; rNSW=189; rank_mean=189.400; match_rank= a 0 0 0 0 0 0 0 0 16 31 21 13 0 0 74 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 2 4 13 7 23 75 0 69 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 32 10 22 40 22 0 1 0 75 0 75 0 0 0 0 t 0 0 0 0 0 0 0 0 25 30 19 15 30 0 0 6 0 75 0 0 0 0 0
ABF4_MA1659.1_JASPAR_shift10 (ABF4:MA1659.1:JASPAR)	0.843	0.723	5.416	0.931	0.942	285	65	308	123	171	190.400		; assembly_6 versus ABF4_MA1659.1_JASPAR (ABF4:MA1659.1:JASPAR); m=46/266; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 190.4; ----------tkCCACGTsw--- ; cor=0.843; Ncor=0.723; logoDP=5.416; NsEucl=0.931; NSW=0.942; rcor=285; rNcor=65; rlogoDP=308; rNsEucl=123; rNSW=171; rank_mean=190.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 1452 970 660 135 5906 175 210 121 610 2322 0 0 0 c 0 0 0 0 0 0 0 0 0 0 1325 689 5169 5763 20 5666 166 58 3358 583 0 0 0 g 0 0 0 0 0 0 0 0 0 0 1105 2625 62 86 47 44 5470 52 1825 1360 0 0 0 t 0 0 0 0 0 0 0 0 0 0 2164 1762 155 62 73 161 200 5815 253 1781 0 0 0
bZIP44_1_EEAD0098_EEADannot_rc_shift12 (bZIP44_1:EEAD0098:EEADannot_rc)	0.941	0.672	2.823	0.949	0.974	49	145	676	40	45	191.000		; assembly_6 versus bZIP44_1_EEAD0098_EEADannot_rc (bZIP44_1:EEAD0098:EEADannot_rc); m=47/266; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 191; ------------hsACGTGkCr- ; cor=0.941; Ncor=0.672; logoDP=2.823; NsEucl=0.949; NSW=0.974; rcor=49; rNcor=145; rlogoDP=676; rNsEucl=40; rNSW=45; rank_mean=191.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 184 20 678 0 0 0 0 0 132 300 0 c 0 0 0 0 0 0 0 0 0 0 0 0 245 371 0 666 10 0 0 0 507 113 0 g 0 0 0 0 0 0 0 0 0 0 0 0 29 213 0 0 668 0 678 412 29 171 0 t 0 0 0 0 0 0 0 0 0 0 0 0 220 74 0 12 0 678 0 266 10 94 0
bHLH34.DAP_M0166_AthalianaCistrome_shift5 (bHLH34.DAP:M0166:AthalianaCistrome)	0.902	0.549	6.277	0.952	0.968	107	539	214	34	61	191.000		; assembly_6 versus bHLH34.DAP_M0166_AthalianaCistrome (bHLH34.DAP:M0166:AthalianaCistrome); m=48/266; ncol2=11; w=-4; offset=-4; strand=D; shift=5; score= 191; -----gtgrwwgrCAC------- ; cor=0.902; Ncor=0.549; logoDP=6.277; NsEucl=0.952; NSW=0.968; rcor=107; rNcor=539; rlogoDP=214; rNsEucl=34; rNSW=61; rank_mean=191.000; match_rank= a 0 0 0 0 0 118 123 108 154 180 152 140 205 7 549 0 0 0 0 0 0 0 0 c 0 0 0 0 0 68 69 37 124 119 124 72 135 560 6 567 0 0 0 0 0 0 0 g 0 0 0 0 0 329 62 365 162 101 122 242 153 0 9 0 0 0 0 0 0 0 0 t 0 0 0 0 0 52 313 57 127 167 169 113 74 0 3 0 0 0 0 0 0 0 0
PIL5_M0156_1.02_CISBP_shift11 (PIL5:M0156_1.02:CISBP)	0.875	0.625	5.799	0.926	0.946	166	265	252	147	146	195.200		; assembly_6 versus PIL5_M0156_1.02_CISBP (PIL5:M0156_1.02:CISBP); m=49/266; ncol2=8; w=0; offset=2; strand=D; shift=11; score= 195.2; -----------rbCACGTG---- ; cor=0.875; Ncor=0.625; logoDP=5.799; NsEucl=0.926; NSW=0.946; rcor=166; rNcor=265; rlogoDP=252; rNsEucl=147; rNSW=146; rank_mean=195.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 28 14 2 95 0 9 2 3 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 22 28 95 0 91 0 2 1 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 30 28 1 3 0 91 0 94 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 20 30 2 2 9 0 96 2 0 0 0 0
ABF2_MA0941.1_JASPAR_shift8 (ABF2:MA0941.1:JASPAR)	0.846	0.677	5.310	0.932	0.944	275	137	329	116	159	203.200		; assembly_6 versus ABF2_MA0941.1_JASPAR (ABF2:MA0941.1:JASPAR); m=52/266; ncol2=10; w=-1; offset=-1; strand=D; shift=8; score= 203.2; --------cayrACACGT----- ; cor=0.846; Ncor=0.677; logoDP=5.310; NsEucl=0.932; NSW=0.944; rcor=275; rNcor=137; rlogoDP=329; rNsEucl=116; rNSW=159; rank_mean=203.200; match_rank= a 0 0 0 0 0 0 0 0 231 308 191 274 699 0 999 0 19 19 0 0 0 0 0 c 0 0 0 0 0 0 0 0 308 231 268 120 177 840 0 917 19 19 0 0 0 0 0 g 0 0 0 0 0 0 0 0 231 231 191 403 103 0 0 0 942 19 0 0 0 0 0 t 0 0 0 0 0 0 0 0 231 231 350 202 21 159 0 82 19 942 0 0 0 0 0
bZIP68_MA1347.1_JASPAR_shift10 (bZIP68:MA1347.1:JASPAR)	0.831	0.675	6.962	0.929	0.934	344	141	153	132	251	204.200		; assembly_6 versus bZIP68_MA1347.1_JASPAR (bZIP68:MA1347.1:JASPAR); m=53/266; ncol2=6; w=0; offset=1; strand=D; shift=10; score= 204.2; ----------tGCCAC------- ; cor=0.831; Ncor=0.675; logoDP=6.962; NsEucl=0.929; NSW=0.934; rcor=344; rNcor=141; rlogoDP=153; rNsEucl=132; rNSW=251; rank_mean=204.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 51 2 106 0 600 1 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 126 0 493 598 0 589 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 42 502 1 0 0 4 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 381 96 0 2 0 6 0 0 0 0 0 0 0
ATAREB1_M0256_1.02_CISBP_shift8 (ATAREB1:M0256_1.02:CISBP)	0.846	0.677	5.283	0.932	0.944	276	138	337	115	158	204.800		; assembly_6 versus ATAREB1_M0256_1.02_CISBP (ATAREB1:M0256_1.02:CISBP); m=54/266; ncol2=6; w=-1; offset=-1; strand=D; shift=8; score= 204.8; --------cayrAC--------- ; cor=0.846; Ncor=0.677; logoDP=5.283; NsEucl=0.932; NSW=0.944; rcor=276; rNcor=138; rlogoDP=337; rNsEucl=115; rNSW=158; rank_mean=204.800; match_rank= a 0 0 0 0 0 0 0 0 23 31 19 28 70 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 31 23 27 12 18 84 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 23 23 19 40 10 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 23 23 35 20 2 16 0 0 0 0 0 0 0 0 0
DPBF3_MA1338.3_JASPAR_rc_shift11 (DPBF3:MA1338.3:JASPAR_rc)	0.953	0.749	0.876	0.954	0.976	38	45	880	32	37	206.400		; assembly_6 versus DPBF3_MA1338.3_JASPAR_rc (DPBF3:MA1338.3:JASPAR_rc); m=55/266; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 206.4; -----------GmCACGTGkC-- ; cor=0.953; Ncor=0.749; logoDP=0.876; NsEucl=0.954; NSW=0.976; rcor=38; rNcor=45; rlogoDP=880; rNsEucl=32; rNSW=37; rank_mean=206.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 235 1434 22 2412 6 5 4 11 21 215 0 0 c 0 0 0 0 0 0 0 0 0 0 0 156 671 2041 1 2388 14 5 5 17 2110 0 0 g 0 0 0 0 0 0 0 0 0 0 0 1703 17 269 9 26 2409 1 2407 1580 30 0 0 t 0 0 0 0 0 0 0 0 0 0 0 335 307 97 7 9 1 2419 6 811 74 0 0
bZIP1_2_EEAD0093_EEADannot_rc_shift11 (bZIP1_2:EEAD0093:EEADannot_rc)	0.943	0.741	1.145	0.947	0.969	48	53	829	44	59	206.600		; assembly_6 versus bZIP1_2_EEAD0093_EEADannot_rc (bZIP1_2:EEAD0093:EEADannot_rc); m=56/266; ncol2=9; w=0; offset=2; strand=R; shift=11; score= 206.6; -----------kmCACGTGk--- ; cor=0.943; Ncor=0.741; logoDP=1.145; NsEucl=0.947; NSW=0.969; rcor=48; rNcor=53; rlogoDP=829; rNsEucl=44; rNSW=59; rank_mean=206.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 27 147 0 264 5 1 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 15 116 256 0 258 2 1 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 119 2 0 1 0 262 0 265 174 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 104 0 9 0 2 0 264 0 91 0 0 0
ABI5_M0261_1.02_CISBP_rc_shift12 (ABI5:M0261_1.02:CISBP_rc)	0.932	0.665	2.626	0.945	0.970	62	165	702	49	58	207.200		; assembly_6 versus ABI5_M0261_1.02_CISBP_rc (ABI5:M0261_1.02:CISBP_rc); m=57/266; ncol2=6; w=0; offset=3; strand=R; shift=12; score= 207.2; ------------mCACGT----- ; cor=0.932; Ncor=0.665; logoDP=2.626; NsEucl=0.945; NSW=0.970; rcor=62; rNcor=165; rlogoDP=702; rNsEucl=49; rNSW=58; rank_mean=207.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 34 7 100 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 34 71 0 100 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 16 7 0 0 100 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 16 15 0 0 0 100 0 0 0 0 0
ABF3_MA0930.2_JASPAR_shift13 (ABF3:MA0930.2:JASPAR)	0.886	0.633	4.300	0.933	0.956	139	230	470	111	105	211.000		; assembly_6 versus ABF3_MA0930.2_JASPAR (ABF3:MA0930.2:JASPAR); m=58/266; ncol2=15; w=0; offset=4; strand=D; shift=13; score= 211; -------------caCGTGtCww ; cor=0.886; Ncor=0.633; logoDP=4.300; NsEucl=0.933; NSW=0.956; rcor=139; rNcor=230; rlogoDP=470; rNsEucl=111; rNSW=105; rank_mean=211.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 1414 5658 143 51 339 420 781 662 3106 2541 c 0 0 0 0 0 0 0 0 0 0 0 0 0 3728 606 8374 51 321 296 368 7781 1283 1700 g 0 0 0 0 0 0 0 0 0 0 0 0 0 1502 908 36 8414 381 7845 1935 60 1779 1589 t 0 0 0 0 0 0 0 0 0 0 0 0 0 1948 1420 39 76 7551 31 5508 89 2424 2762
GLYMA-06G314400_MA1808.1_JASPAR_shift13 (GLYMA-06G314400:MA1808.1:JASPAR)	0.909	0.606	4.263	0.939	0.963	93	320	479	83	80	211.000		; assembly_6 versus GLYMA-06G314400_MA1808.1_JASPAR (GLYMA-06G314400:MA1808.1:JASPAR); m=59/266; ncol2=7; w=0; offset=4; strand=D; shift=13; score= 211; -------------caCGTGG--- ; cor=0.909; Ncor=0.606; logoDP=4.263; NsEucl=0.939; NSW=0.963; rcor=93; rNcor=320; rlogoDP=479; rNsEucl=83; rNSW=80; rank_mean=211.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 4908 18522 1272 745 433 595 1246 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 11920 2293 24345 411 530 357 1261 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 5299 3696 1277 25777 207 26215 21101 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 5706 3322 939 900 26663 666 4225 0 0 0
AT1G01260_M0150_1.02_CISBP_shift12 (AT1G01260:M0150_1.02:CISBP)	0.918	0.525	7.599	0.924	0.954	81	621	75	173	115	213.000		; assembly_6 versus AT1G01260_M0150_1.02_CISBP (AT1G01260:M0150_1.02:CISBP); m=60/266; ncol2=8; w=0; offset=3; strand=D; shift=12; score= 213; ------------sCACGTGk--- ; cor=0.918; Ncor=0.525; logoDP=7.599; NsEucl=0.924; NSW=0.954; rcor=81; rNcor=621; rlogoDP=75; rNsEucl=173; rNSW=115; rank_mean=213.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 6 0 100 0 0 0 0 13 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 28 100 0 100 0 0 0 7 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0 100 0 100 27 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 100 0 53 0 0 0
bHLH74_MA1360.3_JASPAR_shift13 (bHLH74:MA1360.3:JASPAR)	0.999	0.428	7.429	0.968	0.994	2	960	94	11	9	215.200		; assembly_6 versus bHLH74_MA1360.3_JASPAR (bHLH74:MA1360.3:JASPAR); m=61/266; ncol2=8; w=0; offset=4; strand=D; shift=13; score= 215.2; -------------CACGTG---- ; cor=0.999; Ncor=0.428; logoDP=7.429; NsEucl=0.968; NSW=0.994; rcor=2; rNcor=960; rlogoDP=94; rNsEucl=11; rNSW=9; rank_mean=215.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 439 0 3 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 438 0 436 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 436 0 438 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 3 0 439 1 0 0 0 0
BPE_MA1359.3_JASPAR_shift13 (BPE:MA1359.3:JASPAR)	0.999	0.428	7.235	0.971	0.995	1	959	120	7	7	218.800		; assembly_6 versus BPE_MA1359.3_JASPAR (BPE:MA1359.3:JASPAR); m=62/266; ncol2=8; w=0; offset=4; strand=D; shift=13; score= 218.8; -------------CACGTG---- ; cor=0.999; Ncor=0.428; logoDP=7.235; NsEucl=0.971; NSW=0.995; rcor=1; rNcor=959; rlogoDP=120; rNsEucl=7; rNSW=7; rank_mean=218.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 1 396 0 9 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 393 0 388 0 0 2 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 387 0 393 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 396 1 0 0 0 0
GBF1_M0268_1.02_CISBP_shift12 (GBF1:M0268_1.02:CISBP)	0.889	0.635	3.966	0.932	0.954	135	226	519	114	114	221.600		; assembly_6 versus GBF1_M0268_1.02_CISBP (GBF1:M0268_1.02:CISBP); m=63/266; ncol2=9; w=0; offset=3; strand=D; shift=12; score= 221.6; ------------ysACGTGkm-- ; cor=0.889; Ncor=0.635; logoDP=3.966; NsEucl=0.932; NSW=0.954; rcor=135; rNcor=226; rlogoDP=519; rNsEucl=114; rNSW=114; rank_mean=221.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 20 6 86 2 6 2 5 0 28 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 33 32 4 78 14 3 0 5 54 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 7 40 5 11 76 0 95 61 10 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 40 22 5 9 4 95 0 34 8 0 0
O11_MA1816.2_JASPAR_rc_shift13 (O11:MA1816.2:JASPAR_rc)	0.998	0.428	6.962	0.972	0.995	3	961	152	5	5	225.200		; assembly_6 versus O11_MA1816.2_JASPAR_rc (O11:MA1816.2:JASPAR_rc); m=65/266; ncol2=15; w=0; offset=4; strand=R; shift=13; score= 225.2; -------------CACGTG---- ; cor=0.998; Ncor=0.428; logoDP=6.962; NsEucl=0.972; NSW=0.995; rcor=3; rNcor=961; rlogoDP=152; rNsEucl=5; rNSW=5; rank_mean=225.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 25 5440 4 3 8 161 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 5212 12 5435 15 0 61 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 60 0 17 5439 10 5216 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 163 8 4 3 5442 22 0 0 0 0
PIF1_MA0552.2_JASPAR_shift13 (PIF1:MA0552.2:JASPAR)	0.997	0.427	7.023	0.970	0.995	5	966	145	9	8	226.600		; assembly_6 versus PIF1_MA0552.2_JASPAR (PIF1:MA0552.2:JASPAR); m=66/266; ncol2=11; w=0; offset=4; strand=D; shift=13; score= 226.6; -------------CACGTG---- ; cor=0.997; Ncor=0.427; logoDP=7.023; NsEucl=0.970; NSW=0.995; rcor=5; rNcor=966; rlogoDP=145; rNsEucl=9; rNSW=8; rank_mean=226.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 114 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 103 0 113 0 2 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 1 114 0 114 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 112 0 0 0 0 0
BZIP92_B73_1_m1_EEAD0311_EEADannot_rc_shift11 (BZIP92_B73_1_m1:EEAD0311:EEADannot_rc)	0.865	0.618	7.100	0.918	0.932	209	281	137	251	261	227.800		; assembly_6 versus BZIP92_B73_1_m1_EEAD0311_EEADannot_rc (BZIP92_B73_1_m1:EEAD0311:EEADannot_rc); m=67/266; ncol2=8; w=0; offset=2; strand=R; shift=11; score= 227.8; -----------GCCACGTs---- ; cor=0.865; Ncor=0.618; logoDP=7.100; NsEucl=0.918; NSW=0.932; rcor=209; rNcor=281; rlogoDP=137; rNsEucl=251; rNSW=261; rank_mean=227.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 17 0 100 0 2 0 3 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 1 83 100 0 99 1 0 57 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0 0 96 0 40 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 1 1 100 0 0 0 0 0
BHLH72_MA1364.2_JASPAR_rc_shift12 (BHLH72:MA1364.2:JASPAR_rc)	0.980	0.630	1.103	0.963	0.988	22	246	837	18	22	229.000		; assembly_6 versus BHLH72_MA1364.2_JASPAR_rc (BHLH72:MA1364.2:JASPAR_rc); m=68/266; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 229; ------------cCACGTGGs-- ; cor=0.980; Ncor=0.630; logoDP=1.103; NsEucl=0.963; NSW=0.988; rcor=22; rNcor=246; rlogoDP=837; rNsEucl=18; rNSW=22; rank_mean=229.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 18 2 112 0 6 0 0 19 13 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 65 110 0 112 0 0 0 4 66 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 106 0 112 85 29 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 112 0 4 4 0 0
BIM2_MA0965.3_JASPAR_shift13 (BIM2:MA0965.3:JASPAR)	0.998	0.428	6.817	0.972	0.995	4	963	169	6	6	229.600		; assembly_6 versus BIM2_MA0965.3_JASPAR (BIM2:MA0965.3:JASPAR); m=69/266; ncol2=9; w=0; offset=4; strand=D; shift=13; score= 229.6; -------------CACGTG---- ; cor=0.998; Ncor=0.428; logoDP=6.817; NsEucl=0.972; NSW=0.995; rcor=4; rNcor=963; rlogoDP=169; rNsEucl=6; rNSW=6; rank_mean=229.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 28 10091 16 162 84 36 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 10294 36 10174 23 165 20 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 20 166 23 10179 36 10294 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 36 85 165 14 10093 28 0 0 0 0
bZIP28_MA1344.1_JASPAR_shift7 (bZIP28:MA1344.1:JASPAR)	0.818	0.665	6.876	0.927	0.931	408	166	160	142	290	233.200		; assembly_6 versus bZIP28_MA1344.1_JASPAR (bZIP28:MA1344.1:JASPAR); m=71/266; ncol2=15; w=-2; offset=-2; strand=D; shift=7; score= 233.2; -------dwwgrtsACGTGKCa- ; cor=0.818; Ncor=0.665; logoDP=6.876; NsEucl=0.927; NSW=0.931; rcor=408; rNcor=166; rlogoDP=160; rNsEucl=142; rNSW=290; rank_mean=233.200; match_rank= a 0 0 0 0 0 0 0 177 172 138 125 249 127 1 546 0 4 0 6 0 89 302 0 c 0 0 0 0 0 0 0 65 108 90 39 69 79 181 0 544 0 0 0 0 431 42 0 g 0 0 0 0 0 0 0 147 103 91 254 174 3 315 2 0 544 0 542 407 1 118 0 t 0 0 0 0 0 0 0 159 165 229 130 56 339 51 0 4 0 548 0 141 27 86 0
SPT_MA1061.2_JASPAR_shift12 (SPT:MA1061.2:JASPAR)	0.978	0.489	5.291	0.959	0.988	25	761	334	27	20	233.400		; assembly_6 versus SPT_MA1061.2_JASPAR (SPT:MA1061.2:JASPAR); m=72/266; ncol2=15; w=0; offset=3; strand=D; shift=12; score= 233.4; ------------sCACGTG---- ; cor=0.978; Ncor=0.489; logoDP=5.291; NsEucl=0.959; NSW=0.988; rcor=25; rNcor=761; rlogoDP=334; rNsEucl=27; rNSW=20; rank_mean=233.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 47 0 885 9 88 0 84 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 568 961 0 910 0 12 115 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 255 0 99 0 912 0 724 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 129 39 16 80 0 988 76 0 0 0 0
GLYMA-13G317000_MA1811.2_JASPAR_shift14 (GLYMA-13G317000:MA1811.2:JASPAR)	0.948	0.542	4.398	0.944	0.974	42	564	462	58	42	233.600		; assembly_6 versus GLYMA-13G317000_MA1811.2_JASPAR (GLYMA-13G317000:MA1811.2:JASPAR); m=73/266; ncol2=6; w=0; offset=5; strand=D; shift=14; score= 233.6; --------------aCGTGG--- ; cor=0.948; Ncor=0.542; logoDP=4.398; NsEucl=0.944; NSW=0.974; rcor=42; rNcor=564; rlogoDP=462; rNsEucl=58; rNSW=42; rank_mean=233.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12296 660 370 310 434 791 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1390 16694 182 369 269 895 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2539 566 17411 140 17185 13599 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2107 412 369 17513 444 3047 0 0 0
UNE10_M0158_1.02_CISBP_shift12 (UNE10:M0158_1.02:CISBP)	0.909	0.520	7.594	0.920	0.949	94	641	76	227	133	234.200		; assembly_6 versus UNE10_M0158_1.02_CISBP (UNE10:M0158_1.02:CISBP); m=74/266; ncol2=11; w=0; offset=3; strand=D; shift=12; score= 234.2; ------------cCACGTGm--- ; cor=0.909; Ncor=0.520; logoDP=7.594; NsEucl=0.920; NSW=0.949; rcor=94; rNcor=641; rlogoDP=76; rNsEucl=227; rNSW=133; rank_mean=234.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 21 0 100 0 0 0 0 27 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 50 100 0 100 0 0 0 53 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 100 0 100 7 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 100 0 13 0 0 0
UNE10_MA1074.1_JASPAR_shift12 (UNE10:MA1074.1:JASPAR)	0.909	0.519	7.594	0.920	0.949	95	642	77	228	135	235.400		; assembly_6 versus UNE10_MA1074.1_JASPAR (UNE10:MA1074.1:JASPAR); m=75/266; ncol2=11; w=0; offset=3; strand=D; shift=12; score= 235.4; ------------cCACGTGm--- ; cor=0.909; Ncor=0.519; logoDP=7.594; NsEucl=0.920; NSW=0.949; rcor=95; rNcor=642; rlogoDP=77; rNsEucl=228; rNSW=135; rank_mean=235.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 214 0 999 0 0 0 0 267 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 499 999 0 999 0 0 0 533 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 72 0 0 0 999 0 999 67 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 214 0 0 0 0 999 0 134 0 0 0
SPT_M0162_1.02_CISBP_shift11 (SPT:M0162_1.02:CISBP)	0.893	0.574	5.272	0.926	0.951	128	446	340	144	124	236.400		; assembly_6 versus SPT_M0162_1.02_CISBP (SPT:M0162_1.02:CISBP); m=76/266; ncol2=17; w=0; offset=2; strand=D; shift=11; score= 236.4; -----------csCACGTGc--- ; cor=0.893; Ncor=0.574; logoDP=5.272; NsEucl=0.926; NSW=0.951; rcor=128; rNcor=446; rlogoDP=340; rNsEucl=144; rNSW=124; rank_mean=236.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 20 5 0 88 1 9 0 8 22 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 43 57 96 0 91 0 1 12 30 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 21 26 0 10 0 91 0 72 24 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 16 12 4 2 8 0 99 8 24 0 0 0
At5g46760_MA0568.1_JASPAR_shift12 (At5g46760:MA0568.1:JASPAR)	0.919	0.525	5.518	0.930	0.960	80	620	292	128	86	241.200		; assembly_6 versus At5g46760_MA0568.1_JASPAR (At5g46760:MA0568.1:JASPAR); m=77/266; ncol2=12; w=0; offset=3; strand=D; shift=12; score= 241.2; ------------vCACGTGb--- ; cor=0.919; Ncor=0.525; logoDP=5.518; NsEucl=0.930; NSW=0.960; rcor=80; rNcor=620; rlogoDP=292; rNsEucl=128; rNSW=86; rank_mean=241.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 25 10 97 0 16 1 0 7 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 28 89 0 84 0 2 0 40 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 40 0 2 0 84 0 89 28 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 7 0 1 16 0 97 10 25 0 0 0
PACE_EEAD0576_EEADannot_rc_shift8 (PACE:EEAD0576:EEADannot_rc)	0.871	0.813	1.542	0.938	0.946	186	19	787	88	147	245.400		; assembly_6 versus PACE_EEAD0576_EEADannot_rc (PACE:EEAD0576:EEADannot_rc); m=78/266; ncol2=8; w=-1; offset=-1; strand=R; shift=8; score= 245.4; --------wkyGCCAC------- ; cor=0.871; Ncor=0.813; logoDP=1.542; NsEucl=0.938; NSW=0.946; rcor=186; rNcor=19; rlogoDP=787; rNsEucl=88; rNSW=147; rank_mean=245.400; match_rank= a 0 0 0 0 0 0 0 0 9 3 2 0 3 0 26 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 6 3 17 0 23 26 0 21 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 1 9 0 25 0 0 0 1 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 10 11 7 1 0 0 0 4 0 0 0 0 0 0 0
NFYC2_UN0690.1_JASPAR_rc_shift8 (NFYC2:UN0690.1:JASPAR_rc)	0.935	0.624	1.217	0.948	0.973	56	269	817	43	46	246.200		; assembly_6 versus NFYC2_UN0690.1_JASPAR_rc (NFYC2:UN0690.1:JASPAR_rc); m=79/266; ncol2=6; w=-1; offset=-1; strand=R; shift=8; score= 246.2; --------wwTGCC--------- ; cor=0.935; Ncor=0.624; logoDP=1.217; NsEucl=0.948; NSW=0.973; rcor=56; rNcor=269; rlogoDP=817; rNsEucl=43; rNSW=46; rank_mean=246.200; match_rank= a 0 0 0 0 0 0 0 0 1365 1384 431 110 903 86 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 876 948 508 174 3438 4421 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 966 882 184 4053 103 53 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 1473 1466 3557 343 236 120 0 0 0 0 0 0 0 0 0
PIF4_MA0561.1_JASPAR_rc_shift11 (PIF4:MA0561.1:JASPAR_rc)	0.979	0.559	2.839	0.960	0.988	23	506	668	24	23	248.800		; assembly_6 versus PIF4_MA0561.1_JASPAR_rc (PIF4:MA0561.1:JASPAR_rc); m=80/266; ncol2=8; w=0; offset=2; strand=R; shift=11; score= 248.8; -----------gsCACGTG---- ; cor=0.979; Ncor=0.559; logoDP=2.839; NsEucl=0.960; NSW=0.988; rcor=23; rNcor=506; rlogoDP=668; rNsEucl=24; rNSW=23; rank_mean=248.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 53 0 335 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 65 183 335 0 286 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 206 99 0 0 0 335 0 335 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0 49 0 335 0 0 0 0 0
BZIP28_MA1344.2_JASPAR_shift12 (BZIP28:MA1344.2:JASPAR)	0.855	0.611	6.849	0.917	0.931	243	305	162	260	276	249.200		; assembly_6 versus BZIP28_MA1344.2_JASPAR (BZIP28:MA1344.2:JASPAR); m=81/266; ncol2=7; w=0; offset=3; strand=D; shift=12; score= 249.2; ------------tsACGTG---- ; cor=0.855; Ncor=0.611; logoDP=6.849; NsEucl=0.917; NSW=0.931; rcor=243; rNcor=305; rlogoDP=162; rNsEucl=260; rNSW=276; rank_mean=249.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 127 1 546 0 4 0 6 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 79 181 0 544 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 3 315 2 0 544 0 542 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 339 51 0 4 0 548 0 0 0 0 0
ABF1_ABF1_Athamap_shift12 (ABF1:ABF1:Athamap)	0.897	0.577	8.409	0.911	0.929	117	434	29	360	307	249.400		; assembly_6 versus ABF1_ABF1_Athamap (ABF1:ABF1:Athamap); m=82/266; ncol2=11; w=0; offset=3; strand=D; shift=12; score= 249.4; ------------ACACGTGGC-- ; cor=0.897; Ncor=0.577; logoDP=8.409; NsEucl=0.911; NSW=0.929; rcor=117; rNcor=434; rlogoDP=29; rNsEucl=360; rNSW=307; rank_mean=249.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 20 0 20 0 0 0 0 0 1 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 20 0 0 0 0 19 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 20 17 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 3 0 0 0
NF-YB9_UN0822.1_JASPAR_rc_shift13 (NF-YB9:UN0822.1:JASPAR_rc)	0.991	0.425	5.866	0.968	0.994	10	979	244	13	10	251.200		; assembly_6 versus NF-YB9_UN0822.1_JASPAR_rc (NF-YB9:UN0822.1:JASPAR_rc); m=83/266; ncol2=15; w=0; offset=4; strand=R; shift=13; score= 251.2; -------------CACGTG---- ; cor=0.991; Ncor=0.425; logoDP=5.866; NsEucl=0.968; NSW=0.994; rcor=10; rNcor=979; rlogoDP=244; rNsEucl=13; rNSW=10; rank_mean=251.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 20 8402 0 32 352 319 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 9256 66 9578 0 793 4 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 6 795 0 9581 54 9270 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 331 350 35 0 8414 20 0 0 0 0
bHLH69_MA1363.1_JASPAR_shift4 (bHLH69:MA1363.1:JASPAR)	0.896	0.472	7.344	0.931	0.953	120	822	107	120	120	257.800		; assembly_6 versus bHLH69_MA1363.1_JASPAR (bHLH69:MA1363.1:JASPAR); m=84/266; ncol2=6; w=-5; offset=-5; strand=D; shift=4; score= 257.8; ----CgTGyk------------- ; cor=0.896; Ncor=0.472; logoDP=7.344; NsEucl=0.931; NSW=0.953; rcor=120; rNcor=822; rlogoDP=107; rNsEucl=120; rNSW=120; rank_mean=257.800; match_rank= a 0 0 0 0 1 6 3 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 27 1 2 1 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 5 23 5 25 8 13 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 1 4 24 3 11 16 0 0 0 0 0 0 0 0 0 0 0 0 0
GBF3.ampDAP_M0192_AthalianaCistrome_rc_shift10 (GBF3.ampDAP:M0192:AthalianaCistrome_rc)	0.880	0.715	0.785	0.942	0.957	154	78	891	67	99	257.800		; assembly_6 versus GBF3.ampDAP_M0192_AthalianaCistrome_rc (GBF3.ampDAP:M0192:AthalianaCistrome_rc); m=85/266; ncol2=6; w=0; offset=1; strand=R; shift=10; score= 257.8; ----------tGMCAC------- ; cor=0.880; Ncor=0.715; logoDP=0.785; NsEucl=0.942; NSW=0.957; rcor=154; rNcor=78; rlogoDP=891; rNsEucl=67; rNSW=99; rank_mean=257.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 96 21 142 0 535 7 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 120 2 390 536 1 505 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 53 386 4 0 0 10 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 267 127 0 0 0 14 0 0 0 0 0 0 0
MYC3_MA0568.2_JASPAR_shift13 (MYC3:MA0568.2:JASPAR)	0.993	0.426	5.482	0.975	0.996	9	976	298	4	4	258.200		; assembly_6 versus MYC3_MA0568.2_JASPAR (MYC3:MA0568.2:JASPAR); m=86/266; ncol2=8; w=0; offset=4; strand=D; shift=13; score= 258.2; -------------CACGTG---- ; cor=0.993; Ncor=0.426; logoDP=5.482; NsEucl=0.975; NSW=0.996; rcor=9; rNcor=976; rlogoDP=298; rNsEucl=4; rNSW=4; rank_mean=258.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 10 97 0 16 1 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 89 0 84 0 2 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 84 0 89 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 0 97 10 0 0 0 0
GBF3_MA1351.2_JASPAR_rc_shift8 (GBF3:MA1351.2:JASPAR_rc)	0.925	0.616	1.163	0.944	0.968	72	286	828	55	60	260.200		; assembly_6 versus GBF3_MA1351.2_JASPAR_rc (GBF3:MA1351.2:JASPAR_rc); m=88/266; ncol2=6; w=-1; offset=-1; strand=R; shift=8; score= 260.2; --------wwTGCC--------- ; cor=0.925; Ncor=0.616; logoDP=1.163; NsEucl=0.944; NSW=0.968; rcor=72; rNcor=286; rlogoDP=828; rNsEucl=55; rNSW=60; rank_mean=260.200; match_rank= a 0 0 0 0 0 0 0 0 2745 2883 801 228 1454 131 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 1879 1943 831 275 7410 9137 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 1909 1756 400 8130 212 60 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 2928 2879 7429 828 385 133 0 0 0 0 0 0 0 0 0
LOC_Os02g49560_M0327_1.02_CISBP_rc_shift11 (LOC_Os02g49560:M0327_1.02:CISBP_rc)	0.902	0.708	0.574	0.939	0.960	109	97	930	82	91	261.800		; assembly_6 versus LOC_Os02g49560_M0327_1.02_CISBP_rc (LOC_Os02g49560:M0327_1.02:CISBP_rc); m=89/266; ncol2=19; w=0; offset=2; strand=R; shift=11; score= 261.8; -----------rwCACGTGgma- ; cor=0.902; Ncor=0.708; logoDP=0.574; NsEucl=0.939; NSW=0.960; rcor=109; rNcor=97; rlogoDP=930; rNsEucl=82; rNSW=91; rank_mean=261.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 29 47 2 100 0 0 0 0 12 25 33 0 c 0 0 0 0 0 0 0 0 0 0 0 21 19 73 0 100 0 0 7 4 39 22 0 g 0 0 0 0 0 0 0 0 0 0 0 29 7 22 0 0 100 0 93 64 18 23 0 t 0 0 0 0 0 0 0 0 0 0 0 21 27 3 0 0 0 100 0 20 18 22 0
bHLH18_MA1361.1_JASPAR_shift4 (bHLH18:MA1361.1:JASPAR)	0.852	0.538	6.450	0.931	0.943	252	577	200	119	165	262.600		; assembly_6 versus bHLH18_MA1361.1_JASPAR (bHLH18:MA1361.1:JASPAR); m=90/266; ncol2=15; w=-5; offset=-5; strand=D; shift=4; score= 262.6; ----crYGtkwwhCACGTG---- ; cor=0.852; Ncor=0.538; logoDP=6.450; NsEucl=0.931; NSW=0.943; rcor=252; rNcor=577; rlogoDP=200; rNsEucl=119; rNSW=165; rank_mean=262.600; match_rank= a 0 0 0 0 34 109 0 38 28 12 60 55 61 11 193 0 9 7 0 0 0 0 0 c 0 0 0 0 128 2 143 4 32 13 15 27 61 190 0 199 0 3 0 0 0 0 0 g 0 0 0 0 20 58 7 153 8 116 29 31 15 0 4 0 192 0 197 0 0 0 0 t 0 0 0 0 19 32 51 6 133 60 97 88 64 0 4 2 0 191 4 0 0 0 0
ABF1_MA0570.2_JASPAR_rc_shift8 (ABF1:MA0570.2:JASPAR_rc)	0.927	0.680	0.284	0.946	0.968	65	132	1012	47	65	264.200		; assembly_6 versus ABF1_MA0570.2_JASPAR_rc (ABF1:MA0570.2:JASPAR_rc); m=91/266; ncol2=9; w=-1; offset=-1; strand=R; shift=8; score= 264.2; --------wwTGmCACG------ ; cor=0.927; Ncor=0.680; logoDP=0.284; NsEucl=0.946; NSW=0.968; rcor=65; rNcor=132; rlogoDP=1012; rNsEucl=47; rNSW=65; rank_mean=264.200; match_rank= a 0 0 0 0 0 0 0 0 345 364 79 33 384 6 1128 9 17 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 225 234 117 28 707 1123 1 1107 15 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 213 195 36 999 11 3 8 9 1099 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 358 348 909 81 39 9 4 16 10 0 0 0 0 0 0
LEC1-A_UN0422.2_JASPAR_shift14 (LEC1-A:UN0422.2:JASPAR)	0.934	0.534	3.824	0.939	0.970	58	588	541	85	56	265.600		; assembly_6 versus LEC1-A_UN0422.2_JASPAR (LEC1-A:UN0422.2:JASPAR); m=92/266; ncol2=15; w=0; offset=5; strand=D; shift=14; score= 265.6; --------------aCGTGGCA- ; cor=0.934; Ncor=0.534; logoDP=3.824; NsEucl=0.939; NSW=0.970; rcor=58; rNcor=588; rlogoDP=541; rNsEucl=85; rNSW=56; rank_mean=265.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9508 942 609 452 567 892 1110 12833 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1783 14394 207 435 401 820 14415 887 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2775 501 15158 174 15073 12672 672 1497 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2477 706 569 15482 502 2159 346 1326 0
URI_MA2342.1_JASPAR_shift13 (URI:MA2342.1:JASPAR)	0.997	0.427	5.166	0.982	0.998	6	967	354	1	1	265.800		; assembly_6 versus URI_MA2342.1_JASPAR (URI:MA2342.1:JASPAR); m=93/266; ncol2=15; w=0; offset=4; strand=D; shift=13; score= 265.8; -------------CACGTG---- ; cor=0.997; Ncor=0.427; logoDP=5.166; NsEucl=0.982; NSW=0.998; rcor=6; rNcor=967; rlogoDP=354; rNsEucl=1; rNSW=1; rank_mean=265.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 51 1660 30 96 60 34 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 1731 11 1714 10 121 34 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 34 118 10 1714 11 1731 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 34 61 96 30 1658 51 0 0 0 0
gw1.270.82.1_M0252_1.02_CISBP_shift12 (gw1.270.82.1:M0252_1.02:CISBP)	0.898	0.513	7.380	0.916	0.943	115	671	102	280	163	266.200		; assembly_6 versus gw1.270.82.1_M0252_1.02_CISBP (gw1.270.82.1:M0252_1.02:CISBP); m=94/266; ncol2=15; w=0; offset=3; strand=D; shift=12; score= 266.2; ------------cCACGTGc--- ; cor=0.898; Ncor=0.513; logoDP=7.380; NsEucl=0.916; NSW=0.943; rcor=115; rNcor=671; rlogoDP=102; rNsEucl=280; rNSW=163; rank_mean=266.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 15 0 100 0 5 0 0 14 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 46 100 0 100 0 0 0 64 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 95 0 100 8 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 100 0 14 0 0 0
GBF1_MA2389.1_JASPAR_shift14 (GBF1:MA2389.1:JASPAR)	0.981	0.491	3.907	0.961	0.989	20	750	527	21	16	266.800		; assembly_6 versus GBF1_MA2389.1_JASPAR (GBF1:MA2389.1:JASPAR); m=95/266; ncol2=11; w=0; offset=5; strand=D; shift=14; score= 266.8; --------------ACGTGkm-- ; cor=0.981; Ncor=0.491; logoDP=3.907; NsEucl=0.961; NSW=0.989; rcor=20; rNcor=750; rlogoDP=527; rNsEucl=21; rNSW=16; rank_mean=266.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 863 16 57 20 45 0 279 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 783 135 26 2 51 535 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54 111 756 4 954 610 102 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47 89 49 948 0 338 81 0 0
GLYMA-13G317000_MA1811.1_JASPAR_rc_shift8 (GLYMA-13G317000:MA1811.1:JASPAR_rc)	0.916	0.610	1.236	0.941	0.966	83	306	812	71	72	268.800		; assembly_6 versus GLYMA-13G317000_MA1811.1_JASPAR_rc (GLYMA-13G317000:MA1811.1:JASPAR_rc); m=96/266; ncol2=8; w=-1; offset=-1; strand=R; shift=8; score= 268.8; --------wrTGCCAC------- ; cor=0.916; Ncor=0.610; logoDP=1.236; NsEucl=0.941; NSW=0.966; rcor=83; rNcor=306; rlogoDP=812; rNsEucl=71; rNSW=72; rank_mean=268.800; match_rank= a 0 0 0 0 0 0 0 0 4757 4848 1331 379 3047 444 17513 369 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 4336 4253 1636 626 13599 17185 140 17411 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 4354 4702 966 16137 895 269 369 182 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 4885 4529 14399 1190 791 434 310 370 0 0 0 0 0 0 0
AREB3.ampDAP_M0218_AthalianaCistrome_rc_shift10 (AREB3.ampDAP:M0218:AthalianaCistrome_rc)	0.874	0.710	1.060	0.935	0.945	173	92	841	102	151	271.800		; assembly_6 versus AREB3.ampDAP_M0218_AthalianaCistrome_rc (AREB3.ampDAP:M0218:AthalianaCistrome_rc); m=97/266; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 271.8; ----------TGMCACGTswc-- ; cor=0.874; Ncor=0.710; logoDP=1.060; NsEucl=0.935; NSW=0.945; rcor=173; rNcor=92; rlogoDP=841; rNsEucl=102; rNSW=151; rank_mean=271.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 23 0 168 0 593 0 0 0 10 238 32 0 0 c 0 0 0 0 0 0 0 0 0 0 57 0 425 593 0 593 1 0 227 0 352 0 0 g 0 0 0 0 0 0 0 0 0 0 39 590 0 0 0 0 592 0 356 83 79 0 0 t 0 0 0 0 0 0 0 0 0 0 474 3 0 0 0 0 0 593 0 272 130 0 0
SPCH_UN0823.1_JASPAR_rc_shift13 (SPCH:UN0823.1:JASPAR_rc)	0.986	0.423	5.350	0.963	0.992	15	994	320	19	13	272.200		; assembly_6 versus SPCH_UN0823.1_JASPAR_rc (SPCH:UN0823.1:JASPAR_rc); m=98/266; ncol2=11; w=0; offset=4; strand=R; shift=13; score= 272.2; -------------CACGTG---- ; cor=0.986; Ncor=0.423; logoDP=5.350; NsEucl=0.963; NSW=0.992; rcor=15; rNcor=994; rlogoDP=320; rNsEucl=19; rNSW=13; rank_mean=272.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 46 8075 8 40 655 441 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 9277 104 9763 2 965 32 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 34 978 2 9763 99 9301 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 456 656 40 8 8094 39 0 0 0 0
PHYPADRAFT_143875_MA0988.2_JASPAR_shift13 (PHYPADRAFT_143875:MA0988.2:JASPAR)	0.996	0.427	5.046	0.980	0.998	7	969	382	2	2	272.400		; assembly_6 versus PHYPADRAFT_143875_MA0988.2_JASPAR (PHYPADRAFT_143875:MA0988.2:JASPAR); m=99/266; ncol2=7; w=0; offset=4; strand=D; shift=13; score= 272.4; -------------CACGTG---- ; cor=0.996; Ncor=0.427; logoDP=5.046; NsEucl=0.980; NSW=0.998; rcor=7; rNcor=969; rlogoDP=382; rNsEucl=2; rNSW=2; rank_mean=272.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 106 923 22 39 66 38 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 844 0 940 0 10 12 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 12 10 0 940 0 844 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 38 66 39 22 923 106 0 0 0 0
PHYPADRAFT_48267_MA1021.1_JASPAR_shift12 (PHYPADRAFT_48267:MA1021.1:JASPAR)	0.897	0.513	7.229	0.916	0.943	119	672	121	287	168	273.400		; assembly_6 versus PHYPADRAFT_48267_MA1021.1_JASPAR (PHYPADRAFT_48267:MA1021.1:JASPAR); m=100/266; ncol2=12; w=0; offset=3; strand=D; shift=12; score= 273.4; ------------cCACGTGc--- ; cor=0.897; Ncor=0.513; logoDP=7.229; NsEucl=0.916; NSW=0.943; rcor=119; rNcor=672; rlogoDP=121; rNsEucl=287; rNSW=168; rank_mean=273.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 154 1 998 1 53 1 1 143 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 461 998 1 998 1 1 1 642 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 154 1 1 1 946 1 998 72 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 231 1 1 1 1 998 1 143 0 0 0
0300010311_M0363_1.02_CISBP_shift11 (0300010311:M0363_1.02:CISBP)	0.821	0.645	6.316	0.919	0.928	396	208	206	242	321	274.600		; assembly_6 versus 0300010311_M0363_1.02_CISBP (0300010311:M0363_1.02:CISBP); m=101/266; ncol2=18; w=0; offset=2; strand=D; shift=11; score= 274.6; -----------rtsACGTGgca- ; cor=0.821; Ncor=0.645; logoDP=6.316; NsEucl=0.919; NSW=0.928; rcor=396; rNcor=208; rlogoDP=206; rNsEucl=242; rNSW=321; rank_mean=274.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 29 23 3 100 0 0 0 0 13 19 34 0 c 0 0 0 0 0 0 0 0 0 0 0 21 13 38 0 100 0 0 10 4 41 22 0 g 0 0 0 0 0 0 0 0 0 0 0 29 6 56 0 0 100 0 90 60 20 22 0 t 0 0 0 0 0 0 0 0 0 0 0 21 58 3 0 0 0 100 0 23 20 22 0
BIM3_MA0966.2_JASPAR_shift13 (BIM3:MA0966.2:JASPAR)	0.996	0.427	4.938	0.979	0.997	8	970	400	3	3	276.800		; assembly_6 versus BIM3_MA0966.2_JASPAR (BIM3:MA0966.2:JASPAR); m=102/266; ncol2=8; w=0; offset=4; strand=D; shift=13; score= 276.8; -------------CACGTG---- ; cor=0.996; Ncor=0.427; logoDP=4.938; NsEucl=0.979; NSW=0.997; rcor=8; rNcor=970; rlogoDP=400; rNsEucl=3; rNSW=3; rank_mean=276.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 74 942 15 67 33 96 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 821 0 918 0 25 8 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 8 25 0 918 0 821 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 96 33 67 15 942 74 0 0 0 0
BIM2.ampDAP_M0156_AthalianaCistrome_shift0 (BIM2.ampDAP:M0156:AthalianaCistrome)	0.924	0.402	7.148	0.942	0.967	74	1077	133	68	68	284.000		; assembly_6 versus BIM2.ampDAP_M0156_AthalianaCistrome (BIM2.ampDAP:M0156:AthalianaCistrome); m=103/266; ncol2=17; w=-9; offset=-9; strand=D; shift=0; score= 284; rsmrsgtgwrwgkCACG------ ; cor=0.924; Ncor=0.402; logoDP=7.148; NsEucl=0.942; NSW=0.967; rcor=74; rNcor=1077; rlogoDP=133; rNsEucl=68; rNSW=68; rank_mean=284.000; match_rank= a 164 123 168 216 80 133 81 124 167 190 150 136 115 0 581 0 23 0 0 0 0 0 0 c 93 183 197 111 248 75 139 92 146 87 110 96 70 584 0 583 0 0 0 0 0 0 0 g 189 167 94 148 162 286 124 284 113 177 127 291 218 0 4 0 562 0 0 0 0 0 0 t 139 112 126 110 95 91 241 85 159 131 198 62 182 1 0 2 0 0 0 0 0 0 0
BZIP96_Mo17_1_EEAD0316_EEADannot_shift10 (BZIP96_Mo17_1:EEAD0316:EEADannot)	0.802	0.652	6.438	0.923	0.924	494	188	201	182	375	288.000		; assembly_6 versus BZIP96_Mo17_1_EEAD0316_EEADannot (BZIP96_Mo17_1:EEAD0316:EEADannot); m=104/266; ncol2=11; w=0; offset=1; strand=D; shift=10; score= 288; ----------tGCCACGTsay-- ; cor=0.802; Ncor=0.652; logoDP=6.438; NsEucl=0.923; NSW=0.924; rcor=494; rNcor=188; rlogoDP=201; rNsEucl=182; rNSW=375; rank_mean=288.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 5 1 24 0 100 0 4 0 7 59 9 0 0 c 0 0 0 0 0 0 0 0 0 0 20 1 76 100 0 95 8 1 61 3 40 0 0 g 0 0 0 0 0 0 0 0 0 0 19 90 0 0 0 1 88 0 32 17 20 0 0 t 0 0 0 0 0 0 0 0 0 0 56 8 0 0 0 4 0 99 0 21 31 0 0
GBF2_MA1672.2_JASPAR_rc_shift10 (GBF2:MA1672.2:JASPAR_rc)	0.926	0.595	1.013	0.938	0.966	69	367	849	86	70	288.200		; assembly_6 versus GBF2_MA1672.2_JASPAR_rc (GBF2:MA1672.2:JASPAR_rc); m=105/266; ncol2=15; w=0; offset=1; strand=R; shift=10; score= 288.2; ----------TGCCACGTs---- ; cor=0.926; Ncor=0.595; logoDP=1.013; NsEucl=0.938; NSW=0.966; rcor=69; rNcor=367; rlogoDP=849; rNsEucl=86; rNSW=70; rank_mean=288.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 877 359 1408 112 7491 221 356 197 954 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 891 282 6028 7553 77 7275 221 145 3420 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 596 6254 153 83 127 107 7122 101 2988 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 5558 1027 333 174 227 319 223 7479 560 0 0 0 0
bHLH18_MA1361.2_JASPAR_shift4 (bHLH18:MA1361.2:JASPAR)	0.885	0.466	6.430	0.930	0.950	145	838	202	129	130	288.800		; assembly_6 versus bHLH18_MA1361.2_JASPAR (bHLH18:MA1361.2:JASPAR); m=106/266; ncol2=10; w=-5; offset=-5; strand=D; shift=4; score= 288.8; ----crYGtkwwhC--------- ; cor=0.885; Ncor=0.466; logoDP=6.430; NsEucl=0.930; NSW=0.950; rcor=145; rNcor=838; rlogoDP=202; rNsEucl=129; rNSW=130; rank_mean=288.800; match_rank= a 0 0 0 0 34 109 0 38 28 12 60 55 61 11 0 0 0 0 0 0 0 0 0 c 0 0 0 0 128 2 143 4 32 13 15 27 61 190 0 0 0 0 0 0 0 0 0 g 0 0 0 0 20 58 7 153 8 116 29 31 15 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 19 32 51 6 133 60 97 88 64 0 0 0 0 0 0 0 0 0 0
bZIP16_MA1349.1_JASPAR_rc_shift10 (bZIP16:MA1349.1:JASPAR_rc)	0.865	0.703	1.006	0.933	0.942	210	105	853	109	170	289.400		; assembly_6 versus bZIP16_MA1349.1_JASPAR_rc (bZIP16:MA1349.1:JASPAR_rc); m=107/266; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 289.4; ----------TGCCACGTsrs-- ; cor=0.865; Ncor=0.703; logoDP=1.006; NsEucl=0.933; NSW=0.942; rcor=210; rNcor=105; rlogoDP=853; rNsEucl=109; rNSW=170; rank_mean=289.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 14 0 65 0 594 0 1 0 27 279 69 0 0 c 0 0 0 0 0 0 0 0 0 0 94 0 529 594 0 587 7 0 265 0 254 0 0 g 0 0 0 0 0 0 0 0 0 0 22 561 0 0 0 7 586 0 302 170 174 0 0 t 0 0 0 0 0 0 0 0 0 0 464 33 0 0 0 0 0 594 0 145 97 0 0
bZIP2_1_EEAD0096_EEADannot_rc_shift10 (bZIP2_1:EEAD0096:EEADannot_rc)	0.860	0.699	0.951	0.935	0.945	222	108	866	103	156	291.000		; assembly_6 versus bZIP2_1_EEAD0096_EEADannot_rc (bZIP2_1:EEAD0096:EEADannot_rc); m=108/266; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 291; ----------TGCCACGTsw--- ; cor=0.860; Ncor=0.699; logoDP=0.951; NsEucl=0.935; NSW=0.945; rcor=222; rNcor=108; rlogoDP=866; rNsEucl=103; rNSW=156; rank_mean=291.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 68 3 233 0 999 2 2 0 69 481 0 0 0 c 0 0 0 0 0 0 0 0 0 0 179 0 767 1000 0 991 0 0 456 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 64 871 0 0 0 6 998 0 475 235 0 0 0 t 0 0 0 0 0 0 0 0 0 0 689 126 0 0 1 1 0 1000 0 284 0 0 0
LEC1-A_UN0422.1_JASPAR_rc_shift8 (LEC1-A:UN0422.1:JASPAR_rc)	0.901	0.600	1.168	0.937	0.961	112	350	825	89	84	292.000		; assembly_6 versus LEC1-A_UN0422.1_JASPAR_rc (LEC1-A:UN0422.1:JASPAR_rc); m=109/266; ncol2=14; w=-1; offset=-1; strand=R; shift=8; score= 292; --------wrTGCCACGtg---- ; cor=0.901; Ncor=0.600; logoDP=1.168; NsEucl=0.937; NSW=0.961; rcor=112; rNcor=350; rlogoDP=825; rNsEucl=89; rNSW=84; rank_mean=292.000; match_rank= a 0 0 0 0 0 0 0 0 4538 4440 1326 346 2159 502 15482 569 706 2477 3467 0 0 0 0 c 0 0 0 0 0 0 0 0 3775 3848 1497 672 12672 15073 174 15158 501 2775 2759 0 0 0 0 g 0 0 0 0 0 0 0 0 3805 4154 887 14415 820 401 435 207 14394 1783 7023 0 0 0 0 t 0 0 0 0 0 0 0 0 4425 4101 12833 1110 892 567 452 609 942 9508 3294 0 0 0 0
At3g59060_MA0562.1_JASPAR_rc_shift12 (At3g59060:MA0562.1:JASPAR_rc)	0.890	0.508	7.051	0.913	0.939	134	690	140	331	194	297.800		; assembly_6 versus At3g59060_MA0562.1_JASPAR_rc (At3g59060:MA0562.1:JASPAR_rc); m=110/266; ncol2=11; w=0; offset=3; strand=R; shift=12; score= 297.8; ------------sCAYGTGR--- ; cor=0.890; Ncor=0.508; logoDP=7.051; NsEucl=0.913; NSW=0.939; rcor=134; rNcor=690; rlogoDP=140; rNsEucl=331; rNSW=194; rank_mean=297.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 30 0 286 0 0 0 0 208 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 161 286 0 195 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0 286 0 286 78 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 91 0 286 0 0 0 0 0
BZIP92_Mo17_1_EEAD0312_EEADannot_shift11 (BZIP92_Mo17_1:EEAD0312:EEADannot)	0.823	0.647	7.168	0.913	0.917	376	198	130	332	456	298.400		; assembly_6 versus BZIP92_Mo17_1_EEAD0312_EEADannot (BZIP92_Mo17_1:EEAD0312:EEADannot); m=111/266; ncol2=6; w=0; offset=2; strand=D; shift=11; score= 298.4; -----------GCCACG------ ; cor=0.823; Ncor=0.647; logoDP=7.168; NsEucl=0.913; NSW=0.917; rcor=376; rNcor=198; rlogoDP=130; rNsEucl=332; rNSW=456; rank_mean=298.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 22 0 100 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 78 100 0 99 2 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 94 0 0 0 0 98 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 1 0 0 0 0 0 0 0
BHLH168_ZmSPT2_Mo17_1_EEAD0221_EEADannot_rc_shift10 (BHLH168_ZmSPT2_Mo17_1:EEAD0221:EEADannot_rc)	0.869	0.683	1.886	0.923	0.935	192	130	758	187	243	302.000		; assembly_6 versus BHLH168_ZmSPT2_Mo17_1_EEAD0221_EEADannot_rc (BHLH168_ZmSPT2_Mo17_1:EEAD0221:EEADannot_rc); m=112/266; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 302; ----------gCCCACGTGg--- ; cor=0.869; Ncor=0.683; logoDP=1.886; NsEucl=0.923; NSW=0.935; rcor=192; rNcor=130; rlogoDP=758; rNsEucl=187; rNSW=243; rank_mean=302.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 21 4 1 0 100 0 5 0 0 11 0 0 0 c 0 0 0 0 0 0 0 0 0 0 14 79 96 100 0 99 0 1 0 20 0 0 0 g 0 0 0 0 0 0 0 0 0 0 57 9 3 0 0 0 95 0 100 55 0 0 0 t 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 1 0 99 0 14 0 0 0
UNE10_MA1074.2_JASPAR_shift13 (UNE10:MA1074.2:JASPAR)	0.915	0.457	7.554	0.912	0.946	87	859	84	342	143	303.000		; assembly_6 versus UNE10_MA1074.2_JASPAR (UNE10:MA1074.2:JASPAR); m=113/266; ncol2=7; w=0; offset=4; strand=D; shift=13; score= 303; -------------CACGTGm--- ; cor=0.915; Ncor=0.457; logoDP=7.554; NsEucl=0.912; NSW=0.946; rcor=87; rNcor=859; rlogoDP=84; rNsEucl=342; rNSW=143; rank_mean=303.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 999 0 0 0 0 267 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 999 0 999 0 0 0 533 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 999 0 999 67 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 999 0 134 0 0 0
HYH_MA1425.1_JASPAR_rc_shift10 (HYH:MA1425.1:JASPAR_rc)	0.790	0.677	5.793	0.920	0.924	551	136	253	220	369	305.800		; assembly_6 versus HYH_MA1425.1_JASPAR_rc (HYH:MA1425.1:JASPAR_rc); m=114/266; ncol2=15; w=0; offset=1; strand=R; shift=10; score= 305.8; ----------tgmCACGTswyc- ; cor=0.790; Ncor=0.677; logoDP=5.793; NsEucl=0.920; NSW=0.924; rcor=551; rNcor=136; rlogoDP=253; rNsEucl=220; rNSW=369; rank_mean=305.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 226 177 306 48 999 0 0 0 102 571 152 201 0 c 0 0 0 0 0 0 0 0 0 0 226 177 392 747 0 999 0 0 523 72 321 396 0 g 0 0 0 0 0 0 0 0 0 0 226 466 97 154 0 0 999 0 350 72 152 201 0 t 0 0 0 0 0 0 0 0 0 0 321 177 203 48 0 0 0 999 23 283 372 201 0
ABI5.DAP_M0201_AthalianaCistrome_rc_shift8 (ABI5.DAP:M0201:AthalianaCistrome_rc)	0.843	0.656	1.922	0.934	0.939	287	179	755	108	201	306.000		; assembly_6 versus ABI5.DAP_M0201_AthalianaCistrome_rc (ABI5.DAP:M0201:AthalianaCistrome_rc); m=115/266; ncol2=7; w=-1; offset=-1; strand=R; shift=8; score= 306; --------wytGMCA-------- ; cor=0.843; Ncor=0.656; logoDP=1.922; NsEucl=0.934; NSW=0.939; rcor=287; rNcor=179; rlogoDP=755; rNsEucl=108; rNSW=201; rank_mean=306.000; match_rank= a 0 0 0 0 0 0 0 0 201 146 28 0 149 0 595 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 87 174 123 0 446 595 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 117 124 50 568 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 190 151 394 27 0 0 0 0 0 0 0 0 0 0 0
bZIP2_2_EEAD0097_EEADannot_rc_shift13 (bZIP2_2:EEAD0097:EEADannot_rc)	0.926	0.529	2.862	0.930	0.961	71	603	663	124	82	308.600		; assembly_6 versus bZIP2_2_EEAD0097_EEADannot_rc (bZIP2_2:EEAD0097:EEADannot_rc); m=116/266; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 308.6; -------------sACGTGkm-- ; cor=0.926; Ncor=0.529; logoDP=2.862; NsEucl=0.930; NSW=0.961; rcor=71; rNcor=603; rlogoDP=663; rNsEucl=124; rNSW=82; rank_mean=308.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 338 0 0 0 0 0 174 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 176 0 338 0 0 0 0 110 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 338 0 338 210 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 67 0 0 0 338 0 128 54 0 0
GT3a_MA1207.1_JASPAR_shift11 (GT3a:MA1207.1:JASPAR)	0.829	0.524	6.665	0.926	0.935	350	626	184	150	244	310.800		; assembly_6 versus GT3a_MA1207.1_JASPAR (GT3a:MA1207.1:JASPAR); m=118/266; ncol2=8; w=0; offset=2; strand=D; shift=11; score= 310.8; -----------rrCACGTG---- ; cor=0.829; Ncor=0.524; logoDP=6.665; NsEucl=0.926; NSW=0.935; rcor=350; rNcor=626; rlogoDP=184; rNsEucl=150; rNSW=244; rank_mean=310.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 145 155 11 371 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 72 69 360 0 328 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 96 98 0 0 0 371 0 324 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 58 49 0 0 43 0 371 47 0 0 0 0
HY5_HY5_Athamap_rc_shift9 (HY5:HY5:Athamap_rc)	0.905	0.711	1.184	0.919	0.928	103	86	824	241	316	314.000		; assembly_6 versus HY5_HY5_Athamap_rc (HY5:HY5:Athamap_rc); m=119/266; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 314; ---------ATGmCACGTGG--- ; cor=0.905; Ncor=0.711; logoDP=1.184; NsEucl=0.919; NSW=0.928; rcor=103; rNcor=86; rlogoDP=824; rNsEucl=241; rNSW=316; rank_mean=314.000; match_rank= a 0 0 0 0 0 0 0 0 0 2 0 0 1 0 2 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 2 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 2 0 2 2 0 0 0 t 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 2 0 0 0 0 0
BHLH106_ZmBIM2_B73_1_m1_EEAD0207_EEADannot_shift7 (BHLH106_ZmBIM2_B73_1_m1:EEAD0207:EEADannot)	0.781	0.635	7.222	0.922	0.920	607	227	122	204	423	316.600		; assembly_6 versus BHLH106_ZmBIM2_B73_1_m1_EEAD0207_EEADannot (BHLH106_ZmBIM2_B73_1_m1:EEAD0207:EEADannot); m=120/266; ncol2=7; w=-2; offset=-2; strand=D; shift=7; score= 316.6; -------gssrcgC--------- ; cor=0.781; Ncor=0.635; logoDP=7.222; NsEucl=0.922; NSW=0.920; rcor=607; rNcor=227; rlogoDP=122; rNsEucl=204; rNSW=423; rank_mean=316.600; match_rank= a 0 0 0 0 0 0 0 14 15 18 32 18 10 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 21 36 36 24 35 14 100 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 56 26 29 31 23 55 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 9 23 17 13 24 21 0 0 0 0 0 0 0 0 0 0
NAC072_UN0821.1_JASPAR_rc_shift11 (NAC072:UN0821.1:JASPAR_rc)	0.847	0.605	4.815	0.916	0.930	274	327	420	270	296	317.400		; assembly_6 versus NAC072_UN0821.1_JASPAR_rc (NAC072:UN0821.1:JASPAR_rc); m=121/266; ncol2=6; w=0; offset=2; strand=R; shift=11; score= 317.4; -----------GACACG------ ; cor=0.847; Ncor=0.605; logoDP=4.815; NsEucl=0.916; NSW=0.930; rcor=274; rNcor=327; rlogoDP=420; rNsEucl=270; rNSW=296; rank_mean=317.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 308 2303 199 2726 141 150 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 250 282 2359 46 2552 64 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 2012 85 209 64 64 2552 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 337 237 140 71 150 141 0 0 0 0 0 0
BZIP86_Mo17_2_EEAD0304_EEADannot_shift11 (BZIP86_Mo17_2:EEAD0304:EEADannot)	0.814	0.639	5.714	0.916	0.922	432	216	266	284	394	318.400		; assembly_6 versus BZIP86_Mo17_2_EEAD0304_EEADannot (BZIP86_Mo17_2:EEAD0304:EEADannot); m=122/266; ncol2=7; w=0; offset=2; strand=D; shift=11; score= 318.4; -----------GCCACGT----- ; cor=0.814; Ncor=0.639; logoDP=5.714; NsEucl=0.916; NSW=0.922; rcor=432; rNcor=216; rlogoDP=266; rNsEucl=284; rNSW=394; rank_mean=318.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 2 23 0 96 1 8 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 5 76 100 2 89 9 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 78 1 0 1 4 82 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 15 0 0 1 6 1 100 0 0 0 0 0
PHYPADRAFT_143875_MA0988.1_JASPAR_shift11 (PHYPADRAFT_143875:MA0988.1:JASPAR)	0.838	0.599	5.059	0.917	0.931	312	356	378	264	283	318.600		; assembly_6 versus PHYPADRAFT_143875_MA0988.1_JASPAR (PHYPADRAFT_143875:MA0988.1:JASPAR); m=123/266; ncol2=12; w=0; offset=2; strand=D; shift=11; score= 318.6; -----------hgCACGTGcd-- ; cor=0.838; Ncor=0.599; logoDP=5.059; NsEucl=0.917; NSW=0.931; rcor=312; rNcor=356; rlogoDP=378; rNsEucl=264; rNSW=283; rank_mean=318.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 250 208 106 923 22 39 66 38 169 256 0 0 c 0 0 0 0 0 0 0 0 0 0 0 272 231 844 0 940 0 10 12 392 222 0 0 g 0 0 0 0 0 0 0 0 0 0 0 222 392 12 10 0 940 0 844 231 272 0 0 t 0 0 0 0 0 0 0 0 0 0 0 256 169 38 66 39 22 923 106 208 250 0 0
PIF1_MA0552.1_JASPAR_rc_shift12 (PIF1:MA0552.1:JASPAR_rc)	0.915	0.592	0.294	0.943	0.965	86	375	1003	62	74	320.000		; assembly_6 versus PIF1_MA0552.1_JASPAR_rc (PIF1:MA0552.1:JASPAR_rc); m=124/266; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 320; ------------cCACGTGwcc- ; cor=0.915; Ncor=0.592; logoDP=0.294; NsEucl=0.943; NSW=0.965; rcor=86; rNcor=375; rlogoDP=1003; rNsEucl=62; rNSW=74; rank_mean=320.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 18 0 112 0 0 0 0 48 15 28 0 c 0 0 0 0 0 0 0 0 0 0 0 0 51 114 0 114 1 0 11 14 73 32 0 g 0 0 0 0 0 0 0 0 0 0 0 0 23 0 2 0 113 0 103 14 17 27 0 t 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 114 0 38 9 27 0
BZIP68_ZmABF2_Mo17_1_EEAD0293_EEADannot_shift11 (BZIP68_ZmABF2_Mo17_1:EEAD0293:EEADannot)	0.816	0.641	6.728	0.913	0.916	419	212	179	335	464	321.800		; assembly_6 versus BZIP68_ZmABF2_Mo17_1_EEAD0293_EEADannot (BZIP68_ZmABF2_Mo17_1:EEAD0293:EEADannot); m=125/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 321.8; -----------GCCACGTswb-- ; cor=0.816; Ncor=0.641; logoDP=6.728; NsEucl=0.913; NSW=0.916; rcor=419; rNcor=212; rlogoDP=179; rNsEucl=335; rNSW=464; rank_mean=321.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 1 20 0 100 0 4 0 4 56 9 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 80 100 0 99 10 0 58 1 37 0 0 g 0 0 0 0 0 0 0 0 0 0 0 92 0 0 0 0 86 0 38 18 25 0 0 t 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 1 0 100 0 25 29 0 0
BEE2_MA0956.2_JASPAR_shift13 (BEE2:MA0956.2:JASPAR)	0.988	0.424	3.667	0.957	0.989	13	989	561	29	19	322.200		; assembly_6 versus BEE2_MA0956.2_JASPAR (BEE2:MA0956.2:JASPAR); m=126/266; ncol2=10; w=0; offset=4; strand=D; shift=13; score= 322.2; -------------CACGTG---- ; cor=0.988; Ncor=0.424; logoDP=3.667; NsEucl=0.957; NSW=0.989; rcor=13; rNcor=989; rlogoDP=561; rNsEucl=29; rNSW=19; rank_mean=322.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 136 893 23 157 74 104 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 722 0 820 0 33 38 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 38 33 0 820 0 722 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 104 74 157 23 893 136 0 0 0 0
e_gw1.209.40.1_M0250_1.02_CISBP_shift11 (e_gw1.209.40.1:M0250_1.02:CISBP)	0.837	0.598	5.024	0.917	0.931	317	359	386	267	289	323.600		; assembly_6 versus e_gw1.209.40.1_M0250_1.02_CISBP (e_gw1.209.40.1:M0250_1.02:CISBP); m=127/266; ncol2=8; w=0; offset=2; strand=D; shift=11; score= 323.6; -----------hgCACGTG---- ; cor=0.837; Ncor=0.598; logoDP=5.024; NsEucl=0.917; NSW=0.931; rcor=317; rNcor=359; rlogoDP=386; rNsEucl=267; rNSW=289; rank_mean=323.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 25 21 11 92 2 4 7 4 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 27 23 84 0 94 0 1 1 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 22 39 1 1 0 94 0 84 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 26 17 4 7 4 2 92 11 0 0 0 0
ABF2_MA0941.2_JASPAR_shift12 (ABF2:MA0941.2:JASPAR)	0.915	0.457	5.283	0.920	0.955	85	858	338	231	107	323.800		; assembly_6 versus ABF2_MA0941.2_JASPAR (ABF2:MA0941.2:JASPAR); m=128/266; ncol2=10; w=0; offset=3; strand=D; shift=12; score= 323.8; ------------ACACGTg---- ; cor=0.915; Ncor=0.457; logoDP=5.283; NsEucl=0.920; NSW=0.955; rcor=85; rNcor=858; rlogoDP=338; rNsEucl=231; rNSW=107; rank_mean=323.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 699 0 999 0 19 19 218 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 177 840 0 917 19 19 59 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 103 0 0 0 942 19 664 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 21 159 0 82 19 942 59 0 0 0 0
BHLH91_MYC2B_Mo17_1_EEAD0235_EEADannot_shift4 (BHLH91_MYC2B_Mo17_1:EEAD0235:EEADannot)	0.866	0.456	5.621	0.927	0.947	199	869	273	140	139	324.000		; assembly_6 versus BHLH91_MYC2B_Mo17_1_EEAD0235_EEADannot (BHLH91_MYC2B_Mo17_1:EEAD0235:EEADannot); m=129/266; ncol2=10; w=-5; offset=-5; strand=D; shift=4; score= 324; ----cayrwkwaaC--------- ; cor=0.866; Ncor=0.456; logoDP=5.621; NsEucl=0.927; NSW=0.947; rcor=199; rNcor=869; rlogoDP=273; rNsEucl=140; rNSW=139; rank_mean=324.000; match_rank= a 0 0 0 0 22 52 17 42 27 17 26 50 47 16 0 0 0 0 0 0 0 0 0 c 0 0 0 0 50 14 45 4 8 7 11 12 21 84 0 0 0 0 0 0 0 0 0 g 0 0 0 0 13 18 5 37 4 29 17 14 17 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 15 16 33 17 61 47 46 24 15 0 0 0 0 0 0 0 0 0 0
PIF3_MA0560.2_JASPAR_rc_shift13 (PIF3:MA0560.2:JASPAR_rc)	0.985	0.493	1.076	0.960	0.989	17	743	838	26	18	328.400		; assembly_6 versus PIF3_MA0560.2_JASPAR_rc (PIF3:MA0560.2:JASPAR_rc); m=130/266; ncol2=10; w=0; offset=4; strand=R; shift=13; score= 328.4; -------------CACGTGG--- ; cor=0.985; Ncor=0.493; logoDP=1.076; NsEucl=0.960; NSW=0.989; rcor=17; rNcor=743; rlogoDP=838; rNsEucl=26; rNSW=18; rank_mean=328.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 527 0 118 0 0 15 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 527 0 527 0 0 0 94 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 409 0 527 399 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 527 0 19 0 0 0
NFYC2_UN0690.2_JASPAR_rc_shift10 (NFYC2:UN0690.2:JASPAR_rc)	0.959	0.548	0.303	0.949	0.980	37	541	1000	37	32	329.400		; assembly_6 versus NFYC2_UN0690.2_JASPAR_rc (NFYC2:UN0690.2:JASPAR_rc); m=131/266; ncol2=7; w=0; offset=1; strand=R; shift=10; score= 329.4; ----------TGCCACG------ ; cor=0.959; Ncor=0.548; logoDP=0.303; NsEucl=0.949; NSW=0.980; rcor=37; rNcor=541; rlogoDP=1000; rNsEucl=37; rNSW=32; rank_mean=329.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 431 110 903 86 4473 105 160 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 508 174 3438 4421 23 4428 87 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 184 4053 103 53 105 31 4264 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 3557 343 236 120 79 116 169 0 0 0 0 0 0
ABI5_ABI5_Athamap_shift11 (ABI5:ABI5:Athamap)	0.856	0.550	6.280	0.911	0.929	239	536	213	357	306	330.200		; assembly_6 versus ABI5_ABI5_Athamap (ABI5:ABI5:Athamap); m=132/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 330.2; -----------KMyACGTbR--- ; cor=0.856; Ncor=0.550; logoDP=6.280; NsEucl=0.911; NSW=0.929; rcor=239; rNcor=536; rlogoDP=213; rNsEucl=357; rNSW=306; rank_mean=330.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 3 0 4 0 0 0 0 1 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 4 0 0 1 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 4 0 2 3 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 4 1 0 0 0 0
GBF3_MA1351.3_JASPAR_rc_shift10 (GBF3:MA1351.3:JASPAR_rc)	0.960	0.549	0.287	0.949	0.979	36	540	1009	39	34	331.600		; assembly_6 versus GBF3_MA1351.3_JASPAR_rc (GBF3:MA1351.3:JASPAR_rc); m=133/266; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 331.6; ----------TGCCACGT----- ; cor=0.960; Ncor=0.549; logoDP=0.287; NsEucl=0.949; NSW=0.979; rcor=36; rNcor=540; rlogoDP=1009; rNsEucl=39; rNSW=34; rank_mean=331.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 801 228 1454 131 9185 232 512 860 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 831 275 7410 9137 27 8749 340 636 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 400 8130 212 60 113 139 8349 509 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 7429 828 385 133 136 341 260 7456 0 0 0 0 0
bHLH77_MA1362.1_JASPAR_shift6 (bHLH77:MA1362.1:JASPAR)	0.807	0.569	7.263	0.920	0.923	470	468	114	225	381	331.600		; assembly_6 versus bHLH77_MA1362.1_JASPAR (bHLH77:MA1362.1:JASPAR); m=134/266; ncol2=7; w=-3; offset=-3; strand=D; shift=6; score= 331.6; ------rwkwdgb---------- ; cor=0.807; Ncor=0.569; logoDP=7.263; NsEucl=0.920; NSW=0.923; rcor=470; rNcor=468; rlogoDP=114; rNsEucl=225; rNSW=381; rank_mean=331.600; match_rank= a 0 0 0 0 0 0 21 28 16 31 21 13 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 12 13 2 4 13 7 23 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 35 12 32 10 22 40 22 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 7 22 25 30 19 15 30 0 0 0 0 0 0 0 0 0 0
POC1_M0151_1.02_CISBP_shift13 (POC1:M0151_1.02:CISBP)	0.924	0.462	4.259	0.924	0.960	73	845	481	171	90	332.000		; assembly_6 versus POC1_M0151_1.02_CISBP (POC1:M0151_1.02:CISBP); m=135/266; ncol2=12; w=0; offset=4; strand=D; shift=13; score= 332; -------------cAYGTGs--- ; cor=0.924; Ncor=0.462; logoDP=4.259; NsEucl=0.924; NSW=0.960; rcor=73; rNcor=845; rlogoDP=481; rNsEucl=171; rNSW=90; rank_mean=332.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 18 73 0 0 0 1 22 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 55 0 71 0 1 1 30 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 14 17 0 88 0 98 35 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 13 10 29 12 99 0 13 0 0 0
ACGT_EEAD0085_EEADannot_shift13 (ACGT:EEAD0085:EEADannot)	0.938	0.402	5.536	0.923	0.965	53	1076	287	183	75	334.800		; assembly_6 versus ACGT_EEAD0085_EEADannot (ACGT:EEAD0085:EEADannot); m=136/266; ncol2=9; w=0; offset=4; strand=D; shift=13; score= 334.8; -------------cACGTs---- ; cor=0.938; Ncor=0.402; logoDP=5.536; NsEucl=0.923; NSW=0.965; rcor=53; rNcor=1076; rlogoDP=287; rNsEucl=183; rNSW=75; rank_mean=334.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 2 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 10 0 0 3 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 10 0 5 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 10 0 0 0 0 0
PHYPA_008731_MA2393.1_JASPAR_shift13 (PHYPA_008731:MA2393.1:JASPAR)	0.907	0.454	7.349	0.909	0.942	102	879	106	414	177	335.600		; assembly_6 versus PHYPA_008731_MA2393.1_JASPAR (PHYPA_008731:MA2393.1:JASPAR); m=137/266; ncol2=8; w=0; offset=4; strand=D; shift=13; score= 335.6; -------------CACGTGc--- ; cor=0.907; Ncor=0.454; logoDP=7.349; NsEucl=0.909; NSW=0.942; rcor=102; rNcor=879; rlogoDP=106; rNsEucl=414; rNSW=177; rank_mean=335.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 998 0 53 0 0 143 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 998 0 998 0 0 0 641 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 945 0 998 71 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 998 0 143 0 0 0
AT2G18300_M0155_1.02_CISBP_shift9 (AT2G18300:M0155_1.02:CISBP)	0.782	0.670	6.576	0.916	0.916	605	149	190	273	463	336.000		; assembly_6 versus AT2G18300_M0155_1.02_CISBP (AT2G18300:M0155_1.02:CISBP); m=138/266; ncol2=10; w=0; offset=0; strand=D; shift=9; score= 336; ---------cgkGCACGTG---- ; cor=0.782; Ncor=0.670; logoDP=6.576; NsEucl=0.916; NSW=0.916; rcor=605; rNcor=149; rlogoDP=190; rNsEucl=273; rNSW=463; rank_mean=336.000; match_rank= a 0 0 0 0 0 0 0 0 0 23 23 13 2 0 100 0 0 2 2 0 0 0 0 c 0 0 0 0 0 0 0 0 0 31 23 24 11 100 0 90 0 2 2 0 0 0 0 g 0 0 0 0 0 0 0 0 0 23 31 32 76 0 0 0 100 2 94 0 0 0 0 t 0 0 0 0 0 0 0 0 0 23 23 31 11 0 0 10 0 94 2 0 0 0 0
BZR2_MA0549.2_JASPAR_rc_shift10 (BZR2:MA0549.2:JASPAR_rc)	0.859	0.614	2.584	0.920	0.936	225	293	707	229	228	336.400		; assembly_6 versus BZR2_MA0549.2_JASPAR_rc (BZR2:MA0549.2:JASPAR_rc); m=139/266; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 336.4; ----------bsmCACGT----- ; cor=0.859; Ncor=0.614; logoDP=2.584; NsEucl=0.920; NSW=0.936; rcor=225; rNcor=293; rlogoDP=707; rNsEucl=229; rNSW=228; rank_mean=336.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 1 3 42 0 99 0 0 6 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 33 46 36 96 0 99 0 4 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 29 33 5 0 0 0 99 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 36 17 16 3 0 0 0 89 0 0 0 0 0
ILR3_M0167_1.02_CISBP_shift11 (ILR3:M0167_1.02:CISBP)	0.855	0.611	2.921	0.918	0.933	240	304	654	249	256	340.600		; assembly_6 versus ILR3_M0167_1.02_CISBP (ILR3:M0167_1.02:CISBP); m=140/266; ncol2=14; w=0; offset=2; strand=D; shift=11; score= 340.6; -----------rrCACGTGyy-- ; cor=0.855; Ncor=0.611; logoDP=2.921; NsEucl=0.918; NSW=0.933; rcor=240; rNcor=304; rlogoDP=654; rNsEucl=249; rNSW=256; rank_mean=340.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 26 27 12 68 0 14 11 6 17 24 0 0 c 0 0 0 0 0 0 0 0 0 0 0 20 23 80 8 86 0 13 2 33 31 0 0 g 0 0 0 0 0 0 0 0 0 0 0 30 33 2 13 0 86 8 79 23 20 0 0 t 0 0 0 0 0 0 0 0 0 0 0 24 17 6 11 14 0 68 13 27 25 0 0
BIM2_MA0965.1_JASPAR_shift11 (BIM2:MA0965.1:JASPAR)	0.827	0.591	5.388	0.914	0.926	359	385	311	311	339	341.000		; assembly_6 versus BIM2_MA0965.1_JASPAR (BIM2:MA0965.1:JASPAR); m=141/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 341; -----------skCACGTGms-- ; cor=0.827; Ncor=0.591; logoDP=5.388; NsEucl=0.914; NSW=0.926; rcor=359; rNcor=385; rlogoDP=311; rNsEucl=311; rNSW=339; rank_mean=341.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 244 167 53 962 22 92 14 49 317 205 0 0 c 0 0 0 0 0 0 0 0 0 0 0 261 143 897 0 885 0 24 1 373 290 0 0 g 0 0 0 0 0 0 0 0 0 0 0 290 373 1 24 0 885 0 897 143 261 0 0 t 0 0 0 0 0 0 0 0 0 0 0 205 317 49 14 92 22 962 53 167 244 0 0
bHLH34_M0157_1.02_CISBP_rc_shift12 (bHLH34:M0157_1.02:CISBP_rc)	0.875	0.500	6.210	0.910	0.936	171	713	217	378	227	341.200		; assembly_6 versus bHLH34_M0157_1.02_CISBP_rc (bHLH34:M0157_1.02:CISBP_rc); m=142/266; ncol2=6; w=0; offset=3; strand=R; shift=12; score= 341.2; ------------mCACGT----- ; cor=0.875; Ncor=0.500; logoDP=6.210; NsEucl=0.910; NSW=0.936; rcor=171; rNcor=713; rlogoDP=217; rNsEucl=378; rNSW=227; rank_mean=341.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 29 0 100 0 15 3 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 48 100 0 100 0 24 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 85 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 73 0 0 0 0 0
BIM1_MA0964.1_JASPAR_shift12 (BIM1:MA0964.1:JASPAR)	0.839	0.599	3.689	0.919	0.935	311	354	558	240	246	341.800		; assembly_6 versus BIM1_MA0964.1_JASPAR (BIM1:MA0964.1:JASPAR); m=143/266; ncol2=20; w=0; offset=3; strand=D; shift=12; score= 341.8; ------------bcaCGTGmyv- ; cor=0.839; Ncor=0.599; logoDP=3.689; NsEucl=0.919; NSW=0.935; rcor=311; rNcor=354; rlogoDP=558; rNsEucl=240; rNSW=246; rank_mean=341.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 219 126 582 59 140 1 3 375 147 257 0 c 0 0 0 0 0 0 0 0 0 0 0 0 250 655 101 766 62 23 2 301 344 262 0 g 0 0 0 0 0 0 0 0 0 0 0 0 281 101 184 23 795 0 990 148 242 257 0 t 0 0 0 0 0 0 0 0 0 0 0 0 250 118 132 152 3 976 6 176 268 225 0
fgenesh1_pg.scaffold_37000071_M0251_1.02_CISBP_shift11 (fgenesh1_pg.scaffold_37000071:M0251_1.02:CISBP)	0.844	0.603	3.538	0.917	0.932	283	335	576	256	263	342.600		; assembly_6 versus fgenesh1_pg.scaffold_37000071_M0251_1.02_CISBP (fgenesh1_pg.scaffold_37000071:M0251_1.02:CISBP); m=144/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 342.6; -----------rkCACGTGmy-- ; cor=0.844; Ncor=0.603; logoDP=3.538; NsEucl=0.917; NSW=0.932; rcor=283; rNcor=335; rlogoDP=576; rNsEucl=256; rNSW=263; rank_mean=342.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 26 21 7 81 5 15 8 6 34 19 0 0 c 0 0 0 0 0 0 0 0 0 0 0 24 18 85 0 80 0 11 2 27 31 0 0 g 0 0 0 0 0 0 0 0 0 0 0 31 27 2 10 0 80 0 85 18 24 0 0 t 0 0 0 0 0 0 0 0 0 0 0 19 34 6 9 15 5 81 7 21 26 0 0
BIM2_M0154_1.02_CISBP_shift11 (BIM2:M0154_1.02:CISBP)	0.826	0.590	5.383	0.914	0.926	360	387	314	313	342	343.200		; assembly_6 versus BIM2_M0154_1.02_CISBP (BIM2:M0154_1.02:CISBP); m=145/266; ncol2=9; w=0; offset=2; strand=D; shift=11; score= 343.2; -----------skCACGTGm--- ; cor=0.826; Ncor=0.590; logoDP=5.383; NsEucl=0.914; NSW=0.926; rcor=360; rNcor=387; rlogoDP=314; rNsEucl=313; rNSW=342; rank_mean=343.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 24 17 5 96 2 9 1 5 32 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 26 14 90 1 89 0 2 0 37 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 29 37 0 2 0 89 1 90 14 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 21 32 5 1 9 2 96 5 17 0 0 0
OsbZIP43_UN0825.1_JASPAR_rc_shift12 (OsbZIP43:UN0825.1:JASPAR_rc)	0.986	0.493	0.556	0.965	0.991	16	738	933	17	14	343.600		; assembly_6 versus OsbZIP43_UN0825.1_JASPAR_rc (OsbZIP43:UN0825.1:JASPAR_rc); m=147/266; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 343.6; ------------cCACGTG---- ; cor=0.986; Ncor=0.493; logoDP=0.556; NsEucl=0.965; NSW=0.991; rcor=16; rNcor=738; rlogoDP=933; rNsEucl=17; rNSW=14; rank_mean=343.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 200 0 999 0 0 0 25 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 642 927 0 999 0 0 222 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 42 72 0 0 999 0 726 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 114 0 0 0 0 999 25 0 0 0 0
PHYPADRAFT_72483_MA1011.1_JASPAR_shift11 (PHYPADRAFT_72483:MA1011.1:JASPAR)	0.844	0.603	3.515	0.917	0.932	284	336	578	257	265	344.000		; assembly_6 versus PHYPADRAFT_72483_MA1011.1_JASPAR (PHYPADRAFT_72483:MA1011.1:JASPAR); m=148/266; ncol2=8; w=0; offset=2; strand=D; shift=11; score= 344; -----------rkCACGTG---- ; cor=0.844; Ncor=0.603; logoDP=3.515; NsEucl=0.917; NSW=0.932; rcor=284; rNcor=336; rlogoDP=578; rNsEucl=257; rNSW=265; rank_mean=344.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 264 210 69 806 55 146 87 64 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 238 181 849 0 800 0 106 17 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 308 272 17 106 0 800 0 849 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 190 337 64 87 146 55 806 69 0 0 0 0
ABF1_M0257_1.02_CISBP_rc_shift11 (ABF1:M0257_1.02:CISBP_rc)	0.848	0.666	0.468	0.926	0.940	269	161	949	153	190	344.400		; assembly_6 versus ABF1_M0257_1.02_CISBP_rc (ABF1:M0257_1.02:CISBP_rc); m=149/266; ncol2=8; w=0; offset=2; strand=R; shift=11; score= 344.4; -----------vmCACGTG---- ; cor=0.848; Ncor=0.666; logoDP=0.468; NsEucl=0.926; NSW=0.940; rcor=269; rNcor=161; rlogoDP=949; rNsEucl=153; rNSW=190; rank_mean=344.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 26 25 13 90 0 9 8 9 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 28 40 71 0 82 0 10 1 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 28 19 4 10 0 91 8 74 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 18 16 12 0 18 0 74 16 0 0 0 0
ABF3_MA0930.3_JASPAR_shift14 (ABF3:MA0930.3:JASPAR)	0.915	0.457	4.266	0.922	0.957	88	860	477	202	97	344.800		; assembly_6 versus ABF3_MA0930.3_JASPAR (ABF3:MA0930.3:JASPAR); m=150/266; ncol2=10; w=0; offset=5; strand=D; shift=14; score= 344.8; --------------aCGTGtC-- ; cor=0.915; Ncor=0.457; logoDP=4.266; NsEucl=0.922; NSW=0.957; rcor=88; rNcor=860; rlogoDP=477; rNsEucl=202; rNSW=97; rank_mean=344.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5658 143 51 339 420 781 662 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 606 8374 51 321 296 368 7781 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 908 36 8414 381 7845 1935 60 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1420 39 76 7551 31 5508 89 0 0
HBI1_MA1025.1_JASPAR_shift9 (HBI1:MA1025.1:JASPAR)	0.779	0.667	6.560	0.916	0.915	622	158	192	283	477	346.400		; assembly_6 versus HBI1_MA1025.1_JASPAR (HBI1:MA1025.1:JASPAR); m=151/266; ncol2=10; w=0; offset=0; strand=D; shift=9; score= 346.4; ---------cgkGCACGTG---- ; cor=0.779; Ncor=0.667; logoDP=6.560; NsEucl=0.916; NSW=0.915; rcor=622; rNcor=158; rlogoDP=192; rNsEucl=283; rNSW=477; rank_mean=346.400; match_rank= a 0 0 0 0 0 0 0 0 0 229 229 132 24 0 1000 0 0 21 21 0 0 0 0 c 0 0 0 0 0 0 0 0 0 313 229 240 106 1000 0 904 0 21 21 0 0 0 0 g 0 0 0 0 0 0 0 0 0 229 313 315 762 0 0 0 1000 21 936 0 0 0 0 t 0 0 0 0 0 0 0 0 0 229 229 313 108 0 0 95 0 936 21 0 0 0 0
bZIP68_M0255_1.02_CISBP_shift12 (bZIP68:M0255_1.02:CISBP)	0.885	0.569	2.681	0.919	0.940	143	469	696	243	184	347.000		; assembly_6 versus bZIP68_M0255_1.02_CISBP (bZIP68:M0255_1.02:CISBP); m=152/266; ncol2=8; w=0; offset=3; strand=D; shift=12; score= 347; ------------hsacgTGk--- ; cor=0.885; Ncor=0.569; logoDP=2.681; NsEucl=0.919; NSW=0.940; rcor=143; rNcor=469; rlogoDP=696; rNsEucl=243; rNSW=184; rank_mean=347.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 25 19 62 7 12 3 3 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 34 33 13 65 16 6 0 7 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 12 26 14 15 63 0 95 55 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 29 22 11 13 9 91 2 38 0 0 0
GLYMA-06G314400_MA1808.2_JASPAR_rc_shift10 (GLYMA-06G314400:MA1808.2:JASPAR_rc)	0.944	0.539	0.300	0.942	0.973	47	572	1001	69	47	347.200		; assembly_6 versus GLYMA-06G314400_MA1808.2_JASPAR_rc (GLYMA-06G314400:MA1808.2:JASPAR_rc); m=153/266; ncol2=21; w=0; offset=1; strand=R; shift=10; score= 347.2; ----------TGCCACGt----- ; cor=0.944; Ncor=0.539; logoDP=0.300; NsEucl=0.942; NSW=0.973; rcor=47; rNcor=572; rlogoDP=1001; rNsEucl=69; rNSW=47; rank_mean=347.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 1920 603 4225 666 26663 900 939 3322 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 2120 862 21101 26215 207 25777 1277 3696 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 1356 24505 1261 357 530 411 24345 2293 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 22437 1863 1246 595 433 745 1272 18522 0 0 0 0 0
MYC3_M0165_1.02_CISBP_rc_shift9 (MYC3:M0165_1.02:CISBP_rc)	0.881	0.629	0.265	0.926	0.945	151	248	1029	160	155	348.600		; assembly_6 versus MYC3_M0165_1.02_CISBP_rc (MYC3:M0165_1.02:CISBP_rc); m=154/266; ncol2=7; w=0; offset=0; strand=R; shift=9; score= 348.6; ---------wwvsCAC------- ; cor=0.881; Ncor=0.629; logoDP=0.265; NsEucl=0.926; NSW=0.945; rcor=151; rNcor=248; rlogoDP=1029; rNsEucl=160; rNSW=155; rank_mean=348.600; match_rank= a 0 0 0 0 0 0 0 0 0 27 30 26 23 18 87 8 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 20 24 26 25 73 0 74 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 23 21 25 35 0 12 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 30 25 23 17 9 1 18 0 0 0 0 0 0 0
BHLH34_MA0962.1_JASPAR_shift12 (BHLH34:MA0962.1:JASPAR)	0.873	0.499	6.197	0.910	0.935	176	717	219	391	240	348.600		; assembly_6 versus BHLH34_MA0962.1_JASPAR (BHLH34:MA0962.1:JASPAR); m=155/266; ncol2=10; w=0; offset=3; strand=D; shift=12; score= 348.6; ------------gCACGTGk--- ; cor=0.873; Ncor=0.499; logoDP=6.197; NsEucl=0.910; NSW=0.935; rcor=176; rNcor=717; rlogoDP=219; rNsEucl=391; rNSW=240; rank_mean=348.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 154 0 727 0 0 0 0 96 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 39 999 0 848 0 0 0 143 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 653 0 242 0 999 0 999 476 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 154 0 31 152 0 999 0 286 0 0 0
BAM8_MA2014.1_JASPAR_shift9 (BAM8:MA2014.1:JASPAR)	0.745	0.745	7.027	0.919	0.909	795	50	143	237	532	351.400		; assembly_6 versus BAM8_MA2014.1_JASPAR (BAM8:MA2014.1:JASPAR); m=156/266; ncol2=17; w=0; offset=0; strand=D; shift=9; score= 351.4; ---------ytCACACGTGysaa ; cor=0.745; Ncor=0.745; logoDP=7.027; NsEucl=0.919; NSW=0.909; rcor=795; rNcor=50; rlogoDP=143; rNsEucl=237; rNSW=532; rank_mean=351.400; match_rank= a 0 0 0 0 0 0 0 0 0 420 418 116 1383 6 1846 2 9 9 66 116 320 803 600 c 0 0 0 0 0 0 0 0 0 498 441 1278 101 1856 2 1862 1 31 1 1018 500 222 371 g 0 0 0 0 0 0 0 0 0 325 207 279 273 4 14 1 1863 5 1803 140 863 409 456 t 0 0 0 0 0 0 0 0 0 633 810 203 119 10 14 11 3 1831 6 602 193 442 449
GBF3_M0264_1.02_CISBP_rc_shift10 (GBF3:M0264_1.02:CISBP_rc)	0.856	0.612	1.346	0.921	0.938	236	301	803	213	211	352.800		; assembly_6 versus GBF3_M0264_1.02_CISBP_rc (GBF3:M0264_1.02:CISBP_rc); m=157/266; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 352.8; ----------kkmCAcgTvr--- ; cor=0.856; Ncor=0.612; logoDP=1.346; NsEucl=0.921; NSW=0.938; rcor=236; rNcor=301; rlogoDP=803; rNsEucl=213; rNSW=211; rank_mean=352.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 21 12 40 4 90 9 14 8 30 37 0 0 0 c 0 0 0 0 0 0 0 0 0 0 18 14 54 89 1 66 17 10 33 11 0 0 0 g 0 0 0 0 0 0 0 0 0 0 28 41 6 0 4 18 65 9 27 32 0 0 0 t 0 0 0 0 0 0 0 0 0 0 33 33 0 7 5 7 4 73 10 20 0 0 0
ILR3_MA2397.1_JASPAR_shift13 (ILR3:MA2397.1:JASPAR)	0.976	0.418	2.924	0.941	0.979	26	1007	653	72	33	358.200		; assembly_6 versus ILR3_MA2397.1_JASPAR (ILR3:MA2397.1:JASPAR); m=158/266; ncol2=10; w=0; offset=4; strand=D; shift=13; score= 358.2; -------------CACGTG---- ; cor=0.976; Ncor=0.418; logoDP=2.924; NsEucl=0.941; NSW=0.979; rcor=26; rNcor=1007; rlogoDP=653; rNsEucl=72; rNSW=33; rank_mean=358.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 129 681 2 132 112 55 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 796 84 864 2 120 18 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 18 120 2 864 84 796 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 55 112 132 2 681 129 0 0 0 0
bHLH104.DAP_M0175_AthalianaCistrome_rc_shift1 (bHLH104.DAP:M0175:AthalianaCistrome_rc)	0.929	0.507	0.476	0.952	0.972	64	698	947	35	48	358.400		; assembly_6 versus bHLH104.DAP_M0175_AthalianaCistrome_rc (bHLH104.DAP:M0175:AthalianaCistrome_rc); m=159/266; ncol2=21; w=-8; offset=-8; strand=R; shift=1; score= 358.4; -kscmsdkgywgvCACGTGbC-- ; cor=0.929; Ncor=0.507; logoDP=0.476; NsEucl=0.952; NSW=0.972; rcor=64; rNcor=698; rlogoDP=947; rNsEucl=35; rNSW=48; rank_mean=358.400; match_rank= a 0 8 8 8 16 2 13 9 12 12 14 6 16 0 44 0 0 0 0 5 3 0 0 c 0 2 22 25 20 18 8 5 11 20 11 5 16 49 0 50 0 3 0 14 37 0 0 g 0 25 15 8 6 25 15 22 26 3 6 29 14 1 1 0 49 0 50 13 0 0 0 t 0 15 5 9 8 5 14 14 1 15 19 10 4 0 5 0 1 47 0 18 10 0 0
BEE2_M0161_1.02_CISBP_rc_shift11 (BEE2:M0161_1.02:CISBP_rc)	0.839	0.599	3.658	0.916	0.930	308	352	563	276	302	360.200		; assembly_6 versus BEE2_M0161_1.02_CISBP_rc (BEE2:M0161_1.02:CISBP_rc); m=160/266; ncol2=9; w=0; offset=2; strand=R; shift=11; score= 360.2; -----------hgCACGTGc--- ; cor=0.839; Ncor=0.599; logoDP=3.658; NsEucl=0.916; NSW=0.930; rcor=308; rNcor=352; rlogoDP=563; rNsEucl=276; rNSW=302; rank_mean=360.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 26 21 14 89 2 16 8 10 22 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 25 23 72 0 82 0 3 4 34 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 24 34 4 3 0 82 0 72 23 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 25 22 10 8 16 2 89 14 21 0 0 0
SPT_MA1061.1_JASPAR_rc_shift12 (SPT:MA1061.1:JASPAR_rc)	0.893	0.574	0.441	0.926	0.951	129	447	954	146	125	360.200		; assembly_6 versus SPT_MA1061.1_JASPAR_rc (SPT:MA1061.1:JASPAR_rc); m=161/266; ncol2=7; w=0; offset=3; strand=R; shift=12; score= 360.2; ------------gCACGTG---- ; cor=0.893; Ncor=0.574; logoDP=0.441; NsEucl=0.926; NSW=0.951; rcor=129; rNcor=447; rlogoDP=954; rNsEucl=146; rNSW=125; rank_mean=360.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 242 76 988 0 80 16 39 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 237 724 0 912 0 99 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 301 115 12 0 910 0 961 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 221 84 0 88 9 885 0 0 0 0 0
BIM1_MA0964.2_JASPAR_shift10 (BIM1:MA0964.2:JASPAR)	0.776	0.665	7.319	0.912	0.908	640	167	108	338	551	360.800		; assembly_6 versus BIM1_MA0964.2_JASPAR (BIM1:MA0964.2:JASPAR); m=162/266; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 360.8; ----------wrTCACGTGA--- ; cor=0.776; Ncor=0.665; logoDP=7.319; NsEucl=0.912; NSW=0.908; rcor=640; rNcor=167; rlogoDP=108; rNsEucl=338; rNSW=551; rank_mean=360.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 433 433 96 5 1380 1 11 7 3 1011 0 0 0 c 0 0 0 0 0 0 0 0 0 0 255 271 91 1377 1 1376 0 0 3 190 0 0 0 g 0 0 0 0 0 0 0 0 0 0 283 535 190 3 0 0 1376 1 1377 91 0 0 0 t 0 0 0 0 0 0 0 0 0 0 417 149 1011 3 7 11 1 1380 5 96 0 0 0
BEE2_MA0956.1_JASPAR_shift11 (BEE2:MA0956.1:JASPAR)	0.837	0.598	3.672	0.916	0.929	316	358	559	279	303	363.000		; assembly_6 versus BEE2_MA0956.1_JASPAR (BEE2:MA0956.1:JASPAR); m=163/266; ncol2=14; w=0; offset=2; strand=D; shift=11; score= 363; -----------hgCACGTGcd-- ; cor=0.837; Ncor=0.598; logoDP=3.672; NsEucl=0.916; NSW=0.929; rcor=316; rNcor=358; rlogoDP=559; rNsEucl=279; rNSW=303; rank_mean=363.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 256 211 136 893 23 157 74 104 218 255 0 0 c 0 0 0 0 0 0 0 0 0 0 0 253 229 722 0 820 0 33 38 342 236 0 0 g 0 0 0 0 0 0 0 0 0 0 0 236 342 38 33 0 820 0 722 229 253 0 0 t 0 0 0 0 0 0 0 0 0 0 0 255 218 104 74 157 23 893 136 211 256 0 0
bHLH74.ampDAP_M0179_AthalianaCistrome_shift13 (bHLH74.ampDAP:M0179:AthalianaCistrome)	0.875	0.500	7.419	0.904	0.927	172	714	98	506	331	364.200		; assembly_6 versus bHLH74.ampDAP_M0179_AthalianaCistrome (bHLH74.ampDAP:M0179:AthalianaCistrome); m=164/266; ncol2=10; w=0; offset=4; strand=D; shift=13; score= 364.2; -------------CACGTGAy-- ; cor=0.875; Ncor=0.500; logoDP=7.419; NsEucl=0.904; NSW=0.927; rcor=172; rNcor=714; rlogoDP=98; rNsEucl=506; rNSW=331; rank_mean=364.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 87 0 7 0 0 65 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 87 0 87 0 0 0 20 54 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 80 0 87 2 3 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 87 0 0 30 0 0
Transcription_5gnj_AB_3D-footprint_shift11 (Transcription:5gnj_AB:3D-footprint)	0.870	0.497	7.213	0.905	0.928	191	723	124	491	317	369.200		; assembly_6 versus Transcription_5gnj_AB_3D-footprint (Transcription:5gnj_AB:3D-footprint); m=165/266; ncol2=15; w=0; offset=2; strand=D; shift=11; score= 369.2; -----------taCACGTG---- ; cor=0.870; Ncor=0.497; logoDP=7.213; NsEucl=0.905; NSW=0.928; rcor=191; rNcor=723; rlogoDP=124; rNsEucl=491; rNSW=317; rank_mean=369.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 12 60 0 96 12 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 12 12 96 0 84 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 12 12 0 0 0 96 0 96 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 60 12 0 0 0 0 96 0 0 0 0 0
TGA1a_TGA1a_Athamap_rc_shift11 (TGA1a:TGA1a:Athamap_rc)	0.816	0.583	6.216	0.911	0.920	415	417	216	377	425	370.000		; assembly_6 versus TGA1a_TGA1a_Athamap_rc (TGA1a:TGA1a:Athamap_rc); m=166/266; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 370; -----------swsACGTSds-- ; cor=0.816; Ncor=0.583; logoDP=6.216; NsEucl=0.911; NSW=0.920; rcor=415; rNcor=417; rlogoDP=216; rNsEucl=377; rNSW=425; rank_mean=370.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 1 3 0 11 0 0 0 0 4 1 0 0 c 0 0 0 0 0 0 0 0 0 0 0 5 2 7 0 11 0 0 3 1 4 0 0 g 0 0 0 0 0 0 0 0 0 0 0 4 1 4 0 0 11 0 8 3 5 0 0 t 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 11 0 3 1 0 0
BIM3_MA0966.1_JASPAR_shift11 (BIM3:MA0966.1:JASPAR)	0.822	0.587	4.957	0.913	0.925	386	400	395	321	357	371.800		; assembly_6 versus BIM3_MA0966.1_JASPAR (BIM3:MA0966.1:JASPAR); m=167/266; ncol2=12; w=0; offset=2; strand=D; shift=11; score= 371.8; -----------rgCACGTGcy-- ; cor=0.822; Ncor=0.587; logoDP=4.957; NsEucl=0.913; NSW=0.925; rcor=386; rNcor=400; rlogoDP=395; rNsEucl=321; rNSW=357; rank_mean=371.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 294 159 74 942 15 67 33 96 243 233 0 0 c 0 0 0 0 0 0 0 0 0 0 0 203 165 821 0 918 0 25 8 433 270 0 0 g 0 0 0 0 0 0 0 0 0 0 0 270 433 8 25 0 918 0 821 165 203 0 0 t 0 0 0 0 0 0 0 0 0 0 0 233 243 96 33 67 15 942 74 159 294 0 0
EmBP-1_MA0128.1_JASPAR_shift12 (EmBP-1:MA0128.1:JASPAR)	0.871	0.498	6.378	0.907	0.930	184	720	205	460	297	373.200		; assembly_6 versus EmBP-1_MA0128.1_JASPAR (EmBP-1:MA0128.1:JASPAR); m=168/266; ncol2=9; w=0; offset=3; strand=D; shift=12; score= 373.2; ------------WsACGTGG--- ; cor=0.871; Ncor=0.498; logoDP=6.378; NsEucl=0.907; NSW=0.930; rcor=184; rNcor=720; rlogoDP=205; rNsEucl=460; rNSW=297; rank_mean=373.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 9 1 13 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 12 0 0 1 1 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 13 0 12 12 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 1 0 13 0 0 0 0 0
bHLH74_MA1360.1_JASPAR_rc_shift7 (bHLH74:MA1360.1:JASPAR_rc)	0.847	0.565	0.705	0.940	0.949	273	482	902	79	131	373.400		; assembly_6 versus bHLH74_MA1360.1_JASPAR_rc (bHLH74:MA1360.1:JASPAR_rc); m=169/266; ncol2=15; w=-2; offset=-2; strand=R; shift=7; score= 373.4; -------wgrtskCACGTGmyw- ; cor=0.847; Ncor=0.565; logoDP=0.705; NsEucl=0.940; NSW=0.949; rcor=273; rNcor=482; rlogoDP=902; rNsEucl=79; rNSW=131; rank_mean=373.400; match_rank= a 0 0 0 0 0 0 0 86 36 58 48 49 24 0 198 6 0 0 0 51 25 63 0 c 0 0 0 0 0 0 0 18 36 42 48 52 32 198 0 191 0 0 5 72 63 48 0 g 0 0 0 0 0 0 0 11 87 60 38 66 68 0 0 0 198 0 193 49 37 23 0 t 0 0 0 0 0 0 0 83 39 38 64 31 74 0 0 1 0 198 0 26 73 64 0
MYC4_MA0569.2_JASPAR_shift13 (MYC4:MA0569.2:JASPAR)	0.897	0.449	6.782	0.905	0.937	118	896	176	480	214	376.800		; assembly_6 versus MYC4_MA0569.2_JASPAR (MYC4:MA0569.2:JASPAR); m=170/266; ncol2=15; w=0; offset=4; strand=D; shift=13; score= 376.8; -------------CACGTGC--- ; cor=0.897; Ncor=0.449; logoDP=6.782; NsEucl=0.905; NSW=0.937; rcor=118; rNcor=896; rlogoDP=176; rNsEucl=480; rNSW=214; rank_mean=376.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 5 99 0 2 0 0 2 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 94 0 1 0 72 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 98 0 98 8 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 99 2 17 0 0 0
BIM1_M0163_1.02_CISBP_rc_shift10 (BIM1:M0163_1.02:CISBP_rc)	0.839	0.599	1.754	0.919	0.935	309	353	765	239	242	381.600		; assembly_6 versus BIM1_M0163_1.02_CISBP_rc (BIM1:M0163_1.02:CISBP_rc); m=171/266; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 381.6; ----------brkCACGtgv--- ; cor=0.839; Ncor=0.599; logoDP=1.754; NsEucl=0.919; NSW=0.935; rcor=309; rNcor=353; rlogoDP=765; rNsEucl=239; rNSW=242; rank_mean=381.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 23 27 18 1 98 0 15 14 12 25 0 0 0 c 0 0 0 0 0 0 0 0 0 0 26 24 15 99 0 80 2 18 10 28 0 0 0 g 0 0 0 0 0 0 0 0 0 0 25 34 30 0 2 6 77 10 65 25 0 0 0 t 0 0 0 0 0 0 0 0 0 0 26 15 37 0 0 14 6 58 13 22 0 0 0
DPBF3_MA1668.1_JASPAR_rc_shift8 (DPBF3:MA1668.1:JASPAR_rc)	0.810	0.667	0.994	0.929	0.929	459	159	858	130	305	382.200		; assembly_6 versus DPBF3_MA1668.1_JASPAR_rc (DPBF3:MA1668.1:JASPAR_rc); m=172/266; ncol2=8; w=-1; offset=-1; strand=R; shift=8; score= 382.2; --------wwgrtsAC------- ; cor=0.810; Ncor=0.667; logoDP=0.994; NsEucl=0.929; NSW=0.929; rcor=459; rNcor=159; rlogoDP=858; rNsEucl=130; rNSW=305; rank_mean=382.200; match_rank= a 0 0 0 0 0 0 0 0 578 457 266 582 338 23 1631 2 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 240 261 141 383 298 550 5 1611 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 316 253 914 461 18 929 6 15 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 511 674 324 219 991 143 3 17 0 0 0 0 0 0 0
BIM3_M0164_1.02_CISBP_rc_shift11 (BIM3:M0164_1.02:CISBP_rc)	0.820	0.585	4.998	0.913	0.924	402	407	388	336	378	382.200		; assembly_6 versus BIM3_M0164_1.02_CISBP_rc (BIM3:M0164_1.02:CISBP_rc); m=173/266; ncol2=7; w=0; offset=2; strand=R; shift=11; score= 382.2; -----------rgCACGT----- ; cor=0.820; Ncor=0.585; logoDP=4.998; NsEucl=0.913; NSW=0.924; rcor=402; rNcor=407; rlogoDP=388; rNsEucl=336; rNSW=378; rank_mean=382.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 29 16 7 94 1 7 3 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 21 16 82 0 92 0 2 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 27 44 1 3 0 92 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 23 24 10 3 7 1 95 0 0 0 0 0
MYC2_M0152_1.02_CISBP_rc_shift11 (MYC2:M0152_1.02:CISBP_rc)	0.823	0.588	4.163	0.914	0.925	378	395	494	314	349	386.000		; assembly_6 versus MYC2_M0152_1.02_CISBP_rc (MYC2:M0152_1.02:CISBP_rc); m=174/266; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 386; -----------hrCACGTGyk-- ; cor=0.823; Ncor=0.588; logoDP=4.163; NsEucl=0.914; NSW=0.925; rcor=378; rNcor=395; rlogoDP=494; rNsEucl=314; rNSW=349; rank_mean=386.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 27 25 12 85 1 13 6 3 18 24 0 0 c 0 0 0 0 0 0 0 0 0 0 0 27 20 85 1 86 0 7 0 37 21 0 0 g 0 0 0 0 0 0 0 0 0 0 0 21 37 0 8 0 86 1 85 20 28 0 0 t 0 0 0 0 0 0 0 0 0 0 0 25 18 3 6 13 1 86 12 25 27 0 0
bHLH34.ampDAP_M0168_AthalianaCistrome_rc_shift1 (bHLH34.ampDAP:M0168:AthalianaCistrome_rc)	0.886	0.524	0.249	0.944	0.959	140	625	1039	54	93	390.200		; assembly_6 versus bHLH34.ampDAP_M0168_AthalianaCistrome_rc (bHLH34.ampDAP:M0168:AthalianaCistrome_rc); m=175/266; ncol2=15; w=-8; offset=-8; strand=R; shift=1; score= 390.2; -rmrygtgkmwdrCAC------- ; cor=0.886; Ncor=0.524; logoDP=0.249; NsEucl=0.944; NSW=0.959; rcor=140; rNcor=625; rlogoDP=1039; rNsEucl=54; rNSW=93; rank_mean=390.200; match_rank= a 0 151 164 209 92 103 139 101 140 182 158 151 225 0 569 0 0 0 0 0 0 0 0 c 0 105 231 132 227 111 83 49 122 158 113 78 137 572 2 573 0 0 0 0 0 0 0 g 0 204 82 152 70 281 87 334 155 91 135 196 158 0 1 0 0 0 0 0 0 0 0 t 0 113 96 80 184 78 264 89 156 142 167 148 53 1 1 0 0 0 0 0 0 0 0
bZIP68_MA0968.1_JASPAR_rc_shift11 (bZIP68:MA0968.1:JASPAR_rc)	0.885	0.569	0.459	0.918	0.940	146	470	951	245	186	399.600		; assembly_6 versus bZIP68_MA0968.1_JASPAR_rc (bZIP68:MA0968.1:JASPAR_rc); m=176/266; ncol2=14; w=0; offset=2; strand=R; shift=11; score= 399.6; -----------kmCAcgtsd--- ; cor=0.885; Ncor=0.569; logoDP=0.459; NsEucl=0.918; NSW=0.940; rcor=146; rNcor=470; rlogoDP=951; rNsEucl=245; rNSW=186; rank_mean=399.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 101 382 17 914 88 131 111 220 289 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 134 542 951 0 634 148 137 264 123 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 476 73 0 58 163 651 131 332 336 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 289 2 32 28 116 70 621 184 252 0 0 0
Transcription_5gnj_GIN_3D-footprint_shift13 (Transcription:5gnj_GIN:3D-footprint)	0.908	0.454	3.215	0.916	0.951	100	876	619	277	128	400.000		; assembly_6 versus Transcription_5gnj_GIN_3D-footprint (Transcription:5gnj_GIN:3D-footprint); m=177/266; ncol2=7; w=0; offset=4; strand=D; shift=13; score= 400; -------------CaCGtGt--- ; cor=0.908; Ncor=0.454; logoDP=3.215; NsEucl=0.916; NSW=0.951; rcor=100; rNcor=876; rlogoDP=619; rNsEucl=277; rNSW=128; rank_mean=400.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59 4 3 13 0 19 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 92 13 80 19 8 2 20 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 4 67 13 93 19 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 8 7 62 1 38 0 0 0
NFYB2_UN0689.1_JASPAR_shift10 (NFYB2:UN0689.1:JASPAR)	0.810	0.578	5.428	0.910	0.919	458	430	307	384	427	401.200		; assembly_6 versus NFYB2_UN0689.1_JASPAR (NFYB2:UN0689.1:JASPAR); m=178/266; ncol2=7; w=0; offset=1; strand=D; shift=10; score= 401.2; ----------wkACACG------ ; cor=0.810; Ncor=0.578; logoDP=5.428; NsEucl=0.910; NSW=0.919; rcor=458; rNcor=430; rlogoDP=307; rNsEucl=384; rNSW=427; rank_mean=401.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 2030 1465 6742 0 6665 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 1475 1097 224 7151 27 7439 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 1388 2724 211 21 498 0 7439 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 2546 2153 262 267 249 0 0 0 0 0 0 0 0
GT-3a_MA1207.2_JASPAR_rc_shift5 (GT-3a:MA1207.2:JASPAR_rc)	0.895	0.497	0.439	0.933	0.955	123	722	955	113	108	404.200		; assembly_6 versus GT-3a_MA1207.2_JASPAR_rc (GT-3a:MA1207.2:JASPAR_rc); m=179/266; ncol2=15; w=-4; offset=-4; strand=R; shift=5; score= 404.2; -----ahwWtwwaCACGTG---- ; cor=0.895; Ncor=0.497; logoDP=0.439; NsEucl=0.933; NSW=0.955; rcor=123; rNcor=722; rlogoDP=955; rNsEucl=113; rNSW=108; rank_mean=404.200; match_rank= a 0 0 0 0 0 213 134 196 108 87 133 126 201 47 371 0 43 0 0 0 0 0 0 c 0 0 0 0 0 36 104 4 0 14 40 57 76 324 0 371 0 0 0 0 0 0 0 g 0 0 0 0 0 42 3 64 4 66 15 82 40 0 0 0 328 0 360 0 0 0 0 t 0 0 0 0 0 80 130 107 259 204 183 106 54 0 0 0 0 371 11 0 0 0 0
GLYMA-13G317000_UN0421.1_JASPAR_shift10 (GLYMA-13G317000:UN0421.1:JASPAR)	0.806	0.576	5.479	0.909	0.917	473	441	299	409	450	414.400		; assembly_6 versus GLYMA-13G317000_UN0421.1_JASPAR (GLYMA-13G317000:UN0421.1:JASPAR); m=180/266; ncol2=14; w=0; offset=1; strand=D; shift=10; score= 414.4; ----------wgACACGTgk--- ; cor=0.806; Ncor=0.576; logoDP=5.479; NsEucl=0.909; NSW=0.917; rcor=473; rNcor=441; rlogoDP=299; rNsEucl=409; rNSW=450; rank_mean=414.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 4020 3343 15158 11 13931 0 0 290 3774 3204 0 0 0 c 0 0 0 0 0 0 0 0 0 0 3522 2447 355 15390 118 15919 0 365 2289 2479 0 0 0 g 0 0 0 0 0 0 0 0 0 0 3422 6249 177 93 1340 0 15919 65 7596 4529 0 0 0 t 0 0 0 0 0 0 0 0 0 0 4955 3880 229 425 530 0 0 15199 2260 5707 0 0 0
BIM2.DAP_M0157_AthalianaCistrome_rc_shift4 (BIM2.DAP:M0157:AthalianaCistrome_rc)	0.902	0.475	0.471	0.933	0.956	108	805	948	110	104	415.000		; assembly_6 versus BIM2.DAP_M0157_AthalianaCistrome_rc (BIM2.DAP:M0157:AthalianaCistrome_rc); m=181/266; ncol2=9; w=-5; offset=-5; strand=R; shift=4; score= 415; ----cgtgmrwgk---------- ; cor=0.902; Ncor=0.475; logoDP=0.471; NsEucl=0.933; NSW=0.956; rcor=108; rNcor=805; rlogoDP=948; rNsEucl=110; rNSW=104; rank_mean=415.000; match_rank= a 0 0 0 0 47 125 56 86 176 213 200 126 64 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 308 43 126 53 172 87 86 131 37 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 110 373 86 395 113 166 117 288 199 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 135 59 332 66 139 134 197 55 300 0 0 0 0 0 0 0 0 0 0
MYC4_M0160_1.02_CISBP_shift11 (MYC4:M0160_1.02:CISBP)	0.816	0.583	3.885	0.912	0.922	417	418	530	344	386	419.000		; assembly_6 versus MYC4_M0160_1.02_CISBP (MYC4:M0160_1.02:CISBP); m=182/266; ncol2=13; w=0; offset=2; strand=D; shift=11; score= 419; -----------mrCACGTGyk-- ; cor=0.816; Ncor=0.583; logoDP=3.885; NsEucl=0.912; NSW=0.922; rcor=417; rNcor=418; rlogoDP=530; rNsEucl=344; rNSW=386; rank_mean=419.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 28 26 13 86 3 15 7 4 19 24 0 0 c 0 0 0 0 0 0 0 0 0 0 0 28 19 83 0 82 0 7 1 36 20 0 0 g 0 0 0 0 0 0 0 0 0 0 0 20 36 1 7 0 82 0 82 19 28 0 0 t 0 0 0 0 0 0 0 0 0 0 0 24 19 3 7 15 3 86 13 26 28 0 0
BZIP63_MA1745.1_JASPAR_shift9 (BZIP63:MA1745.1:JASPAR)	0.752	0.645	5.610	0.913	0.909	763	207	275	322	528	419.000		; assembly_6 versus BZIP63_MA1745.1_JASPAR (BZIP63:MA1745.1:JASPAR); m=183/266; ncol2=10; w=0; offset=0; strand=D; shift=9; score= 419; ---------tgctsACGTG---- ; cor=0.752; Ncor=0.645; logoDP=5.610; NsEucl=0.913; NSW=0.909; rcor=763; rNcor=207; rlogoDP=275; rNsEucl=322; rNSW=528; rank_mean=419.000; match_rank= a 0 0 0 0 0 0 0 0 0 229 203 188 166 0.04 1000 0.04 0.04 21 47 0 0 0 0 c 0 0 0 0 0 0 0 0 0 229 203 437 148.14 356 0.04 1000 0.04 21 123.19 0 0 0 0 g 0 0 0 0 0 0 0 0 0 229 390 188 21 644 0.04 0.04 1000 21 783 0 0 0 0 t 0 0 0 0 0 0 0 0 0 313 203 188 665 0 0 0 0 937 47 0 0 0 0
ZCW32_M0153_1.02_CISBP_rc_shift12 (ZCW32:M0153_1.02:CISBP_rc)	0.870	0.559	0.549	0.917	0.938	189	507	934	259	206	419.000		; assembly_6 versus ZCW32_M0153_1.02_CISBP_rc (ZCW32:M0153_1.02:CISBP_rc); m=184/266; ncol2=11; w=0; offset=3; strand=R; shift=12; score= 419; ------------sCACGTgss-- ; cor=0.870; Ncor=0.559; logoDP=0.549; NsEucl=0.917; NSW=0.938; rcor=189; rNcor=507; rlogoDP=934; rNsEucl=259; rNSW=206; rank_mean=419.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 21 2 94 1 19 7 15 22 21 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 26 93 0 83 3 14 13 26 29 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 34 4 4 0 76 10 52 30 27 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 19 1 2 16 2 69 20 22 23 0 0
bZIP16.ampDAP_M0197_AthalianaCistrome_rc_shift10 (bZIP16.ampDAP:M0197:AthalianaCistrome_rc)	0.809	0.658	1.044	0.922	0.921	461	177	844	200	414	419.200		; assembly_6 versus bZIP16.ampDAP_M0197_AthalianaCistrome_rc (bZIP16.ampDAP:M0197:AthalianaCistrome_rc); m=185/266; ncol2=7; w=0; offset=1; strand=R; shift=10; score= 419.2; ----------TGCCACG------ ; cor=0.809; Ncor=0.658; logoDP=1.044; NsEucl=0.922; NSW=0.921; rcor=461; rNcor=177; rlogoDP=844; rNsEucl=200; rNSW=414; rank_mean=419.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 27 0 89 0 597 0 5 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 90 0 508 597 0 592 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 41 539 0 0 0 0 592 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 439 58 0 0 0 5 0 0 0 0 0 0 0
GBF6.ampDAP_M0222_AthalianaCistrome_shift7 (GBF6.ampDAP:M0222:AthalianaCistrome)	0.753	0.612	6.792	0.915	0.906	755	300	173	293	581	420.400		; assembly_6 versus GBF6.ampDAP_M0222_AthalianaCistrome (GBF6.ampDAP:M0222:AthalianaCistrome); m=186/266; ncol2=11; w=-2; offset=-2; strand=D; shift=7; score= 420.4; -------dwwgmTgACGT----- ; cor=0.753; Ncor=0.612; logoDP=6.792; NsEucl=0.915; NSW=0.906; rcor=755; rNcor=300; rlogoDP=173; rNsEucl=293; rNSW=581; rank_mean=420.400; match_rank= a 0 0 0 0 0 0 0 185 183 146 80 155 89 6 533 0 6 1 0 0 0 0 0 c 0 0 0 0 0 0 0 52 86 55 23 205 57 107 0 533 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 143 86 78 300 120 6 359 0 0 527 0 0 0 0 0 0 t 0 0 0 0 0 0 0 153 178 254 130 53 381 61 0 0 0 532 0 0 0 0 0
BZIP86_Mo17_1_EEAD0303_EEADannot_shift11 (BZIP86_Mo17_1:EEAD0303:EEADannot)	0.787	0.618	4.922	0.911	0.913	567	278	403	363	494	421.000		; assembly_6 versus BZIP86_Mo17_1_EEAD0303_EEADannot (BZIP86_Mo17_1:EEAD0303:EEADannot); m=187/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 421; -----------GCCACGTsrb-- ; cor=0.787; Ncor=0.618; logoDP=4.922; NsEucl=0.911; NSW=0.913; rcor=567; rNcor=278; rlogoDP=403; rNsEucl=363; rNSW=494; rank_mean=421.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 19 0 91 3 9 0 6 59 8 0 0 c 0 0 0 0 0 0 0 0 0 0 0 5 78 100 7 81 11 5 65 5 33 0 0 g 0 0 0 0 0 0 0 0 0 0 0 80 0 0 0 3 77 0 28 28 34 0 0 t 0 0 0 0 0 0 0 0 0 0 0 12 3 0 2 13 3 95 1 8 25 0 0
At4g17880_MA0569.1_JASPAR_shift12 (At4g17880:MA0569.1:JASPAR)	0.855	0.488	6.798	0.901	0.921	245	763	172	580	406	433.200		; assembly_6 versus At4g17880_MA0569.1_JASPAR (At4g17880:MA0569.1:JASPAR); m=188/266; ncol2=15; w=0; offset=3; strand=D; shift=12; score= 433.2; ------------rCACGTGC--- ; cor=0.855; Ncor=0.488; logoDP=6.798; NsEucl=0.901; NSW=0.921; rcor=245; rNcor=763; rlogoDP=172; rNsEucl=580; rNSW=406; rank_mean=433.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 38 5 99 0 2 0 0 2 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 18 95 0 94 0 1 0 72 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 98 0 98 8 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 8 0 1 6 0 99 2 17 0 0 0
BHLH49_MA1740.2_JASPAR_shift13 (BHLH49:MA1740.2:JASPAR)	0.885	0.443	7.578	0.896	0.924	144	918	79	678	373	438.400		; assembly_6 versus BHLH49_MA1740.2_JASPAR (BHLH49:MA1740.2:JASPAR); m=189/266; ncol2=8; w=0; offset=4; strand=D; shift=13; score= 438.4; -------------CACGTGC--- ; cor=0.885; Ncor=0.443; logoDP=7.578; NsEucl=0.896; NSW=0.924; rcor=144; rNcor=918; rlogoDP=79; rNsEucl=678; rNSW=373; rank_mean=438.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1000 0 0 0 0 90 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 1000 0 1000 0 0 0 809 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1000 0 1000 83 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1000 0 18 0 0 0
BAM8.ampDAP_M0155_AthalianaCistrome_shift7 (BAM8.ampDAP:M0155:AthalianaCistrome)	0.748	0.608	7.516	0.912	0.898	781	314	85	350	664	438.800		; assembly_6 versus BAM8.ampDAP_M0155_AthalianaCistrome (BAM8.ampDAP:M0155:AthalianaCistrome); m=190/266; ncol2=15; w=-2; offset=-2; strand=D; shift=7; score= 438.8; -------arttsrCACGTGTsr- ; cor=0.748; Ncor=0.608; logoDP=7.516; NsEucl=0.912; NSW=0.898; rcor=781; rNcor=314; rlogoDP=85; rNsEucl=350; rNSW=664; rank_mean=438.800; match_rank= a 0 0 0 0 0 0 0 208 151 67 126 44 296 0 590 0 0 0 0 37 19 317 0 c 0 0 0 0 0 0 0 146 132 129 87 268 0 564 0 590 0 2 0 81 161 7 0 g 0 0 0 0 0 0 0 131 166 114 72 174 289 0 0 0 590 0 590 44 397 188 0 t 0 0 0 0 0 0 0 105 141 280 305 104 5 26 0 0 0 588 0 428 13 78 0
BHLH57_ZmJAM1_Mo17_1_EEAD0227_EEADannot_rc_shift5 (BHLH57_ZmJAM1_Mo17_1:EEAD0227:EEADannot_rc)	0.842	0.515	0.997	0.924	0.937	291	664	857	169	215	439.200		; assembly_6 versus BHLH57_ZmJAM1_Mo17_1_EEAD0227_EEADannot_rc (BHLH57_ZmJAM1_Mo17_1:EEAD0227:EEADannot_rc); m=191/266; ncol2=14; w=-4; offset=-4; strand=R; shift=5; score= 439.2; -----wwwWwwrrCACGTG---- ; cor=0.842; Ncor=0.515; logoDP=0.997; NsEucl=0.924; NSW=0.937; rcor=291; rNcor=664; rlogoDP=857; rNsEucl=169; rNSW=215; rank_mean=439.200; match_rank= a 0 0 0 0 0 47 55 47 28 31 30 38 29 1 100 0 24 0 0 0 0 0 0 c 0 0 0 0 0 15 4 1 0 7 12 21 16 99 0 99 0 0 0 0 0 0 0 g 0 0 0 0 0 10 5 2 0 6 15 26 38 0 0 0 76 0 94 0 0 0 0 t 0 0 0 0 0 28 36 50 72 56 43 15 17 0 0 1 0 100 6 0 0 0 0
BHLH57_ZmJAM1_B73_1_m1_EEAD0226_EEADannot_rc_shift6 (BHLH57_ZmJAM1_B73_1_m1:EEAD0226:EEADannot_rc)	0.839	0.543	0.598	0.924	0.936	306	561	926	178	226	439.400		; assembly_6 versus BHLH57_ZmJAM1_B73_1_m1_EEAD0226_EEADannot_rc (BHLH57_ZmJAM1_B73_1_m1:EEAD0226:EEADannot_rc); m=192/266; ncol2=11; w=-3; offset=-3; strand=R; shift=6; score= 439.4; ------wwwwwarCACG------ ; cor=0.839; Ncor=0.543; logoDP=0.598; NsEucl=0.924; NSW=0.936; rcor=306; rNcor=561; rlogoDP=926; rNsEucl=178; rNSW=226; rank_mean=439.400; match_rank= a 0 0 0 0 0 0 61 48 32 30 37 43 36 1 100 0 18 0 0 0 0 0 0 c 0 0 0 0 0 0 4 1 1 7 14 21 11 99 0 95 0 0 0 0 0 0 0 g 0 0 0 0 0 0 2 0 0 7 13 24 41 0 0 0 82 0 0 0 0 0 0 t 0 0 0 0 0 0 33 51 67 56 36 12 12 0 0 5 0 0 0 0 0 0 0
bHLH34_MA0962.2_JASPAR_shift12 (bHLH34:MA0962.2:JASPAR)	0.876	0.438	6.162	0.900	0.930	165	933	222	595	294	441.800		; assembly_6 versus bHLH34_MA0962.2_JASPAR (bHLH34:MA0962.2:JASPAR); m=193/266; ncol2=11; w=0; offset=3; strand=D; shift=12; score= 441.8; ------------gCACGTG---- ; cor=0.876; Ncor=0.438; logoDP=6.162; NsEucl=0.900; NSW=0.930; rcor=165; rNcor=933; rlogoDP=222; rNsEucl=595; rNSW=294; rank_mean=441.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 154 0 727 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 39 999 0 848 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 653 0 242 0 999 0 999 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 154 0 31 152 0 999 0 0 0 0 0
ABF4_MA1659.2_JASPAR_rc_shift13 (ABF4:MA1659.2:JASPAR_rc)	0.912	0.456	0.893	0.917	0.952	90	868	876	262	123	443.800		; assembly_6 versus ABF4_MA1659.2_JASPAR_rc (ABF4:MA1659.2:JASPAR_rc); m=194/266; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 443.8; -------------sACGTGG--- ; cor=0.912; Ncor=0.456; logoDP=0.893; NsEucl=0.917; NSW=0.952; rcor=90; rNcor=868; rlogoDP=876; rNsEucl=262; rNSW=123; rank_mean=443.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 253 5815 200 161 73 62 155 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 1825 52 5470 44 47 86 62 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 3358 58 166 5666 20 5763 5169 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 610 121 210 175 5906 135 660 0 0 0
BHLH91_MYC2B_B73_1_m1_EEAD0234_EEADannot_shift4 (BHLH91_MYC2B_B73_1_m1:EEAD0234:EEADannot)	0.823	0.433	5.290	0.917	0.930	377	948	335	269	292	444.200		; assembly_6 versus BHLH91_MYC2B_B73_1_m1_EEAD0234_EEADannot (BHLH91_MYC2B_B73_1_m1:EEAD0234:EEADannot); m=195/266; ncol2=10; w=-5; offset=-5; strand=D; shift=4; score= 444.2; ----mayrwkwaaC--------- ; cor=0.823; Ncor=0.433; logoDP=5.290; NsEucl=0.917; NSW=0.930; rcor=377; rNcor=948; rlogoDP=335; rNsEucl=269; rNSW=292; rank_mean=444.200; match_rank= a 0 0 0 0 25 53 18 47 30 14 30 57 57 23 0 0 0 0 0 0 0 0 0 c 0 0 0 0 47 12 43 2 6 6 8 12 16 77 0 0 0 0 0 0 0 0 0 g 0 0 0 0 12 17 4 34 1 27 14 7 17 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 16 18 35 17 63 53 48 24 10 0 0 0 0 0 0 0 0 0 0
BIM1.DAP_M0169_AthalianaCistrome_rc_shift5 (BIM1.DAP:M0169:AthalianaCistrome_rc)	0.885	0.491	0.260	0.925	0.944	147	746	1032	161	157	448.600		; assembly_6 versus BIM1.DAP_M0169_AthalianaCistrome_rc (BIM1.DAP:M0169:AthalianaCistrome_rc); m=196/266; ncol2=18; w=-4; offset=-4; strand=R; shift=5; score= 448.6; -----gkgrrwgTCACGTG---- ; cor=0.885; Ncor=0.491; logoDP=0.260; NsEucl=0.925; NSW=0.944; rcor=147; rNcor=746; rlogoDP=1032; rNsEucl=161; rNSW=157; rank_mean=448.600; match_rank= a 0 0 0 0 0 135 87 141 164 213 178 125 28 0 566 0 0 0 0 0 0 0 0 c 0 0 0 0 0 62 88 71 110 58 77 67 9 566 0 563 0 0 0 0 0 0 0 g 0 0 0 0 0 249 151 265 173 164 130 371 121 0 0 0 566 0 566 0 0 0 0 t 0 0 0 0 0 120 240 89 119 131 181 3 408 0 0 3 0 566 0 0 0 0 0
GBF2_M0266_1.02_CISBP_shift11 (GBF2:M0266_1.02:CISBP)	0.851	0.547	2.403	0.908	0.924	257	546	727	421	368	463.800		; assembly_6 versus GBF2_M0266_1.02_CISBP (GBF2:M0266_1.02:CISBP); m=197/266; ncol2=12; w=0; offset=2; strand=D; shift=11; score= 463.8; -----------kmCAcgtvr--- ; cor=0.851; Ncor=0.547; logoDP=2.403; NsEucl=0.908; NSW=0.924; rcor=257; rNcor=546; rlogoDP=727; rNsEucl=421; rNSW=368; rank_mean=463.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 12 37 3 94 9 14 14 25 31 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 17 50 88 0 59 20 18 28 14 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 43 12 0 6 22 59 14 29 35 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 28 1 9 0 10 7 54 18 20 0 0 0
AL4G45550.t1_BZIP_1_AT2G46270_EEAD0590_EEADannot_rc_shift9 (AL4G45550.t1_BZIP_1_AT2G46270:EEAD0590:EEADannot_rc)	0.781	0.725	0.916	0.917	0.910	611	63	872	263	523	466.400		; assembly_6 versus AL4G45550.t1_BZIP_1_AT2G46270_EEAD0590_EEADannot_rc (AL4G45550.t1_BZIP_1_AT2G46270:EEAD0590:EEADannot_rc); m=198/266; ncol2=8; w=0; offset=0; strand=R; shift=9; score= 466.4; ---------wkctsACG------ ; cor=0.781; Ncor=0.725; logoDP=0.916; NsEucl=0.917; NSW=0.910; rcor=611; rNcor=63; rlogoDP=872; rNsEucl=263; rNSW=523; rank_mean=466.400; match_rank= a 0 0 0 0 0 0 0 0 0 25 8 23 18 2 100 0 2 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 7 4 45 23 30 0 99 2 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 5 62 20 0 57 0 0 96 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 63 26 12 59 11 0 1 0 0 0 0 0 0 0
BHLH49_MA1740.1_JASPAR_shift11 (BHLH49:MA1740.1:JASPAR)	0.790	0.564	7.582	0.899	0.899	555	487	78	609	660	477.800		; assembly_6 versus BHLH49_MA1740.1_JASPAR (BHLH49:MA1740.1:JASPAR); m=199/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 477.8; -----------arCACGTGCc-- ; cor=0.790; Ncor=0.564; logoDP=7.582; NsEucl=0.899; NSW=0.899; rcor=555; rNcor=487; rlogoDP=78; rNsEucl=609; rNSW=660; rank_mean=477.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 304 299 0.04 1000 0.04 0.04 0.04 0.04 90 212.5 0 0 c 0 0 0 0 0 0 0 0 0 0 0 232 135 1000 0.04 1000 0.04 0.04 0.04 808.94 338 0 0 g 0 0 0 0 0 0 0 0 0 0 0 232 360 0.04 0.04 0.04 1000 0.04 1000 83 237 0 0 t 0 0 0 0 0 0 0 0 0 0 0 232 206 0 0 0 0 1000 0 18 212 0 0
BES1_MA0549.1_JASPAR_rc_shift10 (BES1:MA0549.1:JASPAR_rc)	0.804	0.631	0.889	0.913	0.916	483	237	878	337	468	480.600		; assembly_6 versus BES1_MA0549.1_JASPAR_rc (BES1:MA0549.1:JASPAR_rc); m=200/266; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 480.6; ----------bsmCACGTGyg-- ; cor=0.804; Ncor=0.631; logoDP=0.889; NsEucl=0.913; NSW=0.916; rcor=483; rNcor=237; rlogoDP=878; rNsEucl=337; rNSW=468; rank_mean=480.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 1 3 42 0 99 0 0 6 0 0 21 0 0 c 0 0 0 0 0 0 0 0 0 0 33 46 36 96 0 99 0 4 0 50 10 0 0 g 0 0 0 0 0 0 0 0 0 0 29 33 5 0 0 0 99 0 99 8 45 0 0 t 0 0 0 0 0 0 0 0 0 0 36 17 16 3 0 0 0 89 0 41 23 0 0
PK18474.1_M0149_1.02_CISBP_shift13 (PK18474.1:M0149_1.02:CISBP)	0.895	0.447	2.452	0.906	0.938	125	903	723	469	209	485.800		; assembly_6 versus PK18474.1_M0149_1.02_CISBP (PK18474.1:M0149_1.02:CISBP); m=201/266; ncol2=15; w=0; offset=4; strand=D; shift=13; score= 485.8; -------------caCGTGc--- ; cor=0.895; Ncor=0.447; logoDP=2.452; NsEucl=0.906; NSW=0.938; rcor=125; rNcor=903; rlogoDP=723; rNsEucl=469; rNSW=209; rank_mean=485.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 24 62 7 19 2 17 14 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 54 8 73 0 13 1 45 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 13 12 0 77 0 76 21 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 9 18 20 4 85 6 20 0 0 0
LOC_Os01g46970.1_BZIP_1_AT2G46270_EEAD0622_EEADannot_rc_shift11 (LOC_Os01g46970.1_BZIP_1_AT2G46270:EEAD0622:EEADannot_rc)	0.804	0.632	0.899	0.911	0.913	480	236	874	367	496	490.600		; assembly_6 versus LOC_Os01g46970.1_BZIP_1_AT2G46270_EEAD0622_EEADannot_rc (LOC_Os01g46970.1_BZIP_1_AT2G46270:EEAD0622:EEADannot_rc); m=202/266; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 490.6; -----------GCCACGTsagm- ; cor=0.804; Ncor=0.632; logoDP=0.899; NsEucl=0.911; NSW=0.913; rcor=480; rNcor=236; rlogoDP=874; rNsEucl=367; rNSW=496; rank_mean=490.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 21 0 100 0 1 0 11 58 10 32 0 c 0 0 0 0 0 0 0 0 0 0 0 0 79 100 0 95 1 0 58 0 22 58 0 g 0 0 0 0 0 0 0 0 0 0 0 79 0 0 0 1 98 0 31 20 48 3 0 t 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 4 0 100 0 22 20 7 0
GLYMA-08G357600_UN0420.1_JASPAR_rc_shift9 (GLYMA-08G357600:UN0420.1:JASPAR_rc)	0.818	0.584	0.288	0.915	0.927	410	414	1008	302	327	492.200		; assembly_6 versus GLYMA-08G357600_UN0420.1_JASPAR_rc (GLYMA-08G357600:UN0420.1:JASPAR_rc); m=203/266; ncol2=8; w=0; offset=0; strand=R; shift=9; score= 492.2; ---------dwGACACG------ ; cor=0.818; Ncor=0.584; logoDP=0.288; NsEucl=0.915; NSW=0.927; rcor=410; rNcor=414; rlogoDP=1008; rNsEucl=302; rNSW=327; rank_mean=492.200; match_rank= a 0 0 0 0 0 0 0 0 0 1880 1663 52 5554 81 5525 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 1209 1558 0 525 5839 124 6412 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 1654 1368 6073 134 191 547 1 6396 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 1670 1824 288 200 302 217 0 17 0 0 0 0 0 0
BZIP2_DLF1_B73_2_m1_EEAD0268_EEADannot_shift7 (BZIP2_DLF1_B73_2_m1:EEAD0268:EEADannot)	0.739	0.601	6.686	0.909	0.893	818	348	183	402	719	494.000		; assembly_6 versus BZIP2_DLF1_B73_2_m1_EEAD0268_EEADannot (BZIP2_DLF1_B73_2_m1:EEAD0268:EEADannot); m=204/266; ncol2=7; w=-2; offset=-2; strand=D; shift=7; score= 494; -------rrtGvTG--------- ; cor=0.739; Ncor=0.601; logoDP=6.686; NsEucl=0.909; NSW=0.893; rcor=818; rNcor=348; rlogoDP=183; rNsEucl=402; rNSW=719; rank_mean=494.000; match_rank= a 0 0 0 0 0 0 0 28 31 15 7 31 13 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 18 19 18 8 26 11 20 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 40 36 21 76 36 2 76 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 14 14 46 9 7 74 4 0 0 0 0 0 0 0 0 0
BHLH3_MA0957.1_JASPAR_shift12 (BHLH3:MA0957.1:JASPAR)	0.836	0.478	5.724	0.897	0.916	319	790	265	643	466	496.600		; assembly_6 versus BHLH3_MA0957.1_JASPAR (BHLH3:MA0957.1:JASPAR); m=205/266; ncol2=10; w=0; offset=3; strand=D; shift=12; score= 496.6; ------------rCACGTGy--- ; cor=0.836; Ncor=0.478; logoDP=5.724; NsEucl=0.897; NSW=0.916; rcor=319; rNcor=790; rlogoDP=265; rNsEucl=643; rNSW=466; rank_mean=496.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 258 45 950 10 42 22 11 44 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 94 930 7 937 12 20 14 603 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 603 14 20 12 937 7 930 94 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 44 11 22 42 10 950 45 258 0 0 0
GBF3_MA1351.1_JASPAR_rc_shift7 (GBF3:MA1351.1:JASPAR_rc)	0.782	0.636	1.122	0.916	0.908	598	225	832	281	552	497.600		; assembly_6 versus GBF3_MA1351.1_JASPAR_rc (GBF3:MA1351.1:JASPAR_rc); m=206/266; ncol2=7; w=-2; offset=-2; strand=R; shift=7; score= 497.6; -------dwwksts--------- ; cor=0.782; Ncor=0.636; logoDP=1.122; NsEucl=0.916; NSW=0.908; rcor=598; rNcor=225; rlogoDP=832; rNsEucl=281; rNSW=552; rank_mean=497.600; match_rank= a 0 0 0 0 0 0 0 204 228 181 29 143 70 2 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 54 67 39 12 251 134 170 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 169 114 72 394 166 0 374 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 169 187 304 161 36 392 50 0 0 0 0 0 0 0 0 0
BHLH149_MYC2A_Mo17_1_EEAD0216_EEADannot_rc_shift5 (BHLH149_MYC2A_Mo17_1:EEAD0216:EEADannot_rc)	0.841	0.467	0.604	0.920	0.936	294	834	924	226	224	500.400		; assembly_6 versus BHLH149_MYC2A_Mo17_1_EEAD0216_EEADannot_rc (BHLH149_MYC2A_Mo17_1:EEAD0216:EEADannot_rc); m=207/266; ncol2=13; w=-4; offset=-4; strand=R; shift=5; score= 500.4; -----wwwWwwarCAyGT----- ; cor=0.841; Ncor=0.467; logoDP=0.604; NsEucl=0.920; NSW=0.936; rcor=294; rNcor=834; rlogoDP=924; rNsEucl=226; rNSW=224; rank_mean=500.400; match_rank= a 0 0 0 0 0 53 51 50 27 34 39 52 53 6 100 0 11 1 0 0 0 0 0 c 0 0 0 0 0 12 9 1 1 6 10 17 16 94 0 62 0 1 0 0 0 0 0 g 0 0 0 0 0 10 2 3 0 6 10 14 25 0 0 0 89 0 0 0 0 0 0 t 0 0 0 0 0 25 38 46 72 54 41 17 6 0 0 38 0 98 0 0 0 0 0
BZIP91_B73_1_m1_EEAD0309_EEADannot_shift11 (BZIP91_B73_1_m1:EEAD0309:EEADannot)	0.764	0.600	5.435	0.905	0.900	704	351	305	499	646	501.000		; assembly_6 versus BZIP91_B73_1_m1_EEAD0309_EEADannot (BZIP91_B73_1_m1:EEAD0309:EEADannot); m=208/266; ncol2=13; w=0; offset=2; strand=D; shift=11; score= 501; -----------rTGACGTGKcm- ; cor=0.764; Ncor=0.600; logoDP=5.435; NsEucl=0.905; NSW=0.900; rcor=704; rNcor=351; rlogoDP=305; rNsEucl=499; rNSW=646; rank_mean=501.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 39 4 1 94 0 8 1 2 2 18 42 0 c 0 0 0 0 0 0 0 0 0 0 0 10 15 16 0 97 0 4 1 4 67 26 0 g 0 0 0 0 0 0 0 0 0 0 0 42 4 79 5 1 92 1 95 68 7 20 0 t 0 0 0 0 0 0 0 0 0 0 0 9 77 4 1 2 0 94 2 26 8 12 0
BZIP86_B73_1_m1_EEAD0302_EEADannot_rc_shift11 (BZIP86_B73_1_m1:EEAD0302:EEADannot_rc)	0.793	0.623	1.014	0.911	0.913	537	271	848	365	495	503.200		; assembly_6 versus BZIP86_B73_1_m1_EEAD0302_EEADannot_rc (BZIP86_B73_1_m1:EEAD0302:EEADannot_rc); m=209/266; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 503.2; -----------GCCACGTsrgC- ; cor=0.793; Ncor=0.623; logoDP=1.014; NsEucl=0.911; NSW=0.913; rcor=537; rNcor=271; rlogoDP=848; rNsEucl=365; rNSW=495; rank_mean=503.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 2 20 0 100 4 12 1 8 53 10 21 0 c 0 0 0 0 0 0 0 0 0 0 0 1 80 100 0 88 8 12 61 3 23 69 0 g 0 0 0 0 0 0 0 0 0 0 0 87 0 0 0 2 80 0 29 35 43 4 0 t 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 6 0 87 2 9 24 6 0
RAP-1_MA0566.1_JASPAR_shift12 (RAP-1:MA0566.1:JASPAR)	0.831	0.475	5.631	0.897	0.916	348	804	270	644	467	506.600		; assembly_6 versus RAP-1_MA0566.1_JASPAR (RAP-1:MA0566.1:JASPAR); m=210/266; ncol2=7; w=0; offset=3; strand=D; shift=12; score= 506.6; ------------rCACGTG---- ; cor=0.831; Ncor=0.475; logoDP=5.631; NsEucl=0.897; NSW=0.916; rcor=348; rNcor=804; rlogoDP=270; rNsEucl=644; rNSW=467; rank_mean=506.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 25 9 97 0 15 1 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 10 91 0 85 0 2 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 60 0 2 0 85 0 91 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 5 0 1 15 0 97 9 0 0 0 0
BHLH104_MA0960.1_JASPAR_shift11 (BHLH104:MA0960.1:JASPAR)	0.800	0.572	7.945	0.893	0.885	503	458	52	733	806	510.400		; assembly_6 versus BHLH104_MA0960.1_JASPAR (BHLH104:MA0960.1:JASPAR); m=211/266; ncol2=11; w=0; offset=2; strand=D; shift=11; score= 510.4; -----------GGCACGTGCC-- ; cor=0.800; Ncor=0.572; logoDP=7.945; NsEucl=0.893; NSW=0.885; rcor=503; rNcor=458; rlogoDP=52; rNsEucl=733; rNSW=806; rank_mean=510.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 130 15 6 996 0 1 0 0 45 22 0 0 c 0 0 0 0 0 0 0 0 0 0 0 26 74 994 0 999 0 4 0 866 822 0 0 g 0 0 0 0 0 0 0 0 0 0 0 822 866 0 4 0 999 0 994 74 26 0 0 t 0 0 0 0 0 0 0 0 0 0 0 22 45 0 0 1 0 996 6 15 130 0 0
BIM3.DAP_M0174_AthalianaCistrome_rc_shift11 (BIM3.DAP:M0174:AthalianaCistrome_rc)	0.825	0.495	0.432	0.923	0.928	369	729	957	189	311	511.000		; assembly_6 versus BIM3.DAP_M0174_AthalianaCistrome_rc (BIM3.DAP:M0174:AthalianaCistrome_rc); m=212/266; ncol2=11; w=0; offset=2; strand=R; shift=11; score= 511; -----------gkCACGTGasw- ; cor=0.825; Ncor=0.495; logoDP=0.432; NsEucl=0.923; NSW=0.928; rcor=369; rNcor=729; rlogoDP=957; rNsEucl=189; rNSW=311; rank_mean=511.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 33 13 0 137 0 0 0 0 80 2 48 0 c 0 0 0 0 0 0 0 0 0 0 0 20 11 137 0 137 0 0 0 32 59 24 0 g 0 0 0 0 0 0 0 0 0 0 0 80 36 0 0 0 137 0 137 16 48 28 0 t 0 0 0 0 0 0 0 0 0 0 0 4 77 0 0 0 0 137 0 9 28 37 0
AtbZIP63_M0272_1.02_CISBP_rc_shift11 (AtbZIP63:M0272_1.02:CISBP_rc)	0.754	0.646	1.754	0.913	0.910	750	201	766	317	524	511.600		; assembly_6 versus AtbZIP63_M0272_1.02_CISBP_rc (AtbZIP63:M0272_1.02:CISBP_rc); m=213/266; ncol2=11; w=0; offset=2; strand=R; shift=11; score= 511.6; -----------gcCACGTsagc- ; cor=0.754; Ncor=0.646; logoDP=1.754; NsEucl=0.913; NSW=0.910; rcor=750; rNcor=201; rlogoDP=766; rNsEucl=317; rNSW=524; rank_mean=511.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 23 20 5 94 0 0 0 0 66 19 20 0 c 0 0 0 0 0 0 0 0 0 0 0 23 60 78 2 100 0 0 64 2 19 40 0 g 0 0 0 0 0 0 0 0 0 0 0 31 6 12 2 0 100 0 36 15 43 20 0 t 0 0 0 0 0 0 0 0 0 0 0 23 14 5 2 0 0 100 0 17 19 20 0
BHLH13_MA0958.1_JASPAR_shift12 (BHLH13:MA0958.1:JASPAR)	0.834	0.477	6.838	0.893	0.909	330	795	166	726	544	512.200		; assembly_6 versus BHLH13_MA0958.1_JASPAR (BHLH13:MA0958.1:JASPAR); m=214/266; ncol2=9; w=0; offset=3; strand=D; shift=12; score= 512.2; ------------rCACGTGC--- ; cor=0.834; Ncor=0.477; logoDP=6.838; NsEucl=0.893; NSW=0.909; rcor=330; rNcor=795; rlogoDP=166; rNsEucl=726; rNSW=544; rank_mean=512.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 295 53 992 1 15 4 1 38 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 116 945 2 952 1 4 2 696 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 569 1 3 1 982 1 987 65 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 20 1 4 46 1 991 10 201 0 0 0
bHLH104_M0159_1.02_CISBP_shift11 (bHLH104:M0159_1.02:CISBP)	0.799	0.571	7.981	0.892	0.884	506	462	47	740	811	513.200		; assembly_6 versus bHLH104_M0159_1.02_CISBP (bHLH104:M0159_1.02:CISBP); m=215/266; ncol2=11; w=0; offset=2; strand=D; shift=11; score= 513.2; -----------GGCACGTGCC-- ; cor=0.799; Ncor=0.571; logoDP=7.981; NsEucl=0.892; NSW=0.884; rcor=506; rNcor=462; rlogoDP=47; rNsEucl=740; rNSW=811; rank_mean=513.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 13 2 1 100 0 0 0 0 4 2 0 0 c 0 0 0 0 0 0 0 0 0 0 0 3 7 99 0 100 0 0 0 87 82 0 0 g 0 0 0 0 0 0 0 0 0 0 0 82 87 0 0 0 100 0 99 7 3 0 0 t 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 100 1 2 13 0 0
BZIP68_ZmABF2_B73_1_m1_EEAD0292_EEADannot_rc_shift11 (BZIP68_ZmABF2_B73_1_m1:EEAD0292:EEADannot_rc)	0.796	0.626	1.007	0.909	0.909	518	263	852	410	543	517.200		; assembly_6 versus BZIP68_ZmABF2_B73_1_m1_EEAD0292_EEADannot_rc (BZIP68_ZmABF2_B73_1_m1:EEAD0292:EEADannot_rc); m=216/266; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 517.2; -----------GCCACGTsabC- ; cor=0.796; Ncor=0.626; logoDP=1.007; NsEucl=0.909; NSW=0.909; rcor=518; rNcor=263; rlogoDP=852; rNsEucl=410; rNSW=543; rank_mean=517.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 18 0 99 0 2 1 4 58 9 9 0 c 0 0 0 0 0 0 0 0 0 0 0 0 82 100 1 93 10 1 59 2 31 77 0 g 0 0 0 0 0 0 0 0 0 0 0 90 0 0 0 0 88 0 36 16 26 8 0 t 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 7 0 98 1 24 34 6 0
BAM8.DAP_M0154_AthalianaCistrome_shift10 (BAM8.DAP:M0154:AthalianaCistrome)	0.727	0.591	7.427	0.907	0.888	900	386	95	442	777	520.000		; assembly_6 versus BAM8.DAP_M0154_AthalianaCistrome (BAM8.DAP:M0154:AthalianaCistrome); m=217/266; ncol2=8; w=0; offset=1; strand=D; shift=10; score= 520; ----------yCACACGT----- ; cor=0.727; Ncor=0.591; logoDP=7.427; NsEucl=0.907; NSW=0.888; rcor=900; rNcor=386; rlogoDP=95; rNsEucl=442; rNSW=777; rank_mean=520.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 34 19 417 0 599 2 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 206 499 37 599 0 598 0 10 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 5 42 139 0 1 0 600 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 355 40 7 1 0 0 0 590 0 0 0 0 0
BHLH106_ZmBIM2_Mo17_1_EEAD0208_EEADannot_rc_shift5 (BHLH106_ZmBIM2_Mo17_1:EEAD0208:EEADannot_rc)	0.817	0.500	0.747	0.917	0.924	412	716	899	261	366	530.800		; assembly_6 versus BHLH106_ZmBIM2_Mo17_1_EEAD0208_EEADannot_rc (BHLH106_ZmBIM2_Mo17_1:EEAD0208:EEADannot_rc); m=218/266; ncol2=22; w=-4; offset=-4; strand=R; shift=5; score= 530.8; -----ryGcvbskCACGTGm--- ; cor=0.817; Ncor=0.500; logoDP=0.747; NsEucl=0.917; NSW=0.924; rcor=412; rNcor=716; rlogoDP=899; rNsEucl=261; rNSW=366; rank_mean=530.800; match_rank= a 0 0 0 0 0 27 8 5 14 29 19 19 8 0 98 0 0 0 0 44 0 0 0 c 0 0 0 0 0 15 32 11 44 27 25 32 11 100 0 100 0 0 0 41 0 0 0 g 0 0 0 0 0 48 12 76 20 26 30 35 39 0 2 0 100 0 100 6 0 0 0 t 0 0 0 0 0 10 48 8 22 18 26 14 42 0 0 0 0 100 0 9 0 0 0
BZIP63_MA1745.2_JASPAR_shift12 (BZIP63:MA1745.2:JASPAR)	0.822	0.470	5.603	0.895	0.911	383	825	276	702	509	539.000		; assembly_6 versus BZIP63_MA1745.2_JASPAR (BZIP63:MA1745.2:JASPAR); m=219/266; ncol2=11; w=0; offset=3; strand=D; shift=12; score= 539; ------------tsACGTGg--- ; cor=0.822; Ncor=0.470; logoDP=5.603; NsEucl=0.895; NSW=0.911; rcor=383; rNcor=825; rlogoDP=276; rNsEucl=702; rNSW=509; rank_mean=539.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 166 0 1000 0 0 21 47 139 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 148 356 0 1000 0 21 123 62 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 21 644 0 0 1000 21 783 598 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 665 0 0 0 0 937 47 201 0 0 0
HBI1_MA1025.2_JASPAR_rc_shift13 (HBI1:MA1025.2:JASPAR_rc)	0.889	0.444	0.611	0.902	0.933	136	914	921	556	258	557.000		; assembly_6 versus HBI1_MA1025.2_JASPAR_rc (HBI1:MA1025.2:JASPAR_rc); m=220/266; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 557; -------------CACGTGC--- ; cor=0.889; Ncor=0.444; logoDP=0.611; NsEucl=0.902; NSW=0.933; rcor=136; rNcor=914; rlogoDP=921; rNsEucl=556; rNSW=258; rank_mean=557.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 21 936 0 95 0 0 108 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 936 21 1000 0 0 0 762 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 21 21 0 904 0 1000 106 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 21 21 0 0 1000 0 24 0 0 0
BZIP91_Mo17_1_EEAD0310_EEADannot_shift11 (BZIP91_Mo17_1:EEAD0310:EEADannot)	0.772	0.551	4.980	0.900	0.899	660	532	393	602	655	568.400		; assembly_6 versus BZIP91_Mo17_1_EEAD0310_EEADannot (BZIP91_Mo17_1:EEAD0310:EEADannot); m=221/266; ncol2=11; w=0; offset=2; strand=D; shift=11; score= 568.4; -----------gmCACGTCAy-- ; cor=0.772; Ncor=0.551; logoDP=4.980; NsEucl=0.900; NSW=0.899; rcor=660; rNcor=532; rlogoDP=393; rNsEucl=602; rNSW=655; rank_mean=568.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 10 40 0 90 0 6 0 5 71 10 0 0 c 0 0 0 0 0 0 0 0 0 0 0 17 54 97 0 93 3 6 75 4 40 0 0 g 0 0 0 0 0 0 0 0 0 0 0 56 4 0 8 2 90 2 20 23 9 0 0 t 0 0 0 0 0 0 0 0 0 0 0 17 2 3 2 5 1 92 0 2 41 0 0
GLYMA-08G357600_UN0420.2_JASPAR_shift14 (GLYMA-08G357600:UN0420.2:JASPAR)	0.850	0.425	4.420	0.893	0.920	262	980	459	724	418	568.600		; assembly_6 versus GLYMA-08G357600_UN0420.2_JASPAR (GLYMA-08G357600:UN0420.2:JASPAR); m=222/266; ncol2=11; w=0; offset=5; strand=D; shift=14; score= 568.6; --------------aCGTGTC-- ; cor=0.850; Ncor=0.425; logoDP=4.420; NsEucl=0.893; NSW=0.920; rcor=262; rNcor=980; rlogoDP=459; rNsEucl=724; rNSW=418; rank_mean=568.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3654 17 0 217 302 200 288 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 593 6396 1 547 191 134 6073 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1107 0 6412 124 5839 525 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1059 0 0 5525 81 5554 52 0 0
Carub.0004s2898.1.p_BZIP_1_AT2G46270_EEAD0611_EEADannot_rc_shift10 (Carub.0004s2898.1.p_BZIP_1_AT2G46270:EEAD0611:EEADannot_rc)	0.739	0.686	0.963	0.909	0.893	821	120	863	401	717	584.400		; assembly_6 versus Carub.0004s2898.1.p_BZIP_1_AT2G46270_EEAD0611_EEADannot_rc (Carub.0004s2898.1.p_BZIP_1_AT2G46270:EEAD0611:EEADannot_rc); m=223/266; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 584.4; ----------TKCCACGTCa--- ; cor=0.739; Ncor=0.686; logoDP=0.963; NsEucl=0.909; NSW=0.893; rcor=821; rNcor=120; rlogoDP=863; rNsEucl=401; rNSW=717; rank_mean=584.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 10 0 20 0 100 0 5 0 7 67 0 0 0 c 0 0 0 0 0 0 0 0 0 0 12 0 80 100 0 98 0 0 69 1 0 0 0 g 0 0 0 0 0 0 0 0 0 0 9 74 0 0 0 0 95 0 24 20 0 0 0 t 0 0 0 0 0 0 0 0 0 0 69 26 0 0 0 2 0 100 0 12 0 0 0
Solyc01g095460.3.1_BZIP_1_AT2G46270_EEAD0644_EEADannot_shift10 (Solyc01g095460.3.1_BZIP_1_AT2G46270:EEAD0644:EEADannot)	0.704	0.654	7.113	0.899	0.867	1065	182	134	619	957	591.400		; assembly_6 versus Solyc01g095460.3.1_BZIP_1_AT2G46270_EEAD0644_EEADannot (Solyc01g095460.3.1_BZIP_1_AT2G46270:EEAD0644:EEADannot); m=224/266; ncol2=11; w=0; offset=1; strand=D; shift=10; score= 591.4; ----------TGCCACGTCAk-- ; cor=0.704; Ncor=0.654; logoDP=7.113; NsEucl=0.899; NSW=0.867; rcor=1065; rNcor=182; rlogoDP=134; rNsEucl=619; rNSW=957; rank_mean=591.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 4 0 17 0 100 0 0 0 7 72 11 0 0 c 0 0 0 0 0 0 0 0 0 0 4 0 83 100 0 99 0 1 73 0 11 0 0 g 0 0 0 0 0 0 0 0 0 0 6 91 0 0 0 0 100 0 19 17 51 0 0 t 0 0 0 0 0 0 0 0 0 0 86 9 0 0 0 1 0 99 1 11 27 0 0
BHLH99_ZmJAM2_B73_1_m1_EEAD0236_EEADannot_shift4 (BHLH99_ZmJAM2_B73_1_m1:EEAD0236:EEADannot)	0.781	0.411	4.503	0.908	0.916	615	1036	448	420	465	596.800		; assembly_6 versus BHLH99_ZmJAM2_B73_1_m1_EEAD0236_EEADannot (BHLH99_ZmJAM2_B73_1_m1:EEAD0236:EEADannot); m=225/266; ncol2=10; w=-5; offset=-5; strand=D; shift=4; score= 596.8; ----cayrttwwaC--------- ; cor=0.781; Ncor=0.411; logoDP=4.503; NsEucl=0.908; NSW=0.916; rcor=615; rNcor=1036; rlogoDP=448; rNsEucl=420; rNSW=465; rank_mean=596.800; match_rank= a 0 0 0 0 23 59 2 43 24 11 26 55 54 24 0 0 0 0 0 0 0 0 0 c 0 0 0 0 59 8 49 6 8 0 4 8 16 76 0 0 0 0 0 0 0 0 0 g 0 0 0 0 7 13 1 43 1 24 12 6 12 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 11 20 48 8 67 65 58 31 18 0 0 0 0 0 0 0 0 0 0
HYH_MA1425.2_JASPAR_shift12 (HYH:MA1425.2:JASPAR)	0.827	0.414	5.740	0.886	0.908	356	1023	261	831	547	603.600		; assembly_6 versus HYH_MA1425.2_JASPAR (HYH:MA1425.2:JASPAR); m=226/266; ncol2=11; w=0; offset=3; strand=D; shift=12; score= 603.6; ------------wsACGTG---- ; cor=0.827; Ncor=0.414; logoDP=5.740; NsEucl=0.886; NSW=0.908; rcor=356; rNcor=1023; rlogoDP=261; rNsEucl=831; rNSW=547; rank_mean=603.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 283 23 999 0 0 0 48 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 72 350 0 999 0 0 154 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 72 523 0 0 999 0 747 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 571 102 0 0 0 999 48 0 0 0 0
BZIP2_DLF1_Mo17_1_EEAD0269_EEADannot_shift11 (BZIP2_DLF1_Mo17_1:EEAD0269:EEADannot)	0.738	0.580	6.819	0.893	0.873	828	427	168	732	912	613.400		; assembly_6 versus BZIP2_DLF1_Mo17_1_EEAD0269_EEADannot (BZIP2_DLF1_Mo17_1:EEAD0269:EEADannot); m=227/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 613.4; -----------GCCACGTCAy-- ; cor=0.738; Ncor=0.580; logoDP=6.819; NsEucl=0.893; NSW=0.873; rcor=828; rNcor=427; rlogoDP=168; rNsEucl=732; rNSW=912; rank_mean=613.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 1 20 0 100 0 4 0 3 79 5 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 80 100 0 99 6 0 79 0 38 0 0 g 0 0 0 0 0 0 0 0 0 0 0 94 0 0 0 0 90 0 18 8 19 0 0 t 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 1 0 100 0 13 38 0 0
Carub.0008s0285.1_BES1_1_AT5G45300_EEAD0619_EEADannot_shift11 (Carub.0008s0285.1_BES1_1_AT5G45300:EEAD0619:EEADannot)	0.733	0.576	6.959	0.893	0.874	869	439	154	725	899	617.200		; assembly_6 versus Carub.0008s0285.1_BES1_1_AT5G45300_EEAD0619_EEADannot (Carub.0008s0285.1_BES1_1_AT5G45300:EEAD0619:EEADannot); m=228/266; ncol2=8; w=0; offset=2; strand=D; shift=11; score= 617.2; -----------srCACGTG---- ; cor=0.733; Ncor=0.576; logoDP=6.959; NsEucl=0.893; NSW=0.874; rcor=869; rNcor=439; rlogoDP=154; rNsEucl=725; rNSW=899; rank_mean=617.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 55 2 94 0 0 1 1 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 50 1 94 0 100 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 38 37 0 6 0 99 0 99 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 6 7 4 0 0 1 99 0 0 0 0 0
BMY2_MA2375.1_JASPAR_shift11 (BMY2:MA2375.1:JASPAR)	0.729	0.573	7.445	0.892	0.871	887	452	92	746	926	620.600		; assembly_6 versus BMY2_MA2375.1_JASPAR (BMY2:MA2375.1:JASPAR); m=229/266; ncol2=11; w=0; offset=2; strand=D; shift=11; score= 620.6; -----------srCACGTGTGr- ; cor=0.729; Ncor=0.573; logoDP=7.445; NsEucl=0.892; NSW=0.871; rcor=887; rNcor=452; rlogoDP=92; rNsEucl=746; rNSW=926; rank_mean=620.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 45 525 3 983 0 0 0 1 11 66 591 0 c 0 0 0 0 0 0 0 0 0 0 0 413 20 975 0 1000 0 1 0 231 70 8 0 g 0 0 0 0 0 0 0 0 0 0 0 401 406 0 16 0 996 0 998 61 831 343 0 t 0 0 0 0 0 0 0 0 0 0 0 140 48 21 0 0 3 998 0 695 31 56 0
BAM8_MA2014.2_JASPAR_shift11 (BAM8:MA2014.2:JASPAR)	0.777	0.500	7.007	0.886	0.883	629	715	146	822	817	625.800		; assembly_6 versus BAM8_MA2014.2_JASPAR (BAM8:MA2014.2:JASPAR); m=230/266; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 625.8; -----------CACACGTGy--- ; cor=0.777; Ncor=0.500; logoDP=7.007; NsEucl=0.886; NSW=0.883; rcor=629; rNcor=715; rlogoDP=146; rNsEucl=822; rNSW=817; rank_mean=625.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 116 1383 6 1846 2 9 9 66 116 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 1278 101 1856 2 1862 1 31 1 1018 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 279 273 4 14 1 1863 5 1803 140 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 203 119 10 14 11 3 1831 6 602 0 0 0
AL8G13510.t2_BES1_1_AT5G45300_EEAD0597_EEADannot_shift11 (AL8G13510.t2_BES1_1_AT5G45300:EEAD0597:EEADannot)	0.730	0.573	7.184	0.892	0.871	882	449	129	753	931	628.800		; assembly_6 versus AL8G13510.t2_BES1_1_AT5G45300_EEAD0597_EEADannot (AL8G13510.t2_BES1_1_AT5G45300:EEAD0597:EEADannot); m=231/266; ncol2=8; w=0; offset=2; strand=D; shift=11; score= 628.8; -----------cACACGTG---- ; cor=0.730; Ncor=0.573; logoDP=7.184; NsEucl=0.892; NSW=0.871; rcor=882; rNcor=449; rlogoDP=129; rNsEucl=753; rNSW=931; rank_mean=628.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 4 81 0 97 1 0 1 4 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 66 1 100 0 99 0 1 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 21 16 0 3 0 100 0 96 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 98 0 0 0 0 0
BHLH99_ZmJAM2_Mo17_1_EEAD0237_EEADannot_shift4 (BHLH99_ZmJAM2_Mo17_1:EEAD0237:EEADannot)	0.768	0.404	5.238	0.904	0.908	678	1066	341	515	558	631.600		; assembly_6 versus BHLH99_ZmJAM2_Mo17_1_EEAD0237_EEADannot (BHLH99_ZmJAM2_Mo17_1:EEAD0237:EEADannot); m=232/266; ncol2=10; w=-5; offset=-5; strand=D; shift=4; score= 631.6; ----mayrwkwaAm--------- ; cor=0.768; Ncor=0.404; logoDP=5.238; NsEucl=0.904; NSW=0.908; rcor=678; rNcor=1066; rlogoDP=341; rNsEucl=515; rNSW=558; rank_mean=631.600; match_rank= a 0 0 0 0 30 64 9 52 29 14 33 65 69 35 0 0 0 0 0 0 0 0 0 c 0 0 0 0 54 8 44 2 5 3 4 5 12 65 0 0 0 0 0 0 0 0 0 g 0 0 0 0 3 9 7 38 1 31 9 6 8 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 13 19 40 8 65 52 54 24 11 0 0 0 0 0 0 0 0 0 0
BIM1_MA0964.3_JASPAR_shift12 (BIM1:MA0964.3:JASPAR)	0.802	0.458	7.286	0.880	0.885	495	856	111	894	803	631.800		; assembly_6 versus BIM1_MA0964.3_JASPAR (BIM1:MA0964.3:JASPAR); m=233/266; ncol2=8; w=0; offset=3; strand=D; shift=12; score= 631.8; ------------TCACGTGA--- ; cor=0.802; Ncor=0.458; logoDP=7.286; NsEucl=0.880; NSW=0.885; rcor=495; rNcor=856; rlogoDP=111; rNsEucl=894; rNSW=803; rank_mean=631.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 96 5 1380 1 11 7 3 1011 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 91 1377 1 1376 0 0 3 190 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 190 3 0 0 1376 1 1377 91 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 1011 3 7 11 1 1380 5 96 0 0 0
BIM1.ampDAP_M0165_AthalianaCistrome_rc_shift0 (BIM1.ampDAP:M0165:AthalianaCistrome_rc)	0.791	0.447	0.134	0.921	0.919	543	904	1079	208	430	632.800		; assembly_6 versus BIM1.ampDAP_M0165_AthalianaCistrome_rc (BIM1.ampDAP:M0165:AthalianaCistrome_rc); m=234/266; ncol2=8; w=-9; offset=-9; strand=R; shift=0; score= 632.8; rrcacrtr--------------- ; cor=0.791; Ncor=0.447; logoDP=0.134; NsEucl=0.921; NSW=0.919; rcor=543; rNcor=904; rlogoDP=1079; rNsEucl=208; rNSW=430; rank_mean=632.800; match_rank= a 179 155 139 279 93 149 108 150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 98 115 197 51 207 47 76 58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 158 162 119 120 134 267 124 278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 127 130 107 112 128 99 254 76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Zm00001d034298_MA1834.1_JASPAR_rc_shift11 (Zm00001d034298:MA1834.1:JASPAR_rc)	0.740	0.581	1.304	0.904	0.899	817	423	806	507	659	642.400		; assembly_6 versus Zm00001d034298_MA1834.1_JASPAR_rc (Zm00001d034298:MA1834.1:JASPAR_rc); m=235/266; ncol2=13; w=0; offset=2; strand=R; shift=11; score= 642.4; -----------ssCGCGTGGgs- ; cor=0.740; Ncor=0.581; logoDP=1.304; NsEucl=0.904; NSW=0.899; rcor=817; rNcor=423; rlogoDP=806; rNsEucl=507; rNSW=659; rank_mean=642.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 1276 1462 207 744 358 72 84 262 161 1494 1075 0 c 0 0 0 0 0 0 0 0 0 0 0 1777 1893 5681 401 5256 252 17 487 160 1597 2146 0 g 0 0 0 0 0 0 0 0 0 0 0 2323 1886 522 5039 489 6223 128 5812 6091 2040 2050 0 t 0 0 0 0 0 0 0 0 0 0 0 1226 1361 192 418 499 55 6373 41 190 1471 1331 0
BHLH17_B73_1_m1_EEAD0222_EEADannot_rc_shift12 (BHLH17_B73_1_m1:EEAD0222:EEADannot_rc)	0.791	0.452	6.591	0.883	0.890	541	884	188	862	761	647.200		; assembly_6 versus BHLH17_B73_1_m1_EEAD0222_EEADannot_rc (BHLH17_B73_1_m1:EEAD0222:EEADannot_rc); m=236/266; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 647.2; ------------sCATGTGc--- ; cor=0.791; Ncor=0.452; logoDP=6.591; NsEucl=0.883; NSW=0.890; rcor=541; rNcor=884; rlogoDP=188; rNsEucl=862; rNSW=761; rank_mean=647.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 20 0 100 0 0 0 0 24 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 50 100 0 24 0 0 0 61 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 100 0 98 11 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 76 0 100 2 4 0 0 0
BHLH149_MYC2A_B73_1_m1_EEAD0215_EEADannot_shift8 (BHLH149_MYC2A_B73_1_m1:EEAD0215:EEADannot)	0.738	0.492	5.513	0.896	0.893	824	744	293	664	722	649.400		; assembly_6 versus BHLH149_MYC2A_B73_1_m1_EEAD0215_EEADannot (BHLH149_MYC2A_B73_1_m1:EEAD0215:EEADannot); m=237/266; ncol2=8; w=-1; offset=-1; strand=D; shift=8; score= 649.4; --------wwwwaCAY------- ; cor=0.738; Ncor=0.492; logoDP=5.513; NsEucl=0.896; NSW=0.893; rcor=824; rNcor=744; rlogoDP=293; rNsEucl=664; rNSW=722; rank_mean=649.400; match_rank= a 0 0 0 0 0 0 0 0 34 32 46 59 59 14 100 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 2 3 6 10 15 86 0 30 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 13 4 4 18 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 64 52 44 27 8 0 0 70 0 0 0 0 0 0 0
BZIP99_Mo17_1_EEAD0318_EEADannot_shift10 (BZIP99_Mo17_1:EEAD0318:EEADannot)	0.723	0.568	4.452	0.898	0.886	917	471	457	633	791	653.800		; assembly_6 versus BZIP99_Mo17_1_EEAD0318_EEADannot (BZIP99_Mo17_1:EEAD0318:EEADannot); m=238/266; ncol2=15; w=0; offset=1; strand=D; shift=10; score= 653.8; ----------GmygACGTGGC-- ; cor=0.723; Ncor=0.568; logoDP=4.452; NsEucl=0.898; NSW=0.886; rcor=917; rNcor=471; rlogoDP=457; rNsEucl=633; rNSW=791; rank_mean=653.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 4 30 6 12 91 0 9 3 0 2 9 0 0 c 0 0 0 0 0 0 0 0 0 0 4 46 31 18 0 88 4 0 1 0 85 0 0 g 0 0 0 0 0 0 0 0 0 0 80 14 3 63 9 6 86 13 85 82 3 0 0 t 0 0 0 0 0 0 0 0 0 0 12 10 60 7 0 6 1 84 14 16 3 0 0
BZIP115_Mo17_1_EEAD0247_EEADannot_shift12 (BZIP115_Mo17_1:EEAD0247:EEADannot)	0.754	0.538	6.527	0.886	0.870	752	576	194	824	933	655.800		; assembly_6 versus BZIP115_Mo17_1_EEAD0247_EEADannot (BZIP115_Mo17_1:EEAD0247:EEADannot); m=239/266; ncol2=11; w=0; offset=3; strand=D; shift=12; score= 655.8; ------------TGACGTGGCA- ; cor=0.754; Ncor=0.538; logoDP=6.527; NsEucl=0.886; NSW=0.870; rcor=752; rNcor=576; rlogoDP=194; rNsEucl=824; rNSW=933; rank_mean=655.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 1 100 0 14 0 0 0 4 75 0 c 0 0 0 0 0 0 0 0 0 0 0 0 18 11 0 88 0 0 0 0 95 7 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 84 0 2 86 0 100 95 0 15 0 t 0 0 0 0 0 0 0 0 0 0 0 0 82 4 0 10 0 100 0 5 1 3 0
BZIP96_B73_1_m1_EEAD0315_EEADannot_shift10 (BZIP96_B73_1_m1:EEAD0315:EEADannot)	0.723	0.568	6.475	0.891	0.868	922	472	197	766	947	660.800		; assembly_6 versus BZIP96_B73_1_m1_EEAD0315_EEADannot (BZIP96_B73_1_m1:EEAD0315:EEADannot); m=240/266; ncol2=14; w=0; offset=1; strand=D; shift=10; score= 660.8; ----------GrTGACGTGGC-- ; cor=0.723; Ncor=0.568; logoDP=6.475; NsEucl=0.891; NSW=0.868; rcor=922; rNcor=472; rlogoDP=197; rNsEucl=766; rNSW=947; rank_mean=660.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 7 48 0 1 100 0 15 0 0 0 4 0 0 c 0 0 0 0 0 0 0 0 0 0 6 19 21 16 0 91 0 0 0 0 94 0 0 g 0 0 0 0 0 0 0 0 0 0 77 28 0 79 0 3 85 0 100 81 0 0 0 t 0 0 0 0 0 0 0 0 0 0 10 5 79 4 0 6 0 100 0 19 2 0 0
BEH3_MA1333.2_JASPAR_shift11 (BEH3:MA1333.2:JASPAR)	0.735	0.525	7.652	0.885	0.867	853	617	74	838	960	668.400		; assembly_6 versus BEH3_MA1333.2_JASPAR (BEH3:MA1333.2:JASPAR); m=241/266; ncol2=7; w=0; offset=2; strand=D; shift=11; score= 668.4; -----------yrCACGT----- ; cor=0.735; Ncor=0.525; logoDP=7.652; NsEucl=0.885; NSW=0.867; rcor=853; rNcor=617; rlogoDP=74; rNsEucl=838; rNSW=960; rank_mean=668.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 3 179 0 590 0 1 1 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 319 28 589 0 590 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 43 383 0 0 0 589 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 225 0 1 0 0 0 589 0 0 0 0 0
At4g18890.ampDAP_M0237_AthalianaCistrome_shift11 (At4g18890.ampDAP:M0237:AthalianaCistrome)	0.709	0.557	7.669	0.889	0.864	1033	513	73	794	980	678.600		; assembly_6 versus At4g18890.ampDAP_M0237_AthalianaCistrome (At4g18890.ampDAP:M0237:AthalianaCistrome); m=242/266; ncol2=8; w=0; offset=2; strand=D; shift=11; score= 678.6; -----------yRCACGTG---- ; cor=0.709; Ncor=0.557; logoDP=7.669; NsEucl=0.889; NSW=0.864; rcor=1033; rNcor=513; rlogoDP=73; rNsEucl=794; rNSW=980; rank_mean=678.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 83 0 304 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 156 1 303 0 304 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 26 220 0 0 0 304 0 304 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 116 0 1 0 0 0 304 0 0 0 0 0
LEC1-A_UN0423.1_JASPAR_rc_shift11 (LEC1-A:UN0423.1:JASPAR_rc)	0.727	0.519	5.994	0.890	0.879	899	644	230	777	852	680.400		; assembly_6 versus LEC1-A_UN0423.1_JASPAR_rc (LEC1-A:UN0423.1:JASPAR_rc); m=243/266; ncol2=11; w=0; offset=2; strand=R; shift=11; score= 680.4; -----------kmCACTTGth-- ; cor=0.727; Ncor=0.519; logoDP=5.994; NsEucl=0.890; NSW=0.879; rcor=899; rNcor=644; rlogoDP=230; rNsEucl=777; rNSW=852; rank_mean=680.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 1790 2983 0 7469 0 0 285 3 1189 2083 0 0 c 0 0 0 0 0 0 0 0 0 0 0 1436 2100 7613 0 7617 1 293 0 1564 2338 0 0 g 0 0 0 0 0 0 0 0 0 0 0 2225 1200 0 108 0 650 2 7614 1636 1271 0 0 t 0 0 0 0 0 0 0 0 0 0 0 2166 1334 4 40 0 6966 7037 0 3228 1925 0 0
BHLH17_Mo17_1_EEAD0223_EEADannot_shift12 (BHLH17_Mo17_1:EEAD0223:EEADannot)	0.780	0.446	6.709	0.879	0.882	616	907	180	904	831	687.600		; assembly_6 versus BHLH17_Mo17_1_EEAD0223_EEADannot (BHLH17_Mo17_1:EEAD0223:EEADannot); m=244/266; ncol2=10; w=0; offset=3; strand=D; shift=12; score= 687.6; ------------kCACATGs--- ; cor=0.780; Ncor=0.446; logoDP=6.709; NsEucl=0.879; NSW=0.882; rcor=616; rNcor=907; rlogoDP=180; rNsEucl=904; rNSW=831; rank_mean=687.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 3 0 100 0 76 0 0 3 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 5 100 0 100 0 0 0 25 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0 24 0 100 54 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 100 0 18 0 0 0
BZIP61_Mo17_1_EEAD0289_EEADannot_shift11 (BZIP61_Mo17_1:EEAD0289:EEADannot)	0.708	0.557	5.525	0.894	0.875	1038	515	290	714	889	689.200		; assembly_6 versus BZIP61_Mo17_1_EEAD0289_EEADannot (BZIP61_Mo17_1:EEAD0289:EEADannot); m=245/266; ncol2=11; w=0; offset=2; strand=D; shift=11; score= 689.2; -----------kcCACGTCryC- ; cor=0.708; Ncor=0.557; logoDP=5.525; NsEucl=0.894; NSW=0.875; rcor=1038; rNcor=515; rlogoDP=290; rNsEucl=714; rNSW=889; rank_mean=689.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 9 24 2 97 0 2 0 9 65 11 5 0 c 0 0 0 0 0 0 0 0 0 0 0 5 65 69 0 99 1 0 86 3 41 76 0 g 0 0 0 0 0 0 0 0 0 0 0 59 0 24 1 0 97 0 5 29 14 8 0 t 0 0 0 0 0 0 0 0 0 0 0 27 11 5 2 1 0 100 0 3 34 11 0
fgenesh1_pg.C_Chr_14.0001000151_M0253_1.02_CISBP_rc_shift11 (fgenesh1_pg.C_Chr_14.0001000151:M0253_1.02:CISBP_rc)	0.733	0.523	3.466	0.896	0.892	870	627	586	670	729	696.400		; assembly_6 versus fgenesh1_pg.C_Chr_14.0001000151_M0253_1.02_CISBP_rc (fgenesh1_pg.C_Chr_14.0001000151:M0253_1.02:CISBP_rc); m=246/266; ncol2=9; w=0; offset=2; strand=R; shift=11; score= 696.4; -----------gvCACryGy--- ; cor=0.733; Ncor=0.523; logoDP=3.466; NsEucl=0.896; NSW=0.892; rcor=870; rNcor=627; rlogoDP=586; rNsEucl=670; rNSW=729; rank_mean=696.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 24 36 4 88 1 34 10 8 10 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 18 27 95 1 92 1 57 4 56 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 40 30 0 9 4 64 6 77 8 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 18 7 1 2 3 1 27 11 26 0 0 0
XP_013613838.1_BES1_1_AT5G45300_EEAD0674_EEADannot_rc_shift13 (XP_013613838.1_BES1_1_AT5G45300:EEAD0674:EEADannot_rc)	0.811	0.463	3.622	0.882	0.888	448	842	568	875	775	701.600		; assembly_6 versus XP_013613838.1_BES1_1_AT5G45300_EEAD0674_EEADannot_rc (XP_013613838.1_BES1_1_AT5G45300:EEAD0674:EEADannot_rc); m=247/266; ncol2=9; w=0; offset=4; strand=R; shift=13; score= 701.6; -------------CACGTGTG-- ; cor=0.811; Ncor=0.463; logoDP=3.622; NsEucl=0.882; NSW=0.888; rcor=448; rNcor=842; rlogoDP=568; rNsEucl=875; rNSW=775; rank_mean=701.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 96 0 0 1 1 2 2 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 98 0 100 0 0 0 23 15 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 99 0 99 1 83 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 1 99 0 74 0 0 0
BZIP17_M0263_1.02_CISBP_rc_shift12 (BZIP17:M0263_1.02:CISBP_rc)	0.743	0.531	0.859	0.900	0.900	799	597	884	593	642	703.000		; assembly_6 versus BZIP17_M0263_1.02_CISBP_rc (BZIP17:M0263_1.02:CISBP_rc); m=248/266; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 703; ------------mcaCGTca--- ; cor=0.743; Ncor=0.531; logoDP=0.859; NsEucl=0.900; NSW=0.900; rcor=799; rNcor=597; rlogoDP=884; rNsEucl=593; rNSW=642; rank_mean=703.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 31 12 64 4 18 8 18 50 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 40 54 3 78 1 8 51 10 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 14 11 19 0 80 5 19 22 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 15 23 14 18 1 79 12 18 0 0 0
ABF3_M0267_1.02_CISBP_shift12 (ABF3:M0267_1.02:CISBP)	0.789	0.451	6.707	0.872	0.868	556	886	182	963	945	706.400		; assembly_6 versus ABF3_M0267_1.02_CISBP (ABF3:M0267_1.02:CISBP); m=249/266; ncol2=8; w=0; offset=3; strand=D; shift=12; score= 706.4; ------------ACACGTGT--- ; cor=0.789; Ncor=0.451; logoDP=6.707; NsEucl=0.872; NSW=0.868; rcor=556; rNcor=886; rlogoDP=182; rNsEucl=963; rNSW=945; rank_mean=706.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 97 1 97 1 1 1 1 1 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 1 97 1 97 1 1 1 1 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 97 1 97 1 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 97 1 97 0 0 0
ABF3_MA0930.1_JASPAR_shift12 (ABF3:MA0930.1:JASPAR)	0.789	0.451	6.708	0.872	0.868	556	886	181	964	946	706.600		; assembly_6 versus ABF3_MA0930.1_JASPAR (ABF3:MA0930.1:JASPAR); m=250/266; ncol2=8; w=0; offset=3; strand=D; shift=12; score= 706.6; ------------ACACGTGT--- ; cor=0.789; Ncor=0.451; logoDP=6.708; NsEucl=0.872; NSW=0.868; rcor=556; rNcor=886; rlogoDP=181; rNsEucl=964; rNSW=946; rank_mean=706.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 971 10 971 10 10 10 10 10 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 10 971 10 971 10 10 10 10 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 10 10 10 10 971 10 971 10 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 10 10 10 10 10 971 10 971 0 0 0
XP_013631386.1_BZIP_1_AT2G46270_EEAD0678_EEADannot_rc_shift9 (XP_013631386.1_BZIP_1_AT2G46270:EEAD0678:EEADannot_rc)	0.709	0.658	1.107	0.901	0.872	1035	174	836	577	918	708.000		; assembly_6 versus XP_013631386.1_BZIP_1_AT2G46270_EEAD0678_EEADannot_rc (XP_013631386.1_BZIP_1_AT2G46270:EEAD0678:EEADannot_rc); m=251/266; ncol2=; w=0; offset=0; strand=R; shift=9; score= 708; ----------------------- ; cor=0.709; Ncor=0.658; logoDP=1.107; NsEucl=0.901; NSW=0.872; rcor=1035; rNcor=174; rlogoDP=836; rNsEucl=577; rNSW=918; rank_mean=708.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
BZR1_EEAD0070_EEADannot_shift11 (BZR1:EEAD0070:EEADannot)	0.722	0.515	7.101	0.884	0.864	931	661	136	845	972	709.000		; assembly_6 versus BZR1_EEAD0070_EEADannot (BZR1:EEAD0070:EEADannot); m=252/266; ncol2=; w=0; offset=2; strand=D; shift=11; score= 709; ----------------------- ; cor=0.722; Ncor=0.515; logoDP=7.101; NsEucl=0.884; NSW=0.864; rcor=931; rNcor=661; rlogoDP=136; rNsEucl=845; rNSW=972; rank_mean=709.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
BZIP111_Mo17_1_EEAD0243_EEADannot_shift12 (BZIP111_Mo17_1:EEAD0243:EEADannot)	0.772	0.441	4.187	0.883	0.891	656	925	487	853	749	734.000		; assembly_6 versus BZIP111_Mo17_1_EEAD0243_EEADannot (BZIP111_Mo17_1:EEAD0243:EEADannot); m=253/266; ncol2=; w=0; offset=3; strand=D; shift=12; score= 734; ----------------------- ; cor=0.772; Ncor=0.441; logoDP=4.187; NsEucl=0.883; NSW=0.891; rcor=656; rNcor=925; rlogoDP=487; rNsEucl=853; rNSW=749; rank_mean=734.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
At1g78700.ampDAP_M0239_AthalianaCistrome_rc_shift7 (At1g78700.ampDAP:M0239:AthalianaCistrome_rc)	0.704	0.572	0.791	0.905	0.884	1066	454	890	482	812	740.800		; assembly_6 versus At1g78700.ampDAP_M0239_AthalianaCistrome_rc (At1g78700.ampDAP:M0239:AthalianaCistrome_rc); m=254/266; ncol2=; w=-2; offset=-2; strand=R; shift=7; score= 740.8; ----------------------- ; cor=0.704; Ncor=0.572; logoDP=0.791; NsEucl=0.905; NSW=0.884; rcor=1066; rNcor=454; rlogoDP=890; rNsEucl=482; rNSW=812; rank_mean=740.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
AT4G18890_MA1333.1_JASPAR_rc_shift10 (AT4G18890:MA1333.1:JASPAR_rc)	0.734	0.576	0.930	0.894	0.877	862	437	869	706	868	748.400		; assembly_6 versus AT4G18890_MA1333.1_JASPAR_rc (AT4G18890:MA1333.1:JASPAR_rc); m=255/266; ncol2=; w=0; offset=1; strand=R; shift=10; score= 748.4; ----------------------- ; cor=0.734; Ncor=0.576; logoDP=0.930; NsEucl=0.894; NSW=0.877; rcor=862; rNcor=437; rlogoDP=869; rNsEucl=706; rNSW=868; rank_mean=748.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
At4g21330_MA0580.1_JASPAR_shift6 (At4g21330:MA0580.1:JASPAR)	0.716	0.463	7.440	0.886	0.856	970	844	93	829	1020	751.200		; assembly_6 versus At4g21330_MA0580.1_JASPAR (At4g21330:MA0580.1:JASPAR); m=256/266; ncol2=; w=-3; offset=-3; strand=D; shift=6; score= 751.2; ----------------------- ; cor=0.716; Ncor=0.463; logoDP=7.440; NsEucl=0.886; NSW=0.856; rcor=970; rNcor=844; rlogoDP=93; rNsEucl=829; rNSW=1020; rank_mean=751.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Zm00001d034298_MA1834.2_JASPAR_rc_shift13 (Zm00001d034298:MA1834.2:JASPAR_rc)	0.814	0.407	1.295	0.881	0.901	425	1051	807	885	635	760.600		; assembly_6 versus Zm00001d034298_MA1834.2_JASPAR_rc (Zm00001d034298:MA1834.2:JASPAR_rc); m=257/266; ncol2=; w=0; offset=4; strand=R; shift=13; score= 760.6; ----------------------- ; cor=0.814; Ncor=0.407; logoDP=1.295; NsEucl=0.881; NSW=0.901; rcor=425; rNcor=1051; rlogoDP=807; rNsEucl=885; rNSW=635; rank_mean=760.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
MYC2_MYC2_Athamap_rc_shift14 (MYC2:MYC2:Athamap_rc)	0.838	0.479	0.260	0.881	0.886	313	787	1034	887	789	762.000		; assembly_6 versus MYC2_MYC2_Athamap_rc (MYC2:MYC2:Athamap_rc); m=258/266; ncol2=; w=0; offset=5; strand=R; shift=14; score= 762; ----------------------- ; cor=0.838; Ncor=0.479; logoDP=0.260; NsEucl=0.881; NSW=0.886; rcor=313; rNcor=787; rlogoDP=1034; rNsEucl=887; rNSW=789; rank_mean=762.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
BZIP12_BZIP12_Athamap_rc_shift10 (BZIP12:BZIP12:Athamap_rc)	0.751	0.590	0.820	0.889	0.864	770	389	888	790	974	762.200		; assembly_6 versus BZIP12_BZIP12_Athamap_rc (BZIP12:BZIP12:Athamap_rc); m=259/266; ncol2=; w=0; offset=1; strand=R; shift=10; score= 762.2; ----------------------- ; cor=0.751; Ncor=0.590; logoDP=0.820; NsEucl=0.889; NSW=0.864; rcor=770; rNcor=389; rlogoDP=888; rNsEucl=790; rNSW=974; rank_mean=762.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
OsbZIP42_MA2422.1_JASPAR_shift10 (OsbZIP42:MA2422.1:JASPAR)	0.711	0.508	5.278	0.883	0.864	1011	694	339	849	979	774.400		; assembly_6 versus OsbZIP42_MA2422.1_JASPAR (OsbZIP42:MA2422.1:JASPAR); m=260/266; ncol2=; w=0; offset=1; strand=D; shift=10; score= 774.4; ----------------------- ; cor=0.711; Ncor=0.508; logoDP=5.278; NsEucl=0.883; NSW=0.864; rcor=1011; rNcor=694; rlogoDP=339; rNsEucl=849; rNSW=979; rank_mean=774.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
bZIP3_1_EEAD0132_EEADannot_rc_shift11 (bZIP3_1:EEAD0132:EEADannot_rc)	0.716	0.562	0.985	0.889	0.866	972	499	860	781	965	815.400		; assembly_6 versus bZIP3_1_EEAD0132_EEADannot_rc (bZIP3_1:EEAD0132:EEADannot_rc); m=261/266; ncol2=; w=0; offset=2; strand=R; shift=11; score= 815.4; ----------------------- ; cor=0.716; Ncor=0.562; logoDP=0.985; NsEucl=0.889; NSW=0.866; rcor=972; rNcor=499; rlogoDP=860; rNsEucl=781; rNSW=965; rank_mean=815.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
bhlh112_M0229_1.02_CISBP_rc_shift12 (bhlh112:M0229_1.02:CISBP_rc)	0.738	0.475	3.486	0.877	0.864	827	806	583	913	981	822.000		; assembly_6 versus bhlh112_M0229_1.02_CISBP_rc (bhlh112:M0229_1.02:CISBP_rc); m=262/266; ncol2=; w=0; offset=3; strand=R; shift=12; score= 822; ----------------------- ; cor=0.738; Ncor=0.475; logoDP=3.486; NsEucl=0.877; NSW=0.864; rcor=827; rNcor=806; rlogoDP=583; rNsEucl=913; rNSW=981; rank_mean=822.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
BHLH112_MA0961.1_JASPAR_rc_shift12 (BHLH112:MA0961.1:JASPAR_rc)	0.738	0.474	3.484	0.877	0.863	831	811	584	916	984	825.200		; assembly_6 versus BHLH112_MA0961.1_JASPAR_rc (BHLH112:MA0961.1:JASPAR_rc); m=263/266; ncol2=; w=0; offset=3; strand=R; shift=12; score= 825.2; ----------------------- ; cor=0.738; Ncor=0.474; logoDP=3.484; NsEucl=0.877; NSW=0.863; rcor=831; rNcor=811; rlogoDP=584; rNsEucl=916; rNSW=984; rank_mean=825.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
AIB_MA0959.1_JASPAR_shift12 (AIB:MA0959.1:JASPAR)	0.732	0.418	5.963	0.862	0.848	874	1008	233	1020	1045	836.000		; assembly_6 versus AIB_MA0959.1_JASPAR (AIB:MA0959.1:JASPAR); m=264/266; ncol2=; w=0; offset=3; strand=D; shift=12; score= 836; ----------------------- ; cor=0.732; Ncor=0.418; logoDP=5.963; NsEucl=0.862; NSW=0.848; rcor=874; rNcor=1008; rlogoDP=233; rNsEucl=1020; rNSW=1045; rank_mean=836.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
AT5G48560_M0166_1.02_CISBP_shift12 (AT5G48560:M0166_1.02:CISBP)	0.721	0.412	6.506	0.853	0.828	937	1030	196	1051	1075	857.800		; assembly_6 versus AT5G48560_M0166_1.02_CISBP (AT5G48560:M0166_1.02:CISBP); m=265/266; ncol2=; w=0; offset=3; strand=D; shift=12; score= 857.8; ----------------------- ; cor=0.721; Ncor=0.412; logoDP=6.506; NsEucl=0.853; NSW=0.828; rcor=937; rNcor=1030; rlogoDP=196; rNsEucl=1051; rNSW=1075; rank_mean=857.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
BHLH78_MA0963.1_JASPAR_shift12 (BHLH78:MA0963.1:JASPAR)	0.721	0.412	6.507	0.853	0.828	937	1030	195	1052	1076	858.000		; assembly_6 versus BHLH78_MA0963.1_JASPAR (BHLH78:MA0963.1:JASPAR); m=266/266; ncol2=; w=0; offset=3; strand=D; shift=12; score= 858; ----------------------- ; cor=0.721; Ncor=0.412; logoDP=6.507; NsEucl=0.853; NSW=0.828; rcor=937; rNcor=1030; rlogoDP=195; rNsEucl=1052; rNSW=1076; rank_mean=858.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

One-to-n matrix alignment; reference matrix: assembly_8_shift0 ; 7 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
assembly_8_shift0 (assembly_8)
; assembly_8; m=0 (reference); ncol1=13; shift=0; ncol=13; wwaAGGCCCAwww ; Alignment reference a 259 321 445 662 129 28 47 21 39 771 465 270 291 c 165 118 84 41 6 10 701 748 711 6 69 113 132 g 117 89 86 23 630 716 18 1 13 3 38 102 91 t 249 262 175 64 25 36 24 20 27 10 218 305 276

ASR1_MA1812.1_JASPAR_shift0 (ASR1:MA1812.1:JASPAR) 0.965 0.836 7.257 0.967 0.986 33 12 115 14 25 39.800 3
; assembly_8 versus ASR1_MA1812.1_JASPAR (ASR1:MA1812.1:JASPAR); m=1/6; ncol2=15; w=0; offset=0; strand=D; shift=0; score= 39.8; wwyAGGCCCAAww ; cor=0.965; Ncor=0.836; logoDP=7.257; NsEucl=0.967; NSW=0.986; rcor=33; rNcor=12; rlogoDP=115; rNsEucl=14; rNSW=25; rank_mean=39.800; match_rank=3 a 53 42 33 124 20 1 0 0 0 149 111 41 69 c 36 34 51 10 1 0 153 156 155 1 6 14 19 g 19 35 24 5 135 155 0 0 0 6 7 7 14 t 48 45 48 17 0 0 3 0 1 0 32 94 54

ASR1_MA1812.2_JASPAR_shift3 (ASR1:MA1812.2:JASPAR) 0.989 0.685 7.247 0.971 0.992 12 124 117 8 11 54.400 7
; assembly_8 versus ASR1_MA1812.2_JASPAR (ASR1:MA1812.2:JASPAR); m=2/6; ncol2=9; w=0; offset=3; strand=D; shift=3; score= 54.4; ---AGGCCCAAw- ; cor=0.989; Ncor=0.685; logoDP=7.247; NsEucl=0.971; NSW=0.992; rcor=12; rNcor=124; rlogoDP=117; rNsEucl=8; rNSW=11; rank_mean=54.400; match_rank=7 a 0 0 0 124 20 1 0 0 0 149 111 41 0 c 0 0 0 10 1 0 153 156 155 1 6 14 0 g 0 0 0 5 135 155 0 0 0 6 7 7 0 t 0 0 0 17 0 0 3 0 1 0 32 94 0

TZP2_EEAD0062_EEADannot_rc_shift0 (TZP2:EEAD0062:EEADannot_rc) 0.926 0.802 0.223 0.956 0.975 70 22 1048 31 40 242.200
; assembly_8 versus TZP2_EEAD0062_EEADannot_rc (TZP2:EEAD0062:EEADannot_rc); m=3/6; ncol2=15; w=0; offset=0; strand=R; shift=0; score= 242.2; wwwarGCCCAwww ; cor=0.926; Ncor=0.802; logoDP=0.223; NsEucl=0.956; NSW=0.975; rcor=70; rNcor=22; rlogoDP=1048; rNsEucl=31; rNSW=40; rank_mean=242.200; match_rank= a 30 32 30 40 46 0 0 0 0 100 38 31 37 c 21 23 20 19 0 0 100 100 100 0 13 18 14 g 20 16 17 17 54 100 0 0 0 0 10 14 16 t 29 29 33 24 0 0 0 0 0 0 39 37 33

NLP7_EEAD0573_EEADannot_rc_shift2 (NLP7:EEAD0573:EEADannot_rc) 0.848 0.666 0.394 0.925 0.938 267 160 962 164 205 351.600
; assembly_8 versus NLP7_EEAD0573_EEADannot_rc (NLP7:EEAD0573:EEADannot_rc); m=4/6; ncol2=12; w=0; offset=2; strand=R; shift=2; score= 351.6; --AAAGCCCATTw ; cor=0.848; Ncor=0.666; logoDP=0.394; NsEucl=0.925; NSW=0.938; rcor=267; rNcor=160; rlogoDP=962; rNsEucl=164; rNSW=205; rank_mean=351.600; match_rank= a 0 0 3675 4332 4050 305 228 211 264 4727 943 748 1991 c 0 0 383 203 97 125 4555 4627 4541 101 357 352 683 g 0 0 351 226 766 4479 104 49 108 141 197 411 712 t 0 0 709 357 205 209 231 231 205 149 3621 3607 1732

TCP23_MA1066.1_JASPAR_shift3 (TCP23:MA1066.1:JASPAR) 0.705 0.434 6.167 0.851 0.823 1061 945 221 1056 1080 872.600
; assembly_8 versus TCP23_MA1066.1_JASPAR (TCP23:MA1066.1:JASPAR); m=5/6; ncol2=8; w=0; offset=3; strand=D; shift=3; score= 872.6; ---GGGCCCAC-- ; cor=0.705; Ncor=0.434; logoDP=6.167; NsEucl=0.851; NSW=0.823; rcor=1061; rNcor=945; rlogoDP=221; rNsEucl=1056; rNSW=1080; rank_mean=872.600; match_rank= a 0 0 0 5 10 37 7 4 12 954 10 0 0 c 0 0 0 3 5 88 971 984 980 10 959 0 0 g 0 0 0 966 980 835 8 8 3 31 11 0 0 t 0 0 0 26 5 41 13 4 6 5 21 0 0

OsI_MA1050.1_JASPAR_shift3 (OsI:MA1050.1:JASPAR) 0.700 0.431 5.507 0.856 0.835 1088 952 295 1038 1068 888.200
; assembly_8 versus OsI_MA1050.1_JASPAR (OsI:MA1050.1:JASPAR); m=6/6; ncol2=8; w=0; offset=3; strand=D; shift=3; score= 888.2; ---GGGCCCAC-- ; cor=0.700; Ncor=0.431; logoDP=5.507; NsEucl=0.856; NSW=0.835; rcor=1088; rNcor=952; rlogoDP=295; rNsEucl=1038; rNSW=1068; rank_mean=888.200; match_rank= a 0 0 0 1 46 91 0 0 0 899 1 0 0 c 0 0 0 1 0 91 863 999 999 50 855 0 0 g 0 0 0 946 953 726 46 0 0 50 72 0 0 t 0 0 0 53 0 91 91 0 0 0 72 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	match_rank	Aligned matrices
assembly_8_shift0 (assembly_8)													; assembly_8; m=0 (reference); ncol1=13; shift=0; ncol=13; wwaAGGCCCAwww ; Alignment reference a 259 321 445 662 129 28 47 21 39 771 465 270 291 c 165 118 84 41 6 10 701 748 711 6 69 113 132 g 117 89 86 23 630 716 18 1 13 3 38 102 91 t 249 262 175 64 25 36 24 20 27 10 218 305 276
ASR1_MA1812.1_JASPAR_shift0 (ASR1:MA1812.1:JASPAR)	0.965	0.836	7.257	0.967	0.986	33	12	115	14	25	39.800	3	; assembly_8 versus ASR1_MA1812.1_JASPAR (ASR1:MA1812.1:JASPAR); m=1/6; ncol2=15; w=0; offset=0; strand=D; shift=0; score= 39.8; wwyAGGCCCAAww ; cor=0.965; Ncor=0.836; logoDP=7.257; NsEucl=0.967; NSW=0.986; rcor=33; rNcor=12; rlogoDP=115; rNsEucl=14; rNSW=25; rank_mean=39.800; match_rank=3 a 53 42 33 124 20 1 0 0 0 149 111 41 69 c 36 34 51 10 1 0 153 156 155 1 6 14 19 g 19 35 24 5 135 155 0 0 0 6 7 7 14 t 48 45 48 17 0 0 3 0 1 0 32 94 54
ASR1_MA1812.2_JASPAR_shift3 (ASR1:MA1812.2:JASPAR)	0.989	0.685	7.247	0.971	0.992	12	124	117	8	11	54.400	7	; assembly_8 versus ASR1_MA1812.2_JASPAR (ASR1:MA1812.2:JASPAR); m=2/6; ncol2=9; w=0; offset=3; strand=D; shift=3; score= 54.4; ---AGGCCCAAw- ; cor=0.989; Ncor=0.685; logoDP=7.247; NsEucl=0.971; NSW=0.992; rcor=12; rNcor=124; rlogoDP=117; rNsEucl=8; rNSW=11; rank_mean=54.400; match_rank=7 a 0 0 0 124 20 1 0 0 0 149 111 41 0 c 0 0 0 10 1 0 153 156 155 1 6 14 0 g 0 0 0 5 135 155 0 0 0 6 7 7 0 t 0 0 0 17 0 0 3 0 1 0 32 94 0
TZP2_EEAD0062_EEADannot_rc_shift0 (TZP2:EEAD0062:EEADannot_rc)	0.926	0.802	0.223	0.956	0.975	70	22	1048	31	40	242.200		; assembly_8 versus TZP2_EEAD0062_EEADannot_rc (TZP2:EEAD0062:EEADannot_rc); m=3/6; ncol2=15; w=0; offset=0; strand=R; shift=0; score= 242.2; wwwarGCCCAwww ; cor=0.926; Ncor=0.802; logoDP=0.223; NsEucl=0.956; NSW=0.975; rcor=70; rNcor=22; rlogoDP=1048; rNsEucl=31; rNSW=40; rank_mean=242.200; match_rank= a 30 32 30 40 46 0 0 0 0 100 38 31 37 c 21 23 20 19 0 0 100 100 100 0 13 18 14 g 20 16 17 17 54 100 0 0 0 0 10 14 16 t 29 29 33 24 0 0 0 0 0 0 39 37 33
NLP7_EEAD0573_EEADannot_rc_shift2 (NLP7:EEAD0573:EEADannot_rc)	0.848	0.666	0.394	0.925	0.938	267	160	962	164	205	351.600		; assembly_8 versus NLP7_EEAD0573_EEADannot_rc (NLP7:EEAD0573:EEADannot_rc); m=4/6; ncol2=12; w=0; offset=2; strand=R; shift=2; score= 351.6; --AAAGCCCATTw ; cor=0.848; Ncor=0.666; logoDP=0.394; NsEucl=0.925; NSW=0.938; rcor=267; rNcor=160; rlogoDP=962; rNsEucl=164; rNSW=205; rank_mean=351.600; match_rank= a 0 0 3675 4332 4050 305 228 211 264 4727 943 748 1991 c 0 0 383 203 97 125 4555 4627 4541 101 357 352 683 g 0 0 351 226 766 4479 104 49 108 141 197 411 712 t 0 0 709 357 205 209 231 231 205 149 3621 3607 1732
TCP23_MA1066.1_JASPAR_shift3 (TCP23:MA1066.1:JASPAR)	0.705	0.434	6.167	0.851	0.823	1061	945	221	1056	1080	872.600		; assembly_8 versus TCP23_MA1066.1_JASPAR (TCP23:MA1066.1:JASPAR); m=5/6; ncol2=8; w=0; offset=3; strand=D; shift=3; score= 872.6; ---GGGCCCAC-- ; cor=0.705; Ncor=0.434; logoDP=6.167; NsEucl=0.851; NSW=0.823; rcor=1061; rNcor=945; rlogoDP=221; rNsEucl=1056; rNSW=1080; rank_mean=872.600; match_rank= a 0 0 0 5 10 37 7 4 12 954 10 0 0 c 0 0 0 3 5 88 971 984 980 10 959 0 0 g 0 0 0 966 980 835 8 8 3 31 11 0 0 t 0 0 0 26 5 41 13 4 6 5 21 0 0
OsI_MA1050.1_JASPAR_shift3 (OsI:MA1050.1:JASPAR)	0.700	0.431	5.507	0.856	0.835	1088	952	295	1038	1068	888.200		; assembly_8 versus OsI_MA1050.1_JASPAR (OsI:MA1050.1:JASPAR); m=6/6; ncol2=8; w=0; offset=3; strand=D; shift=3; score= 888.2; ---GGGCCCAC-- ; cor=0.700; Ncor=0.431; logoDP=5.507; NsEucl=0.856; NSW=0.835; rcor=1088; rNcor=952; rlogoDP=295; rNsEucl=1038; rNSW=1068; rank_mean=888.200; match_rank= a 0 0 0 1 46 91 0 0 0 899 1 0 0 c 0 0 0 1 0 91 863 999 999 50 855 0 0 g 0 0 0 946 953 726 46 0 0 50 72 0 0 t 0 0 0 53 0 91 91 0 0 0 72 0 0

One-to-n matrix alignment; reference matrix: assembly_1_shift0 ; 9 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
assembly_1_shift0 (assembly_1)
; assembly_1; m=0 (reference); ncol1=14; shift=0; ncol=14; wwwAGGCCCATtwa ; Alignment reference a 223 263 366 510 111 19 34 12 24 671 153 171 259 281 c 134 101 84 63 6 5 619 664 641 3 33 82 89 113 g 101 82 66 43 551 642 14 2 4 7 23 71 89 128 t 234 246 176 76 24 26 25 14 23 11 483 368 255 170

ASR1_MA1812.1_JASPAR_shift0 (ASR1:MA1812.1:JASPAR) 0.927 0.865 7.470 0.957 0.974 68 5 89 30 44 47.200 6
; assembly_1 versus ASR1_MA1812.1_JASPAR (ASR1:MA1812.1:JASPAR); m=1/8; ncol2=15; w=0; offset=0; strand=D; shift=0; score= 47.2; wwyAGGCCCAAwww ; cor=0.927; Ncor=0.865; logoDP=7.470; NsEucl=0.957; NSW=0.974; rcor=68; rNcor=5; rlogoDP=89; rNsEucl=30; rNSW=44; rank_mean=47.200; match_rank=6 a 53 42 33 124 20 1 0 0 0 149 111 41 69 59 c 36 34 51 10 1 0 153 156 155 1 6 14 19 21 g 19 35 24 5 135 155 0 0 0 6 7 7 14 34 t 48 45 48 17 0 0 3 0 1 0 32 94 54 42

ASR1_MA1812.2_JASPAR_shift3 (ASR1:MA1812.2:JASPAR) 0.946 0.608 7.458 0.943 0.970 46 312 90 65 53 113.200 26
; assembly_1 versus ASR1_MA1812.2_JASPAR (ASR1:MA1812.2:JASPAR); m=2/8; ncol2=9; w=0; offset=3; strand=D; shift=3; score= 113.2; ---AGGCCCAAw-- ; cor=0.946; Ncor=0.608; logoDP=7.458; NsEucl=0.943; NSW=0.970; rcor=46; rNcor=312; rlogoDP=90; rNsEucl=65; rNSW=53; rank_mean=113.200; match_rank=26 a 0 0 0 124 20 1 0 0 0 149 111 41 0 0 c 0 0 0 10 1 0 153 156 155 1 6 14 0 0 g 0 0 0 5 135 155 0 0 0 6 7 7 0 0 t 0 0 0 17 0 0 3 0 1 0 32 94 0 0

TZP2_EEAD0062_EEADannot_rc_shift0 (TZP2:EEAD0062:EEADannot_rc) 0.931 0.869 0.280 0.960 0.978 63 3 1018 25 36 229.000
; assembly_1 versus TZP2_EEAD0062_EEADannot_rc (TZP2:EEAD0062:EEADannot_rc); m=3/8; ncol2=15; w=0; offset=0; strand=R; shift=0; score= 229; wwwarGCCCAwwww ; cor=0.931; Ncor=0.869; logoDP=0.280; NsEucl=0.960; NSW=0.978; rcor=63; rNcor=3; rlogoDP=1018; rNsEucl=25; rNSW=36; rank_mean=229.000; match_rank= a 30 32 30 40 46 0 0 0 0 100 38 31 37 33 c 21 23 20 19 0 0 100 100 100 0 13 18 14 18 g 20 16 17 17 54 100 0 0 0 0 10 14 16 21 t 29 29 33 24 0 0 0 0 0 0 39 37 33 28

NLP7_EEAD0573_EEADannot_rc_shift2 (NLP7:EEAD0573:EEADannot_rc) 0.896 0.768 0.454 0.943 0.960 122 32 952 66 85 251.400
; assembly_1 versus NLP7_EEAD0573_EEADannot_rc (NLP7:EEAD0573:EEADannot_rc); m=4/8; ncol2=12; w=0; offset=2; strand=R; shift=2; score= 251.4; --AAAGCCCATTww ; cor=0.896; Ncor=0.768; logoDP=0.454; NsEucl=0.943; NSW=0.960; rcor=122; rNcor=32; rlogoDP=952; rNsEucl=66; rNSW=85; rank_mean=251.400; match_rank= a 0 0 3675 4332 4050 305 228 211 264 4727 943 748 1991 1854 c 0 0 383 203 97 125 4555 4627 4541 101 357 352 683 788 g 0 0 351 226 766 4479 104 49 108 141 197 411 712 944 t 0 0 709 357 205 209 231 231 205 149 3621 3607 1732 1532

OsI_MA1050.1_JASPAR_shift3 (OsI:MA1050.1:JASPAR) 0.713 0.407 5.777 0.859 0.841 992 1049 254 1030 1057 876.400
; assembly_1 versus OsI_MA1050.1_JASPAR (OsI:MA1050.1:JASPAR); m=5/8; ncol2=8; w=0; offset=3; strand=D; shift=3; score= 876.4; ---GGGCCCAC--- ; cor=0.713; Ncor=0.407; logoDP=5.777; NsEucl=0.859; NSW=0.841; rcor=992; rNcor=1049; rlogoDP=254; rNsEucl=1030; rNSW=1057; rank_mean=876.400; match_rank= a 0 0 0 1 46 91 0 0 0 899 1 0 0 0 c 0 0 0 1 0 91 863 999 999 50 855 0 0 0 g 0 0 0 946 953 726 46 0 0 50 72 0 0 0 t 0 0 0 53 0 91 91 0 0 0 72 0 0 0

TCP23_MA1066.1_JASPAR_shift3 (TCP23:MA1066.1:JASPAR) 0.711 0.406 6.426 0.852 0.826 1017 1056 203 1053 1077 881.200
; assembly_1 versus TCP23_MA1066.1_JASPAR (TCP23:MA1066.1:JASPAR); m=6/8; ncol2=8; w=0; offset=3; strand=D; shift=3; score= 881.2; ---GGGCCCAC--- ; cor=0.711; Ncor=0.406; logoDP=6.426; NsEucl=0.852; NSW=0.826; rcor=1017; rNcor=1056; rlogoDP=203; rNsEucl=1053; rNSW=1077; rank_mean=881.200; match_rank= a 0 0 0 5 10 37 7 4 12 954 10 0 0 0 c 0 0 0 3 5 88 971 984 980 10 959 0 0 0 g 0 0 0 966 980 835 8 8 3 31 11 0 0 0 t 0 0 0 26 5 41 13 4 6 5 21 0 0 0

OsI_08196_M1658_1.02_CISBP_shift3 (OsI_08196:M1658_1.02:CISBP) 0.711 0.406 5.766 0.858 0.840 1010 1053 256 1032 1059 882.000
; assembly_1 versus OsI_08196_M1658_1.02_CISBP (OsI_08196:M1658_1.02:CISBP); m=7/8; ncol2=8; w=0; offset=3; strand=D; shift=3; score= 882; ---GGGCCCAC--- ; cor=0.711; Ncor=0.406; logoDP=5.766; NsEucl=0.858; NSW=0.840; rcor=1010; rNcor=1053; rlogoDP=256; rNsEucl=1032; rNSW=1059; rank_mean=882.000; match_rank= a 0 0 0 0 5 9 0 0 0 90 0 0 0 0 c 0 0 0 0 0 9 86 100 100 5 86 0 0 0 g 0 0 0 95 95 73 5 0 0 5 7 0 0 0 t 0 0 0 5 0 9 9 0 0 0 7 0 0 0

TCP15_MA1062.1_JASPAR_shift3 (TCP15:MA1062.1:JASPAR) 0.700 0.400 6.298 0.850 0.821 1089 1089 207 1059 1082 905.200
; assembly_1 versus TCP15_MA1062.1_JASPAR (TCP15:MA1062.1:JASPAR); m=8/8; ncol2=8; w=0; offset=3; strand=D; shift=3; score= 905.2; ---GGGCCCAC--- ; cor=0.700; Ncor=0.400; logoDP=6.298; NsEucl=0.850; NSW=0.821; rcor=1089; rNcor=1089; rlogoDP=207; rNsEucl=1059; rNSW=1082; rank_mean=905.200; match_rank= a 0 0 0 6 5 60 8 2 3 949 6 0 0 0 c 0 0 0 2 3 138 950 990 986 12 962 0 0 0 g 0 0 0 978 989 771 6 1 2 36 20 0 0 0 t 0 0 0 14 2 30 36 7 9 3 12 0 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	match_rank	Aligned matrices
assembly_1_shift0 (assembly_1)													; assembly_1; m=0 (reference); ncol1=14; shift=0; ncol=14; wwwAGGCCCATtwa ; Alignment reference a 223 263 366 510 111 19 34 12 24 671 153 171 259 281 c 134 101 84 63 6 5 619 664 641 3 33 82 89 113 g 101 82 66 43 551 642 14 2 4 7 23 71 89 128 t 234 246 176 76 24 26 25 14 23 11 483 368 255 170
ASR1_MA1812.1_JASPAR_shift0 (ASR1:MA1812.1:JASPAR)	0.927	0.865	7.470	0.957	0.974	68	5	89	30	44	47.200	6	; assembly_1 versus ASR1_MA1812.1_JASPAR (ASR1:MA1812.1:JASPAR); m=1/8; ncol2=15; w=0; offset=0; strand=D; shift=0; score= 47.2; wwyAGGCCCAAwww ; cor=0.927; Ncor=0.865; logoDP=7.470; NsEucl=0.957; NSW=0.974; rcor=68; rNcor=5; rlogoDP=89; rNsEucl=30; rNSW=44; rank_mean=47.200; match_rank=6 a 53 42 33 124 20 1 0 0 0 149 111 41 69 59 c 36 34 51 10 1 0 153 156 155 1 6 14 19 21 g 19 35 24 5 135 155 0 0 0 6 7 7 14 34 t 48 45 48 17 0 0 3 0 1 0 32 94 54 42
ASR1_MA1812.2_JASPAR_shift3 (ASR1:MA1812.2:JASPAR)	0.946	0.608	7.458	0.943	0.970	46	312	90	65	53	113.200	26	; assembly_1 versus ASR1_MA1812.2_JASPAR (ASR1:MA1812.2:JASPAR); m=2/8; ncol2=9; w=0; offset=3; strand=D; shift=3; score= 113.2; ---AGGCCCAAw-- ; cor=0.946; Ncor=0.608; logoDP=7.458; NsEucl=0.943; NSW=0.970; rcor=46; rNcor=312; rlogoDP=90; rNsEucl=65; rNSW=53; rank_mean=113.200; match_rank=26 a 0 0 0 124 20 1 0 0 0 149 111 41 0 0 c 0 0 0 10 1 0 153 156 155 1 6 14 0 0 g 0 0 0 5 135 155 0 0 0 6 7 7 0 0 t 0 0 0 17 0 0 3 0 1 0 32 94 0 0
TZP2_EEAD0062_EEADannot_rc_shift0 (TZP2:EEAD0062:EEADannot_rc)	0.931	0.869	0.280	0.960	0.978	63	3	1018	25	36	229.000		; assembly_1 versus TZP2_EEAD0062_EEADannot_rc (TZP2:EEAD0062:EEADannot_rc); m=3/8; ncol2=15; w=0; offset=0; strand=R; shift=0; score= 229; wwwarGCCCAwwww ; cor=0.931; Ncor=0.869; logoDP=0.280; NsEucl=0.960; NSW=0.978; rcor=63; rNcor=3; rlogoDP=1018; rNsEucl=25; rNSW=36; rank_mean=229.000; match_rank= a 30 32 30 40 46 0 0 0 0 100 38 31 37 33 c 21 23 20 19 0 0 100 100 100 0 13 18 14 18 g 20 16 17 17 54 100 0 0 0 0 10 14 16 21 t 29 29 33 24 0 0 0 0 0 0 39 37 33 28
NLP7_EEAD0573_EEADannot_rc_shift2 (NLP7:EEAD0573:EEADannot_rc)	0.896	0.768	0.454	0.943	0.960	122	32	952	66	85	251.400		; assembly_1 versus NLP7_EEAD0573_EEADannot_rc (NLP7:EEAD0573:EEADannot_rc); m=4/8; ncol2=12; w=0; offset=2; strand=R; shift=2; score= 251.4; --AAAGCCCATTww ; cor=0.896; Ncor=0.768; logoDP=0.454; NsEucl=0.943; NSW=0.960; rcor=122; rNcor=32; rlogoDP=952; rNsEucl=66; rNSW=85; rank_mean=251.400; match_rank= a 0 0 3675 4332 4050 305 228 211 264 4727 943 748 1991 1854 c 0 0 383 203 97 125 4555 4627 4541 101 357 352 683 788 g 0 0 351 226 766 4479 104 49 108 141 197 411 712 944 t 0 0 709 357 205 209 231 231 205 149 3621 3607 1732 1532
OsI_MA1050.1_JASPAR_shift3 (OsI:MA1050.1:JASPAR)	0.713	0.407	5.777	0.859	0.841	992	1049	254	1030	1057	876.400		; assembly_1 versus OsI_MA1050.1_JASPAR (OsI:MA1050.1:JASPAR); m=5/8; ncol2=8; w=0; offset=3; strand=D; shift=3; score= 876.4; ---GGGCCCAC--- ; cor=0.713; Ncor=0.407; logoDP=5.777; NsEucl=0.859; NSW=0.841; rcor=992; rNcor=1049; rlogoDP=254; rNsEucl=1030; rNSW=1057; rank_mean=876.400; match_rank= a 0 0 0 1 46 91 0 0 0 899 1 0 0 0 c 0 0 0 1 0 91 863 999 999 50 855 0 0 0 g 0 0 0 946 953 726 46 0 0 50 72 0 0 0 t 0 0 0 53 0 91 91 0 0 0 72 0 0 0
TCP23_MA1066.1_JASPAR_shift3 (TCP23:MA1066.1:JASPAR)	0.711	0.406	6.426	0.852	0.826	1017	1056	203	1053	1077	881.200		; assembly_1 versus TCP23_MA1066.1_JASPAR (TCP23:MA1066.1:JASPAR); m=6/8; ncol2=8; w=0; offset=3; strand=D; shift=3; score= 881.2; ---GGGCCCAC--- ; cor=0.711; Ncor=0.406; logoDP=6.426; NsEucl=0.852; NSW=0.826; rcor=1017; rNcor=1056; rlogoDP=203; rNsEucl=1053; rNSW=1077; rank_mean=881.200; match_rank= a 0 0 0 5 10 37 7 4 12 954 10 0 0 0 c 0 0 0 3 5 88 971 984 980 10 959 0 0 0 g 0 0 0 966 980 835 8 8 3 31 11 0 0 0 t 0 0 0 26 5 41 13 4 6 5 21 0 0 0
OsI_08196_M1658_1.02_CISBP_shift3 (OsI_08196:M1658_1.02:CISBP)	0.711	0.406	5.766	0.858	0.840	1010	1053	256	1032	1059	882.000		; assembly_1 versus OsI_08196_M1658_1.02_CISBP (OsI_08196:M1658_1.02:CISBP); m=7/8; ncol2=8; w=0; offset=3; strand=D; shift=3; score= 882; ---GGGCCCAC--- ; cor=0.711; Ncor=0.406; logoDP=5.766; NsEucl=0.858; NSW=0.840; rcor=1010; rNcor=1053; rlogoDP=256; rNsEucl=1032; rNSW=1059; rank_mean=882.000; match_rank= a 0 0 0 0 5 9 0 0 0 90 0 0 0 0 c 0 0 0 0 0 9 86 100 100 5 86 0 0 0 g 0 0 0 95 95 73 5 0 0 5 7 0 0 0 t 0 0 0 5 0 9 9 0 0 0 7 0 0 0
TCP15_MA1062.1_JASPAR_shift3 (TCP15:MA1062.1:JASPAR)	0.700	0.400	6.298	0.850	0.821	1089	1089	207	1059	1082	905.200		; assembly_1 versus TCP15_MA1062.1_JASPAR (TCP15:MA1062.1:JASPAR); m=8/8; ncol2=8; w=0; offset=3; strand=D; shift=3; score= 905.2; ---GGGCCCAC--- ; cor=0.700; Ncor=0.400; logoDP=6.298; NsEucl=0.850; NSW=0.821; rcor=1089; rNcor=1089; rlogoDP=207; rNsEucl=1059; rNSW=1082; rank_mean=905.200; match_rank= a 0 0 0 6 5 60 8 2 3 949 6 0 0 0 c 0 0 0 2 3 138 950 990 986 12 962 0 0 0 g 0 0 0 978 989 771 6 1 2 36 20 0 0 0 t 0 0 0 14 2 30 36 7 9 3 12 0 0 0

One-to-n matrix alignment; reference matrix: assembly_19_shift6 ; 42 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
assembly_19_shift6 (assembly_19)
; assembly_19; m=0 (reference); ncol1=10; shift=6; ncol=16; ------wwCAAAGCww ; Alignment reference a 0 0 0 0 0 0 166 143 0 439 439 439 0 0 157 169 c 0 0 0 0 0 0 88 101 439 0 0 0 0 439 104 68 g 0 0 0 0 0 0 70 68 0 0 0 0 439 0 39 60 t 0 0 0 0 0 0 115 127 0 0 0 0 0 0 139 142

Dof2_MA0020.1_JASPAR_shift9 (Dof2:MA0020.1:JASPAR) 0.980 0.588 8.049 0.953 0.987 21 397 44 33 24 103.800 21
; assembly_19 versus Dof2_MA0020.1_JASPAR (Dof2:MA0020.1:JASPAR); m=1/41; ncol2=6; w=0; offset=3; strand=D; shift=9; score= 103.8; ---------AAAGcm- ; cor=0.980; Ncor=0.588; logoDP=8.049; NsEucl=0.953; NSW=0.987; rcor=21; rNcor=397; rlogoDP=44; rNsEucl=33; rNSW=24; rank_mean=103.800; match_rank=21 a 0 0 0 0 0 0 0 0 0 21 21 21 0 3 7 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 14 6 0 g 0 0 0 0 0 0 0 0 0 0 0 0 21 2 3 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0

Dof2_MA0020.2_JASPAR_shift9 (Dof2:MA0020.2:JASPAR) 0.981 0.491 8.048 0.945 0.985 18 748 45 50 27 177.600 50
; assembly_19 versus Dof2_MA0020.2_JASPAR (Dof2:MA0020.2:JASPAR); m=2/41; ncol2=5; w=0; offset=3; strand=D; shift=9; score= 177.6; ---------AAAGc-- ; cor=0.981; Ncor=0.491; logoDP=8.048; NsEucl=0.945; NSW=0.985; rcor=18; rNcor=748; rlogoDP=45; rNsEucl=50; rNSW=27; rank_mean=177.600; match_rank=50 a 0 0 0 0 0 0 0 0 0 21 21 21 0 3 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 21 2 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0

MNB1A_MA0053.1_JASPAR_shift9 (MNB1A:MA0053.1:JASPAR) 0.969 0.484 8.050 0.931 0.976 29 771 41 121 38 200.000
; assembly_19 versus MNB1A_MA0053.1_JASPAR (MNB1A:MA0053.1:JASPAR); m=3/41; ncol2=5; w=0; offset=3; strand=D; shift=9; score= 200; ---------AAAGc-- ; cor=0.969; Ncor=0.484; logoDP=8.050; NsEucl=0.931; NSW=0.976; rcor=29; rNcor=771; rlogoDP=41; rNsEucl=121; rNSW=38; rank_mean=200.000; match_rank= a 0 0 0 0 0 0 0 0 0 15 15 15 0 3 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0

PBF_MA0064.1_JASPAR_shift9 (PBF:MA0064.1:JASPAR) 0.960 0.480 7.962 0.923 0.970 34 778 48 185 54 219.800
; assembly_19 versus PBF_MA0064.1_JASPAR (PBF:MA0064.1:JASPAR); m=4/41; ncol2=5; w=0; offset=3; strand=D; shift=9; score= 219.8; ---------AAAGy-- ; cor=0.960; Ncor=0.480; logoDP=7.962; NsEucl=0.923; NSW=0.970; rcor=34; rNcor=778; rlogoDP=48; rNsEucl=185; rNSW=54; rank_mean=219.800; match_rank= a 0 0 0 0 0 0 0 0 0 16 16 16 0 1 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 16 1 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0

Dof3_MA0021.1_JASPAR_shift9 (Dof3:MA0021.1:JASPAR) 0.909 0.545 7.949 0.904 0.945 97 550 51 509 154 272.200
; assembly_19 versus Dof3_MA0021.1_JASPAR (Dof3:MA0021.1:JASPAR); m=5/41; ncol2=6; w=0; offset=3; strand=D; shift=9; score= 272.2; ---------AAAGyv- ; cor=0.909; Ncor=0.545; logoDP=7.949; NsEucl=0.904; NSW=0.945; rcor=97; rNcor=550; rlogoDP=51; rNsEucl=509; rNSW=154; rank_mean=272.200; match_rank= a 0 0 0 0 0 0 0 0 0 21 21 21 0 0 6 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 g 0 0 0 0 0 0 0 0 0 0 0 0 21 3 9 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0

dof43.DAP_M0281_AthalianaCistrome_shift9 (dof43.DAP:M0281:AthalianaCistrome) 0.877 0.438 7.187 0.904 0.935 162 931 127 511 237 393.600
; assembly_19 versus dof43.DAP_M0281_AthalianaCistrome (dof43.DAP:M0281:AthalianaCistrome); m=6/41; ncol2=11; w=0; offset=3; strand=D; shift=9; score= 393.6; ---------AAAGyya ; cor=0.877; Ncor=0.438; logoDP=7.187; NsEucl=0.904; NSW=0.935; rcor=162; rNcor=931; rlogoDP=127; rNsEucl=511; rNSW=237; rank_mean=393.600; match_rank= a 0 0 0 0 0 0 0 0 0 62 62 61 1 11 0 39 c 0 0 0 0 0 0 0 0 0 0 0 1 1 24 21 3 g 0 0 0 0 0 0 0 0 0 0 0 0 59 11 0 14 t 0 0 0 0 0 0 0 0 0 0 0 0 1 16 41 6

ChFLMrsat_EEAD0162_EEADannot_shift5 (ChFLMrsat:EEAD0162:EEADannot) 0.765 0.638 6.926 0.899 0.897 694 221 157 621 673 473.200
; assembly_19 versus ChFLMrsat_EEAD0162_EEADannot (ChFLMrsat:EEAD0162:EEADannot); m=7/41; ncol2=12; w=-1; offset=-1; strand=D; shift=5; score= 473.2; -----wwaCAAAACaw ; cor=0.765; Ncor=0.638; logoDP=6.926; NsEucl=0.899; NSW=0.897; rcor=694; rNcor=221; rlogoDP=157; rNsEucl=621; rNSW=673; rank_mean=473.200; match_rank= a 0 0 0 0 0 988 891 1709 6 2525 2491 2542 2536 6 1601 940 c 0 0 0 0 0 584 584 398 2628 105 103 83 62 2601 468 566 g 0 0 0 0 0 436 478 235 18 44 61 49 70 22 254 508 t 0 0 0 0 0 745 800 411 101 79 98 79 85 124 430 739

APETALA2a_EEAD0067_EEADannot_shift6 (APETALA2a:EEAD0067:EEADannot) 0.866 0.519 7.731 0.874 0.905 204 643 67 947 586 489.400
; assembly_19 versus APETALA2a_EEAD0067_EEADannot (APETALA2a:EEAD0067:EEADannot); m=8/41; ncol2=6; w=0; offset=0; strand=D; shift=6; score= 489.4; ------AACAAA---- ; cor=0.866; Ncor=0.519; logoDP=7.731; NsEucl=0.874; NSW=0.905; rcor=204; rNcor=643; rlogoDP=67; rNsEucl=947; rNSW=586; rank_mean=489.400; match_rank= a 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 0 c 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

e_gw1.170.52.1_M0659_1.02_CISBP_shift6 (e_gw1.170.52.1:M0659_1.02:CISBP) 0.737 0.737 3.865 0.896 0.892 840 56 534 671 731 566.400
; assembly_19 versus e_gw1.170.52.1_M0659_1.02_CISBP (e_gw1.170.52.1:M0659_1.02:CISBP); m=9/41; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 566.4; ------srwAAAGydr ; cor=0.737; Ncor=0.737; logoDP=3.865; NsEucl=0.896; NSW=0.892; rcor=840; rNcor=56; rlogoDP=534; rNsEucl=671; rNSW=731; rank_mean=566.400; match_rank= a 0 0 0 0 0 0 24 30 40 89 89 72 7 18 27 28 c 0 0 0 0 0 0 27 22 11 4 5 20 2 26 19 22 g 0 0 0 0 0 0 25 26 17 1 0 3 84 23 27 27 t 0 0 0 0 0 0 24 22 32 6 6 5 7 33 27 23

PHYPADRAFT_140773_MA0987.1_JASPAR_shift6 (PHYPADRAFT_140773:MA0987.1:JASPAR) 0.736 0.736 3.838 0.896 0.892 847 57 537 673 735 569.800
; assembly_19 versus PHYPADRAFT_140773_MA0987.1_JASPAR (PHYPADRAFT_140773:MA0987.1:JASPAR); m=10/41; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 569.8; ------srwAAAGydr ; cor=0.736; Ncor=0.736; logoDP=3.838; NsEucl=0.896; NSW=0.892; rcor=847; rNcor=57; rlogoDP=537; rNsEucl=673; rNSW=735; rank_mean=569.800; match_rank= a 0 0 0 0 0 0 243 302 396 888 892 715 72 182 271 280 c 0 0 0 0 0 0 266 215 111 43 46 205 22 258 193 218 g 0 0 0 0 0 0 253 260 173 10 1 28 839 229 271 272 t 0 0 0 0 0 0 238 222 321 60 61 52 67 331 265 229

DOF4.3_MA1747.2_JASPAR_rc_shift8 (DOF4.3:MA1747.2:JASPAR_rc) 0.812 0.433 7.759 0.889 0.901 438 949 63 791 632 574.600
; assembly_19 versus DOF4.3_MA1747.2_JASPAR_rc (DOF4.3:MA1747.2:JASPAR_rc); m=11/41; ncol2=13; w=0; offset=2; strand=R; shift=8; score= 574.6; --------wAAAGcyw ; cor=0.812; Ncor=0.433; logoDP=7.759; NsEucl=0.889; NSW=0.901; rcor=438; rNcor=949; rlogoDP=63; rNsEucl=791; rNSW=632; rank_mean=574.600; match_rank= a 0 0 0 0 0 0 0 0 424 998 998 995 2 95 76 429 c 0 0 0 0 0 0 0 0 103 0 0 0 0 571 345 91 g 0 0 0 0 0 0 0 0 66 2 0 5 995 147 2 178 t 0 0 0 0 0 0 0 0 407 0 2 0 3 188 578 302

dof43.ampDAP_M0253_AthalianaCistrome_shift8 (dof43.ampDAP:M0253:AthalianaCistrome) 0.812 0.406 7.780 0.889 0.901 437 1057 61 789 631 595.000
; assembly_19 versus dof43.ampDAP_M0253_AthalianaCistrome (dof43.ampDAP:M0253:AthalianaCistrome); m=12/41; ncol2=14; w=0; offset=2; strand=D; shift=8; score= 595; --------wAAAGcyw ; cor=0.812; Ncor=0.406; logoDP=7.780; NsEucl=0.889; NSW=0.901; rcor=437; rNcor=1057; rlogoDP=61; rNsEucl=789; rNSW=631; rank_mean=595.000; match_rank= a 0 0 0 0 0 0 0 0 246 579 579 577 1 55 44 249 c 0 0 0 0 0 0 0 0 60 0 0 0 0 331 200 53 g 0 0 0 0 0 0 0 0 38 1 0 3 577 85 1 103 t 0 0 0 0 0 0 0 0 236 0 1 0 2 109 335 175

MBD2_MA2370.1_JASPAR_shift11 (MBD2:MA2370.1:JASPAR) 0.831 0.416 3.390 0.877 0.924 346 1014 592 914 360 645.200
; assembly_19 versus MBD2_MA2370.1_JASPAR (MBD2:MA2370.1:JASPAR); m=13/41; ncol2=5; w=0; offset=5; strand=D; shift=11; score= 645.2; -----------AGCTr ; cor=0.831; Ncor=0.416; logoDP=3.390; NsEucl=0.877; NSW=0.924; rcor=346; rNcor=1014; rlogoDP=592; rNsEucl=914; rNSW=360; rank_mean=645.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 808 0 190 98 315 c 0 0 0 0 0 0 0 0 0 0 0 0 0 808 0 27 g 0 0 0 0 0 0 0 0 0 0 0 0 900 0 0 432 t 0 0 0 0 0 0 0 0 0 0 0 190 98 0 900 224

TREE1_MA1801.2_JASPAR_shift11 (TREE1:MA1801.2:JASPAR) 0.831 0.416 3.383 0.877 0.924 347 1015 595 915 361 646.600
; assembly_19 versus TREE1_MA1801.2_JASPAR (TREE1:MA1801.2:JASPAR); m=14/41; ncol2=5; w=0; offset=5; strand=D; shift=11; score= 646.6; -----------AGCTr ; cor=0.831; Ncor=0.416; logoDP=3.383; NsEucl=0.877; NSW=0.924; rcor=347; rNcor=1015; rlogoDP=595; rNsEucl=915; rNSW=361; rank_mean=646.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 809 0 191 99 316 c 0 0 0 0 0 0 0 0 0 0 0 0 0 809 0 27 g 0 0 0 0 0 0 0 0 0 0 0 0 901 0 0 433 t 0 0 0 0 0 0 0 0 0 0 0 191 99 0 901 224

AT1G64620_M0647_1.02_CISBP_shift6 (AT1G64620:M0647_1.02:CISBP) 0.712 0.712 3.143 0.892 0.883 1004 82 626 743 816 654.200
; assembly_19 versus AT1G64620_M0647_1.02_CISBP (AT1G64620:M0647_1.02:CISBP); m=15/41; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 654.2; ------vrwAAaGtdr ; cor=0.712; Ncor=0.712; logoDP=3.143; NsEucl=0.892; NSW=0.883; rcor=1004; rNcor=82; rlogoDP=626; rNsEucl=743; rNSW=816; rank_mean=654.200; match_rank= a 0 0 0 0 0 0 25 32 41 81 83 66 7 17 27 29 c 0 0 0 0 0 0 26 20 10 7 7 23 2 24 19 21 g 0 0 0 0 0 0 26 25 14 4 0 3 85 23 27 27 t 0 0 0 0 0 0 23 23 35 8 10 8 6 36 27 23

gw1.385.26.1_M0663_1.02_CISBP_shift6 (gw1.385.26.1:M0663_1.02:CISBP) 0.710 0.710 3.328 0.892 0.883 1026 93 600 742 815 655.200
; assembly_19 versus gw1.385.26.1_M0663_1.02_CISBP (gw1.385.26.1:M0663_1.02:CISBP); m=16/41; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 655.2; ------vrwAAaGydm ; cor=0.710; Ncor=0.710; logoDP=3.328; NsEucl=0.892; NSW=0.883; rcor=1026; rNcor=93; rlogoDP=600; rNsEucl=742; rNSW=815; rank_mean=655.200; match_rank= a 0 0 0 0 0 0 25 34 46 83 86 64 6 15 26 28 c 0 0 0 0 0 0 26 19 9 7 6 22 3 27 17 26 g 0 0 0 0 0 0 26 25 13 2 0 5 86 21 31 23 t 0 0 0 0 0 0 23 22 32 8 8 9 5 37 26 23

DOF1.8_MA0981.1_JASPAR_shift6 (DOF1.8:MA0981.1:JASPAR) 0.711 0.711 3.127 0.892 0.883 1008 85 627 744 818 656.400
; assembly_19 versus DOF1.8_MA0981.1_JASPAR (DOF1.8:MA0981.1:JASPAR); m=17/41; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 656.4; ------vawAAaGtdr ; cor=0.711; Ncor=0.711; logoDP=3.127; NsEucl=0.892; NSW=0.883; rcor=1008; rNcor=85; rlogoDP=627; rNsEucl=744; rNSW=818; rank_mean=656.400; match_rank= a 0 0 0 0 0 0 251 321 415 812 831 658 65 170 268 288 c 0 0 0 0 0 0 259 197 100 72 64 233 23 241 189 209 g 0 0 0 0 0 0 256 250 135 38 3 27 846 231 270 269 t 0 0 0 0 0 0 234 233 350 77 102 83 65 359 273 234

PHYPADRAFT_38837_MA1022.1_JASPAR_shift6 (PHYPADRAFT_38837:MA1022.1:JASPAR) 0.707 0.707 3.292 0.892 0.883 1043 98 608 748 822 663.800
; assembly_19 versus PHYPADRAFT_38837_MA1022.1_JASPAR (PHYPADRAFT_38837:MA1022.1:JASPAR); m=18/41; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 663.8; ------vrwAAaGydm ; cor=0.707; Ncor=0.707; logoDP=3.292; NsEucl=0.892; NSW=0.883; rcor=1043; rNcor=98; rlogoDP=608; rNsEucl=748; rNSW=822; rank_mean=663.800; match_rank= a 0 0 0 0 0 0 251 343 463 828 855 644 61 150 259 283 c 0 0 0 0 0 0 264 186 85 68 62 216 27 269 174 262 g 0 0 0 0 0 0 257 254 129 24 1 54 860 207 307 227 t 0 0 0 0 0 0 228 217 323 81 82 86 52 374 259 227

DOF5.3_MA1071.1_JASPAR_shift6 (DOF5.3:MA1071.1:JASPAR) 0.791 0.554 3.040 0.877 0.893 540 524 635 923 713 667.000
; assembly_19 versus DOF5.3_MA1071.1_JASPAR (DOF5.3:MA1071.1:JASPAR); m=19/41; ncol2=7; w=0; offset=0; strand=D; shift=6; score= 667; ------gawAAmG--- ; cor=0.791; Ncor=0.554; logoDP=3.040; NsEucl=0.877; NSW=0.893; rcor=540; rNcor=524; rlogoDP=635; rNsEucl=923; rNSW=713; rank_mean=667.000; match_rank= a 0 0 0 0 0 0 247 327 396 842 850 611 66 0 0 0 c 0 0 0 0 0 0 247 213 128 61 79 329 52 0 0 0 g 0 0 0 0 0 0 262 228 146 17 0 14 767 0 0 0 t 0 0 0 0 0 0 244 233 331 81 70 47 116 0 0 0

TMO6_M0654_1.02_CISBP_shift6 (TMO6:M0654_1.02:CISBP) 0.791 0.554 3.016 0.876 0.893 545 525 639 925 718 670.400
; assembly_19 versus TMO6_M0654_1.02_CISBP (TMO6:M0654_1.02:CISBP); m=20/41; ncol2=7; w=0; offset=0; strand=D; shift=6; score= 670.4; ------vawAAmG--- ; cor=0.791; Ncor=0.554; logoDP=3.016; NsEucl=0.876; NSW=0.893; rcor=545; rNcor=525; rlogoDP=639; rNsEucl=925; rNSW=718; rank_mean=670.400; match_rank= a 0 0 0 0 0 0 25 33 40 84 85 61 7 0 0 0 c 0 0 0 0 0 0 25 21 13 6 8 33 5 0 0 0 g 0 0 0 0 0 0 26 23 14 2 0 1 76 0 0 0 t 0 0 0 0 0 0 24 23 33 8 7 5 12 0 0 0

PHYPADRAFT_153324_MA0989.1_JASPAR_shift6 (PHYPADRAFT_153324:MA0989.1:JASPAR) 0.718 0.646 4.045 0.883 0.876 958 203 512 861 880 682.800
; assembly_19 versus PHYPADRAFT_153324_MA0989.1_JASPAR (PHYPADRAFT_153324:MA0989.1:JASPAR); m=21/41; ncol2=9; w=0; offset=0; strand=D; shift=6; score= 682.8; ------vrwAAaGyd- ; cor=0.718; Ncor=0.646; logoDP=4.045; NsEucl=0.883; NSW=0.876; rcor=958; rNcor=203; rlogoDP=512; rNsEucl=861; rNSW=880; rank_mean=682.800; match_rank= a 0 0 0 0 0 0 253 334 482 861 926 672 71 139 285 0 c 0 0 0 0 0 0 264 193 71 62 36 147 27 288 158 0 g 0 0 0 0 0 0 261 255 118 13 0 52 898 195 297 0 t 0 0 0 0 0 0 222 218 330 65 38 129 5 378 260 0

Lysine-specific_6jnl_A_3D-footprint_shift7 (Lysine-specific:6jnl_A:3D-footprint) 0.790 0.474 7.064 0.856 0.875 552 813 139 1041 888 686.600
; assembly_19 versus Lysine-specific_6jnl_A_3D-footprint (Lysine-specific:6jnl_A:3D-footprint); m=22/41; ncol2=6; w=0; offset=1; strand=D; shift=7; score= 686.6; -------aCAGAG--- ; cor=0.790; Ncor=0.474; logoDP=7.064; NsEucl=0.856; NSW=0.875; rcor=552; rNcor=813; rlogoDP=139; rNsEucl=1041; rNSW=888; rank_mean=686.600; match_rank= a 0 0 0 0 0 0 0 48 0 96 16 96 0 0 0 0 c 0 0 0 0 0 0 0 16 80 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 16 0 0 80 0 96 0 0 0 t 0 0 0 0 0 0 0 16 16 0 0 0 0 0 0 0

Lysine-specific_6jnm_A_3D-footprint_rc_shift6 (Lysine-specific:6jnm_A:3D-footprint_rc) 0.815 0.570 0.054 0.883 0.904 423 463 1086 859 604 687.000
; assembly_19 versus Lysine-specific_6jnm_A_3D-footprint_rc (Lysine-specific:6jnm_A:3D-footprint_rc); m=23/41; ncol2=7; w=0; offset=0; strand=R; shift=6; score= 687; ------aACAnAG--- ; cor=0.815; Ncor=0.570; logoDP=0.054; NsEucl=0.883; NSW=0.904; rcor=423; rNcor=463; rlogoDP=1086; rNsEucl=859; rNSW=604; rank_mean=687.000; match_rank= a 0 0 0 0 0 0 38 93 0 96 24 81 0 0 0 0 c 0 0 0 0 0 0 19 1 96 0 24 4 0 0 0 0 g 0 0 0 0 0 0 19 1 0 0 24 4 96 0 0 0 t 0 0 0 0 0 0 20 1 0 0 24 7 0 0 0 0

e_gw1.392.16.1_M0660_1.02_CISBP_shift6 (e_gw1.392.16.1:M0660_1.02:CISBP) 0.717 0.645 4.033 0.882 0.876 966 206 514 865 885 687.200
; assembly_19 versus e_gw1.392.16.1_M0660_1.02_CISBP (e_gw1.392.16.1:M0660_1.02:CISBP); m=24/41; ncol2=9; w=0; offset=0; strand=D; shift=6; score= 687.2; ------vrwAAaGyd- ; cor=0.717; Ncor=0.645; logoDP=4.033; NsEucl=0.882; NSW=0.876; rcor=966; rNcor=206; rlogoDP=514; rNsEucl=865; rNSW=885; rank_mean=687.200; match_rank= a 0 0 0 0 0 0 25 33 48 86 92 67 7 13 28 0 c 0 0 0 0 0 0 26 19 7 6 4 15 3 29 16 0 g 0 0 0 0 0 0 27 26 12 2 0 5 90 20 30 0 t 0 0 0 0 0 0 22 22 33 6 4 13 0 38 26 0

DOF4.3_MA1747.1_JASPAR_rc_shift8 (DOF4.3:MA1747.1:JASPAR_rc) 0.812 0.406 4.014 0.889 0.901 441 1058 515 792 633 687.800
; assembly_19 versus DOF4.3_MA1747.1_JASPAR_rc (DOF4.3:MA1747.1:JASPAR_rc); m=25/41; ncol2=14; w=0; offset=2; strand=R; shift=8; score= 687.8; --------wAAAGcyw ; cor=0.812; Ncor=0.406; logoDP=4.014; NsEucl=0.889; NSW=0.901; rcor=441; rNcor=1058; rlogoDP=515; rNsEucl=792; rNSW=633; rank_mean=687.800; match_rank= a 0 0 0 0 0 0 0 0 424 998 998 995 1.724 94.828 75.862 429.31 c 0 0 0 0 0 0 0 0 103 0 0 0 0 570.69 345 91.379 g 0 0 0 0 0 0 0 0 65.517 1.724 0 5.172 995 147 1.724 178 t 0 0 0 0 0 0 0 0 407 0 1.724 0 3.448 188 578 302

NAC007_MA2044.2_JASPAR_shift9 (NAC007:MA2044.2:JASPAR) 0.743 0.520 6.296 0.857 0.856 800 638 208 1037 1022 741.000
; assembly_19 versus NAC007_MA2044.2_JASPAR (NAC007:MA2044.2:JASPAR); m=26/41; ncol2=7; w=0; offset=3; strand=D; shift=9; score= 741; ---------cAAGCAA ; cor=0.743; Ncor=0.520; logoDP=6.296; NsEucl=0.857; NSW=0.856; rcor=800; rNcor=638; rlogoDP=208; rNsEucl=1037; rNSW=1022; rank_mean=741.000; match_rank= a 0 0 0 0 0 0 0 0 0 285 2117 1962 4 3 1974 2067 c 0 0 0 0 0 0 0 0 0 1236 13 161 7 2037 60 15 g 0 0 0 0 0 0 0 0 0 361 19 11 2144 9 40 13 t 0 0 0 0 0 0 0 0 0 291 24 39 18 124 99 78

NAC076_MA2036.2_JASPAR_shift9 (NAC076:MA2036.2:JASPAR) 0.741 0.518 6.280 0.856 0.854 811 650 212 1043 1028 748.800
; assembly_19 versus NAC076_MA2036.2_JASPAR (NAC076:MA2036.2:JASPAR); m=27/41; ncol2=7; w=0; offset=3; strand=D; shift=9; score= 748.8; ---------cAAGCAA ; cor=0.741; Ncor=0.518; logoDP=6.280; NsEucl=0.856; NSW=0.854; rcor=811; rNcor=650; rlogoDP=212; rNsEucl=1043; rNSW=1028; rank_mean=748.800; match_rank= a 0 0 0 0 0 0 0 0 0 408 3171 2963 7 16 2965 3088 c 0 0 0 0 0 0 0 0 0 1879 22 216 18 3023 81 19 g 0 0 0 0 0 0 0 0 0 539 20 16 3193 23 55 17 t 0 0 0 0 0 0 0 0 0 421 34 52 29 185 146 123

SMB_MA2010.2_JASPAR_shift9 (SMB:MA2010.2:JASPAR) 0.737 0.516 6.071 0.855 0.854 841 658 226 1046 1030 760.200
; assembly_19 versus SMB_MA2010.2_JASPAR (SMB:MA2010.2:JASPAR); m=28/41; ncol2=7; w=0; offset=3; strand=D; shift=9; score= 760.2; ---------cAAGCAA ; cor=0.737; Ncor=0.516; logoDP=6.071; NsEucl=0.855; NSW=0.854; rcor=841; rNcor=658; rlogoDP=226; rNsEucl=1046; rNSW=1030; rank_mean=760.200; match_rank= a 0 0 0 0 0 0 0 0 0 418 3480 3246 6 8 3245 3387 c 0 0 0 0 0 0 0 0 0 2165 45 251 21 3329 115 33 g 0 0 0 0 0 0 0 0 0 553 35 25 3530 33 64 29 t 0 0 0 0 0 0 0 0 0 466 42 80 45 232 178 153

DOF5.6_MA0983.1_JASPAR_shift6 (DOF5.6:MA0983.1:JASPAR) 0.705 0.564 4.477 0.866 0.857 1060 484 450 990 1013 799.400
; assembly_19 versus DOF5.6_MA0983.1_JASPAR (DOF5.6:MA0983.1:JASPAR); m=29/41; ncol2=8; w=0; offset=0; strand=D; shift=6; score= 799.4; ------vawAAmGt-- ; cor=0.705; Ncor=0.564; logoDP=4.477; NsEucl=0.866; NSW=0.857; rcor=1060; rNcor=484; rlogoDP=450; rNsEucl=990; rNSW=1013; rank_mean=799.400; match_rank= a 0 0 0 0 0 0 254 364 432 955 928 613 50 152 0 0 c 0 0 0 0 0 0 257 170 84 35 40 308 28 247 0 0 g 0 0 0 0 0 0 262 227 108 1 1 56 884 213 0 0 t 0 0 0 0 0 0 228 239 376 10 32 24 38 388 0 0

DOF5.6_M0657_1.02_CISBP_shift6 (DOF5.6:M0657_1.02:CISBP) 0.703 0.563 4.462 0.866 0.856 1071 494 454 994 1018 806.200
; assembly_19 versus DOF5.6_M0657_1.02_CISBP (DOF5.6:M0657_1.02:CISBP); m=30/41; ncol2=8; w=0; offset=0; strand=D; shift=6; score= 806.2; ------vawAAmGy-- ; cor=0.703; Ncor=0.563; logoDP=4.462; NsEucl=0.866; NSW=0.856; rcor=1071; rNcor=494; rlogoDP=454; rNsEucl=994; rNSW=1018; rank_mean=806.200; match_rank= a 0 0 0 0 0 0 25 36 43 95 93 61 5 15 0 0 c 0 0 0 0 0 0 26 17 8 4 4 31 3 25 0 0 g 0 0 0 0 0 0 26 23 11 0 0 6 88 21 0 0 t 0 0 0 0 0 0 23 24 38 1 3 2 4 39 0 0

NAC101_MA2050.2_JASPAR_shift9 (NAC101:MA2050.2:JASPAR) 0.716 0.501 5.869 0.849 0.840 973 710 243 1062 1058 809.200
; assembly_19 versus NAC101_MA2050.2_JASPAR (NAC101:MA2050.2:JASPAR); m=31/41; ncol2=7; w=0; offset=3; strand=D; shift=9; score= 809.2; ---------CAAGCAA ; cor=0.716; Ncor=0.501; logoDP=5.869; NsEucl=0.849; NSW=0.840; rcor=973; rNcor=710; rlogoDP=243; rNsEucl=1062; rNSW=1058; rank_mean=809.200; match_rank= a 0 0 0 0 0 0 0 0 0 248 2593 2461 32 82 2449 2513 c 0 0 0 0 0 0 0 0 0 1815 11 145 35 2318 56 14 g 0 0 0 0 0 0 0 0 0 253 17 7 2538 57 42 14 t 0 0 0 0 0 0 0 0 0 333 28 36 44 192 102 108

NAC91_NUT1_B73_1_m1_EEAD0491_EEADannot_shift0 (NAC91_NUT1_B73_1_m1:EEAD0491:EEADannot) 0.720 0.405 5.123 0.883 0.877 944 1062 359 851 869 817.000
; assembly_19 versus NAC91_NUT1_B73_1_m1_EEAD0491_EEADannot (NAC91_NUT1_B73_1_m1:EEAD0491:EEADannot); m=32/41; ncol2=15; w=-6; offset=-6; strand=D; shift=0; score= 817; MkTrvartbsAAGCa- ; cor=0.720; Ncor=0.405; logoDP=5.123; NsEucl=0.883; NSW=0.877; rcor=944; rNcor=1062; rlogoDP=359; rNsEucl=851; rNSW=869; rank_mean=817.000; match_rank= a 26 0 0 35 26 50 31 23 15 9 98 76 0 0 60 0 c 72 0 0 14 26 19 24 19 30 29 2 24 0 69 19 0 g 0 55 0 42 29 19 29 20 25 44 0 0 100 14 6 0 t 2 45 100 9 19 12 16 38 30 18 0 0 0 17 15 0

WRKY18_WRKY18_Athamap_shift5 (WRKY18:WRKY18:Athamap) 0.719 0.457 6.957 0.847 0.837 952 861 155 1066 1063 819.400
; assembly_19 versus WRKY18_WRKY18_Athamap (WRKY18:WRKY18:Athamap); m=33/41; ncol2=8; w=-1; offset=-1; strand=D; shift=5; score= 819.4; -----rGTCAAmG--- ; cor=0.719; Ncor=0.457; logoDP=6.957; NsEucl=0.847; NSW=0.837; rcor=952; rNcor=861; rlogoDP=155; rNsEucl=1066; rNSW=1063; rank_mean=819.400; match_rank= a 0 0 0 0 0 2 0 0 0 5 5 2 1 0 0 0 c 0 0 0 0 0 0 0 0 5 0 0 2 0 0 0 0 g 0 0 0 0 0 2 5 0 0 0 0 0 4 0 0 0 t 0 0 0 0 0 1 0 5 0 0 0 1 0 0 0 0

NAC045_MA2048.2_JASPAR_shift9 (NAC045:MA2048.2:JASPAR) 0.712 0.453 5.847 0.848 0.839 997 880 247 1064 1061 849.800
; assembly_19 versus NAC045_MA2048.2_JASPAR (NAC045:MA2048.2:JASPAR); m=34/41; ncol2=8; w=0; offset=3; strand=D; shift=9; score= 849.8; ---------sAAGCAA ; cor=0.712; Ncor=0.453; logoDP=5.847; NsEucl=0.848; NSW=0.839; rcor=997; rNcor=880; rlogoDP=247; rNsEucl=1064; rNSW=1061; rank_mean=849.800; match_rank= a 0 0 0 0 0 0 0 0 0 112 1389 1327 23 84 1328 1352 c 0 0 0 0 0 0 0 0 0 367 4 52 11 1158 17 3 g 0 0 0 0 0 0 0 0 0 814 5 16 1354 41 11 10 t 0 0 0 0 0 0 0 0 0 111 6 9 16 121 48 39

e_gw1.149.93.1_M0658_1.02_CISBP_shift6 (e_gw1.149.93.1:M0658_1.02:CISBP) 0.717 0.573 1.738 0.862 0.847 967 450 767 1022 1050 851.200
; assembly_19 versus e_gw1.149.93.1_M0658_1.02_CISBP (e_gw1.149.93.1:M0658_1.02:CISBP); m=35/41; ncol2=8; w=0; offset=0; strand=D; shift=6; score= 851.2; ------vrwaAmGy-- ; cor=0.717; Ncor=0.573; logoDP=1.738; NsEucl=0.862; NSW=0.847; rcor=967; rNcor=450; rlogoDP=767; rNsEucl=1022; rNSW=1050; rank_mean=851.200; match_rank= a 0 0 0 0 0 0 26 33 40 65 70 57 8 17 0 0 c 0 0 0 0 0 0 26 20 14 13 11 25 8 26 0 0 g 0 0 0 0 0 0 26 25 16 8 5 0 76 23 0 0 t 0 0 0 0 0 0 22 22 30 14 14 18 8 34 0 0

AT5G25475.DAP_M0007_AthalianaCistrome_shift9 (AT5G25475.DAP:M0007:AthalianaCistrome) 0.706 0.424 7.736 0.818 0.800 1052 987 66 1087 1087 855.800
; assembly_19 versus AT5G25475.DAP_M0007_AthalianaCistrome (AT5G25475.DAP:M0007:AthalianaCistrome); m=36/41; ncol2=6; w=0; offset=3; strand=D; shift=9; score= 855.8; ---------CAAGCA- ; cor=0.706; Ncor=0.424; logoDP=7.736; NsEucl=0.818; NSW=0.800; rcor=1052; rNcor=987; rlogoDP=66; rNsEucl=1087; rNSW=1087; rank_mean=855.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 218 218 0 0 218 0 c 0 0 0 0 0 0 0 0 0 196 0 0 0 218 0 0 g 0 0 0 0 0 0 0 0 0 22 0 0 218 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

NAC105_MA2053.2_JASPAR_shift9 (NAC105:MA2053.2:JASPAR) 0.719 0.420 5.852 0.850 0.843 948 1006 246 1060 1054 862.800
; assembly_19 versus NAC105_MA2053.2_JASPAR (NAC105:MA2053.2:JASPAR); m=37/41; ncol2=9; w=0; offset=3; strand=D; shift=9; score= 862.8; ---------cAAGCAA ; cor=0.719; Ncor=0.420; logoDP=5.852; NsEucl=0.850; NSW=0.843; rcor=948; rNcor=1006; rlogoDP=246; rNsEucl=1060; rNSW=1054; rank_mean=862.800; match_rank= a 0 0 0 0 0 0 0 0 0 128 1178 1122 9 73 1136 1172 c 0 0 0 0 0 0 0 0 0 680 10 69 12 990 20 4 g 0 0 0 0 0 0 0 0 0 214 5 3 1176 37 14 2 t 0 0 0 0 0 0 0 0 0 179 8 7 4 101 31 23

Lysine-specific_6a57_A_3D-footprint_shift7 (Lysine-specific:6a57_A:3D-footprint) 0.714 0.429 5.174 0.835 0.836 981 957 351 1082 1066 887.400
; assembly_19 versus Lysine-specific_6a57_A_3D-footprint (Lysine-specific:6a57_A:3D-footprint); m=38/41; ncol2=6; w=0; offset=1; strand=D; shift=7; score= 887.4; -------ACAGAG--- ; cor=0.714; Ncor=0.429; logoDP=5.174; NsEucl=0.835; NSW=0.836; rcor=981; rNcor=957; rlogoDP=351; rNsEucl=1082; rNSW=1066; rank_mean=887.400; match_rank= a 0 0 0 0 0 0 0 69 10 69 10 86 0 0 0 0 c 0 0 0 0 0 0 0 9 86 9 0 0 0 0 0 0 g 0 0 0 0 0 0 0 9 0 9 86 10 96 0 0 0 t 0 0 0 0 0 0 0 9 0 9 0 0 0 0 0 0

ATDOF2.4_M0648_1.02_CISBP_shift7 (ATDOF2.4:M0648_1.02:CISBP) 0.706 0.494 2.792 0.846 0.834 1054 735 680 1075 1072 923.200
; assembly_19 versus ATDOF2.4_M0648_1.02_CISBP (ATDOF2.4:M0648_1.02:CISBP); m=39/41; ncol2=7; w=0; offset=1; strand=D; shift=7; score= 923.2; -------awAAmGt-- ; cor=0.706; Ncor=0.494; logoDP=2.792; NsEucl=0.846; NSW=0.834; rcor=1054; rNcor=735; rlogoDP=680; rNsEucl=1075; rNSW=1072; rank_mean=923.200; match_rank= a 0 0 0 0 0 0 0 38 42 81 81 66 9 18 0 0 c 0 0 0 0 0 0 0 17 9 7 7 25 7 24 0 0 g 0 0 0 0 0 0 0 23 13 2 0 1 76 21 0 0 t 0 0 0 0 0 0 0 22 36 10 12 8 8 37 0 0

DOF2.4_MA0982.1_JASPAR_shift7 (DOF2.4:MA0982.1:JASPAR) 0.706 0.494 2.789 0.846 0.834 1057 737 682 1074 1071 924.200
; assembly_19 versus DOF2.4_MA0982.1_JASPAR (DOF2.4:MA0982.1:JASPAR); m=40/41; ncol2=7; w=0; offset=1; strand=D; shift=7; score= 924.2; -------awAAmGt-- ; cor=0.706; Ncor=0.494; logoDP=2.789; NsEucl=0.846; NSW=0.834; rcor=1057; rNcor=737; rlogoDP=682; rNsEucl=1074; rNSW=1071; rank_mean=924.200; match_rank= a 0 0 0 0 0 0 0 381 426 807 815 658 81 177 0 0 c 0 0 0 0 0 0 0 171 90 71 66 252 73 242 0 0 g 0 0 0 0 0 0 0 233 127 18 1 16 762 210 0 0 t 0 0 0 0 0 0 0 215 356 104 118 75 84 371 0 0

AT5G25475_UN0848.1_JASPAR_rc_shift9 (AT5G25475:UN0848.1:JASPAR_rc) 0.706 0.424 0.011 0.818 0.800 1051 986 1089 1086 1086 1059.600
; assembly_19 versus AT5G25475_UN0848.1_JASPAR_rc (AT5G25475:UN0848.1:JASPAR_rc); m=41/41; ncol2=6; w=0; offset=3; strand=R; shift=9; score= 1059.6; ---------CAAGCA- ; cor=0.706; Ncor=0.424; logoDP=0.011; NsEucl=0.818; NSW=0.800; rcor=1051; rNcor=986; rlogoDP=1089; rNsEucl=1086; rNSW=1086; rank_mean=1059.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 1000 1000 0 0 1000 0 c 0 0 0 0 0 0 0 0 0 899 0 0 0 1000 0 0 g 0 0 0 0 0 0 0 0 0 101 0 0 1000 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	match_rank	Aligned matrices
assembly_19_shift6 (assembly_19)													; assembly_19; m=0 (reference); ncol1=10; shift=6; ncol=16; ------wwCAAAGCww ; Alignment reference a 0 0 0 0 0 0 166 143 0 439 439 439 0 0 157 169 c 0 0 0 0 0 0 88 101 439 0 0 0 0 439 104 68 g 0 0 0 0 0 0 70 68 0 0 0 0 439 0 39 60 t 0 0 0 0 0 0 115 127 0 0 0 0 0 0 139 142
Dof2_MA0020.1_JASPAR_shift9 (Dof2:MA0020.1:JASPAR)	0.980	0.588	8.049	0.953	0.987	21	397	44	33	24	103.800	21	; assembly_19 versus Dof2_MA0020.1_JASPAR (Dof2:MA0020.1:JASPAR); m=1/41; ncol2=6; w=0; offset=3; strand=D; shift=9; score= 103.8; ---------AAAGcm- ; cor=0.980; Ncor=0.588; logoDP=8.049; NsEucl=0.953; NSW=0.987; rcor=21; rNcor=397; rlogoDP=44; rNsEucl=33; rNSW=24; rank_mean=103.800; match_rank=21 a 0 0 0 0 0 0 0 0 0 21 21 21 0 3 7 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 14 6 0 g 0 0 0 0 0 0 0 0 0 0 0 0 21 2 3 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0
Dof2_MA0020.2_JASPAR_shift9 (Dof2:MA0020.2:JASPAR)	0.981	0.491	8.048	0.945	0.985	18	748	45	50	27	177.600	50	; assembly_19 versus Dof2_MA0020.2_JASPAR (Dof2:MA0020.2:JASPAR); m=2/41; ncol2=5; w=0; offset=3; strand=D; shift=9; score= 177.6; ---------AAAGc-- ; cor=0.981; Ncor=0.491; logoDP=8.048; NsEucl=0.945; NSW=0.985; rcor=18; rNcor=748; rlogoDP=45; rNsEucl=50; rNSW=27; rank_mean=177.600; match_rank=50 a 0 0 0 0 0 0 0 0 0 21 21 21 0 3 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 21 2 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0
MNB1A_MA0053.1_JASPAR_shift9 (MNB1A:MA0053.1:JASPAR)	0.969	0.484	8.050	0.931	0.976	29	771	41	121	38	200.000		; assembly_19 versus MNB1A_MA0053.1_JASPAR (MNB1A:MA0053.1:JASPAR); m=3/41; ncol2=5; w=0; offset=3; strand=D; shift=9; score= 200; ---------AAAGc-- ; cor=0.969; Ncor=0.484; logoDP=8.050; NsEucl=0.931; NSW=0.976; rcor=29; rNcor=771; rlogoDP=41; rNsEucl=121; rNSW=38; rank_mean=200.000; match_rank= a 0 0 0 0 0 0 0 0 0 15 15 15 0 3 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0
PBF_MA0064.1_JASPAR_shift9 (PBF:MA0064.1:JASPAR)	0.960	0.480	7.962	0.923	0.970	34	778	48	185	54	219.800		; assembly_19 versus PBF_MA0064.1_JASPAR (PBF:MA0064.1:JASPAR); m=4/41; ncol2=5; w=0; offset=3; strand=D; shift=9; score= 219.8; ---------AAAGy-- ; cor=0.960; Ncor=0.480; logoDP=7.962; NsEucl=0.923; NSW=0.970; rcor=34; rNcor=778; rlogoDP=48; rNsEucl=185; rNSW=54; rank_mean=219.800; match_rank= a 0 0 0 0 0 0 0 0 0 16 16 16 0 1 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 16 1 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0
Dof3_MA0021.1_JASPAR_shift9 (Dof3:MA0021.1:JASPAR)	0.909	0.545	7.949	0.904	0.945	97	550	51	509	154	272.200		; assembly_19 versus Dof3_MA0021.1_JASPAR (Dof3:MA0021.1:JASPAR); m=5/41; ncol2=6; w=0; offset=3; strand=D; shift=9; score= 272.2; ---------AAAGyv- ; cor=0.909; Ncor=0.545; logoDP=7.949; NsEucl=0.904; NSW=0.945; rcor=97; rNcor=550; rlogoDP=51; rNsEucl=509; rNSW=154; rank_mean=272.200; match_rank= a 0 0 0 0 0 0 0 0 0 21 21 21 0 0 6 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 g 0 0 0 0 0 0 0 0 0 0 0 0 21 3 9 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0
dof43.DAP_M0281_AthalianaCistrome_shift9 (dof43.DAP:M0281:AthalianaCistrome)	0.877	0.438	7.187	0.904	0.935	162	931	127	511	237	393.600		; assembly_19 versus dof43.DAP_M0281_AthalianaCistrome (dof43.DAP:M0281:AthalianaCistrome); m=6/41; ncol2=11; w=0; offset=3; strand=D; shift=9; score= 393.6; ---------AAAGyya ; cor=0.877; Ncor=0.438; logoDP=7.187; NsEucl=0.904; NSW=0.935; rcor=162; rNcor=931; rlogoDP=127; rNsEucl=511; rNSW=237; rank_mean=393.600; match_rank= a 0 0 0 0 0 0 0 0 0 62 62 61 1 11 0 39 c 0 0 0 0 0 0 0 0 0 0 0 1 1 24 21 3 g 0 0 0 0 0 0 0 0 0 0 0 0 59 11 0 14 t 0 0 0 0 0 0 0 0 0 0 0 0 1 16 41 6
ChFLMrsat_EEAD0162_EEADannot_shift5 (ChFLMrsat:EEAD0162:EEADannot)	0.765	0.638	6.926	0.899	0.897	694	221	157	621	673	473.200		; assembly_19 versus ChFLMrsat_EEAD0162_EEADannot (ChFLMrsat:EEAD0162:EEADannot); m=7/41; ncol2=12; w=-1; offset=-1; strand=D; shift=5; score= 473.2; -----wwaCAAAACaw ; cor=0.765; Ncor=0.638; logoDP=6.926; NsEucl=0.899; NSW=0.897; rcor=694; rNcor=221; rlogoDP=157; rNsEucl=621; rNSW=673; rank_mean=473.200; match_rank= a 0 0 0 0 0 988 891 1709 6 2525 2491 2542 2536 6 1601 940 c 0 0 0 0 0 584 584 398 2628 105 103 83 62 2601 468 566 g 0 0 0 0 0 436 478 235 18 44 61 49 70 22 254 508 t 0 0 0 0 0 745 800 411 101 79 98 79 85 124 430 739
APETALA2a_EEAD0067_EEADannot_shift6 (APETALA2a:EEAD0067:EEADannot)	0.866	0.519	7.731	0.874	0.905	204	643	67	947	586	489.400		; assembly_19 versus APETALA2a_EEAD0067_EEADannot (APETALA2a:EEAD0067:EEADannot); m=8/41; ncol2=6; w=0; offset=0; strand=D; shift=6; score= 489.4; ------AACAAA---- ; cor=0.866; Ncor=0.519; logoDP=7.731; NsEucl=0.874; NSW=0.905; rcor=204; rNcor=643; rlogoDP=67; rNsEucl=947; rNSW=586; rank_mean=489.400; match_rank= a 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 0 c 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
e_gw1.170.52.1_M0659_1.02_CISBP_shift6 (e_gw1.170.52.1:M0659_1.02:CISBP)	0.737	0.737	3.865	0.896	0.892	840	56	534	671	731	566.400		; assembly_19 versus e_gw1.170.52.1_M0659_1.02_CISBP (e_gw1.170.52.1:M0659_1.02:CISBP); m=9/41; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 566.4; ------srwAAAGydr ; cor=0.737; Ncor=0.737; logoDP=3.865; NsEucl=0.896; NSW=0.892; rcor=840; rNcor=56; rlogoDP=534; rNsEucl=671; rNSW=731; rank_mean=566.400; match_rank= a 0 0 0 0 0 0 24 30 40 89 89 72 7 18 27 28 c 0 0 0 0 0 0 27 22 11 4 5 20 2 26 19 22 g 0 0 0 0 0 0 25 26 17 1 0 3 84 23 27 27 t 0 0 0 0 0 0 24 22 32 6 6 5 7 33 27 23
PHYPADRAFT_140773_MA0987.1_JASPAR_shift6 (PHYPADRAFT_140773:MA0987.1:JASPAR)	0.736	0.736	3.838	0.896	0.892	847	57	537	673	735	569.800		; assembly_19 versus PHYPADRAFT_140773_MA0987.1_JASPAR (PHYPADRAFT_140773:MA0987.1:JASPAR); m=10/41; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 569.8; ------srwAAAGydr ; cor=0.736; Ncor=0.736; logoDP=3.838; NsEucl=0.896; NSW=0.892; rcor=847; rNcor=57; rlogoDP=537; rNsEucl=673; rNSW=735; rank_mean=569.800; match_rank= a 0 0 0 0 0 0 243 302 396 888 892 715 72 182 271 280 c 0 0 0 0 0 0 266 215 111 43 46 205 22 258 193 218 g 0 0 0 0 0 0 253 260 173 10 1 28 839 229 271 272 t 0 0 0 0 0 0 238 222 321 60 61 52 67 331 265 229
DOF4.3_MA1747.2_JASPAR_rc_shift8 (DOF4.3:MA1747.2:JASPAR_rc)	0.812	0.433	7.759	0.889	0.901	438	949	63	791	632	574.600		; assembly_19 versus DOF4.3_MA1747.2_JASPAR_rc (DOF4.3:MA1747.2:JASPAR_rc); m=11/41; ncol2=13; w=0; offset=2; strand=R; shift=8; score= 574.6; --------wAAAGcyw ; cor=0.812; Ncor=0.433; logoDP=7.759; NsEucl=0.889; NSW=0.901; rcor=438; rNcor=949; rlogoDP=63; rNsEucl=791; rNSW=632; rank_mean=574.600; match_rank= a 0 0 0 0 0 0 0 0 424 998 998 995 2 95 76 429 c 0 0 0 0 0 0 0 0 103 0 0 0 0 571 345 91 g 0 0 0 0 0 0 0 0 66 2 0 5 995 147 2 178 t 0 0 0 0 0 0 0 0 407 0 2 0 3 188 578 302
dof43.ampDAP_M0253_AthalianaCistrome_shift8 (dof43.ampDAP:M0253:AthalianaCistrome)	0.812	0.406	7.780	0.889	0.901	437	1057	61	789	631	595.000		; assembly_19 versus dof43.ampDAP_M0253_AthalianaCistrome (dof43.ampDAP:M0253:AthalianaCistrome); m=12/41; ncol2=14; w=0; offset=2; strand=D; shift=8; score= 595; --------wAAAGcyw ; cor=0.812; Ncor=0.406; logoDP=7.780; NsEucl=0.889; NSW=0.901; rcor=437; rNcor=1057; rlogoDP=61; rNsEucl=789; rNSW=631; rank_mean=595.000; match_rank= a 0 0 0 0 0 0 0 0 246 579 579 577 1 55 44 249 c 0 0 0 0 0 0 0 0 60 0 0 0 0 331 200 53 g 0 0 0 0 0 0 0 0 38 1 0 3 577 85 1 103 t 0 0 0 0 0 0 0 0 236 0 1 0 2 109 335 175
MBD2_MA2370.1_JASPAR_shift11 (MBD2:MA2370.1:JASPAR)	0.831	0.416	3.390	0.877	0.924	346	1014	592	914	360	645.200		; assembly_19 versus MBD2_MA2370.1_JASPAR (MBD2:MA2370.1:JASPAR); m=13/41; ncol2=5; w=0; offset=5; strand=D; shift=11; score= 645.2; -----------AGCTr ; cor=0.831; Ncor=0.416; logoDP=3.390; NsEucl=0.877; NSW=0.924; rcor=346; rNcor=1014; rlogoDP=592; rNsEucl=914; rNSW=360; rank_mean=645.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 808 0 190 98 315 c 0 0 0 0 0 0 0 0 0 0 0 0 0 808 0 27 g 0 0 0 0 0 0 0 0 0 0 0 0 900 0 0 432 t 0 0 0 0 0 0 0 0 0 0 0 190 98 0 900 224
TREE1_MA1801.2_JASPAR_shift11 (TREE1:MA1801.2:JASPAR)	0.831	0.416	3.383	0.877	0.924	347	1015	595	915	361	646.600		; assembly_19 versus TREE1_MA1801.2_JASPAR (TREE1:MA1801.2:JASPAR); m=14/41; ncol2=5; w=0; offset=5; strand=D; shift=11; score= 646.6; -----------AGCTr ; cor=0.831; Ncor=0.416; logoDP=3.383; NsEucl=0.877; NSW=0.924; rcor=347; rNcor=1015; rlogoDP=595; rNsEucl=915; rNSW=361; rank_mean=646.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 809 0 191 99 316 c 0 0 0 0 0 0 0 0 0 0 0 0 0 809 0 27 g 0 0 0 0 0 0 0 0 0 0 0 0 901 0 0 433 t 0 0 0 0 0 0 0 0 0 0 0 191 99 0 901 224
AT1G64620_M0647_1.02_CISBP_shift6 (AT1G64620:M0647_1.02:CISBP)	0.712	0.712	3.143	0.892	0.883	1004	82	626	743	816	654.200		; assembly_19 versus AT1G64620_M0647_1.02_CISBP (AT1G64620:M0647_1.02:CISBP); m=15/41; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 654.2; ------vrwAAaGtdr ; cor=0.712; Ncor=0.712; logoDP=3.143; NsEucl=0.892; NSW=0.883; rcor=1004; rNcor=82; rlogoDP=626; rNsEucl=743; rNSW=816; rank_mean=654.200; match_rank= a 0 0 0 0 0 0 25 32 41 81 83 66 7 17 27 29 c 0 0 0 0 0 0 26 20 10 7 7 23 2 24 19 21 g 0 0 0 0 0 0 26 25 14 4 0 3 85 23 27 27 t 0 0 0 0 0 0 23 23 35 8 10 8 6 36 27 23
gw1.385.26.1_M0663_1.02_CISBP_shift6 (gw1.385.26.1:M0663_1.02:CISBP)	0.710	0.710	3.328	0.892	0.883	1026	93	600	742	815	655.200		; assembly_19 versus gw1.385.26.1_M0663_1.02_CISBP (gw1.385.26.1:M0663_1.02:CISBP); m=16/41; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 655.2; ------vrwAAaGydm ; cor=0.710; Ncor=0.710; logoDP=3.328; NsEucl=0.892; NSW=0.883; rcor=1026; rNcor=93; rlogoDP=600; rNsEucl=742; rNSW=815; rank_mean=655.200; match_rank= a 0 0 0 0 0 0 25 34 46 83 86 64 6 15 26 28 c 0 0 0 0 0 0 26 19 9 7 6 22 3 27 17 26 g 0 0 0 0 0 0 26 25 13 2 0 5 86 21 31 23 t 0 0 0 0 0 0 23 22 32 8 8 9 5 37 26 23
DOF1.8_MA0981.1_JASPAR_shift6 (DOF1.8:MA0981.1:JASPAR)	0.711	0.711	3.127	0.892	0.883	1008	85	627	744	818	656.400		; assembly_19 versus DOF1.8_MA0981.1_JASPAR (DOF1.8:MA0981.1:JASPAR); m=17/41; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 656.4; ------vawAAaGtdr ; cor=0.711; Ncor=0.711; logoDP=3.127; NsEucl=0.892; NSW=0.883; rcor=1008; rNcor=85; rlogoDP=627; rNsEucl=744; rNSW=818; rank_mean=656.400; match_rank= a 0 0 0 0 0 0 251 321 415 812 831 658 65 170 268 288 c 0 0 0 0 0 0 259 197 100 72 64 233 23 241 189 209 g 0 0 0 0 0 0 256 250 135 38 3 27 846 231 270 269 t 0 0 0 0 0 0 234 233 350 77 102 83 65 359 273 234
PHYPADRAFT_38837_MA1022.1_JASPAR_shift6 (PHYPADRAFT_38837:MA1022.1:JASPAR)	0.707	0.707	3.292	0.892	0.883	1043	98	608	748	822	663.800		; assembly_19 versus PHYPADRAFT_38837_MA1022.1_JASPAR (PHYPADRAFT_38837:MA1022.1:JASPAR); m=18/41; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 663.8; ------vrwAAaGydm ; cor=0.707; Ncor=0.707; logoDP=3.292; NsEucl=0.892; NSW=0.883; rcor=1043; rNcor=98; rlogoDP=608; rNsEucl=748; rNSW=822; rank_mean=663.800; match_rank= a 0 0 0 0 0 0 251 343 463 828 855 644 61 150 259 283 c 0 0 0 0 0 0 264 186 85 68 62 216 27 269 174 262 g 0 0 0 0 0 0 257 254 129 24 1 54 860 207 307 227 t 0 0 0 0 0 0 228 217 323 81 82 86 52 374 259 227
DOF5.3_MA1071.1_JASPAR_shift6 (DOF5.3:MA1071.1:JASPAR)	0.791	0.554	3.040	0.877	0.893	540	524	635	923	713	667.000		; assembly_19 versus DOF5.3_MA1071.1_JASPAR (DOF5.3:MA1071.1:JASPAR); m=19/41; ncol2=7; w=0; offset=0; strand=D; shift=6; score= 667; ------gawAAmG--- ; cor=0.791; Ncor=0.554; logoDP=3.040; NsEucl=0.877; NSW=0.893; rcor=540; rNcor=524; rlogoDP=635; rNsEucl=923; rNSW=713; rank_mean=667.000; match_rank= a 0 0 0 0 0 0 247 327 396 842 850 611 66 0 0 0 c 0 0 0 0 0 0 247 213 128 61 79 329 52 0 0 0 g 0 0 0 0 0 0 262 228 146 17 0 14 767 0 0 0 t 0 0 0 0 0 0 244 233 331 81 70 47 116 0 0 0
TMO6_M0654_1.02_CISBP_shift6 (TMO6:M0654_1.02:CISBP)	0.791	0.554	3.016	0.876	0.893	545	525	639	925	718	670.400		; assembly_19 versus TMO6_M0654_1.02_CISBP (TMO6:M0654_1.02:CISBP); m=20/41; ncol2=7; w=0; offset=0; strand=D; shift=6; score= 670.4; ------vawAAmG--- ; cor=0.791; Ncor=0.554; logoDP=3.016; NsEucl=0.876; NSW=0.893; rcor=545; rNcor=525; rlogoDP=639; rNsEucl=925; rNSW=718; rank_mean=670.400; match_rank= a 0 0 0 0 0 0 25 33 40 84 85 61 7 0 0 0 c 0 0 0 0 0 0 25 21 13 6 8 33 5 0 0 0 g 0 0 0 0 0 0 26 23 14 2 0 1 76 0 0 0 t 0 0 0 0 0 0 24 23 33 8 7 5 12 0 0 0
PHYPADRAFT_153324_MA0989.1_JASPAR_shift6 (PHYPADRAFT_153324:MA0989.1:JASPAR)	0.718	0.646	4.045	0.883	0.876	958	203	512	861	880	682.800		; assembly_19 versus PHYPADRAFT_153324_MA0989.1_JASPAR (PHYPADRAFT_153324:MA0989.1:JASPAR); m=21/41; ncol2=9; w=0; offset=0; strand=D; shift=6; score= 682.8; ------vrwAAaGyd- ; cor=0.718; Ncor=0.646; logoDP=4.045; NsEucl=0.883; NSW=0.876; rcor=958; rNcor=203; rlogoDP=512; rNsEucl=861; rNSW=880; rank_mean=682.800; match_rank= a 0 0 0 0 0 0 253 334 482 861 926 672 71 139 285 0 c 0 0 0 0 0 0 264 193 71 62 36 147 27 288 158 0 g 0 0 0 0 0 0 261 255 118 13 0 52 898 195 297 0 t 0 0 0 0 0 0 222 218 330 65 38 129 5 378 260 0
Lysine-specific_6jnl_A_3D-footprint_shift7 (Lysine-specific:6jnl_A:3D-footprint)	0.790	0.474	7.064	0.856	0.875	552	813	139	1041	888	686.600		; assembly_19 versus Lysine-specific_6jnl_A_3D-footprint (Lysine-specific:6jnl_A:3D-footprint); m=22/41; ncol2=6; w=0; offset=1; strand=D; shift=7; score= 686.6; -------aCAGAG--- ; cor=0.790; Ncor=0.474; logoDP=7.064; NsEucl=0.856; NSW=0.875; rcor=552; rNcor=813; rlogoDP=139; rNsEucl=1041; rNSW=888; rank_mean=686.600; match_rank= a 0 0 0 0 0 0 0 48 0 96 16 96 0 0 0 0 c 0 0 0 0 0 0 0 16 80 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 16 0 0 80 0 96 0 0 0 t 0 0 0 0 0 0 0 16 16 0 0 0 0 0 0 0
Lysine-specific_6jnm_A_3D-footprint_rc_shift6 (Lysine-specific:6jnm_A:3D-footprint_rc)	0.815	0.570	0.054	0.883	0.904	423	463	1086	859	604	687.000		; assembly_19 versus Lysine-specific_6jnm_A_3D-footprint_rc (Lysine-specific:6jnm_A:3D-footprint_rc); m=23/41; ncol2=7; w=0; offset=0; strand=R; shift=6; score= 687; ------aACAnAG--- ; cor=0.815; Ncor=0.570; logoDP=0.054; NsEucl=0.883; NSW=0.904; rcor=423; rNcor=463; rlogoDP=1086; rNsEucl=859; rNSW=604; rank_mean=687.000; match_rank= a 0 0 0 0 0 0 38 93 0 96 24 81 0 0 0 0 c 0 0 0 0 0 0 19 1 96 0 24 4 0 0 0 0 g 0 0 0 0 0 0 19 1 0 0 24 4 96 0 0 0 t 0 0 0 0 0 0 20 1 0 0 24 7 0 0 0 0
e_gw1.392.16.1_M0660_1.02_CISBP_shift6 (e_gw1.392.16.1:M0660_1.02:CISBP)	0.717	0.645	4.033	0.882	0.876	966	206	514	865	885	687.200		; assembly_19 versus e_gw1.392.16.1_M0660_1.02_CISBP (e_gw1.392.16.1:M0660_1.02:CISBP); m=24/41; ncol2=9; w=0; offset=0; strand=D; shift=6; score= 687.2; ------vrwAAaGyd- ; cor=0.717; Ncor=0.645; logoDP=4.033; NsEucl=0.882; NSW=0.876; rcor=966; rNcor=206; rlogoDP=514; rNsEucl=865; rNSW=885; rank_mean=687.200; match_rank= a 0 0 0 0 0 0 25 33 48 86 92 67 7 13 28 0 c 0 0 0 0 0 0 26 19 7 6 4 15 3 29 16 0 g 0 0 0 0 0 0 27 26 12 2 0 5 90 20 30 0 t 0 0 0 0 0 0 22 22 33 6 4 13 0 38 26 0
DOF4.3_MA1747.1_JASPAR_rc_shift8 (DOF4.3:MA1747.1:JASPAR_rc)	0.812	0.406	4.014	0.889	0.901	441	1058	515	792	633	687.800		; assembly_19 versus DOF4.3_MA1747.1_JASPAR_rc (DOF4.3:MA1747.1:JASPAR_rc); m=25/41; ncol2=14; w=0; offset=2; strand=R; shift=8; score= 687.8; --------wAAAGcyw ; cor=0.812; Ncor=0.406; logoDP=4.014; NsEucl=0.889; NSW=0.901; rcor=441; rNcor=1058; rlogoDP=515; rNsEucl=792; rNSW=633; rank_mean=687.800; match_rank= a 0 0 0 0 0 0 0 0 424 998 998 995 1.724 94.828 75.862 429.31 c 0 0 0 0 0 0 0 0 103 0 0 0 0 570.69 345 91.379 g 0 0 0 0 0 0 0 0 65.517 1.724 0 5.172 995 147 1.724 178 t 0 0 0 0 0 0 0 0 407 0 1.724 0 3.448 188 578 302
NAC007_MA2044.2_JASPAR_shift9 (NAC007:MA2044.2:JASPAR)	0.743	0.520	6.296	0.857	0.856	800	638	208	1037	1022	741.000		; assembly_19 versus NAC007_MA2044.2_JASPAR (NAC007:MA2044.2:JASPAR); m=26/41; ncol2=7; w=0; offset=3; strand=D; shift=9; score= 741; ---------cAAGCAA ; cor=0.743; Ncor=0.520; logoDP=6.296; NsEucl=0.857; NSW=0.856; rcor=800; rNcor=638; rlogoDP=208; rNsEucl=1037; rNSW=1022; rank_mean=741.000; match_rank= a 0 0 0 0 0 0 0 0 0 285 2117 1962 4 3 1974 2067 c 0 0 0 0 0 0 0 0 0 1236 13 161 7 2037 60 15 g 0 0 0 0 0 0 0 0 0 361 19 11 2144 9 40 13 t 0 0 0 0 0 0 0 0 0 291 24 39 18 124 99 78
NAC076_MA2036.2_JASPAR_shift9 (NAC076:MA2036.2:JASPAR)	0.741	0.518	6.280	0.856	0.854	811	650	212	1043	1028	748.800		; assembly_19 versus NAC076_MA2036.2_JASPAR (NAC076:MA2036.2:JASPAR); m=27/41; ncol2=7; w=0; offset=3; strand=D; shift=9; score= 748.8; ---------cAAGCAA ; cor=0.741; Ncor=0.518; logoDP=6.280; NsEucl=0.856; NSW=0.854; rcor=811; rNcor=650; rlogoDP=212; rNsEucl=1043; rNSW=1028; rank_mean=748.800; match_rank= a 0 0 0 0 0 0 0 0 0 408 3171 2963 7 16 2965 3088 c 0 0 0 0 0 0 0 0 0 1879 22 216 18 3023 81 19 g 0 0 0 0 0 0 0 0 0 539 20 16 3193 23 55 17 t 0 0 0 0 0 0 0 0 0 421 34 52 29 185 146 123
SMB_MA2010.2_JASPAR_shift9 (SMB:MA2010.2:JASPAR)	0.737	0.516	6.071	0.855	0.854	841	658	226	1046	1030	760.200		; assembly_19 versus SMB_MA2010.2_JASPAR (SMB:MA2010.2:JASPAR); m=28/41; ncol2=7; w=0; offset=3; strand=D; shift=9; score= 760.2; ---------cAAGCAA ; cor=0.737; Ncor=0.516; logoDP=6.071; NsEucl=0.855; NSW=0.854; rcor=841; rNcor=658; rlogoDP=226; rNsEucl=1046; rNSW=1030; rank_mean=760.200; match_rank= a 0 0 0 0 0 0 0 0 0 418 3480 3246 6 8 3245 3387 c 0 0 0 0 0 0 0 0 0 2165 45 251 21 3329 115 33 g 0 0 0 0 0 0 0 0 0 553 35 25 3530 33 64 29 t 0 0 0 0 0 0 0 0 0 466 42 80 45 232 178 153
DOF5.6_MA0983.1_JASPAR_shift6 (DOF5.6:MA0983.1:JASPAR)	0.705	0.564	4.477	0.866	0.857	1060	484	450	990	1013	799.400		; assembly_19 versus DOF5.6_MA0983.1_JASPAR (DOF5.6:MA0983.1:JASPAR); m=29/41; ncol2=8; w=0; offset=0; strand=D; shift=6; score= 799.4; ------vawAAmGt-- ; cor=0.705; Ncor=0.564; logoDP=4.477; NsEucl=0.866; NSW=0.857; rcor=1060; rNcor=484; rlogoDP=450; rNsEucl=990; rNSW=1013; rank_mean=799.400; match_rank= a 0 0 0 0 0 0 254 364 432 955 928 613 50 152 0 0 c 0 0 0 0 0 0 257 170 84 35 40 308 28 247 0 0 g 0 0 0 0 0 0 262 227 108 1 1 56 884 213 0 0 t 0 0 0 0 0 0 228 239 376 10 32 24 38 388 0 0
DOF5.6_M0657_1.02_CISBP_shift6 (DOF5.6:M0657_1.02:CISBP)	0.703	0.563	4.462	0.866	0.856	1071	494	454	994	1018	806.200		; assembly_19 versus DOF5.6_M0657_1.02_CISBP (DOF5.6:M0657_1.02:CISBP); m=30/41; ncol2=8; w=0; offset=0; strand=D; shift=6; score= 806.2; ------vawAAmGy-- ; cor=0.703; Ncor=0.563; logoDP=4.462; NsEucl=0.866; NSW=0.856; rcor=1071; rNcor=494; rlogoDP=454; rNsEucl=994; rNSW=1018; rank_mean=806.200; match_rank= a 0 0 0 0 0 0 25 36 43 95 93 61 5 15 0 0 c 0 0 0 0 0 0 26 17 8 4 4 31 3 25 0 0 g 0 0 0 0 0 0 26 23 11 0 0 6 88 21 0 0 t 0 0 0 0 0 0 23 24 38 1 3 2 4 39 0 0
NAC101_MA2050.2_JASPAR_shift9 (NAC101:MA2050.2:JASPAR)	0.716	0.501	5.869	0.849	0.840	973	710	243	1062	1058	809.200		; assembly_19 versus NAC101_MA2050.2_JASPAR (NAC101:MA2050.2:JASPAR); m=31/41; ncol2=7; w=0; offset=3; strand=D; shift=9; score= 809.2; ---------CAAGCAA ; cor=0.716; Ncor=0.501; logoDP=5.869; NsEucl=0.849; NSW=0.840; rcor=973; rNcor=710; rlogoDP=243; rNsEucl=1062; rNSW=1058; rank_mean=809.200; match_rank= a 0 0 0 0 0 0 0 0 0 248 2593 2461 32 82 2449 2513 c 0 0 0 0 0 0 0 0 0 1815 11 145 35 2318 56 14 g 0 0 0 0 0 0 0 0 0 253 17 7 2538 57 42 14 t 0 0 0 0 0 0 0 0 0 333 28 36 44 192 102 108
NAC91_NUT1_B73_1_m1_EEAD0491_EEADannot_shift0 (NAC91_NUT1_B73_1_m1:EEAD0491:EEADannot)	0.720	0.405	5.123	0.883	0.877	944	1062	359	851	869	817.000		; assembly_19 versus NAC91_NUT1_B73_1_m1_EEAD0491_EEADannot (NAC91_NUT1_B73_1_m1:EEAD0491:EEADannot); m=32/41; ncol2=15; w=-6; offset=-6; strand=D; shift=0; score= 817; MkTrvartbsAAGCa- ; cor=0.720; Ncor=0.405; logoDP=5.123; NsEucl=0.883; NSW=0.877; rcor=944; rNcor=1062; rlogoDP=359; rNsEucl=851; rNSW=869; rank_mean=817.000; match_rank= a 26 0 0 35 26 50 31 23 15 9 98 76 0 0 60 0 c 72 0 0 14 26 19 24 19 30 29 2 24 0 69 19 0 g 0 55 0 42 29 19 29 20 25 44 0 0 100 14 6 0 t 2 45 100 9 19 12 16 38 30 18 0 0 0 17 15 0
WRKY18_WRKY18_Athamap_shift5 (WRKY18:WRKY18:Athamap)	0.719	0.457	6.957	0.847	0.837	952	861	155	1066	1063	819.400		; assembly_19 versus WRKY18_WRKY18_Athamap (WRKY18:WRKY18:Athamap); m=33/41; ncol2=8; w=-1; offset=-1; strand=D; shift=5; score= 819.4; -----rGTCAAmG--- ; cor=0.719; Ncor=0.457; logoDP=6.957; NsEucl=0.847; NSW=0.837; rcor=952; rNcor=861; rlogoDP=155; rNsEucl=1066; rNSW=1063; rank_mean=819.400; match_rank= a 0 0 0 0 0 2 0 0 0 5 5 2 1 0 0 0 c 0 0 0 0 0 0 0 0 5 0 0 2 0 0 0 0 g 0 0 0 0 0 2 5 0 0 0 0 0 4 0 0 0 t 0 0 0 0 0 1 0 5 0 0 0 1 0 0 0 0
NAC045_MA2048.2_JASPAR_shift9 (NAC045:MA2048.2:JASPAR)	0.712	0.453	5.847	0.848	0.839	997	880	247	1064	1061	849.800		; assembly_19 versus NAC045_MA2048.2_JASPAR (NAC045:MA2048.2:JASPAR); m=34/41; ncol2=8; w=0; offset=3; strand=D; shift=9; score= 849.8; ---------sAAGCAA ; cor=0.712; Ncor=0.453; logoDP=5.847; NsEucl=0.848; NSW=0.839; rcor=997; rNcor=880; rlogoDP=247; rNsEucl=1064; rNSW=1061; rank_mean=849.800; match_rank= a 0 0 0 0 0 0 0 0 0 112 1389 1327 23 84 1328 1352 c 0 0 0 0 0 0 0 0 0 367 4 52 11 1158 17 3 g 0 0 0 0 0 0 0 0 0 814 5 16 1354 41 11 10 t 0 0 0 0 0 0 0 0 0 111 6 9 16 121 48 39
e_gw1.149.93.1_M0658_1.02_CISBP_shift6 (e_gw1.149.93.1:M0658_1.02:CISBP)	0.717	0.573	1.738	0.862	0.847	967	450	767	1022	1050	851.200		; assembly_19 versus e_gw1.149.93.1_M0658_1.02_CISBP (e_gw1.149.93.1:M0658_1.02:CISBP); m=35/41; ncol2=8; w=0; offset=0; strand=D; shift=6; score= 851.2; ------vrwaAmGy-- ; cor=0.717; Ncor=0.573; logoDP=1.738; NsEucl=0.862; NSW=0.847; rcor=967; rNcor=450; rlogoDP=767; rNsEucl=1022; rNSW=1050; rank_mean=851.200; match_rank= a 0 0 0 0 0 0 26 33 40 65 70 57 8 17 0 0 c 0 0 0 0 0 0 26 20 14 13 11 25 8 26 0 0 g 0 0 0 0 0 0 26 25 16 8 5 0 76 23 0 0 t 0 0 0 0 0 0 22 22 30 14 14 18 8 34 0 0
AT5G25475.DAP_M0007_AthalianaCistrome_shift9 (AT5G25475.DAP:M0007:AthalianaCistrome)	0.706	0.424	7.736	0.818	0.800	1052	987	66	1087	1087	855.800		; assembly_19 versus AT5G25475.DAP_M0007_AthalianaCistrome (AT5G25475.DAP:M0007:AthalianaCistrome); m=36/41; ncol2=6; w=0; offset=3; strand=D; shift=9; score= 855.8; ---------CAAGCA- ; cor=0.706; Ncor=0.424; logoDP=7.736; NsEucl=0.818; NSW=0.800; rcor=1052; rNcor=987; rlogoDP=66; rNsEucl=1087; rNSW=1087; rank_mean=855.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 218 218 0 0 218 0 c 0 0 0 0 0 0 0 0 0 196 0 0 0 218 0 0 g 0 0 0 0 0 0 0 0 0 22 0 0 218 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
NAC105_MA2053.2_JASPAR_shift9 (NAC105:MA2053.2:JASPAR)	0.719	0.420	5.852	0.850	0.843	948	1006	246	1060	1054	862.800		; assembly_19 versus NAC105_MA2053.2_JASPAR (NAC105:MA2053.2:JASPAR); m=37/41; ncol2=9; w=0; offset=3; strand=D; shift=9; score= 862.8; ---------cAAGCAA ; cor=0.719; Ncor=0.420; logoDP=5.852; NsEucl=0.850; NSW=0.843; rcor=948; rNcor=1006; rlogoDP=246; rNsEucl=1060; rNSW=1054; rank_mean=862.800; match_rank= a 0 0 0 0 0 0 0 0 0 128 1178 1122 9 73 1136 1172 c 0 0 0 0 0 0 0 0 0 680 10 69 12 990 20 4 g 0 0 0 0 0 0 0 0 0 214 5 3 1176 37 14 2 t 0 0 0 0 0 0 0 0 0 179 8 7 4 101 31 23
Lysine-specific_6a57_A_3D-footprint_shift7 (Lysine-specific:6a57_A:3D-footprint)	0.714	0.429	5.174	0.835	0.836	981	957	351	1082	1066	887.400		; assembly_19 versus Lysine-specific_6a57_A_3D-footprint (Lysine-specific:6a57_A:3D-footprint); m=38/41; ncol2=6; w=0; offset=1; strand=D; shift=7; score= 887.4; -------ACAGAG--- ; cor=0.714; Ncor=0.429; logoDP=5.174; NsEucl=0.835; NSW=0.836; rcor=981; rNcor=957; rlogoDP=351; rNsEucl=1082; rNSW=1066; rank_mean=887.400; match_rank= a 0 0 0 0 0 0 0 69 10 69 10 86 0 0 0 0 c 0 0 0 0 0 0 0 9 86 9 0 0 0 0 0 0 g 0 0 0 0 0 0 0 9 0 9 86 10 96 0 0 0 t 0 0 0 0 0 0 0 9 0 9 0 0 0 0 0 0
ATDOF2.4_M0648_1.02_CISBP_shift7 (ATDOF2.4:M0648_1.02:CISBP)	0.706	0.494	2.792	0.846	0.834	1054	735	680	1075	1072	923.200		; assembly_19 versus ATDOF2.4_M0648_1.02_CISBP (ATDOF2.4:M0648_1.02:CISBP); m=39/41; ncol2=7; w=0; offset=1; strand=D; shift=7; score= 923.2; -------awAAmGt-- ; cor=0.706; Ncor=0.494; logoDP=2.792; NsEucl=0.846; NSW=0.834; rcor=1054; rNcor=735; rlogoDP=680; rNsEucl=1075; rNSW=1072; rank_mean=923.200; match_rank= a 0 0 0 0 0 0 0 38 42 81 81 66 9 18 0 0 c 0 0 0 0 0 0 0 17 9 7 7 25 7 24 0 0 g 0 0 0 0 0 0 0 23 13 2 0 1 76 21 0 0 t 0 0 0 0 0 0 0 22 36 10 12 8 8 37 0 0
DOF2.4_MA0982.1_JASPAR_shift7 (DOF2.4:MA0982.1:JASPAR)	0.706	0.494	2.789	0.846	0.834	1057	737	682	1074	1071	924.200		; assembly_19 versus DOF2.4_MA0982.1_JASPAR (DOF2.4:MA0982.1:JASPAR); m=40/41; ncol2=7; w=0; offset=1; strand=D; shift=7; score= 924.2; -------awAAmGt-- ; cor=0.706; Ncor=0.494; logoDP=2.789; NsEucl=0.846; NSW=0.834; rcor=1057; rNcor=737; rlogoDP=682; rNsEucl=1074; rNSW=1071; rank_mean=924.200; match_rank= a 0 0 0 0 0 0 0 381 426 807 815 658 81 177 0 0 c 0 0 0 0 0 0 0 171 90 71 66 252 73 242 0 0 g 0 0 0 0 0 0 0 233 127 18 1 16 762 210 0 0 t 0 0 0 0 0 0 0 215 356 104 118 75 84 371 0 0
AT5G25475_UN0848.1_JASPAR_rc_shift9 (AT5G25475:UN0848.1:JASPAR_rc)	0.706	0.424	0.011	0.818	0.800	1051	986	1089	1086	1086	1059.600		; assembly_19 versus AT5G25475_UN0848.1_JASPAR_rc (AT5G25475:UN0848.1:JASPAR_rc); m=41/41; ncol2=6; w=0; offset=3; strand=R; shift=9; score= 1059.6; ---------CAAGCA- ; cor=0.706; Ncor=0.424; logoDP=0.011; NsEucl=0.818; NSW=0.800; rcor=1051; rNcor=986; rlogoDP=1089; rNsEucl=1086; rNSW=1086; rank_mean=1059.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 1000 1000 0 0 1000 0 c 0 0 0 0 0 0 0 0 0 899 0 0 0 1000 0 0 g 0 0 0 0 0 0 0 0 0 101 0 0 1000 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

One-to-n matrix alignment; reference matrix: assembly_11_shift6 ; 25 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
assembly_11_shift6 (assembly_11)
; assembly_11; m=0 (reference); ncol1=11; shift=6; ncol=17; ------wwAAACCGGww ; Alignment reference a 0 0 0 0 0 0 463 470 1294 1388 1377 122 63 126 213 566 461 c 0 0 0 0 0 0 351 332 21 13 23 1198 1267 60 52 179 253 g 0 0 0 0 0 0 206 228 75 23 19 41 38 1177 1104 198 250 t 0 0 0 0 0 0 427 417 57 23 28 86 79 84 78 504 483

AT1G76870_MA1367.1_JASPAR_shift3 (AT1G76870:MA1367.1:JASPAR) 0.924 0.726 5.513 0.949 0.972 76 62 294 38 50 104.000 22
; assembly_11 versus AT1G76870_MA1367.1_JASPAR (AT1G76870:MA1367.1:JASPAR); m=1/24; ncol2=14; w=-3; offset=-3; strand=D; shift=3; score= 104; ---awmywAAACCrsww ; cor=0.924; Ncor=0.726; logoDP=5.513; NsEucl=0.949; NSW=0.972; rcor=76; rNcor=62; rlogoDP=294; rNsEucl=38; rNSW=50; rank_mean=104.000; match_rank=22 a 0 0 0 209 218 173 87 287 436 418 448 6 0 175 41 177 229 c 0 0 0 94 64 127 173 21 5 0 6 450 452 4 150 71 46 g 0 0 0 53 59 65 73 3 5 2 0 0 0 257 222 53 35 t 0 0 0 100 115 91 123 145 10 36 2 0 4 20 43 155 146

MYB94_M1329_1.02_CISBP_rc_shift9 (MYB94:M1329_1.02:CISBP_rc) 0.844 0.614 4.894 0.898 0.917 282 291 407 636 452 413.600
; assembly_11 versus MYB94_M1329_1.02_CISBP_rc (MYB94:M1329_1.02:CISBP_rc); m=2/24; ncol2=8; w=0; offset=3; strand=R; shift=9; score= 413.6; ---------wACCGGTh ; cor=0.844; Ncor=0.614; logoDP=4.894; NsEucl=0.898; NSW=0.917; rcor=282; rNcor=291; rlogoDP=407; rNsEucl=636; rNSW=452; rank_mean=413.600; match_rank= a 0 0 0 0 0 0 0 0 0 40 99 0 0 0 0 0 33 c 0 0 0 0 0 0 0 0 0 0 0 100 100 1 1 0 33 g 0 0 0 0 0 0 0 0 0 20 1 0 0 99 99 1 0 t 0 0 0 0 0 0 0 0 0 40 0 0 0 0 0 99 34

Carub.0004s2803.1_LOBAS2_1_AT2G45420_EEAD0610_EEADannot_rc_shift1 (Carub.0004s2803.1_LOBAS2_1_AT2G45420:EEAD0610:EEADannot_rc) 0.834 0.522 2.013 0.923 0.940 328 634 745 188 182 415.400
; assembly_11 versus Carub.0004s2803.1_LOBAS2_1_AT2G45420_EEAD0610_EEADannot_rc (Carub.0004s2803.1_LOBAS2_1_AT2G45420:EEAD0610:EEADannot_rc); m=3/24; ncol2=15; w=-5; offset=-5; strand=R; shift=1; score= 415.4; -yCCGsmAAAaCCGsA- ; cor=0.834; Ncor=0.522; logoDP=2.013; NsEucl=0.923; NSW=0.940; rcor=328; rNcor=634; rlogoDP=745; rNsEucl=188; rNSW=182; rank_mean=415.400; match_rank= a 0 9 0 0 2 12 48 82 94 83 51 8 11 0 1 70 0 c 0 42 89 99 4 37 35 2 0 1 23 79 72 0 31 15 0 g 0 18 9 1 90 36 11 10 6 0 3 3 9 92 47 5 0 t 0 31 2 0 4 15 6 6 0 16 23 10 8 8 21 10 0

MYB101_MA1173.1_JASPAR_shift3 (MYB101:MA1173.1:JASPAR) 0.763 0.559 4.699 0.914 0.919 707 508 427 312 439 478.600
; assembly_11 versus MYB101_MA1173.1_JASPAR (MYB101:MA1173.1:JASPAR); m=4/24; ncol2=15; w=-3; offset=-3; strand=D; shift=3; score= 478.6; ---aamyrwAACCGwaw ; cor=0.763; Ncor=0.559; logoDP=4.699; NsEucl=0.914; NSW=0.919; rcor=707; rNcor=508; rlogoDP=427; rNsEucl=312; rNSW=439; rank_mean=478.600; match_rank= a 0 0 0 327 369 198 140 180 160 596 598 0 54 86 367 407 206 c 0 0 0 82 53 249 261 120 51 2 0 600 424 4 43 72 112 g 0 0 0 86 70 47 44 188 47 1 2 0 49 510 27 2 22 t 0 0 0 105 108 106 155 112 342 1 0 0 73 0 163 119 260

MYB101_MA1173.2_JASPAR_shift8 (MYB101:MA1173.2:JASPAR) 0.771 0.631 4.697 0.897 0.905 664 241 428 646 588 513.400
; assembly_11 versus MYB101_MA1173.2_JASPAR (MYB101:MA1173.2:JASPAR); m=5/24; ncol2=9; w=0; offset=2; strand=D; shift=8; score= 513.4; --------wAACCGwaw ; cor=0.771; Ncor=0.631; logoDP=4.697; NsEucl=0.897; NSW=0.905; rcor=664; rNcor=241; rlogoDP=428; rNsEucl=646; rNSW=588; rank_mean=513.400; match_rank= a 0 0 0 0 0 0 0 0 160 596 598 0 54 86 367 407 206 c 0 0 0 0 0 0 0 0 51 2 0 600 424 4 43 72 112 g 0 0 0 0 0 0 0 0 47 1 2 0 49 510 27 2 22 t 0 0 0 0 0 0 0 0 342 1 0 0 73 0 163 119 260

TRP5_MA1802.2_JASPAR_shift7 (TRP5:MA1802.2:JASPAR) 0.826 0.526 3.018 0.896 0.924 362 615 638 675 364 530.800
; assembly_11 versus TRP5_MA1802.2_JASPAR (TRP5:MA1802.2:JASPAR); m=6/24; ncol2=7; w=0; offset=1; strand=D; shift=7; score= 530.8; -------wAAACCy--- ; cor=0.826; Ncor=0.526; logoDP=3.018; NsEucl=0.896; NSW=0.924; rcor=362; rNcor=615; rlogoDP=638; rNsEucl=675; rNSW=364; rank_mean=530.800; match_rank= a 0 0 0 0 0 0 0 343 845 852 746 44 26 91 0 0 0 c 0 0 0 0 0 0 0 61 19 24 125 776 931 518 0 0 0 g 0 0 0 0 0 0 0 57 119 28 99 7 17 70 0 0 0 t 0 0 0 0 0 0 0 538 17 95 31 173 26 321 0 0 0

Solyc01g091420.2.1_LOBAS2_1_AT2G45420_EEAD0643_EEADannot_rc_shift0 (Solyc01g091420.2.1_LOBAS2_1_AT2G45420:EEAD0643:EEADannot_rc) 0.841 0.445 0.383 0.913 0.933 298 911 965 318 260 550.400
; assembly_11 versus Solyc01g091420.2.1_LOBAS2_1_AT2G45420_EEAD0643_EEADannot_rc (Solyc01g091420.2.1_LOBAS2_1_AT2G45420:EEAD0643:EEADannot_rc); m=7/24; ncol2=15; w=-6; offset=-6; strand=R; shift=0; score= 550.4; TyCCGsmAAAaCCGb-- ; cor=0.841; Ncor=0.445; logoDP=0.383; NsEucl=0.913; NSW=0.933; rcor=298; rNcor=911; rlogoDP=965; rNsEucl=318; rNSW=260; rank_mean=550.400; match_rank= a 5 9 1 2 0 7 34 91 99 88 66 16 0 1 3 0 0 c 12 53 96 98 9 53 51 2 0 2 17 77 90 0 33 0 0 g 3 6 1 0 90 26 7 7 0 0 1 2 1 97 29 0 0 t 80 32 2 0 1 14 8 0 1 10 16 5 9 2 35 0 0

TRP5_MA1802.1_JASPAR_shift5 (TRP5:MA1802.1:JASPAR) 0.744 0.558 3.026 0.898 0.907 796 509 637 634 566 628.400
; assembly_11 versus TRP5_MA1802.1_JASPAR (TRP5:MA1802.1:JASPAR); m=8/24; ncol2=10; w=-1; offset=-1; strand=D; shift=5; score= 628.4; -----swwAAACCyy-- ; cor=0.744; Ncor=0.558; logoDP=3.026; NsEucl=0.898; NSW=0.907; rcor=796; rNcor=509; rlogoDP=637; rNsEucl=634; rNSW=566; rank_mean=628.400; match_rank= a 0 0 0 0 0 190 303.26 343 845 852 745.83 44 26 91 191 0 0 c 0 0 0 0 0 351 239 61 19 24 125 776 931 518 334 0 0 g 0 0 0 0 0 281.34 109 57 119 28 99 7.35 17 70.135 109 0 0 t 0 0 0 0 0 178 349 538 17 95 31 173 26 321 366 0 0

AT4G00390_UN0392.2_JASPAR_shift10 (AT4G00390:UN0392.2:JASPAR) 0.803 0.511 2.976 0.882 0.903 487 676 643 871 614 658.200
; assembly_11 versus AT4G00390_UN0392.2_JASPAR (AT4G00390:UN0392.2:JASPAR); m=9/24; ncol2=7; w=0; offset=4; strand=D; shift=10; score= 658.2; ----------aCCGGTC ; cor=0.803; Ncor=0.511; logoDP=2.976; NsEucl=0.882; NSW=0.903; rcor=487; rNcor=676; rlogoDP=643; rNsEucl=871; rNSW=614; rank_mean=658.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 679 25 25 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 75 924 924 0 86 99 914 g 0 0 0 0 0 0 0 0 0 0 171 25 25 1000 914 86 86 t 0 0 0 0 0 0 0 0 0 0 75 25 25 0 0 815 0

CDM1.ampDAP_M0342_AthalianaCistrome_shift2 (CDM1.ampDAP:M0342:AthalianaCistrome) 0.713 0.523 3.166 0.906 0.903 993 630 624 466 611 664.800
; assembly_11 versus CDM1.ampDAP_M0342_AthalianaCistrome (CDM1.ampDAP:M0342:AthalianaCistrome); m=10/24; ncol2=15; w=-4; offset=-4; strand=D; shift=2; score= 664.8; --CCGAaAAwwTCGGar ; cor=0.713; Ncor=0.523; logoDP=3.166; NsEucl=0.906; NSW=0.903; rcor=993; rNcor=630; rlogoDP=624; rNsEucl=466; rNSW=611; rank_mean=664.800; match_rank= a 0 0 15 1 1 524 322 521 556 350 240 53 53 0 2 318 212 c 0 0 455 598 0 5 64 8 1 22 97 103 546 0 92 50 74 g 0 0 125 0 564 45 96 27 11 31 100 30 0 599 497 120 177 t 0 0 4 0 34 25 117 43 31 196 162 413 0 0 8 111 136

MYB70_MA1393.2_JASPAR_shift7 (MYB70:MA1393.2:JASPAR) 0.713 0.594 4.207 0.893 0.885 994 369 483 730 804 676.000
; assembly_11 versus MYB70_MA1393.2_JASPAR (MYB70:MA1393.2:JASPAR); m=11/24; ncol2=11; w=0; offset=1; strand=D; shift=7; score= 676; -------wtAACCGTTw ; cor=0.713; Ncor=0.594; logoDP=4.207; NsEucl=0.893; NSW=0.885; rcor=994; rNcor=369; rlogoDP=483; rNsEucl=730; rNSW=804; rank_mean=676.000; match_rank= a 0 0 0 0 0 0 0 671 454 1560 1708 0 66 18 137 164 814 c 0 0 0 0 0 0 0 278 299 29 7 1848 1736 1 112 95 179 g 0 0 0 0 0 0 0 309 181 116 100 6 0 1849 71 19 377 t 0 0 0 0 0 0 0 612 936 165 55 16 68 2 1550 1592 500

LBD19.DAP_M0467_AthalianaCistrome_shift2 (LBD19.DAP:M0467:AthalianaCistrome) 0.705 0.517 2.593 0.907 0.905 1062 657 706 452 592 693.800
; assembly_11 versus LBD19.DAP_M0467_AthalianaCistrome (LBD19.DAP:M0467:AthalianaCistrome); m=12/24; ncol2=15; w=-4; offset=-4; strand=D; shift=2; score= 693.8; --CCggAAAwtccGGar ; cor=0.705; Ncor=0.517; logoDP=2.593; NsEucl=0.907; NSW=0.905; rcor=1062; rNcor=657; rlogoDP=706; rNsEucl=452; rNSW=592; rank_mean=693.800; match_rank= a 0 0 15 11 68 45 434 475 542 400 86 105 107 0 7 277 209 c 0 0 447 586 47 70 3 0 5 17 139 395 376 0 140 123 40 g 0 0 129 3 376 378 129 79 26 11 43 69 26 595 430 93 226 t 0 0 9 0 109 107 34 46 27 172 332 31 91 5 23 107 125

LBD16_UN0868.1_JASPAR_rc_shift2 (LBD16:UN0868.1:JASPAR_rc) 0.759 0.455 1.323 0.900 0.910 719 870 805 594 522 702.000
; assembly_11 versus LBD16_UN0868.1_JASPAR_rc (LBD16:UN0868.1:JASPAR_rc); m=13/24; ncol2=13; w=-4; offset=-4; strand=R; shift=2; score= 702; --SCggAAAAtccGs-- ; cor=0.759; Ncor=0.455; logoDP=1.323; NsEucl=0.900; NSW=0.910; rcor=719; rNcor=870; rlogoDP=805; rNsEucl=594; rNSW=522; rank_mean=702.000; match_rank= a 0 0 36 26 103 85 680 745 900 721 240 176 165 0 5 0 0 c 0 0 693 973 115 190 71 8 15 48 228 566 636 1 261 0 0 g 0 0 256 0 641 515 183 153 73 0 95 178 41 976 673 0 0 t 0 0 13 0 140 210 65 93 11 230 436 78 156 21 60 0 0

AT3G10580.ampDAP_M0606_AthalianaCistrome_shift2 (AT3G10580.ampDAP:M0606:AthalianaCistrome) 0.705 0.517 3.248 0.903 0.897 1059 656 615 524 672 705.200
; assembly_11 versus AT3G10580.ampDAP_M0606_AthalianaCistrome (AT3G10580.ampDAP:M0606:AthalianaCistrome); m=14/24; ncol2=15; w=-4; offset=-4; strand=D; shift=2; score= 705.2; --CCGAaAAwwTCGGar ; cor=0.705; Ncor=0.517; logoDP=3.248; NsEucl=0.903; NSW=0.897; rcor=1059; rNcor=656; rlogoDP=615; rNsEucl=524; rNSW=672; rank_mean=705.200; match_rank= a 0 0 12 0 0 328 225 337 347 217 155 28 26 0 0 201 130 c 0 0 300 377 0 3 31 4 2 16 56 66 351 0 49 26 40 g 0 0 65 0 356 28 50 15 7 15 61 13 0 377 324 85 114 t 0 0 0 0 21 18 71 21 21 129 105 270 0 0 4 65 93

MYB70_MA1393.3_JASPAR_shift9 (MYB70:MA1393.3:JASPAR) 0.783 0.498 4.164 0.872 0.885 593 719 493 962 800 713.400
; assembly_11 versus MYB70_MA1393.3_JASPAR (MYB70:MA1393.3:JASPAR); m=15/24; ncol2=7; w=0; offset=3; strand=D; shift=9; score= 713.4; ---------AACCGTT- ; cor=0.783; Ncor=0.498; logoDP=4.164; NsEucl=0.872; NSW=0.885; rcor=593; rNcor=719; rlogoDP=493; rNsEucl=962; rNSW=800; rank_mean=713.400; match_rank= a 0 0 0 0 0 0 0 0 0 1560 1708 0 66 18 137 164 0 c 0 0 0 0 0 0 0 0 0 29 7 1848 1736 1 112 95 0 g 0 0 0 0 0 0 0 0 0 116 100 6 0 1849 71 19 0 t 0 0 0 0 0 0 0 0 0 165 55 16 68 2 1550 1592 0

AL4G44590.t1_LOBAS2_1_AT2G45420_EEAD0589_EEADannot_shift2 (AL4G44590.t1_LOBAS2_1_AT2G45420:EEAD0589:EEADannot) 0.740 0.479 5.874 0.889 0.865 816 789 242 787 968 720.400
; assembly_11 versus AL4G44590.t1_LOBAS2_1_AT2G45420_EEAD0589_EEADannot (AL4G44590.t1_LOBAS2_1_AT2G45420:EEAD0589:EEADannot); m=16/24; ncol2=17; w=-4; offset=-4; strand=D; shift=2; score= 720.4; --CCGCCAAAACCGyAA ; cor=0.740; Ncor=0.479; logoDP=5.874; NsEucl=0.889; NSW=0.865; rcor=816; rNcor=789; rlogoDP=242; rNsEucl=787; rNSW=968; rank_mean=720.400; match_rank= a 0 0 0 0 1 3 12 97 100 100 92 11 2 2 3 100 98 c 0 0 100 98 2 77 77 3 0 0 8 84 94 0 43 0 0 g 0 0 0 0 95 6 3 0 0 0 0 0 1 96 6 0 2 t 0 0 0 2 2 14 8 0 0 0 0 5 3 2 48 0 0

TATA-box-binding_6njq_A_3D-footprint_rc_shift5 (TATA-box-binding:6njq_A:3D-footprint_rc) 0.826 0.413 0.539 0.883 0.918 364 1027 937 857 445 726.000
; assembly_11 versus TATA-box-binding_6njq_A_3D-footprint_rc (TATA-box-binding:6njq_A:3D-footprint_rc); m=17/24; ncol2=7; w=-1; offset=-1; strand=R; shift=5; score= 726; -----TATAAAC----- ; cor=0.826; Ncor=0.413; logoDP=0.539; NsEucl=0.883; NSW=0.918; rcor=364; rNcor=1027; rlogoDP=937; rNsEucl=857; rNSW=445; rank_mean=726.000; match_rank= a 0 0 0 0 0 0 96 9 96 96 67 9 0 0 0 0 0 c 0 0 0 0 0 0 0 11 0 0 9 69 0 0 0 0 0 g 0 0 0 0 0 0 0 9 0 0 9 9 0 0 0 0 0 t 0 0 0 0 0 96 0 67 0 0 11 9 0 0 0 0 0

C3H15_UN0833.1_JASPAR_shift2 (C3H15:UN0833.1:JASPAR) 0.715 0.476 3.178 0.897 0.894 979 796 623 647 699 748.800
; assembly_11 versus C3H15_UN0833.1_JASPAR (C3H15:UN0833.1:JASPAR); m=18/24; ncol2=14; w=-4; offset=-4; strand=D; shift=2; score= 748.8; --CCGAaAAwwTCGGa- ; cor=0.715; Ncor=0.476; logoDP=3.178; NsEucl=0.897; NSW=0.894; rcor=979; rNcor=796; rlogoDP=623; rNsEucl=647; rNSW=699; rank_mean=748.800; match_rank= a 0 0 25 1 1 874 537 869 928 584 400 88 88 0 3 530 0 c 0 0 759 998 0 8 106 13 1 36 161 171 911 0 153 83 0 g 0 0 208 0 941 75 160 45 18 51 166 50 0 1000 829 200 0 t 0 0 6 0 56 41 195 71 51 327 270 689 0 0 13 185 0

OsWRKY45_6ir8_A_3D-footprint_shift6 (OsWRKY45:6ir8_A:3D-footprint) 0.736 0.468 2.926 0.883 0.904 849 831 652 858 602 758.400
; assembly_11 versus OsWRKY45_6ir8_A_3D-footprint (OsWRKY45:6ir8_A:3D-footprint); m=19/24; ncol2=7; w=0; offset=0; strand=D; shift=6; score= 758.4; ------tnnnACC---- ; cor=0.736; Ncor=0.468; logoDP=2.926; NsEucl=0.883; NSW=0.904; rcor=849; rNcor=831; rlogoDP=652; rNsEucl=858; rNSW=602; rank_mean=758.400; match_rank= a 0 0 0 0 0 0 19 24 24 24 96 0 0 0 0 0 0 c 0 0 0 0 0 0 19 24 24 24 0 96 77 0 0 0 0 g 0 0 0 0 0 0 19 24 24 24 0 0 0 0 0 0 0 t 0 0 0 0 0 0 39 24 24 24 0 0 19 0 0 0 0

OsMYB44_UN0824.1_JASPAR_rc_shift9 (OsMYB44:UN0824.1:JASPAR_rc) 0.709 0.515 3.806 0.874 0.873 1036 662 546 949 910 820.600
; assembly_11 versus OsMYB44_UN0824.1_JASPAR_rc (OsMYB44:UN0824.1:JASPAR_rc); m=20/24; ncol2=8; w=0; offset=3; strand=R; shift=9; score= 820.6; ---------gACMGkTA ; cor=0.709; Ncor=0.515; logoDP=3.806; NsEucl=0.874; NSW=0.873; rcor=1036; rNcor=662; rlogoDP=546; rNsEucl=949; rNSW=910; rank_mean=820.600; match_rank= a 0 0 0 0 0 0 0 0 0 240 895 0 299 0 0 0 768 c 0 0 0 0 0 0 0 0 0 51 0 895 699 0 0 0 41 g 0 0 0 0 0 0 0 0 0 536 104 0 0 999 616 0 41 t 0 0 0 0 0 0 0 0 0 171 0 104 0 0 383 999 149

LBD19_UN0869.1_JASPAR_shift2 (LBD19:UN0869.1:JASPAR) 0.712 0.427 2.595 0.889 0.890 998 964 705 783 759 841.800
; assembly_11 versus LBD19_UN0869.1_JASPAR (LBD19:UN0869.1:JASPAR); m=21/24; ncol2=13; w=-4; offset=-4; strand=D; shift=2; score= 841.8; --CCggAAAwtccGG-- ; cor=0.712; Ncor=0.427; logoDP=2.595; NsEucl=0.889; NSW=0.890; rcor=998; rNcor=964; rlogoDP=705; rNsEucl=783; rNSW=759; rank_mean=841.800; match_rank= a 0 0 25 18 113 75 723 791 903 666 143 175 178 0 11 0 0 c 0 0 745 976 78 116 5 0 8 28 231 658 626 0 233 0 0 g 0 0 215 5 626 630 215 131 43 18 71 115 43 991 716 0 0 t 0 0 15 0 181 178 56 76 45 286 553 51 151 8 38 0 0

Solyc07g040920.2.1_MYBRELATED_1_AT1G72740_EEAD0654_EEADannot_shift3 (Solyc07g040920.2.1_MYBRELATED_1_AT1G72740:EEAD0654:EEADannot) 0.709 0.405 4.458 0.867 0.858 1028 1061 456 986 1009 908.000
; assembly_11 versus Solyc07g040920.2.1_MYBRELATED_1_AT1G72740_EEAD0654_EEADannot (Solyc07g040920.2.1_MYBRELATED_1_AT1G72740:EEAD0654:EEADannot); m=22/24; ncol2=11; w=-3; offset=-3; strand=D; shift=3; score= 908; ---ACCCTAAACCC--- ; cor=0.709; Ncor=0.405; logoDP=4.458; NsEucl=0.867; NSW=0.858; rcor=1028; rNcor=1061; rlogoDP=456; rNsEucl=986; rNSW=1009; rank_mean=908.000; match_rank= a 0 0 0 97 8 4 3 6 96 99 92 5 4 7 0 0 0 c 0 0 0 1 84 86 93 6 0 0 5 77 85 77 0 0 0 g 0 0 0 0 1 4 0 1 0 1 0 2 1 3 0 0 0 t 0 0 0 2 7 6 4 87 4 0 3 16 10 13 0 0 0

XP_013589913.1_MYBRELATED_1_AT1G72740_EEAD0665_EEADannot_shift3 (XP_013589913.1_MYBRELATED_1_AT1G72740:EEAD0665:EEADannot) 0.704 0.402 4.389 0.866 0.855 1064 1073 463 1001 1025 925.200
; assembly_11 versus XP_013589913.1_MYBRELATED_1_AT1G72740_EEAD0665_EEADannot (XP_013589913.1_MYBRELATED_1_AT1G72740:EEAD0665:EEADannot); m=23/24; ncol2=11; w=-3; offset=-3; strand=D; shift=3; score= 925.2; ---ACCCTAAACCC--- ; cor=0.704; Ncor=0.402; logoDP=4.389; NsEucl=0.866; NSW=0.855; rcor=1064; rNcor=1073; rlogoDP=463; rNsEucl=1001; rNSW=1025; rank_mean=925.200; match_rank= a 0 0 0 97 7 4 3 6 94 99 92 6 5 10 0 0 0 c 0 0 0 0 86 84 90 2 0 1 4 77 85 78 0 0 0 g 0 0 0 1 1 5 1 1 0 0 0 1 1 2 0 0 0 t 0 0 0 2 6 7 6 91 6 0 4 16 9 10 0 0 0

AtGRP7iCLIP_EEAD0145_EEADannot_rc_shift6 (AtGRP7iCLIP:EEAD0145:EEADannot_rc) 0.701 0.446 0.446 0.873 0.887 1084 908 953 954 785 936.800
; assembly_11 versus AtGRP7iCLIP_EEAD0145_EEADannot_rc (AtGRP7iCLIP:EEAD0145:EEADannot_rc); m=24/24; ncol2=7; w=0; offset=0; strand=R; shift=6; score= 936.8; ------aGAAACa---- ; cor=0.701; Ncor=0.446; logoDP=0.446; NsEucl=0.873; NSW=0.887; rcor=1084; rNcor=908; rlogoDP=953; rNsEucl=954; rNSW=785; rank_mean=936.800; match_rank= a 0 0 0 0 0 0 55 4 97 77 77 8 60 0 0 0 0 c 0 0 0 0 0 0 20 19 1 0 1 77 8 0 0 0 0 g 0 0 0 0 0 0 13 68 0 11 17 0 15 0 0 0 0 t 0 0 0 0 0 0 12 9 2 12 5 15 17 0 0 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	match_rank	Aligned matrices
assembly_11_shift6 (assembly_11)													; assembly_11; m=0 (reference); ncol1=11; shift=6; ncol=17; ------wwAAACCGGww ; Alignment reference a 0 0 0 0 0 0 463 470 1294 1388 1377 122 63 126 213 566 461 c 0 0 0 0 0 0 351 332 21 13 23 1198 1267 60 52 179 253 g 0 0 0 0 0 0 206 228 75 23 19 41 38 1177 1104 198 250 t 0 0 0 0 0 0 427 417 57 23 28 86 79 84 78 504 483
AT1G76870_MA1367.1_JASPAR_shift3 (AT1G76870:MA1367.1:JASPAR)	0.924	0.726	5.513	0.949	0.972	76	62	294	38	50	104.000	22	; assembly_11 versus AT1G76870_MA1367.1_JASPAR (AT1G76870:MA1367.1:JASPAR); m=1/24; ncol2=14; w=-3; offset=-3; strand=D; shift=3; score= 104; ---awmywAAACCrsww ; cor=0.924; Ncor=0.726; logoDP=5.513; NsEucl=0.949; NSW=0.972; rcor=76; rNcor=62; rlogoDP=294; rNsEucl=38; rNSW=50; rank_mean=104.000; match_rank=22 a 0 0 0 209 218 173 87 287 436 418 448 6 0 175 41 177 229 c 0 0 0 94 64 127 173 21 5 0 6 450 452 4 150 71 46 g 0 0 0 53 59 65 73 3 5 2 0 0 0 257 222 53 35 t 0 0 0 100 115 91 123 145 10 36 2 0 4 20 43 155 146
MYB94_M1329_1.02_CISBP_rc_shift9 (MYB94:M1329_1.02:CISBP_rc)	0.844	0.614	4.894	0.898	0.917	282	291	407	636	452	413.600		; assembly_11 versus MYB94_M1329_1.02_CISBP_rc (MYB94:M1329_1.02:CISBP_rc); m=2/24; ncol2=8; w=0; offset=3; strand=R; shift=9; score= 413.6; ---------wACCGGTh ; cor=0.844; Ncor=0.614; logoDP=4.894; NsEucl=0.898; NSW=0.917; rcor=282; rNcor=291; rlogoDP=407; rNsEucl=636; rNSW=452; rank_mean=413.600; match_rank= a 0 0 0 0 0 0 0 0 0 40 99 0 0 0 0 0 33 c 0 0 0 0 0 0 0 0 0 0 0 100 100 1 1 0 33 g 0 0 0 0 0 0 0 0 0 20 1 0 0 99 99 1 0 t 0 0 0 0 0 0 0 0 0 40 0 0 0 0 0 99 34
Carub.0004s2803.1_LOBAS2_1_AT2G45420_EEAD0610_EEADannot_rc_shift1 (Carub.0004s2803.1_LOBAS2_1_AT2G45420:EEAD0610:EEADannot_rc)	0.834	0.522	2.013	0.923	0.940	328	634	745	188	182	415.400		; assembly_11 versus Carub.0004s2803.1_LOBAS2_1_AT2G45420_EEAD0610_EEADannot_rc (Carub.0004s2803.1_LOBAS2_1_AT2G45420:EEAD0610:EEADannot_rc); m=3/24; ncol2=15; w=-5; offset=-5; strand=R; shift=1; score= 415.4; -yCCGsmAAAaCCGsA- ; cor=0.834; Ncor=0.522; logoDP=2.013; NsEucl=0.923; NSW=0.940; rcor=328; rNcor=634; rlogoDP=745; rNsEucl=188; rNSW=182; rank_mean=415.400; match_rank= a 0 9 0 0 2 12 48 82 94 83 51 8 11 0 1 70 0 c 0 42 89 99 4 37 35 2 0 1 23 79 72 0 31 15 0 g 0 18 9 1 90 36 11 10 6 0 3 3 9 92 47 5 0 t 0 31 2 0 4 15 6 6 0 16 23 10 8 8 21 10 0
MYB101_MA1173.1_JASPAR_shift3 (MYB101:MA1173.1:JASPAR)	0.763	0.559	4.699	0.914	0.919	707	508	427	312	439	478.600		; assembly_11 versus MYB101_MA1173.1_JASPAR (MYB101:MA1173.1:JASPAR); m=4/24; ncol2=15; w=-3; offset=-3; strand=D; shift=3; score= 478.6; ---aamyrwAACCGwaw ; cor=0.763; Ncor=0.559; logoDP=4.699; NsEucl=0.914; NSW=0.919; rcor=707; rNcor=508; rlogoDP=427; rNsEucl=312; rNSW=439; rank_mean=478.600; match_rank= a 0 0 0 327 369 198 140 180 160 596 598 0 54 86 367 407 206 c 0 0 0 82 53 249 261 120 51 2 0 600 424 4 43 72 112 g 0 0 0 86 70 47 44 188 47 1 2 0 49 510 27 2 22 t 0 0 0 105 108 106 155 112 342 1 0 0 73 0 163 119 260
MYB101_MA1173.2_JASPAR_shift8 (MYB101:MA1173.2:JASPAR)	0.771	0.631	4.697	0.897	0.905	664	241	428	646	588	513.400		; assembly_11 versus MYB101_MA1173.2_JASPAR (MYB101:MA1173.2:JASPAR); m=5/24; ncol2=9; w=0; offset=2; strand=D; shift=8; score= 513.4; --------wAACCGwaw ; cor=0.771; Ncor=0.631; logoDP=4.697; NsEucl=0.897; NSW=0.905; rcor=664; rNcor=241; rlogoDP=428; rNsEucl=646; rNSW=588; rank_mean=513.400; match_rank= a 0 0 0 0 0 0 0 0 160 596 598 0 54 86 367 407 206 c 0 0 0 0 0 0 0 0 51 2 0 600 424 4 43 72 112 g 0 0 0 0 0 0 0 0 47 1 2 0 49 510 27 2 22 t 0 0 0 0 0 0 0 0 342 1 0 0 73 0 163 119 260
TRP5_MA1802.2_JASPAR_shift7 (TRP5:MA1802.2:JASPAR)	0.826	0.526	3.018	0.896	0.924	362	615	638	675	364	530.800		; assembly_11 versus TRP5_MA1802.2_JASPAR (TRP5:MA1802.2:JASPAR); m=6/24; ncol2=7; w=0; offset=1; strand=D; shift=7; score= 530.8; -------wAAACCy--- ; cor=0.826; Ncor=0.526; logoDP=3.018; NsEucl=0.896; NSW=0.924; rcor=362; rNcor=615; rlogoDP=638; rNsEucl=675; rNSW=364; rank_mean=530.800; match_rank= a 0 0 0 0 0 0 0 343 845 852 746 44 26 91 0 0 0 c 0 0 0 0 0 0 0 61 19 24 125 776 931 518 0 0 0 g 0 0 0 0 0 0 0 57 119 28 99 7 17 70 0 0 0 t 0 0 0 0 0 0 0 538 17 95 31 173 26 321 0 0 0
Solyc01g091420.2.1_LOBAS2_1_AT2G45420_EEAD0643_EEADannot_rc_shift0 (Solyc01g091420.2.1_LOBAS2_1_AT2G45420:EEAD0643:EEADannot_rc)	0.841	0.445	0.383	0.913	0.933	298	911	965	318	260	550.400		; assembly_11 versus Solyc01g091420.2.1_LOBAS2_1_AT2G45420_EEAD0643_EEADannot_rc (Solyc01g091420.2.1_LOBAS2_1_AT2G45420:EEAD0643:EEADannot_rc); m=7/24; ncol2=15; w=-6; offset=-6; strand=R; shift=0; score= 550.4; TyCCGsmAAAaCCGb-- ; cor=0.841; Ncor=0.445; logoDP=0.383; NsEucl=0.913; NSW=0.933; rcor=298; rNcor=911; rlogoDP=965; rNsEucl=318; rNSW=260; rank_mean=550.400; match_rank= a 5 9 1 2 0 7 34 91 99 88 66 16 0 1 3 0 0 c 12 53 96 98 9 53 51 2 0 2 17 77 90 0 33 0 0 g 3 6 1 0 90 26 7 7 0 0 1 2 1 97 29 0 0 t 80 32 2 0 1 14 8 0 1 10 16 5 9 2 35 0 0
TRP5_MA1802.1_JASPAR_shift5 (TRP5:MA1802.1:JASPAR)	0.744	0.558	3.026	0.898	0.907	796	509	637	634	566	628.400		; assembly_11 versus TRP5_MA1802.1_JASPAR (TRP5:MA1802.1:JASPAR); m=8/24; ncol2=10; w=-1; offset=-1; strand=D; shift=5; score= 628.4; -----swwAAACCyy-- ; cor=0.744; Ncor=0.558; logoDP=3.026; NsEucl=0.898; NSW=0.907; rcor=796; rNcor=509; rlogoDP=637; rNsEucl=634; rNSW=566; rank_mean=628.400; match_rank= a 0 0 0 0 0 190 303.26 343 845 852 745.83 44 26 91 191 0 0 c 0 0 0 0 0 351 239 61 19 24 125 776 931 518 334 0 0 g 0 0 0 0 0 281.34 109 57 119 28 99 7.35 17 70.135 109 0 0 t 0 0 0 0 0 178 349 538 17 95 31 173 26 321 366 0 0
AT4G00390_UN0392.2_JASPAR_shift10 (AT4G00390:UN0392.2:JASPAR)	0.803	0.511	2.976	0.882	0.903	487	676	643	871	614	658.200		; assembly_11 versus AT4G00390_UN0392.2_JASPAR (AT4G00390:UN0392.2:JASPAR); m=9/24; ncol2=7; w=0; offset=4; strand=D; shift=10; score= 658.2; ----------aCCGGTC ; cor=0.803; Ncor=0.511; logoDP=2.976; NsEucl=0.882; NSW=0.903; rcor=487; rNcor=676; rlogoDP=643; rNsEucl=871; rNSW=614; rank_mean=658.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 679 25 25 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 75 924 924 0 86 99 914 g 0 0 0 0 0 0 0 0 0 0 171 25 25 1000 914 86 86 t 0 0 0 0 0 0 0 0 0 0 75 25 25 0 0 815 0
CDM1.ampDAP_M0342_AthalianaCistrome_shift2 (CDM1.ampDAP:M0342:AthalianaCistrome)	0.713	0.523	3.166	0.906	0.903	993	630	624	466	611	664.800		; assembly_11 versus CDM1.ampDAP_M0342_AthalianaCistrome (CDM1.ampDAP:M0342:AthalianaCistrome); m=10/24; ncol2=15; w=-4; offset=-4; strand=D; shift=2; score= 664.8; --CCGAaAAwwTCGGar ; cor=0.713; Ncor=0.523; logoDP=3.166; NsEucl=0.906; NSW=0.903; rcor=993; rNcor=630; rlogoDP=624; rNsEucl=466; rNSW=611; rank_mean=664.800; match_rank= a 0 0 15 1 1 524 322 521 556 350 240 53 53 0 2 318 212 c 0 0 455 598 0 5 64 8 1 22 97 103 546 0 92 50 74 g 0 0 125 0 564 45 96 27 11 31 100 30 0 599 497 120 177 t 0 0 4 0 34 25 117 43 31 196 162 413 0 0 8 111 136
MYB70_MA1393.2_JASPAR_shift7 (MYB70:MA1393.2:JASPAR)	0.713	0.594	4.207	0.893	0.885	994	369	483	730	804	676.000		; assembly_11 versus MYB70_MA1393.2_JASPAR (MYB70:MA1393.2:JASPAR); m=11/24; ncol2=11; w=0; offset=1; strand=D; shift=7; score= 676; -------wtAACCGTTw ; cor=0.713; Ncor=0.594; logoDP=4.207; NsEucl=0.893; NSW=0.885; rcor=994; rNcor=369; rlogoDP=483; rNsEucl=730; rNSW=804; rank_mean=676.000; match_rank= a 0 0 0 0 0 0 0 671 454 1560 1708 0 66 18 137 164 814 c 0 0 0 0 0 0 0 278 299 29 7 1848 1736 1 112 95 179 g 0 0 0 0 0 0 0 309 181 116 100 6 0 1849 71 19 377 t 0 0 0 0 0 0 0 612 936 165 55 16 68 2 1550 1592 500
LBD19.DAP_M0467_AthalianaCistrome_shift2 (LBD19.DAP:M0467:AthalianaCistrome)	0.705	0.517	2.593	0.907	0.905	1062	657	706	452	592	693.800		; assembly_11 versus LBD19.DAP_M0467_AthalianaCistrome (LBD19.DAP:M0467:AthalianaCistrome); m=12/24; ncol2=15; w=-4; offset=-4; strand=D; shift=2; score= 693.8; --CCggAAAwtccGGar ; cor=0.705; Ncor=0.517; logoDP=2.593; NsEucl=0.907; NSW=0.905; rcor=1062; rNcor=657; rlogoDP=706; rNsEucl=452; rNSW=592; rank_mean=693.800; match_rank= a 0 0 15 11 68 45 434 475 542 400 86 105 107 0 7 277 209 c 0 0 447 586 47 70 3 0 5 17 139 395 376 0 140 123 40 g 0 0 129 3 376 378 129 79 26 11 43 69 26 595 430 93 226 t 0 0 9 0 109 107 34 46 27 172 332 31 91 5 23 107 125
LBD16_UN0868.1_JASPAR_rc_shift2 (LBD16:UN0868.1:JASPAR_rc)	0.759	0.455	1.323	0.900	0.910	719	870	805	594	522	702.000		; assembly_11 versus LBD16_UN0868.1_JASPAR_rc (LBD16:UN0868.1:JASPAR_rc); m=13/24; ncol2=13; w=-4; offset=-4; strand=R; shift=2; score= 702; --SCggAAAAtccGs-- ; cor=0.759; Ncor=0.455; logoDP=1.323; NsEucl=0.900; NSW=0.910; rcor=719; rNcor=870; rlogoDP=805; rNsEucl=594; rNSW=522; rank_mean=702.000; match_rank= a 0 0 36 26 103 85 680 745 900 721 240 176 165 0 5 0 0 c 0 0 693 973 115 190 71 8 15 48 228 566 636 1 261 0 0 g 0 0 256 0 641 515 183 153 73 0 95 178 41 976 673 0 0 t 0 0 13 0 140 210 65 93 11 230 436 78 156 21 60 0 0
AT3G10580.ampDAP_M0606_AthalianaCistrome_shift2 (AT3G10580.ampDAP:M0606:AthalianaCistrome)	0.705	0.517	3.248	0.903	0.897	1059	656	615	524	672	705.200		; assembly_11 versus AT3G10580.ampDAP_M0606_AthalianaCistrome (AT3G10580.ampDAP:M0606:AthalianaCistrome); m=14/24; ncol2=15; w=-4; offset=-4; strand=D; shift=2; score= 705.2; --CCGAaAAwwTCGGar ; cor=0.705; Ncor=0.517; logoDP=3.248; NsEucl=0.903; NSW=0.897; rcor=1059; rNcor=656; rlogoDP=615; rNsEucl=524; rNSW=672; rank_mean=705.200; match_rank= a 0 0 12 0 0 328 225 337 347 217 155 28 26 0 0 201 130 c 0 0 300 377 0 3 31 4 2 16 56 66 351 0 49 26 40 g 0 0 65 0 356 28 50 15 7 15 61 13 0 377 324 85 114 t 0 0 0 0 21 18 71 21 21 129 105 270 0 0 4 65 93
MYB70_MA1393.3_JASPAR_shift9 (MYB70:MA1393.3:JASPAR)	0.783	0.498	4.164	0.872	0.885	593	719	493	962	800	713.400		; assembly_11 versus MYB70_MA1393.3_JASPAR (MYB70:MA1393.3:JASPAR); m=15/24; ncol2=7; w=0; offset=3; strand=D; shift=9; score= 713.4; ---------AACCGTT- ; cor=0.783; Ncor=0.498; logoDP=4.164; NsEucl=0.872; NSW=0.885; rcor=593; rNcor=719; rlogoDP=493; rNsEucl=962; rNSW=800; rank_mean=713.400; match_rank= a 0 0 0 0 0 0 0 0 0 1560 1708 0 66 18 137 164 0 c 0 0 0 0 0 0 0 0 0 29 7 1848 1736 1 112 95 0 g 0 0 0 0 0 0 0 0 0 116 100 6 0 1849 71 19 0 t 0 0 0 0 0 0 0 0 0 165 55 16 68 2 1550 1592 0
AL4G44590.t1_LOBAS2_1_AT2G45420_EEAD0589_EEADannot_shift2 (AL4G44590.t1_LOBAS2_1_AT2G45420:EEAD0589:EEADannot)	0.740	0.479	5.874	0.889	0.865	816	789	242	787	968	720.400		; assembly_11 versus AL4G44590.t1_LOBAS2_1_AT2G45420_EEAD0589_EEADannot (AL4G44590.t1_LOBAS2_1_AT2G45420:EEAD0589:EEADannot); m=16/24; ncol2=17; w=-4; offset=-4; strand=D; shift=2; score= 720.4; --CCGCCAAAACCGyAA ; cor=0.740; Ncor=0.479; logoDP=5.874; NsEucl=0.889; NSW=0.865; rcor=816; rNcor=789; rlogoDP=242; rNsEucl=787; rNSW=968; rank_mean=720.400; match_rank= a 0 0 0 0 1 3 12 97 100 100 92 11 2 2 3 100 98 c 0 0 100 98 2 77 77 3 0 0 8 84 94 0 43 0 0 g 0 0 0 0 95 6 3 0 0 0 0 0 1 96 6 0 2 t 0 0 0 2 2 14 8 0 0 0 0 5 3 2 48 0 0
TATA-box-binding_6njq_A_3D-footprint_rc_shift5 (TATA-box-binding:6njq_A:3D-footprint_rc)	0.826	0.413	0.539	0.883	0.918	364	1027	937	857	445	726.000		; assembly_11 versus TATA-box-binding_6njq_A_3D-footprint_rc (TATA-box-binding:6njq_A:3D-footprint_rc); m=17/24; ncol2=7; w=-1; offset=-1; strand=R; shift=5; score= 726; -----TATAAAC----- ; cor=0.826; Ncor=0.413; logoDP=0.539; NsEucl=0.883; NSW=0.918; rcor=364; rNcor=1027; rlogoDP=937; rNsEucl=857; rNSW=445; rank_mean=726.000; match_rank= a 0 0 0 0 0 0 96 9 96 96 67 9 0 0 0 0 0 c 0 0 0 0 0 0 0 11 0 0 9 69 0 0 0 0 0 g 0 0 0 0 0 0 0 9 0 0 9 9 0 0 0 0 0 t 0 0 0 0 0 96 0 67 0 0 11 9 0 0 0 0 0
C3H15_UN0833.1_JASPAR_shift2 (C3H15:UN0833.1:JASPAR)	0.715	0.476	3.178	0.897	0.894	979	796	623	647	699	748.800		; assembly_11 versus C3H15_UN0833.1_JASPAR (C3H15:UN0833.1:JASPAR); m=18/24; ncol2=14; w=-4; offset=-4; strand=D; shift=2; score= 748.8; --CCGAaAAwwTCGGa- ; cor=0.715; Ncor=0.476; logoDP=3.178; NsEucl=0.897; NSW=0.894; rcor=979; rNcor=796; rlogoDP=623; rNsEucl=647; rNSW=699; rank_mean=748.800; match_rank= a 0 0 25 1 1 874 537 869 928 584 400 88 88 0 3 530 0 c 0 0 759 998 0 8 106 13 1 36 161 171 911 0 153 83 0 g 0 0 208 0 941 75 160 45 18 51 166 50 0 1000 829 200 0 t 0 0 6 0 56 41 195 71 51 327 270 689 0 0 13 185 0
OsWRKY45_6ir8_A_3D-footprint_shift6 (OsWRKY45:6ir8_A:3D-footprint)	0.736	0.468	2.926	0.883	0.904	849	831	652	858	602	758.400		; assembly_11 versus OsWRKY45_6ir8_A_3D-footprint (OsWRKY45:6ir8_A:3D-footprint); m=19/24; ncol2=7; w=0; offset=0; strand=D; shift=6; score= 758.4; ------tnnnACC---- ; cor=0.736; Ncor=0.468; logoDP=2.926; NsEucl=0.883; NSW=0.904; rcor=849; rNcor=831; rlogoDP=652; rNsEucl=858; rNSW=602; rank_mean=758.400; match_rank= a 0 0 0 0 0 0 19 24 24 24 96 0 0 0 0 0 0 c 0 0 0 0 0 0 19 24 24 24 0 96 77 0 0 0 0 g 0 0 0 0 0 0 19 24 24 24 0 0 0 0 0 0 0 t 0 0 0 0 0 0 39 24 24 24 0 0 19 0 0 0 0
OsMYB44_UN0824.1_JASPAR_rc_shift9 (OsMYB44:UN0824.1:JASPAR_rc)	0.709	0.515	3.806	0.874	0.873	1036	662	546	949	910	820.600		; assembly_11 versus OsMYB44_UN0824.1_JASPAR_rc (OsMYB44:UN0824.1:JASPAR_rc); m=20/24; ncol2=8; w=0; offset=3; strand=R; shift=9; score= 820.6; ---------gACMGkTA ; cor=0.709; Ncor=0.515; logoDP=3.806; NsEucl=0.874; NSW=0.873; rcor=1036; rNcor=662; rlogoDP=546; rNsEucl=949; rNSW=910; rank_mean=820.600; match_rank= a 0 0 0 0 0 0 0 0 0 240 895 0 299 0 0 0 768 c 0 0 0 0 0 0 0 0 0 51 0 895 699 0 0 0 41 g 0 0 0 0 0 0 0 0 0 536 104 0 0 999 616 0 41 t 0 0 0 0 0 0 0 0 0 171 0 104 0 0 383 999 149
LBD19_UN0869.1_JASPAR_shift2 (LBD19:UN0869.1:JASPAR)	0.712	0.427	2.595	0.889	0.890	998	964	705	783	759	841.800		; assembly_11 versus LBD19_UN0869.1_JASPAR (LBD19:UN0869.1:JASPAR); m=21/24; ncol2=13; w=-4; offset=-4; strand=D; shift=2; score= 841.8; --CCggAAAwtccGG-- ; cor=0.712; Ncor=0.427; logoDP=2.595; NsEucl=0.889; NSW=0.890; rcor=998; rNcor=964; rlogoDP=705; rNsEucl=783; rNSW=759; rank_mean=841.800; match_rank= a 0 0 25 18 113 75 723 791 903 666 143 175 178 0 11 0 0 c 0 0 745 976 78 116 5 0 8 28 231 658 626 0 233 0 0 g 0 0 215 5 626 630 215 131 43 18 71 115 43 991 716 0 0 t 0 0 15 0 181 178 56 76 45 286 553 51 151 8 38 0 0
Solyc07g040920.2.1_MYBRELATED_1_AT1G72740_EEAD0654_EEADannot_shift3 (Solyc07g040920.2.1_MYBRELATED_1_AT1G72740:EEAD0654:EEADannot)	0.709	0.405	4.458	0.867	0.858	1028	1061	456	986	1009	908.000		; assembly_11 versus Solyc07g040920.2.1_MYBRELATED_1_AT1G72740_EEAD0654_EEADannot (Solyc07g040920.2.1_MYBRELATED_1_AT1G72740:EEAD0654:EEADannot); m=22/24; ncol2=11; w=-3; offset=-3; strand=D; shift=3; score= 908; ---ACCCTAAACCC--- ; cor=0.709; Ncor=0.405; logoDP=4.458; NsEucl=0.867; NSW=0.858; rcor=1028; rNcor=1061; rlogoDP=456; rNsEucl=986; rNSW=1009; rank_mean=908.000; match_rank= a 0 0 0 97 8 4 3 6 96 99 92 5 4 7 0 0 0 c 0 0 0 1 84 86 93 6 0 0 5 77 85 77 0 0 0 g 0 0 0 0 1 4 0 1 0 1 0 2 1 3 0 0 0 t 0 0 0 2 7 6 4 87 4 0 3 16 10 13 0 0 0
XP_013589913.1_MYBRELATED_1_AT1G72740_EEAD0665_EEADannot_shift3 (XP_013589913.1_MYBRELATED_1_AT1G72740:EEAD0665:EEADannot)	0.704	0.402	4.389	0.866	0.855	1064	1073	463	1001	1025	925.200		; assembly_11 versus XP_013589913.1_MYBRELATED_1_AT1G72740_EEAD0665_EEADannot (XP_013589913.1_MYBRELATED_1_AT1G72740:EEAD0665:EEADannot); m=23/24; ncol2=11; w=-3; offset=-3; strand=D; shift=3; score= 925.2; ---ACCCTAAACCC--- ; cor=0.704; Ncor=0.402; logoDP=4.389; NsEucl=0.866; NSW=0.855; rcor=1064; rNcor=1073; rlogoDP=463; rNsEucl=1001; rNSW=1025; rank_mean=925.200; match_rank= a 0 0 0 97 7 4 3 6 94 99 92 6 5 10 0 0 0 c 0 0 0 0 86 84 90 2 0 1 4 77 85 78 0 0 0 g 0 0 0 1 1 5 1 1 0 0 0 1 1 2 0 0 0 t 0 0 0 2 6 7 6 91 6 0 4 16 9 10 0 0 0
AtGRP7iCLIP_EEAD0145_EEADannot_rc_shift6 (AtGRP7iCLIP:EEAD0145:EEADannot_rc)	0.701	0.446	0.446	0.873	0.887	1084	908	953	954	785	936.800		; assembly_11 versus AtGRP7iCLIP_EEAD0145_EEADannot_rc (AtGRP7iCLIP:EEAD0145:EEADannot_rc); m=24/24; ncol2=7; w=0; offset=0; strand=R; shift=6; score= 936.8; ------aGAAACa---- ; cor=0.701; Ncor=0.446; logoDP=0.446; NsEucl=0.873; NSW=0.887; rcor=1084; rNcor=908; rlogoDP=953; rNsEucl=954; rNSW=785; rank_mean=936.800; match_rank= a 0 0 0 0 0 0 55 4 97 77 77 8 60 0 0 0 0 c 0 0 0 0 0 0 20 19 1 0 1 77 8 0 0 0 0 g 0 0 0 0 0 0 13 68 0 11 17 0 15 0 0 0 0 t 0 0 0 0 0 0 12 9 2 12 5 15 17 0 0 0 0

One-to-n matrix alignment; reference matrix: assembly_12_shift8 ; 116 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
assembly_12_shift8 (assembly_12)
; assembly_12; m=0 (reference); ncol1=10; shift=8; ncol=18; --------waAAAAGCww ; Alignment reference a 0 0 0 0 0 0 0 0 280 283 751 751 751 751 0 0 272 262 c 0 0 0 0 0 0 0 0 130 178 0 0 0 0 0 751 147 132 g 0 0 0 0 0 0 0 0 133 110 0 0 0 0 751 0 67 114 t 0 0 0 0 0 0 0 0 208 180 0 0 0 0 0 0 265 243

Dof2_MA0020.1_JASPAR_shift11 (Dof2:MA0020.1:JASPAR) 0.978 0.587 8.049 0.951 0.985 24 402 43 36 26 106.200 23
; assembly_12 versus Dof2_MA0020.1_JASPAR (Dof2:MA0020.1:JASPAR); m=1/115; ncol2=6; w=0; offset=3; strand=D; shift=11; score= 106.2; -----------AAAGcm- ; cor=0.978; Ncor=0.587; logoDP=8.049; NsEucl=0.951; NSW=0.985; rcor=24; rNcor=402; rlogoDP=43; rNsEucl=36; rNSW=26; rank_mean=106.200; match_rank=23 a 0 0 0 0 0 0 0 0 0 0 0 21 21 21 0 3 7 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 6 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 2 3 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0

CDF2_MA0973.1_JASPAR_shift8 (CDF2:MA0973.1:JASPAR) 0.858 0.858 6.812 0.922 0.939 231 7 170 201 199 161.600 42
; assembly_12 versus CDF2_MA0973.1_JASPAR (CDF2:MA0973.1:JASPAR); m=2/115; ncol2=10; w=0; offset=0; strand=D; shift=8; score= 161.6; --------maWAAAGyrh ; cor=0.858; Ncor=0.858; logoDP=6.812; NsEucl=0.922; NSW=0.939; rcor=231; rNcor=7; rlogoDP=170; rNsEucl=201; rNSW=199; rank_mean=161.600; match_rank=42 a 0 0 0 0 0 0 0 0 334 608 693 980 979 868 17 53 328 299 c 0 0 0 0 0 0 0 0 284 92 16 10 10 29 7 295 77 282 g 0 0 0 0 0 0 0 0 235 150 41 4 2 81 969 154 395 155 t 0 0 0 0 0 0 0 0 148 150 250 5 9 22 6 498 200 264

CDF2_M0653_1.02_CISBP_shift8 (CDF2:M0653_1.02:CISBP) 0.857 0.857 6.833 0.922 0.938 234 8 167 203 204 163.200 43
; assembly_12 versus CDF2_M0653_1.02_CISBP (CDF2:M0653_1.02:CISBP); m=3/115; ncol2=10; w=0; offset=0; strand=D; shift=8; score= 163.2; --------maWAAAGyrh ; cor=0.857; Ncor=0.857; logoDP=6.833; NsEucl=0.922; NSW=0.938; rcor=234; rNcor=8; rlogoDP=167; rNsEucl=203; rNSW=204; rank_mean=163.200; match_rank=43 a 0 0 0 0 0 0 0 0 33 61 69 98 98 87 2 6 33 30 c 0 0 0 0 0 0 0 0 28 9 2 1 1 3 0 29 8 28 g 0 0 0 0 0 0 0 0 24 15 4 0 0 8 97 15 39 16 t 0 0 0 0 0 0 0 0 15 15 25 1 1 2 1 50 20 26

Dof2_MA0020.2_JASPAR_shift11 (Dof2:MA0020.2:JASPAR) 0.981 0.491 8.048 0.945 0.985 18 748 45 50 27 177.600 51
; assembly_12 versus Dof2_MA0020.2_JASPAR (Dof2:MA0020.2:JASPAR); m=4/115; ncol2=5; w=0; offset=3; strand=D; shift=11; score= 177.6; -----------AAAGc-- ; cor=0.981; Ncor=0.491; logoDP=8.048; NsEucl=0.945; NSW=0.985; rcor=18; rNcor=748; rlogoDP=45; rNsEucl=50; rNSW=27; rank_mean=177.600; match_rank=51 a 0 0 0 0 0 0 0 0 0 0 0 21 21 21 0 3 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 2 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0

DOF2.2_MA1272.3_JASPAR_shift9 (DOF2.2:MA1272.3:JASPAR) 0.940 0.564 9.533 0.915 0.956 52 486 7 297 100 188.400
; assembly_12 versus DOF2.2_MA1272.3_JASPAR (DOF2.2:MA1272.3:JASPAR); m=5/115; ncol2=6; w=0; offset=1; strand=D; shift=9; score= 188.4; ---------AAAAAG--- ; cor=0.940; Ncor=0.564; logoDP=9.533; NsEucl=0.915; NSW=0.956; rcor=52; rNcor=486; rlogoDP=7; rNsEucl=297; rNSW=100; rank_mean=188.400; match_rank= a 0 0 0 0 0 0 0 0 0 1086 1077 1086 1084 1086 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1086 0 0 0 t 0 0 0 0 0 0 0 0 0 0 9 0 2 0 0 0 0 0

MNB1A_MA0053.1_JASPAR_shift11 (MNB1A:MA0053.1:JASPAR) 0.969 0.484 8.050 0.931 0.976 29 771 41 121 38 200.000
; assembly_12 versus MNB1A_MA0053.1_JASPAR (MNB1A:MA0053.1:JASPAR); m=6/115; ncol2=5; w=0; offset=3; strand=D; shift=11; score= 200; -----------AAAGc-- ; cor=0.969; Ncor=0.484; logoDP=8.050; NsEucl=0.931; NSW=0.976; rcor=29; rNcor=771; rlogoDP=41; rNsEucl=121; rNSW=38; rank_mean=200.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 15 15 15 0 3 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0

PBF_MA0064.1_JASPAR_shift11 (PBF:MA0064.1:JASPAR) 0.960 0.480 7.962 0.923 0.970 34 778 48 185 54 219.800
; assembly_12 versus PBF_MA0064.1_JASPAR (PBF:MA0064.1:JASPAR); m=7/115; ncol2=5; w=0; offset=3; strand=D; shift=11; score= 219.8; -----------AAAGy-- ; cor=0.960; Ncor=0.480; logoDP=7.962; NsEucl=0.923; NSW=0.970; rcor=34; rNcor=778; rlogoDP=48; rNsEucl=185; rNSW=54; rank_mean=219.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 16 16 16 0 1 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 1 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0

CDF3_MA0974.1_JASPAR_shift9 (CDF3:MA0974.1:JASPAR) 0.844 0.760 6.872 0.910 0.926 281 36 161 397 335 242.000
; assembly_12 versus CDF3_MA0974.1_JASPAR (CDF3:MA0974.1:JASPAR); m=8/115; ncol2=9; w=0; offset=1; strand=D; shift=9; score= 242; ---------awAAAGygm ; cor=0.844; Ncor=0.760; logoDP=6.872; NsEucl=0.910; NSW=0.926; rcor=281; rNcor=36; rlogoDP=161; rNsEucl=397; rNSW=335; rank_mean=242.000; match_rank= a 0 0 0 0 0 0 0 0 0 447 607 994 989 880 19 70 222 286 c 0 0 0 0 0 0 0 0 0 143 29 3 5 27 7 291 102 343 g 0 0 0 0 0 0 0 0 0 220 65 1 0 83 969 160 495 169 t 0 0 0 0 0 0 0 0 0 191 298 2 6 10 6 479 180 202

cdf3_M0651_1.02_CISBP_shift9 (cdf3:M0651_1.02:CISBP) 0.843 0.759 6.878 0.909 0.926 286 38 159 399 338 244.000
; assembly_12 versus cdf3_M0651_1.02_CISBP (cdf3:M0651_1.02:CISBP); m=9/115; ncol2=9; w=0; offset=1; strand=D; shift=9; score= 244; ---------awAAAGygm ; cor=0.843; Ncor=0.759; logoDP=6.878; NsEucl=0.909; NSW=0.926; rcor=286; rNcor=38; rlogoDP=159; rNsEucl=399; rNSW=338; rank_mean=244.000; match_rank= a 0 0 0 0 0 0 0 0 0 45 61 99 99 88 1 7 22 29 c 0 0 0 0 0 0 0 0 0 14 3 0 0 3 1 29 10 34 g 0 0 0 0 0 0 0 0 0 22 6 1 0 8 97 16 50 17 t 0 0 0 0 0 0 0 0 0 19 30 0 1 1 1 48 18 20

Dof3_MA0021.1_JASPAR_shift11 (Dof3:MA0021.1:JASPAR) 0.904 0.543 7.950 0.902 0.942 104 563 50 560 173 290.000
; assembly_12 versus Dof3_MA0021.1_JASPAR (Dof3:MA0021.1:JASPAR); m=10/115; ncol2=6; w=0; offset=3; strand=D; shift=11; score= 290; -----------AAAGyv- ; cor=0.904; Ncor=0.543; logoDP=7.950; NsEucl=0.902; NSW=0.942; rcor=104; rNcor=563; rlogoDP=50; rNsEucl=560; rNSW=173; rank_mean=290.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 21 21 21 0 0 6 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 3 9 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0

C3H36_UN0844.1_JASPAR_shift9 (C3H36:UN0844.1:JASPAR) 0.825 0.742 8.413 0.903 0.915 371 51 27 534 472 291.000
; assembly_12 versus C3H36_UN0844.1_JASPAR (C3H36:UN0844.1:JASPAR); m=11/115; ncol2=9; w=0; offset=1; strand=D; shift=9; score= 291; ---------AAAAAGkwr ; cor=0.825; Ncor=0.742; logoDP=8.413; NsEucl=0.903; NSW=0.915; rcor=371; rNcor=51; rlogoDP=27; rNsEucl=534; rNSW=472; rank_mean=291.000; match_rank= a 0 0 0 0 0 0 0 0 0 716 761 1000 1000 985 0 98 273 585 c 0 0 0 0 0 0 0 0 0 98 21 0 0 0 0 130 105 15 g 0 0 0 0 0 0 0 0 0 118 0 0 0 15 1000 346 171 298 t 0 0 0 0 0 0 0 0 0 66 216 0 0 0 0 425 450 101

KHZ1_UN0404.2_JASPAR_shift9 (KHZ1:UN0404.2:JASPAR) 0.825 0.742 8.407 0.903 0.915 372 52 31 533 471 291.800
; assembly_12 versus KHZ1_UN0404.2_JASPAR (KHZ1:UN0404.2:JASPAR); m=12/115; ncol2=9; w=0; offset=1; strand=D; shift=9; score= 291.8; ---------AAAAAGkwr ; cor=0.825; Ncor=0.742; logoDP=8.407; NsEucl=0.903; NSW=0.915; rcor=372; rNcor=52; rlogoDP=31; rNsEucl=533; rNSW=471; rank_mean=291.800; match_rank= a 0 0 0 0 0 0 0 0 0 717 762 1000 1000 985 0 98 273 585 c 0 0 0 0 0 0 0 0 0 98 22 0 0 0 0 130 105 15 g 0 0 0 0 0 0 0 0 0 118 0 0 0 15 1000 347 172 298 t 0 0 0 0 0 0 0 0 0 67 217 0 0 0 0 425 450 102

DOF4.3_MA1747.2_JASPAR_rc_shift10 (DOF4.3:MA1747.2:JASPAR_rc) 0.892 0.476 7.878 0.914 0.941 131 800 55 303 179 293.600
; assembly_12 versus DOF4.3_MA1747.2_JASPAR_rc (DOF4.3:MA1747.2:JASPAR_rc); m=13/115; ncol2=13; w=0; offset=2; strand=R; shift=10; score= 293.6; ----------wAAAGcyw ; cor=0.892; Ncor=0.476; logoDP=7.878; NsEucl=0.914; NSW=0.941; rcor=131; rNcor=800; rlogoDP=55; rNsEucl=303; rNSW=179; rank_mean=293.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 424 998 998 995 2 95 76 429 c 0 0 0 0 0 0 0 0 0 0 103 0 0 0 0 571 345 91 g 0 0 0 0 0 0 0 0 0 0 66 2 0 5 995 147 2 178 t 0 0 0 0 0 0 0 0 0 0 407 0 2 0 3 188 578 302

DOF1.7_MA1277.2_JASPAR_shift9 (DOF1.7:MA1277.2:JASPAR) 0.835 0.626 8.399 0.906 0.920 323 261 32 472 421 301.800
; assembly_12 versus DOF1.7_MA1277.2_JASPAR (DOF1.7:MA1277.2:JASPAR); m=14/115; ncol2=11; w=0; offset=1; strand=D; shift=9; score= 301.8; ---------aAAAAGtar ; cor=0.835; Ncor=0.626; logoDP=8.399; NsEucl=0.906; NSW=0.920; rcor=323; rNcor=261; rlogoDP=32; rNsEucl=472; rNSW=421; rank_mean=301.800; match_rank= a 0 0 0 0 0 0 0 0 0 388 466 595 595 575 0 96 371 342 c 0 0 0 0 0 0 0 0 0 48 0 0 0 0 0 113 18 26 g 0 0 0 0 0 0 0 0 0 108 3 0 0 20 595 94 90 177 t 0 0 0 0 0 0 0 0 0 51 126 0 0 0 0 292 116 50

dof4.5_MA1269.1_JASPAR_shift8 (dof4.5:MA1269.1:JASPAR) 0.818 0.584 8.174 0.912 0.922 409 413 39 352 396 321.800
; assembly_12 versus dof4.5_MA1269.1_JASPAR (dof4.5:MA1269.1:JASPAR); m=15/115; ncol2=14; w=0; offset=0; strand=D; shift=8; score= 321.8; --------rawAAAGtwr ; cor=0.818; Ncor=0.584; logoDP=8.174; NsEucl=0.912; NSW=0.922; rcor=409; rNcor=413; rlogoDP=39; rNsEucl=352; rNSW=396; rank_mean=321.800; match_rank= a 0 0 0 0 0 0 0 0 182 402 349 600 600 600 0 104 282 235 c 0 0 0 0 0 0 0 0 108 72 7 0 0 0 0 125 15 54 g 0 0 0 0 0 0 0 0 194 47 27 0 0 0 600 57 135 233 t 0 0 0 0 0 0 0 0 116 79 217 0 0 0 0 314 168 78

CDF2_MA0973.2_JASPAR_shift9 (CDF2:MA0973.2:JASPAR) 0.878 0.615 6.807 0.897 0.926 160 289 171 653 347 324.000
; assembly_12 versus CDF2_MA0973.2_JASPAR (CDF2:MA0973.2:JASPAR); m=16/115; ncol2=7; w=0; offset=1; strand=D; shift=9; score= 324; ---------aWAAAGy-- ; cor=0.878; Ncor=0.615; logoDP=6.807; NsEucl=0.897; NSW=0.926; rcor=160; rNcor=289; rlogoDP=171; rNsEucl=653; rNSW=347; rank_mean=324.000; match_rank= a 0 0 0 0 0 0 0 0 0 608 693 980 979 868 17 53 0 0 c 0 0 0 0 0 0 0 0 0 92 16 10 10 29 7 295 0 0 g 0 0 0 0 0 0 0 0 0 150 41 4 2 81 969 154 0 0 t 0 0 0 0 0 0 0 0 0 150 250 5 9 22 6 498 0 0

DOF2.2_MA1272.2_JASPAR_shift7 (DOF2.2:MA1272.2:JASPAR) 0.825 0.675 9.554 0.900 0.911 367 142 6 588 517 324.000
; assembly_12 versus DOF2.2_MA1272.2_JASPAR (DOF2.2:MA1272.2:JASPAR); m=17/115; ncol2=10; w=-1; offset=-1; strand=D; shift=7; score= 324; -------wyAAAAAGtw- ; cor=0.825; Ncor=0.675; logoDP=9.554; NsEucl=0.900; NSW=0.911; rcor=367; rNcor=142; rlogoDP=6; rNsEucl=588; rNSW=517; rank_mean=324.000; match_rank= a 0 0 0 0 0 0 0 357 203 1086 1077 1086 1084 1086 0 263 460 0 c 0 0 0 0 0 0 0 142 278 0 0 0 0 0 0 154 112 0 g 0 0 0 0 0 0 0 190 255 0 0 0 0 0 1086 208 195 0 t 0 0 0 0 0 0 0 397 350 0 9 0 2 0 0 461 319 0

e_gw1.170.52.1_M0659_1.02_CISBP_shift8 (e_gw1.170.52.1:M0659_1.02:CISBP) 0.834 0.834 3.909 0.911 0.922 329 13 526 354 400 324.400
; assembly_12 versus e_gw1.170.52.1_M0659_1.02_CISBP (e_gw1.170.52.1:M0659_1.02:CISBP); m=18/115; ncol2=10; w=0; offset=0; strand=D; shift=8; score= 324.4; --------srwAAAGydr ; cor=0.834; Ncor=0.834; logoDP=3.909; NsEucl=0.911; NSW=0.922; rcor=329; rNcor=13; rlogoDP=526; rNsEucl=354; rNSW=400; rank_mean=324.400; match_rank= a 0 0 0 0 0 0 0 0 24 30 40 89 89 72 7 18 27 28 c 0 0 0 0 0 0 0 0 27 22 11 4 5 20 2 26 19 22 g 0 0 0 0 0 0 0 0 25 26 17 1 0 3 84 23 27 27 t 0 0 0 0 0 0 0 0 24 22 32 6 6 5 7 33 27 23

PHYPADRAFT_153324_MA0989.1_JASPAR_shift8 (PHYPADRAFT_153324:MA0989.1:JASPAR) 0.852 0.767 4.176 0.907 0.922 251 34 489 458 401 326.600
; assembly_12 versus PHYPADRAFT_153324_MA0989.1_JASPAR (PHYPADRAFT_153324:MA0989.1:JASPAR); m=19/115; ncol2=9; w=0; offset=0; strand=D; shift=8; score= 326.6; --------vrwAAaGyd- ; cor=0.852; Ncor=0.767; logoDP=4.176; NsEucl=0.907; NSW=0.922; rcor=251; rNcor=34; rlogoDP=489; rNsEucl=458; rNSW=401; rank_mean=326.600; match_rank= a 0 0 0 0 0 0 0 0 253 334 482 861 926 672 71 139 285 0 c 0 0 0 0 0 0 0 0 264 193 71 62 36 147 27 288 158 0 g 0 0 0 0 0 0 0 0 261 255 118 13 0 52 898 195 297 0 t 0 0 0 0 0 0 0 0 222 218 330 65 38 129 5 378 260 0

e_gw1.392.16.1_M0660_1.02_CISBP_shift8 (e_gw1.392.16.1:M0660_1.02:CISBP) 0.851 0.766 4.162 0.906 0.921 255 35 495 463 408 331.200
; assembly_12 versus e_gw1.392.16.1_M0660_1.02_CISBP (e_gw1.392.16.1:M0660_1.02:CISBP); m=20/115; ncol2=9; w=0; offset=0; strand=D; shift=8; score= 331.2; --------vrwAAaGyd- ; cor=0.851; Ncor=0.766; logoDP=4.162; NsEucl=0.906; NSW=0.921; rcor=255; rNcor=35; rlogoDP=495; rNsEucl=463; rNSW=408; rank_mean=331.200; match_rank= a 0 0 0 0 0 0 0 0 25 33 48 86 92 67 7 13 28 0 c 0 0 0 0 0 0 0 0 26 19 7 6 4 15 3 29 16 0 g 0 0 0 0 0 0 0 0 27 26 12 2 0 5 90 20 30 0 t 0 0 0 0 0 0 0 0 22 22 33 6 4 13 0 38 26 0

PHYPADRAFT_140773_MA0987.1_JASPAR_shift8 (PHYPADRAFT_140773:MA0987.1:JASPAR) 0.832 0.832 3.880 0.911 0.921 340 14 531 366 413 332.800
; assembly_12 versus PHYPADRAFT_140773_MA0987.1_JASPAR (PHYPADRAFT_140773:MA0987.1:JASPAR); m=21/115; ncol2=10; w=0; offset=0; strand=D; shift=8; score= 332.8; --------srwAAAGydr ; cor=0.832; Ncor=0.832; logoDP=3.880; NsEucl=0.911; NSW=0.921; rcor=340; rNcor=14; rlogoDP=531; rNsEucl=366; rNSW=413; rank_mean=332.800; match_rank= a 0 0 0 0 0 0 0 0 243 302 396 888 892 715 72 182 271 280 c 0 0 0 0 0 0 0 0 266 215 111 43 46 205 22 258 193 218 g 0 0 0 0 0 0 0 0 253 260 173 10 1 28 839 229 271 272 t 0 0 0 0 0 0 0 0 238 222 321 60 61 52 67 331 265 229

PHYPADRAFT_38837_MA1022.1_JASPAR_shift8 (PHYPADRAFT_38837:MA1022.1:JASPAR) 0.840 0.840 3.392 0.911 0.921 302 10 590 362 410 334.800
; assembly_12 versus PHYPADRAFT_38837_MA1022.1_JASPAR (PHYPADRAFT_38837:MA1022.1:JASPAR); m=22/115; ncol2=10; w=0; offset=0; strand=D; shift=8; score= 334.8; --------vrwAAaGydm ; cor=0.840; Ncor=0.840; logoDP=3.392; NsEucl=0.911; NSW=0.921; rcor=302; rNcor=10; rlogoDP=590; rNsEucl=362; rNSW=410; rank_mean=334.800; match_rank= a 0 0 0 0 0 0 0 0 251 343 463 828 855 644 61 150 259 283 c 0 0 0 0 0 0 0 0 264 186 85 68 62 216 27 269 174 262 g 0 0 0 0 0 0 0 0 257 254 129 24 1 54 860 207 307 227 t 0 0 0 0 0 0 0 0 228 217 323 81 82 86 52 374 259 227

gw1.385.26.1_M0663_1.02_CISBP_shift8 (gw1.385.26.1:M0663_1.02:CISBP) 0.840 0.840 3.422 0.911 0.921 304 11 588 364 411 335.600
; assembly_12 versus gw1.385.26.1_M0663_1.02_CISBP (gw1.385.26.1:M0663_1.02:CISBP); m=23/115; ncol2=10; w=0; offset=0; strand=D; shift=8; score= 335.6; --------vrwAAaGydm ; cor=0.840; Ncor=0.840; logoDP=3.422; NsEucl=0.911; NSW=0.921; rcor=304; rNcor=11; rlogoDP=588; rNsEucl=364; rNSW=411; rank_mean=335.600; match_rank= a 0 0 0 0 0 0 0 0 25 34 46 83 86 64 6 15 26 28 c 0 0 0 0 0 0 0 0 26 19 9 7 6 22 3 27 17 26 g 0 0 0 0 0 0 0 0 26 25 13 2 0 5 86 21 31 23 t 0 0 0 0 0 0 0 0 23 22 32 8 8 9 5 37 26 23

CDF5_UN0360.1_JASPAR_shift7 (CDF5:UN0360.1:JASPAR) 0.821 0.672 9.598 0.899 0.909 393 146 4 616 545 340.800
; assembly_12 versus CDF5_UN0360.1_JASPAR (CDF5:UN0360.1:JASPAR); m=24/115; ncol2=10; w=-1; offset=-1; strand=D; shift=7; score= 340.8; -------wtAAAAAGtr- ; cor=0.821; Ncor=0.672; logoDP=9.598; NsEucl=0.899; NSW=0.909; rcor=393; rNcor=146; rlogoDP=4; rNsEucl=616; rNSW=545; rank_mean=340.800; match_rank= a 0 0 0 0 0 0 0 1306 826 3821 3802 3820 3820 3821 0 941 1597 0 c 0 0 0 0 0 0 0 482 900 0 0 0 0 0 0 510 325 0 g 0 0 0 0 0 0 0 645 926 0 0 0 0 0 3821 724 985 0 t 0 0 0 0 0 0 0 1388 1169 0 19 1 1 0 0 1646 914 0

AT3G12130.ampDAP_M0341_AthalianaCistrome_shift5 (AT3G12130.ampDAP:M0341:AthalianaCistrome) 0.814 0.581 8.410 0.910 0.919 430 422 28 393 438 342.200
; assembly_12 versus AT3G12130.ampDAP_M0341_AthalianaCistrome (AT3G12130.ampDAP:M0341:AthalianaCistrome); m=25/115; ncol2=14; w=-3; offset=-3; strand=D; shift=5; score= 342.2; -----aawsAAAAAGkwr ; cor=0.814; Ncor=0.581; logoDP=8.410; NsEucl=0.910; NSW=0.919; rcor=430; rNcor=422; rlogoDP=28; rNsEucl=393; rNSW=438; rank_mean=342.200; match_rank= a 0 0 0 0 0 288 252 223 101 430 457 600 600 591 0 59 164 351 c 0 0 0 0 0 76 104 82 217 59 13 0 0 0 0 78 63 9 g 0 0 0 0 0 133 112 138 184 71 0 0 0 9 600 208 103 179 t 0 0 0 0 0 103 132 157 98 40 130 0 0 0 0 255 270 61

KHZ1_UN0404.1_JASPAR_shift5 (KHZ1:UN0404.1:JASPAR) 0.814 0.581 8.409 0.910 0.918 431 424 30 395 440 344.000
; assembly_12 versus KHZ1_UN0404.1_JASPAR (KHZ1:UN0404.1:JASPAR); m=26/115; ncol2=14; w=-3; offset=-3; strand=D; shift=5; score= 344; -----aawsAAAAAGkwr ; cor=0.814; Ncor=0.581; logoDP=8.409; NsEucl=0.910; NSW=0.918; rcor=431; rNcor=424; rlogoDP=30; rNsEucl=395; rNSW=440; rank_mean=344.000; match_rank= a 0 0 0 0 0 480 420 372 168 717 762 1000 1000 985 0 98.333 273 585 c 0 0 0 0 0 127 173 137 362 98.333 21.667 0 0 0 0 130 105 15 g 0 0 0 0 0 222 187 230 307 118 0 0 0 15 1000 347 172 298 t 0 0 0 0 0 172 220 262 163 66.667 217 0 0 0 0 425 450 102

At1g64620.ampDAP_M0251_AthalianaCistrome_shift8 (At1g64620.ampDAP:M0251:AthalianaCistrome) 0.794 0.722 8.773 0.903 0.906 532 68 13 532 577 344.400
; assembly_12 versus At1g64620.ampDAP_M0251_AthalianaCistrome (At1g64620.ampDAP:M0251:AthalianaCistrome); m=27/115; ncol2=11; w=0; offset=0; strand=D; shift=8; score= 344.4; --------sAAAAAGkwa ; cor=0.794; Ncor=0.722; logoDP=8.773; NsEucl=0.903; NSW=0.906; rcor=532; rNcor=68; rlogoDP=13; rNsEucl=532; rNSW=577; rank_mean=344.400; match_rank= a 0 0 0 0 0 0 0 0 146 560 490 600 600 599 0 33 260 358 c 0 0 0 0 0 0 0 0 163 5 0 0 0 0 0 57 30 22 g 0 0 0 0 0 0 0 0 161 12 0 0 0 1 600 183 94 126 t 0 0 0 0 0 0 0 0 130 23 110 0 0 0 0 327 216 94

TMO6_M0654_1.02_CISBP_shift8 (TMO6:M0654_1.02:CISBP) 0.901 0.631 3.058 0.901 0.932 110 239 634 569 271 364.600
; assembly_12 versus TMO6_M0654_1.02_CISBP (TMO6:M0654_1.02:CISBP); m=28/115; ncol2=7; w=0; offset=0; strand=D; shift=8; score= 364.6; --------vawAAmG--- ; cor=0.901; Ncor=0.631; logoDP=3.058; NsEucl=0.901; NSW=0.932; rcor=110; rNcor=239; rlogoDP=634; rNsEucl=569; rNSW=271; rank_mean=364.600; match_rank= a 0 0 0 0 0 0 0 0 25 33 40 84 85 61 7 0 0 0 c 0 0 0 0 0 0 0 0 25 21 13 6 8 33 5 0 0 0 g 0 0 0 0 0 0 0 0 26 23 14 2 0 1 76 0 0 0 t 0 0 0 0 0 0 0 0 24 23 33 8 7 5 12 0 0 0

DOF5.3_MA1071.1_JASPAR_shift8 (DOF5.3:MA1071.1:JASPAR) 0.901 0.630 3.081 0.901 0.932 113 242 631 571 272 365.800
; assembly_12 versus DOF5.3_MA1071.1_JASPAR (DOF5.3:MA1071.1:JASPAR); m=29/115; ncol2=7; w=0; offset=0; strand=D; shift=8; score= 365.8; --------gawAAmG--- ; cor=0.901; Ncor=0.630; logoDP=3.081; NsEucl=0.901; NSW=0.932; rcor=113; rNcor=242; rlogoDP=631; rNsEucl=571; rNSW=272; rank_mean=365.800; match_rank= a 0 0 0 0 0 0 0 0 247 327 396 842 850 611 66 0 0 0 c 0 0 0 0 0 0 0 0 247 213 128 61 79 329 52 0 0 0 g 0 0 0 0 0 0 0 0 262 228 146 17 0 14 767 0 0 0 t 0 0 0 0 0 0 0 0 244 233 331 81 70 47 116 0 0 0

DOF1.8_MA0981.1_JASPAR_shift8 (DOF1.8:MA0981.1:JASPAR) 0.825 0.825 3.194 0.908 0.915 373 16 622 431 478 384.000
; assembly_12 versus DOF1.8_MA0981.1_JASPAR (DOF1.8:MA0981.1:JASPAR); m=30/115; ncol2=10; w=0; offset=0; strand=D; shift=8; score= 384; --------vawAAaGtdr ; cor=0.825; Ncor=0.825; logoDP=3.194; NsEucl=0.908; NSW=0.915; rcor=373; rNcor=16; rlogoDP=622; rNsEucl=431; rNSW=478; rank_mean=384.000; match_rank= a 0 0 0 0 0 0 0 0 251 321 415 812 831 658 65 170 268 288 c 0 0 0 0 0 0 0 0 259 197 100 72 64 233 23 241 189 209 g 0 0 0 0 0 0 0 0 256 250 135 38 3 27 846 231 270 269 t 0 0 0 0 0 0 0 0 234 233 350 77 102 83 65 359 273 234

AT1G64620_M0647_1.02_CISBP_shift8 (AT1G64620:M0647_1.02:CISBP) 0.823 0.823 3.207 0.907 0.914 381 17 621 438 483 388.000
; assembly_12 versus AT1G64620_M0647_1.02_CISBP (AT1G64620:M0647_1.02:CISBP); m=31/115; ncol2=10; w=0; offset=0; strand=D; shift=8; score= 388; --------vrwAAaGtdr ; cor=0.823; Ncor=0.823; logoDP=3.207; NsEucl=0.907; NSW=0.914; rcor=381; rNcor=17; rlogoDP=621; rNsEucl=438; rNSW=483; rank_mean=388.000; match_rank= a 0 0 0 0 0 0 0 0 25 32 41 81 83 66 7 17 27 29 c 0 0 0 0 0 0 0 0 26 20 10 7 7 23 2 24 19 21 g 0 0 0 0 0 0 0 0 26 25 14 4 0 3 85 23 27 27 t 0 0 0 0 0 0 0 0 23 23 35 8 10 8 6 36 27 23

dof43.DAP_M0281_AthalianaCistrome_shift11 (dof43.DAP:M0281:AthalianaCistrome) 0.875 0.438 7.188 0.903 0.935 168 934 126 526 245 399.800
; assembly_12 versus dof43.DAP_M0281_AthalianaCistrome (dof43.DAP:M0281:AthalianaCistrome); m=32/115; ncol2=11; w=0; offset=3; strand=D; shift=11; score= 399.8; -----------AAAGyya ; cor=0.875; Ncor=0.438; logoDP=7.188; NsEucl=0.903; NSW=0.935; rcor=168; rNcor=934; rlogoDP=126; rNsEucl=526; rNSW=245; rank_mean=399.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 62 62 61 1 11 0 39 c 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 24 21 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59 11 0 14 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 41 6

DAG2_MA1271.1_JASPAR_shift8 (DAG2:MA1271.1:JASPAR) 0.777 0.706 8.643 0.900 0.899 636 101 16 603 656 402.400
; assembly_12 versus DAG2_MA1271.1_JASPAR (DAG2:MA1271.1:JASPAR); m=33/115; ncol2=11; w=0; offset=0; strand=D; shift=8; score= 402.4; --------sAAAAAGkdr ; cor=0.777; Ncor=0.706; logoDP=8.643; NsEucl=0.900; NSW=0.899; rcor=636; rNcor=101; rlogoDP=16; rNsEucl=603; rNSW=656; rank_mean=402.400; match_rank= a 0 0 0 0 0 0 0 0 123 492 471 600 600 597 0 13 206 390 c 0 0 0 0 0 0 0 0 188 31 0 0 0 0 0 37 45 10 g 0 0 0 0 0 0 0 0 175 51 0 0 0 3 600 185 152 156 t 0 0 0 0 0 0 0 0 114 26 129 0 0 0 0 365 197 44

DOF4.5_MA1269.2_JASPAR_shift9 (DOF4.5:MA1269.2:JASPAR) 0.821 0.528 8.174 0.903 0.915 392 606 40 541 475 410.800
; assembly_12 versus DOF4.5_MA1269.2_JASPAR (DOF4.5:MA1269.2:JASPAR); m=34/115; ncol2=13; w=0; offset=1; strand=D; shift=9; score= 410.8; ---------awAAAGtwr ; cor=0.821; Ncor=0.528; logoDP=8.174; NsEucl=0.903; NSW=0.915; rcor=392; rNcor=606; rlogoDP=40; rNsEucl=541; rNSW=475; rank_mean=410.800; match_rank= a 0 0 0 0 0 0 0 0 0 402 349 600 600 600 0 104 282 235 c 0 0 0 0 0 0 0 0 0 72 7 0 0 0 0 125 15 54 g 0 0 0 0 0 0 0 0 0 47 27 0 0 0 600 57 135 233 t 0 0 0 0 0 0 0 0 0 79 217 0 0 0 0 314 168 78

DOF1_PBF1_Mo17_1_EEAD0326_EEADannot_shift4 (DOF1_PBF1_Mo17_1:EEAD0326:EEADannot) 0.799 0.533 8.203 0.906 0.911 505 592 38 470 508 422.600
; assembly_12 versus DOF1_PBF1_Mo17_1_EEAD0326_EEADannot (DOF1_PBF1_Mo17_1:EEAD0326:EEADannot); m=35/115; ncol2=15; w=-4; offset=-4; strand=D; shift=4; score= 422.6; ----acrsyaAAAAGkwA ; cor=0.799; Ncor=0.533; logoDP=8.203; NsEucl=0.906; NSW=0.911; rcor=505; rNcor=592; rlogoDP=38; rNsEucl=470; rNSW=508; rank_mean=422.600; match_rank= a 0 0 0 0 60 23 31 14 10 64 83 100 97 97 0 1 36 72 c 0 0 0 0 10 44 10 26 38 12 2 0 0 0 0 10 23 5 g 0 0 0 0 14 14 43 50 14 20 3 0 0 3 100 34 9 20 t 0 0 0 0 16 19 16 10 38 4 12 0 3 0 0 55 32 3

GTL1_MA1661.2_JASPAR_shift6 (GTL1:MA1661.2:JASPAR) 0.883 0.442 5.761 0.898 0.938 148 924 258 627 207 432.800
; assembly_12 versus GTL1_MA1661.2_JASPAR (GTL1:MA1661.2:JASPAR); m=36/115; ncol2=8; w=-2; offset=-2; strand=D; shift=6; score= 432.8; ------GGTwAAAA---- ; cor=0.883; Ncor=0.442; logoDP=5.761; NsEucl=0.898; NSW=0.938; rcor=148; rNcor=924; rlogoDP=258; rNsEucl=627; rNSW=207; rank_mean=432.800; match_rank= a 0 0 0 0 0 0 24 42 48 300 1038 1033 996 954 0 0 0 0 c 0 0 0 0 0 0 7 5 3 17 5 13 11 18 0 0 0 0 g 0 0 0 0 0 0 1023 1020 93 74 12 10 13 23 0 0 0 0 t 0 0 0 0 0 0 19 6 929 682 18 17 53 78 0 0 0 0

AT5G63260.ampDAP_M0343_AthalianaCistrome_shift8 (AT5G63260.ampDAP:M0343:AthalianaCistrome) 0.769 0.699 8.628 0.897 0.893 673 107 18 658 714 434.000
; assembly_12 versus AT5G63260.ampDAP_M0343_AthalianaCistrome (AT5G63260.ampDAP:M0343:AthalianaCistrome); m=37/115; ncol2=11; w=0; offset=0; strand=D; shift=8; score= 434; --------sAAAAAGTda ; cor=0.769; Ncor=0.699; logoDP=8.628; NsEucl=0.897; NSW=0.893; rcor=673; rNcor=107; rlogoDP=18; rNsEucl=658; rNSW=714; rank_mean=434.000; match_rank= a 0 0 0 0 0 0 0 0 101 547 502 594 600 591 0 5 205 407 c 0 0 0 0 0 0 0 0 199 0 1 6 0 0 0 45 31 29 g 0 0 0 0 0 0 0 0 173 29 0 0 0 9 600 135 165 93 t 0 0 0 0 0 0 0 0 127 24 97 0 0 0 0 415 199 71

At4g38000.ampDAP_M0275_AthalianaCistrome_shift8 (At4g38000.ampDAP:M0275:AthalianaCistrome) 0.765 0.696 8.538 0.897 0.893 695 112 23 656 712 439.600
; assembly_12 versus At4g38000.ampDAP_M0275_AthalianaCistrome (At4g38000.ampDAP:M0275:AthalianaCistrome); m=38/115; ncol2=11; w=0; offset=0; strand=D; shift=8; score= 439.6; --------sAWAAAGTwa ; cor=0.765; Ncor=0.696; logoDP=8.538; NsEucl=0.897; NSW=0.893; rcor=695; rNcor=112; rlogoDP=23; rNsEucl=656; rNSW=712; rank_mean=439.600; match_rank= a 0 0 0 0 0 0 0 0 131 524 423 599 599 599 0 20 231 346 c 0 0 0 0 0 0 0 0 181 23 0 0 0 0 0 46 35 35 g 0 0 0 0 0 0 0 0 213 24 0 0 0 0 599 110 74 145 t 0 0 0 0 0 0 0 0 74 28 176 0 0 0 0 423 259 73

AT5G63260.DAP_M0340_AthalianaCistrome_shift8 (AT5G63260.DAP:M0340:AthalianaCistrome) 0.761 0.692 8.523 0.897 0.893 712 116 25 659 715 445.400
; assembly_12 versus AT5G63260.DAP_M0340_AthalianaCistrome (AT5G63260.DAP:M0340:AthalianaCistrome); m=39/115; ncol2=11; w=0; offset=0; strand=D; shift=8; score= 445.4; --------sAWAAAGKdr ; cor=0.761; Ncor=0.692; logoDP=8.523; NsEucl=0.897; NSW=0.893; rcor=712; rNcor=116; rlogoDP=25; rNsEucl=659; rNSW=715; rank_mean=445.400; match_rank= a 0 0 0 0 0 0 0 0 109 453 433 600 600 599 0 0 191 380 c 0 0 0 0 0 0 0 0 163 28 0 0 0 0 0 25 41 6 g 0 0 0 0 0 0 0 0 197 70 0 0 0 1 600 164 154 176 t 0 0 0 0 0 0 0 0 131 49 167 0 0 0 0 411 214 38

OBP4.ampDAP_M0261_AthalianaCistrome_shift2 (OBP4.ampDAP:M0261:AthalianaCistrome) 0.810 0.426 8.530 0.908 0.915 456 973 24 430 476 471.800
; assembly_12 versus OBP4.ampDAP_M0261_AthalianaCistrome (OBP4.ampDAP:M0261:AthalianaCistrome); m=40/115; ncol2=19; w=-6; offset=-6; strand=D; shift=2; score= 471.8; --waaaaacAAAAAGtwa ; cor=0.810; Ncor=0.426; logoDP=8.530; NsEucl=0.908; NSW=0.915; rcor=456; rNcor=973; rlogoDP=24; rNsEucl=430; rNSW=476; rank_mean=471.800; match_rank= a 0 0 283 256 298 328 243 221 145 527 483 600 600 583 0 54 263 344 c 0 0 64 79 70 75 88 119 203 6 0 0 0 0 0 84 37 42 g 0 0 81 127 94 111 146 137 143 31 0 0 0 17 600 135 88 130 t 0 0 172 138 138 86 123 123 109 36 117 0 0 0 0 327 212 84

DOF24_B73_2_m1_EEAD0327_EEADannot_rc_shift9 (DOF24_B73_2_m1:EEAD0327:EEADannot_rc) 0.854 0.480 2.907 0.910 0.928 250 780 657 380 320 477.400
; assembly_12 versus DOF24_B73_2_m1_EEAD0327_EEADannot_rc (DOF24_B73_2_m1:EEAD0327:EEADannot_rc); m=41/115; ncol2=15; w=0; offset=1; strand=R; shift=9; score= 477.4; ---------AAAAAGbwr ; cor=0.854; Ncor=0.480; logoDP=2.907; NsEucl=0.910; NSW=0.928; rcor=250; rNcor=780; rlogoDP=657; rNsEucl=380; rNSW=320; rank_mean=477.400; match_rank= a 0 0 0 0 0 0 0 0 0 74 91 100 99 98 5 3 31 58 c 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 27 6 1 g 0 0 0 0 0 0 0 0 0 15 2 0 0 2 95 28 7 39 t 0 0 0 0 0 0 0 0 0 4 7 0 1 0 0 42 56 2

At1g64620.DAP_M0263_AthalianaCistrome_shift2 (At1g64620.DAP:M0263:AthalianaCistrome) 0.806 0.424 8.906 0.906 0.912 471 982 12 465 502 486.400
; assembly_12 versus At1g64620.DAP_M0263_AthalianaCistrome (At1g64620.DAP:M0263:AthalianaCistrome); m=42/115; ncol2=19; w=-6; offset=-6; strand=D; shift=2; score= 486.4; --wwaaaamAAAAAGkwa ; cor=0.806; Ncor=0.424; logoDP=8.906; NsEucl=0.906; NSW=0.912; rcor=471; rNcor=982; rlogoDP=12; rNsEucl=465; rNSW=502; rank_mean=486.400; match_rank= a 0 0 303 255 282 299 288 213 177 507 513 600 600 600 0 53 233 406 c 0 0 50 64 88 67 80 111 169 27 0 0 0 0 0 61 28 13 g 0 0 80 109 109 105 113 137 128 47 0 0 0 0 600 168 106 125 t 0 0 167 172 121 129 119 139 126 19 87 0 0 0 0 318 233 56

C3H67_UN0851.1_JASPAR_shift9 (C3H67:UN0851.1:JASPAR) 0.777 0.636 8.635 0.887 0.886 632 224 17 811 793 495.400
; assembly_12 versus C3H67_UN0851.1_JASPAR (C3H67:UN0851.1:JASPAR); m=43/115; ncol2=10; w=0; offset=1; strand=D; shift=9; score= 495.4; ---------AAAAAGTda ; cor=0.777; Ncor=0.636; logoDP=8.635; NsEucl=0.887; NSW=0.886; rcor=632; rNcor=224; rlogoDP=17; rNsEucl=811; rNSW=793; rank_mean=495.400; match_rank= a 0 0 0 0 0 0 0 0 0 911 836 990 1000 985 0 8 341 678 c 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 75 51 48 g 0 0 0 0 0 0 0 0 0 48 0 0 0 15 1000 225 275 155 t 0 0 0 0 0 0 0 0 0 40 161 0 0 0 0 691 331 118

DOF5.6_MA0983.1_JASPAR_shift8 (DOF5.6:MA0983.1:JASPAR) 0.816 0.653 4.577 0.889 0.901 414 185 444 797 639 495.800
; assembly_12 versus DOF5.6_MA0983.1_JASPAR (DOF5.6:MA0983.1:JASPAR); m=44/115; ncol2=8; w=0; offset=0; strand=D; shift=8; score= 495.8; --------vawAAmGt-- ; cor=0.816; Ncor=0.653; logoDP=4.577; NsEucl=0.889; NSW=0.901; rcor=414; rNcor=185; rlogoDP=444; rNsEucl=797; rNSW=639; rank_mean=495.800; match_rank= a 0 0 0 0 0 0 0 0 254 364 432 955 928 613 50 152 0 0 c 0 0 0 0 0 0 0 0 257 170 84 35 40 308 28 247 0 0 g 0 0 0 0 0 0 0 0 262 227 108 1 1 56 884 213 0 0 t 0 0 0 0 0 0 0 0 228 239 376 10 32 24 38 388 0 0

DOF5.6_M0657_1.02_CISBP_shift8 (DOF5.6:M0657_1.02:CISBP) 0.816 0.653 4.564 0.888 0.900 418 186 445 802 643 498.800
; assembly_12 versus DOF5.6_M0657_1.02_CISBP (DOF5.6:M0657_1.02:CISBP); m=45/115; ncol2=8; w=0; offset=0; strand=D; shift=8; score= 498.8; --------vawAAmGy-- ; cor=0.816; Ncor=0.653; logoDP=4.564; NsEucl=0.888; NSW=0.900; rcor=418; rNcor=186; rlogoDP=445; rNsEucl=802; rNSW=643; rank_mean=498.800; match_rank= a 0 0 0 0 0 0 0 0 25 36 43 95 93 61 5 15 0 0 c 0 0 0 0 0 0 0 0 26 17 8 4 4 31 3 25 0 0 g 0 0 0 0 0 0 0 0 26 23 11 0 0 6 88 21 0 0 t 0 0 0 0 0 0 0 0 23 24 38 1 3 2 4 39 0 0

DOF1.5_MA1279.2_JASPAR_shift4 (DOF1.5:MA1279.2:JASPAR) 0.785 0.491 8.511 0.902 0.905 578 747 26 549 595 499.000
; assembly_12 versus DOF1.5_MA1279.2_JASPAR (DOF1.5:MA1279.2:JASPAR); m=46/115; ncol2=16; w=-4; offset=-4; strand=D; shift=4; score= 499; ----aaaarAAAAAGtra ; cor=0.785; Ncor=0.491; logoDP=8.511; NsEucl=0.902; NSW=0.905; rcor=578; rNcor=747; rlogoDP=26; rNsEucl=549; rNSW=595; rank_mean=499.000; match_rank= a 0 0 0 0 329 329 301 251 184 440 486 599 599 591 0 46 232 325 c 0 0 0 0 75 55 61 73 94 34 8 1 0 0 0 35 22 122 g 0 0 0 0 121 114 143 147 199 71 1 0 1 9 600 140 273 41 t 0 0 0 0 75 102 95 129 123 55 105 0 0 0 0 379 73 112

OBP4_MA1280.1_JASPAR_shift8 (OBP4:MA1280.1:JASPAR) 0.773 0.552 8.587 0.899 0.897 651 526 21 623 675 499.200
; assembly_12 versus OBP4_MA1280.1_JASPAR (OBP4:MA1280.1:JASPAR); m=47/115; ncol2=14; w=0; offset=0; strand=D; shift=8; score= 499.2; --------sAAAAAGkwa ; cor=0.773; Ncor=0.552; logoDP=8.587; NsEucl=0.899; NSW=0.897; rcor=651; rNcor=526; rlogoDP=21; rNsEucl=623; rNSW=675; rank_mean=499.200; match_rank= a 0 0 0 0 0 0 0 0 142 529 456 599 600 600 0 22 193 387 c 0 0 0 0 0 0 0 0 194 17 0 0 0 0 0 37 23 32 g 0 0 0 0 0 0 0 0 174 34 3 0 0 0 600 209 127 131 t 0 0 0 0 0 0 0 0 90 20 141 1 0 0 0 332 257 50

AT1G47655_MA1275.1_JASPAR_shift7 (AT1G47655:MA1275.1:JASPAR) 0.740 0.673 7.804 0.894 0.887 815 144 59 713 781 502.400
; assembly_12 versus AT1G47655_MA1275.1_JASPAR (AT1G47655:MA1275.1:JASPAR); m=48/115; ncol2=11; w=-1; offset=-1; strand=D; shift=7; score= 502.4; -------rsawAAAGTrr ; cor=0.740; Ncor=0.673; logoDP=7.804; NsEucl=0.894; NSW=0.887; rcor=815; rNcor=144; rlogoDP=59; rNsEucl=713; rNSW=781; rank_mean=502.400; match_rank= a 0 0 0 0 0 0 0 158 132 343 332 600 600 544 0 0 342 298 c 0 0 0 0 0 0 0 144 158 84 2 0 0 0 0 86 1 45 g 0 0 0 0 0 0 0 154 204 88 3 0 0 56 600 23 227 155 t 0 0 0 0 0 0 0 144 106 85 263 0 0 0 0 491 30 102

DAG2.ampDAP_M0266_AthalianaCistrome_shift8 (DAG2.ampDAP:M0266:AthalianaCistrome) 0.760 0.585 8.597 0.896 0.891 716 411 20 682 750 515.800
; assembly_12 versus DAG2.ampDAP_M0266_AthalianaCistrome (DAG2.ampDAP:M0266:AthalianaCistrome); m=49/115; ncol2=13; w=0; offset=0; strand=D; shift=8; score= 515.8; --------cAAAAAGkka ; cor=0.760; Ncor=0.585; logoDP=8.597; NsEucl=0.896; NSW=0.891; rcor=716; rNcor=411; rlogoDP=20; rNsEucl=682; rNSW=750; rank_mean=515.800; match_rank= a 0 0 0 0 0 0 0 0 140 529 457 598 598 596 0 1 142 403 c 0 0 0 0 0 0 0 0 191 2 0 0 0 0 0 21 70 25 g 0 0 0 0 0 0 0 0 143 42 0 0 0 2 598 214 159 122 t 0 0 0 0 0 0 0 0 124 25 141 0 0 0 0 362 227 48

OBP3.ampDAP_M0274_AthalianaCistrome_rc_shift8 (OBP3.ampDAP:M0274:AthalianaCistrome_rc) 0.851 0.448 0.334 0.920 0.935 254 899 983 233 238 521.400
; assembly_12 versus OBP3.ampDAP_M0274_AthalianaCistrome_rc (OBP3.ampDAP:M0274:AthalianaCistrome_rc); m=50/115; ncol2=19; w=0; offset=0; strand=R; shift=8; score= 521.4; --------maAAAAGtwa ; cor=0.851; Ncor=0.448; logoDP=0.334; NsEucl=0.920; NSW=0.935; rcor=254; rNcor=899; rlogoDP=983; rNsEucl=233; rNSW=238; rank_mean=521.400; match_rank= a 0 0 0 0 0 0 0 0 162 377 440 600 599 591 0 143 293 379 c 0 0 0 0 0 0 0 0 156 65 23 0 0 0 0 115 47 18 g 0 0 0 0 0 0 0 0 138 81 44 0 1 9 600 114 78 136 t 0 0 0 0 0 0 0 0 144 77 93 0 0 0 0 228 182 67

DOF4.2_MA1273.2_JASPAR_shift9 (DOF4.2:MA1273.2:JASPAR) 0.780 0.585 9.394 0.887 0.886 620 410 11 812 795 529.600
; assembly_12 versus DOF4.2_MA1273.2_JASPAR (DOF4.2:MA1273.2:JASPAR); m=51/115; ncol2=11; w=0; offset=1; strand=D; shift=9; score= 529.6; ---------AAAAAGGya ; cor=0.780; Ncor=0.585; logoDP=9.394; NsEucl=0.887; NSW=0.886; rcor=620; rNcor=410; rlogoDP=11; rNsEucl=812; rNSW=795; rank_mean=529.600; match_rank= a 0 0 0 0 0 0 0 0 0 477 580 598 598 598 0 112 89 346 c 0 0 0 0 0 0 0 0 0 38 0 0 0 0 0 0 253 60 g 0 0 0 0 0 0 0 0 0 48 0 0 0 0 598 463 28 70 t 0 0 0 0 0 0 0 0 0 35 18 0 0 0 0 23 228 122

dof45.ampDAP_M0280_AthalianaCistrome_shift8 (dof45.ampDAP:M0280:AthalianaCistrome) 0.766 0.511 7.707 0.900 0.900 690 675 70 598 650 536.600
; assembly_12 versus dof45.ampDAP_M0280_AthalianaCistrome (dof45.ampDAP:M0280:AthalianaCistrome); m=52/115; ncol2=15; w=0; offset=0; strand=D; shift=8; score= 536.6; --------aawAAAGtrr ; cor=0.766; Ncor=0.511; logoDP=7.707; NsEucl=0.900; NSW=0.900; rcor=690; rNcor=675; rlogoDP=70; rNsEucl=598; rNSW=650; rank_mean=536.600; match_rank= a 0 0 0 0 0 0 0 0 174 281 271 512 516 519 0 87 354 131 c 0 0 0 0 0 0 0 0 94 80 10 2 0 0 0 81 3 50 g 0 0 0 0 0 0 0 0 128 57 44 7 3 3 522 27 132 275 t 0 0 0 0 0 0 0 0 126 104 197 1 3 0 0 327 33 66

DOF3.4_MA1278.2_JASPAR_rc_shift9 (DOF3.4:MA1278.2:JASPAR_rc) 0.865 0.433 0.265 0.915 0.935 206 950 1027 289 236 541.600
; assembly_12 versus DOF3.4_MA1278.2_JASPAR_rc (DOF3.4:MA1278.2:JASPAR_rc); m=53/115; ncol2=17; w=0; offset=1; strand=R; shift=9; score= 541.6; ---------aAAAAGywr ; cor=0.865; Ncor=0.433; logoDP=0.265; NsEucl=0.915; NSW=0.935; rcor=206; rNcor=950; rlogoDP=1027; rNsEucl=289; rNSW=236; rank_mean=541.600; match_rank= a 0 0 0 0 0 0 0 0 0 332 426 600 593 586 0 93 303 367 c 0 0 0 0 0 0 0 0 0 104 0 0 0 0 0 157 43 17 g 0 0 0 0 0 0 0 0 0 105 29 0 7 14 600 146 93 169 t 0 0 0 0 0 0 0 0 0 59 145 0 0 0 0 204 161 47

AT3G52440_MA1276.1_JASPAR_shift8 (AT3G52440:MA1276.1:JASPAR) 0.728 0.662 8.288 0.890 0.880 895 170 35 769 842 542.200
; assembly_12 versus AT3G52440_MA1276.1_JASPAR (AT3G52440:MA1276.1:JASPAR); m=54/115; ncol2=11; w=0; offset=0; strand=D; shift=8; score= 542.2; --------sAwAAAGkda ; cor=0.728; Ncor=0.662; logoDP=8.288; NsEucl=0.890; NSW=0.880; rcor=895; rNcor=170; rlogoDP=35; rNsEucl=769; rNSW=842; rank_mean=542.200; match_rank= a 0 0 0 0 0 0 0 0 107 467 348 599 599 599 0 2 169 348 c 0 0 0 0 0 0 0 0 206 4 0 0 0 0 0 6 31 48 g 0 0 0 0 0 0 0 0 187 103 0 0 0 0 599 219 198 136 t 0 0 0 0 0 0 0 0 99 25 251 0 0 0 0 372 201 67

AT1G47655.ampDAP_M0271_AthalianaCistrome_rc_shift7 (AT1G47655.ampDAP:M0271:AthalianaCistrome_rc) 0.815 0.543 0.380 0.911 0.921 422 562 966 358 404 542.400
; assembly_12 versus AT1G47655.ampDAP_M0271_AthalianaCistrome_rc (AT1G47655.ampDAP:M0271:AthalianaCistrome_rc); m=55/115; ncol2=15; w=-1; offset=-1; strand=R; shift=7; score= 542.4; -------araaAAAGaaA ; cor=0.815; Ncor=0.543; logoDP=0.380; NsEucl=0.911; NSW=0.921; rcor=422; rNcor=562; rlogoDP=966; rNsEucl=358; rNSW=404; rank_mean=542.400; match_rank= a 0 0 0 0 0 0 0 264 197 352 353 516 559 529 15 210 348 424 c 0 0 0 0 0 0 0 72 138 82 61 0 0 0 5 134 79 12 g 0 0 0 0 0 0 0 119 183 108 63 51 12 42 551 97 66 120 t 0 0 0 0 0 0 0 116 53 29 94 4 0 0 0 130 78 15

DAG2_DAG2_ArabidopsisPBM_shift8 (DAG2:DAG2:ArabidopsisPBM) 0.723 0.723 6.845 0.892 0.883 918 66 164 747 821 543.200
; assembly_12 versus DAG2_DAG2_ArabidopsisPBM (DAG2:DAG2:ArabidopsisPBM); m=56/115; ncol2=10; w=0; offset=0; strand=D; shift=8; score= 543.2; --------sAwAARGTgr ; cor=0.723; Ncor=0.723; logoDP=6.845; NsEucl=0.892; NSW=0.883; rcor=918; rNcor=66; rlogoDP=164; rNsEucl=747; rNSW=821; rank_mean=543.200; match_rank= a 0 0 0 0 0 0 0 0 16 75 60 99 98 74 0 1 24 39 c 0 0 0 0 0 0 0 0 41 3 0 0 0 1 0 20 4 18 g 0 0 0 0 0 0 0 0 31 18 1 0 1 25 98 6 56 30 t 0 0 0 0 0 0 0 0 12 4 39 1 1 0 2 73 16 13

BBX31.DAP_M0718_AthalianaCistrome_shift9 (BBX31.DAP:M0718:AthalianaCistrome) 0.802 0.451 8.203 0.895 0.902 491 885 37 683 626 544.400
; assembly_12 versus BBX31.DAP_M0718_AthalianaCistrome (BBX31.DAP:M0718:AthalianaCistrome); m=57/115; ncol2=15; w=0; offset=1; strand=D; shift=9; score= 544.4; ---------AAAAAGtaA ; cor=0.802; Ncor=0.451; logoDP=8.203; NsEucl=0.895; NSW=0.902; rcor=491; rNcor=885; rlogoDP=37; rNsEucl=683; rNSW=626; rank_mean=544.400; match_rank= a 0 0 0 0 0 0 0 0 0 477 483 600 600 548 0 118 342 464 c 0 0 0 0 0 0 0 0 0 26 1 0 0 0 0 94 23 1 g 0 0 0 0 0 0 0 0 0 66 1 0 0 52 600 66 95 114 t 0 0 0 0 0 0 0 0 0 31 115 0 0 0 0 322 140 21

dof24.ampDAP_M0269_AthalianaCistrome_shift3 (dof24.ampDAP:M0269:AthalianaCistrome) 0.765 0.510 8.357 0.897 0.894 692 680 33 652 703 552.000
; assembly_12 versus dof24.ampDAP_M0269_AthalianaCistrome (dof24.ampDAP:M0269:AthalianaCistrome); m=58/115; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score= 552; ---wwaaacAWAAAGTda ; cor=0.765; Ncor=0.510; logoDP=8.357; NsEucl=0.897; NSW=0.894; rcor=692; rNcor=680; rlogoDP=33; rNsEucl=652; rNSW=703; rank_mean=552.000; match_rank= a 0 0 0 261 265 287 237 233 122 551 433 597 597 580 0 10 215 324 c 0 0 0 80 63 76 93 122 202 0 0 0 0 0 0 55 32 38 g 0 0 0 102 107 95 134 126 137 29 0 0 0 17 597 120 173 146 t 0 0 0 154 162 139 133 116 136 17 164 0 0 0 0 412 177 89

CDF3.DAP_M0268_AthalianaCistrome_shift2 (CDF3.DAP:M0268:AthalianaCistrome) 0.785 0.413 8.665 0.902 0.904 580 1025 15 561 606 557.400
; assembly_12 versus CDF3.DAP_M0268_AthalianaCistrome (CDF3.DAP:M0268:AthalianaCistrome); m=59/115; ncol2=19; w=-6; offset=-6; strand=D; shift=2; score= 557.4; --aaaaargAAAAAGtra ; cor=0.785; Ncor=0.413; logoDP=8.665; NsEucl=0.902; NSW=0.904; rcor=580; rNcor=1025; rlogoDP=15; rNsEucl=561; rNSW=606; rank_mean=557.400; match_rank= a 0 0 353 339 333 301 272 195 142 455 512 600 600 584 0 29 165 317 c 0 0 53 27 47 36 73 93 144 31 0 0 0 0 0 56 20 141 g 0 0 71 117 113 149 137 178 175 79 3 0 0 16 600 131 328 27 t 0 0 123 117 107 114 118 134 139 35 85 0 0 0 0 384 87 115

DOF24_Mo17_1_EEAD0328_EEADannot_rc_shift9 (DOF24_Mo17_1:EEAD0328:EEADannot_rc) 0.815 0.458 4.337 0.900 0.911 424 857 467 586 513 569.400
; assembly_12 versus DOF24_Mo17_1_EEAD0328_EEADannot_rc (DOF24_Mo17_1:EEAD0328:EEADannot_rc); m=60/115; ncol2=15; w=0; offset=1; strand=R; shift=9; score= 569.4; ---------rAAAAGkwR ; cor=0.815; Ncor=0.458; logoDP=4.337; NsEucl=0.900; NSW=0.911; rcor=424; rNcor=857; rlogoDP=467; rNsEucl=586; rNSW=513; rank_mean=569.400; match_rank= a 0 0 0 0 0 0 0 0 0 60 86 99 100 92 9 4 29 71 c 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 16 8 0 g 0 0 0 0 0 0 0 0 0 30 8 0 0 8 86 46 4 28 t 0 0 0 0 0 0 0 0 0 5 5 1 0 0 5 34 59 1

ORE_EEAD0012_EEADannot_shift7 (ORE:EEAD0012:EEADannot) 0.764 0.625 10.142 0.876 0.861 703 267 1 933 993 579.400
; assembly_12 versus ORE_EEAD0012_EEADannot (ORE:EEAD0012:EEADannot); m=61/115; ncol2=10; w=-1; offset=-1; strand=D; shift=7; score= 579.4; -------sGGAAAAGyw- ; cor=0.764; Ncor=0.625; logoDP=10.142; NsEucl=0.876; NSW=0.861; rcor=703; rNcor=267; rlogoDP=1; rNsEucl=933; rNSW=993; rank_mean=579.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 100 100 100 100 0 0 50 0 c 0 0 0 0 0 0 0 50 0 0 0 0 0 0 0 50 0 0 g 0 0 0 0 0 0 0 50 100 100 0 0 0 0 100 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50 50 0

AT2G28810.ampDAP_M0245_AthalianaCistrome_rc_shift4 (AT2G28810.ampDAP:M0245:AthalianaCistrome_rc) 0.806 0.537 0.371 0.908 0.914 475 578 969 437 482 588.200
; assembly_12 versus AT2G28810.ampDAP_M0245_AthalianaCistrome_rc (AT2G28810.ampDAP:M0245:AthalianaCistrome_rc); m=62/115; ncol2=15; w=-4; offset=-4; strand=R; shift=4; score= 588.2; ----aaarsAWAAAGtra ; cor=0.806; Ncor=0.537; logoDP=0.371; NsEucl=0.908; NSW=0.914; rcor=475; rNcor=578; rlogoDP=969; rNsEucl=437; rNSW=482; rank_mean=588.200; match_rank= a 0 0 0 0 336 305 256 213 118 513 449 600 600 562 0 76 273 371 c 0 0 0 0 45 60 106 94 195 1 0 0 0 0 0 110 57 48 g 0 0 0 0 87 140 143 167 185 78 0 0 0 38 600 137 154 124 t 0 0 0 0 132 95 95 126 102 8 151 0 0 0 0 277 116 57

ONAC127_UN0430.2_JASPAR_shift7 (ONAC127:UN0430.2:JASPAR) 0.813 0.518 5.460 0.879 0.898 434 655 302 898 671 592.000
; assembly_12 versus ONAC127_UN0430.2_JASPAR (ONAC127:UN0430.2:JASPAR); m=63/115; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score= 592; -------AAGAAAAG--- ; cor=0.813; Ncor=0.518; logoDP=5.460; NsEucl=0.879; NSW=0.898; rcor=434; rNcor=655; rlogoDP=302; rNsEucl=898; rNSW=671; rank_mean=592.000; match_rank= a 0 0 0 0 0 0 0 65 67 4 57 61 63 58 3 0 0 0 c 0 0 0 0 0 0 0 0 0 0 2 5 0 1 7 0 0 0 g 0 0 0 0 0 0 0 0 0 62 7 1 5 3 56 0 0 0 t 0 0 0 0 0 0 0 3 1 2 2 1 0 6 2 0 0 0

DOF5.4_MA1280.2_JASPAR_shift9 (DOF5.4:MA1280.2:JASPAR) 0.796 0.557 8.573 0.866 0.873 520 514 22 1000 909 593.000
; assembly_12 versus DOF5.4_MA1280.2_JASPAR (DOF5.4:MA1280.2:JASPAR); m=64/115; ncol2=7; w=0; offset=1; strand=D; shift=9; score= 593; ---------AAAAAGk-- ; cor=0.796; Ncor=0.557; logoDP=8.573; NsEucl=0.866; NSW=0.873; rcor=520; rNcor=514; rlogoDP=22; rNsEucl=1000; rNSW=909; rank_mean=593.000; match_rank= a 0 0 0 0 0 0 0 0 0 529 456 599 600 600 0 22 0 0 c 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 37 0 0 g 0 0 0 0 0 0 0 0 0 34 3 0 0 0 600 209 0 0 t 0 0 0 0 0 0 0 0 0 20 141 1 0 0 0 332 0 0

dof4.2_MA1273.1_JASPAR_shift4 (dof4.2:MA1273.1:JASPAR) 0.779 0.410 9.395 0.898 0.896 621 1042 10 635 686 598.800
; assembly_12 versus dof4.2_MA1273.1_JASPAR (dof4.2:MA1273.1:JASPAR); m=65/115; ncol2=19; w=-4; offset=-4; strand=D; shift=4; score= 598.8; ----aaaarAAAAAGGya ; cor=0.779; Ncor=0.410; logoDP=9.395; NsEucl=0.898; NSW=0.896; rcor=621; rNcor=1042; rlogoDP=10; rNsEucl=635; rNSW=686; rank_mean=598.800; match_rank= a 0 0 0 0 288 281 303 236 214 477 580 598 598 598 0 112 89 346 c 0 0 0 0 70 98 73 75 110 38 0 0 0 0 0 0 253 60 g 0 0 0 0 106 96 108 145 166 48 0 0 0 0 598 463 28 70 t 0 0 0 0 134 123 114 142 108 35 18 0 0 0 0 23 228 122

e_gw1.149.93.1_M0658_1.02_CISBP_shift8 (e_gw1.149.93.1:M0658_1.02:CISBP) 0.835 0.668 1.770 0.877 0.879 324 156 764 910 845 599.800
; assembly_12 versus e_gw1.149.93.1_M0658_1.02_CISBP (e_gw1.149.93.1:M0658_1.02:CISBP); m=66/115; ncol2=8; w=0; offset=0; strand=D; shift=8; score= 599.8; --------vrwaAmGy-- ; cor=0.835; Ncor=0.668; logoDP=1.770; NsEucl=0.877; NSW=0.879; rcor=324; rNcor=156; rlogoDP=764; rNsEucl=910; rNSW=845; rank_mean=599.800; match_rank= a 0 0 0 0 0 0 0 0 26 33 40 65 70 57 8 17 0 0 c 0 0 0 0 0 0 0 0 26 20 14 13 11 25 8 26 0 0 g 0 0 0 0 0 0 0 0 26 25 16 8 5 0 76 23 0 0 t 0 0 0 0 0 0 0 0 22 22 30 14 14 18 8 34 0 0

MBD2_MA2370.1_JASPAR_shift13 (MBD2:MA2370.1:JASPAR) 0.845 0.423 3.398 0.882 0.931 278 997 589 869 287 604.000
; assembly_12 versus MBD2_MA2370.1_JASPAR (MBD2:MA2370.1:JASPAR); m=67/115; ncol2=5; w=0; offset=5; strand=D; shift=13; score= 604; -------------AGCTr ; cor=0.845; Ncor=0.423; logoDP=3.398; NsEucl=0.882; NSW=0.931; rcor=278; rNcor=997; rlogoDP=589; rNsEucl=869; rNSW=287; rank_mean=604.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 808 0 190 98 315 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 808 0 27 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 900 0 0 432 t 0 0 0 0 0 0 0 0 0 0 0 0 0 190 98 0 900 224

TREE1_MA1801.2_JASPAR_shift13 (TREE1:MA1801.2:JASPAR) 0.845 0.422 3.391 0.882 0.931 279 998 591 870 288 605.200
; assembly_12 versus TREE1_MA1801.2_JASPAR (TREE1:MA1801.2:JASPAR); m=68/115; ncol2=5; w=0; offset=5; strand=D; shift=13; score= 605.2; -------------AGCTr ; cor=0.845; Ncor=0.422; logoDP=3.391; NsEucl=0.882; NSW=0.931; rcor=279; rNcor=998; rlogoDP=591; rNsEucl=870; rNSW=288; rank_mean=605.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 809 0 191 99 316 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 809 0 27 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 901 0 0 433 t 0 0 0 0 0 0 0 0 0 0 0 0 0 191 99 0 901 224

At3g45610.ampDAP_M0254_AthalianaCistrome_rc_shift8 (At3g45610.ampDAP:M0254:AthalianaCistrome_rc) 0.801 0.534 0.358 0.906 0.911 500 587 975 473 510 609.000
; assembly_12 versus At3g45610.ampDAP_M0254_AthalianaCistrome_rc (At3g45610.ampDAP:M0254:AthalianaCistrome_rc); m=69/115; ncol2=15; w=0; offset=0; strand=R; shift=8; score= 609; --------sAAAAAGkwa ; cor=0.801; Ncor=0.534; logoDP=0.358; NsEucl=0.906; NSW=0.911; rcor=500; rNcor=587; rlogoDP=975; rNsEucl=473; rNSW=510; rank_mean=609.000; match_rank= a 0 0 0 0 0 0 0 0 115 498 460 600 600 599 0 59 223 407 c 0 0 0 0 0 0 0 0 222 28 2 0 0 0 0 83 70 26 g 0 0 0 0 0 0 0 0 196 61 0 0 0 1 600 198 101 128 t 0 0 0 0 0 0 0 0 67 13 138 0 0 0 0 260 206 39

DOF4.3_MA1747.1_JASPAR_shift9 (DOF4.3:MA1747.1:JASPAR) 0.770 0.462 7.879 0.891 0.893 670 846 54 759 721 610.000
; assembly_12 versus DOF4.3_MA1747.1_JASPAR (DOF4.3:MA1747.1:JASPAR); m=70/115; ncol2=14; w=0; offset=1; strand=D; shift=9; score= 610; ---------awAAAGwrg ; cor=0.770; Ncor=0.462; logoDP=7.879; NsEucl=0.891; NSW=0.893; rcor=670; rNcor=846; rlogoDP=54; rNsEucl=759; rNSW=721; rank_mean=610.000; match_rank= a 0 0 0 0 0 0 0 0 0 393 434 1000 1000 1000 0 302 578 188 c 0 0 0 0 0 0 0 0 0 203 63.793 0 0 0 0 178 1.724 147 g 0 0 0 0 0 0 0 0 0 186 116 0 0 0 1000 91.379 345 570.69 t 0 0 0 0 0 0 0 0 0 217 386 0 0 0 0 429.31 75.862 94.828

DOF3.2_MA1270.2_JASPAR_rc_shift2 (DOF3.2:MA1270.2:JASPAR_rc) 0.812 0.507 0.246 0.909 0.916 443 697 1043 415 459 611.400
; assembly_12 versus DOF3.2_MA1270.2_JASPAR_rc (DOF3.2:MA1270.2:JASPAR_rc); m=71/115; ncol2=16; w=-6; offset=-6; strand=R; shift=2; score= 611.4; --aaaarrsAAAAAGtwr ; cor=0.812; Ncor=0.507; logoDP=0.246; NsEucl=0.909; NSW=0.916; rcor=443; rNcor=697; rlogoDP=1043; rNsEucl=415; rNSW=459; rank_mean=611.400; match_rank= a 0 0 327 328 397 363 267 153 120 496 465 600 599 600 0 58 285 323 c 0 0 55 48 59 56 57 107 176 10 0 0 1 0 0 85 27 51 g 0 0 92 120 55 98 189 211 175 55 0 0 0 0 600 138 111 151 t 0 0 126 104 89 83 87 129 129 39 135 0 0 0 0 319 177 75

CDF3.ampDAP_M0259_AthalianaCistrome_rc_shift1 (CDF3.ampDAP:M0259:AthalianaCistrome_rc) 0.816 0.453 0.292 0.911 0.920 416 882 1005 375 422 620.000
; assembly_12 versus CDF3.ampDAP_M0259_AthalianaCistrome_rc (CDF3.ampDAP:M0259:AthalianaCistrome_rc); m=72/115; ncol2=18; w=-7; offset=-7; strand=R; shift=1; score= 620; -aAAAardraAAAAGtrm ; cor=0.816; Ncor=0.453; logoDP=0.292; NsEucl=0.911; NSW=0.920; rcor=416; rNcor=882; rlogoDP=1005; rNsEucl=375; rNSW=422; rank_mean=620.000; match_rank= a 0 340 409 432 439 352 247 203 161 343 491 600 600 567 0 78 229 305 c 0 78 38 23 26 46 73 81 121 70 13 0 0 0 0 89 11 160 g 0 76 80 97 89 132 202 156 203 110 20 0 0 33 600 57 278 42 t 0 106 73 48 46 70 78 160 115 77 76 0 0 0 0 376 82 93

DOF1.6_MA1275.2_JASPAR_shift9 (DOF1.6:MA1275.2:JASPAR) 0.751 0.601 7.801 0.871 0.867 769 347 60 968 958 620.400
; assembly_12 versus DOF1.6_MA1275.2_JASPAR (DOF1.6:MA1275.2:JASPAR); m=73/115; ncol2=8; w=0; offset=1; strand=D; shift=9; score= 620.4; ---------awAAAGTr- ; cor=0.751; Ncor=0.601; logoDP=7.801; NsEucl=0.871; NSW=0.867; rcor=769; rNcor=347; rlogoDP=60; rNsEucl=968; rNSW=958; rank_mean=620.400; match_rank= a 0 0 0 0 0 0 0 0 0 343 332 600 600 544 0 0 342 0 c 0 0 0 0 0 0 0 0 0 84 2 0 0 0 0 86 1 0 g 0 0 0 0 0 0 0 0 0 88 3 0 0 56 600 23 227 0 t 0 0 0 0 0 0 0 0 0 85 263 0 0 0 0 491 30 0

TAGL1_UN0426.1_JASPAR_shift5 (TAGL1:UN0426.1:JASPAR) 0.735 0.565 7.247 0.889 0.877 856 480 118 784 870 621.600
; assembly_12 versus TAGL1_UN0426.1_JASPAR (TAGL1:UN0426.1:JASPAR); m=74/115; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score= 621.6; -----waagAAAAAGGaa ; cor=0.735; Ncor=0.565; logoDP=7.247; NsEucl=0.889; NSW=0.877; rcor=856; rNcor=480; rlogoDP=118; rNsEucl=784; rNSW=870; rank_mean=621.600; match_rank= a 0 0 0 0 0 2178 2082 2930 1091 4576 4641 4647 4590 4562 320 461 2263 2526 c 0 0 0 0 0 657 806 676 351 61 47 23 14 37 46 83 587 536 g 0 0 0 0 0 789 785 401 2722 106 85 83 109 85 4328 4129 893 797 t 0 0 0 0 0 1227 1178 844 687 108 78 98 138 167 157 178 1108 992

TRANSCRIPTION_1qn9_B_3D-footprint_shift7 (TRANSCRIPTION:1qn9_B:3D-footprint) 0.803 0.511 6.649 0.872 0.885 490 677 186 960 797 622.000
; assembly_12 versus TRANSCRIPTION_1qn9_B_3D-footprint (TRANSCRIPTION:1qn9_B:3D-footprint); m=75/115; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score= 622; -------TACAAaAG--- ; cor=0.803; Ncor=0.511; logoDP=6.649; NsEucl=0.872; NSW=0.885; rcor=490; rNcor=677; rlogoDP=186; rNsEucl=960; rNSW=797; rank_mean=622.000; match_rank= a 0 0 0 0 0 0 0 11 96 0 96 96 63 96 11 0 0 0 c 0 0 0 0 0 0 0 8 0 96 0 0 17 0 8 0 0 0 g 0 0 0 0 0 0 0 8 0 0 0 0 8 0 69 0 0 0 t 0 0 0 0 0 0 0 69 0 0 0 0 8 0 8 0 0 0

DOF2.4_MA0982.1_JASPAR_shift9 (DOF2.4:MA0982.1:JASPAR) 0.833 0.583 2.871 0.870 0.882 335 415 659 973 827 641.800
; assembly_12 versus DOF2.4_MA0982.1_JASPAR (DOF2.4:MA0982.1:JASPAR); m=76/115; ncol2=7; w=0; offset=1; strand=D; shift=9; score= 641.8; ---------awAAmGt-- ; cor=0.833; Ncor=0.583; logoDP=2.871; NsEucl=0.870; NSW=0.882; rcor=335; rNcor=415; rlogoDP=659; rNsEucl=973; rNSW=827; rank_mean=641.800; match_rank= a 0 0 0 0 0 0 0 0 0 381 426 807 815 658 81 177 0 0 c 0 0 0 0 0 0 0 0 0 171 90 71 66 252 73 242 0 0 g 0 0 0 0 0 0 0 0 0 233 127 18 1 16 762 210 0 0 t 0 0 0 0 0 0 0 0 0 215 356 104 118 75 84 371 0 0

ATDOF2.4_M0648_1.02_CISBP_shift9 (ATDOF2.4:M0648_1.02:CISBP) 0.831 0.582 2.871 0.870 0.881 345 419 661 975 833 646.600
; assembly_12 versus ATDOF2.4_M0648_1.02_CISBP (ATDOF2.4:M0648_1.02:CISBP); m=77/115; ncol2=7; w=0; offset=1; strand=D; shift=9; score= 646.6; ---------awAAmGt-- ; cor=0.831; Ncor=0.582; logoDP=2.871; NsEucl=0.870; NSW=0.881; rcor=345; rNcor=419; rlogoDP=661; rNsEucl=975; rNSW=833; rank_mean=646.600; match_rank= a 0 0 0 0 0 0 0 0 0 38 42 81 81 66 9 18 0 0 c 0 0 0 0 0 0 0 0 0 17 9 7 7 25 7 24 0 0 g 0 0 0 0 0 0 0 0 0 23 13 2 0 1 76 21 0 0 t 0 0 0 0 0 0 0 0 0 22 36 10 12 8 8 37 0 0

dof43.ampDAP_M0253_AthalianaCistrome_rc_shift9 (dof43.ampDAP:M0253:AthalianaCistrome_rc) 0.770 0.462 5.983 0.891 0.893 671 847 232 760 723 646.600
; assembly_12 versus dof43.ampDAP_M0253_AthalianaCistrome_rc (dof43.ampDAP:M0253:AthalianaCistrome_rc); m=78/115; ncol2=14; w=0; offset=1; strand=R; shift=9; score= 646.6; ---------awAAAGwrg ; cor=0.770; Ncor=0.462; logoDP=5.983; NsEucl=0.891; NSW=0.893; rcor=671; rNcor=847; rlogoDP=232; rNsEucl=760; rNSW=723; rank_mean=646.600; match_rank= a 0 0 0 0 0 0 0 0 0 228 252 580 580 580 0 175 335 109 c 0 0 0 0 0 0 0 0 0 118 37 0 0 0 0 103 1 85 g 0 0 0 0 0 0 0 0 0 108 67 0 0 0 580 53 200 331 t 0 0 0 0 0 0 0 0 0 126 224 0 0 0 0 249 44 55

DOF4.7_MA2380.1_JASPAR_rc_shift9 (DOF4.7:MA2380.1:JASPAR_rc) 0.774 0.697 0.705 0.888 0.887 649 111 903 808 786 651.400
; assembly_12 versus DOF4.7_MA2380.1_JASPAR_rc (DOF4.7:MA2380.1:JASPAR_rc); m=79/115; ncol2=9; w=0; offset=1; strand=R; shift=9; score= 651.4; ---------AWAAAGTwa ; cor=0.774; Ncor=0.697; logoDP=0.705; NsEucl=0.888; NSW=0.887; rcor=649; rNcor=111; rlogoDP=903; rNsEucl=808; rNSW=786; rank_mean=651.400; match_rank= a 0 0 0 0 0 0 0 0 0 874 706 1000 1000 1000 0 33 385 577 c 0 0 0 0 0 0 0 0 0 38 0 0 0 0 0 76 58 58 g 0 0 0 0 0 0 0 0 0 40 0 0 0 0 1000 183 123 242 t 0 0 0 0 0 0 0 0 0 46 293 0 0 0 0 706 432 121

DOF2.5_MA0977.1_JASPAR_shift9 (DOF2.5:MA0977.1:JASPAR) 0.743 0.594 6.849 0.870 0.866 801 368 163 972 964 653.600
; assembly_12 versus DOF2.5_MA0977.1_JASPAR (DOF2.5:MA0977.1:JASPAR); m=80/115; ncol2=8; w=0; offset=1; strand=D; shift=9; score= 653.6; ---------AwAARGTg- ; cor=0.743; Ncor=0.594; logoDP=6.849; NsEucl=0.870; NSW=0.866; rcor=801; rNcor=368; rlogoDP=163; rNsEucl=972; rNSW=964; rank_mean=653.600; match_rank= a 0 0 0 0 0 0 0 0 0 756 598 990 986 744 4 8 238 0 c 0 0 0 0 0 0 0 0 0 26 1 1 1 1 1 198 44 0 g 0 0 0 0 0 0 0 0 0 182 12 4 8 254 977 65 557 0 t 0 0 0 0 0 0 0 0 0 36 389 5 6 1 18 729 160 0

dof24.DAP_M0252_AthalianaCistrome_rc_shift8 (dof24.DAP:M0252:AthalianaCistrome_rc) 0.789 0.526 0.528 0.902 0.904 562 612 940 559 601 654.800
; assembly_12 versus dof24.DAP_M0252_AthalianaCistrome_rc (dof24.DAP:M0252:AthalianaCistrome_rc); m=81/115; ncol2=15; w=0; offset=0; strand=R; shift=8; score= 654.8; --------mAAAAAGtwA ; cor=0.789; Ncor=0.526; logoDP=0.528; NsEucl=0.902; NSW=0.904; rcor=562; rNcor=612; rlogoDP=940; rNsEucl=559; rNSW=601; rank_mean=654.800; match_rank= a 0 0 0 0 0 0 0 0 156 503 460 600 600 594 0 24 262 435 c 0 0 0 0 0 0 0 0 173 26 0 0 0 0 0 82 20 16 g 0 0 0 0 0 0 0 0 148 44 0 0 0 6 600 119 135 131 t 0 0 0 0 0 0 0 0 123 27 140 0 0 0 0 375 183 18

fgenesh1_pg.C_Chr_08.0001000114_M0664_1.02_CISBP_shift8 (fgenesh1_pg.C_Chr_08.0001000114:M0664_1.02:CISBP) 0.819 0.655 1.429 0.871 0.868 405 181 793 966 950 659.000
; assembly_12 versus fgenesh1_pg.C_Chr_08.0001000114_M0664_1.02_CISBP (fgenesh1_pg.C_Chr_08.0001000114:M0664_1.02:CISBP); m=82/115; ncol2=8; w=0; offset=0; strand=D; shift=8; score= 659; --------sawaamGt-- ; cor=0.819; Ncor=0.655; logoDP=1.429; NsEucl=0.871; NSW=0.868; rcor=405; rNcor=181; rlogoDP=793; rNsEucl=966; rNSW=950; rank_mean=659.000; match_rank= a 0 0 0 0 0 0 0 0 24 36 41 62 65 55 13 17 0 0 c 0 0 0 0 0 0 0 0 26 19 15 13 11 29 10 24 0 0 g 0 0 0 0 0 0 0 0 27 23 15 9 7 0 70 21 0 0 t 0 0 0 0 0 0 0 0 23 22 29 16 17 16 7 38 0 0

AT3G45610_MA1270.1_JASPAR_rc_shift0 (AT3G45610:MA1270.1:JASPAR_rc) 0.812 0.427 0.251 0.909 0.916 443 965 1036 415 459 663.600
; assembly_12 versus AT3G45610_MA1270.1_JASPAR_rc (AT3G45610:MA1270.1:JASPAR_rc); m=83/115; ncol2=19; w=-8; offset=-8; strand=R; shift=0; score= 663.6; aaaaaarrsAAAAAGtwr ; cor=0.812; Ncor=0.427; logoDP=0.251; NsEucl=0.909; NSW=0.916; rcor=443; rNcor=965; rlogoDP=1036; rNsEucl=415; rNSW=459; rank_mean=663.600; match_rank= a 274 288 327 328 397 363 267 153 120 496 465 600 599 600 0 58 285 323 c 115 88 55 48 59 56 57 107 176 10 0 0 1 0 0 85 27 51 g 134 92 92 120 55 98 189 211 175 55 0 0 0 0 600 138 111 151 t 77 132 126 104 89 83 87 129 129 39 135 0 0 0 0 319 177 75

ADOF2_M0649_1.02_CISBP_shift8 (ADOF2:M0649_1.02:CISBP) 0.783 0.626 2.568 0.875 0.876 595 262 710 942 887 679.200
; assembly_12 versus ADOF2_M0649_1.02_CISBP (ADOF2:M0649_1.02:CISBP); m=84/115; ncol2=8; w=0; offset=0; strand=D; shift=8; score= 679.2; --------srwAAmGy-- ; cor=0.783; Ncor=0.626; logoDP=2.568; NsEucl=0.875; NSW=0.876; rcor=595; rNcor=262; rlogoDP=710; rNsEucl=942; rNSW=887; rank_mean=679.200; match_rank= a 0 0 0 0 0 0 0 0 24 31 35 81 80 50 11 20 0 0 c 0 0 0 0 0 0 0 0 26 20 14 7 9 40 3 25 0 0 g 0 0 0 0 0 0 0 0 27 25 17 4 2 2 78 21 0 0 t 0 0 0 0 0 0 0 0 23 24 34 8 9 8 8 34 0 0

AT5G02460.ampDAP_M0258_AthalianaCistrome_rc_shift2 (AT5G02460.ampDAP:M0258:AthalianaCistrome_rc) 0.801 0.422 0.369 0.905 0.911 501 1001 970 479 519 694.000
; assembly_12 versus AT5G02460.ampDAP_M0258_AthalianaCistrome_rc (AT5G02460.ampDAP:M0258:AthalianaCistrome_rc); m=85/115; ncol2=19; w=-6; offset=-6; strand=R; shift=2; score= 694; --wwaaaamAWAAAGtwa ; cor=0.801; Ncor=0.422; logoDP=0.369; NsEucl=0.905; NSW=0.911; rcor=501; rNcor=1001; rlogoDP=970; rNsEucl=479; rNSW=519; rank_mean=694.000; match_rank= a 0 0 265 257 277 279 244 239 206 472 432 600 600 598 0 21 288 401 c 0 0 77 66 82 96 72 131 168 41 12 0 0 0 0 98 28 18 g 0 0 80 114 111 100 146 106 126 52 1 0 0 2 600 84 105 123 t 0 0 178 163 130 125 138 124 100 35 155 0 0 0 0 397 179 58

RIN_EEAD0575_EEADannot_shift6 (RIN:EEAD0575:EEADannot) 0.755 0.503 9.645 0.864 0.853 745 705 2 1003 1032 697.400
; assembly_12 versus RIN_EEAD0575_EEADannot (RIN:EEAD0575:EEADannot); m=86/115; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score= 697.4; ------mmyAAAAAGr-- ; cor=0.755; Ncor=0.503; logoDP=9.645; NsEucl=0.864; NSW=0.853; rcor=745; rNcor=705; rlogoDP=2; rNsEucl=1003; rNSW=1032; rank_mean=697.400; match_rank= a 0 0 0 0 0 0 1 1 0 2 2 2 2 2 0 1 0 0 c 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 t 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0

DOF3.5_MA1276.2_JASPAR_shift9 (DOF3.5:MA1276.2:JASPAR) 0.753 0.527 8.278 0.853 0.850 761 607 36 1050 1039 698.600
; assembly_12 versus DOF3.5_MA1276.2_JASPAR (DOF3.5:MA1276.2:JASPAR); m=87/115; ncol2=7; w=0; offset=1; strand=D; shift=9; score= 698.6; ---------AwAAAGk-- ; cor=0.753; Ncor=0.527; logoDP=8.278; NsEucl=0.853; NSW=0.850; rcor=761; rNcor=607; rlogoDP=36; rNsEucl=1050; rNSW=1039; rank_mean=698.600; match_rank= a 0 0 0 0 0 0 0 0 0 467 348 599 599 599 0 2 0 0 c 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 6 0 0 g 0 0 0 0 0 0 0 0 0 103 0 0 0 0 599 219 0 0 t 0 0 0 0 0 0 0 0 0 25 251 0 0 0 0 372 0 0

TATA-box-binding_6ueq_B_3D-footprint_rc_shift7 (TATA-box-binding:6ueq_B:3D-footprint_rc) 0.814 0.518 2.028 0.875 0.891 427 652 743 943 746 702.200
; assembly_12 versus TATA-box-binding_6ueq_B_3D-footprint_rc (TATA-box-binding:6ueq_B:3D-footprint_rc); m=88/115; ncol2=8; w=-1; offset=-1; strand=R; shift=7; score= 702.2; -------tATAAaAG--- ; cor=0.814; Ncor=0.518; logoDP=2.028; NsEucl=0.875; NSW=0.891; rcor=427; rNcor=652; rlogoDP=743; rNsEucl=943; rNSW=746; rank_mean=702.200; match_rank= a 0 0 0 0 0 0 0 10 96 0 96 85 64 96 1 0 0 0 c 0 0 0 0 0 0 0 12 0 0 0 10 10 0 10 0 0 0 g 0 0 0 0 0 0 0 10 0 0 0 0 10 0 85 0 0 0 t 0 0 0 0 0 0 0 64 0 96 0 1 12 0 0 0 0 0

TATA-box-binding_6ueo_G_3D-footprint_shift7 (TATA-box-binding:6ueo_G:3D-footprint) 0.777 0.495 5.175 0.868 0.879 630 732 350 976 849 707.400
; assembly_12 versus TATA-box-binding_6ueo_G_3D-footprint (TATA-box-binding:6ueo_G:3D-footprint); m=89/115; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score= 707.4; -------TATAAAAG--- ; cor=0.777; Ncor=0.495; logoDP=5.175; NsEucl=0.868; NSW=0.879; rcor=630; rNcor=732; rlogoDP=350; rNsEucl=976; rNSW=849; rank_mean=707.400; match_rank= a 0 0 0 0 0 0 0 0 96 0 96 96 67 67 11 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 11 9 9 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 9 11 67 0 0 0 t 0 0 0 0 0 0 0 96 0 96 0 0 9 9 9 0 0 0

TRANSCRIPTION_1qna_B_3D-footprint_rc_shift7 (TRANSCRIPTION:1qna_B:3D-footprint_rc) 0.798 0.508 3.313 0.873 0.887 510 696 603 953 783 709.000
; assembly_12 versus TRANSCRIPTION_1qna_B_3D-footprint_rc (TRANSCRIPTION:1qna_B:3D-footprint_rc); m=90/115; ncol2=8; w=-1; offset=-1; strand=R; shift=7; score= 709; -------TTTAAaAg--- ; cor=0.798; Ncor=0.508; logoDP=3.313; NsEucl=0.873; NSW=0.887; rcor=510; rNcor=696; rlogoDP=603; rNsEucl=953; rNSW=783; rank_mean=709.000; match_rank= a 0 0 0 0 0 0 0 1 0 10 96 96 64 96 12 0 0 0 c 0 0 0 0 0 0 0 10 0 1 0 0 10 0 10 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 12 0 64 0 0 0 t 0 0 0 0 0 0 0 85 96 85 0 0 10 0 10 0 0 0

TATA_1vto_B_3D-footprint_shift7 (TATA:1vto_B:3D-footprint) 0.770 0.490 6.202 0.864 0.871 666 751 218 1004 927 713.200
; assembly_12 versus TATA_1vto_B_3D-footprint (TATA:1vto_B:3D-footprint); m=91/115; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score= 713.2; -------TATAAaAg--- ; cor=0.770; Ncor=0.490; logoDP=6.202; NsEucl=0.864; NSW=0.871; rcor=666; rNcor=751; rlogoDP=218; rNsEucl=1004; rNSW=927; rank_mean=713.200; match_rank= a 0 0 0 0 0 0 0 0 96 0 96 96 54 96 13 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 16 0 13 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 13 0 57 0 0 0 t 0 0 0 0 0 0 0 96 0 96 0 0 13 0 13 0 0 0

TAGL1_UN0426.2_JASPAR_shift7 (TAGL1:UN0426.2:JASPAR) 0.737 0.536 7.239 0.864 0.852 833 581 119 1006 1033 714.400
; assembly_12 versus TAGL1_UN0426.2_JASPAR (TAGL1:UN0426.2:JASPAR); m=92/115; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score= 714.4; -------agAAAAAGG-- ; cor=0.737; Ncor=0.536; logoDP=7.239; NsEucl=0.864; NSW=0.852; rcor=833; rNcor=581; rlogoDP=119; rNsEucl=1006; rNSW=1033; rank_mean=714.400; match_rank= a 0 0 0 0 0 0 0 2930 1091 4576 4641 4647 4590 4562 320 461 0 0 c 0 0 0 0 0 0 0 676 351 61 47 23 14 37 46 83 0 0 g 0 0 0 0 0 0 0 401 2722 106 85 83 109 85 4328 4129 0 0 t 0 0 0 0 0 0 0 844 687 108 78 98 138 167 157 178 0 0

TATA_1vtl_E_3D-footprint_shift7 (TATA:1vtl_E:3D-footprint) 0.769 0.489 6.390 0.863 0.869 675 759 204 1011 939 717.600
; assembly_12 versus TATA_1vtl_E_3D-footprint (TATA:1vtl_E:3D-footprint); m=93/115; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score= 717.6; -------TATAAaAg--- ; cor=0.769; Ncor=0.489; logoDP=6.390; NsEucl=0.863; NSW=0.869; rcor=675; rNcor=759; rlogoDP=204; rNsEucl=1011; rNSW=939; rank_mean=717.600; match_rank= a 0 0 0 0 0 0 0 0 96 0 96 96 48 96 16 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 16 0 16 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 16 0 64 0 0 0 t 0 0 0 0 0 0 0 96 0 96 0 0 16 0 0 0 0 0

DOF1_PBF1_B73_2_m1_EEAD0325_EEADannot_rc_shift3 (DOF1_PBF1_B73_2_m1:EEAD0325:EEADannot_rc) 0.765 0.510 0.383 0.899 0.898 698 683 964 615 665 725.000
; assembly_12 versus DOF1_PBF1_B73_2_m1_EEAD0325_EEADannot_rc (DOF1_PBF1_B73_2_m1:EEAD0325:EEADannot_rc); m=94/115; ncol2=15; w=-5; offset=-5; strand=R; shift=3; score= 725; ---wacrsyrAAAAGTmA ; cor=0.765; Ncor=0.510; logoDP=0.383; NsEucl=0.899; NSW=0.898; rcor=698; rNcor=683; rlogoDP=964; rNsEucl=615; rNSW=665; rank_mean=725.000; match_rank= a 0 0 0 52 61 16 34 12 7 47 89 97 78 95 0 2 36 70 c 0 0 0 5 14 52 5 28 39 20 2 1 0 0 1 9 37 3 g 0 0 0 8 11 8 49 56 8 29 2 1 0 4 99 19 12 23 t 0 0 0 35 14 24 12 4 46 4 7 1 22 1 0 70 15 4

Zm00001d027846_MA1823.2_JASPAR_shift6 (Zm00001d027846:MA1823.2:JASPAR) 0.801 0.400 4.583 0.867 0.894 502 1084 443 982 707 743.600
; assembly_12 versus Zm00001d027846_MA1823.2_JASPAR (Zm00001d027846:MA1823.2:JASPAR); m=95/115; ncol2=8; w=-2; offset=-2; strand=D; shift=6; score= 743.6; ------AAAGAAAA---- ; cor=0.801; Ncor=0.400; logoDP=4.583; NsEucl=0.867; NSW=0.894; rcor=502; rNcor=1084; rlogoDP=443; rNsEucl=982; rNSW=707; rank_mean=743.600; match_rank= a 0 0 0 0 0 0 818 893 929 23 896 915 914 752 0 0 0 0 c 0 0 0 0 0 0 46 17 6 24 29 11 27 53 0 0 0 0 g 0 0 0 0 0 0 86 44 30 866 38 28 33 123 0 0 0 0 t 0 0 0 0 0 0 37 33 22 74 24 33 13 59 0 0 0 0

At2g41835.DAP_M0332_AthalianaCistrome_shift7 (At2g41835.DAP:M0332:AthalianaCistrome) 0.782 0.427 7.294 0.846 0.857 602 971 110 1076 1014 754.600
; assembly_12 versus At2g41835.DAP_M0332_AthalianaCistrome (At2g41835.DAP:M0332:AthalianaCistrome); m=96/115; ncol2=7; w=-1; offset=-1; strand=D; shift=7; score= 754.6; -------TTGAAAA---- ; cor=0.782; Ncor=0.427; logoDP=7.294; NsEucl=0.846; NSW=0.857; rcor=602; rNcor=971; rlogoDP=110; rNsEucl=1076; rNSW=1014; rank_mean=754.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 192 180 192 192 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 192 0 12 0 0 0 0 0 0 t 0 0 0 0 0 0 0 192 192 0 0 0 0 0 0 0 0 0

ONAC127_UN0430.1_JASPAR_shift5 (ONAC127:UN0430.1:JASPAR) 0.723 0.501 5.493 0.879 0.867 916 711 297 903 955 756.400
; assembly_12 versus ONAC127_UN0430.1_JASPAR (ONAC127:UN0430.1:JASPAR); m=97/115; ncol2=12; w=-3; offset=-3; strand=D; shift=5; score= 756.4; -----dgAAGAAAAGgr- ; cor=0.723; Ncor=0.501; logoDP=5.493; NsEucl=0.879; NSW=0.867; rcor=916; rNcor=711; rlogoDP=297; rNsEucl=903; rNSW=955; rank_mean=756.400; match_rank= a 0 0 0 0 0 20 16 65 67 4 57 61 63 58 3 16 25 0 c 0 0 0 0 0 8 16 0 0 0 2 5 0 1 7 14 9 0 g 0 0 0 0 0 20 22 0 0 62 7 1 5 3 56 30 19 0 t 0 0 0 0 0 20 14 3 1 2 2 1 0 6 2 8 15 0

HvNAC013_1_EEAD0563_EEADannot_shift9 (HvNAC013_1:EEAD0563:EEADannot) 0.701 0.526 7.806 0.868 0.843 1085 614 58 979 1055 758.200
; assembly_12 versus HvNAC013_1_EEAD0563_EEADannot (HvNAC013_1:EEAD0563:EEADannot); m=98/115; ncol2=11; w=0; offset=1; strand=D; shift=9; score= 758.2; ----------rmAAGCAA ; cor=0.701; Ncor=0.526; logoDP=7.806; NsEucl=0.868; NSW=0.843; rcor=1085; rNcor=614; rlogoDP=58; rNsEucl=979; rNSW=1055; rank_mean=758.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 2121 1747 6767 6767 0 0 6767 6767 c 0 0 0 0 0 0 0 0 0 0 1208 2484 0 0 0 6767 0 0 g 0 0 0 0 0 0 0 0 0 0 2059 1549 0 0 6767 0 0 0 t 0 0 0 0 0 0 0 0 0 0 1379 987 0 0 0 0 0 0

NAC007_MA2044.2_JASPAR_shift11 (NAC007:MA2044.2:JASPAR) 0.736 0.515 6.287 0.855 0.852 848 663 211 1047 1034 760.600
; assembly_12 versus NAC007_MA2044.2_JASPAR (NAC007:MA2044.2:JASPAR); m=99/115; ncol2=7; w=0; offset=3; strand=D; shift=11; score= 760.6; -----------cAAGCAA ; cor=0.736; Ncor=0.515; logoDP=6.287; NsEucl=0.855; NSW=0.852; rcor=848; rNcor=663; rlogoDP=211; rNsEucl=1047; rNSW=1034; rank_mean=760.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 285 2117 1962 4 3 1974 2067 c 0 0 0 0 0 0 0 0 0 0 0 1236 13 161 7 2037 60 15 g 0 0 0 0 0 0 0 0 0 0 0 361 19 11 2144 9 40 13 t 0 0 0 0 0 0 0 0 0 0 0 291 24 39 18 124 99 78

NAC076_MA2036.2_JASPAR_shift11 (NAC076:MA2036.2:JASPAR) 0.734 0.514 6.271 0.854 0.851 863 669 215 1048 1036 766.200
; assembly_12 versus NAC076_MA2036.2_JASPAR (NAC076:MA2036.2:JASPAR); m=100/115; ncol2=7; w=0; offset=3; strand=D; shift=11; score= 766.2; -----------cAAGCAA ; cor=0.734; Ncor=0.514; logoDP=6.271; NsEucl=0.854; NSW=0.851; rcor=863; rNcor=669; rlogoDP=215; rNsEucl=1048; rNSW=1036; rank_mean=766.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 408 3171 2963 7 16 2965 3088 c 0 0 0 0 0 0 0 0 0 0 0 1879 22 216 18 3023 81 19 g 0 0 0 0 0 0 0 0 0 0 0 539 20 16 3193 23 55 17 t 0 0 0 0 0 0 0 0 0 0 0 421 34 52 29 185 146 123

SMB_MA2010.2_JASPAR_shift11 (SMB:MA2010.2:JASPAR) 0.730 0.511 6.062 0.854 0.850 883 678 227 1049 1038 775.000
; assembly_12 versus SMB_MA2010.2_JASPAR (SMB:MA2010.2:JASPAR); m=101/115; ncol2=7; w=0; offset=3; strand=D; shift=11; score= 775; -----------cAAGCAA ; cor=0.730; Ncor=0.511; logoDP=6.062; NsEucl=0.854; NSW=0.850; rcor=883; rNcor=678; rlogoDP=227; rNsEucl=1049; rNSW=1038; rank_mean=775.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 418 3480 3246 6 8 3245 3387 c 0 0 0 0 0 0 0 0 0 0 0 2165 45 251 21 3329 115 33 g 0 0 0 0 0 0 0 0 0 0 0 553 35 25 3530 33 64 29 t 0 0 0 0 0 0 0 0 0 0 0 466 42 80 45 232 178 153

COG1.ampDAP_M0276_AthalianaCistrome_rc_shift8 (COG1.ampDAP:M0276:AthalianaCistrome_rc) 0.752 0.501 0.560 0.894 0.887 766 709 932 717 787 782.200
; assembly_12 versus COG1.ampDAP_M0276_AthalianaCistrome_rc (COG1.ampDAP:M0276:AthalianaCistrome_rc); m=102/115; ncol2=15; w=0; offset=0; strand=R; shift=8; score= 782.2; --------vAAAAAGTrm ; cor=0.752; Ncor=0.501; logoDP=0.560; NsEucl=0.894; NSW=0.887; rcor=766; rNcor=709; rlogoDP=932; rNsEucl=717; rNSW=787; rank_mean=782.200; match_rank= a 0 0 0 0 0 0 0 0 171 496 454 595 595 595 0 25 190 301 c 0 0 0 0 0 0 0 0 155 21 0 0 0 0 0 46 1 163 g 0 0 0 0 0 0 0 0 156 35 0 0 0 0 595 82 347 13 t 0 0 0 0 0 0 0 0 113 43 141 0 0 0 0 442 57 118

DOF4.7_M0652_1.02_CISBP_shift7 (DOF4.7:M0652_1.02:CISBP) 0.763 0.555 2.051 0.870 0.865 708 521 742 974 970 783.000
; assembly_12 versus DOF4.7_M0652_1.02_CISBP (DOF4.7:M0652_1.02:CISBP); m=103/115; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score= 783; -------hrawAAmGt-- ; cor=0.763; Ncor=0.555; logoDP=2.051; NsEucl=0.870; NSW=0.865; rcor=708; rNcor=521; rlogoDP=742; rNsEucl=974; rNSW=970; rank_mean=783.000; match_rank= a 0 0 0 0 0 0 0 26 25 37 37 79 74 46 14 19 0 0 c 0 0 0 0 0 0 0 25 23 17 12 6 10 39 4 23 0 0 g 0 0 0 0 0 0 0 24 29 22 13 3 4 6 71 18 0 0 t 0 0 0 0 0 0 0 25 23 24 38 12 12 9 11 40 0 0

NFYB4.DAP_M0353_AthalianaCistrome_shift8 (NFYB4.DAP:M0353:AthalianaCistrome) 0.707 0.495 7.723 0.842 0.824 1046 730 68 1079 1078 800.200
; assembly_12 versus NFYB4.DAP_M0353_AthalianaCistrome (NFYB4.DAP:M0353:AthalianaCistrome); m=104/115; ncol2=7; w=0; offset=0; strand=D; shift=8; score= 800.2; --------TGAAAAs--- ; cor=0.707; Ncor=0.495; logoDP=7.723; NsEucl=0.842; NSW=0.824; rcor=1046; rNcor=730; rlogoDP=68; rNsEucl=1079; rNSW=1078; rank_mean=800.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 95 95 95 95 22 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 g 0 0 0 0 0 0 0 0 0 95 0 0 0 0 24 0 0 0 t 0 0 0 0 0 0 0 0 95 0 0 0 0 0 19 0 0 0

TRANSCRIPTION_1qne_B_3D-footprint_rc_shift7 (TRANSCRIPTION:1qne_B:3D-footprint_rc) 0.770 0.490 1.945 0.864 0.871 666 751 751 1004 927 819.800
; assembly_12 versus TRANSCRIPTION_1qne_B_3D-footprint_rc (TRANSCRIPTION:1qne_B:3D-footprint_rc); m=105/115; ncol2=8; w=-1; offset=-1; strand=R; shift=7; score= 819.8; -------TATAAaAg--- ; cor=0.770; Ncor=0.490; logoDP=1.945; NsEucl=0.864; NSW=0.871; rcor=666; rNcor=751; rlogoDP=751; rNsEucl=1004; rNSW=927; rank_mean=819.800; match_rank= a 0 0 0 0 0 0 0 0 96 0 96 96 54 96 13 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 13 0 13 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 13 0 57 0 0 0 t 0 0 0 0 0 0 0 96 0 96 0 0 16 0 13 0 0 0

AT5G47660_MA1365.3_JASPAR_shift7 (AT5G47660:MA1365.3:JASPAR) 0.757 0.413 5.829 0.844 0.853 729 1024 250 1078 1031 822.400
; assembly_12 versus AT5G47660_MA1365.3_JASPAR (AT5G47660:MA1365.3:JASPAR); m=106/115; ncol2=7; w=-1; offset=-1; strand=D; shift=7; score= 822.4; -------GGTAAAA---- ; cor=0.757; Ncor=0.413; logoDP=5.829; NsEucl=0.844; NSW=0.853; rcor=729; rNcor=1024; rlogoDP=250; rNsEucl=1078; rNSW=1031; rank_mean=822.400; match_rank= a 0 0 0 0 0 0 0 549 0 0 5302 5236 4920 4790 0 0 0 0 c 0 0 0 0 0 0 0 76 0 14 30 8 23 1 0 0 0 0 g 0 0 0 0 0 0 0 4639 5429 0 38 50 104 34 0 0 0 0 t 0 0 0 0 0 0 0 165 0 5415 59 135 382 604 0 0 0 0

NAC101_MA2050.2_JASPAR_shift11 (NAC101:MA2050.2:JASPAR) 0.709 0.496 5.860 0.847 0.836 1034 725 245 1067 1064 827.000
; assembly_12 versus NAC101_MA2050.2_JASPAR (NAC101:MA2050.2:JASPAR); m=107/115; ncol2=7; w=0; offset=3; strand=D; shift=11; score= 827; -----------CAAGCAA ; cor=0.709; Ncor=0.496; logoDP=5.860; NsEucl=0.847; NSW=0.836; rcor=1034; rNcor=725; rlogoDP=245; rNsEucl=1067; rNSW=1064; rank_mean=827.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 248 2593 2461 32 82 2449 2513 c 0 0 0 0 0 0 0 0 0 0 0 1815 11 145 35 2318 56 14 g 0 0 0 0 0 0 0 0 0 0 0 253 17 7 2538 57 42 14 t 0 0 0 0 0 0 0 0 0 0 0 333 28 36 44 192 102 108

PROTEIN_1vol_AB_3D-footprint_rc_shift7 (PROTEIN:1vol_AB:3D-footprint_rc) 0.769 0.489 1.944 0.863 0.869 675 759 752 1011 939 827.200
; assembly_12 versus PROTEIN_1vol_AB_3D-footprint_rc (PROTEIN:1vol_AB:3D-footprint_rc); m=108/115; ncol2=8; w=-1; offset=-1; strand=R; shift=7; score= 827.2; -------TATAAaAg--- ; cor=0.769; Ncor=0.489; logoDP=1.944; NsEucl=0.863; NSW=0.869; rcor=675; rNcor=759; rlogoDP=752; rNsEucl=1011; rNSW=939; rank_mean=827.200; match_rank= a 0 0 0 0 0 0 0 0 96 0 96 96 48 96 16 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 16 0 16 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 16 0 64 0 0 0 t 0 0 0 0 0 0 0 96 0 96 0 0 16 0 0 0 0 0

SAP11_UN0835.1_JASPAR_rc_shift7 (SAP11:UN0835.1:JASPAR_rc) 0.782 0.427 3.879 0.846 0.857 602 971 533 1076 1014 839.200
; assembly_12 versus SAP11_UN0835.1_JASPAR_rc (SAP11:UN0835.1:JASPAR_rc); m=109/115; ncol2=7; w=-1; offset=-1; strand=R; shift=7; score= 839.2; -------TTGAAAA---- ; cor=0.782; Ncor=0.427; logoDP=3.879; NsEucl=0.846; NSW=0.857; rcor=602; rNcor=971; rlogoDP=533; rNsEucl=1076; rNSW=1014; rank_mean=839.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 1000 937.5 1000 1000 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 1000 0 62.5 0 0 0 0 0 0 t 0 0 0 0 0 0 0 1000 1000 0 0 0 0 0 0 0 0 0

AT5G25475.DAP_M0007_AthalianaCistrome_shift11 (AT5G25475.DAP:M0007:AthalianaCistrome) 0.706 0.424 7.746 0.818 0.800 1048 985 65 1089 1089 855.200
; assembly_12 versus AT5G25475.DAP_M0007_AthalianaCistrome (AT5G25475.DAP:M0007:AthalianaCistrome); m=110/115; ncol2=6; w=0; offset=3; strand=D; shift=11; score= 855.2; -----------CAAGCA- ; cor=0.706; Ncor=0.424; logoDP=7.746; NsEucl=0.818; NSW=0.800; rcor=1048; rNcor=985; rlogoDP=65; rNsEucl=1089; rNSW=1089; rank_mean=855.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 218 218 0 0 218 0 c 0 0 0 0 0 0 0 0 0 0 0 196 0 0 0 218 0 0 g 0 0 0 0 0 0 0 0 0 0 0 22 0 0 218 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

NAC045_MA2048.2_JASPAR_shift11 (NAC045:MA2048.2:JASPAR) 0.705 0.449 5.838 0.847 0.835 1058 893 249 1070 1067 867.400
; assembly_12 versus NAC045_MA2048.2_JASPAR (NAC045:MA2048.2:JASPAR); m=111/115; ncol2=8; w=0; offset=3; strand=D; shift=11; score= 867.4; -----------sAAGCAA ; cor=0.705; Ncor=0.449; logoDP=5.838; NsEucl=0.847; NSW=0.835; rcor=1058; rNcor=893; rlogoDP=249; rNsEucl=1070; rNSW=1067; rank_mean=867.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 112 1389 1327 23 84 1328 1352 c 0 0 0 0 0 0 0 0 0 0 0 367 4 52 11 1158 17 3 g 0 0 0 0 0 0 0 0 0 0 0 814 5 16 1354 41 11 10 t 0 0 0 0 0 0 0 0 0 0 0 111 6 9 16 121 48 39

NAC105_MA2053.2_JASPAR_shift11 (NAC105:MA2053.2:JASPAR) 0.712 0.415 5.842 0.849 0.839 999 1016 248 1063 1060 877.200
; assembly_12 versus NAC105_MA2053.2_JASPAR (NAC105:MA2053.2:JASPAR); m=112/115; ncol2=9; w=0; offset=3; strand=D; shift=11; score= 877.2; -----------cAAGCAA ; cor=0.712; Ncor=0.415; logoDP=5.842; NsEucl=0.849; NSW=0.839; rcor=999; rNcor=1016; rlogoDP=248; rNsEucl=1063; rNSW=1060; rank_mean=877.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 128 1178 1122 9 73 1136 1172 c 0 0 0 0 0 0 0 0 0 0 0 680 10 69 12 990 20 4 g 0 0 0 0 0 0 0 0 0 0 0 214 5 3 1176 37 14 2 t 0 0 0 0 0 0 0 0 0 0 0 179 8 7 4 101 31 23

TRANSCRIPTION_1qnc_B_3D-footprint_rc_shift7 (TRANSCRIPTION:1qnc_B:3D-footprint_rc) 0.738 0.470 1.944 0.856 0.854 825 826 753 1042 1027 894.600
; assembly_12 versus TRANSCRIPTION_1qnc_B_3D-footprint_rc (TRANSCRIPTION:1qnc_B:3D-footprint_rc); m=113/115; ncol2=8; w=-1; offset=-1; strand=R; shift=7; score= 894.6; -------AATAAmAs--- ; cor=0.738; Ncor=0.470; logoDP=1.944; NsEucl=0.856; NSW=0.854; rcor=825; rNcor=826; rlogoDP=753; rNsEucl=1042; rNSW=1027; rank_mean=894.600; match_rank= a 0 0 0 0 0 0 0 96 96 0 96 96 43 96 13 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 27 0 27 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 13 0 54 0 0 0 t 0 0 0 0 0 0 0 0 0 96 0 0 13 0 2 0 0 0

ATGRP2B_M0583_1.02_CISBP_rc_shift7 (ATGRP2B:M0583_1.02:CISBP_rc) 0.714 0.454 0.737 0.846 0.835 984 872 901 1072 1069 979.600
; assembly_12 versus ATGRP2B_M0583_1.02_CISBP_rc (ATGRP2B:M0583_1.02:CISBP_rc); m=114/115; ncol2=8; w=-1; offset=-1; strand=R; shift=7; score= 979.6; -------AAwAAAAm--- ; cor=0.714; Ncor=0.454; logoDP=0.737; NsEucl=0.846; NSW=0.835; rcor=984; rNcor=872; rlogoDP=901; rNsEucl=1072; rNSW=1069; rank_mean=979.600; match_rank= a 0 0 0 0 0 0 0 99 99 34 99 99 100 99 66 0 0 0 c 0 0 0 0 0 0 0 1 1 0 1 1 0 1 33 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 66 0 0 0 0 1 0 0 0

AT5G25475_UN0848.1_JASPAR_rc_shift11 (AT5G25475:UN0848.1:JASPAR_rc) 0.706 0.424 0.012 0.818 0.800 1047 984 1088 1088 1088 1059.000
; assembly_12 versus AT5G25475_UN0848.1_JASPAR_rc (AT5G25475:UN0848.1:JASPAR_rc); m=115/115; ncol2=6; w=0; offset=3; strand=R; shift=11; score= 1059; -----------CAAGCA- ; cor=0.706; Ncor=0.424; logoDP=0.012; NsEucl=0.818; NSW=0.800; rcor=1047; rNcor=984; rlogoDP=1088; rNsEucl=1088; rNSW=1088; rank_mean=1059.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 1000 1000 0 0 1000 0 c 0 0 0 0 0 0 0 0 0 0 0 899 0 0 0 1000 0 0 g 0 0 0 0 0 0 0 0 0 0 0 101 0 0 1000 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	match_rank	Aligned matrices
assembly_12_shift8 (assembly_12)													; assembly_12; m=0 (reference); ncol1=10; shift=8; ncol=18; --------waAAAAGCww ; Alignment reference a 0 0 0 0 0 0 0 0 280 283 751 751 751 751 0 0 272 262 c 0 0 0 0 0 0 0 0 130 178 0 0 0 0 0 751 147 132 g 0 0 0 0 0 0 0 0 133 110 0 0 0 0 751 0 67 114 t 0 0 0 0 0 0 0 0 208 180 0 0 0 0 0 0 265 243
Dof2_MA0020.1_JASPAR_shift11 (Dof2:MA0020.1:JASPAR)	0.978	0.587	8.049	0.951	0.985	24	402	43	36	26	106.200	23	; assembly_12 versus Dof2_MA0020.1_JASPAR (Dof2:MA0020.1:JASPAR); m=1/115; ncol2=6; w=0; offset=3; strand=D; shift=11; score= 106.2; -----------AAAGcm- ; cor=0.978; Ncor=0.587; logoDP=8.049; NsEucl=0.951; NSW=0.985; rcor=24; rNcor=402; rlogoDP=43; rNsEucl=36; rNSW=26; rank_mean=106.200; match_rank=23 a 0 0 0 0 0 0 0 0 0 0 0 21 21 21 0 3 7 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 6 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 2 3 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0
CDF2_MA0973.1_JASPAR_shift8 (CDF2:MA0973.1:JASPAR)	0.858	0.858	6.812	0.922	0.939	231	7	170	201	199	161.600	42	; assembly_12 versus CDF2_MA0973.1_JASPAR (CDF2:MA0973.1:JASPAR); m=2/115; ncol2=10; w=0; offset=0; strand=D; shift=8; score= 161.6; --------maWAAAGyrh ; cor=0.858; Ncor=0.858; logoDP=6.812; NsEucl=0.922; NSW=0.939; rcor=231; rNcor=7; rlogoDP=170; rNsEucl=201; rNSW=199; rank_mean=161.600; match_rank=42 a 0 0 0 0 0 0 0 0 334 608 693 980 979 868 17 53 328 299 c 0 0 0 0 0 0 0 0 284 92 16 10 10 29 7 295 77 282 g 0 0 0 0 0 0 0 0 235 150 41 4 2 81 969 154 395 155 t 0 0 0 0 0 0 0 0 148 150 250 5 9 22 6 498 200 264
CDF2_M0653_1.02_CISBP_shift8 (CDF2:M0653_1.02:CISBP)	0.857	0.857	6.833	0.922	0.938	234	8	167	203	204	163.200	43	; assembly_12 versus CDF2_M0653_1.02_CISBP (CDF2:M0653_1.02:CISBP); m=3/115; ncol2=10; w=0; offset=0; strand=D; shift=8; score= 163.2; --------maWAAAGyrh ; cor=0.857; Ncor=0.857; logoDP=6.833; NsEucl=0.922; NSW=0.938; rcor=234; rNcor=8; rlogoDP=167; rNsEucl=203; rNSW=204; rank_mean=163.200; match_rank=43 a 0 0 0 0 0 0 0 0 33 61 69 98 98 87 2 6 33 30 c 0 0 0 0 0 0 0 0 28 9 2 1 1 3 0 29 8 28 g 0 0 0 0 0 0 0 0 24 15 4 0 0 8 97 15 39 16 t 0 0 0 0 0 0 0 0 15 15 25 1 1 2 1 50 20 26
Dof2_MA0020.2_JASPAR_shift11 (Dof2:MA0020.2:JASPAR)	0.981	0.491	8.048	0.945	0.985	18	748	45	50	27	177.600	51	; assembly_12 versus Dof2_MA0020.2_JASPAR (Dof2:MA0020.2:JASPAR); m=4/115; ncol2=5; w=0; offset=3; strand=D; shift=11; score= 177.6; -----------AAAGc-- ; cor=0.981; Ncor=0.491; logoDP=8.048; NsEucl=0.945; NSW=0.985; rcor=18; rNcor=748; rlogoDP=45; rNsEucl=50; rNSW=27; rank_mean=177.600; match_rank=51 a 0 0 0 0 0 0 0 0 0 0 0 21 21 21 0 3 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 2 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0
DOF2.2_MA1272.3_JASPAR_shift9 (DOF2.2:MA1272.3:JASPAR)	0.940	0.564	9.533	0.915	0.956	52	486	7	297	100	188.400		; assembly_12 versus DOF2.2_MA1272.3_JASPAR (DOF2.2:MA1272.3:JASPAR); m=5/115; ncol2=6; w=0; offset=1; strand=D; shift=9; score= 188.4; ---------AAAAAG--- ; cor=0.940; Ncor=0.564; logoDP=9.533; NsEucl=0.915; NSW=0.956; rcor=52; rNcor=486; rlogoDP=7; rNsEucl=297; rNSW=100; rank_mean=188.400; match_rank= a 0 0 0 0 0 0 0 0 0 1086 1077 1086 1084 1086 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1086 0 0 0 t 0 0 0 0 0 0 0 0 0 0 9 0 2 0 0 0 0 0
MNB1A_MA0053.1_JASPAR_shift11 (MNB1A:MA0053.1:JASPAR)	0.969	0.484	8.050	0.931	0.976	29	771	41	121	38	200.000		; assembly_12 versus MNB1A_MA0053.1_JASPAR (MNB1A:MA0053.1:JASPAR); m=6/115; ncol2=5; w=0; offset=3; strand=D; shift=11; score= 200; -----------AAAGc-- ; cor=0.969; Ncor=0.484; logoDP=8.050; NsEucl=0.931; NSW=0.976; rcor=29; rNcor=771; rlogoDP=41; rNsEucl=121; rNSW=38; rank_mean=200.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 15 15 15 0 3 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0
PBF_MA0064.1_JASPAR_shift11 (PBF:MA0064.1:JASPAR)	0.960	0.480	7.962	0.923	0.970	34	778	48	185	54	219.800		; assembly_12 versus PBF_MA0064.1_JASPAR (PBF:MA0064.1:JASPAR); m=7/115; ncol2=5; w=0; offset=3; strand=D; shift=11; score= 219.8; -----------AAAGy-- ; cor=0.960; Ncor=0.480; logoDP=7.962; NsEucl=0.923; NSW=0.970; rcor=34; rNcor=778; rlogoDP=48; rNsEucl=185; rNSW=54; rank_mean=219.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 16 16 16 0 1 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 1 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0
CDF3_MA0974.1_JASPAR_shift9 (CDF3:MA0974.1:JASPAR)	0.844	0.760	6.872	0.910	0.926	281	36	161	397	335	242.000		; assembly_12 versus CDF3_MA0974.1_JASPAR (CDF3:MA0974.1:JASPAR); m=8/115; ncol2=9; w=0; offset=1; strand=D; shift=9; score= 242; ---------awAAAGygm ; cor=0.844; Ncor=0.760; logoDP=6.872; NsEucl=0.910; NSW=0.926; rcor=281; rNcor=36; rlogoDP=161; rNsEucl=397; rNSW=335; rank_mean=242.000; match_rank= a 0 0 0 0 0 0 0 0 0 447 607 994 989 880 19 70 222 286 c 0 0 0 0 0 0 0 0 0 143 29 3 5 27 7 291 102 343 g 0 0 0 0 0 0 0 0 0 220 65 1 0 83 969 160 495 169 t 0 0 0 0 0 0 0 0 0 191 298 2 6 10 6 479 180 202
cdf3_M0651_1.02_CISBP_shift9 (cdf3:M0651_1.02:CISBP)	0.843	0.759	6.878	0.909	0.926	286	38	159	399	338	244.000		; assembly_12 versus cdf3_M0651_1.02_CISBP (cdf3:M0651_1.02:CISBP); m=9/115; ncol2=9; w=0; offset=1; strand=D; shift=9; score= 244; ---------awAAAGygm ; cor=0.843; Ncor=0.759; logoDP=6.878; NsEucl=0.909; NSW=0.926; rcor=286; rNcor=38; rlogoDP=159; rNsEucl=399; rNSW=338; rank_mean=244.000; match_rank= a 0 0 0 0 0 0 0 0 0 45 61 99 99 88 1 7 22 29 c 0 0 0 0 0 0 0 0 0 14 3 0 0 3 1 29 10 34 g 0 0 0 0 0 0 0 0 0 22 6 1 0 8 97 16 50 17 t 0 0 0 0 0 0 0 0 0 19 30 0 1 1 1 48 18 20
Dof3_MA0021.1_JASPAR_shift11 (Dof3:MA0021.1:JASPAR)	0.904	0.543	7.950	0.902	0.942	104	563	50	560	173	290.000		; assembly_12 versus Dof3_MA0021.1_JASPAR (Dof3:MA0021.1:JASPAR); m=10/115; ncol2=6; w=0; offset=3; strand=D; shift=11; score= 290; -----------AAAGyv- ; cor=0.904; Ncor=0.543; logoDP=7.950; NsEucl=0.902; NSW=0.942; rcor=104; rNcor=563; rlogoDP=50; rNsEucl=560; rNSW=173; rank_mean=290.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 21 21 21 0 0 6 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 3 9 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0
C3H36_UN0844.1_JASPAR_shift9 (C3H36:UN0844.1:JASPAR)	0.825	0.742	8.413	0.903	0.915	371	51	27	534	472	291.000		; assembly_12 versus C3H36_UN0844.1_JASPAR (C3H36:UN0844.1:JASPAR); m=11/115; ncol2=9; w=0; offset=1; strand=D; shift=9; score= 291; ---------AAAAAGkwr ; cor=0.825; Ncor=0.742; logoDP=8.413; NsEucl=0.903; NSW=0.915; rcor=371; rNcor=51; rlogoDP=27; rNsEucl=534; rNSW=472; rank_mean=291.000; match_rank= a 0 0 0 0 0 0 0 0 0 716 761 1000 1000 985 0 98 273 585 c 0 0 0 0 0 0 0 0 0 98 21 0 0 0 0 130 105 15 g 0 0 0 0 0 0 0 0 0 118 0 0 0 15 1000 346 171 298 t 0 0 0 0 0 0 0 0 0 66 216 0 0 0 0 425 450 101
KHZ1_UN0404.2_JASPAR_shift9 (KHZ1:UN0404.2:JASPAR)	0.825	0.742	8.407	0.903	0.915	372	52	31	533	471	291.800		; assembly_12 versus KHZ1_UN0404.2_JASPAR (KHZ1:UN0404.2:JASPAR); m=12/115; ncol2=9; w=0; offset=1; strand=D; shift=9; score= 291.8; ---------AAAAAGkwr ; cor=0.825; Ncor=0.742; logoDP=8.407; NsEucl=0.903; NSW=0.915; rcor=372; rNcor=52; rlogoDP=31; rNsEucl=533; rNSW=471; rank_mean=291.800; match_rank= a 0 0 0 0 0 0 0 0 0 717 762 1000 1000 985 0 98 273 585 c 0 0 0 0 0 0 0 0 0 98 22 0 0 0 0 130 105 15 g 0 0 0 0 0 0 0 0 0 118 0 0 0 15 1000 347 172 298 t 0 0 0 0 0 0 0 0 0 67 217 0 0 0 0 425 450 102
DOF4.3_MA1747.2_JASPAR_rc_shift10 (DOF4.3:MA1747.2:JASPAR_rc)	0.892	0.476	7.878	0.914	0.941	131	800	55	303	179	293.600		; assembly_12 versus DOF4.3_MA1747.2_JASPAR_rc (DOF4.3:MA1747.2:JASPAR_rc); m=13/115; ncol2=13; w=0; offset=2; strand=R; shift=10; score= 293.6; ----------wAAAGcyw ; cor=0.892; Ncor=0.476; logoDP=7.878; NsEucl=0.914; NSW=0.941; rcor=131; rNcor=800; rlogoDP=55; rNsEucl=303; rNSW=179; rank_mean=293.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 424 998 998 995 2 95 76 429 c 0 0 0 0 0 0 0 0 0 0 103 0 0 0 0 571 345 91 g 0 0 0 0 0 0 0 0 0 0 66 2 0 5 995 147 2 178 t 0 0 0 0 0 0 0 0 0 0 407 0 2 0 3 188 578 302
DOF1.7_MA1277.2_JASPAR_shift9 (DOF1.7:MA1277.2:JASPAR)	0.835	0.626	8.399	0.906	0.920	323	261	32	472	421	301.800		; assembly_12 versus DOF1.7_MA1277.2_JASPAR (DOF1.7:MA1277.2:JASPAR); m=14/115; ncol2=11; w=0; offset=1; strand=D; shift=9; score= 301.8; ---------aAAAAGtar ; cor=0.835; Ncor=0.626; logoDP=8.399; NsEucl=0.906; NSW=0.920; rcor=323; rNcor=261; rlogoDP=32; rNsEucl=472; rNSW=421; rank_mean=301.800; match_rank= a 0 0 0 0 0 0 0 0 0 388 466 595 595 575 0 96 371 342 c 0 0 0 0 0 0 0 0 0 48 0 0 0 0 0 113 18 26 g 0 0 0 0 0 0 0 0 0 108 3 0 0 20 595 94 90 177 t 0 0 0 0 0 0 0 0 0 51 126 0 0 0 0 292 116 50
dof4.5_MA1269.1_JASPAR_shift8 (dof4.5:MA1269.1:JASPAR)	0.818	0.584	8.174	0.912	0.922	409	413	39	352	396	321.800		; assembly_12 versus dof4.5_MA1269.1_JASPAR (dof4.5:MA1269.1:JASPAR); m=15/115; ncol2=14; w=0; offset=0; strand=D; shift=8; score= 321.8; --------rawAAAGtwr ; cor=0.818; Ncor=0.584; logoDP=8.174; NsEucl=0.912; NSW=0.922; rcor=409; rNcor=413; rlogoDP=39; rNsEucl=352; rNSW=396; rank_mean=321.800; match_rank= a 0 0 0 0 0 0 0 0 182 402 349 600 600 600 0 104 282 235 c 0 0 0 0 0 0 0 0 108 72 7 0 0 0 0 125 15 54 g 0 0 0 0 0 0 0 0 194 47 27 0 0 0 600 57 135 233 t 0 0 0 0 0 0 0 0 116 79 217 0 0 0 0 314 168 78
CDF2_MA0973.2_JASPAR_shift9 (CDF2:MA0973.2:JASPAR)	0.878	0.615	6.807	0.897	0.926	160	289	171	653	347	324.000		; assembly_12 versus CDF2_MA0973.2_JASPAR (CDF2:MA0973.2:JASPAR); m=16/115; ncol2=7; w=0; offset=1; strand=D; shift=9; score= 324; ---------aWAAAGy-- ; cor=0.878; Ncor=0.615; logoDP=6.807; NsEucl=0.897; NSW=0.926; rcor=160; rNcor=289; rlogoDP=171; rNsEucl=653; rNSW=347; rank_mean=324.000; match_rank= a 0 0 0 0 0 0 0 0 0 608 693 980 979 868 17 53 0 0 c 0 0 0 0 0 0 0 0 0 92 16 10 10 29 7 295 0 0 g 0 0 0 0 0 0 0 0 0 150 41 4 2 81 969 154 0 0 t 0 0 0 0 0 0 0 0 0 150 250 5 9 22 6 498 0 0
DOF2.2_MA1272.2_JASPAR_shift7 (DOF2.2:MA1272.2:JASPAR)	0.825	0.675	9.554	0.900	0.911	367	142	6	588	517	324.000		; assembly_12 versus DOF2.2_MA1272.2_JASPAR (DOF2.2:MA1272.2:JASPAR); m=17/115; ncol2=10; w=-1; offset=-1; strand=D; shift=7; score= 324; -------wyAAAAAGtw- ; cor=0.825; Ncor=0.675; logoDP=9.554; NsEucl=0.900; NSW=0.911; rcor=367; rNcor=142; rlogoDP=6; rNsEucl=588; rNSW=517; rank_mean=324.000; match_rank= a 0 0 0 0 0 0 0 357 203 1086 1077 1086 1084 1086 0 263 460 0 c 0 0 0 0 0 0 0 142 278 0 0 0 0 0 0 154 112 0 g 0 0 0 0 0 0 0 190 255 0 0 0 0 0 1086 208 195 0 t 0 0 0 0 0 0 0 397 350 0 9 0 2 0 0 461 319 0
e_gw1.170.52.1_M0659_1.02_CISBP_shift8 (e_gw1.170.52.1:M0659_1.02:CISBP)	0.834	0.834	3.909	0.911	0.922	329	13	526	354	400	324.400		; assembly_12 versus e_gw1.170.52.1_M0659_1.02_CISBP (e_gw1.170.52.1:M0659_1.02:CISBP); m=18/115; ncol2=10; w=0; offset=0; strand=D; shift=8; score= 324.4; --------srwAAAGydr ; cor=0.834; Ncor=0.834; logoDP=3.909; NsEucl=0.911; NSW=0.922; rcor=329; rNcor=13; rlogoDP=526; rNsEucl=354; rNSW=400; rank_mean=324.400; match_rank= a 0 0 0 0 0 0 0 0 24 30 40 89 89 72 7 18 27 28 c 0 0 0 0 0 0 0 0 27 22 11 4 5 20 2 26 19 22 g 0 0 0 0 0 0 0 0 25 26 17 1 0 3 84 23 27 27 t 0 0 0 0 0 0 0 0 24 22 32 6 6 5 7 33 27 23
PHYPADRAFT_153324_MA0989.1_JASPAR_shift8 (PHYPADRAFT_153324:MA0989.1:JASPAR)	0.852	0.767	4.176	0.907	0.922	251	34	489	458	401	326.600		; assembly_12 versus PHYPADRAFT_153324_MA0989.1_JASPAR (PHYPADRAFT_153324:MA0989.1:JASPAR); m=19/115; ncol2=9; w=0; offset=0; strand=D; shift=8; score= 326.6; --------vrwAAaGyd- ; cor=0.852; Ncor=0.767; logoDP=4.176; NsEucl=0.907; NSW=0.922; rcor=251; rNcor=34; rlogoDP=489; rNsEucl=458; rNSW=401; rank_mean=326.600; match_rank= a 0 0 0 0 0 0 0 0 253 334 482 861 926 672 71 139 285 0 c 0 0 0 0 0 0 0 0 264 193 71 62 36 147 27 288 158 0 g 0 0 0 0 0 0 0 0 261 255 118 13 0 52 898 195 297 0 t 0 0 0 0 0 0 0 0 222 218 330 65 38 129 5 378 260 0
e_gw1.392.16.1_M0660_1.02_CISBP_shift8 (e_gw1.392.16.1:M0660_1.02:CISBP)	0.851	0.766	4.162	0.906	0.921	255	35	495	463	408	331.200		; assembly_12 versus e_gw1.392.16.1_M0660_1.02_CISBP (e_gw1.392.16.1:M0660_1.02:CISBP); m=20/115; ncol2=9; w=0; offset=0; strand=D; shift=8; score= 331.2; --------vrwAAaGyd- ; cor=0.851; Ncor=0.766; logoDP=4.162; NsEucl=0.906; NSW=0.921; rcor=255; rNcor=35; rlogoDP=495; rNsEucl=463; rNSW=408; rank_mean=331.200; match_rank= a 0 0 0 0 0 0 0 0 25 33 48 86 92 67 7 13 28 0 c 0 0 0 0 0 0 0 0 26 19 7 6 4 15 3 29 16 0 g 0 0 0 0 0 0 0 0 27 26 12 2 0 5 90 20 30 0 t 0 0 0 0 0 0 0 0 22 22 33 6 4 13 0 38 26 0
PHYPADRAFT_140773_MA0987.1_JASPAR_shift8 (PHYPADRAFT_140773:MA0987.1:JASPAR)	0.832	0.832	3.880	0.911	0.921	340	14	531	366	413	332.800		; assembly_12 versus PHYPADRAFT_140773_MA0987.1_JASPAR (PHYPADRAFT_140773:MA0987.1:JASPAR); m=21/115; ncol2=10; w=0; offset=0; strand=D; shift=8; score= 332.8; --------srwAAAGydr ; cor=0.832; Ncor=0.832; logoDP=3.880; NsEucl=0.911; NSW=0.921; rcor=340; rNcor=14; rlogoDP=531; rNsEucl=366; rNSW=413; rank_mean=332.800; match_rank= a 0 0 0 0 0 0 0 0 243 302 396 888 892 715 72 182 271 280 c 0 0 0 0 0 0 0 0 266 215 111 43 46 205 22 258 193 218 g 0 0 0 0 0 0 0 0 253 260 173 10 1 28 839 229 271 272 t 0 0 0 0 0 0 0 0 238 222 321 60 61 52 67 331 265 229
PHYPADRAFT_38837_MA1022.1_JASPAR_shift8 (PHYPADRAFT_38837:MA1022.1:JASPAR)	0.840	0.840	3.392	0.911	0.921	302	10	590	362	410	334.800		; assembly_12 versus PHYPADRAFT_38837_MA1022.1_JASPAR (PHYPADRAFT_38837:MA1022.1:JASPAR); m=22/115; ncol2=10; w=0; offset=0; strand=D; shift=8; score= 334.8; --------vrwAAaGydm ; cor=0.840; Ncor=0.840; logoDP=3.392; NsEucl=0.911; NSW=0.921; rcor=302; rNcor=10; rlogoDP=590; rNsEucl=362; rNSW=410; rank_mean=334.800; match_rank= a 0 0 0 0 0 0 0 0 251 343 463 828 855 644 61 150 259 283 c 0 0 0 0 0 0 0 0 264 186 85 68 62 216 27 269 174 262 g 0 0 0 0 0 0 0 0 257 254 129 24 1 54 860 207 307 227 t 0 0 0 0 0 0 0 0 228 217 323 81 82 86 52 374 259 227
gw1.385.26.1_M0663_1.02_CISBP_shift8 (gw1.385.26.1:M0663_1.02:CISBP)	0.840	0.840	3.422	0.911	0.921	304	11	588	364	411	335.600		; assembly_12 versus gw1.385.26.1_M0663_1.02_CISBP (gw1.385.26.1:M0663_1.02:CISBP); m=23/115; ncol2=10; w=0; offset=0; strand=D; shift=8; score= 335.6; --------vrwAAaGydm ; cor=0.840; Ncor=0.840; logoDP=3.422; NsEucl=0.911; NSW=0.921; rcor=304; rNcor=11; rlogoDP=588; rNsEucl=364; rNSW=411; rank_mean=335.600; match_rank= a 0 0 0 0 0 0 0 0 25 34 46 83 86 64 6 15 26 28 c 0 0 0 0 0 0 0 0 26 19 9 7 6 22 3 27 17 26 g 0 0 0 0 0 0 0 0 26 25 13 2 0 5 86 21 31 23 t 0 0 0 0 0 0 0 0 23 22 32 8 8 9 5 37 26 23
CDF5_UN0360.1_JASPAR_shift7 (CDF5:UN0360.1:JASPAR)	0.821	0.672	9.598	0.899	0.909	393	146	4	616	545	340.800		; assembly_12 versus CDF5_UN0360.1_JASPAR (CDF5:UN0360.1:JASPAR); m=24/115; ncol2=10; w=-1; offset=-1; strand=D; shift=7; score= 340.8; -------wtAAAAAGtr- ; cor=0.821; Ncor=0.672; logoDP=9.598; NsEucl=0.899; NSW=0.909; rcor=393; rNcor=146; rlogoDP=4; rNsEucl=616; rNSW=545; rank_mean=340.800; match_rank= a 0 0 0 0 0 0 0 1306 826 3821 3802 3820 3820 3821 0 941 1597 0 c 0 0 0 0 0 0 0 482 900 0 0 0 0 0 0 510 325 0 g 0 0 0 0 0 0 0 645 926 0 0 0 0 0 3821 724 985 0 t 0 0 0 0 0 0 0 1388 1169 0 19 1 1 0 0 1646 914 0
AT3G12130.ampDAP_M0341_AthalianaCistrome_shift5 (AT3G12130.ampDAP:M0341:AthalianaCistrome)	0.814	0.581	8.410	0.910	0.919	430	422	28	393	438	342.200		; assembly_12 versus AT3G12130.ampDAP_M0341_AthalianaCistrome (AT3G12130.ampDAP:M0341:AthalianaCistrome); m=25/115; ncol2=14; w=-3; offset=-3; strand=D; shift=5; score= 342.2; -----aawsAAAAAGkwr ; cor=0.814; Ncor=0.581; logoDP=8.410; NsEucl=0.910; NSW=0.919; rcor=430; rNcor=422; rlogoDP=28; rNsEucl=393; rNSW=438; rank_mean=342.200; match_rank= a 0 0 0 0 0 288 252 223 101 430 457 600 600 591 0 59 164 351 c 0 0 0 0 0 76 104 82 217 59 13 0 0 0 0 78 63 9 g 0 0 0 0 0 133 112 138 184 71 0 0 0 9 600 208 103 179 t 0 0 0 0 0 103 132 157 98 40 130 0 0 0 0 255 270 61
KHZ1_UN0404.1_JASPAR_shift5 (KHZ1:UN0404.1:JASPAR)	0.814	0.581	8.409	0.910	0.918	431	424	30	395	440	344.000		; assembly_12 versus KHZ1_UN0404.1_JASPAR (KHZ1:UN0404.1:JASPAR); m=26/115; ncol2=14; w=-3; offset=-3; strand=D; shift=5; score= 344; -----aawsAAAAAGkwr ; cor=0.814; Ncor=0.581; logoDP=8.409; NsEucl=0.910; NSW=0.918; rcor=431; rNcor=424; rlogoDP=30; rNsEucl=395; rNSW=440; rank_mean=344.000; match_rank= a 0 0 0 0 0 480 420 372 168 717 762 1000 1000 985 0 98.333 273 585 c 0 0 0 0 0 127 173 137 362 98.333 21.667 0 0 0 0 130 105 15 g 0 0 0 0 0 222 187 230 307 118 0 0 0 15 1000 347 172 298 t 0 0 0 0 0 172 220 262 163 66.667 217 0 0 0 0 425 450 102
At1g64620.ampDAP_M0251_AthalianaCistrome_shift8 (At1g64620.ampDAP:M0251:AthalianaCistrome)	0.794	0.722	8.773	0.903	0.906	532	68	13	532	577	344.400		; assembly_12 versus At1g64620.ampDAP_M0251_AthalianaCistrome (At1g64620.ampDAP:M0251:AthalianaCistrome); m=27/115; ncol2=11; w=0; offset=0; strand=D; shift=8; score= 344.4; --------sAAAAAGkwa ; cor=0.794; Ncor=0.722; logoDP=8.773; NsEucl=0.903; NSW=0.906; rcor=532; rNcor=68; rlogoDP=13; rNsEucl=532; rNSW=577; rank_mean=344.400; match_rank= a 0 0 0 0 0 0 0 0 146 560 490 600 600 599 0 33 260 358 c 0 0 0 0 0 0 0 0 163 5 0 0 0 0 0 57 30 22 g 0 0 0 0 0 0 0 0 161 12 0 0 0 1 600 183 94 126 t 0 0 0 0 0 0 0 0 130 23 110 0 0 0 0 327 216 94
TMO6_M0654_1.02_CISBP_shift8 (TMO6:M0654_1.02:CISBP)	0.901	0.631	3.058	0.901	0.932	110	239	634	569	271	364.600		; assembly_12 versus TMO6_M0654_1.02_CISBP (TMO6:M0654_1.02:CISBP); m=28/115; ncol2=7; w=0; offset=0; strand=D; shift=8; score= 364.6; --------vawAAmG--- ; cor=0.901; Ncor=0.631; logoDP=3.058; NsEucl=0.901; NSW=0.932; rcor=110; rNcor=239; rlogoDP=634; rNsEucl=569; rNSW=271; rank_mean=364.600; match_rank= a 0 0 0 0 0 0 0 0 25 33 40 84 85 61 7 0 0 0 c 0 0 0 0 0 0 0 0 25 21 13 6 8 33 5 0 0 0 g 0 0 0 0 0 0 0 0 26 23 14 2 0 1 76 0 0 0 t 0 0 0 0 0 0 0 0 24 23 33 8 7 5 12 0 0 0
DOF5.3_MA1071.1_JASPAR_shift8 (DOF5.3:MA1071.1:JASPAR)	0.901	0.630	3.081	0.901	0.932	113	242	631	571	272	365.800		; assembly_12 versus DOF5.3_MA1071.1_JASPAR (DOF5.3:MA1071.1:JASPAR); m=29/115; ncol2=7; w=0; offset=0; strand=D; shift=8; score= 365.8; --------gawAAmG--- ; cor=0.901; Ncor=0.630; logoDP=3.081; NsEucl=0.901; NSW=0.932; rcor=113; rNcor=242; rlogoDP=631; rNsEucl=571; rNSW=272; rank_mean=365.800; match_rank= a 0 0 0 0 0 0 0 0 247 327 396 842 850 611 66 0 0 0 c 0 0 0 0 0 0 0 0 247 213 128 61 79 329 52 0 0 0 g 0 0 0 0 0 0 0 0 262 228 146 17 0 14 767 0 0 0 t 0 0 0 0 0 0 0 0 244 233 331 81 70 47 116 0 0 0
DOF1.8_MA0981.1_JASPAR_shift8 (DOF1.8:MA0981.1:JASPAR)	0.825	0.825	3.194	0.908	0.915	373	16	622	431	478	384.000		; assembly_12 versus DOF1.8_MA0981.1_JASPAR (DOF1.8:MA0981.1:JASPAR); m=30/115; ncol2=10; w=0; offset=0; strand=D; shift=8; score= 384; --------vawAAaGtdr ; cor=0.825; Ncor=0.825; logoDP=3.194; NsEucl=0.908; NSW=0.915; rcor=373; rNcor=16; rlogoDP=622; rNsEucl=431; rNSW=478; rank_mean=384.000; match_rank= a 0 0 0 0 0 0 0 0 251 321 415 812 831 658 65 170 268 288 c 0 0 0 0 0 0 0 0 259 197 100 72 64 233 23 241 189 209 g 0 0 0 0 0 0 0 0 256 250 135 38 3 27 846 231 270 269 t 0 0 0 0 0 0 0 0 234 233 350 77 102 83 65 359 273 234
AT1G64620_M0647_1.02_CISBP_shift8 (AT1G64620:M0647_1.02:CISBP)	0.823	0.823	3.207	0.907	0.914	381	17	621	438	483	388.000		; assembly_12 versus AT1G64620_M0647_1.02_CISBP (AT1G64620:M0647_1.02:CISBP); m=31/115; ncol2=10; w=0; offset=0; strand=D; shift=8; score= 388; --------vrwAAaGtdr ; cor=0.823; Ncor=0.823; logoDP=3.207; NsEucl=0.907; NSW=0.914; rcor=381; rNcor=17; rlogoDP=621; rNsEucl=438; rNSW=483; rank_mean=388.000; match_rank= a 0 0 0 0 0 0 0 0 25 32 41 81 83 66 7 17 27 29 c 0 0 0 0 0 0 0 0 26 20 10 7 7 23 2 24 19 21 g 0 0 0 0 0 0 0 0 26 25 14 4 0 3 85 23 27 27 t 0 0 0 0 0 0 0 0 23 23 35 8 10 8 6 36 27 23
dof43.DAP_M0281_AthalianaCistrome_shift11 (dof43.DAP:M0281:AthalianaCistrome)	0.875	0.438	7.188	0.903	0.935	168	934	126	526	245	399.800		; assembly_12 versus dof43.DAP_M0281_AthalianaCistrome (dof43.DAP:M0281:AthalianaCistrome); m=32/115; ncol2=11; w=0; offset=3; strand=D; shift=11; score= 399.8; -----------AAAGyya ; cor=0.875; Ncor=0.438; logoDP=7.188; NsEucl=0.903; NSW=0.935; rcor=168; rNcor=934; rlogoDP=126; rNsEucl=526; rNSW=245; rank_mean=399.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 62 62 61 1 11 0 39 c 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 24 21 3 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59 11 0 14 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 41 6
DAG2_MA1271.1_JASPAR_shift8 (DAG2:MA1271.1:JASPAR)	0.777	0.706	8.643	0.900	0.899	636	101	16	603	656	402.400		; assembly_12 versus DAG2_MA1271.1_JASPAR (DAG2:MA1271.1:JASPAR); m=33/115; ncol2=11; w=0; offset=0; strand=D; shift=8; score= 402.4; --------sAAAAAGkdr ; cor=0.777; Ncor=0.706; logoDP=8.643; NsEucl=0.900; NSW=0.899; rcor=636; rNcor=101; rlogoDP=16; rNsEucl=603; rNSW=656; rank_mean=402.400; match_rank= a 0 0 0 0 0 0 0 0 123 492 471 600 600 597 0 13 206 390 c 0 0 0 0 0 0 0 0 188 31 0 0 0 0 0 37 45 10 g 0 0 0 0 0 0 0 0 175 51 0 0 0 3 600 185 152 156 t 0 0 0 0 0 0 0 0 114 26 129 0 0 0 0 365 197 44
DOF4.5_MA1269.2_JASPAR_shift9 (DOF4.5:MA1269.2:JASPAR)	0.821	0.528	8.174	0.903	0.915	392	606	40	541	475	410.800		; assembly_12 versus DOF4.5_MA1269.2_JASPAR (DOF4.5:MA1269.2:JASPAR); m=34/115; ncol2=13; w=0; offset=1; strand=D; shift=9; score= 410.8; ---------awAAAGtwr ; cor=0.821; Ncor=0.528; logoDP=8.174; NsEucl=0.903; NSW=0.915; rcor=392; rNcor=606; rlogoDP=40; rNsEucl=541; rNSW=475; rank_mean=410.800; match_rank= a 0 0 0 0 0 0 0 0 0 402 349 600 600 600 0 104 282 235 c 0 0 0 0 0 0 0 0 0 72 7 0 0 0 0 125 15 54 g 0 0 0 0 0 0 0 0 0 47 27 0 0 0 600 57 135 233 t 0 0 0 0 0 0 0 0 0 79 217 0 0 0 0 314 168 78
DOF1_PBF1_Mo17_1_EEAD0326_EEADannot_shift4 (DOF1_PBF1_Mo17_1:EEAD0326:EEADannot)	0.799	0.533	8.203	0.906	0.911	505	592	38	470	508	422.600		; assembly_12 versus DOF1_PBF1_Mo17_1_EEAD0326_EEADannot (DOF1_PBF1_Mo17_1:EEAD0326:EEADannot); m=35/115; ncol2=15; w=-4; offset=-4; strand=D; shift=4; score= 422.6; ----acrsyaAAAAGkwA ; cor=0.799; Ncor=0.533; logoDP=8.203; NsEucl=0.906; NSW=0.911; rcor=505; rNcor=592; rlogoDP=38; rNsEucl=470; rNSW=508; rank_mean=422.600; match_rank= a 0 0 0 0 60 23 31 14 10 64 83 100 97 97 0 1 36 72 c 0 0 0 0 10 44 10 26 38 12 2 0 0 0 0 10 23 5 g 0 0 0 0 14 14 43 50 14 20 3 0 0 3 100 34 9 20 t 0 0 0 0 16 19 16 10 38 4 12 0 3 0 0 55 32 3
GTL1_MA1661.2_JASPAR_shift6 (GTL1:MA1661.2:JASPAR)	0.883	0.442	5.761	0.898	0.938	148	924	258	627	207	432.800		; assembly_12 versus GTL1_MA1661.2_JASPAR (GTL1:MA1661.2:JASPAR); m=36/115; ncol2=8; w=-2; offset=-2; strand=D; shift=6; score= 432.8; ------GGTwAAAA---- ; cor=0.883; Ncor=0.442; logoDP=5.761; NsEucl=0.898; NSW=0.938; rcor=148; rNcor=924; rlogoDP=258; rNsEucl=627; rNSW=207; rank_mean=432.800; match_rank= a 0 0 0 0 0 0 24 42 48 300 1038 1033 996 954 0 0 0 0 c 0 0 0 0 0 0 7 5 3 17 5 13 11 18 0 0 0 0 g 0 0 0 0 0 0 1023 1020 93 74 12 10 13 23 0 0 0 0 t 0 0 0 0 0 0 19 6 929 682 18 17 53 78 0 0 0 0
AT5G63260.ampDAP_M0343_AthalianaCistrome_shift8 (AT5G63260.ampDAP:M0343:AthalianaCistrome)	0.769	0.699	8.628	0.897	0.893	673	107	18	658	714	434.000		; assembly_12 versus AT5G63260.ampDAP_M0343_AthalianaCistrome (AT5G63260.ampDAP:M0343:AthalianaCistrome); m=37/115; ncol2=11; w=0; offset=0; strand=D; shift=8; score= 434; --------sAAAAAGTda ; cor=0.769; Ncor=0.699; logoDP=8.628; NsEucl=0.897; NSW=0.893; rcor=673; rNcor=107; rlogoDP=18; rNsEucl=658; rNSW=714; rank_mean=434.000; match_rank= a 0 0 0 0 0 0 0 0 101 547 502 594 600 591 0 5 205 407 c 0 0 0 0 0 0 0 0 199 0 1 6 0 0 0 45 31 29 g 0 0 0 0 0 0 0 0 173 29 0 0 0 9 600 135 165 93 t 0 0 0 0 0 0 0 0 127 24 97 0 0 0 0 415 199 71
At4g38000.ampDAP_M0275_AthalianaCistrome_shift8 (At4g38000.ampDAP:M0275:AthalianaCistrome)	0.765	0.696	8.538	0.897	0.893	695	112	23	656	712	439.600		; assembly_12 versus At4g38000.ampDAP_M0275_AthalianaCistrome (At4g38000.ampDAP:M0275:AthalianaCistrome); m=38/115; ncol2=11; w=0; offset=0; strand=D; shift=8; score= 439.6; --------sAWAAAGTwa ; cor=0.765; Ncor=0.696; logoDP=8.538; NsEucl=0.897; NSW=0.893; rcor=695; rNcor=112; rlogoDP=23; rNsEucl=656; rNSW=712; rank_mean=439.600; match_rank= a 0 0 0 0 0 0 0 0 131 524 423 599 599 599 0 20 231 346 c 0 0 0 0 0 0 0 0 181 23 0 0 0 0 0 46 35 35 g 0 0 0 0 0 0 0 0 213 24 0 0 0 0 599 110 74 145 t 0 0 0 0 0 0 0 0 74 28 176 0 0 0 0 423 259 73
AT5G63260.DAP_M0340_AthalianaCistrome_shift8 (AT5G63260.DAP:M0340:AthalianaCistrome)	0.761	0.692	8.523	0.897	0.893	712	116	25	659	715	445.400		; assembly_12 versus AT5G63260.DAP_M0340_AthalianaCistrome (AT5G63260.DAP:M0340:AthalianaCistrome); m=39/115; ncol2=11; w=0; offset=0; strand=D; shift=8; score= 445.4; --------sAWAAAGKdr ; cor=0.761; Ncor=0.692; logoDP=8.523; NsEucl=0.897; NSW=0.893; rcor=712; rNcor=116; rlogoDP=25; rNsEucl=659; rNSW=715; rank_mean=445.400; match_rank= a 0 0 0 0 0 0 0 0 109 453 433 600 600 599 0 0 191 380 c 0 0 0 0 0 0 0 0 163 28 0 0 0 0 0 25 41 6 g 0 0 0 0 0 0 0 0 197 70 0 0 0 1 600 164 154 176 t 0 0 0 0 0 0 0 0 131 49 167 0 0 0 0 411 214 38
OBP4.ampDAP_M0261_AthalianaCistrome_shift2 (OBP4.ampDAP:M0261:AthalianaCistrome)	0.810	0.426	8.530	0.908	0.915	456	973	24	430	476	471.800		; assembly_12 versus OBP4.ampDAP_M0261_AthalianaCistrome (OBP4.ampDAP:M0261:AthalianaCistrome); m=40/115; ncol2=19; w=-6; offset=-6; strand=D; shift=2; score= 471.8; --waaaaacAAAAAGtwa ; cor=0.810; Ncor=0.426; logoDP=8.530; NsEucl=0.908; NSW=0.915; rcor=456; rNcor=973; rlogoDP=24; rNsEucl=430; rNSW=476; rank_mean=471.800; match_rank= a 0 0 283 256 298 328 243 221 145 527 483 600 600 583 0 54 263 344 c 0 0 64 79 70 75 88 119 203 6 0 0 0 0 0 84 37 42 g 0 0 81 127 94 111 146 137 143 31 0 0 0 17 600 135 88 130 t 0 0 172 138 138 86 123 123 109 36 117 0 0 0 0 327 212 84
DOF24_B73_2_m1_EEAD0327_EEADannot_rc_shift9 (DOF24_B73_2_m1:EEAD0327:EEADannot_rc)	0.854	0.480	2.907	0.910	0.928	250	780	657	380	320	477.400		; assembly_12 versus DOF24_B73_2_m1_EEAD0327_EEADannot_rc (DOF24_B73_2_m1:EEAD0327:EEADannot_rc); m=41/115; ncol2=15; w=0; offset=1; strand=R; shift=9; score= 477.4; ---------AAAAAGbwr ; cor=0.854; Ncor=0.480; logoDP=2.907; NsEucl=0.910; NSW=0.928; rcor=250; rNcor=780; rlogoDP=657; rNsEucl=380; rNSW=320; rank_mean=477.400; match_rank= a 0 0 0 0 0 0 0 0 0 74 91 100 99 98 5 3 31 58 c 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 27 6 1 g 0 0 0 0 0 0 0 0 0 15 2 0 0 2 95 28 7 39 t 0 0 0 0 0 0 0 0 0 4 7 0 1 0 0 42 56 2
At1g64620.DAP_M0263_AthalianaCistrome_shift2 (At1g64620.DAP:M0263:AthalianaCistrome)	0.806	0.424	8.906	0.906	0.912	471	982	12	465	502	486.400		; assembly_12 versus At1g64620.DAP_M0263_AthalianaCistrome (At1g64620.DAP:M0263:AthalianaCistrome); m=42/115; ncol2=19; w=-6; offset=-6; strand=D; shift=2; score= 486.4; --wwaaaamAAAAAGkwa ; cor=0.806; Ncor=0.424; logoDP=8.906; NsEucl=0.906; NSW=0.912; rcor=471; rNcor=982; rlogoDP=12; rNsEucl=465; rNSW=502; rank_mean=486.400; match_rank= a 0 0 303 255 282 299 288 213 177 507 513 600 600 600 0 53 233 406 c 0 0 50 64 88 67 80 111 169 27 0 0 0 0 0 61 28 13 g 0 0 80 109 109 105 113 137 128 47 0 0 0 0 600 168 106 125 t 0 0 167 172 121 129 119 139 126 19 87 0 0 0 0 318 233 56
C3H67_UN0851.1_JASPAR_shift9 (C3H67:UN0851.1:JASPAR)	0.777	0.636	8.635	0.887	0.886	632	224	17	811	793	495.400		; assembly_12 versus C3H67_UN0851.1_JASPAR (C3H67:UN0851.1:JASPAR); m=43/115; ncol2=10; w=0; offset=1; strand=D; shift=9; score= 495.4; ---------AAAAAGTda ; cor=0.777; Ncor=0.636; logoDP=8.635; NsEucl=0.887; NSW=0.886; rcor=632; rNcor=224; rlogoDP=17; rNsEucl=811; rNSW=793; rank_mean=495.400; match_rank= a 0 0 0 0 0 0 0 0 0 911 836 990 1000 985 0 8 341 678 c 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 75 51 48 g 0 0 0 0 0 0 0 0 0 48 0 0 0 15 1000 225 275 155 t 0 0 0 0 0 0 0 0 0 40 161 0 0 0 0 691 331 118
DOF5.6_MA0983.1_JASPAR_shift8 (DOF5.6:MA0983.1:JASPAR)	0.816	0.653	4.577	0.889	0.901	414	185	444	797	639	495.800		; assembly_12 versus DOF5.6_MA0983.1_JASPAR (DOF5.6:MA0983.1:JASPAR); m=44/115; ncol2=8; w=0; offset=0; strand=D; shift=8; score= 495.8; --------vawAAmGt-- ; cor=0.816; Ncor=0.653; logoDP=4.577; NsEucl=0.889; NSW=0.901; rcor=414; rNcor=185; rlogoDP=444; rNsEucl=797; rNSW=639; rank_mean=495.800; match_rank= a 0 0 0 0 0 0 0 0 254 364 432 955 928 613 50 152 0 0 c 0 0 0 0 0 0 0 0 257 170 84 35 40 308 28 247 0 0 g 0 0 0 0 0 0 0 0 262 227 108 1 1 56 884 213 0 0 t 0 0 0 0 0 0 0 0 228 239 376 10 32 24 38 388 0 0
DOF5.6_M0657_1.02_CISBP_shift8 (DOF5.6:M0657_1.02:CISBP)	0.816	0.653	4.564	0.888	0.900	418	186	445	802	643	498.800		; assembly_12 versus DOF5.6_M0657_1.02_CISBP (DOF5.6:M0657_1.02:CISBP); m=45/115; ncol2=8; w=0; offset=0; strand=D; shift=8; score= 498.8; --------vawAAmGy-- ; cor=0.816; Ncor=0.653; logoDP=4.564; NsEucl=0.888; NSW=0.900; rcor=418; rNcor=186; rlogoDP=445; rNsEucl=802; rNSW=643; rank_mean=498.800; match_rank= a 0 0 0 0 0 0 0 0 25 36 43 95 93 61 5 15 0 0 c 0 0 0 0 0 0 0 0 26 17 8 4 4 31 3 25 0 0 g 0 0 0 0 0 0 0 0 26 23 11 0 0 6 88 21 0 0 t 0 0 0 0 0 0 0 0 23 24 38 1 3 2 4 39 0 0
DOF1.5_MA1279.2_JASPAR_shift4 (DOF1.5:MA1279.2:JASPAR)	0.785	0.491	8.511	0.902	0.905	578	747	26	549	595	499.000		; assembly_12 versus DOF1.5_MA1279.2_JASPAR (DOF1.5:MA1279.2:JASPAR); m=46/115; ncol2=16; w=-4; offset=-4; strand=D; shift=4; score= 499; ----aaaarAAAAAGtra ; cor=0.785; Ncor=0.491; logoDP=8.511; NsEucl=0.902; NSW=0.905; rcor=578; rNcor=747; rlogoDP=26; rNsEucl=549; rNSW=595; rank_mean=499.000; match_rank= a 0 0 0 0 329 329 301 251 184 440 486 599 599 591 0 46 232 325 c 0 0 0 0 75 55 61 73 94 34 8 1 0 0 0 35 22 122 g 0 0 0 0 121 114 143 147 199 71 1 0 1 9 600 140 273 41 t 0 0 0 0 75 102 95 129 123 55 105 0 0 0 0 379 73 112
OBP4_MA1280.1_JASPAR_shift8 (OBP4:MA1280.1:JASPAR)	0.773	0.552	8.587	0.899	0.897	651	526	21	623	675	499.200		; assembly_12 versus OBP4_MA1280.1_JASPAR (OBP4:MA1280.1:JASPAR); m=47/115; ncol2=14; w=0; offset=0; strand=D; shift=8; score= 499.2; --------sAAAAAGkwa ; cor=0.773; Ncor=0.552; logoDP=8.587; NsEucl=0.899; NSW=0.897; rcor=651; rNcor=526; rlogoDP=21; rNsEucl=623; rNSW=675; rank_mean=499.200; match_rank= a 0 0 0 0 0 0 0 0 142 529 456 599 600 600 0 22 193 387 c 0 0 0 0 0 0 0 0 194 17 0 0 0 0 0 37 23 32 g 0 0 0 0 0 0 0 0 174 34 3 0 0 0 600 209 127 131 t 0 0 0 0 0 0 0 0 90 20 141 1 0 0 0 332 257 50
AT1G47655_MA1275.1_JASPAR_shift7 (AT1G47655:MA1275.1:JASPAR)	0.740	0.673	7.804	0.894	0.887	815	144	59	713	781	502.400		; assembly_12 versus AT1G47655_MA1275.1_JASPAR (AT1G47655:MA1275.1:JASPAR); m=48/115; ncol2=11; w=-1; offset=-1; strand=D; shift=7; score= 502.4; -------rsawAAAGTrr ; cor=0.740; Ncor=0.673; logoDP=7.804; NsEucl=0.894; NSW=0.887; rcor=815; rNcor=144; rlogoDP=59; rNsEucl=713; rNSW=781; rank_mean=502.400; match_rank= a 0 0 0 0 0 0 0 158 132 343 332 600 600 544 0 0 342 298 c 0 0 0 0 0 0 0 144 158 84 2 0 0 0 0 86 1 45 g 0 0 0 0 0 0 0 154 204 88 3 0 0 56 600 23 227 155 t 0 0 0 0 0 0 0 144 106 85 263 0 0 0 0 491 30 102
DAG2.ampDAP_M0266_AthalianaCistrome_shift8 (DAG2.ampDAP:M0266:AthalianaCistrome)	0.760	0.585	8.597	0.896	0.891	716	411	20	682	750	515.800		; assembly_12 versus DAG2.ampDAP_M0266_AthalianaCistrome (DAG2.ampDAP:M0266:AthalianaCistrome); m=49/115; ncol2=13; w=0; offset=0; strand=D; shift=8; score= 515.8; --------cAAAAAGkka ; cor=0.760; Ncor=0.585; logoDP=8.597; NsEucl=0.896; NSW=0.891; rcor=716; rNcor=411; rlogoDP=20; rNsEucl=682; rNSW=750; rank_mean=515.800; match_rank= a 0 0 0 0 0 0 0 0 140 529 457 598 598 596 0 1 142 403 c 0 0 0 0 0 0 0 0 191 2 0 0 0 0 0 21 70 25 g 0 0 0 0 0 0 0 0 143 42 0 0 0 2 598 214 159 122 t 0 0 0 0 0 0 0 0 124 25 141 0 0 0 0 362 227 48
OBP3.ampDAP_M0274_AthalianaCistrome_rc_shift8 (OBP3.ampDAP:M0274:AthalianaCistrome_rc)	0.851	0.448	0.334	0.920	0.935	254	899	983	233	238	521.400		; assembly_12 versus OBP3.ampDAP_M0274_AthalianaCistrome_rc (OBP3.ampDAP:M0274:AthalianaCistrome_rc); m=50/115; ncol2=19; w=0; offset=0; strand=R; shift=8; score= 521.4; --------maAAAAGtwa ; cor=0.851; Ncor=0.448; logoDP=0.334; NsEucl=0.920; NSW=0.935; rcor=254; rNcor=899; rlogoDP=983; rNsEucl=233; rNSW=238; rank_mean=521.400; match_rank= a 0 0 0 0 0 0 0 0 162 377 440 600 599 591 0 143 293 379 c 0 0 0 0 0 0 0 0 156 65 23 0 0 0 0 115 47 18 g 0 0 0 0 0 0 0 0 138 81 44 0 1 9 600 114 78 136 t 0 0 0 0 0 0 0 0 144 77 93 0 0 0 0 228 182 67
DOF4.2_MA1273.2_JASPAR_shift9 (DOF4.2:MA1273.2:JASPAR)	0.780	0.585	9.394	0.887	0.886	620	410	11	812	795	529.600		; assembly_12 versus DOF4.2_MA1273.2_JASPAR (DOF4.2:MA1273.2:JASPAR); m=51/115; ncol2=11; w=0; offset=1; strand=D; shift=9; score= 529.6; ---------AAAAAGGya ; cor=0.780; Ncor=0.585; logoDP=9.394; NsEucl=0.887; NSW=0.886; rcor=620; rNcor=410; rlogoDP=11; rNsEucl=812; rNSW=795; rank_mean=529.600; match_rank= a 0 0 0 0 0 0 0 0 0 477 580 598 598 598 0 112 89 346 c 0 0 0 0 0 0 0 0 0 38 0 0 0 0 0 0 253 60 g 0 0 0 0 0 0 0 0 0 48 0 0 0 0 598 463 28 70 t 0 0 0 0 0 0 0 0 0 35 18 0 0 0 0 23 228 122
dof45.ampDAP_M0280_AthalianaCistrome_shift8 (dof45.ampDAP:M0280:AthalianaCistrome)	0.766	0.511	7.707	0.900	0.900	690	675	70	598	650	536.600		; assembly_12 versus dof45.ampDAP_M0280_AthalianaCistrome (dof45.ampDAP:M0280:AthalianaCistrome); m=52/115; ncol2=15; w=0; offset=0; strand=D; shift=8; score= 536.6; --------aawAAAGtrr ; cor=0.766; Ncor=0.511; logoDP=7.707; NsEucl=0.900; NSW=0.900; rcor=690; rNcor=675; rlogoDP=70; rNsEucl=598; rNSW=650; rank_mean=536.600; match_rank= a 0 0 0 0 0 0 0 0 174 281 271 512 516 519 0 87 354 131 c 0 0 0 0 0 0 0 0 94 80 10 2 0 0 0 81 3 50 g 0 0 0 0 0 0 0 0 128 57 44 7 3 3 522 27 132 275 t 0 0 0 0 0 0 0 0 126 104 197 1 3 0 0 327 33 66
DOF3.4_MA1278.2_JASPAR_rc_shift9 (DOF3.4:MA1278.2:JASPAR_rc)	0.865	0.433	0.265	0.915	0.935	206	950	1027	289	236	541.600		; assembly_12 versus DOF3.4_MA1278.2_JASPAR_rc (DOF3.4:MA1278.2:JASPAR_rc); m=53/115; ncol2=17; w=0; offset=1; strand=R; shift=9; score= 541.6; ---------aAAAAGywr ; cor=0.865; Ncor=0.433; logoDP=0.265; NsEucl=0.915; NSW=0.935; rcor=206; rNcor=950; rlogoDP=1027; rNsEucl=289; rNSW=236; rank_mean=541.600; match_rank= a 0 0 0 0 0 0 0 0 0 332 426 600 593 586 0 93 303 367 c 0 0 0 0 0 0 0 0 0 104 0 0 0 0 0 157 43 17 g 0 0 0 0 0 0 0 0 0 105 29 0 7 14 600 146 93 169 t 0 0 0 0 0 0 0 0 0 59 145 0 0 0 0 204 161 47
AT3G52440_MA1276.1_JASPAR_shift8 (AT3G52440:MA1276.1:JASPAR)	0.728	0.662	8.288	0.890	0.880	895	170	35	769	842	542.200		; assembly_12 versus AT3G52440_MA1276.1_JASPAR (AT3G52440:MA1276.1:JASPAR); m=54/115; ncol2=11; w=0; offset=0; strand=D; shift=8; score= 542.2; --------sAwAAAGkda ; cor=0.728; Ncor=0.662; logoDP=8.288; NsEucl=0.890; NSW=0.880; rcor=895; rNcor=170; rlogoDP=35; rNsEucl=769; rNSW=842; rank_mean=542.200; match_rank= a 0 0 0 0 0 0 0 0 107 467 348 599 599 599 0 2 169 348 c 0 0 0 0 0 0 0 0 206 4 0 0 0 0 0 6 31 48 g 0 0 0 0 0 0 0 0 187 103 0 0 0 0 599 219 198 136 t 0 0 0 0 0 0 0 0 99 25 251 0 0 0 0 372 201 67
AT1G47655.ampDAP_M0271_AthalianaCistrome_rc_shift7 (AT1G47655.ampDAP:M0271:AthalianaCistrome_rc)	0.815	0.543	0.380	0.911	0.921	422	562	966	358	404	542.400		; assembly_12 versus AT1G47655.ampDAP_M0271_AthalianaCistrome_rc (AT1G47655.ampDAP:M0271:AthalianaCistrome_rc); m=55/115; ncol2=15; w=-1; offset=-1; strand=R; shift=7; score= 542.4; -------araaAAAGaaA ; cor=0.815; Ncor=0.543; logoDP=0.380; NsEucl=0.911; NSW=0.921; rcor=422; rNcor=562; rlogoDP=966; rNsEucl=358; rNSW=404; rank_mean=542.400; match_rank= a 0 0 0 0 0 0 0 264 197 352 353 516 559 529 15 210 348 424 c 0 0 0 0 0 0 0 72 138 82 61 0 0 0 5 134 79 12 g 0 0 0 0 0 0 0 119 183 108 63 51 12 42 551 97 66 120 t 0 0 0 0 0 0 0 116 53 29 94 4 0 0 0 130 78 15
DAG2_DAG2_ArabidopsisPBM_shift8 (DAG2:DAG2:ArabidopsisPBM)	0.723	0.723	6.845	0.892	0.883	918	66	164	747	821	543.200		; assembly_12 versus DAG2_DAG2_ArabidopsisPBM (DAG2:DAG2:ArabidopsisPBM); m=56/115; ncol2=10; w=0; offset=0; strand=D; shift=8; score= 543.2; --------sAwAARGTgr ; cor=0.723; Ncor=0.723; logoDP=6.845; NsEucl=0.892; NSW=0.883; rcor=918; rNcor=66; rlogoDP=164; rNsEucl=747; rNSW=821; rank_mean=543.200; match_rank= a 0 0 0 0 0 0 0 0 16 75 60 99 98 74 0 1 24 39 c 0 0 0 0 0 0 0 0 41 3 0 0 0 1 0 20 4 18 g 0 0 0 0 0 0 0 0 31 18 1 0 1 25 98 6 56 30 t 0 0 0 0 0 0 0 0 12 4 39 1 1 0 2 73 16 13
BBX31.DAP_M0718_AthalianaCistrome_shift9 (BBX31.DAP:M0718:AthalianaCistrome)	0.802	0.451	8.203	0.895	0.902	491	885	37	683	626	544.400		; assembly_12 versus BBX31.DAP_M0718_AthalianaCistrome (BBX31.DAP:M0718:AthalianaCistrome); m=57/115; ncol2=15; w=0; offset=1; strand=D; shift=9; score= 544.4; ---------AAAAAGtaA ; cor=0.802; Ncor=0.451; logoDP=8.203; NsEucl=0.895; NSW=0.902; rcor=491; rNcor=885; rlogoDP=37; rNsEucl=683; rNSW=626; rank_mean=544.400; match_rank= a 0 0 0 0 0 0 0 0 0 477 483 600 600 548 0 118 342 464 c 0 0 0 0 0 0 0 0 0 26 1 0 0 0 0 94 23 1 g 0 0 0 0 0 0 0 0 0 66 1 0 0 52 600 66 95 114 t 0 0 0 0 0 0 0 0 0 31 115 0 0 0 0 322 140 21
dof24.ampDAP_M0269_AthalianaCistrome_shift3 (dof24.ampDAP:M0269:AthalianaCistrome)	0.765	0.510	8.357	0.897	0.894	692	680	33	652	703	552.000		; assembly_12 versus dof24.ampDAP_M0269_AthalianaCistrome (dof24.ampDAP:M0269:AthalianaCistrome); m=58/115; ncol2=15; w=-5; offset=-5; strand=D; shift=3; score= 552; ---wwaaacAWAAAGTda ; cor=0.765; Ncor=0.510; logoDP=8.357; NsEucl=0.897; NSW=0.894; rcor=692; rNcor=680; rlogoDP=33; rNsEucl=652; rNSW=703; rank_mean=552.000; match_rank= a 0 0 0 261 265 287 237 233 122 551 433 597 597 580 0 10 215 324 c 0 0 0 80 63 76 93 122 202 0 0 0 0 0 0 55 32 38 g 0 0 0 102 107 95 134 126 137 29 0 0 0 17 597 120 173 146 t 0 0 0 154 162 139 133 116 136 17 164 0 0 0 0 412 177 89
CDF3.DAP_M0268_AthalianaCistrome_shift2 (CDF3.DAP:M0268:AthalianaCistrome)	0.785	0.413	8.665	0.902	0.904	580	1025	15	561	606	557.400		; assembly_12 versus CDF3.DAP_M0268_AthalianaCistrome (CDF3.DAP:M0268:AthalianaCistrome); m=59/115; ncol2=19; w=-6; offset=-6; strand=D; shift=2; score= 557.4; --aaaaargAAAAAGtra ; cor=0.785; Ncor=0.413; logoDP=8.665; NsEucl=0.902; NSW=0.904; rcor=580; rNcor=1025; rlogoDP=15; rNsEucl=561; rNSW=606; rank_mean=557.400; match_rank= a 0 0 353 339 333 301 272 195 142 455 512 600 600 584 0 29 165 317 c 0 0 53 27 47 36 73 93 144 31 0 0 0 0 0 56 20 141 g 0 0 71 117 113 149 137 178 175 79 3 0 0 16 600 131 328 27 t 0 0 123 117 107 114 118 134 139 35 85 0 0 0 0 384 87 115
DOF24_Mo17_1_EEAD0328_EEADannot_rc_shift9 (DOF24_Mo17_1:EEAD0328:EEADannot_rc)	0.815	0.458	4.337	0.900	0.911	424	857	467	586	513	569.400		; assembly_12 versus DOF24_Mo17_1_EEAD0328_EEADannot_rc (DOF24_Mo17_1:EEAD0328:EEADannot_rc); m=60/115; ncol2=15; w=0; offset=1; strand=R; shift=9; score= 569.4; ---------rAAAAGkwR ; cor=0.815; Ncor=0.458; logoDP=4.337; NsEucl=0.900; NSW=0.911; rcor=424; rNcor=857; rlogoDP=467; rNsEucl=586; rNSW=513; rank_mean=569.400; match_rank= a 0 0 0 0 0 0 0 0 0 60 86 99 100 92 9 4 29 71 c 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 16 8 0 g 0 0 0 0 0 0 0 0 0 30 8 0 0 8 86 46 4 28 t 0 0 0 0 0 0 0 0 0 5 5 1 0 0 5 34 59 1
ORE_EEAD0012_EEADannot_shift7 (ORE:EEAD0012:EEADannot)	0.764	0.625	10.142	0.876	0.861	703	267	1	933	993	579.400		; assembly_12 versus ORE_EEAD0012_EEADannot (ORE:EEAD0012:EEADannot); m=61/115; ncol2=10; w=-1; offset=-1; strand=D; shift=7; score= 579.4; -------sGGAAAAGyw- ; cor=0.764; Ncor=0.625; logoDP=10.142; NsEucl=0.876; NSW=0.861; rcor=703; rNcor=267; rlogoDP=1; rNsEucl=933; rNSW=993; rank_mean=579.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 100 100 100 100 0 0 50 0 c 0 0 0 0 0 0 0 50 0 0 0 0 0 0 0 50 0 0 g 0 0 0 0 0 0 0 50 100 100 0 0 0 0 100 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50 50 0
AT2G28810.ampDAP_M0245_AthalianaCistrome_rc_shift4 (AT2G28810.ampDAP:M0245:AthalianaCistrome_rc)	0.806	0.537	0.371	0.908	0.914	475	578	969	437	482	588.200		; assembly_12 versus AT2G28810.ampDAP_M0245_AthalianaCistrome_rc (AT2G28810.ampDAP:M0245:AthalianaCistrome_rc); m=62/115; ncol2=15; w=-4; offset=-4; strand=R; shift=4; score= 588.2; ----aaarsAWAAAGtra ; cor=0.806; Ncor=0.537; logoDP=0.371; NsEucl=0.908; NSW=0.914; rcor=475; rNcor=578; rlogoDP=969; rNsEucl=437; rNSW=482; rank_mean=588.200; match_rank= a 0 0 0 0 336 305 256 213 118 513 449 600 600 562 0 76 273 371 c 0 0 0 0 45 60 106 94 195 1 0 0 0 0 0 110 57 48 g 0 0 0 0 87 140 143 167 185 78 0 0 0 38 600 137 154 124 t 0 0 0 0 132 95 95 126 102 8 151 0 0 0 0 277 116 57
ONAC127_UN0430.2_JASPAR_shift7 (ONAC127:UN0430.2:JASPAR)	0.813	0.518	5.460	0.879	0.898	434	655	302	898	671	592.000		; assembly_12 versus ONAC127_UN0430.2_JASPAR (ONAC127:UN0430.2:JASPAR); m=63/115; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score= 592; -------AAGAAAAG--- ; cor=0.813; Ncor=0.518; logoDP=5.460; NsEucl=0.879; NSW=0.898; rcor=434; rNcor=655; rlogoDP=302; rNsEucl=898; rNSW=671; rank_mean=592.000; match_rank= a 0 0 0 0 0 0 0 65 67 4 57 61 63 58 3 0 0 0 c 0 0 0 0 0 0 0 0 0 0 2 5 0 1 7 0 0 0 g 0 0 0 0 0 0 0 0 0 62 7 1 5 3 56 0 0 0 t 0 0 0 0 0 0 0 3 1 2 2 1 0 6 2 0 0 0
DOF5.4_MA1280.2_JASPAR_shift9 (DOF5.4:MA1280.2:JASPAR)	0.796	0.557	8.573	0.866	0.873	520	514	22	1000	909	593.000		; assembly_12 versus DOF5.4_MA1280.2_JASPAR (DOF5.4:MA1280.2:JASPAR); m=64/115; ncol2=7; w=0; offset=1; strand=D; shift=9; score= 593; ---------AAAAAGk-- ; cor=0.796; Ncor=0.557; logoDP=8.573; NsEucl=0.866; NSW=0.873; rcor=520; rNcor=514; rlogoDP=22; rNsEucl=1000; rNSW=909; rank_mean=593.000; match_rank= a 0 0 0 0 0 0 0 0 0 529 456 599 600 600 0 22 0 0 c 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 37 0 0 g 0 0 0 0 0 0 0 0 0 34 3 0 0 0 600 209 0 0 t 0 0 0 0 0 0 0 0 0 20 141 1 0 0 0 332 0 0
dof4.2_MA1273.1_JASPAR_shift4 (dof4.2:MA1273.1:JASPAR)	0.779	0.410	9.395	0.898	0.896	621	1042	10	635	686	598.800		; assembly_12 versus dof4.2_MA1273.1_JASPAR (dof4.2:MA1273.1:JASPAR); m=65/115; ncol2=19; w=-4; offset=-4; strand=D; shift=4; score= 598.8; ----aaaarAAAAAGGya ; cor=0.779; Ncor=0.410; logoDP=9.395; NsEucl=0.898; NSW=0.896; rcor=621; rNcor=1042; rlogoDP=10; rNsEucl=635; rNSW=686; rank_mean=598.800; match_rank= a 0 0 0 0 288 281 303 236 214 477 580 598 598 598 0 112 89 346 c 0 0 0 0 70 98 73 75 110 38 0 0 0 0 0 0 253 60 g 0 0 0 0 106 96 108 145 166 48 0 0 0 0 598 463 28 70 t 0 0 0 0 134 123 114 142 108 35 18 0 0 0 0 23 228 122
e_gw1.149.93.1_M0658_1.02_CISBP_shift8 (e_gw1.149.93.1:M0658_1.02:CISBP)	0.835	0.668	1.770	0.877	0.879	324	156	764	910	845	599.800		; assembly_12 versus e_gw1.149.93.1_M0658_1.02_CISBP (e_gw1.149.93.1:M0658_1.02:CISBP); m=66/115; ncol2=8; w=0; offset=0; strand=D; shift=8; score= 599.8; --------vrwaAmGy-- ; cor=0.835; Ncor=0.668; logoDP=1.770; NsEucl=0.877; NSW=0.879; rcor=324; rNcor=156; rlogoDP=764; rNsEucl=910; rNSW=845; rank_mean=599.800; match_rank= a 0 0 0 0 0 0 0 0 26 33 40 65 70 57 8 17 0 0 c 0 0 0 0 0 0 0 0 26 20 14 13 11 25 8 26 0 0 g 0 0 0 0 0 0 0 0 26 25 16 8 5 0 76 23 0 0 t 0 0 0 0 0 0 0 0 22 22 30 14 14 18 8 34 0 0
MBD2_MA2370.1_JASPAR_shift13 (MBD2:MA2370.1:JASPAR)	0.845	0.423	3.398	0.882	0.931	278	997	589	869	287	604.000		; assembly_12 versus MBD2_MA2370.1_JASPAR (MBD2:MA2370.1:JASPAR); m=67/115; ncol2=5; w=0; offset=5; strand=D; shift=13; score= 604; -------------AGCTr ; cor=0.845; Ncor=0.423; logoDP=3.398; NsEucl=0.882; NSW=0.931; rcor=278; rNcor=997; rlogoDP=589; rNsEucl=869; rNSW=287; rank_mean=604.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 808 0 190 98 315 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 808 0 27 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 900 0 0 432 t 0 0 0 0 0 0 0 0 0 0 0 0 0 190 98 0 900 224
TREE1_MA1801.2_JASPAR_shift13 (TREE1:MA1801.2:JASPAR)	0.845	0.422	3.391	0.882	0.931	279	998	591	870	288	605.200		; assembly_12 versus TREE1_MA1801.2_JASPAR (TREE1:MA1801.2:JASPAR); m=68/115; ncol2=5; w=0; offset=5; strand=D; shift=13; score= 605.2; -------------AGCTr ; cor=0.845; Ncor=0.422; logoDP=3.391; NsEucl=0.882; NSW=0.931; rcor=279; rNcor=998; rlogoDP=591; rNsEucl=870; rNSW=288; rank_mean=605.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 809 0 191 99 316 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 809 0 27 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 901 0 0 433 t 0 0 0 0 0 0 0 0 0 0 0 0 0 191 99 0 901 224
At3g45610.ampDAP_M0254_AthalianaCistrome_rc_shift8 (At3g45610.ampDAP:M0254:AthalianaCistrome_rc)	0.801	0.534	0.358	0.906	0.911	500	587	975	473	510	609.000		; assembly_12 versus At3g45610.ampDAP_M0254_AthalianaCistrome_rc (At3g45610.ampDAP:M0254:AthalianaCistrome_rc); m=69/115; ncol2=15; w=0; offset=0; strand=R; shift=8; score= 609; --------sAAAAAGkwa ; cor=0.801; Ncor=0.534; logoDP=0.358; NsEucl=0.906; NSW=0.911; rcor=500; rNcor=587; rlogoDP=975; rNsEucl=473; rNSW=510; rank_mean=609.000; match_rank= a 0 0 0 0 0 0 0 0 115 498 460 600 600 599 0 59 223 407 c 0 0 0 0 0 0 0 0 222 28 2 0 0 0 0 83 70 26 g 0 0 0 0 0 0 0 0 196 61 0 0 0 1 600 198 101 128 t 0 0 0 0 0 0 0 0 67 13 138 0 0 0 0 260 206 39
DOF4.3_MA1747.1_JASPAR_shift9 (DOF4.3:MA1747.1:JASPAR)	0.770	0.462	7.879	0.891	0.893	670	846	54	759	721	610.000		; assembly_12 versus DOF4.3_MA1747.1_JASPAR (DOF4.3:MA1747.1:JASPAR); m=70/115; ncol2=14; w=0; offset=1; strand=D; shift=9; score= 610; ---------awAAAGwrg ; cor=0.770; Ncor=0.462; logoDP=7.879; NsEucl=0.891; NSW=0.893; rcor=670; rNcor=846; rlogoDP=54; rNsEucl=759; rNSW=721; rank_mean=610.000; match_rank= a 0 0 0 0 0 0 0 0 0 393 434 1000 1000 1000 0 302 578 188 c 0 0 0 0 0 0 0 0 0 203 63.793 0 0 0 0 178 1.724 147 g 0 0 0 0 0 0 0 0 0 186 116 0 0 0 1000 91.379 345 570.69 t 0 0 0 0 0 0 0 0 0 217 386 0 0 0 0 429.31 75.862 94.828
DOF3.2_MA1270.2_JASPAR_rc_shift2 (DOF3.2:MA1270.2:JASPAR_rc)	0.812	0.507	0.246	0.909	0.916	443	697	1043	415	459	611.400		; assembly_12 versus DOF3.2_MA1270.2_JASPAR_rc (DOF3.2:MA1270.2:JASPAR_rc); m=71/115; ncol2=16; w=-6; offset=-6; strand=R; shift=2; score= 611.4; --aaaarrsAAAAAGtwr ; cor=0.812; Ncor=0.507; logoDP=0.246; NsEucl=0.909; NSW=0.916; rcor=443; rNcor=697; rlogoDP=1043; rNsEucl=415; rNSW=459; rank_mean=611.400; match_rank= a 0 0 327 328 397 363 267 153 120 496 465 600 599 600 0 58 285 323 c 0 0 55 48 59 56 57 107 176 10 0 0 1 0 0 85 27 51 g 0 0 92 120 55 98 189 211 175 55 0 0 0 0 600 138 111 151 t 0 0 126 104 89 83 87 129 129 39 135 0 0 0 0 319 177 75
CDF3.ampDAP_M0259_AthalianaCistrome_rc_shift1 (CDF3.ampDAP:M0259:AthalianaCistrome_rc)	0.816	0.453	0.292	0.911	0.920	416	882	1005	375	422	620.000		; assembly_12 versus CDF3.ampDAP_M0259_AthalianaCistrome_rc (CDF3.ampDAP:M0259:AthalianaCistrome_rc); m=72/115; ncol2=18; w=-7; offset=-7; strand=R; shift=1; score= 620; -aAAAardraAAAAGtrm ; cor=0.816; Ncor=0.453; logoDP=0.292; NsEucl=0.911; NSW=0.920; rcor=416; rNcor=882; rlogoDP=1005; rNsEucl=375; rNSW=422; rank_mean=620.000; match_rank= a 0 340 409 432 439 352 247 203 161 343 491 600 600 567 0 78 229 305 c 0 78 38 23 26 46 73 81 121 70 13 0 0 0 0 89 11 160 g 0 76 80 97 89 132 202 156 203 110 20 0 0 33 600 57 278 42 t 0 106 73 48 46 70 78 160 115 77 76 0 0 0 0 376 82 93
DOF1.6_MA1275.2_JASPAR_shift9 (DOF1.6:MA1275.2:JASPAR)	0.751	0.601	7.801	0.871	0.867	769	347	60	968	958	620.400		; assembly_12 versus DOF1.6_MA1275.2_JASPAR (DOF1.6:MA1275.2:JASPAR); m=73/115; ncol2=8; w=0; offset=1; strand=D; shift=9; score= 620.4; ---------awAAAGTr- ; cor=0.751; Ncor=0.601; logoDP=7.801; NsEucl=0.871; NSW=0.867; rcor=769; rNcor=347; rlogoDP=60; rNsEucl=968; rNSW=958; rank_mean=620.400; match_rank= a 0 0 0 0 0 0 0 0 0 343 332 600 600 544 0 0 342 0 c 0 0 0 0 0 0 0 0 0 84 2 0 0 0 0 86 1 0 g 0 0 0 0 0 0 0 0 0 88 3 0 0 56 600 23 227 0 t 0 0 0 0 0 0 0 0 0 85 263 0 0 0 0 491 30 0
TAGL1_UN0426.1_JASPAR_shift5 (TAGL1:UN0426.1:JASPAR)	0.735	0.565	7.247	0.889	0.877	856	480	118	784	870	621.600		; assembly_12 versus TAGL1_UN0426.1_JASPAR (TAGL1:UN0426.1:JASPAR); m=74/115; ncol2=13; w=-3; offset=-3; strand=D; shift=5; score= 621.6; -----waagAAAAAGGaa ; cor=0.735; Ncor=0.565; logoDP=7.247; NsEucl=0.889; NSW=0.877; rcor=856; rNcor=480; rlogoDP=118; rNsEucl=784; rNSW=870; rank_mean=621.600; match_rank= a 0 0 0 0 0 2178 2082 2930 1091 4576 4641 4647 4590 4562 320 461 2263 2526 c 0 0 0 0 0 657 806 676 351 61 47 23 14 37 46 83 587 536 g 0 0 0 0 0 789 785 401 2722 106 85 83 109 85 4328 4129 893 797 t 0 0 0 0 0 1227 1178 844 687 108 78 98 138 167 157 178 1108 992
TRANSCRIPTION_1qn9_B_3D-footprint_shift7 (TRANSCRIPTION:1qn9_B:3D-footprint)	0.803	0.511	6.649	0.872	0.885	490	677	186	960	797	622.000		; assembly_12 versus TRANSCRIPTION_1qn9_B_3D-footprint (TRANSCRIPTION:1qn9_B:3D-footprint); m=75/115; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score= 622; -------TACAAaAG--- ; cor=0.803; Ncor=0.511; logoDP=6.649; NsEucl=0.872; NSW=0.885; rcor=490; rNcor=677; rlogoDP=186; rNsEucl=960; rNSW=797; rank_mean=622.000; match_rank= a 0 0 0 0 0 0 0 11 96 0 96 96 63 96 11 0 0 0 c 0 0 0 0 0 0 0 8 0 96 0 0 17 0 8 0 0 0 g 0 0 0 0 0 0 0 8 0 0 0 0 8 0 69 0 0 0 t 0 0 0 0 0 0 0 69 0 0 0 0 8 0 8 0 0 0
DOF2.4_MA0982.1_JASPAR_shift9 (DOF2.4:MA0982.1:JASPAR)	0.833	0.583	2.871	0.870	0.882	335	415	659	973	827	641.800		; assembly_12 versus DOF2.4_MA0982.1_JASPAR (DOF2.4:MA0982.1:JASPAR); m=76/115; ncol2=7; w=0; offset=1; strand=D; shift=9; score= 641.8; ---------awAAmGt-- ; cor=0.833; Ncor=0.583; logoDP=2.871; NsEucl=0.870; NSW=0.882; rcor=335; rNcor=415; rlogoDP=659; rNsEucl=973; rNSW=827; rank_mean=641.800; match_rank= a 0 0 0 0 0 0 0 0 0 381 426 807 815 658 81 177 0 0 c 0 0 0 0 0 0 0 0 0 171 90 71 66 252 73 242 0 0 g 0 0 0 0 0 0 0 0 0 233 127 18 1 16 762 210 0 0 t 0 0 0 0 0 0 0 0 0 215 356 104 118 75 84 371 0 0
ATDOF2.4_M0648_1.02_CISBP_shift9 (ATDOF2.4:M0648_1.02:CISBP)	0.831	0.582	2.871	0.870	0.881	345	419	661	975	833	646.600		; assembly_12 versus ATDOF2.4_M0648_1.02_CISBP (ATDOF2.4:M0648_1.02:CISBP); m=77/115; ncol2=7; w=0; offset=1; strand=D; shift=9; score= 646.6; ---------awAAmGt-- ; cor=0.831; Ncor=0.582; logoDP=2.871; NsEucl=0.870; NSW=0.881; rcor=345; rNcor=419; rlogoDP=661; rNsEucl=975; rNSW=833; rank_mean=646.600; match_rank= a 0 0 0 0 0 0 0 0 0 38 42 81 81 66 9 18 0 0 c 0 0 0 0 0 0 0 0 0 17 9 7 7 25 7 24 0 0 g 0 0 0 0 0 0 0 0 0 23 13 2 0 1 76 21 0 0 t 0 0 0 0 0 0 0 0 0 22 36 10 12 8 8 37 0 0
dof43.ampDAP_M0253_AthalianaCistrome_rc_shift9 (dof43.ampDAP:M0253:AthalianaCistrome_rc)	0.770	0.462	5.983	0.891	0.893	671	847	232	760	723	646.600		; assembly_12 versus dof43.ampDAP_M0253_AthalianaCistrome_rc (dof43.ampDAP:M0253:AthalianaCistrome_rc); m=78/115; ncol2=14; w=0; offset=1; strand=R; shift=9; score= 646.6; ---------awAAAGwrg ; cor=0.770; Ncor=0.462; logoDP=5.983; NsEucl=0.891; NSW=0.893; rcor=671; rNcor=847; rlogoDP=232; rNsEucl=760; rNSW=723; rank_mean=646.600; match_rank= a 0 0 0 0 0 0 0 0 0 228 252 580 580 580 0 175 335 109 c 0 0 0 0 0 0 0 0 0 118 37 0 0 0 0 103 1 85 g 0 0 0 0 0 0 0 0 0 108 67 0 0 0 580 53 200 331 t 0 0 0 0 0 0 0 0 0 126 224 0 0 0 0 249 44 55
DOF4.7_MA2380.1_JASPAR_rc_shift9 (DOF4.7:MA2380.1:JASPAR_rc)	0.774	0.697	0.705	0.888	0.887	649	111	903	808	786	651.400		; assembly_12 versus DOF4.7_MA2380.1_JASPAR_rc (DOF4.7:MA2380.1:JASPAR_rc); m=79/115; ncol2=9; w=0; offset=1; strand=R; shift=9; score= 651.4; ---------AWAAAGTwa ; cor=0.774; Ncor=0.697; logoDP=0.705; NsEucl=0.888; NSW=0.887; rcor=649; rNcor=111; rlogoDP=903; rNsEucl=808; rNSW=786; rank_mean=651.400; match_rank= a 0 0 0 0 0 0 0 0 0 874 706 1000 1000 1000 0 33 385 577 c 0 0 0 0 0 0 0 0 0 38 0 0 0 0 0 76 58 58 g 0 0 0 0 0 0 0 0 0 40 0 0 0 0 1000 183 123 242 t 0 0 0 0 0 0 0 0 0 46 293 0 0 0 0 706 432 121
DOF2.5_MA0977.1_JASPAR_shift9 (DOF2.5:MA0977.1:JASPAR)	0.743	0.594	6.849	0.870	0.866	801	368	163	972	964	653.600		; assembly_12 versus DOF2.5_MA0977.1_JASPAR (DOF2.5:MA0977.1:JASPAR); m=80/115; ncol2=8; w=0; offset=1; strand=D; shift=9; score= 653.6; ---------AwAARGTg- ; cor=0.743; Ncor=0.594; logoDP=6.849; NsEucl=0.870; NSW=0.866; rcor=801; rNcor=368; rlogoDP=163; rNsEucl=972; rNSW=964; rank_mean=653.600; match_rank= a 0 0 0 0 0 0 0 0 0 756 598 990 986 744 4 8 238 0 c 0 0 0 0 0 0 0 0 0 26 1 1 1 1 1 198 44 0 g 0 0 0 0 0 0 0 0 0 182 12 4 8 254 977 65 557 0 t 0 0 0 0 0 0 0 0 0 36 389 5 6 1 18 729 160 0
dof24.DAP_M0252_AthalianaCistrome_rc_shift8 (dof24.DAP:M0252:AthalianaCistrome_rc)	0.789	0.526	0.528	0.902	0.904	562	612	940	559	601	654.800		; assembly_12 versus dof24.DAP_M0252_AthalianaCistrome_rc (dof24.DAP:M0252:AthalianaCistrome_rc); m=81/115; ncol2=15; w=0; offset=0; strand=R; shift=8; score= 654.8; --------mAAAAAGtwA ; cor=0.789; Ncor=0.526; logoDP=0.528; NsEucl=0.902; NSW=0.904; rcor=562; rNcor=612; rlogoDP=940; rNsEucl=559; rNSW=601; rank_mean=654.800; match_rank= a 0 0 0 0 0 0 0 0 156 503 460 600 600 594 0 24 262 435 c 0 0 0 0 0 0 0 0 173 26 0 0 0 0 0 82 20 16 g 0 0 0 0 0 0 0 0 148 44 0 0 0 6 600 119 135 131 t 0 0 0 0 0 0 0 0 123 27 140 0 0 0 0 375 183 18
fgenesh1_pg.C_Chr_08.0001000114_M0664_1.02_CISBP_shift8 (fgenesh1_pg.C_Chr_08.0001000114:M0664_1.02:CISBP)	0.819	0.655	1.429	0.871	0.868	405	181	793	966	950	659.000		; assembly_12 versus fgenesh1_pg.C_Chr_08.0001000114_M0664_1.02_CISBP (fgenesh1_pg.C_Chr_08.0001000114:M0664_1.02:CISBP); m=82/115; ncol2=8; w=0; offset=0; strand=D; shift=8; score= 659; --------sawaamGt-- ; cor=0.819; Ncor=0.655; logoDP=1.429; NsEucl=0.871; NSW=0.868; rcor=405; rNcor=181; rlogoDP=793; rNsEucl=966; rNSW=950; rank_mean=659.000; match_rank= a 0 0 0 0 0 0 0 0 24 36 41 62 65 55 13 17 0 0 c 0 0 0 0 0 0 0 0 26 19 15 13 11 29 10 24 0 0 g 0 0 0 0 0 0 0 0 27 23 15 9 7 0 70 21 0 0 t 0 0 0 0 0 0 0 0 23 22 29 16 17 16 7 38 0 0
AT3G45610_MA1270.1_JASPAR_rc_shift0 (AT3G45610:MA1270.1:JASPAR_rc)	0.812	0.427	0.251	0.909	0.916	443	965	1036	415	459	663.600		; assembly_12 versus AT3G45610_MA1270.1_JASPAR_rc (AT3G45610:MA1270.1:JASPAR_rc); m=83/115; ncol2=19; w=-8; offset=-8; strand=R; shift=0; score= 663.6; aaaaaarrsAAAAAGtwr ; cor=0.812; Ncor=0.427; logoDP=0.251; NsEucl=0.909; NSW=0.916; rcor=443; rNcor=965; rlogoDP=1036; rNsEucl=415; rNSW=459; rank_mean=663.600; match_rank= a 274 288 327 328 397 363 267 153 120 496 465 600 599 600 0 58 285 323 c 115 88 55 48 59 56 57 107 176 10 0 0 1 0 0 85 27 51 g 134 92 92 120 55 98 189 211 175 55 0 0 0 0 600 138 111 151 t 77 132 126 104 89 83 87 129 129 39 135 0 0 0 0 319 177 75
ADOF2_M0649_1.02_CISBP_shift8 (ADOF2:M0649_1.02:CISBP)	0.783	0.626	2.568	0.875	0.876	595	262	710	942	887	679.200		; assembly_12 versus ADOF2_M0649_1.02_CISBP (ADOF2:M0649_1.02:CISBP); m=84/115; ncol2=8; w=0; offset=0; strand=D; shift=8; score= 679.2; --------srwAAmGy-- ; cor=0.783; Ncor=0.626; logoDP=2.568; NsEucl=0.875; NSW=0.876; rcor=595; rNcor=262; rlogoDP=710; rNsEucl=942; rNSW=887; rank_mean=679.200; match_rank= a 0 0 0 0 0 0 0 0 24 31 35 81 80 50 11 20 0 0 c 0 0 0 0 0 0 0 0 26 20 14 7 9 40 3 25 0 0 g 0 0 0 0 0 0 0 0 27 25 17 4 2 2 78 21 0 0 t 0 0 0 0 0 0 0 0 23 24 34 8 9 8 8 34 0 0
AT5G02460.ampDAP_M0258_AthalianaCistrome_rc_shift2 (AT5G02460.ampDAP:M0258:AthalianaCistrome_rc)	0.801	0.422	0.369	0.905	0.911	501	1001	970	479	519	694.000		; assembly_12 versus AT5G02460.ampDAP_M0258_AthalianaCistrome_rc (AT5G02460.ampDAP:M0258:AthalianaCistrome_rc); m=85/115; ncol2=19; w=-6; offset=-6; strand=R; shift=2; score= 694; --wwaaaamAWAAAGtwa ; cor=0.801; Ncor=0.422; logoDP=0.369; NsEucl=0.905; NSW=0.911; rcor=501; rNcor=1001; rlogoDP=970; rNsEucl=479; rNSW=519; rank_mean=694.000; match_rank= a 0 0 265 257 277 279 244 239 206 472 432 600 600 598 0 21 288 401 c 0 0 77 66 82 96 72 131 168 41 12 0 0 0 0 98 28 18 g 0 0 80 114 111 100 146 106 126 52 1 0 0 2 600 84 105 123 t 0 0 178 163 130 125 138 124 100 35 155 0 0 0 0 397 179 58
RIN_EEAD0575_EEADannot_shift6 (RIN:EEAD0575:EEADannot)	0.755	0.503	9.645	0.864	0.853	745	705	2	1003	1032	697.400		; assembly_12 versus RIN_EEAD0575_EEADannot (RIN:EEAD0575:EEADannot); m=86/115; ncol2=10; w=-2; offset=-2; strand=D; shift=6; score= 697.4; ------mmyAAAAAGr-- ; cor=0.755; Ncor=0.503; logoDP=9.645; NsEucl=0.864; NSW=0.853; rcor=745; rNcor=705; rlogoDP=2; rNsEucl=1003; rNSW=1032; rank_mean=697.400; match_rank= a 0 0 0 0 0 0 1 1 0 2 2 2 2 2 0 1 0 0 c 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 t 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
DOF3.5_MA1276.2_JASPAR_shift9 (DOF3.5:MA1276.2:JASPAR)	0.753	0.527	8.278	0.853	0.850	761	607	36	1050	1039	698.600		; assembly_12 versus DOF3.5_MA1276.2_JASPAR (DOF3.5:MA1276.2:JASPAR); m=87/115; ncol2=7; w=0; offset=1; strand=D; shift=9; score= 698.6; ---------AwAAAGk-- ; cor=0.753; Ncor=0.527; logoDP=8.278; NsEucl=0.853; NSW=0.850; rcor=761; rNcor=607; rlogoDP=36; rNsEucl=1050; rNSW=1039; rank_mean=698.600; match_rank= a 0 0 0 0 0 0 0 0 0 467 348 599 599 599 0 2 0 0 c 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 6 0 0 g 0 0 0 0 0 0 0 0 0 103 0 0 0 0 599 219 0 0 t 0 0 0 0 0 0 0 0 0 25 251 0 0 0 0 372 0 0
TATA-box-binding_6ueq_B_3D-footprint_rc_shift7 (TATA-box-binding:6ueq_B:3D-footprint_rc)	0.814	0.518	2.028	0.875	0.891	427	652	743	943	746	702.200		; assembly_12 versus TATA-box-binding_6ueq_B_3D-footprint_rc (TATA-box-binding:6ueq_B:3D-footprint_rc); m=88/115; ncol2=8; w=-1; offset=-1; strand=R; shift=7; score= 702.2; -------tATAAaAG--- ; cor=0.814; Ncor=0.518; logoDP=2.028; NsEucl=0.875; NSW=0.891; rcor=427; rNcor=652; rlogoDP=743; rNsEucl=943; rNSW=746; rank_mean=702.200; match_rank= a 0 0 0 0 0 0 0 10 96 0 96 85 64 96 1 0 0 0 c 0 0 0 0 0 0 0 12 0 0 0 10 10 0 10 0 0 0 g 0 0 0 0 0 0 0 10 0 0 0 0 10 0 85 0 0 0 t 0 0 0 0 0 0 0 64 0 96 0 1 12 0 0 0 0 0
TATA-box-binding_6ueo_G_3D-footprint_shift7 (TATA-box-binding:6ueo_G:3D-footprint)	0.777	0.495	5.175	0.868	0.879	630	732	350	976	849	707.400		; assembly_12 versus TATA-box-binding_6ueo_G_3D-footprint (TATA-box-binding:6ueo_G:3D-footprint); m=89/115; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score= 707.4; -------TATAAAAG--- ; cor=0.777; Ncor=0.495; logoDP=5.175; NsEucl=0.868; NSW=0.879; rcor=630; rNcor=732; rlogoDP=350; rNsEucl=976; rNSW=849; rank_mean=707.400; match_rank= a 0 0 0 0 0 0 0 0 96 0 96 96 67 67 11 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 11 9 9 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 9 11 67 0 0 0 t 0 0 0 0 0 0 0 96 0 96 0 0 9 9 9 0 0 0
TRANSCRIPTION_1qna_B_3D-footprint_rc_shift7 (TRANSCRIPTION:1qna_B:3D-footprint_rc)	0.798	0.508	3.313	0.873	0.887	510	696	603	953	783	709.000		; assembly_12 versus TRANSCRIPTION_1qna_B_3D-footprint_rc (TRANSCRIPTION:1qna_B:3D-footprint_rc); m=90/115; ncol2=8; w=-1; offset=-1; strand=R; shift=7; score= 709; -------TTTAAaAg--- ; cor=0.798; Ncor=0.508; logoDP=3.313; NsEucl=0.873; NSW=0.887; rcor=510; rNcor=696; rlogoDP=603; rNsEucl=953; rNSW=783; rank_mean=709.000; match_rank= a 0 0 0 0 0 0 0 1 0 10 96 96 64 96 12 0 0 0 c 0 0 0 0 0 0 0 10 0 1 0 0 10 0 10 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 12 0 64 0 0 0 t 0 0 0 0 0 0 0 85 96 85 0 0 10 0 10 0 0 0
TATA_1vto_B_3D-footprint_shift7 (TATA:1vto_B:3D-footprint)	0.770	0.490	6.202	0.864	0.871	666	751	218	1004	927	713.200		; assembly_12 versus TATA_1vto_B_3D-footprint (TATA:1vto_B:3D-footprint); m=91/115; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score= 713.2; -------TATAAaAg--- ; cor=0.770; Ncor=0.490; logoDP=6.202; NsEucl=0.864; NSW=0.871; rcor=666; rNcor=751; rlogoDP=218; rNsEucl=1004; rNSW=927; rank_mean=713.200; match_rank= a 0 0 0 0 0 0 0 0 96 0 96 96 54 96 13 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 16 0 13 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 13 0 57 0 0 0 t 0 0 0 0 0 0 0 96 0 96 0 0 13 0 13 0 0 0
TAGL1_UN0426.2_JASPAR_shift7 (TAGL1:UN0426.2:JASPAR)	0.737	0.536	7.239	0.864	0.852	833	581	119	1006	1033	714.400		; assembly_12 versus TAGL1_UN0426.2_JASPAR (TAGL1:UN0426.2:JASPAR); m=92/115; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score= 714.4; -------agAAAAAGG-- ; cor=0.737; Ncor=0.536; logoDP=7.239; NsEucl=0.864; NSW=0.852; rcor=833; rNcor=581; rlogoDP=119; rNsEucl=1006; rNSW=1033; rank_mean=714.400; match_rank= a 0 0 0 0 0 0 0 2930 1091 4576 4641 4647 4590 4562 320 461 0 0 c 0 0 0 0 0 0 0 676 351 61 47 23 14 37 46 83 0 0 g 0 0 0 0 0 0 0 401 2722 106 85 83 109 85 4328 4129 0 0 t 0 0 0 0 0 0 0 844 687 108 78 98 138 167 157 178 0 0
TATA_1vtl_E_3D-footprint_shift7 (TATA:1vtl_E:3D-footprint)	0.769	0.489	6.390	0.863	0.869	675	759	204	1011	939	717.600		; assembly_12 versus TATA_1vtl_E_3D-footprint (TATA:1vtl_E:3D-footprint); m=93/115; ncol2=8; w=-1; offset=-1; strand=D; shift=7; score= 717.6; -------TATAAaAg--- ; cor=0.769; Ncor=0.489; logoDP=6.390; NsEucl=0.863; NSW=0.869; rcor=675; rNcor=759; rlogoDP=204; rNsEucl=1011; rNSW=939; rank_mean=717.600; match_rank= a 0 0 0 0 0 0 0 0 96 0 96 96 48 96 16 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 16 0 16 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 16 0 64 0 0 0 t 0 0 0 0 0 0 0 96 0 96 0 0 16 0 0 0 0 0
DOF1_PBF1_B73_2_m1_EEAD0325_EEADannot_rc_shift3 (DOF1_PBF1_B73_2_m1:EEAD0325:EEADannot_rc)	0.765	0.510	0.383	0.899	0.898	698	683	964	615	665	725.000		; assembly_12 versus DOF1_PBF1_B73_2_m1_EEAD0325_EEADannot_rc (DOF1_PBF1_B73_2_m1:EEAD0325:EEADannot_rc); m=94/115; ncol2=15; w=-5; offset=-5; strand=R; shift=3; score= 725; ---wacrsyrAAAAGTmA ; cor=0.765; Ncor=0.510; logoDP=0.383; NsEucl=0.899; NSW=0.898; rcor=698; rNcor=683; rlogoDP=964; rNsEucl=615; rNSW=665; rank_mean=725.000; match_rank= a 0 0 0 52 61 16 34 12 7 47 89 97 78 95 0 2 36 70 c 0 0 0 5 14 52 5 28 39 20 2 1 0 0 1 9 37 3 g 0 0 0 8 11 8 49 56 8 29 2 1 0 4 99 19 12 23 t 0 0 0 35 14 24 12 4 46 4 7 1 22 1 0 70 15 4
Zm00001d027846_MA1823.2_JASPAR_shift6 (Zm00001d027846:MA1823.2:JASPAR)	0.801	0.400	4.583	0.867	0.894	502	1084	443	982	707	743.600		; assembly_12 versus Zm00001d027846_MA1823.2_JASPAR (Zm00001d027846:MA1823.2:JASPAR); m=95/115; ncol2=8; w=-2; offset=-2; strand=D; shift=6; score= 743.6; ------AAAGAAAA---- ; cor=0.801; Ncor=0.400; logoDP=4.583; NsEucl=0.867; NSW=0.894; rcor=502; rNcor=1084; rlogoDP=443; rNsEucl=982; rNSW=707; rank_mean=743.600; match_rank= a 0 0 0 0 0 0 818 893 929 23 896 915 914 752 0 0 0 0 c 0 0 0 0 0 0 46 17 6 24 29 11 27 53 0 0 0 0 g 0 0 0 0 0 0 86 44 30 866 38 28 33 123 0 0 0 0 t 0 0 0 0 0 0 37 33 22 74 24 33 13 59 0 0 0 0
At2g41835.DAP_M0332_AthalianaCistrome_shift7 (At2g41835.DAP:M0332:AthalianaCistrome)	0.782	0.427	7.294	0.846	0.857	602	971	110	1076	1014	754.600		; assembly_12 versus At2g41835.DAP_M0332_AthalianaCistrome (At2g41835.DAP:M0332:AthalianaCistrome); m=96/115; ncol2=7; w=-1; offset=-1; strand=D; shift=7; score= 754.6; -------TTGAAAA---- ; cor=0.782; Ncor=0.427; logoDP=7.294; NsEucl=0.846; NSW=0.857; rcor=602; rNcor=971; rlogoDP=110; rNsEucl=1076; rNSW=1014; rank_mean=754.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 192 180 192 192 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 192 0 12 0 0 0 0 0 0 t 0 0 0 0 0 0 0 192 192 0 0 0 0 0 0 0 0 0
ONAC127_UN0430.1_JASPAR_shift5 (ONAC127:UN0430.1:JASPAR)	0.723	0.501	5.493	0.879	0.867	916	711	297	903	955	756.400		; assembly_12 versus ONAC127_UN0430.1_JASPAR (ONAC127:UN0430.1:JASPAR); m=97/115; ncol2=12; w=-3; offset=-3; strand=D; shift=5; score= 756.4; -----dgAAGAAAAGgr- ; cor=0.723; Ncor=0.501; logoDP=5.493; NsEucl=0.879; NSW=0.867; rcor=916; rNcor=711; rlogoDP=297; rNsEucl=903; rNSW=955; rank_mean=756.400; match_rank= a 0 0 0 0 0 20 16 65 67 4 57 61 63 58 3 16 25 0 c 0 0 0 0 0 8 16 0 0 0 2 5 0 1 7 14 9 0 g 0 0 0 0 0 20 22 0 0 62 7 1 5 3 56 30 19 0 t 0 0 0 0 0 20 14 3 1 2 2 1 0 6 2 8 15 0
HvNAC013_1_EEAD0563_EEADannot_shift9 (HvNAC013_1:EEAD0563:EEADannot)	0.701	0.526	7.806	0.868	0.843	1085	614	58	979	1055	758.200		; assembly_12 versus HvNAC013_1_EEAD0563_EEADannot (HvNAC013_1:EEAD0563:EEADannot); m=98/115; ncol2=11; w=0; offset=1; strand=D; shift=9; score= 758.2; ----------rmAAGCAA ; cor=0.701; Ncor=0.526; logoDP=7.806; NsEucl=0.868; NSW=0.843; rcor=1085; rNcor=614; rlogoDP=58; rNsEucl=979; rNSW=1055; rank_mean=758.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 2121 1747 6767 6767 0 0 6767 6767 c 0 0 0 0 0 0 0 0 0 0 1208 2484 0 0 0 6767 0 0 g 0 0 0 0 0 0 0 0 0 0 2059 1549 0 0 6767 0 0 0 t 0 0 0 0 0 0 0 0 0 0 1379 987 0 0 0 0 0 0
NAC007_MA2044.2_JASPAR_shift11 (NAC007:MA2044.2:JASPAR)	0.736	0.515	6.287	0.855	0.852	848	663	211	1047	1034	760.600		; assembly_12 versus NAC007_MA2044.2_JASPAR (NAC007:MA2044.2:JASPAR); m=99/115; ncol2=7; w=0; offset=3; strand=D; shift=11; score= 760.6; -----------cAAGCAA ; cor=0.736; Ncor=0.515; logoDP=6.287; NsEucl=0.855; NSW=0.852; rcor=848; rNcor=663; rlogoDP=211; rNsEucl=1047; rNSW=1034; rank_mean=760.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 285 2117 1962 4 3 1974 2067 c 0 0 0 0 0 0 0 0 0 0 0 1236 13 161 7 2037 60 15 g 0 0 0 0 0 0 0 0 0 0 0 361 19 11 2144 9 40 13 t 0 0 0 0 0 0 0 0 0 0 0 291 24 39 18 124 99 78
NAC076_MA2036.2_JASPAR_shift11 (NAC076:MA2036.2:JASPAR)	0.734	0.514	6.271	0.854	0.851	863	669	215	1048	1036	766.200		; assembly_12 versus NAC076_MA2036.2_JASPAR (NAC076:MA2036.2:JASPAR); m=100/115; ncol2=7; w=0; offset=3; strand=D; shift=11; score= 766.2; -----------cAAGCAA ; cor=0.734; Ncor=0.514; logoDP=6.271; NsEucl=0.854; NSW=0.851; rcor=863; rNcor=669; rlogoDP=215; rNsEucl=1048; rNSW=1036; rank_mean=766.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 408 3171 2963 7 16 2965 3088 c 0 0 0 0 0 0 0 0 0 0 0 1879 22 216 18 3023 81 19 g 0 0 0 0 0 0 0 0 0 0 0 539 20 16 3193 23 55 17 t 0 0 0 0 0 0 0 0 0 0 0 421 34 52 29 185 146 123
SMB_MA2010.2_JASPAR_shift11 (SMB:MA2010.2:JASPAR)	0.730	0.511	6.062	0.854	0.850	883	678	227	1049	1038	775.000		; assembly_12 versus SMB_MA2010.2_JASPAR (SMB:MA2010.2:JASPAR); m=101/115; ncol2=7; w=0; offset=3; strand=D; shift=11; score= 775; -----------cAAGCAA ; cor=0.730; Ncor=0.511; logoDP=6.062; NsEucl=0.854; NSW=0.850; rcor=883; rNcor=678; rlogoDP=227; rNsEucl=1049; rNSW=1038; rank_mean=775.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 418 3480 3246 6 8 3245 3387 c 0 0 0 0 0 0 0 0 0 0 0 2165 45 251 21 3329 115 33 g 0 0 0 0 0 0 0 0 0 0 0 553 35 25 3530 33 64 29 t 0 0 0 0 0 0 0 0 0 0 0 466 42 80 45 232 178 153
COG1.ampDAP_M0276_AthalianaCistrome_rc_shift8 (COG1.ampDAP:M0276:AthalianaCistrome_rc)	0.752	0.501	0.560	0.894	0.887	766	709	932	717	787	782.200		; assembly_12 versus COG1.ampDAP_M0276_AthalianaCistrome_rc (COG1.ampDAP:M0276:AthalianaCistrome_rc); m=102/115; ncol2=15; w=0; offset=0; strand=R; shift=8; score= 782.2; --------vAAAAAGTrm ; cor=0.752; Ncor=0.501; logoDP=0.560; NsEucl=0.894; NSW=0.887; rcor=766; rNcor=709; rlogoDP=932; rNsEucl=717; rNSW=787; rank_mean=782.200; match_rank= a 0 0 0 0 0 0 0 0 171 496 454 595 595 595 0 25 190 301 c 0 0 0 0 0 0 0 0 155 21 0 0 0 0 0 46 1 163 g 0 0 0 0 0 0 0 0 156 35 0 0 0 0 595 82 347 13 t 0 0 0 0 0 0 0 0 113 43 141 0 0 0 0 442 57 118
DOF4.7_M0652_1.02_CISBP_shift7 (DOF4.7:M0652_1.02:CISBP)	0.763	0.555	2.051	0.870	0.865	708	521	742	974	970	783.000		; assembly_12 versus DOF4.7_M0652_1.02_CISBP (DOF4.7:M0652_1.02:CISBP); m=103/115; ncol2=9; w=-1; offset=-1; strand=D; shift=7; score= 783; -------hrawAAmGt-- ; cor=0.763; Ncor=0.555; logoDP=2.051; NsEucl=0.870; NSW=0.865; rcor=708; rNcor=521; rlogoDP=742; rNsEucl=974; rNSW=970; rank_mean=783.000; match_rank= a 0 0 0 0 0 0 0 26 25 37 37 79 74 46 14 19 0 0 c 0 0 0 0 0 0 0 25 23 17 12 6 10 39 4 23 0 0 g 0 0 0 0 0 0 0 24 29 22 13 3 4 6 71 18 0 0 t 0 0 0 0 0 0 0 25 23 24 38 12 12 9 11 40 0 0
NFYB4.DAP_M0353_AthalianaCistrome_shift8 (NFYB4.DAP:M0353:AthalianaCistrome)	0.707	0.495	7.723	0.842	0.824	1046	730	68	1079	1078	800.200		; assembly_12 versus NFYB4.DAP_M0353_AthalianaCistrome (NFYB4.DAP:M0353:AthalianaCistrome); m=104/115; ncol2=7; w=0; offset=0; strand=D; shift=8; score= 800.2; --------TGAAAAs--- ; cor=0.707; Ncor=0.495; logoDP=7.723; NsEucl=0.842; NSW=0.824; rcor=1046; rNcor=730; rlogoDP=68; rNsEucl=1079; rNSW=1078; rank_mean=800.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 95 95 95 95 22 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 g 0 0 0 0 0 0 0 0 0 95 0 0 0 0 24 0 0 0 t 0 0 0 0 0 0 0 0 95 0 0 0 0 0 19 0 0 0
TRANSCRIPTION_1qne_B_3D-footprint_rc_shift7 (TRANSCRIPTION:1qne_B:3D-footprint_rc)	0.770	0.490	1.945	0.864	0.871	666	751	751	1004	927	819.800		; assembly_12 versus TRANSCRIPTION_1qne_B_3D-footprint_rc (TRANSCRIPTION:1qne_B:3D-footprint_rc); m=105/115; ncol2=8; w=-1; offset=-1; strand=R; shift=7; score= 819.8; -------TATAAaAg--- ; cor=0.770; Ncor=0.490; logoDP=1.945; NsEucl=0.864; NSW=0.871; rcor=666; rNcor=751; rlogoDP=751; rNsEucl=1004; rNSW=927; rank_mean=819.800; match_rank= a 0 0 0 0 0 0 0 0 96 0 96 96 54 96 13 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 13 0 13 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 13 0 57 0 0 0 t 0 0 0 0 0 0 0 96 0 96 0 0 16 0 13 0 0 0
AT5G47660_MA1365.3_JASPAR_shift7 (AT5G47660:MA1365.3:JASPAR)	0.757	0.413	5.829	0.844	0.853	729	1024	250	1078	1031	822.400		; assembly_12 versus AT5G47660_MA1365.3_JASPAR (AT5G47660:MA1365.3:JASPAR); m=106/115; ncol2=7; w=-1; offset=-1; strand=D; shift=7; score= 822.4; -------GGTAAAA---- ; cor=0.757; Ncor=0.413; logoDP=5.829; NsEucl=0.844; NSW=0.853; rcor=729; rNcor=1024; rlogoDP=250; rNsEucl=1078; rNSW=1031; rank_mean=822.400; match_rank= a 0 0 0 0 0 0 0 549 0 0 5302 5236 4920 4790 0 0 0 0 c 0 0 0 0 0 0 0 76 0 14 30 8 23 1 0 0 0 0 g 0 0 0 0 0 0 0 4639 5429 0 38 50 104 34 0 0 0 0 t 0 0 0 0 0 0 0 165 0 5415 59 135 382 604 0 0 0 0
NAC101_MA2050.2_JASPAR_shift11 (NAC101:MA2050.2:JASPAR)	0.709	0.496	5.860	0.847	0.836	1034	725	245	1067	1064	827.000		; assembly_12 versus NAC101_MA2050.2_JASPAR (NAC101:MA2050.2:JASPAR); m=107/115; ncol2=7; w=0; offset=3; strand=D; shift=11; score= 827; -----------CAAGCAA ; cor=0.709; Ncor=0.496; logoDP=5.860; NsEucl=0.847; NSW=0.836; rcor=1034; rNcor=725; rlogoDP=245; rNsEucl=1067; rNSW=1064; rank_mean=827.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 248 2593 2461 32 82 2449 2513 c 0 0 0 0 0 0 0 0 0 0 0 1815 11 145 35 2318 56 14 g 0 0 0 0 0 0 0 0 0 0 0 253 17 7 2538 57 42 14 t 0 0 0 0 0 0 0 0 0 0 0 333 28 36 44 192 102 108
PROTEIN_1vol_AB_3D-footprint_rc_shift7 (PROTEIN:1vol_AB:3D-footprint_rc)	0.769	0.489	1.944	0.863	0.869	675	759	752	1011	939	827.200		; assembly_12 versus PROTEIN_1vol_AB_3D-footprint_rc (PROTEIN:1vol_AB:3D-footprint_rc); m=108/115; ncol2=8; w=-1; offset=-1; strand=R; shift=7; score= 827.2; -------TATAAaAg--- ; cor=0.769; Ncor=0.489; logoDP=1.944; NsEucl=0.863; NSW=0.869; rcor=675; rNcor=759; rlogoDP=752; rNsEucl=1011; rNSW=939; rank_mean=827.200; match_rank= a 0 0 0 0 0 0 0 0 96 0 96 96 48 96 16 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 16 0 16 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 16 0 64 0 0 0 t 0 0 0 0 0 0 0 96 0 96 0 0 16 0 0 0 0 0
SAP11_UN0835.1_JASPAR_rc_shift7 (SAP11:UN0835.1:JASPAR_rc)	0.782	0.427	3.879	0.846	0.857	602	971	533	1076	1014	839.200		; assembly_12 versus SAP11_UN0835.1_JASPAR_rc (SAP11:UN0835.1:JASPAR_rc); m=109/115; ncol2=7; w=-1; offset=-1; strand=R; shift=7; score= 839.2; -------TTGAAAA---- ; cor=0.782; Ncor=0.427; logoDP=3.879; NsEucl=0.846; NSW=0.857; rcor=602; rNcor=971; rlogoDP=533; rNsEucl=1076; rNSW=1014; rank_mean=839.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 1000 937.5 1000 1000 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 1000 0 62.5 0 0 0 0 0 0 t 0 0 0 0 0 0 0 1000 1000 0 0 0 0 0 0 0 0 0
AT5G25475.DAP_M0007_AthalianaCistrome_shift11 (AT5G25475.DAP:M0007:AthalianaCistrome)	0.706	0.424	7.746	0.818	0.800	1048	985	65	1089	1089	855.200		; assembly_12 versus AT5G25475.DAP_M0007_AthalianaCistrome (AT5G25475.DAP:M0007:AthalianaCistrome); m=110/115; ncol2=6; w=0; offset=3; strand=D; shift=11; score= 855.2; -----------CAAGCA- ; cor=0.706; Ncor=0.424; logoDP=7.746; NsEucl=0.818; NSW=0.800; rcor=1048; rNcor=985; rlogoDP=65; rNsEucl=1089; rNSW=1089; rank_mean=855.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 218 218 0 0 218 0 c 0 0 0 0 0 0 0 0 0 0 0 196 0 0 0 218 0 0 g 0 0 0 0 0 0 0 0 0 0 0 22 0 0 218 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
NAC045_MA2048.2_JASPAR_shift11 (NAC045:MA2048.2:JASPAR)	0.705	0.449	5.838	0.847	0.835	1058	893	249	1070	1067	867.400		; assembly_12 versus NAC045_MA2048.2_JASPAR (NAC045:MA2048.2:JASPAR); m=111/115; ncol2=8; w=0; offset=3; strand=D; shift=11; score= 867.4; -----------sAAGCAA ; cor=0.705; Ncor=0.449; logoDP=5.838; NsEucl=0.847; NSW=0.835; rcor=1058; rNcor=893; rlogoDP=249; rNsEucl=1070; rNSW=1067; rank_mean=867.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 112 1389 1327 23 84 1328 1352 c 0 0 0 0 0 0 0 0 0 0 0 367 4 52 11 1158 17 3 g 0 0 0 0 0 0 0 0 0 0 0 814 5 16 1354 41 11 10 t 0 0 0 0 0 0 0 0 0 0 0 111 6 9 16 121 48 39
NAC105_MA2053.2_JASPAR_shift11 (NAC105:MA2053.2:JASPAR)	0.712	0.415	5.842	0.849	0.839	999	1016	248	1063	1060	877.200		; assembly_12 versus NAC105_MA2053.2_JASPAR (NAC105:MA2053.2:JASPAR); m=112/115; ncol2=9; w=0; offset=3; strand=D; shift=11; score= 877.2; -----------cAAGCAA ; cor=0.712; Ncor=0.415; logoDP=5.842; NsEucl=0.849; NSW=0.839; rcor=999; rNcor=1016; rlogoDP=248; rNsEucl=1063; rNSW=1060; rank_mean=877.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 128 1178 1122 9 73 1136 1172 c 0 0 0 0 0 0 0 0 0 0 0 680 10 69 12 990 20 4 g 0 0 0 0 0 0 0 0 0 0 0 214 5 3 1176 37 14 2 t 0 0 0 0 0 0 0 0 0 0 0 179 8 7 4 101 31 23
TRANSCRIPTION_1qnc_B_3D-footprint_rc_shift7 (TRANSCRIPTION:1qnc_B:3D-footprint_rc)	0.738	0.470	1.944	0.856	0.854	825	826	753	1042	1027	894.600		; assembly_12 versus TRANSCRIPTION_1qnc_B_3D-footprint_rc (TRANSCRIPTION:1qnc_B:3D-footprint_rc); m=113/115; ncol2=8; w=-1; offset=-1; strand=R; shift=7; score= 894.6; -------AATAAmAs--- ; cor=0.738; Ncor=0.470; logoDP=1.944; NsEucl=0.856; NSW=0.854; rcor=825; rNcor=826; rlogoDP=753; rNsEucl=1042; rNSW=1027; rank_mean=894.600; match_rank= a 0 0 0 0 0 0 0 96 96 0 96 96 43 96 13 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 27 0 27 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 13 0 54 0 0 0 t 0 0 0 0 0 0 0 0 0 96 0 0 13 0 2 0 0 0
ATGRP2B_M0583_1.02_CISBP_rc_shift7 (ATGRP2B:M0583_1.02:CISBP_rc)	0.714	0.454	0.737	0.846	0.835	984	872	901	1072	1069	979.600		; assembly_12 versus ATGRP2B_M0583_1.02_CISBP_rc (ATGRP2B:M0583_1.02:CISBP_rc); m=114/115; ncol2=8; w=-1; offset=-1; strand=R; shift=7; score= 979.6; -------AAwAAAAm--- ; cor=0.714; Ncor=0.454; logoDP=0.737; NsEucl=0.846; NSW=0.835; rcor=984; rNcor=872; rlogoDP=901; rNsEucl=1072; rNSW=1069; rank_mean=979.600; match_rank= a 0 0 0 0 0 0 0 99 99 34 99 99 100 99 66 0 0 0 c 0 0 0 0 0 0 0 1 1 0 1 1 0 1 33 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 66 0 0 0 0 1 0 0 0
AT5G25475_UN0848.1_JASPAR_rc_shift11 (AT5G25475:UN0848.1:JASPAR_rc)	0.706	0.424	0.012	0.818	0.800	1047	984	1088	1088	1088	1059.000		; assembly_12 versus AT5G25475_UN0848.1_JASPAR_rc (AT5G25475:UN0848.1:JASPAR_rc); m=115/115; ncol2=6; w=0; offset=3; strand=R; shift=11; score= 1059; -----------CAAGCA- ; cor=0.706; Ncor=0.424; logoDP=0.012; NsEucl=0.818; NSW=0.800; rcor=1047; rNcor=984; rlogoDP=1088; rNsEucl=1088; rNSW=1088; rank_mean=1059.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 1000 1000 0 0 1000 0 c 0 0 0 0 0 0 0 0 0 0 0 899 0 0 0 1000 0 0 g 0 0 0 0 0 0 0 0 0 0 0 101 0 0 1000 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

One-to-n matrix alignment; reference matrix: assembly_13_shift9 ; 230 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
assembly_13_shift9 (assembly_13)
; assembly_13; m=0 (reference); ncol1=11; shift=9; ncol=20; ---------hrACGGCGGhd ; Alignment reference a 0 0 0 0 0 0 0 0 0 149 169 362 20 11 32 20 21 29 134 108 c 0 0 0 0 0 0 0 0 0 109 66 18 354 12 15 360 7 12 112 67 g 0 0 0 0 0 0 0 0 0 52 108 31 10 387 357 5 384 349 66 134 t 0 0 0 0 0 0 0 0 0 112 79 11 38 12 18 37 10 32 110 113

ERF8_MA0994.3_JASPAR_shift9 (ERF8:MA0994.3:JASPAR) 0.866 0.866 5.091 0.926 0.940 202 4 367 154 191 183.600
; assembly_13 versus ERF8_MA0994.3_JASPAR (ERF8:MA0994.3:JASPAR); m=1/229; ncol2=11; w=0; offset=0; strand=D; shift=9; score= 183.6; ---------tgrCGGCGGCG ; cor=0.866; Ncor=0.866; logoDP=5.091; NsEucl=0.926; NSW=0.940; rcor=202; rNcor=4; rlogoDP=367; rNsEucl=154; rNSW=191; rank_mean=183.600; match_rank= a 0 0 0 0 0 0 0 0 0 116 103 426 32 3 16 11 6 16 108 21 c 0 0 0 0 0 0 0 0 0 180 50 29 649 3 9 701 2 46 537 9 g 0 0 0 0 0 0 0 0 0 33 491 252 5 728 714 0 728 667 11 674 t 0 0 0 0 0 0 0 0 0 414 99 36 57 9 4 31 7 14 87 39

ERF087_MA1247.2_JASPAR_shift10 (ERF087:MA1247.2:JASPAR) 0.866 0.787 5.750 0.919 0.935 201 24 260 236 239 192.000
; assembly_13 versus ERF087_MA1247.2_JASPAR (ERF087:MA1247.2:JASPAR); m=2/229; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 192; ----------grCGGCGGmG ; cor=0.866; Ncor=0.787; logoDP=5.750; NsEucl=0.919; NSW=0.935; rcor=201; rNcor=24; rlogoDP=260; rNsEucl=236; rNSW=239; rank_mean=192.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 97 212 8 0 6 0 0 15 200 42 c 0 0 0 0 0 0 0 0 0 0 38 11 577 0 1 586 0 55 314 15 g 0 0 0 0 0 0 0 0 0 0 374 366 0 595 586 0 594 511 11 485 t 0 0 0 0 0 0 0 0 0 0 86 6 10 0 2 9 1 14 70 53

JUB1_MA2017.1_JASPAR_shift8 (JUB1:MA2017.1:JASPAR) 0.858 0.674 4.820 0.932 0.949 232 143 418 117 134 208.800
; assembly_13 versus JUB1_MA2017.1_JASPAR (JUB1:MA2017.1:JASPAR); m=3/229; ncol2=14; w=-1; offset=-1; strand=D; shift=8; score= 208.8; --------dycACGGCGagt ; cor=0.858; Ncor=0.674; logoDP=4.820; NsEucl=0.932; NSW=0.949; rcor=232; rNcor=143; rlogoDP=418; rNsEucl=117; rNSW=134; rank_mean=208.800; match_rank= a 0 0 0 0 0 0 0 0 151 113 96 458 9 9 3 12 33 288 68 67 c 0 0 0 0 0 0 0 0 79 153 236 30 492 8 12 476 10 36 122 47 g 0 0 0 0 0 0 0 0 132 65 115 10 0 489 492 0 457 82 196 121 t 0 0 0 0 0 0 0 0 147 178 62 11 8 3 2 21 9 103 123 274

AT1G28160_MA1247.1_JASPAR_shift9 (AT1G28160:MA1247.1:JASPAR) 0.862 0.632 5.753 0.925 0.939 218 234 259 163 203 215.400
; assembly_13 versus AT1G28160_MA1247.1_JASPAR (AT1G28160:MA1247.1:JASPAR); m=4/229; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 215.4; ---------ygrCGGCGGmG ; cor=0.862; Ncor=0.632; logoDP=5.753; NsEucl=0.925; NSW=0.939; rcor=218; rNcor=234; rlogoDP=259; rNsEucl=163; rNSW=203; rank_mean=215.400; match_rank= a 0 0 0 0 0 0 0 0 0 129 97 212 8 0 6 0 0 15 200 42 c 0 0 0 0 0 0 0 0 0 178 38 11 577 0 1 586 0 55 314 15 g 0 0 0 0 0 0 0 0 0 28 374 366 0 595 586 0 594 511 11 485 t 0 0 0 0 0 0 0 0 0 260 86 6 10 0 2 9 1 14 70 53

RRTF1.DAP_M0057_AthalianaCistrome_shift5 (RRTF1.DAP:M0057:AthalianaCistrome) 0.856 0.628 5.366 0.928 0.942 237 256 317 138 172 224.000
; assembly_13 versus RRTF1.DAP_M0057_AthalianaCistrome (RRTF1.DAP:M0057:AthalianaCistrome); m=5/229; ncol2=15; w=-4; offset=-4; strand=D; shift=5; score= 224; -----raaatkrCGGCGsmg ; cor=0.856; Ncor=0.628; logoDP=5.366; NsEucl=0.928; NSW=0.942; rcor=237; rNcor=256; rlogoDP=317; rNsEucl=138; rNSW=172; rank_mean=224.000; match_rank= a 0 0 0 0 0 185 252 277 386 147 105 219 1 0 0 1 1 22 172 85 c 0 0 0 0 0 99 109 49 6 42 5 31 595 0 0 599 1 166 312 42 g 0 0 0 0 0 233 100 132 101 5 236 315 0 598 600 0 565 389 39 390 t 0 0 0 0 0 83 139 142 107 406 254 35 4 2 0 0 33 23 77 83

ERF3.DAP_M0069_AthalianaCistrome_shift9 (ERF3.DAP:M0069:AthalianaCistrome) 0.859 0.630 5.322 0.926 0.939 224 243 327 158 196 229.600
; assembly_13 versus ERF3.DAP_M0069_AthalianaCistrome (ERF3.DAP:M0069:AthalianaCistrome); m=6/229; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 229.6; ---------ygrCGGCGGmG ; cor=0.859; Ncor=0.630; logoDP=5.322; NsEucl=0.926; NSW=0.939; rcor=224; rNcor=243; rlogoDP=327; rNsEucl=158; rNSW=196; rank_mean=229.600; match_rank= a 0 0 0 0 0 0 0 0 0 125 104 238 8 0 4 0 1 27 185 35 c 0 0 0 0 0 0 0 0 0 150 17 2 569 0 9 560 0 60 333 18 g 0 0 0 0 0 0 0 0 0 15 370 346 0 596 582 0 568 503 9 502 t 0 0 0 0 0 0 0 0 0 306 105 10 19 0 1 36 27 6 69 41

RAP26_MA1221.1_JASPAR_shift9 (RAP26:MA1221.1:JASPAR) 0.850 0.624 5.387 0.924 0.937 259 270 312 172 218 246.200
; assembly_13 versus RAP26_MA1221.1_JASPAR (RAP26:MA1221.1:JASPAR); m=7/229; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 246.2; ---------tkrCGGCGGmG ; cor=0.850; Ncor=0.624; logoDP=5.387; NsEucl=0.924; NSW=0.937; rcor=259; rNcor=270; rlogoDP=312; rNsEucl=172; rNSW=218; rank_mean=246.200; match_rank= a 0 0 0 0 0 0 0 0 0 103 64 187 1 0 1 8 0 15 197 67 c 0 0 0 0 0 0 0 0 0 139 22 11 574 0 15 567 3 60 310 9 g 0 0 0 0 0 0 0 0 0 18 326 381 0 597 581 0 579 511 14 454 t 0 0 0 0 0 0 0 0 0 337 185 18 22 0 0 22 15 11 76 67

ESE3.ampDAP_M0061_AthalianaCistrome_shift8 (ESE3.ampDAP:M0061:AthalianaCistrome) 0.848 0.622 5.160 0.926 0.939 271 274 355 157 195 250.400
; assembly_13 versus ESE3.ampDAP_M0061_AthalianaCistrome (ESE3.ampDAP:M0061:AthalianaCistrome); m=8/229; ncol2=15; w=-1; offset=-1; strand=D; shift=8; score= 250.4; --------kygrCGGCGGmG ; cor=0.848; Ncor=0.622; logoDP=5.160; NsEucl=0.926; NSW=0.939; rcor=271; rNcor=274; rlogoDP=355; rNsEucl=157; rNSW=195; rank_mean=250.400; match_rank= a 0 0 0 0 0 0 0 0 132 133 135 156 0 0 3 5 0 9 250 65 c 0 0 0 0 0 0 0 0 35 158 14 25 583 0 2 455 0 63 251 11 g 0 0 0 0 0 0 0 0 276 38 320 366 0 597 595 0 593 517 8 485 t 0 0 0 0 0 0 0 0 157 271 131 53 17 3 0 140 7 11 91 39

ABR1_MA1244.2_JASPAR_shift8 (ABR1:MA1244.2:JASPAR) 0.828 0.759 5.096 0.921 0.931 353 37 364 217 284 251.000
; assembly_13 versus ABR1_MA1244.2_JASPAR (ABR1:MA1244.2:JASPAR); m=9/229; ncol2=12; w=-1; offset=-1; strand=D; shift=8; score= 251; --------rtkrCGGCGGmG ; cor=0.828; Ncor=0.759; logoDP=5.096; NsEucl=0.921; NSW=0.931; rcor=353; rNcor=37; rlogoDP=364; rNsEucl=217; rNSW=284; rank_mean=251.000; match_rank= a 0 0 0 0 0 0 0 0 253 103 59 150 2 0 0 4 5 33 196 66 c 0 0 0 0 0 0 0 0 18 97 15 27 590 0 12 584 10 105 298 36 g 0 0 0 0 0 0 0 0 193 14 308 401 0 598 588 0 550 445 30 421 t 0 0 0 0 0 0 0 0 136 386 218 22 8 2 0 12 35 17 76 77

ERF122_MA1261.2_JASPAR_shift10 (ERF122:MA1261.2:JASPAR) 0.835 0.759 4.141 0.922 0.939 327 40 500 198 197 252.400
; assembly_13 versus ERF122_MA1261.2_JASPAR (ERF122:MA1261.2:JASPAR); m=10/229; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 252.4; ----------yrCGGCkGhk ; cor=0.835; Ncor=0.759; logoDP=4.141; NsEucl=0.922; NSW=0.939; rcor=327; rNcor=40; rlogoDP=500; rNsEucl=198; rNSW=197; rank_mean=252.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 10 55 0 0 0 0 0 25 41 0 c 0 0 0 0 0 0 0 0 0 0 35 0 120 0 0 106 3 0 53 10 g 0 0 0 0 0 0 0 0 0 0 16 80 0 136 138 0 89 106 9 91 t 0 0 0 0 0 0 0 0 0 0 77 3 18 2 0 32 46 7 35 37

ERF086_MA1252.2_JASPAR_rc_shift11 (ERF086:MA1252.2:JASPAR_rc) 0.894 0.670 2.968 0.922 0.945 127 148 644 199 149 253.400
; assembly_13 versus ERF086_MA1252.2_JASPAR_rc (ERF086:MA1252.2:JASPAR_rc); m=11/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 253.4; -----------rCGGCGGmG ; cor=0.894; Ncor=0.670; logoDP=2.968; NsEucl=0.922; NSW=0.945; rcor=127; rNcor=148; rlogoDP=644; rNsEucl=199; rNSW=149; rank_mean=253.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 199 6 0 9 1 0 20 163 42 c 0 0 0 0 0 0 0 0 0 0 0 11 459 0 1 469 0 61 256 0 g 0 0 0 0 0 0 0 0 0 0 0 260 0 475 466 0 477 397 0 397 t 0 0 0 0 0 0 0 0 0 0 0 8 13 3 2 8 1 0 59 39

ERF11_MA1001.2_JASPAR_rc_shift7 (ERF11:MA1001.2:JASPAR_rc) 0.879 0.676 2.715 0.926 0.945 157 139 693 151 148 257.600
; assembly_13 versus ERF11_MA1001.2_JASPAR_rc (ERF11:MA1001.2:JASPAR_rc); m=12/229; ncol2=12; w=-2; offset=-2; strand=R; shift=7; score= 257.6; -------ddTGRCGGCGgm- ; cor=0.879; Ncor=0.676; logoDP=2.715; NsEucl=0.926; NSW=0.945; rcor=157; rNcor=139; rlogoDP=693; rNsEucl=151; rNSW=148; rank_mean=257.600; match_rank= a 0 0 0 0 0 0 0 356 414 120 96 894 12 2 19 31 10 198 377 0 c 0 0 0 0 0 0 0 160 136 134 40 22 1252 2 23 1218 8 203 455 0 g 0 0 0 0 0 0 0 391 407 28 1081 331 0 1269 1230 1 1243 728 136 0 t 0 0 0 0 0 0 0 373 323 998 63 33 16 7 8 30 19 151 312 0

PUCHI_MA1252.1_JASPAR_rc_shift9 (PUCHI:MA1252.1:JASPAR_rc) 0.886 0.650 1.626 0.933 0.951 142 193 780 112 127 270.800
; assembly_13 versus PUCHI_MA1252.1_JASPAR_rc (PUCHI:MA1252.1:JASPAR_rc); m=13/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 270.8; ---------hrrCGGCGGmG ; cor=0.886; Ncor=0.650; logoDP=1.626; NsEucl=0.933; NSW=0.951; rcor=142; rNcor=193; rlogoDP=780; rNsEucl=112; rNSW=127; rank_mean=270.800; match_rank= a 0 0 0 0 0 0 0 0 0 124 126 199 6 0 9 1 0 20 163 42 c 0 0 0 0 0 0 0 0 0 123 34 11 459 0 1 469 0 61 256 0 g 0 0 0 0 0 0 0 0 0 37 214 260 0 475 466 0 477 397 0 397 t 0 0 0 0 0 0 0 0 0 194 104 8 13 3 2 8 1 0 59 39

LEP_MA1246.2_JASPAR_rc_shift10 (LEP:MA1246.2:JASPAR_rc) 0.858 0.780 2.771 0.920 0.936 230 27 685 230 229 280.200
; assembly_13 versus LEP_MA1246.2_JASPAR_rc (LEP:MA1246.2:JASPAR_rc); m=14/229; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 280.2; ----------grCGGCGGmG ; cor=0.858; Ncor=0.780; logoDP=2.771; NsEucl=0.920; NSW=0.936; rcor=230; rNcor=27; rlogoDP=685; rNsEucl=230; rNSW=229; rank_mean=280.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 90 157 7 1 10 8 0 36 172 32 c 0 0 0 0 0 0 0 0 0 0 22 20 460 0 0 456 0 52 226 9 g 0 0 0 0 0 0 0 0 0 0 303 301 0 489 480 0 488 398 23 413 t 0 0 0 0 0 0 0 0 0 0 75 12 23 0 0 26 2 4 69 36

Zm00001d052229_MA1818.1_JASPAR_rc_shift10 (Zm00001d052229:MA1818.1:JASPAR_rc) 0.850 0.772 3.807 0.916 0.930 261 31 545 275 301 282.600
; assembly_13 versus Zm00001d052229_MA1818.1_JASPAR_rc (Zm00001d052229:MA1818.1:JASPAR_rc); m=15/229; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 282.6; ----------ggCGGCGGcg ; cor=0.850; Ncor=0.772; logoDP=3.807; NsEucl=0.916; NSW=0.930; rcor=261; rNcor=31; rlogoDP=545; rNsEucl=275; rNSW=301; rank_mean=282.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 986 1210 0 0 0 0 0 0 969 1151 c 0 0 0 0 0 0 0 0 0 0 1908 1720 8956 0 0 8956 0 0 5207 2029 g 0 0 0 0 0 0 0 0 0 0 5142 5049 0 8956 8956 0 8956 8956 1587 4801 t 0 0 0 0 0 0 0 0 0 0 920 977 0 0 0 0 0 0 1193 975

AT5G67000_MA1261.1_JASPAR_shift6 (AT5G67000:MA1261.1:JASPAR) 0.833 0.611 4.143 0.928 0.944 336 303 499 133 161 286.400
; assembly_13 versus AT5G67000_MA1261.1_JASPAR (AT5G67000:MA1261.1:JASPAR); m=16/229; ncol2=15; w=-3; offset=-3; strand=D; shift=6; score= 286.4; ------ykdwyrCGGCkGhk ; cor=0.833; Ncor=0.611; logoDP=4.143; NsEucl=0.928; NSW=0.944; rcor=336; rNcor=303; rlogoDP=499; rNsEucl=133; rNSW=161; rank_mean=286.400; match_rank= a 0 0 0 0 0 0 34 26 39 40 10 55 0 0 0 0 0 25 41 0 c 0 0 0 0 0 0 47 20 7 30 35 0 120 0 0 106 3 0 53 10 g 0 0 0 0 0 0 15 42 57 14 16 80 0 136 138 0 89 106 9 91 t 0 0 0 0 0 0 42 50 35 54 77 3 18 2 0 32 46 7 35 37

ERF4_MA0992.2_JASPAR_rc_shift7 (ERF4:MA0992.2:JASPAR_rc) 0.866 0.666 2.826 0.921 0.938 205 163 674 209 208 291.800
; assembly_13 versus ERF4_MA0992.2_JASPAR_rc (ERF4:MA0992.2:JASPAR_rc); m=17/229; ncol2=12; w=-2; offset=-2; strand=R; shift=7; score= 291.8; -------drTGrCGGCGgm- ; cor=0.866; Ncor=0.666; logoDP=2.826; NsEucl=0.921; NSW=0.938; rcor=205; rNcor=163; rlogoDP=674; rNsEucl=209; rNSW=208; rank_mean=291.800; match_rank= a 0 0 0 0 0 0 0 305 363 86 56 627 8 1 17 19 5 126 319 0 c 0 0 0 0 0 0 0 113 101 91 25 13 1006 2 9 979 2 165 368 0 g 0 0 0 0 0 0 0 287 306 19 900 349 0 1015 992 1 1005 644 109 0 t 0 0 0 0 0 0 0 318 253 827 42 34 9 5 5 24 11 88 227 0

LBD13_MA2021.1_JASPAR_rc_shift8 (LBD13:MA2021.1:JASPAR_rc) 0.833 0.705 2.761 0.926 0.940 337 103 686 148 185 291.800
; assembly_13 versus LBD13_MA2021.1_JASPAR_rc (LBD13:MA2021.1:JASPAR_rc); m=18/229; ncol2=13; w=-1; offset=-1; strand=R; shift=8; score= 291.8; --------dhkaCGGTGGag ; cor=0.833; Ncor=0.705; logoDP=2.761; NsEucl=0.926; NSW=0.940; rcor=337; rNcor=103; rlogoDP=686; rNsEucl=148; rNSW=185; rank_mean=291.800; match_rank= a 0 0 0 0 0 0 0 0 267 329 221 628 18 8 9 72 17 39 635 198 c 0 0 0 0 0 0 0 0 148 306 112 143 980 16 8 168 4 20 145 116 g 0 0 0 0 0 0 0 0 370 125 369 227 11 1021 1031 6 1018 979 44 494 t 0 0 0 0 0 0 0 0 270 295 353 57 46 10 7 809 16 17 231 247

ERF115.ampDAP_M0030_AthalianaCistrome_shift5 (ERF115.ampDAP:M0030:AthalianaCistrome) 0.832 0.610 5.041 0.922 0.933 339 307 383 197 257 296.600
; assembly_13 versus ERF115.ampDAP_M0030_AthalianaCistrome (ERF115.ampDAP:M0030:AthalianaCistrome); m=19/229; ncol2=15; w=-4; offset=-4; strand=D; shift=5; score= 296.6; -----gmrrykrCGGCGGmg ; cor=0.832; Ncor=0.610; logoDP=5.041; NsEucl=0.922; NSW=0.933; rcor=339; rNcor=307; rlogoDP=383; rNsEucl=197; rNSW=257; rank_mean=296.600; match_rank= a 0 0 0 0 0 137 170 197 281 82 59 176 0 0 0 3 8 45 191 74 c 0 0 0 0 0 60 251 41 10 157 3 9 593 0 0 586 5 117 303 26 g 0 0 0 0 0 339 39 221 223 9 337 397 0 588 598 0 521 422 25 405 t 0 0 0 0 0 62 138 139 84 350 199 16 5 10 0 9 64 14 79 93

JUB1_MA2017.2_JASPAR_shift11 (JUB1:MA2017.2:JASPAR) 0.898 0.572 4.815 0.911 0.945 116 457 421 355 152 300.200
; assembly_13 versus JUB1_MA2017.2_JASPAR (JUB1:MA2017.2:JASPAR); m=20/229; ncol2=7; w=0; offset=2; strand=D; shift=11; score= 300.2; -----------ACGGCGa-- ; cor=0.898; Ncor=0.572; logoDP=4.815; NsEucl=0.911; NSW=0.945; rcor=116; rNcor=457; rlogoDP=421; rNsEucl=355; rNSW=152; rank_mean=300.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 458 9 9 3 12 33 288 0 0 c 0 0 0 0 0 0 0 0 0 0 0 30 492 8 12 476 10 36 0 0 g 0 0 0 0 0 0 0 0 0 0 0 10 0 489 492 0 457 82 0 0 t 0 0 0 0 0 0 0 0 0 0 0 11 8 3 2 21 9 103 0 0

ERF8_MA0994.2_JASPAR_shift6 (ERF8:MA0994.2:JASPAR) 0.866 0.529 5.091 0.926 0.940 202 602 367 154 191 303.200
; assembly_13 versus ERF8_MA0994.2_JASPAR (ERF8:MA0994.2:JASPAR); m=21/229; ncol2=18; w=-3; offset=-3; strand=D; shift=6; score= 303.2; ------hrrtgrCGGCGGCG ; cor=0.866; Ncor=0.529; logoDP=5.091; NsEucl=0.926; NSW=0.940; rcor=202; rNcor=602; rlogoDP=367; rNsEucl=154; rNSW=191; rank_mean=303.200; match_rank= a 0 0 0 0 0 0 195 198 249 116 103 426 32 3 16 11 6 16 108 21 c 0 0 0 0 0 0 222 79 91 180 50 29 649 3 9 701 2 46 537 9 g 0 0 0 0 0 0 125 286 273 33 491 252 5 728 714 0 728 667 11 674 t 0 0 0 0 0 0 201 180 130 414 99 36 57 9 4 31 7 14 87 39

AT3G11100_UN0353.1_JASPAR_shift9 (AT3G11100:UN0353.1:JASPAR) 0.802 0.735 4.470 0.920 0.930 493 59 452 221 291 303.200
; assembly_13 versus AT3G11100_UN0353.1_JASPAR (AT3G11100:UN0353.1:JASPAR); m=22/229; ncol2=12; w=0; offset=0; strand=D; shift=9; score= 303.2; ---------ygmCGGCGAsr ; cor=0.802; Ncor=0.735; logoDP=4.470; NsEucl=0.920; NSW=0.930; rcor=493; rNcor=59; rlogoDP=452; rNsEucl=221; rNSW=291; rank_mean=303.200; match_rank= a 0 0 0 0 0 0 0 0 0 479 615 1432 16 24 57 102 73 2127 355 760 c 0 0 0 0 0 0 0 0 0 1021 330 652 2413 13 26 2298 55 58 653 289 g 0 0 0 0 0 0 0 0 0 300 1002 254 6 2445 2394 12 2311 198 886 875 t 0 0 0 0 0 0 0 0 0 696 549 158 61 14 19 84 57 113 602 572

ERF11.DAP_M0039_AthalianaCistrome_rc_shift9 (ERF11.DAP:M0039:AthalianaCistrome_rc) 0.862 0.632 1.640 0.926 0.940 219 235 776 145 183 311.600
; assembly_13 versus ERF11.DAP_M0039_AthalianaCistrome_rc (ERF11.DAP:M0039:AthalianaCistrome_rc); m=23/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 311.6; ---------tgrCGGCGGmG ; cor=0.862; Ncor=0.632; logoDP=1.640; NsEucl=0.926; NSW=0.940; rcor=219; rNcor=235; rlogoDP=776; rNsEucl=145; rNSW=183; rank_mean=311.600; match_rank= a 0 0 0 0 0 0 0 0 0 124 106 230 16 0 13 0 0 14 191 38 c 0 0 0 0 0 0 0 0 0 137 24 8 541 0 9 571 1 54 319 4 g 0 0 0 0 0 0 0 0 0 20 353 351 0 596 574 0 584 524 3 501 t 0 0 0 0 0 0 0 0 0 315 113 7 39 0 0 25 11 4 83 53

ERF13.ampDAP_M0032_AthalianaCistrome_shift9 (ERF13.ampDAP:M0032:AthalianaCistrome) 0.823 0.603 4.938 0.920 0.930 382 332 399 222 293 325.600
; assembly_13 versus ERF13.ampDAP_M0032_AthalianaCistrome (ERF13.ampDAP:M0032:AthalianaCistrome); m=24/229; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 325.6; ---------hwryGGCGGCk ; cor=0.823; Ncor=0.603; logoDP=4.938; NsEucl=0.920; NSW=0.930; rcor=382; rNcor=332; rlogoDP=399; rNsEucl=222; rNSW=293; rank_mean=325.600; match_rank= a 0 0 0 0 0 0 0 0 0 181 242 303 100 3 51 1 0 2 0 5 c 0 0 0 0 0 0 0 0 0 169 54 49 201 0 0 577 0 0 577 31 g 0 0 0 0 0 0 0 0 0 61 133 156 6 575 484 0 573 576 0 307 t 0 0 0 0 0 0 0 0 0 167 149 70 271 0 43 0 5 0 1 235

RRTF1.ampDAP_M0066_AthalianaCistrome_shift4 (RRTF1.ampDAP:M0066:AthalianaCistrome) 0.851 0.493 5.300 0.927 0.942 253 739 330 139 174 327.000
; assembly_13 versus RRTF1.ampDAP_M0066_AthalianaCistrome (RRTF1.ampDAP:M0066:AthalianaCistrome); m=25/229; ncol2=19; w=-5; offset=-5; strand=D; shift=4; score= 327; ----rraaAWkrCGGCGsmg ; cor=0.851; Ncor=0.493; logoDP=5.300; NsEucl=0.927; NSW=0.942; rcor=253; rNcor=739; rlogoDP=330; rNsEucl=139; rNSW=174; rank_mean=327.000; match_rank= a 0 0 0 0 149 174 276 301 441 152 111 202 0 0 0 0 0 23 184 115 c 0 0 0 0 87 105 104 31 0 13 0 14 578 0 0 578 0 173 256 55 g 0 0 0 0 206 207 93 140 62 2 204 328 0 576 578 0 523 352 50 302 t 0 0 0 0 136 92 105 106 75 411 263 34 0 2 0 0 55 30 88 106

ERF4_MA0992.3_JASPAR_rc_shift9 (ERF4:MA0992.3:JASPAR_rc) 0.866 0.709 2.058 0.913 0.932 200 96 741 330 268 327.000
; assembly_13 versus ERF4_MA0992.3_JASPAR_rc (ERF4:MA0992.3:JASPAR_rc); m=26/229; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 327; ---------TGrCGGCGg-- ; cor=0.866; Ncor=0.709; logoDP=2.058; NsEucl=0.913; NSW=0.932; rcor=200; rNcor=96; rlogoDP=741; rNsEucl=330; rNSW=268; rank_mean=327.000; match_rank= a 0 0 0 0 0 0 0 0 0 86 56 627 8 1 17 19 5 126 0 0 c 0 0 0 0 0 0 0 0 0 91 25 13 1006 2 9 979 2 165 0 0 g 0 0 0 0 0 0 0 0 0 19 900 349 0 1015 992 1 1005 644 0 0 t 0 0 0 0 0 0 0 0 0 827 42 34 9 5 5 24 11 88 0 0

Zm00001d005892_MA1819.2_JASPAR_rc_shift12 (Zm00001d005892:MA1819.2:JASPAR_rc) 0.876 0.637 3.102 0.910 0.934 163 223 629 398 247 332.000
; assembly_13 versus Zm00001d005892_MA1819.2_JASPAR_rc (Zm00001d005892:MA1819.2:JASPAR_rc); m=27/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 332; ------------CGGCGGCG ; cor=0.876; Ncor=0.637; logoDP=3.102; NsEucl=0.910; NSW=0.934; rcor=163; rNcor=223; rlogoDP=629; rNsEucl=398; rNSW=247; rank_mean=332.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 990 748 1310 722 670 1200 765 872 c 0 0 0 0 0 0 0 0 0 0 0 0 24113 990 1696 25421 917 1794 25046 1309 g 0 0 0 0 0 0 0 0 0 0 0 0 1029 25022 23482 435 25251 23527 767 24431 t 0 0 0 0 0 0 0 0 0 0 0 0 1241 613 885 795 535 852 795 761

MYB3R3_MA2343.1_JASPAR_rc_shift9 (MYB3R3:MA2343.1:JASPAR_rc) 0.867 0.631 1.805 0.914 0.941 195 240 762 308 180 337.000
; assembly_13 versus MYB3R3_MA2343.1_JASPAR_rc (MYB3R3:MA2343.1:JASPAR_rc); m=28/229; ncol2=8; w=0; offset=0; strand=R; shift=9; score= 337; ---------TAACGGCg--- ; cor=0.867; Ncor=0.631; logoDP=1.805; NsEucl=0.914; NSW=0.941; rcor=195; rNcor=240; rlogoDP=762; rNsEucl=308; rNSW=180; rank_mean=337.000; match_rank= a 0 0 0 0 0 0 0 0 0 37 681 719 14 23 38 71 101 0 0 0 c 0 0 0 0 0 0 0 0 0 80 25 21 713 17 41 597 84 0 0 0 g 0 0 0 0 0 0 0 0 0 15 42 25 5 719 683 19 438 0 0 0 t 0 0 0 0 0 0 0 0 0 649 33 16 49 22 19 94 158 0 0 0

CRF10.DAP_M0045_AthalianaCistrome_rc_shift9 (CRF10.DAP:M0045:AthalianaCistrome_rc) 0.848 0.622 1.681 0.924 0.936 270 273 771 176 223 342.600
; assembly_13 versus CRF10.DAP_M0045_AthalianaCistrome_rc (CRF10.DAP:M0045:AthalianaCistrome_rc); m=29/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 342.6; ---------ygRCGGCGGmG ; cor=0.848; Ncor=0.622; logoDP=1.681; NsEucl=0.924; NSW=0.936; rcor=270; rNcor=273; rlogoDP=771; rNsEucl=176; rNSW=223; rank_mean=342.600; match_rank= a 0 0 0 0 0 0 0 0 0 126 133 161 18 0 10 1 0 11 195 41 c 0 0 0 0 0 0 0 0 0 182 58 6 549 0 0 553 7 38 319 8 g 0 0 0 0 0 0 0 0 0 37 289 432 0 600 590 0 578 547 7 485 t 0 0 0 0 0 0 0 0 0 255 120 1 33 0 0 46 15 4 79 66

AT5G23930_UN0357.2_JASPAR_rc_shift12 (AT5G23930:UN0357.2:JASPAR_rc) 0.879 0.639 3.807 0.905 0.928 156 217 544 485 312 342.800
; assembly_13 versus AT5G23930_UN0357.2_JASPAR_rc (AT5G23930:UN0357.2:JASPAR_rc); m=30/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 342.8; ------------yGGCGGCk ; cor=0.879; Ncor=0.639; logoDP=3.807; NsEucl=0.905; NSW=0.928; rcor=156; rNcor=217; rlogoDP=544; rNsEucl=485; rNSW=312; rank_mean=342.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 296 0 0 0 0 0 0 125 c 0 0 0 0 0 0 0 0 0 0 0 0 1135 0 0 2074 0 0 2074 91 g 0 0 0 0 0 0 0 0 0 0 0 0 43 2074 2074 0 2074 2074 0 1323 t 0 0 0 0 0 0 0 0 0 0 0 0 600 0 0 0 0 0 0 535

AT1G28160.ampDAP_M0035_AthalianaCistrome_rc_shift9 (AT1G28160.ampDAP:M0035:AthalianaCistrome_rc) 0.838 0.658 2.560 0.920 0.930 315 173 713 223 299 344.600
; assembly_13 versus AT1G28160.ampDAP_M0035_AthalianaCistrome_rc (AT1G28160.ampDAP:M0035:AthalianaCistrome_rc); m=31/229; ncol2=14; w=0; offset=0; strand=R; shift=9; score= 344.6; ---------yGrCGGCGGmG ; cor=0.838; Ncor=0.658; logoDP=2.560; NsEucl=0.920; NSW=0.930; rcor=315; rNcor=173; rlogoDP=713; rNsEucl=223; rNSW=299; rank_mean=344.600; match_rank= a 0 0 0 0 0 0 0 0 0 94 84 199 0 0 0 15 0 26 170 74 c 0 0 0 0 0 0 0 0 0 243 16 6 585 0 0 550 0 105 327 7 g 0 0 0 0 0 0 0 0 0 0 428 381 0 590 592 0 581 447 4 465 t 0 0 0 0 0 0 0 0 0 255 64 6 7 2 0 27 11 14 91 46

Zm00001d002364_MA1832.2_JASPAR_rc_shift10 (Zm00001d002364:MA1832.2:JASPAR_rc) 0.834 0.758 3.828 0.910 0.919 332 41 539 385 428 345.000
; assembly_13 versus Zm00001d002364_MA1832.2_JASPAR_rc (Zm00001d002364:MA1832.2:JASPAR_rc); m=32/229; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 345; ----------ggCGGCGGCg ; cor=0.834; Ncor=0.758; logoDP=3.828; NsEucl=0.910; NSW=0.919; rcor=332; rNcor=41; rlogoDP=539; rNsEucl=385; rNSW=428; rank_mean=345.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 2034 2750 0 0 0 0 0 0 903 2201 c 0 0 0 0 0 0 0 0 0 0 3763 3546 19090 0 0 19090 0 0 13670 3334 g 0 0 0 0 0 0 0 0 0 0 11352 11009 0 19090 19090 0 19090 19090 2981 11808 t 0 0 0 0 0 0 0 0 0 0 1941 1785 0 0 0 0 0 0 1536 1747

LBD19_IG1_AS2_B73_1_m1_EEAD0421_EEADannot_shift12 (LBD19_IG1_AS2_B73_1_m1:EEAD0421:EEADannot) 0.891 0.509 4.086 0.917 0.945 132 686 506 258 150 346.400
; assembly_13 versus LBD19_IG1_AS2_B73_1_m1_EEAD0421_EEADannot (LBD19_IG1_AS2_B73_1_m1:EEAD0421:EEADannot); m=33/229; ncol2=11; w=0; offset=3; strand=D; shift=12; score= 346.4; ------------CGGCGGCG ; cor=0.891; Ncor=0.509; logoDP=4.086; NsEucl=0.917; NSW=0.945; rcor=132; rNcor=686; rlogoDP=506; rNsEucl=258; rNSW=150; rank_mean=346.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 6 1 5 5 3 15 11 2 c 0 0 0 0 0 0 0 0 0 0 0 0 92 1 0 86 0 7 76 5 g 0 0 0 0 0 0 0 0 0 0 0 0 0 97 90 3 95 70 5 92 t 0 0 0 0 0 0 0 0 0 0 0 0 2 1 5 6 2 8 8 1

ERF094_MA1049.1_JASPAR_rc_shift12 (ERF094:MA1049.1:JASPAR_rc) 0.864 0.628 3.271 0.907 0.931 213 251 610 445 278 359.400
; assembly_13 versus ERF094_MA1049.1_JASPAR_rc (ERF094:MA1049.1:JASPAR_rc); m=34/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 359.4; ------------cGGCGGCk ; cor=0.864; Ncor=0.628; logoDP=3.271; NsEucl=0.907; NSW=0.931; rcor=213; rNcor=251; rlogoDP=610; rNsEucl=445; rNSW=278; rank_mean=359.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 173 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 482 0 49 975 0 0 999 192 g 0 0 0 0 0 0 0 0 0 0 0 0 104 999 951 0 877 999 0 461 t 0 0 0 0 0 0 0 0 0 0 0 0 241 0 0 25 122 0 0 346

ORA59_M0005_1.02_CISBP_rc_shift12 (ORA59:M0005_1.02:CISBP_rc) 0.864 0.628 3.298 0.907 0.931 214 252 606 451 282 361.000
; assembly_13 versus ORA59_M0005_1.02_CISBP_rc (ORA59:M0005_1.02:CISBP_rc); m=35/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 361; ------------cGGCGGCk ; cor=0.864; Ncor=0.628; logoDP=3.298; NsEucl=0.907; NSW=0.931; rcor=214; rNcor=252; rlogoDP=606; rNsEucl=451; rNSW=282; rank_mean=361.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 48 0 5 98 0 0 100 19 g 0 0 0 0 0 0 0 0 0 0 0 0 11 100 95 0 88 100 0 46 t 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 2 12 0 0 35

At2g33710.ampDAP_M0021_AthalianaCistrome_rc_shift4 (At2g33710.ampDAP:M0021:AthalianaCistrome_rc) 0.867 0.530 1.537 0.932 0.948 194 599 788 118 138 367.400
; assembly_13 versus At2g33710.ampDAP_M0021_AthalianaCistrome_rc (At2g33710.ampDAP:M0021:AthalianaCistrome_rc); m=36/229; ncol2=18; w=-5; offset=-5; strand=R; shift=4; score= 367.4; ----krmdrwkrCGGCGGCG ; cor=0.867; Ncor=0.530; logoDP=1.537; NsEucl=0.932; NSW=0.948; rcor=194; rNcor=599; rlogoDP=788; rNsEucl=118; rNSW=138; rank_mean=367.400; match_rank= a 0 0 0 0 131 166 205 169 219 177 146 262 22 0 24 0 0 14 111 25 c 0 0 0 0 65 102 204 55 42 129 25 34 470 1 6 596 2 109 451 29 g 0 0 0 0 249 246 61 206 221 18 241 265 3 574 566 0 580 477 10 463 t 0 0 0 0 155 86 130 170 118 276 188 39 105 25 4 4 18 0 28 83

LBD13.ampDAP_M0471_AthalianaCistrome_shift12 (LBD13.ampDAP:M0471:AthalianaCistrome) 0.924 0.411 3.258 0.941 0.972 75 1040 611 74 51 370.200
; assembly_13 versus LBD13.ampDAP_M0471_AthalianaCistrome (LBD13.ampDAP:M0471:AthalianaCistrome); m=37/229; ncol2=15; w=0; offset=3; strand=D; shift=12; score= 370.2; ------------CGsCGgad ; cor=0.924; Ncor=0.411; logoDP=3.258; NsEucl=0.941; NSW=0.972; rcor=75; rNcor=1040; rlogoDP=611; rNsEucl=74; rNSW=51; rank_mean=370.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 34 34 4 17 23 116 298 245 c 0 0 0 0 0 0 0 0 0 0 0 0 494 6 210 581 0 110 94 14 g 0 0 0 0 0 0 0 0 0 0 0 0 4 507 384 0 560 280 106 170 t 0 0 0 0 0 0 0 0 0 0 0 0 66 51 0 0 15 92 100 169

NtERF2_NtERF2_Athamap_rc_shift13 (NtERF2:NtERF2:Athamap_rc) 0.875 0.557 1.622 0.916 0.951 167 511 781 271 126 371.200
; assembly_13 versus NtERF2_NtERF2_Athamap_rc (NtERF2:NtERF2:Athamap_rc); m=38/229; ncol2=7; w=0; offset=4; strand=R; shift=13; score= 371.2; -------------GGCGGCr ; cor=0.875; Ncor=0.557; logoDP=1.622; NsEucl=0.916; NSW=0.951; rcor=167; rNcor=511; rlogoDP=781; rNsEucl=271; rNSW=126; rank_mean=371.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 4 c 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 13 2 3 12 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 13 10 0 11 10 1 7 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 1 0 2

AT2G33710_MA1245.1_JASPAR_rc_shift9 (AT2G33710:MA1245.1:JASPAR_rc) 0.839 0.615 1.516 0.921 0.932 307 288 790 210 269 372.800
; assembly_13 versus AT2G33710_MA1245.1_JASPAR_rc (AT2G33710:MA1245.1:JASPAR_rc); m=39/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 372.8; ---------ykrCGGCGGmG ; cor=0.839; Ncor=0.615; logoDP=1.516; NsEucl=0.921; NSW=0.932; rcor=307; rNcor=288; rlogoDP=790; rNsEucl=210; rNSW=269; rank_mean=372.800; match_rank= a 0 0 0 0 0 0 0 0 0 123 67 192 1 0 0 7 0 12 160 32 c 0 0 0 0 0 0 0 0 0 156 17 11 551 0 11 551 3 112 350 13 g 0 0 0 0 0 0 0 0 0 11 350 372 0 583 572 0 573 456 8 475 t 0 0 0 0 0 0 0 0 0 293 149 8 31 0 0 25 7 3 65 63

ERF3.ampDAP_M0074_AthalianaCistrome_shift9 (ERF3.ampDAP:M0074:AthalianaCistrome) 0.843 0.463 5.177 0.924 0.937 290 843 349 170 217 373.800
; assembly_13 versus ERF3.ampDAP_M0074_AthalianaCistrome (ERF3.ampDAP:M0074:AthalianaCistrome); m=40/229; ncol2=20; w=0; offset=0; strand=D; shift=9; score= 373.8; ---------yGrCGGCGGmg ; cor=0.843; Ncor=0.463; logoDP=5.177; NsEucl=0.924; NSW=0.937; rcor=290; rNcor=843; rlogoDP=349; rNsEucl=170; rNSW=217; rank_mean=373.800; match_rank= a 0 0 0 0 0 0 0 0 0 87 58 182 0 0 2 2 0 51 205 104 c 0 0 0 0 0 0 0 0 0 164 9 5 557 0 2 556 0 87 214 16 g 0 0 0 0 0 0 0 0 0 9 399 376 0 567 563 0 504 398 34 370 t 0 0 0 0 0 0 0 0 0 307 101 4 10 0 0 9 63 31 114 77

ERF15_MA1231.3_JASPAR_rc_shift12 (ERF15:MA1231.3:JASPAR_rc) 0.864 0.628 3.257 0.905 0.929 215 253 612 481 310 374.200
; assembly_13 versus ERF15_MA1231.3_JASPAR_rc (ERF15:MA1231.3:JASPAR_rc); m=41/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 374.2; ------------hGGCGGCk ; cor=0.864; Ncor=0.628; logoDP=3.257; NsEucl=0.905; NSW=0.929; rcor=215; rNcor=253; rlogoDP=612; rNsEucl=481; rNSW=310; rank_mean=374.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 581 8 39 12 9 5 18 87 c 0 0 0 0 0 0 0 0 0 0 0 0 911 8 14 2067 3 1 2078 94 g 0 0 0 0 0 0 0 0 0 0 0 0 62 2107 2066 3 2062 2124 7 942 t 0 0 0 0 0 0 0 0 0 0 0 0 579 10 14 51 59 3 30 1010

ERF9_MA1257.2_JASPAR_shift1 (ERF9:MA1257.2:JASPAR) 0.841 0.487 4.857 0.923 0.936 295 767 410 179 231 376.400
; assembly_13 versus ERF9_MA1257.2_JASPAR (ERF9:MA1257.2:JASPAR); m=42/229; ncol2=19; w=-8; offset=-8; strand=D; shift=1; score= 376.4; -ggcggmkryGrCGGCGGmG ; cor=0.841; Ncor=0.487; logoDP=4.857; NsEucl=0.923; NSW=0.936; rcor=295; rNcor=767; rlogoDP=410; rNsEucl=179; rNSW=231; rank_mean=376.400; match_rank= a 0 89 109 106 83 106 143 104 161 111 73 167 26 0 10 16 4 31 204 52 c 0 24 50 265 32 63 239 32 37 167 6 15 496 0 0 493 0 34 253 8 g 0 353 336 69 343 333 39 269 270 17 383 360 0 551 544 0 514 483 6 439 t 0 89 60 115 97 53 134 150 87 260 93 13 33 4 1 46 37 7 92 56

ERF8.DAP_M0044_AthalianaCistrome_rc_shift10 (ERF8.DAP:M0044:AthalianaCistrome_rc) 0.875 0.547 1.016 0.925 0.943 169 545 847 167 164 378.400
; assembly_13 versus ERF8.DAP_M0044_AthalianaCistrome_rc (ERF8.DAP:M0044:AthalianaCistrome_rc); m=43/229; ncol2=15; w=0; offset=1; strand=R; shift=10; score= 378.4; ----------krCGGCGGmG ; cor=0.875; Ncor=0.547; logoDP=1.016; NsEucl=0.925; NSW=0.943; rcor=169; rNcor=545; rlogoDP=847; rNsEucl=167; rNSW=164; rank_mean=378.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 127 211 0 0 34 5 0 2 156 35 c 0 0 0 0 0 0 0 0 0 0 39 33 508 0 0 570 1 32 349 7 g 0 0 0 0 0 0 0 0 0 0 274 314 0 587 555 0 587 545 0 492 t 0 0 0 0 0 0 0 0 0 0 149 31 81 2 0 14 1 10 84 55

ESE1_MA1264.1_JASPAR_shift9 (ESE1:MA1264.1:JASPAR) 0.806 0.591 5.092 0.915 0.920 474 384 366 298 424 389.200
; assembly_13 versus ESE1_MA1264.1_JASPAR (ESE1:MA1264.1:JASPAR); m=44/229; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 389.2; ---------ygryGGCGGCG ; cor=0.806; Ncor=0.591; logoDP=5.092; NsEucl=0.915; NSW=0.920; rcor=474; rNcor=384; rlogoDP=366; rNsEucl=298; rNSW=424; rank_mean=389.200; match_rank= a 0 0 0 0 0 0 0 0 0 124 137 189 78 4 55 3 0 0 13 5 c 0 0 0 0 0 0 0 0 0 213 59 45 335 0 2 570 0 4 525 6 g 0 0 0 0 0 0 0 0 0 47 277 327 2 587 534 0 591 587 0 503 t 0 0 0 0 0 0 0 0 0 207 118 30 176 0 0 18 0 0 53 77

ABR1_MA1244.1_JASPAR_shift1 (ABR1:MA1244.1:JASPAR) 0.828 0.480 5.096 0.921 0.931 353 783 364 217 284 400.200
; assembly_13 versus ABR1_MA1244.1_JASPAR (ABR1:MA1244.1:JASPAR); m=45/229; ncol2=19; w=-8; offset=-8; strand=D; shift=1; score= 400.2; -ggcgradrtkrCGGCGGmG ; cor=0.828; Ncor=0.480; logoDP=5.096; NsEucl=0.921; NSW=0.931; rcor=353; rNcor=783; rlogoDP=364; rNsEucl=217; rNSW=284; rank_mean=400.200; match_rank= a 0 122 145 140 100 181 237 225 253 103 59 150 2 0 0 4 5 33 196 66 c 0 57 75 230 64 79 149 26 18 97 15 27 590 0 12 584 10 105 298 36 g 0 317 281 96 308 285 79 186 193 14 308 401 0 598 588 0 550 445 30 421 t 0 104 99 134 128 55 135 163 136 386 218 22 8 2 0 12 35 17 76 77

Zm00001d020595_MA1821.2_JASPAR_shift10 (Zm00001d020595:MA1821.2:JASPAR) 0.804 0.731 6.292 0.899 0.899 481 60 209 613 662 405.000
; assembly_13 versus Zm00001d020595_MA1821.2_JASPAR (Zm00001d020595:MA1821.2:JASPAR); m=46/229; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 405; ----------ggCGGCGGCg ; cor=0.804; Ncor=0.731; logoDP=6.292; NsEucl=0.899; NSW=0.899; rcor=481; rNcor=60; rlogoDP=209; rNsEucl=613; rNSW=662; rank_mean=405.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 856 962 0 0 1 0 0 0 0 759 c 0 0 0 0 0 0 0 0 0 0 1437 1187 7064 0 0 7062 0 0 7056 1193 g 0 0 0 0 0 0 0 0 0 0 3902 4239 0 7064 7061 1 7064 7064 3 4405 t 0 0 0 0 0 0 0 0 0 0 869 676 0 0 2 1 0 0 5 707

ERF024PS_EEAD0159_EEADannot_rc_shift9 (ERF024PS:EEAD0159:EEADannot_rc) 0.807 0.592 1.972 0.922 0.934 464 374 746 193 250 405.400
; assembly_13 versus ERF024PS_EEAD0159_EEADannot_rc (ERF024PS:EEAD0159:EEADannot_rc); m=47/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 405.4; ---------mrryGkCGGCR ; cor=0.807; Ncor=0.592; logoDP=1.972; NsEucl=0.922; NSW=0.934; rcor=464; rNcor=374; rlogoDP=746; rNsEucl=193; rNSW=250; rank_mean=405.400; match_rank= a 0 0 0 0 0 0 0 0 0 25 31 33 4 0 24 3 0 7 10 26 c 0 0 0 0 0 0 0 0 0 35 8 10 60 0 0 97 0 0 68 3 g 0 0 0 0 0 0 0 0 0 23 53 41 0 100 44 0 100 93 3 68 t 0 0 0 0 0 0 0 0 0 17 8 16 36 0 32 0 0 0 19 3

DEAR3_MA1376.2_JASPAR_rc_shift13 (DEAR3:MA1376.2:JASPAR_rc) 0.864 0.550 1.397 0.912 0.946 211 537 798 343 144 406.600
; assembly_13 versus DEAR3_MA1376.2_JASPAR_rc (DEAR3:MA1376.2:JASPAR_rc); m=48/229; ncol2=7; w=0; offset=4; strand=R; shift=13; score= 406.6; -------------GkCGGyG ; cor=0.864; Ncor=0.550; logoDP=1.397; NsEucl=0.912; NSW=0.946; rcor=211; rNcor=537; rlogoDP=798; rNsEucl=343; rNSW=144; rank_mean=406.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 34 101 26 8 26 17 41 c 0 0 0 0 0 0 0 0 0 0 0 0 0 68 56 865 19 58 634 24 g 0 0 0 0 0 0 0 0 0 0 0 0 0 828 524 44 934 889 15 787 t 0 0 0 0 0 0 0 0 0 0 0 0 0 70 320 66 39 27 335 148

ERF9_MA1257.1_JASPAR_shift0 (ERF9:MA1257.1:JASPAR) 0.841 0.440 4.857 0.923 0.936 295 927 410 179 231 408.400
; assembly_13 versus ERF9_MA1257.1_JASPAR (ERF9:MA1257.1:JASPAR); m=49/229; ncol2=21; w=-9; offset=-9; strand=D; shift=0; score= 408.4; yggcggmkryGrCGGCGGmG ; cor=0.841; Ncor=0.440; logoDP=4.857; NsEucl=0.923; NSW=0.936; rcor=295; rNcor=927; rlogoDP=410; rNsEucl=179; rNSW=231; rank_mean=408.400; match_rank= a 90 89 109 106 83 106 143 104 161 111 73 167 26 0 10 16 4 31 204 52 c 246 24 50 265 32 63 239 32 37 167 6 15 496 0 0 493 0 34 253 8 g 79 353 336 69 343 333 39 269 270 17 383 360 0 551 544 0 514 483 6 439 t 140 89 60 115 97 53 134 150 87 260 93 13 33 4 1 46 37 7 92 56

CRF4.ampDAP_M0079_AthalianaCistrome_shift9 (CRF4.ampDAP:M0079:AthalianaCistrome) 0.803 0.589 5.209 0.912 0.915 484 392 344 345 479 408.800
; assembly_13 versus CRF4.ampDAP_M0079_AthalianaCistrome (CRF4.ampDAP:M0079:AthalianaCistrome); m=50/229; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 408.8; ---------ygRCGGCGGCG ; cor=0.803; Ncor=0.589; logoDP=5.209; NsEucl=0.912; NSW=0.915; rcor=484; rNcor=392; rlogoDP=344; rNsEucl=345; rNSW=479; rank_mean=408.800; match_rank= a 0 0 0 0 0 0 0 0 0 138 102 158 14 8 10 4 0 1 100 17 c 0 0 0 0 0 0 0 0 0 192 36 1 447 0 4 561 0 33 460 9 g 0 0 0 0 0 0 0 0 0 19 382 420 0 585 586 0 600 566 0 530 t 0 0 0 0 0 0 0 0 0 251 80 21 139 7 0 35 0 0 40 44

ESE3_MA1236.1_JASPAR_shift3 (ESE3:MA1236.1:JASPAR) 0.826 0.478 4.905 0.921 0.931 365 791 405 212 273 409.200
; assembly_13 versus ESE3_MA1236.1_JASPAR (ESE3:MA1236.1:JASPAR); m=51/229; ncol2=19; w=-6; offset=-6; strand=D; shift=3; score= 409.2; ---cgghgghggCGGyGGmG ; cor=0.826; Ncor=0.478; logoDP=4.905; NsEucl=0.921; NSW=0.931; rcor=365; rNcor=791; rlogoDP=405; rNsEucl=212; rNSW=273; rank_mean=409.200; match_rank= a 0 0 0 148 96 113 186 146 114 178 90 146 12 0 1 29 0 15 270 46 c 0 0 0 219 48 65 185 26 30 153 7 17 543 0 3 400 0 45 211 9 g 0 0 0 100 362 368 64 307 331 28 374 385 0 596 592 0 587 524 19 501 t 0 0 0 129 90 50 161 117 121 237 125 48 41 0 0 167 9 12 96 40

AS2.DAP_M0477_AthalianaCistrome_rc_shift0 (AS2.DAP:M0477:AthalianaCistrome_rc) 0.871 0.456 1.051 0.940 0.960 185 865 842 78 87 411.400
; assembly_13 versus AS2.DAP_M0477_AthalianaCistrome_rc (AS2.DAP:M0477:AthalianaCistrome_rc); m=52/229; ncol2=21; w=-9; offset=-9; strand=R; shift=0; score= 411.4; CGsCGgmrrwkrCGGcGgmg ; cor=0.871; Ncor=0.456; logoDP=1.051; NsEucl=0.940; NSW=0.960; rcor=185; rNcor=865; rlogoDP=842; rNsEucl=78; rNSW=87; rank_mean=411.400; match_rank= a 36 39 16 22 9 69 209 166 189 180 97 126 54 2 0 99 34 104 178 94 c 319 16 133 411 0 18 110 10 22 102 52 51 357 2 65 275 10 18 123 26 g 8 350 287 1 407 298 55 192 155 16 163 233 0 433 372 14 362 272 47 221 t 76 34 3 5 23 54 65 71 73 141 127 29 28 2 2 51 33 45 91 98

ERF118_MA1671.1_JASPAR_rc_shift9 (ERF118:MA1671.1:JASPAR_rc) 0.778 0.778 3.837 0.911 0.912 628 29 538 368 499 412.400
; assembly_13 versus ERF118_MA1671.1_JASPAR_rc (ERF118:MA1671.1:JASPAR_rc); m=53/229; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 412.4; ---------ygGCGGCGghg ; cor=0.778; Ncor=0.778; logoDP=3.837; NsEucl=0.911; NSW=0.912; rcor=628; rNcor=29; rlogoDP=538; rNsEucl=368; rNSW=499; rank_mean=412.400; match_rank= a 0 0 0 0 0 0 0 0 0 639 617 48 30 7 1 10 26 482 894 643 c 0 0 0 0 0 0 0 0 0 1537 286 11 3190 3 2 3186 0 354 1143 234 g 0 0 0 0 0 0 0 0 0 292 1903 3338 9 3370 3396 8 3343 2309 385 1819 t 0 0 0 0 0 0 0 0 0 931 593 2 170 19 0 195 30 254 977 703

ERF13_MA1004.2_JASPAR_rc_shift13 (ERF13:MA1004.2:JASPAR_rc) 0.880 0.560 2.476 0.906 0.938 155 505 719 477 213 413.800
; assembly_13 versus ERF13_MA1004.2_JASPAR_rc (ERF13:MA1004.2:JASPAR_rc); m=54/229; ncol2=7; w=0; offset=4; strand=R; shift=13; score= 413.8; -------------GgCGGCs ; cor=0.880; Ncor=0.560; logoDP=2.476; NsEucl=0.906; NSW=0.938; rcor=155; rNcor=505; rlogoDP=719; rNsEucl=477; rNSW=213; rank_mean=413.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 113 0 0 0 0 22 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 145 983 16 32 951 283 g 0 0 0 0 0 0 0 0 0 0 0 0 0 999 645 16 983 951 49 478 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 97 0 0 16 0 217

ERF1_M0025_1.02_CISBP_rc_shift11 (ERF1:M0025_1.02:CISBP_rc) 0.834 0.625 3.698 0.905 0.919 334 264 557 490 435 416.000
; assembly_13 versus ERF1_M0025_1.02_CISBP_rc (ERF1:M0025_1.02:CISBP_rc); m=55/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 416; -----------ryGGCGGCk ; cor=0.834; Ncor=0.625; logoDP=3.698; NsEucl=0.905; NSW=0.919; rcor=334; rNcor=264; rlogoDP=557; rNsEucl=490; rNSW=435; rank_mean=416.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 35 7 0 0 0 0 0 0 10 c 0 0 0 0 0 0 0 0 0 0 0 24 50 0 0 100 0 0 100 10 g 0 0 0 0 0 0 0 0 0 0 0 26 7 100 100 0 100 100 0 50 t 0 0 0 0 0 0 0 0 0 0 0 15 36 0 0 0 0 0 0 30

ERF094_MA1049.2_JASPAR_rc_shift13 (ERF094:MA1049.2:JASPAR_rc) 0.891 0.567 2.800 0.903 0.934 133 473 679 547 254 417.200
; assembly_13 versus ERF094_MA1049.2_JASPAR_rc (ERF094:MA1049.2:JASPAR_rc); m=56/229; ncol2=7; w=0; offset=4; strand=R; shift=13; score= 417.2; -------------GGCGGCk ; cor=0.891; Ncor=0.567; logoDP=2.800; NsEucl=0.903; NSW=0.934; rcor=133; rNcor=473; rlogoDP=679; rNsEucl=547; rNSW=254; rank_mean=417.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 975 0 0 999 192 g 0 0 0 0 0 0 0 0 0 0 0 0 0 999 951 0 877 999 0 461 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 122 0 0 346

ERF105_MA1000.2_JASPAR_shift8 (ERF105:MA1000.2:JASPAR) 0.798 0.585 5.343 0.911 0.913 508 409 324 361 493 419.000
; assembly_13 versus ERF105_MA1000.2_JASPAR (ERF105:MA1000.2:JASPAR); m=57/229; ncol2=15; w=-1; offset=-1; strand=D; shift=8; score= 419; --------ghrryGGCGGCG ; cor=0.798; Ncor=0.585; logoDP=5.343; NsEucl=0.911; NSW=0.913; rcor=508; rNcor=409; rlogoDP=324; rNsEucl=361; rNSW=493; rank_mean=419.000; match_rank= a 0 0 0 0 0 0 0 0 144 149 168 189 50 0 21 1 0 0 21 1 c 0 0 0 0 0 0 0 0 57 181 44 37 307 0 0 569 0 1 544 0 g 0 0 0 0 0 0 0 0 278 36 257 312 0 586 565 0 586 585 0 523 t 0 0 0 0 0 0 0 0 107 220 117 48 229 0 0 16 0 0 21 62

Zm00001d020595_MA1821.1_JASPAR_shift10 (Zm00001d020595:MA1821.1:JASPAR) 0.804 0.670 6.292 0.899 0.899 481 151 209 613 662 423.200
; assembly_13 versus Zm00001d020595_MA1821.1_JASPAR (Zm00001d020595:MA1821.1:JASPAR); m=58/229; ncol2=11; w=0; offset=1; strand=D; shift=10; score= 423.2; ----------ggCGGCGGCg ; cor=0.804; Ncor=0.670; logoDP=6.292; NsEucl=0.899; NSW=0.899; rcor=481; rNcor=151; rlogoDP=209; rNsEucl=613; rNSW=662; rank_mean=423.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 856 962 0 0 1 0 0 0 0 759 c 0 0 0 0 0 0 0 0 0 0 1437 1187 7064 0 0 7062 0 0 7056 1193 g 0 0 0 0 0 0 0 0 0 0 3902 4239 0 7064 7061 1 7064 7064 3 4405 t 0 0 0 0 0 0 0 0 0 0 869 676 0 0 2 1 0 0 5 707

ERF003_UN0363.1_JASPAR_rc_shift10 (ERF003:UN0363.1:JASPAR_rc) 0.835 0.596 1.599 0.913 0.924 325 362 783 326 363 431.800
; assembly_13 versus ERF003_UN0363.1_JASPAR_rc (ERF003:UN0363.1:JASPAR_rc); m=59/229; ncol2=13; w=0; offset=1; strand=R; shift=10; score= 431.8; ----------ggCGGCGGaG ; cor=0.835; Ncor=0.596; logoDP=1.599; NsEucl=0.913; NSW=0.924; rcor=325; rNcor=362; rlogoDP=783; rNsEucl=326; rNSW=363; rank_mean=431.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 427 484 50 7 23 119 17 14 1442 95 c 0 0 0 0 0 0 0 0 0 0 166 214 2055 4 52 1796 4 31 463 23 g 0 0 0 0 0 0 0 0 0 0 1095 1288 4 2165 2086 9 2127 2112 19 1992 t 0 0 0 0 0 0 0 0 0 0 489 191 68 1 16 253 29 20 253 67

Zm00001d031796_MA1831.1_JASPAR_shift9 (Zm00001d031796:MA1831.1:JASPAR) 0.769 0.705 4.282 0.910 0.910 674 102 473 394 521 432.800
; assembly_13 versus Zm00001d031796_MA1831.1_JASPAR (Zm00001d031796:MA1831.1:JASPAR); m=60/229; ncol2=12; w=0; offset=0; strand=D; shift=9; score= 432.8; ---------ssACGGCGACg ; cor=0.769; Ncor=0.705; logoDP=4.282; NsEucl=0.910; NSW=0.910; rcor=674; rNcor=102; rlogoDP=473; rNsEucl=394; rNSW=521; rank_mean=432.800; match_rank= a 0 0 0 0 0 0 0 0 0 1688 1680 11164 199 309 1454 227 282 10265 242 2022 c 0 0 0 0 0 0 0 0 0 6667 3534 807 13089 323 655 13138 514 1019 12691 2882 g 0 0 0 0 0 0 0 0 0 3858 7250 1352 257 13025 11443 239 12856 2008 634 7673 t 0 0 0 0 0 0 0 0 0 1608 1357 498 276 164 269 217 169 529 254 1244

Zm00001d031796_MA1831.2_JASPAR_shift10 (Zm00001d031796:MA1831.2:JASPAR) 0.784 0.712 4.280 0.905 0.909 589 81 475 502 538 437.000
; assembly_13 versus Zm00001d031796_MA1831.2_JASPAR (Zm00001d031796:MA1831.2:JASPAR); m=61/229; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 437; ----------sACGGCGACg ; cor=0.784; Ncor=0.712; logoDP=4.280; NsEucl=0.905; NSW=0.909; rcor=589; rNcor=81; rlogoDP=475; rNsEucl=502; rNSW=538; rank_mean=437.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 1680 11164 199 309 1454 227 282 10265 242 2022 c 0 0 0 0 0 0 0 0 0 0 3534 807 13089 323 655 13138 514 1019 12691 2882 g 0 0 0 0 0 0 0 0 0 0 7250 1352 257 13025 11443 239 12856 2008 634 7673 t 0 0 0 0 0 0 0 0 0 0 1357 498 276 164 269 217 169 529 254 1244

ERF024Ved_EEAD0158_EEADannot_shift9 (ERF024Ved:EEAD0158:EEADannot) 0.777 0.570 4.556 0.917 0.923 634 465 446 268 379 438.400
; assembly_13 versus ERF024Ved_EEAD0158_EEADannot (ERF024Ved:EEAD0158:EEADannot); m=62/229; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 438.4; ---------crryGkCGGYr ; cor=0.777; Ncor=0.570; logoDP=4.556; NsEucl=0.917; NSW=0.923; rcor=634; rNcor=465; rlogoDP=446; rNsEucl=268; rNSW=379; rank_mean=438.400; match_rank= a 0 0 0 0 0 0 0 0 0 24 26 28 2 0 22 1 0 5 3 28 c 0 0 0 0 0 0 0 0 0 39 7 10 56 0 0 99 0 0 68 8 g 0 0 0 0 0 0 0 0 0 17 54 41 0 100 36 0 100 95 2 58 t 0 0 0 0 0 0 0 0 0 20 13 21 42 0 42 0 0 0 27 6

LBD16_RA2_B73_1_m1_EEAD0419_EEADannot_rc_shift12 (LBD16_RA2_B73_1_m1:EEAD0419:EEADannot_rc) 0.910 0.404 1.773 0.925 0.955 92 1068 763 168 113 440.800
; assembly_13 versus LBD16_RA2_B73_1_m1_EEAD0419_EEADannot_rc (LBD16_RA2_B73_1_m1:EEAD0419:EEADannot_rc); m=63/229; ncol2=15; w=0; offset=3; strand=R; shift=12; score= 440.8; ------------CGGCGGCG ; cor=0.910; Ncor=0.404; logoDP=1.773; NsEucl=0.925; NSW=0.955; rcor=92; rNcor=1068; rlogoDP=763; rNsEucl=168; rNSW=113; rank_mean=440.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 4 3 1 8 1 3 15 6 c 0 0 0 0 0 0 0 0 0 0 0 0 89 2 11 89 1 11 74 6 g 0 0 0 0 0 0 0 0 0 0 0 0 5 94 88 2 96 81 7 84 t 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 1 2 5 4 4

LBD13_MA2021.2_JASPAR_rc_shift11 (LBD13:MA2021.2:JASPAR_rc) 0.842 0.612 2.390 0.903 0.924 292 299 728 544 365 445.600
; assembly_13 versus LBD13_MA2021.2_JASPAR_rc (LBD13:MA2021.2:JASPAR_rc); m=64/229; ncol2=8; w=0; offset=2; strand=R; shift=11; score= 445.6; -----------aCGGTGGa- ; cor=0.842; Ncor=0.612; logoDP=2.390; NsEucl=0.903; NSW=0.924; rcor=292; rNcor=299; rlogoDP=728; rNsEucl=544; rNSW=365; rank_mean=445.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 628 18 8 9 72 17 39 635 0 c 0 0 0 0 0 0 0 0 0 0 0 143 980 16 8 168 4 20 145 0 g 0 0 0 0 0 0 0 0 0 0 0 227 11 1021 1031 6 1018 979 44 0 t 0 0 0 0 0 0 0 0 0 0 0 57 46 10 7 809 16 17 231 0

ERF11.ampDAP_M0072_AthalianaCistrome_shift4 (ERF11.ampDAP:M0072:AthalianaCistrome) 0.815 0.448 5.227 0.918 0.925 421 898 343 252 350 452.800
; assembly_13 versus ERF11.ampDAP_M0072_AthalianaCistrome (ERF11.ampDAP:M0072:AthalianaCistrome); m=65/229; ncol2=20; w=-5; offset=-5; strand=D; shift=4; score= 452.8; ----rrwwayGrCGGCGghg ; cor=0.815; Ncor=0.448; logoDP=5.227; NsEucl=0.918; NSW=0.925; rcor=421; rNcor=898; rlogoDP=343; rNsEucl=252; rNSW=350; rank_mean=452.800; match_rank= a 0 0 0 0 156 187 209 234 281 75 30 158 0 0 0 0 5 54 171 106 c 0 0 0 0 76 74 124 44 36 147 0 3 569 0 0 568 0 123 193 32 g 0 0 0 0 216 209 79 123 138 0 466 383 0 568 569 0 508 349 53 326 t 0 0 0 0 121 99 157 168 114 347 73 25 0 1 0 1 56 43 152 105

AT3G10030.DAP_M0781_AthalianaCistrome_shift6 (AT3G10030.DAP:M0781:AthalianaCistrome) 0.781 0.613 4.705 0.909 0.909 614 294 425 406 531 454.000
; assembly_13 versus AT3G10030.DAP_M0781_AthalianaCistrome (AT3G10030.DAP:M0781:AthalianaCistrome); m=66/229; ncol2=14; w=-3; offset=-3; strand=D; shift=6; score= 454; ------adtTAACGGCGtya ; cor=0.781; Ncor=0.613; logoDP=4.705; NsEucl=0.909; NSW=0.909; rcor=614; rNcor=294; rlogoDP=425; rNsEucl=406; rNSW=531; rank_mean=454.000; match_rank= a 0 0 0 0 0 0 265 172 77 23 512 598 1 3 5 122 94 105 59 297 c 0 0 0 0 0 0 139 92 89 0 9 0 597 0 32 413 12 62 194 29 g 0 0 0 0 0 0 56 183 101 0 76 0 0 594 548 0 481 94 47 139 t 0 0 0 0 0 0 138 151 331 575 1 0 0 1 13 63 11 337 298 133

ERF7.DAP_M0018_AthalianaCistrome_rc_shift9 (ERF7.DAP:M0018:AthalianaCistrome_rc) 0.872 0.457 0.279 0.935 0.953 177 863 1021 104 117 456.400
; assembly_13 versus ERF7.DAP_M0018_AthalianaCistrome_rc (ERF7.DAP:M0018:AthalianaCistrome_rc); m=67/229; ncol2=21; w=0; offset=0; strand=R; shift=9; score= 456.4; ---------tgrCGGCGGmG ; cor=0.872; Ncor=0.457; logoDP=0.279; NsEucl=0.935; NSW=0.953; rcor=177; rNcor=863; rlogoDP=1021; rNsEucl=104; rNSW=117; rank_mean=456.400; match_rank= a 0 0 0 0 0 0 0 0 0 120 75 252 18 0 13 29 18 49 218 75 c 0 0 0 0 0 0 0 0 0 133 35 10 520 0 0 494 0 40 230 20 g 0 0 0 0 0 0 0 0 0 24 394 327 0 593 574 0 525 467 20 411 t 0 0 0 0 0 0 0 0 0 316 89 4 55 0 6 70 50 37 125 87

Zm00001d002364_MA1832.1_JASPAR_rc_shift10 (Zm00001d002364:MA1832.1:JASPAR_rc) 0.834 0.695 0.250 0.910 0.919 332 114 1037 385 428 459.200
; assembly_13 versus Zm00001d002364_MA1832.1_JASPAR_rc (Zm00001d002364:MA1832.1:JASPAR_rc); m=68/229; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 459.2; ----------ggCGGCGGCg ; cor=0.834; Ncor=0.695; logoDP=0.250; NsEucl=0.910; NSW=0.919; rcor=332; rNcor=114; rlogoDP=1037; rNsEucl=385; rNSW=428; rank_mean=459.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 2034 2750 0 0 0 0 0 0 903 2201 c 0 0 0 0 0 0 0 0 0 0 3763 3546 19090 0 0 19090 0 0 13670 3334 g 0 0 0 0 0 0 0 0 0 0 11352 11009 0 19090 19090 0 19090 19090 2981 11808 t 0 0 0 0 0 0 0 0 0 0 1941 1785 0 0 0 0 0 0 1536 1747

ERF13_MA1254.1_JASPAR_rc_shift8 (ERF13:MA1254.1:JASPAR_rc) 0.820 0.601 0.347 0.918 0.925 399 342 977 254 352 464.800
; assembly_13 versus ERF13_MA1254.1_JASPAR_rc (ERF13:MA1254.1:JASPAR_rc); m=69/229; ncol2=15; w=-1; offset=-1; strand=R; shift=8; score= 464.8; --------rwaayGGCGGCk ; cor=0.820; Ncor=0.601; logoDP=0.347; NsEucl=0.918; NSW=0.925; rcor=399; rNcor=342; rlogoDP=977; rNsEucl=254; rNSW=352; rank_mean=464.800; match_rank= a 0 0 0 0 0 0 0 0 178 253 267 345 103 0 32 0 0 0 0 1 c 0 0 0 0 0 0 0 0 77 127 37 16 151 0 0 567 0 0 567 28 g 0 0 0 0 0 0 0 0 231 47 126 124 7 570 518 0 570 570 0 300 t 0 0 0 0 0 0 0 0 84 143 140 85 309 0 20 3 0 0 3 241

RAP2-12_MA1256.2_JASPAR_shift10 (RAP2-12:MA1256.2:JASPAR) 0.784 0.653 4.589 0.903 0.905 586 184 440 543 585 467.600
; assembly_13 versus RAP2-12_MA1256.2_JASPAR (RAP2-12:MA1256.2:JASPAR); m=70/229; ncol2=11; w=0; offset=1; strand=D; shift=10; score= 467.6; ----------rryGGCGGCG ; cor=0.784; Ncor=0.653; logoDP=4.589; NsEucl=0.903; NSW=0.905; rcor=586; rNcor=184; rlogoDP=440; rNsEucl=543; rNSW=585; rank_mean=467.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 266 274 68 10 52 0 0 0 7 9 c 0 0 0 0 0 0 0 0 0 0 14 15 207 6 0 596 0 0 575 6 g 0 0 0 0 0 0 0 0 0 0 170 184 4 494 542 0 596 596 0 517 t 0 0 0 0 0 0 0 0 0 0 147 124 318 87 3 1 1 1 15 65

Rap2.6L_M0036_1.02_CISBP_rc_shift8 (Rap2.6L:M0036_1.02:CISBP_rc) 0.805 0.604 0.894 0.911 0.928 479 331 875 374 315 474.800
; assembly_13 versus Rap2.6L_M0036_1.02_CISBP_rc (Rap2.6L:M0036_1.02:CISBP_rc); m=71/229; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 474.8; --------wtkrCGGCks-- ; cor=0.805; Ncor=0.604; logoDP=0.894; NsEucl=0.911; NSW=0.928; rcor=479; rNcor=331; rlogoDP=875; rNsEucl=374; rNSW=315; rank_mean=474.800; match_rank= a 0 0 0 0 0 0 0 0 31 21 17 29 6 5 5 1 13 20 0 0 c 0 0 0 0 0 0 0 0 19 19 9 12 75 5 14 89 17 27 0 0 g 0 0 0 0 0 0 0 0 21 21 46 41 8 80 77 3 44 35 0 0 t 0 0 0 0 0 0 0 0 29 39 28 18 11 10 4 7 26 18 0 0

ERF8.ampDAP_M0046_AthalianaCistrome_shift5 (ERF8.ampDAP:M0046:AthalianaCistrome) 0.797 0.487 5.079 0.915 0.920 513 766 369 301 426 475.000
; assembly_13 versus ERF8.ampDAP_M0046_AthalianaCistrome (ERF8.ampDAP:M0046:AthalianaCistrome); m=72/229; ncol2=18; w=-4; offset=-4; strand=D; shift=5; score= 475; -----rwwwyGGCGGCGghg ; cor=0.797; Ncor=0.487; logoDP=5.079; NsEucl=0.915; NSW=0.920; rcor=513; rNcor=766; rlogoDP=369; rNsEucl=301; rNSW=426; rank_mean=475.000; match_rank= a 0 0 0 0 0 201 256 257 292 68 19 146 0 0 0 1 3 73 212 144 c 0 0 0 0 0 90 104 34 30 160 0 3 588 0 0 582 0 135 165 37 g 0 0 0 0 0 180 66 102 110 0 499 414 0 585 588 0 517 319 60 279 t 0 0 0 0 0 117 162 195 156 360 70 25 0 3 0 5 68 61 151 128

AT2G33710_M0018_1.02_CISBP_rc_shift9 (AT2G33710:M0018_1.02:CISBP_rc) 0.782 0.711 0.248 0.913 0.924 596 84 1040 325 362 481.400
; assembly_13 versus AT2G33710_M0018_1.02_CISBP_rc (AT2G33710:M0018_1.02:CISBP_rc); m=73/229; ncol2=10; w=0; offset=0; strand=R; shift=9; score= 481.4; ---------tggCGGCgsc- ; cor=0.782; Ncor=0.711; logoDP=0.248; NsEucl=0.913; NSW=0.924; rcor=596; rNcor=84; rlogoDP=1040; rNsEucl=325; rNSW=362; rank_mean=481.400; match_rank= a 0 0 0 0 0 0 0 0 0 15 7 21 3 0 0 7 5 11 18 0 c 0 0 0 0 0 0 0 0 0 24 4 10 90 0 0 92 12 35 39 0 g 0 0 0 0 0 0 0 0 0 13 66 52 3 96 100 0 61 44 24 0 t 0 0 0 0 0 0 0 0 0 48 23 17 4 4 0 1 22 10 19 0

ERF5_MA1225.1_JASPAR_rc_shift9 (ERF5:MA1225.1:JASPAR_rc) 0.801 0.588 1.664 0.914 0.918 497 398 773 315 443 485.200
; assembly_13 versus ERF5_MA1225.1_JASPAR_rc (ERF5:MA1225.1:JASPAR_rc); m=74/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 485.2; ---------yGGCGGCGGcG ; cor=0.801; Ncor=0.588; logoDP=1.664; NsEucl=0.914; NSW=0.918; rcor=497; rNcor=398; rlogoDP=773; rNsEucl=315; rNSW=443; rank_mean=485.200; match_rank= a 0 0 0 0 0 0 0 0 0 106 72 142 42 0 19 9 0 16 129 23 c 0 0 0 0 0 0 0 0 0 219 29 17 465 0 20 503 0 32 370 5 g 0 0 0 0 0 0 0 0 0 17 424 418 0 576 537 0 564 529 0 494 t 0 0 0 0 0 0 0 0 0 238 55 3 73 4 4 68 16 3 81 58

ERF112_MA1002.1_JASPAR_rc_shift9 (ERF112:MA1002.1:JASPAR_rc) 0.781 0.710 0.249 0.913 0.924 608 91 1038 327 367 486.200
; assembly_13 versus ERF112_MA1002.1_JASPAR_rc (ERF112:MA1002.1:JASPAR_rc); m=75/229; ncol2=10; w=0; offset=0; strand=R; shift=9; score= 486.2; ---------tggCGGCgsc- ; cor=0.781; Ncor=0.710; logoDP=0.249; NsEucl=0.913; NSW=0.924; rcor=608; rNcor=91; rlogoDP=1038; rNsEucl=327; rNSW=367; rank_mean=486.200; match_rank= a 0 0 0 0 0 0 0 0 0 150 67 211 33 3 1 72 54 118 180 0 c 0 0 0 0 0 0 0 0 0 240 37 101 903 4 2 913 117 346 392 0 g 0 0 0 0 0 0 0 0 0 133 661 518 28 951 997 1 605 436 240 0 t 0 0 0 0 0 0 0 0 0 478 236 171 36 42 0 15 223 100 189 0

AT5G23930_UN0357.1_JASPAR_rc_shift11 (AT5G23930:UN0357.1:JASPAR_rc) 0.817 0.613 3.827 0.899 0.908 413 298 540 624 556 486.200
; assembly_13 versus AT5G23930_UN0357.1_JASPAR_rc (AT5G23930:UN0357.1:JASPAR_rc); m=76/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 486.2; -----------ryGGCGGCk ; cor=0.817; Ncor=0.613; logoDP=3.827; NsEucl=0.899; NSW=0.908; rcor=413; rNcor=298; rlogoDP=540; rNsEucl=624; rNSW=556; rank_mean=486.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 598 296 0 0 0 0 0 0 125 c 0 0 0 0 0 0 0 0 0 0 0 249 1135 0 0 2074 0 0 2074 91 g 0 0 0 0 0 0 0 0 0 0 0 1036 43 2074 2074 0 2074 2074 0 1323 t 0 0 0 0 0 0 0 0 0 0 0 191 600 0 0 0 0 0 0 535

ERF11_MA1001.1_JASPAR_rc_shift8 (ERF11:MA1001.1:JASPAR_rc) 0.798 0.598 1.012 0.910 0.927 509 357 850 392 332 488.000
; assembly_13 versus ERF11_MA1001.1_JASPAR_rc (ERF11:MA1001.1:JASPAR_rc); m=77/229; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 488; --------wtkrCGGCgs-- ; cor=0.798; Ncor=0.598; logoDP=1.012; NsEucl=0.910; NSW=0.927; rcor=509; rNcor=357; rlogoDP=850; rNsEucl=392; rNSW=332; rank_mean=488.000; match_rank= a 0 0 0 0 0 0 0 0 324 233 175 273 31 99 85 4 169 165 0 0 c 0 0 0 0 0 0 0 0 204 181 77 154 828 51 55 887 123 316 0 0 g 0 0 0 0 0 0 0 0 196 162 490 383 10 704 835 0 494 313 0 0 t 0 0 0 0 0 0 0 0 276 424 258 190 131 145 25 109 213 206 0 0

LEP_MA1246.1_JASPAR_rc_shift1 (LEP:MA1246.1:JASPAR_rc) 0.855 0.448 0.362 0.926 0.939 242 900 973 156 193 492.800
; assembly_13 versus LEP_MA1246.1_JASPAR_rc (LEP:MA1246.1:JASPAR_rc); m=78/229; ncol2=21; w=-8; offset=-8; strand=R; shift=1; score= 492.8; -ggcggydgygrCGGCGGmG ; cor=0.855; Ncor=0.448; logoDP=0.362; NsEucl=0.926; NSW=0.939; rcor=242; rNcor=900; rlogoDP=973; rNsEucl=156; rNSW=193; rank_mean=492.800; match_rank= a 0 100 111 116 80 121 122 127 95 111 90 157 7 1 10 8 0 36 172 32 c 0 44 51 222 48 56 187 41 44 146 22 20 460 0 0 456 0 52 226 9 g 0 278 240 80 254 252 56 189 232 27 303 301 0 489 480 0 488 398 23 413 t 0 68 88 72 108 61 125 133 119 206 75 12 23 0 0 26 2 4 69 36

ERF008_MA0979.1_JASPAR_rc_shift12 (ERF008:MA0979.1:JASPAR_rc) 0.805 0.585 2.207 0.904 0.926 478 408 734 513 337 494.000
; assembly_13 versus ERF008_MA0979.1_JASPAR_rc (ERF008:MA0979.1:JASPAR_rc); m=79/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 494; ------------sGkCGGyG ; cor=0.805; Ncor=0.585; logoDP=2.207; NsEucl=0.904; NSW=0.926; rcor=478; rNcor=408; rlogoDP=734; rNsEucl=513; rNSW=337; rank_mean=494.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 154 34 101 26 8 26 17 41 c 0 0 0 0 0 0 0 0 0 0 0 0 329 68 56 865 19 58 634 24 g 0 0 0 0 0 0 0 0 0 0 0 0 417 828 524 44 934 889 15 787 t 0 0 0 0 0 0 0 0 0 0 0 0 100 70 320 66 39 27 335 148

ERF4.ampDAP_M0033_AthalianaCistrome_shift4 (ERF4.ampDAP:M0033:AthalianaCistrome) 0.803 0.442 5.349 0.914 0.919 489 923 321 310 437 496.000
; assembly_13 versus ERF4.ampDAP_M0033_AthalianaCistrome (ERF4.ampDAP:M0033:AthalianaCistrome); m=80/229; ncol2=20; w=-5; offset=-5; strand=D; shift=4; score= 496; ----rrwwayGRCGGCGgmg ; cor=0.803; Ncor=0.442; logoDP=5.349; NsEucl=0.914; NSW=0.919; rcor=489; rNcor=923; rlogoDP=321; rNsEucl=310; rNSW=437; rank_mean=496.000; match_rank= a 0 0 0 0 149 194 242 246 299 71 20 156 1 0 1 0 0 45 228 135 c 0 0 0 0 92 88 111 28 24 153 1 0 581 0 0 582 0 145 153 39 g 0 0 0 0 233 203 65 110 122 4 516 406 0 582 581 0 538 342 76 309 t 0 0 0 0 108 97 164 198 137 354 45 20 0 0 0 0 44 50 125 99

ERF077_MA1240.2_JASPAR_rc_shift11 (ERF077:MA1240.2:JASPAR_rc) 0.811 0.608 3.365 0.900 0.910 451 311 596 601 527 497.200
; assembly_13 versus ERF077_MA1240.2_JASPAR_rc (ERF077:MA1240.2:JASPAR_rc); m=81/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 497.2; -----------ryGGCGGCG ; cor=0.811; Ncor=0.608; logoDP=3.365; NsEucl=0.900; NSW=0.910; rcor=451; rNcor=311; rlogoDP=596; rNsEucl=601; rNSW=527; rank_mean=497.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 175 53 9 55 0 0 0 85 4 c 0 0 0 0 0 0 0 0 0 0 0 42 323 0 0 544 0 0 448 6 g 0 0 0 0 0 0 0 0 0 0 0 310 0 528 511 0 571 571 0 538 t 0 0 0 0 0 0 0 0 0 0 0 44 195 34 5 27 0 0 38 23

EREB149_B73_1_m1_EEAD0335_EEADannot_shift12 (EREB149_B73_1_m1:EEAD0335:EEADannot) 0.860 0.405 3.207 0.911 0.936 221 1063 620 370 220 498.800
; assembly_13 versus EREB149_B73_1_m1_EEAD0335_EEADannot (EREB149_B73_1_m1:EEAD0335:EEADannot); m=82/229; ncol2=14; w=0; offset=3; strand=D; shift=12; score= 498.8; ------------CGGCGGCG ; cor=0.860; Ncor=0.405; logoDP=3.207; NsEucl=0.911; NSW=0.936; rcor=221; rNcor=1063; rlogoDP=620; rNsEucl=370; rNSW=220; rank_mean=498.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 3 3 14 3 3 15 2 1 c 0 0 0 0 0 0 0 0 0 0 0 0 79 4 2 84 2 4 85 1 g 0 0 0 0 0 0 0 0 0 0 0 0 4 87 81 2 92 79 3 94 t 0 0 0 0 0 0 0 0 0 0 0 0 14 6 3 11 3 2 10 4

ERF11_M0009_1.02_CISBP_rc_shift8 (ERF11:M0009_1.02:CISBP_rc) 0.795 0.596 1.008 0.909 0.926 530 365 851 405 344 499.000
; assembly_13 versus ERF11_M0009_1.02_CISBP_rc (ERF11:M0009_1.02:CISBP_rc); m=83/229; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 499; --------wtkrCGGCgs-- ; cor=0.795; Ncor=0.596; logoDP=1.008; NsEucl=0.909; NSW=0.926; rcor=530; rNcor=365; rlogoDP=851; rNsEucl=405; rNSW=344; rank_mean=499.000; match_rank= a 0 0 0 0 0 0 0 0 32 23 17 27 3 10 9 0 17 17 0 0 c 0 0 0 0 0 0 0 0 20 18 8 15 83 5 6 89 13 31 0 0 g 0 0 0 0 0 0 0 0 20 17 49 38 1 70 83 0 49 31 0 0 t 0 0 0 0 0 0 0 0 28 42 26 20 13 15 2 11 21 21 0 0

CRF3_M0041_1.02_CISBP_rc_shift9 (CRF3:M0041_1.02:CISBP_rc) 0.784 0.642 0.880 0.907 0.922 585 211 879 448 387 502.000
; assembly_13 versus CRF3_M0041_1.02_CISBP_rc (CRF3:M0041_1.02:CISBP_rc); m=84/229; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 502; ---------tggcGGCgs-- ; cor=0.784; Ncor=0.642; logoDP=0.880; NsEucl=0.907; NSW=0.922; rcor=585; rNcor=211; rlogoDP=879; rNsEucl=448; rNSW=387; rank_mean=502.000; match_rank= a 0 0 0 0 0 0 0 0 0 21 19 24 11 7 5 0 14 20 0 0 c 0 0 0 0 0 0 0 0 0 21 13 14 62 6 5 94 16 30 0 0 g 0 0 0 0 0 0 0 0 0 24 46 42 10 78 88 0 48 31 0 0 t 0 0 0 0 0 0 0 0 0 34 22 20 17 9 2 6 22 19 0 0

ERF096_MA0998.2_JASPAR_rc_shift13 (ERF096:MA0998.2:JASPAR_rc) 0.872 0.476 2.450 0.899 0.939 178 799 724 617 200 503.600
; assembly_13 versus ERF096_MA0998.2_JASPAR_rc (ERF096:MA0998.2:JASPAR_rc); m=85/229; ncol2=6; w=0; offset=4; strand=R; shift=13; score= 503.6; -------------GgCGGC- ; cor=0.872; Ncor=0.476; logoDP=2.450; NsEucl=0.899; NSW=0.939; rcor=178; rNcor=799; rlogoDP=724; rNsEucl=617; rNSW=200; rank_mean=503.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 38 149 19 32 27 13 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 24 131 928 21 36 939 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 903 591 10 850 905 13 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 35 129 43 97 32 34 0

ERF13_MA1004.1_JASPAR_rc_shift12 (ERF13:MA1004.1:JASPAR_rc) 0.813 0.592 3.328 0.898 0.916 433 383 601 641 462 504.000
; assembly_13 versus ERF13_MA1004.1_JASPAR_rc (ERF13:MA1004.1:JASPAR_rc); m=86/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 504; ------------yGgCGGCs ; cor=0.813; Ncor=0.592; logoDP=3.328; NsEucl=0.898; NSW=0.916; rcor=433; rNcor=383; rlogoDP=601; rNsEucl=641; rNSW=462; rank_mean=504.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 154 0 113 0 0 0 0 22 c 0 0 0 0 0 0 0 0 0 0 0 0 282 0 145 983 16 32 951 283 g 0 0 0 0 0 0 0 0 0 0 0 0 103 999 645 16 983 951 49 478 t 0 0 0 0 0 0 0 0 0 0 0 0 461 0 97 0 0 16 0 217

ERF073_MA1754.2_JASPAR_rc_shift9 (ERF073:MA1754.2:JASPAR_rc) 0.759 0.759 4.160 0.902 0.894 720 39 496 564 709 505.600
; assembly_13 versus ERF073_MA1754.2_JASPAR_rc (ERF073:MA1754.2:JASPAR_rc); m=87/229; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 505.6; ---------yGGCGGCGGmg ; cor=0.759; Ncor=0.759; logoDP=4.160; NsEucl=0.902; NSW=0.894; rcor=720; rNcor=39; rlogoDP=496; rNsEucl=564; rNSW=709; rank_mean=505.600; match_rank= a 0 0 0 0 0 0 0 0 0 114 55 52 12 0 7 0 0 69 366 142 c 0 0 0 0 0 0 0 0 0 380 14 0 975 0 0 968 0 155 377 28 g 0 0 0 0 0 0 0 0 0 0 837 948 0 1000 993 0 975 742 89 648 t 0 0 0 0 0 0 0 0 0 506 94 0 12 0 0 32 25 34 169 181

ERF105_MA1000.3_JASPAR_shift11 (ERF105:MA1000.3:JASPAR) 0.802 0.602 5.338 0.894 0.898 492 339 326 712 667 507.200
; assembly_13 versus ERF105_MA1000.3_JASPAR (ERF105:MA1000.3:JASPAR); m=88/229; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 507.2; -----------ryGGCGGCG ; cor=0.802; Ncor=0.602; logoDP=5.338; NsEucl=0.894; NSW=0.898; rcor=492; rNcor=339; rlogoDP=326; rNsEucl=712; rNSW=667; rank_mean=507.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 189 50 0 21 1 0 0 21 1 c 0 0 0 0 0 0 0 0 0 0 0 37 307 0 0 569 0 1 544 0 g 0 0 0 0 0 0 0 0 0 0 0 312 0 586 565 0 586 585 0 523 t 0 0 0 0 0 0 0 0 0 0 0 48 229 0 0 16 0 0 21 62

ATERF13_M0020_1.02_CISBP_rc_shift12 (ATERF13:M0020_1.02:CISBP_rc) 0.812 0.590 3.291 0.897 0.916 445 388 609 645 469 511.200
; assembly_13 versus ATERF13_M0020_1.02_CISBP_rc (ATERF13:M0020_1.02:CISBP_rc); m=89/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 511.2; ------------yGgCGGCs ; cor=0.812; Ncor=0.590; logoDP=3.291; NsEucl=0.897; NSW=0.916; rcor=445; rNcor=388; rlogoDP=609; rNsEucl=645; rNSW=469; rank_mean=511.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 15 0 11 0 0 0 0 2 c 0 0 0 0 0 0 0 0 0 0 0 0 28 0 15 98 2 3 95 28 g 0 0 0 0 0 0 0 0 0 0 0 0 10 100 64 2 98 95 5 48 t 0 0 0 0 0 0 0 0 0 0 0 0 47 0 10 0 0 2 0 22

ERF4.DAP_M0047_AthalianaCistrome_rc_shift6 (ERF4.DAP:M0047:AthalianaCistrome_rc) 0.797 0.585 2.562 0.909 0.909 512 412 712 408 534 515.600
; assembly_13 versus ERF4.DAP_M0047_AthalianaCistrome_rc (ERF4.DAP:M0047:AthalianaCistrome_rc); m=90/229; ncol2=15; w=-3; offset=-3; strand=R; shift=6; score= 515.6; ------wdryGGCGGCGGmG ; cor=0.797; Ncor=0.585; logoDP=2.562; NsEucl=0.909; NSW=0.909; rcor=512; rNcor=412; rlogoDP=712; rNsEucl=408; rNSW=534; rank_mean=515.600; match_rank= a 0 0 0 0 0 0 231 216 260 71 12 128 0 1 0 3 2 21 237 90 c 0 0 0 0 0 0 123 26 25 170 2 0 596 0 1 591 0 103 195 21 g 0 0 0 0 0 0 71 153 182 3 531 463 0 595 596 0 583 454 53 407 t 0 0 0 0 0 0 172 202 130 353 52 6 1 1 0 3 12 19 112 79

ERF069_MA0997.1_JASPAR_rc_shift9 (ERF069:MA0997.1:JASPAR_rc) 0.775 0.634 1.117 0.906 0.920 642 228 834 471 420 519.000
; assembly_13 versus ERF069_MA0997.1_JASPAR_rc (ERF069:MA0997.1:JASPAR_rc); m=91/229; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 519; ---------tggCGGCgs-- ; cor=0.775; Ncor=0.634; logoDP=1.117; NsEucl=0.906; NSW=0.920; rcor=642; rNcor=228; rlogoDP=834; rNsEucl=471; rNSW=420; rank_mean=519.000; match_rank= a 0 0 0 0 0 0 0 0 0 209 180 230 0 146 24 0 157 197 0 0 c 0 0 0 0 0 0 0 0 0 231 193 212 820 76 86 982 175 315 0 0 g 0 0 0 0 0 0 0 0 0 209 404 419 0 680 828 0 471 294 0 0 t 0 0 0 0 0 0 0 0 0 351 224 138 179 98 61 18 197 193 0 0

ERF2_MA1262.2_JASPAR_rc_shift11 (ERF2:MA1262.2:JASPAR_rc) 0.842 0.505 1.337 0.908 0.924 293 701 804 425 374 519.400
; assembly_13 versus ERF2_MA1262.2_JASPAR_rc (ERF2:MA1262.2:JASPAR_rc); m=92/229; ncol2=13; w=0; offset=2; strand=R; shift=11; score= 519.4; -----------ryGGCGGCG ; cor=0.842; Ncor=0.505; logoDP=1.337; NsEucl=0.908; NSW=0.924; rcor=293; rNcor=701; rlogoDP=804; rNsEucl=425; rNSW=374; rank_mean=519.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 212 65 0 30 2 0 2 44 17 c 0 0 0 0 0 0 0 0 0 0 0 52 353 0 0 550 0 0 509 9 g 0 0 0 0 0 0 0 0 0 0 0 305 0 595 565 0 588 590 0 451 t 0 0 0 0 0 0 0 0 0 0 0 26 177 0 0 43 7 3 42 118

ERF104.ampDAP_M0130_AthalianaCistrome_shift9 (ERF104.ampDAP:M0130:AthalianaCistrome) 0.768 0.563 5.190 0.906 0.902 677 489 347 468 617 519.600
; assembly_13 versus ERF104.ampDAP_M0130_AthalianaCistrome (ERF104.ampDAP:M0130:AthalianaCistrome); m=93/229; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 519.6; ---------ygryGGCGGCG ; cor=0.768; Ncor=0.563; logoDP=5.190; NsEucl=0.906; NSW=0.902; rcor=677; rNcor=489; rlogoDP=347; rNsEucl=468; rNSW=617; rank_mean=519.600; match_rank= a 0 0 0 0 0 0 0 0 0 58 66 75 29 2 30 0 0 0 1 0 c 0 0 0 0 0 0 0 0 0 94 25 24 134 0 1 282 0 0 278 11 g 0 0 0 0 0 0 0 0 0 27 137 168 1 281 252 0 283 283 0 234 t 0 0 0 0 0 0 0 0 0 104 55 16 119 0 0 1 0 0 4 38

AT1G22985_M0007_1.02_CISBP_rc_shift9 (AT1G22985:M0007_1.02:CISBP_rc) 0.773 0.632 1.119 0.905 0.919 654 233 833 488 431 527.800
; assembly_13 versus AT1G22985_M0007_1.02_CISBP_rc (AT1G22985:M0007_1.02:CISBP_rc); m=94/229; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 527.8; ---------tggCGGCgs-- ; cor=0.773; Ncor=0.632; logoDP=1.119; NsEucl=0.905; NSW=0.919; rcor=654; rNcor=233; rlogoDP=833; rNsEucl=488; rNSW=431; rank_mean=527.800; match_rank= a 0 0 0 0 0 0 0 0 0 21 19 23 0 15 2 0 16 20 0 0 c 0 0 0 0 0 0 0 0 0 23 19 21 82 7 9 98 18 32 0 0 g 0 0 0 0 0 0 0 0 0 21 40 42 0 68 83 0 46 29 0 0 t 0 0 0 0 0 0 0 0 0 35 22 14 18 10 6 2 20 19 0 0

LOB_MA2022.2_JASPAR_rc_shift8 (LOB:MA2022.2:JASPAR_rc) 0.764 0.647 3.226 0.905 0.901 700 199 618 492 637 529.200
; assembly_13 versus LOB_MA2022.2_JASPAR_rc (LOB:MA2022.2:JASPAR_rc); m=95/229; ncol2=13; w=-1; offset=-1; strand=R; shift=8; score= 529.2; --------gckGCGGCGGCG ; cor=0.764; Ncor=0.647; logoDP=3.226; NsEucl=0.905; NSW=0.901; rcor=700; rNcor=199; rlogoDP=618; rNsEucl=492; rNSW=637; rank_mean=529.200; match_rank= a 0 0 0 0 0 0 0 0 113 101 103 50 24 27 16 23 24 18 133 86 c 0 0 0 0 0 0 0 0 71 532 44 38 733 8 7 729 4 10 552 24 g 0 0 0 0 0 0 0 0 538 33 398 693 1 721 768 4 739 760 18 569 t 0 0 0 0 0 0 0 0 73 129 250 14 37 39 4 39 28 7 92 116

Zm00001d005892_MA1819.1_JASPAR_rc_shift10 (Zm00001d005892:MA1819.1:JASPAR_rc) 0.781 0.601 3.117 0.904 0.908 606 346 628 514 557 530.200
; assembly_13 versus Zm00001d005892_MA1819.1_JASPAR_rc (Zm00001d005892:MA1819.1:JASPAR_rc); m=96/229; ncol2=12; w=0; offset=1; strand=R; shift=10; score= 530.2; ----------ggCGGCGGCG ; cor=0.781; Ncor=0.601; logoDP=3.117; NsEucl=0.904; NSW=0.908; rcor=606; rNcor=346; rlogoDP=628; rNsEucl=514; rNSW=557; rank_mean=530.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 3917 4805 990 748 1310 722 670 1200 765 872 c 0 0 0 0 0 0 0 0 0 0 6580 5911 24113 990 1696 25421 917 1794 25046 1309 g 0 0 0 0 0 0 0 0 0 0 13547 12889 1029 25022 23482 435 25251 23527 767 24431 t 0 0 0 0 0 0 0 0 0 0 3329 3768 1241 613 885 795 535 852 795 761

LOC_Os08g36920_M0044_1.02_CISBP_rc_shift9 (LOC_Os08g36920:M0044_1.02:CISBP_rc) 0.754 0.685 0.260 0.911 0.921 753 123 1033 356 402 533.400
; assembly_13 versus LOC_Os08g36920_M0044_1.02_CISBP_rc (LOC_Os08g36920:M0044_1.02:CISBP_rc); m=97/229; ncol2=10; w=0; offset=0; strand=R; shift=9; score= 533.4; ---------tkrCGsCgsv- ; cor=0.754; Ncor=0.685; logoDP=0.260; NsEucl=0.911; NSW=0.921; rcor=753; rNcor=123; rlogoDP=1033; rNsEucl=356; rNSW=402; rank_mean=533.400; match_rank= a 0 0 0 0 0 0 0 0 0 23 22 30 0 0 3 4 19 24 27 0 c 0 0 0 0 0 0 0 0 0 23 16 0 100 0 31 79 24 25 25 0 g 0 0 0 0 0 0 0 0 0 19 32 49 0 100 64 0 34 32 25 0 t 0 0 0 0 0 0 0 0 0 35 30 21 0 0 2 17 23 19 23 0

WIN1_MA1804.2_JASPAR_rc_shift14 (WIN1:MA1804.2:JASPAR_rc) 0.855 0.466 0.265 0.907 0.949 241 837 1028 440 136 536.400
; assembly_13 versus WIN1_MA1804.2_JASPAR_rc (WIN1:MA1804.2:JASPAR_rc); m=98/229; ncol2=6; w=0; offset=5; strand=R; shift=14; score= 536.4; --------------gCGGyG ; cor=0.855; Ncor=0.466; logoDP=0.265; NsEucl=0.907; NSW=0.949; rcor=241; rNcor=837; rlogoDP=1028; rNsEucl=440; rNSW=136; rank_mean=536.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 78 77 43 17 1 10 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 79 712 1 187 615 133 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 679 9 956 795 1 720 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 164 202 1 1 384 137

ERF8_MA0994.1_JASPAR_rc_shift7 (ERF8:MA0994.1:JASPAR_rc) 0.826 0.508 0.194 0.911 0.936 361 691 1062 373 222 541.800
; assembly_13 versus ERF8_MA0994.1_JASPAR_rc (ERF8:MA0994.1:JASPAR_rc); m=99/229; ncol2=10; w=-2; offset=-2; strand=R; shift=7; score= 541.8; -------wwtggCGGCg--- ; cor=0.826; Ncor=0.508; logoDP=0.194; NsEucl=0.911; NSW=0.936; rcor=361; rNcor=691; rlogoDP=1062; rNsEucl=373; rNSW=222; rank_mean=541.800; match_rank= a 0 0 0 0 0 0 0 311 336 192 139 243 31 48 19 3 129 0 0 0 c 0 0 0 0 0 0 0 192 185 184 58 151 841 31 64 959 97 0 0 0 g 0 0 0 0 0 0 0 206 206 175 605 452 53 807 908 0 572 0 0 0 t 0 0 0 0 0 0 0 290 273 449 197 154 75 114 9 38 202 0 0 0

0100010458_M0076_1.02_CISBP_rc_shift12 (0100010458:M0076_1.02:CISBP_rc) 0.807 0.587 3.751 0.892 0.907 466 401 554 737 560 543.600
; assembly_13 versus 0100010458_M0076_1.02_CISBP_rc (0100010458:M0076_1.02:CISBP_rc); m=100/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 543.6; ------------yGGCGGCg ; cor=0.807; Ncor=0.587; logoDP=3.751; NsEucl=0.892; NSW=0.907; rcor=466; rNcor=401; rlogoDP=554; rNsEucl=737; rNSW=560; rank_mean=543.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 7 0 6 0 0 0 0 8 c 0 0 0 0 0 0 0 0 0 0 0 0 32 0 21 100 2 8 100 14 g 0 0 0 0 0 0 0 0 0 0 0 0 3 100 71 0 98 92 0 60 t 0 0 0 0 0 0 0 0 0 0 0 0 58 0 2 0 0 0 0 18

ERF1B_MA0567.1_JASPAR_rc_shift12 (ERF1B:MA0567.1:JASPAR_rc) 0.814 0.592 3.314 0.892 0.906 429 377 602 749 575 546.400
; assembly_13 versus ERF1B_MA0567.1_JASPAR_rc (ERF1B:MA0567.1:JASPAR_rc); m=101/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 546.4; ------------tGGCGGCk ; cor=0.814; Ncor=0.592; logoDP=3.314; NsEucl=0.892; NSW=0.906; rcor=429; rNcor=377; rlogoDP=602; rNsEucl=749; rNSW=575; rank_mean=546.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 12 1 4 1 0 1 1 1 c 0 0 0 0 0 0 0 0 0 0 0 0 24 1 2 97 0 1 98 3 g 0 0 0 0 0 0 0 0 0 0 0 0 5 98 92 0 96 98 1 54 t 0 0 0 0 0 0 0 0 0 0 0 0 58 1 2 2 4 0 1 42

EREB2_B73_1_m1_EEAD0345_EEADannot_rc_shift9 (EREB2_B73_1_m1:EEAD0345:EEADannot_rc) 0.746 0.746 3.727 0.900 0.891 792 47 556 590 748 546.600
; assembly_13 versus EREB2_B73_1_m1_EEAD0345_EEADannot_rc (EREB2_B73_1_m1:EEAD0345:EEADannot_rc); m=102/229; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 546.6; ---------cGRCGGCGGCG ; cor=0.746; Ncor=0.746; logoDP=3.727; NsEucl=0.900; NSW=0.891; rcor=792; rNcor=47; rlogoDP=556; rNsEucl=590; rNSW=748; rank_mean=546.600; match_rank= a 0 0 0 0 0 0 0 0 0 6 7 26 6 0 12 0 0 12 6 7 c 0 0 0 0 0 0 0 0 0 65 4 0 83 0 3 96 0 4 80 2 g 0 0 0 0 0 0 0 0 0 12 87 70 1 100 77 0 100 78 6 88 t 0 0 0 0 0 0 0 0 0 17 2 4 10 0 8 4 0 6 8 3

ATERF-8_M0012_1.02_CISBP_rc_shift7 (ATERF-8:M0012_1.02:CISBP_rc) 0.825 0.508 0.198 0.910 0.936 370 695 1060 381 230 547.200
; assembly_13 versus ATERF-8_M0012_1.02_CISBP_rc (ATERF-8:M0012_1.02:CISBP_rc); m=103/229; ncol2=10; w=-2; offset=-2; strand=R; shift=7; score= 547.2; -------wwtggCGGCg--- ; cor=0.825; Ncor=0.508; logoDP=0.198; NsEucl=0.910; NSW=0.936; rcor=370; rNcor=695; rlogoDP=1060; rNsEucl=381; rNSW=230; rank_mean=547.200; match_rank= a 0 0 0 0 0 0 0 31 34 19 14 24 3 5 2 0 13 0 0 0 c 0 0 0 0 0 0 0 19 18 18 6 15 85 3 6 96 10 0 0 0 g 0 0 0 0 0 0 0 21 21 18 60 46 5 81 91 0 57 0 0 0 t 0 0 0 0 0 0 0 29 27 45 20 15 7 11 1 4 20 0 0 0

ERF2_MA1262.1_JASPAR_rc_shift9 (ERF2:MA1262.1:JASPAR_rc) 0.834 0.437 0.264 0.922 0.933 331 936 1030 196 255 549.600
; assembly_13 versus ERF2_MA1262.1_JASPAR_rc (ERF2:MA1262.1:JASPAR_rc); m=104/229; ncol2=21; w=0; offset=0; strand=R; shift=9; score= 549.6; ---------ygryGGCGGCG ; cor=0.834; Ncor=0.437; logoDP=0.264; NsEucl=0.922; NSW=0.933; rcor=331; rNcor=936; rlogoDP=1030; rNsEucl=196; rNSW=255; rank_mean=549.600; match_rank= a 0 0 0 0 0 0 0 0 0 136 144 212 65 0 30 2 0 2 44 17 c 0 0 0 0 0 0 0 0 0 212 78 52 353 0 0 550 0 0 509 9 g 0 0 0 0 0 0 0 0 0 29 251 305 0 595 565 0 588 590 0 451 t 0 0 0 0 0 0 0 0 0 218 122 26 177 0 0 43 7 3 42 118

RAP211_MA1266.1_JASPAR_rc_shift9 (RAP211:MA1266.1:JASPAR_rc) 0.772 0.566 0.969 0.913 0.917 655 474 862 319 447 551.400
; assembly_13 versus RAP211_MA1266.1_JASPAR_rc (RAP211:MA1266.1:JASPAR_rc); m=105/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 551.4; ---------mGmCGGCgrhg ; cor=0.772; Ncor=0.566; logoDP=0.969; NsEucl=0.913; NSW=0.917; rcor=655; rNcor=474; rlogoDP=862; rNsEucl=319; rNSW=447; rank_mean=551.400; match_rank= a 0 0 0 0 0 0 0 0 0 161 28 147 0 0 0 24 83 208 163 119 c 0 0 0 0 0 0 0 0 0 193 0 329 588 0 0 539 71 42 220 41 g 0 0 0 0 0 0 0 0 0 132 560 112 0 588 588 0 373 323 42 342 t 0 0 0 0 0 0 0 0 0 102 0 0 0 0 0 25 61 15 163 86

EREB29_B73_1_m1_EEAD0343_EEADannot_rc_shift9 (EREB29_B73_1_m1:EEAD0343:EEADannot_rc) 0.749 0.749 3.567 0.900 0.889 775 44 575 604 766 552.800
; assembly_13 versus EREB29_B73_1_m1_EEAD0343_EEADannot_rc (EREB29_B73_1_m1:EEAD0343:EEADannot_rc); m=106/229; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 552.8; ---------cGrCGGCGGCG ; cor=0.749; Ncor=0.749; logoDP=3.567; NsEucl=0.900; NSW=0.889; rcor=775; rNcor=44; rlogoDP=575; rNsEucl=604; rNSW=766; rank_mean=552.800; match_rank= a 0 0 0 0 0 0 0 0 0 8 4 27 4 2 13 0 1 14 4 7 c 0 0 0 0 0 0 0 0 0 64 6 3 85 0 0 94 0 3 82 0 g 0 0 0 0 0 0 0 0 0 13 87 66 1 98 83 0 99 82 6 93 t 0 0 0 0 0 0 0 0 0 15 3 4 10 0 4 6 0 1 8 0

ERF9.ampDAP_M0096_AthalianaCistrome_rc_shift5 (ERF9.ampDAP:M0096:AthalianaCistrome_rc) 0.795 0.514 2.500 0.911 0.912 526 665 717 376 501 557.000
; assembly_13 versus ERF9.ampDAP_M0096_AthalianaCistrome_rc (ERF9.ampDAP:M0096:AthalianaCistrome_rc); m=107/229; ncol2=17; w=-4; offset=-4; strand=R; shift=5; score= 557; -----rwwatGGCGGCGgmg ; cor=0.795; Ncor=0.514; logoDP=2.500; NsEucl=0.911; NSW=0.912; rcor=526; rNcor=665; rlogoDP=717; rNsEucl=376; rNSW=501; rank_mean=557.000; match_rank= a 0 0 0 0 0 212 256 274 304 85 7 140 0 0 0 0 0 27 214 126 c 0 0 0 0 0 74 92 23 20 107 0 0 572 0 0 571 4 141 184 32 g 0 0 0 0 0 203 70 86 112 1 523 420 0 572 572 0 537 375 57 316 t 0 0 0 0 0 83 154 189 136 379 42 12 0 0 0 1 31 29 117 98

ERF15_MA1231.2_JASPAR_rc_shift10 (ERF15:MA1231.2:JASPAR_rc) 0.815 0.543 0.174 0.912 0.922 420 560 1069 351 395 559.000
; assembly_13 versus ERF15_MA1231.2_JASPAR_rc (ERF15:MA1231.2:JASPAR_rc); m=108/229; ncol2=14; w=0; offset=1; strand=R; shift=10; score= 559; ----------rrhGGCGGCk ; cor=0.815; Ncor=0.543; logoDP=0.174; NsEucl=0.912; NSW=0.922; rcor=420; rNcor=560; rlogoDP=1069; rNsEucl=351; rNSW=395; rank_mean=559.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 581 754 581 8 39 12 9 5 18 87 c 0 0 0 0 0 0 0 0 0 0 348 236 911 8 14 2067 3 1 2078 94 g 0 0 0 0 0 0 0 0 0 0 695 929 62 2107 2066 3 2062 2124 7 942 t 0 0 0 0 0 0 0 0 0 0 509 214 579 10 14 51 59 3 30 1010

AT3G10030.ampDAP_M0779_AthalianaCistrome_shift6 (AT3G10030.ampDAP:M0779:AthalianaCistrome) 0.759 0.556 3.800 0.907 0.906 721 516 547 439 580 560.600
; assembly_13 versus AT3G10030.ampDAP_M0779_AthalianaCistrome (AT3G10030.ampDAP:M0779:AthalianaCistrome); m=109/229; ncol2=15; w=-3; offset=-3; strand=D; shift=6; score= 560.6; ------arTTAACGGcgktw ; cor=0.759; Ncor=0.556; logoDP=3.800; NsEucl=0.907; NSW=0.906; rcor=721; rNcor=516; rlogoDP=547; rNsEucl=439; rNSW=580; rank_mean=560.600; match_rank= a 0 0 0 0 0 0 277 159 53 6 533 596 0 32 45 112 68 92 63 270 c 0 0 0 0 0 0 147 62 58 0 3 0 597 4 30 392 42 27 122 21 g 0 0 0 0 0 0 41 241 57 0 58 1 0 559 477 5 391 167 28 92 t 0 0 0 0 0 0 132 135 429 591 3 0 0 2 45 88 96 311 384 214

PK19363.1_M0004_1.02_CISBP_rc_shift9 (PK19363.1:M0004_1.02:CISBP_rc) 0.793 0.577 2.578 0.895 0.912 535 435 708 684 498 572.000
; assembly_13 versus PK19363.1_M0004_1.02_CISBP_rc (PK19363.1:M0004_1.02:CISBP_rc); m=110/229; ncol2=8; w=0; offset=0; strand=R; shift=9; score= 572; ---------yGgCGGCG--- ; cor=0.793; Ncor=0.577; logoDP=2.578; NsEucl=0.895; NSW=0.912; rcor=535; rNcor=435; rlogoDP=708; rNsEucl=684; rNSW=498; rank_mean=572.000; match_rank= a 0 0 0 0 0 0 0 0 0 14 6 18 0 0 0 1 5 0 0 0 c 0 0 0 0 0 0 0 0 0 30 1 14 99 1 11 95 8 0 0 0 g 0 0 0 0 0 0 0 0 0 7 77 63 1 97 87 1 72 0 0 0 t 0 0 0 0 0 0 0 0 0 49 16 5 0 2 2 3 15 0 0 0

EREB29_Mo17_1_EEAD0344_EEADannot_shift9 (EREB29_Mo17_1:EEAD0344:EEADannot) 0.736 0.736 4.929 0.895 0.878 850 58 401 703 863 575.000
; assembly_13 versus EREB29_Mo17_1_EEAD0344_EEADannot (EREB29_Mo17_1:EEAD0344:EEADannot); m=111/229; ncol2=11; w=0; offset=0; strand=D; shift=9; score= 575; ---------cGGCGGCGGCG ; cor=0.736; Ncor=0.736; logoDP=4.929; NsEucl=0.895; NSW=0.878; rcor=850; rNcor=58; rlogoDP=401; rNsEucl=703; rNSW=863; rank_mean=575.000; match_rank= a 0 0 0 0 0 0 0 0 0 10 4 19 4 0 11 2 0 3 9 7 c 0 0 0 0 0 0 0 0 0 65 1 0 85 0 0 96 0 8 80 2 g 0 0 0 0 0 0 0 0 0 7 94 78 0 99 87 0 99 86 5 88 t 0 0 0 0 0 0 0 0 0 18 1 3 11 1 2 2 1 3 6 3

RAP212_MA1256.1_JASPAR_shift3 (RAP212:MA1256.1:JASPAR) 0.785 0.411 4.591 0.911 0.914 577 1035 439 353 489 578.600
; assembly_13 versus RAP212_MA1256.1_JASPAR (RAP212:MA1256.1:JASPAR); m=112/229; ncol2=21; w=-6; offset=-6; strand=D; shift=3; score= 578.6; ---cgghgrwrryGGCGGCG ; cor=0.785; Ncor=0.411; logoDP=4.591; NsEucl=0.911; NSW=0.914; rcor=577; rNcor=1035; rlogoDP=439; rNsEucl=353; rNSW=489; rank_mean=578.600; match_rank= a 0 0 0 127 133 140 159 133 191 244 266 274 68 10 52 0 0 0 7 9 c 0 0 0 224 64 86 192 83 72 131 14 15 207 6 0 596 0 0 575 6 g 0 0 0 119 286 276 90 250 250 52 170 184 4 494 542 0 596 596 0 517 t 0 0 0 127 114 95 156 131 84 170 147 124 318 87 3 1 1 1 15 65

GRF4_EEAD0016_EEADannot_rc_shift9 (GRF4:EEAD0016:EEADannot_rc) 0.739 0.677 2.716 0.902 0.895 820 135 692 553 696 579.200
; assembly_13 versus GRF4_EEAD0016_EEADannot_rc (GRF4:EEAD0016:EEADannot_rc); m=113/229; ncol2=12; w=0; offset=0; strand=R; shift=9; score= 579.2; ---------cgGCGGCGGCg ; cor=0.739; Ncor=0.677; logoDP=2.716; NsEucl=0.902; NSW=0.895; rcor=820; rNcor=135; rlogoDP=692; rNsEucl=553; rNSW=696; rank_mean=579.200; match_rank= a 0 0 0 0 0 0 0 0 0 111 113 32 33 28 17 19 33 24 24 111 c 0 0 0 0 0 0 0 0 0 441 159 38 722 32 21 741 28 35 704 137 g 0 0 0 0 0 0 0 0 0 147 447 697 15 715 738 13 707 723 32 463 t 0 0 0 0 0 0 0 0 0 97 77 29 26 21 20 23 28 14 36 85

RAP2-11_MA1266.2_JASPAR_rc_shift10 (RAP2-11:MA1266.2:JASPAR_rc) 0.775 0.646 0.201 0.906 0.911 644 204 1059 478 518 580.600
; assembly_13 versus RAP2-11_MA1266.2_JASPAR_rc (RAP2-11:MA1266.2:JASPAR_rc); m=114/229; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 580.6; ----------GmCGGCgrhg ; cor=0.775; Ncor=0.646; logoDP=0.201; NsEucl=0.906; NSW=0.911; rcor=644; rNcor=204; rlogoDP=1059; rNsEucl=478; rNSW=518; rank_mean=580.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 28 147 0 0 0 24 83 208 163 119 c 0 0 0 0 0 0 0 0 0 0 0 329 588 0 0 539 71 42 220 41 g 0 0 0 0 0 0 0 0 0 0 560 112 0 588 588 0 373 323 42 342 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 61 15 163 86

AT1G71450.ampDAP_M0064_AthalianaCistrome_rc_shift8 (AT1G71450.ampDAP:M0064:AthalianaCistrome_rc) 0.722 0.611 2.712 0.907 0.906 926 302 694 441 584 589.400
; assembly_13 versus AT1G71450.ampDAP_M0064_AthalianaCistrome_rc (AT1G71450.ampDAP:M0064:AthalianaCistrome_rc); m=115/229; ncol2=13; w=-1; offset=-1; strand=R; shift=8; score= 589.4; --------dyGwCGGyGrhg ; cor=0.722; Ncor=0.611; logoDP=2.712; NsEucl=0.907; NSW=0.906; rcor=926; rNcor=302; rlogoDP=694; rNsEucl=441; rNSW=584; rank_mean=589.400; match_rank= a 0 0 0 0 0 0 0 0 174 91 30 245 0 0 0 51 73 198 167 129 c 0 0 0 0 0 0 0 0 41 153 0 11 539 0 0 164 0 70 154 26 g 0 0 0 0 0 0 0 0 191 27 525 121 0 557 557 0 441 206 70 283 t 0 0 0 0 0 0 0 0 151 286 2 180 18 0 0 342 43 83 166 119

ATERF-1_M0028_1.02_CISBP_rc_shift9 (ATERF-1:M0028_1.02:CISBP_rc) 0.755 0.618 0.771 0.902 0.914 740 280 892 551 486 589.800
; assembly_13 versus ATERF-1_M0028_1.02_CISBP_rc (ATERF-1:M0028_1.02:CISBP_rc); m=116/229; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 589.8; ---------kGrcGGCks-- ; cor=0.755; Ncor=0.618; logoDP=0.771; NsEucl=0.902; NSW=0.914; rcor=740; rNcor=280; rlogoDP=892; rNsEucl=551; rNSW=486; rank_mean=589.800; match_rank= a 0 0 0 0 0 0 0 0 0 23 12 28 8 6 6 0 12 20 0 0 c 0 0 0 0 0 0 0 0 0 14 7 13 62 3 5 95 11 26 0 0 g 0 0 0 0 0 0 0 0 0 32 68 35 9 78 83 0 47 32 0 0 t 0 0 0 0 0 0 0 0 0 31 13 24 21 13 6 5 30 22 0 0

RAP2-10_MA0980.1_JASPAR_rc_shift13 (RAP2-10:MA0980.1:JASPAR_rc) 0.859 0.501 0.612 0.895 0.922 229 712 920 701 388 590.000
; assembly_13 versus RAP2-10_MA0980.1_JASPAR_rc (RAP2-10:MA0980.1:JASPAR_rc); m=117/229; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 590; -------------GGCGGCG ; cor=0.859; Ncor=0.501; logoDP=0.612; NsEucl=0.895; NSW=0.922; rcor=229; rNcor=712; rlogoDP=920; rNsEucl=701; rNSW=388; rank_mean=590.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 92 69 32 6 4 7 22 c 0 0 0 0 0 0 0 0 0 0 0 0 0 16 85 952 9 78 872 14 g 0 0 0 0 0 0 0 0 0 0 0 0 0 859 838 7 981 912 5 942 t 0 0 0 0 0 0 0 0 0 0 0 0 0 33 8 9 4 6 117 22

ATERF-7_M0023_1.02_CISBP_rc_shift7 (ATERF-7:M0023_1.02:CISBP_rc) 0.807 0.497 0.220 0.907 0.931 465 724 1050 447 280 593.200
; assembly_13 versus ATERF-7_M0023_1.02_CISBP_rc (ATERF-7:M0023_1.02:CISBP_rc); m=118/229; ncol2=10; w=-2; offset=-2; strand=R; shift=7; score= 593.2; -------wwtgrCGGCk--- ; cor=0.807; Ncor=0.497; logoDP=0.220; NsEucl=0.907; NSW=0.931; rcor=465; rNcor=724; rlogoDP=1050; rNsEucl=447; rNSW=280; rank_mean=593.200; match_rank= a 0 0 0 0 0 0 0 31 32 20 13 27 1 6 0 4 16 0 0 0 c 0 0 0 0 0 0 0 20 20 21 7 13 88 4 8 87 14 0 0 0 g 0 0 0 0 0 0 0 21 20 17 59 45 2 77 87 1 44 0 0 0 t 0 0 0 0 0 0 0 28 28 42 21 15 9 13 5 8 26 0 0 0

AT3G11100_UN0353.2_JASPAR_shift11 (AT3G11100:UN0353.2:JASPAR) 0.819 0.521 4.466 0.882 0.903 403 635 453 868 609 593.600
; assembly_13 versus AT3G11100_UN0353.2_JASPAR (AT3G11100:UN0353.2:JASPAR); m=119/229; ncol2=7; w=0; offset=2; strand=D; shift=11; score= 593.6; -----------mCGGCGA-- ; cor=0.819; Ncor=0.521; logoDP=4.466; NsEucl=0.882; NSW=0.903; rcor=403; rNcor=635; rlogoDP=453; rNsEucl=868; rNSW=609; rank_mean=593.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 1432 16 24 57 102 73 2127 0 0 c 0 0 0 0 0 0 0 0 0 0 0 652 2413 13 26 2298 55 58 0 0 g 0 0 0 0 0 0 0 0 0 0 0 254 6 2445 2394 12 2311 198 0 0 t 0 0 0 0 0 0 0 0 0 0 0 158 61 14 19 84 57 113 0 0

ERF057_MA1753.1_JASPAR_rc_shift9 (ERF057:MA1753.1:JASPAR_rc) 0.767 0.563 1.164 0.908 0.908 682 492 826 418 554 594.400
; assembly_13 versus ERF057_MA1753.1_JASPAR_rc (ERF057:MA1753.1:JASPAR_rc); m=120/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 594.4; ---------tGGCGGyGGhG ; cor=0.767; Ncor=0.563; logoDP=1.164; NsEucl=0.908; NSW=0.908; rcor=682; rNcor=492; rlogoDP=826; rNsEucl=418; rNSW=554; rank_mean=594.400; match_rank= a 0 0 0 0 0 0 0 0 0 199 91.696 171.28 32.872 0 0 10.381 3.46 58.824 337.37 93.426 c 0 0 0 0 0 0 0 0 0 189 0 12.111 874 0 0 578 12.111 44.983 389 31.142 g 0 0 0 0 0 0 0 0 0 130 856 694 3.46 1000 994.81 1.73 983 862 3.46 803 t 0 0 0 0 0 0 0 0 0 483 51.903 123 89.965 0 5.19 410 1.73 34.602 270 72.664

At5g65130.DAP_M0090_AthalianaCistrome_rc_shift9 (At5g65130.DAP:M0090:AthalianaCistrome_rc) 0.767 0.563 1.164 0.908 0.908 683 493 827 419 555 595.400
; assembly_13 versus At5g65130.DAP_M0090_AthalianaCistrome_rc (At5g65130.DAP:M0090:AthalianaCistrome_rc); m=121/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 595.4; ---------tGGCGGyGGhG ; cor=0.767; Ncor=0.563; logoDP=1.164; NsEucl=0.908; NSW=0.908; rcor=683; rNcor=493; rlogoDP=827; rNsEucl=419; rNSW=555; rank_mean=595.400; match_rank= a 0 0 0 0 0 0 0 0 0 115 53 99 19 0 0 6 2 34 195 54 c 0 0 0 0 0 0 0 0 0 109 0 7 505 0 0 334 7 26 225 18 g 0 0 0 0 0 0 0 0 0 75 495 401 2 578 575 1 568 498 2 464 t 0 0 0 0 0 0 0 0 0 279 30 71 52 0 3 237 1 20 156 42

ERF095_MA1264.2_JASPAR_shift8 (ERF095:MA1264.2:JASPAR) 0.732 0.620 4.703 0.898 0.886 871 276 426 632 790 599.000
; assembly_13 versus ERF095_MA1264.2_JASPAR (ERF095:MA1264.2:JASPAR); m=122/229; ncol2=13; w=-1; offset=-1; strand=D; shift=8; score= 599; --------ryGGCGGCGGmG ; cor=0.732; Ncor=0.620; logoDP=4.703; NsEucl=0.898; NSW=0.886; rcor=871; rNcor=276; rlogoDP=426; rNsEucl=632; rNSW=790; rank_mean=599.000; match_rank= a 0 0 0 0 0 0 0 0 189 78 4 55 3 0 0 13 5 76 191 90 c 0 0 0 0 0 0 0 0 45 335 0 2 570 0 4 525 6 85 231 25 g 0 0 0 0 0 0 0 0 327 2 587 534 0 591 587 0 503 423 43 402 t 0 0 0 0 0 0 0 0 30 176 0 0 18 0 0 53 77 7 126 74

ERF091_MA1228.2_JASPAR_shift8 (ERF091:MA1228.2:JASPAR) 0.733 0.620 4.956 0.897 0.884 867 275 397 650 813 600.400
; assembly_13 versus ERF091_MA1228.2_JASPAR (ERF091:MA1228.2:JASPAR); m=123/229; ncol2=13; w=-1; offset=-1; strand=D; shift=8; score= 600.4; --------ryGGCGGCGGmg ; cor=0.733; Ncor=0.620; logoDP=4.956; NsEucl=0.897; NSW=0.884; rcor=867; rNcor=275; rlogoDP=397; rNsEucl=650; rNSW=813; rank_mean=600.400; match_rank= a 0 0 0 0 0 0 0 0 187 78 0 34 0 0 0 13 6 85 179 91 c 0 0 0 0 0 0 0 0 52 289 0 0 526 0 0 505 7 69 205 25 g 0 0 0 0 0 0 0 0 263 0 534 503 0 537 537 0 472 378 32 337 t 0 0 0 0 0 0 0 0 35 170 3 0 11 0 0 19 52 5 121 84

ERF7_MA0993.1_JASPAR_rc_shift7 (ERF7:MA0993.1:JASPAR_rc) 0.805 0.495 0.219 0.907 0.930 477 728 1052 459 295 602.200
; assembly_13 versus ERF7_MA0993.1_JASPAR_rc (ERF7:MA0993.1:JASPAR_rc); m=124/229; ncol2=10; w=-2; offset=-2; strand=R; shift=7; score= 602.2; -------wwtgrCGGCk--- ; cor=0.805; Ncor=0.495; logoDP=0.219; NsEucl=0.907; NSW=0.930; rcor=477; rNcor=728; rlogoDP=1052; rNsEucl=459; rNSW=295; rank_mean=602.200; match_rank= a 0 0 0 0 0 0 0 312 317 198 128 266 10 65 0 35 156 0 0 0 c 0 0 0 0 0 0 0 201 198 210 66 132 875 36 84 874 140 0 0 0 g 0 0 0 0 0 0 0 209 208 174 593 456 25 770 868 14 442 0 0 0 t 0 0 0 0 0 0 0 279 276 419 212 146 90 129 48 77 263 0 0 0

WIN1_M0006_1.02_CISBP_rc_shift11 (WIN1:M0006_1.02:CISBP_rc) 0.753 0.565 2.059 0.902 0.914 757 481 740 557 490 605.000
; assembly_13 versus WIN1_M0006_1.02_CISBP_rc (WIN1:M0006_1.02:CISBP_rc); m=125/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 605; -----------aykGCGGyG ; cor=0.753; Ncor=0.565; logoDP=2.059; NsEucl=0.902; NSW=0.914; rcor=757; rNcor=481; rlogoDP=740; rNsEucl=557; rNSW=490; rank_mean=605.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 41 16 14 8 8 4 1 1 1 c 0 0 0 0 0 0 0 0 0 0 0 17 43 16 8 71 0 19 61 13 g 0 0 0 0 0 0 0 0 0 0 0 24 16 35 68 1 96 80 0 72 t 0 0 0 0 0 0 0 0 0 0 0 18 25 35 16 20 0 0 38 14

RAP2.6_RAP2.6_ArabidopsisPBM_rc_shift12 (RAP2.6:RAP2.6:ArabidopsisPBM_rc) 0.843 0.519 0.621 0.894 0.911 288 646 915 707 514 614.000
; assembly_13 versus RAP2.6_RAP2.6_ArabidopsisPBM_rc (RAP2.6:RAP2.6:ArabidopsisPBM_rc); m=126/229; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 614; ------------yGGCGGCG ; cor=0.843; Ncor=0.519; logoDP=0.621; NsEucl=0.894; NSW=0.911; rcor=288; rNcor=646; rlogoDP=915; rNsEucl=707; rNSW=514; rank_mean=614.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 6 1 2 0 0 0 0 1 c 0 0 0 0 0 0 0 0 0 0 0 0 61 0 1 100 0 10 99 1 g 0 0 0 0 0 0 0 0 0 0 0 0 3 92 95 0 98 90 0 95 t 0 0 0 0 0 0 0 0 0 0 0 0 30 7 2 0 2 0 1 3

WIN1_MA1804.1_JASPAR_rc_shift11 (WIN1:MA1804.1:JASPAR_rc) 0.750 0.563 2.064 0.901 0.913 772 497 739 566 497 614.200
; assembly_13 versus WIN1_MA1804.1_JASPAR_rc (WIN1:MA1804.1:JASPAR_rc); m=127/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 614.2; -----------aykgCGGyG ; cor=0.750; Ncor=0.563; logoDP=2.064; NsEucl=0.901; NSW=0.913; rcor=772; rNcor=497; rlogoDP=739; rNsEucl=566; rNSW=497; rank_mean=614.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 406 158 145 78 77 43 17 0.58 9.58 c 0 0 0 0 0 0 0 0 0 0 0 172 426 155 79 712 0.69 187 615 133 g 0 0 0 0 0 0 0 0 0 0 0 239 163 352 679 9.19 956 795 0.68 720 t 0 0 0 0 0 0 0 0 0 0 0 184.07 253 348.47 164 202 1.12 1.03 384 137

DEAR3_DEAR3_ArabidopsisPBM_rc_shift11 (DEAR3:DEAR3:ArabidopsisPBM_rc) 0.755 0.566 2.205 0.900 0.910 743 476 735 600 526 616.000
; assembly_13 versus DEAR3_DEAR3_ArabidopsisPBM_rc (DEAR3:DEAR3:ArabidopsisPBM_rc); m=128/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 616; -----------wsGkCGGyG ; cor=0.755; Ncor=0.566; logoDP=2.205; NsEucl=0.900; NSW=0.910; rcor=743; rNcor=476; rlogoDP=735; rNsEucl=600; rNSW=526; rank_mean=616.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 30 15 3 10 3 1 2 2 4 c 0 0 0 0 0 0 0 0 0 0 0 15 33 7 6 86 2 6 64 2 g 0 0 0 0 0 0 0 0 0 0 0 23 42 83 52 4 93 89 1 79 t 0 0 0 0 0 0 0 0 0 0 0 32 10 7 32 7 4 3 33 15

Os05g0497200_MA1034.1_JASPAR_rc_shift12 (Os05g0497200:MA1034.1:JASPAR_rc) 0.795 0.578 4.435 0.881 0.887 527 431 458 886 788 618.000
; assembly_13 versus Os05g0497200_MA1034.1_JASPAR_rc (Os05g0497200:MA1034.1:JASPAR_rc); m=129/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 618; ------------yGGCGsCG ; cor=0.795; Ncor=0.578; logoDP=4.435; NsEucl=0.881; NSW=0.887; rcor=527; rNcor=431; rlogoDP=458; rNsEucl=886; rNSW=788; rank_mean=618.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 5 3 3 3 3 3 3 3 c 0 0 0 0 0 0 0 0 0 0 0 0 495 3 3 990 3 332 990 3 g 0 0 0 0 0 0 0 0 0 0 0 0 5 990 990 3 990 661 3 990 t 0 0 0 0 0 0 0 0 0 0 0 0 495 3 3 3 3 3 3 3

LOC_Os05g41760_M0043_1.02_CISBP_rc_shift12 (LOC_Os05g41760:M0043_1.02:CISBP_rc) 0.795 0.578 4.553 0.880 0.885 528 432 447 893 802 620.400
; assembly_13 versus LOC_Os05g41760_M0043_1.02_CISBP_rc (LOC_Os05g41760:M0043_1.02:CISBP_rc); m=130/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 620.4; ------------yGGCGsCG ; cor=0.795; Ncor=0.578; logoDP=4.553; NsEucl=0.880; NSW=0.885; rcor=528; rNcor=432; rlogoDP=447; rNsEucl=893; rNSW=802; rank_mean=620.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 50 0 0 99 0 34 99 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 100 99 0 100 66 0 100 t 0 0 0 0 0 0 0 0 0 0 0 0 50 0 0 1 0 0 1 0

AT1G75490_MA1250.1_JASPAR_rc_shift9 (AT1G75490:MA1250.1:JASPAR_rc) 0.756 0.554 1.023 0.908 0.906 738 523 846 433 572 622.400
; assembly_13 versus AT1G75490_MA1250.1_JASPAR_rc (AT1G75490:MA1250.1:JASPAR_rc); m=131/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 622.4; ---------wGgCGGYGGmg ; cor=0.756; Ncor=0.554; logoDP=1.023; NsEucl=0.908; NSW=0.906; rcor=738; rNcor=523; rlogoDP=846; rNsEucl=433; rNSW=572; rank_mean=622.400; match_rank= a 0 0 0 0 0 0 0 0 0 172 133 107 6 0 2 1 0 31 221 93 c 0 0 0 0 0 0 0 0 0 127 8 10 519 0 1 160 0 18 205 30 g 0 0 0 0 0 0 0 0 0 21 395 366 0 556 554 0 551 489 13 360 t 0 0 0 0 0 0 0 0 0 237 21 74 32 1 0 396 6 19 118 74

AT1G19210_MA1234.1_JASPAR_shift7 (AT1G19210:MA1234.1:JASPAR) 0.716 0.563 4.165 0.903 0.896 968 496 492 538 685 635.800
; assembly_13 versus AT1G19210_MA1234.1_JASPAR (AT1G19210:MA1234.1:JASPAR); m=132/229; ncol2=14; w=-2; offset=-2; strand=D; shift=7; score= 635.8; -------dtgGwCGGyGrhg ; cor=0.716; Ncor=0.563; logoDP=4.165; NsEucl=0.903; NSW=0.896; rcor=968; rNcor=496; rlogoDP=492; rNsEucl=538; rNSW=685; rank_mean=635.800; match_rank= a 0 0 0 0 0 0 0 217 127 47 0 291 0 0 0 43 27 160 195 136 c 0 0 0 0 0 0 0 45 34 19 0 79 599 0 0 185 9 72 157 46 g 0 0 0 0 0 0 0 183 53 403 599 42 0 599 599 0 524 306 84 292 t 0 0 0 0 0 0 0 154 385 130 0 187 0 0 0 371 39 61 163 125

ERF115_MA2013.2_JASPAR_rc_shift10 (ERF115:MA2013.2:JASPAR_rc) 0.780 0.650 0.283 0.897 0.894 619 191 1015 654 711 638.000
; assembly_13 versus ERF115_MA2013.2_JASPAR_rc (ERF115:MA2013.2:JASPAR_rc); m=133/229; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 638; ----------kGCGGCGGCG ; cor=0.780; Ncor=0.650; logoDP=0.283; NsEucl=0.897; NSW=0.894; rcor=619; rNcor=191; rlogoDP=1015; rNsEucl=654; rNSW=711; rank_mean=638.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 97 121 18 12 24 10 10 18 126 32 c 0 0 0 0 0 0 0 0 0 0 42 55 840 0 12 880 6 35 715 15 g 0 0 0 0 0 0 0 0 0 0 286 698 3 880 865 1 866 839 8 815 t 0 0 0 0 0 0 0 0 0 0 480 31 44 13 4 14 23 13 56 43

ERF3_MA1005.1_JASPAR_rc_shift12 (ERF3:MA1005.1:JASPAR_rc) 0.774 0.563 3.760 0.886 0.896 650 495 552 821 683 640.200
; assembly_13 versus ERF3_MA1005.1_JASPAR_rc (ERF3:MA1005.1:JASPAR_rc); m=134/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 640.2; ------------yGgCGGCG ; cor=0.774; Ncor=0.563; logoDP=3.760; NsEucl=0.886; NSW=0.896; rcor=650; rNcor=495; rlogoDP=552; rNsEucl=821; rNSW=683; rank_mean=640.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 116 16 114 0 0 0 0 80 c 0 0 0 0 0 0 0 0 0 0 0 0 279 0 186 985 14 114 985 80 g 0 0 0 0 0 0 0 0 0 0 0 0 23 904 643 0 985 885 0 760 t 0 0 0 0 0 0 0 0 0 0 0 0 581 79 57 14 0 0 14 80

AT5G07580_M0035_1.02_CISBP_shift12 (AT5G07580:M0035_1.02:CISBP) 0.778 0.519 0.998 0.898 0.917 626 647 855 630 448 641.200
; assembly_13 versus AT5G07580_M0035_1.02_CISBP (AT5G07580:M0035_1.02:CISBP); m=135/229; ncol2=9; w=0; offset=3; strand=D; shift=12; score= 641.2; ------------ygsYGgcy ; cor=0.778; Ncor=0.519; logoDP=0.998; NsEucl=0.898; NSW=0.917; rcor=626; rNcor=647; rlogoDP=855; rNsEucl=630; rNSW=448; rank_mean=641.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 13 9 11 1 13 12 16 17 c 0 0 0 0 0 0 0 0 0 0 0 0 27 10 35 68 6 19 48 32 g 0 0 0 0 0 0 0 0 0 0 0 0 20 67 36 0 70 48 13 21 t 0 0 0 0 0 0 0 0 0 0 0 0 40 14 18 31 11 21 23 30

ERF7.ampDAP_M0063_AthalianaCistrome_shift8 (ERF7.ampDAP:M0063:AthalianaCistrome) 0.767 0.402 5.078 0.906 0.904 688 1079 372 461 607 641.400
; assembly_13 versus ERF7.ampDAP_M0063_AthalianaCistrome (ERF7.ampDAP:M0063:AthalianaCistrome); m=136/229; ncol2=21; w=-1; offset=-1; strand=D; shift=8; score= 641.4; --------ayGGCGGCGgmr ; cor=0.767; Ncor=0.402; logoDP=5.078; NsEucl=0.906; NSW=0.904; rcor=688; rNcor=1079; rlogoDP=372; rNsEucl=461; rNSW=607; rank_mean=641.400; match_rank= a 0 0 0 0 0 0 0 0 315 59 2 103 0 0 0 1 0 65 219 151 c 0 0 0 0 0 0 0 0 23 164 0 1 579 0 2 577 7 119 172 33 g 0 0 0 0 0 0 0 0 120 7 537 469 0 579 576 0 481 365 69 301 t 0 0 0 0 0 0 0 0 121 349 40 6 0 0 1 1 91 30 119 94

ERF3_M0011_1.02_CISBP_rc_shift12 (ERF3:M0011_1.02:CISBP_rc) 0.773 0.562 3.816 0.886 0.896 653 500 542 825 689 641.800
; assembly_13 versus ERF3_M0011_1.02_CISBP_rc (ERF3:M0011_1.02:CISBP_rc); m=137/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 641.8; ------------yGgCGGCG ; cor=0.773; Ncor=0.562; logoDP=3.816; NsEucl=0.886; NSW=0.896; rcor=653; rNcor=500; rlogoDP=542; rNsEucl=825; rNSW=689; rank_mean=641.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 12 2 11 0 0 0 0 8 c 0 0 0 0 0 0 0 0 0 0 0 0 28 0 19 99 1 11 99 8 g 0 0 0 0 0 0 0 0 0 0 0 0 2 90 64 0 99 89 0 76 t 0 0 0 0 0 0 0 0 0 0 0 0 58 8 6 1 0 0 1 8

EREB138_MA2415.1_JASPAR_rc_shift11 (EREB138:MA2415.1:JASPAR_rc) 0.782 0.587 2.695 0.890 0.892 600 404 695 771 740 642.000
; assembly_13 versus EREB138_MA2415.1_JASPAR_rc (EREB138:MA2415.1:JASPAR_rc); m=138/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 642; -----------ATGGCGGCk ; cor=0.782; Ncor=0.587; logoDP=2.695; NsEucl=0.890; NSW=0.892; rcor=600; rNcor=404; rlogoDP=695; rNsEucl=771; rNSW=740; rank_mean=642.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5360 83 55 96 123 102 76 101 353 c 0 0 0 0 0 0 0 0 0 0 0 357 588 99 128 5888 242 134 5958 539 g 0 0 0 0 0 0 0 0 0 0 0 446 154 6124 6075 156 5826 6069 183 2127 t 0 0 0 0 0 0 0 0 0 0 0 193 5531 78 57 189 186 77 114 3337

ERF096_MA0998.1_JASPAR_rc_shift11 (ERF096:MA0998.1:JASPAR_rc) 0.746 0.560 2.512 0.897 0.905 791 504 716 649 590 650.000
; assembly_13 versus ERF096_MA0998.1_JASPAR_rc (ERF096:MA0998.1:JASPAR_rc); m=139/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 650; -----------rtGgCGGCk ; cor=0.746; Ncor=0.560; logoDP=2.512; NsEucl=0.897; NSW=0.905; rcor=791; rNcor=504; rlogoDP=716; rNsEucl=649; rNSW=590; rank_mean=650.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 290 200 38 149 19 32 27 13 76 c 0 0 0 0 0 0 0 0 0 0 0 223 240 24 131 928 21 36 939 167 g 0 0 0 0 0 0 0 0 0 0 0 254 176 903 591 10 850 905 13 468 t 0 0 0 0 0 0 0 0 0 0 0 233 384 35 129 43 97 32 34 289

ERF115_MA2013.1_JASPAR_rc_shift8 (ERF115:MA2013.1:JASPAR_rc) 0.776 0.569 0.283 0.905 0.901 637 467 1014 494 641 650.600
; assembly_13 versus ERF115_MA2013.1_JASPAR_rc (ERF115:MA2013.1:JASPAR_rc); m=140/229; ncol2=15; w=-1; offset=-1; strand=R; shift=8; score= 650.6; --------gykGCGGCGGCG ; cor=0.776; Ncor=0.569; logoDP=0.283; NsEucl=0.905; NSW=0.901; rcor=637; rNcor=467; rlogoDP=1014; rNsEucl=494; rNSW=641; rank_mean=650.600; match_rank= a 0 0 0 0 0 0 0 0 221 166 97 121 18 12 24 10 10 18 126 32 c 0 0 0 0 0 0 0 0 92 375 42 55 840 0 12 880 6 35 715 15 g 0 0 0 0 0 0 0 0 418 71 286 698 3 880 865 1 866 839 8 815 t 0 0 0 0 0 0 0 0 174 293 480 31 44 13 4 14 23 13 56 43

AT5G43410_M0037_1.02_CISBP_rc_shift11 (AT5G43410:M0037_1.02:CISBP_rc) 0.744 0.558 2.569 0.897 0.904 797 510 709 660 603 655.800
; assembly_13 versus AT5G43410_M0037_1.02_CISBP_rc (AT5G43410:M0037_1.02:CISBP_rc); m=141/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 655.8; -----------rtGgCGGCk ; cor=0.744; Ncor=0.558; logoDP=2.569; NsEucl=0.897; NSW=0.904; rcor=797; rNcor=510; rlogoDP=709; rNsEucl=660; rNSW=603; rank_mean=655.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 29 20 4 15 2 3 2 1 8 c 0 0 0 0 0 0 0 0 0 0 0 23 24 2 13 93 2 4 95 16 g 0 0 0 0 0 0 0 0 0 0 0 25 18 90 59 1 85 91 1 47 t 0 0 0 0 0 0 0 0 0 0 0 23 38 4 13 4 10 3 3 29

ERF5.ampDAP_M0101_AthalianaCistrome_rc_shift3 (ERF5.ampDAP:M0101:AthalianaCistrome_rc) 0.788 0.413 1.109 0.911 0.912 564 1028 835 369 500 659.200
; assembly_13 versus ERF5.ampDAP_M0101_AthalianaCistrome_rc (ERF5.ampDAP:M0101:AthalianaCistrome_rc); m=142/229; ncol2=21; w=-6; offset=-6; strand=R; shift=3; score= 659.2; ---cggyggykryGGCGGCG ; cor=0.788; Ncor=0.413; logoDP=1.109; NsEucl=0.911; NSW=0.912; rcor=564; rNcor=1028; rlogoDP=835; rNsEucl=369; rNSW=500; rank_mean=659.200; match_rank= a 0 0 0 97 113 125 126 132 113 121 140 169 41 1 53 2 0 0 4 2 c 0 0 0 250 72 100 234 40 72 208 56 38 292 0 4 555 0 9 557 11 g 0 0 0 108 277 255 60 271 277 44 226 302 1 566 508 0 567 557 0 451 t 0 0 0 112 105 87 147 124 105 194 145 58 233 0 2 10 0 1 6 103

ERF73.ampDAP_M0138_AthalianaCistrome_shift8 (ERF73.ampDAP:M0138:AthalianaCistrome) 0.766 0.401 5.521 0.902 0.894 691 1081 291 565 710 667.600
; assembly_13 versus ERF73.ampDAP_M0138_AthalianaCistrome (ERF73.ampDAP:M0138:AthalianaCistrome); m=143/229; ncol2=21; w=-1; offset=-1; strand=D; shift=8; score= 667.6; --------ryGGCGGCGGmG ; cor=0.766; Ncor=0.401; logoDP=5.521; NsEucl=0.902; NSW=0.894; rcor=691; rNcor=1081; rlogoDP=291; rNsEucl=565; rNSW=710; rank_mean=667.600; match_rank= a 0 0 0 0 0 0 0 0 73 14 7 14 2 1 0 0 0 9 63 22 c 0 0 0 0 0 0 0 0 6 62 2 1 174 0 0 175 2 21 66 4 g 0 0 0 0 0 0 0 0 73 9 147 161 0 175 175 0 168 143 4 129 t 0 0 0 0 0 0 0 0 24 91 20 0 0 0 1 1 6 3 43 21

Solyc04g078640.3.1_AP2EREBP_1_AT1G46768_EEAD0649_EEADannot_shift13 (Solyc04g078640.3.1_AP2EREBP_1_AT1G46768:EEAD0649:EEADannot) 0.791 0.462 3.788 0.884 0.906 542 848 549 841 573 670.600
; assembly_13 versus Solyc04g078640.3.1_AP2EREBP_1_AT1G46768_EEAD0649_EEADannot (Solyc04g078640.3.1_AP2EREBP_1_AT1G46768:EEAD0649:EEADannot); m=144/229; ncol2=8; w=0; offset=4; strand=D; shift=13; score= 670.6; -------------GtCGGTG ; cor=0.791; Ncor=0.462; logoDP=3.788; NsEucl=0.884; NSW=0.906; rcor=542; rNcor=848; rlogoDP=549; rNsEucl=841; rNSW=573; rank_mean=670.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 2 23 0 0 0 5 7 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 93 0 0 18 6 g 0 0 0 0 0 0 0 0 0 0 0 0 0 91 18 0 100 100 0 70 t 0 0 0 0 0 0 0 0 0 0 0 0 0 7 51 7 0 0 77 17

ERF2_M0038_1.02_CISBP_rc_shift12 (ERF2:M0038_1.02:CISBP_rc) 0.782 0.481 0.141 0.903 0.924 604 775 1078 542 359 671.600
; assembly_13 versus ERF2_M0038_1.02_CISBP_rc (ERF2:M0038_1.02:CISBP_rc); m=145/229; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 671.6; ------------tGgCGGCk ; cor=0.782; Ncor=0.481; logoDP=0.141; NsEucl=0.903; NSW=0.924; rcor=604; rNcor=775; rlogoDP=1078; rNsEucl=542; rNSW=359; rank_mean=671.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 22 11 21 4 9 7 6 15 c 0 0 0 0 0 0 0 0 0 0 0 0 22 9 15 78 4 14 72 24 g 0 0 0 0 0 0 0 0 0 0 0 0 22 68 46 2 70 69 8 32 t 0 0 0 0 0 0 0 0 0 0 0 0 34 12 18 16 17 10 14 29

RAP2-6_MA1052.1_JASPAR_rc_shift13 (RAP2-6:MA1052.1:JASPAR_rc) 0.850 0.496 0.589 0.883 0.905 258 726 927 852 597 672.000
; assembly_13 versus RAP2-6_MA1052.1_JASPAR_rc (RAP2-6:MA1052.1:JASPAR_rc); m=146/229; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 672; -------------GGCGGCG ; cor=0.850; Ncor=0.496; logoDP=0.589; NsEucl=0.883; NSW=0.905; rcor=258; rNcor=726; rlogoDP=927; rNsEucl=852; rNSW=597; rank_mean=672.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 10 20 3 1 1 2 8 c 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 990 2 104 989 7 g 0 0 0 0 0 0 0 0 0 0 0 0 0 921 947 3 985 894 2 958 t 0 0 0 0 0 0 0 0 0 0 0 0 0 66 20 4 12 2 7 27

EREB87_Mo17_1_EEAD0358_EEADannot_rc_shift9 (EREB87_Mo17_1:EEAD0358:EEADannot_rc) 0.718 0.718 3.667 0.889 0.864 955 71 560 795 983 672.800
; assembly_13 versus EREB87_Mo17_1_EEAD0358_EEADannot_rc (EREB87_Mo17_1:EEAD0358:EEADannot_rc); m=147/229; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 672.8; ---------cGGCGGCGGCG ; cor=0.718; Ncor=0.718; logoDP=3.667; NsEucl=0.889; NSW=0.864; rcor=955; rNcor=71; rlogoDP=560; rNsEucl=795; rNSW=983; rank_mean=672.800; match_rank= a 0 0 0 0 0 0 0 0 0 9 2 13 3 1 5 1 0 1 4 4 c 0 0 0 0 0 0 0 0 0 65 4 4 82 0 2 97 0 6 91 2 g 0 0 0 0 0 0 0 0 0 12 90 78 2 99 92 0 99 93 0 93 t 0 0 0 0 0 0 0 0 0 14 4 5 13 0 1 2 1 0 5 1

ATERF-4_M0022_1.02_CISBP_rc_shift10 (ATERF-4:M0022_1.02:CISBP_rc) 0.788 0.573 0.327 0.890 0.903 565 451 990 772 608 677.200
; assembly_13 versus ATERF-4_M0022_1.02_CISBP_rc (ATERF-4:M0022_1.02:CISBP_rc); m=148/229; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 677.2; ----------GgCGGCGg-- ; cor=0.788; Ncor=0.573; logoDP=0.327; NsEucl=0.890; NSW=0.903; rcor=565; rNcor=451; rlogoDP=990; rNsEucl=772; rNSW=608; rank_mean=677.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 4 15 0 0 1 1 9 9 0 0 c 0 0 0 0 0 0 0 0 0 0 4 13 99 1 8 95 12 22 0 0 g 0 0 0 0 0 0 0 0 0 0 80 66 0 98 90 2 73 52 0 0 t 0 0 0 0 0 0 0 0 0 0 12 6 1 1 1 2 6 17 0 0

ERF73.DAP_M0117_AthalianaCistrome_rc_shift6 (ERF73.DAP:M0117:AthalianaCistrome_rc) 0.772 0.404 2.919 0.908 0.906 658 1065 655 435 576 677.800
; assembly_13 versus ERF73.DAP_M0117_AthalianaCistrome_rc (ERF73.DAP:M0117:AthalianaCistrome_rc); m=149/229; ncol2=21; w=-3; offset=-3; strand=R; shift=6; score= 677.8; ------ygrhdryGGCGGCG ; cor=0.772; Ncor=0.404; logoDP=2.919; NsEucl=0.908; NSW=0.906; rcor=658; rNcor=1065; rlogoDP=655; rNsEucl=435; rNSW=576; rank_mean=677.800; match_rank= a 0 0 0 0 0 0 134 131 181 213 208 232 64 31 29 7 0 4 0 0 c 0 0 0 0 0 0 182 65 61 149 35 47 214 8 0 549 0 0 545 0 g 0 0 0 0 0 0 100 231 236 43 165 216 0 471 534 0 563 559 0 549 t 0 0 0 0 0 0 147 136 85 158 155 68 285 53 0 7 0 0 18 14

ERF10.ampDAP_M0091_AthalianaCistrome_shift0 (ERF10.ampDAP:M0091:AthalianaCistrome) 0.753 0.414 5.534 0.901 0.892 762 1022 288 579 739 678.000
; assembly_13 versus ERF10.ampDAP_M0091_AthalianaCistrome (ERF10.ampDAP:M0091:AthalianaCistrome); m=150/229; ncol2=20; w=-9; offset=-9; strand=D; shift=0; score= 678; cgrhrrwwrtGGCGGCGghk ; cor=0.753; Ncor=0.414; logoDP=5.534; NsEucl=0.901; NSW=0.892; rcor=762; rNcor=1022; rlogoDP=288; rNsEucl=579; rNSW=739; rank_mean=678.000; match_rank= a 135 126 149 148 153 194 212 247 254 58 2 42 0 0 0 1 1 39 219 141 c 181 107 93 174 73 80 105 31 37 132 0 0 565 0 0 564 0 138 162 26 g 123 203 214 96 224 202 58 123 183 4 507 513 0 565 565 0 549 362 35 247 t 126 129 109 147 115 89 190 164 91 371 56 10 0 0 0 0 15 26 149 151

ERF4_MA0992.1_JASPAR_rc_shift10 (ERF4:MA0992.1:JASPAR_rc) 0.786 0.572 0.336 0.890 0.903 571 455 981 776 610 678.600
; assembly_13 versus ERF4_MA0992.1_JASPAR_rc (ERF4:MA0992.1:JASPAR_rc); m=151/229; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 678.6; ----------GgCGGCGg-- ; cor=0.786; Ncor=0.572; logoDP=0.336; NsEucl=0.890; NSW=0.903; rcor=571; rNcor=455; rlogoDP=981; rNsEucl=776; rNSW=610; rank_mean=678.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 39 150 0 0 6 6 94 90 0 0 c 0 0 0 0 0 0 0 0 0 0 39 131 988 12 83 952 115 225 0 0 g 0 0 0 0 0 0 0 0 0 0 800 662 6 976 899 18 726 517 0 0 t 0 0 0 0 0 0 0 0 0 0 123 56 6 12 12 24 65 169 0 0

ERF073_MA1754.1_JASPAR_rc_shift6 (ERF073:MA1754.1:JASPAR_rc) 0.772 0.404 2.919 0.908 0.906 659 1067 656 436 578 679.200
; assembly_13 versus ERF073_MA1754.1_JASPAR_rc (ERF073:MA1754.1:JASPAR_rc); m=152/229; ncol2=21; w=-3; offset=-3; strand=R; shift=6; score= 679.2; ------ygrhdryGGCGGCG ; cor=0.772; Ncor=0.404; logoDP=2.919; NsEucl=0.908; NSW=0.906; rcor=659; rNcor=1067; rlogoDP=656; rNsEucl=436; rNSW=578; rank_mean=679.200; match_rank= a 0 0 0 0 0 0 238 233 321 378.33 369 412 114 55.062 51.51 12.433 0 7.105 0 0 c 0 0 0 0 0 0 323 115 108 265 62.167 83.481 380 14.21 0 975 0 0 968 0 g 0 0 0 0 0 0 177.62 410 419 76.377 293 384 0 836.59 948.49 0 1000 993 0 975 t 0 0 0 0 0 0 261 242 151 281 275 121 506 94.139 0 12.433 0 0 31.972 24.867

RAP2-3_MA1051.1_JASPAR_rc_shift13 (RAP2-3:MA1051.1:JASPAR_rc) 0.814 0.475 0.387 0.890 0.915 426 803 963 773 473 687.600
; assembly_13 versus RAP2-3_MA1051.1_JASPAR_rc (RAP2-3:MA1051.1:JASPAR_rc); m=153/229; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 687.6; -------------kGCGGCG ; cor=0.814; Ncor=0.475; logoDP=0.387; NsEucl=0.890; NSW=0.915; rcor=426; rNcor=803; rlogoDP=963; rNsEucl=773; rNSW=473; rank_mean=687.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 73 85 15 3 4 5 58 c 0 0 0 0 0 0 0 0 0 0 0 0 0 6 26 976 4 244 982 33 g 0 0 0 0 0 0 0 0 0 0 0 0 0 664 780 3 977 746 6 761 t 0 0 0 0 0 0 0 0 0 0 0 0 0 257 109 6 16 6 7 147

ERF104_MA1239.2_JASPAR_rc_shift8 (ERF104:MA1239.2:JASPAR_rc) 0.747 0.513 1.645 0.903 0.896 787 670 774 536 681 689.600
; assembly_13 versus ERF104_MA1239.2_JASPAR_rc (ERF104:MA1239.2:JASPAR_rc); m=154/229; ncol2=16; w=-1; offset=-1; strand=R; shift=8; score= 689.6; --------ryGGCGGCGgmg ; cor=0.747; Ncor=0.513; logoDP=1.645; NsEucl=0.903; NSW=0.896; rcor=787; rNcor=670; rlogoDP=774; rNsEucl=536; rNSW=681; rank_mean=689.600; match_rank= a 0 0 0 0 0 0 0 0 192 62 0 89 3 0 0 25 5 90 169 75 c 0 0 0 0 0 0 0 0 51 281 0 0 527 0 2 496 6 76 213 33 g 0 0 0 0 0 0 0 0 274 0 553 466 0 557 555 0 464 369 50 363 t 0 0 0 0 0 0 0 0 40 214 4 2 27 0 0 36 82 22 125 86

EREB46_ZmSHINE_Mo17_1_EEAD0350_EEADannot_rc_shift9 (EREB46_ZmSHINE_Mo17_1:EEAD0350:EEADannot_rc) 0.711 0.711 3.292 0.890 0.867 1019 89 607 775 961 690.200
; assembly_13 versus EREB46_ZmSHINE_Mo17_1_EEAD0350_EEADannot_rc (EREB46_ZmSHINE_Mo17_1:EEAD0350:EEADannot_rc); m=155/229; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 690.2; ---------cGGCGGCGGCG ; cor=0.711; Ncor=0.711; logoDP=3.292; NsEucl=0.890; NSW=0.867; rcor=1019; rNcor=89; rlogoDP=607; rNsEucl=775; rNSW=961; rank_mean=690.200; match_rank= a 0 0 0 0 0 0 0 0 0 10 3 11 6 1 3 0 0 3 8 4 c 0 0 0 0 0 0 0 0 0 67 0 0 81 0 0 84 0 7 76 2 g 0 0 0 0 0 0 0 0 0 7 95 81 0 99 94 1 100 88 3 94 t 0 0 0 0 0 0 0 0 0 16 2 8 13 0 3 15 0 2 13 0

ABR1.ampDAP_M0034_AthalianaCistrome_rc_shift2 (ABR1.ampDAP:M0034:AthalianaCistrome_rc) 0.786 0.412 0.207 0.913 0.916 570 1032 1056 334 461 690.600
; assembly_13 versus ABR1.ampDAP_M0034_AthalianaCistrome_rc (ABR1.ampDAP:M0034:AthalianaCistrome_rc); m=156/229; ncol2=21; w=-7; offset=-7; strand=R; shift=2; score= 690.6; --rygrawaTkGCGGCGgmg ; cor=0.786; Ncor=0.412; logoDP=0.207; NsEucl=0.913; NSW=0.916; rcor=570; rNcor=1032; rlogoDP=1056; rNsEucl=334; rNSW=461; rank_mean=690.600; match_rank= a 0 0 154 129 133 200 262 284 378 70 27 103 0 0 0 0 0 57 198 116 c 0 0 98 185 99 85 115 30 3 78 0 5 582 0 0 583 5 126 205 47 g 0 0 207 123 224 224 82 120 82 0 319 449 0 583 583 0 468 374 69 302 t 0 0 124 146 127 74 124 149 120 435 237 26 1 0 0 0 110 26 111 118

ERF5_M0039_1.02_CISBP_rc_shift9 (ERF5:M0039_1.02:CISBP_rc) 0.704 0.640 0.204 0.903 0.905 1067 214 1057 545 589 694.400
; assembly_13 versus ERF5_M0039_1.02_CISBP_rc (ERF5:M0039_1.02:CISBP_rc); m=157/229; ncol2=10; w=0; offset=0; strand=R; shift=9; score= 694.4; ---------kggcggCksd- ; cor=0.704; Ncor=0.640; logoDP=0.204; NsEucl=0.903; NSW=0.905; rcor=1067; rNcor=214; rlogoDP=1057; rNsEucl=545; rNSW=589; rank_mean=694.400; match_rank= a 0 0 0 0 0 0 0 0 0 21 12 24 8 7 9 5 17 23 25 0 c 0 0 0 0 0 0 0 0 0 17 11 21 59 7 18 75 18 27 20 0 g 0 0 0 0 0 0 0 0 0 30 60 35 12 67 61 6 37 27 28 0 t 0 0 0 0 0 0 0 0 0 32 17 20 21 19 12 14 28 23 27 0

ERF15_MA1231.1_JASPAR_rc_shift11 (ERF15:MA1231.1:JASPAR_rc) 0.820 0.434 0.165 0.901 0.912 400 944 1071 573 503 698.200
; assembly_13 versus ERF15_MA1231.1_JASPAR_rc (ERF15:MA1231.1:JASPAR_rc); m=158/229; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 698.2; -----------ryGGCGGCK ; cor=0.820; Ncor=0.434; logoDP=0.165; NsEucl=0.901; NSW=0.912; rcor=400; rNcor=944; rlogoDP=1071; rNsEucl=573; rNSW=503; rank_mean=698.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 205 66 1 26 5 0 0 11 0 c 0 0 0 0 0 0 0 0 0 0 0 33 322 0 0 575 0 0 550 8 g 0 0 0 0 0 0 0 0 0 0 0 332 0 593 570 0 572 596 0 432 t 0 0 0 0 0 0 0 0 0 0 0 26 208 2 0 16 24 0 35 156

ERF6.DAP_M0122_AthalianaCistrome_rc_shift6 (ERF6.DAP:M0122:AthalianaCistrome_rc) 0.772 0.404 3.035 0.905 0.900 657 1064 636 497 644 699.600
; assembly_13 versus ERF6.DAP_M0122_AthalianaCistrome_rc (ERF6.DAP:M0122:AthalianaCistrome_rc); m=159/229; ncol2=21; w=-3; offset=-3; strand=R; shift=6; score= 699.6; ------ckgykryGGCGGCG ; cor=0.772; Ncor=0.404; logoDP=3.035; NsEucl=0.905; NSW=0.900; rcor=657; rNcor=1064; rlogoDP=636; rNsEucl=497; rNSW=644; rank_mean=699.600; match_rank= a 0 0 0 0 0 0 126 118 118 126 127 136 46 0 16 0 0 0 1 0 c 0 0 0 0 0 0 184 43 62 152 43 49 255 0 0 507 0 1 507 3 g 0 0 0 0 0 0 78 223 240 35 214 279 2 513 497 0 513 512 0 471 t 0 0 0 0 0 0 125 129 93 200 129 49 210 0 0 6 0 0 5 39

ERF054_MA1232.2_JASPAR_shift10 (ERF054:MA1232.2:JASPAR) 0.753 0.547 4.198 0.879 0.883 760 543 484 899 819 701.000
; assembly_13 versus ERF054_MA1232.2_JASPAR (ERF054:MA1232.2:JASPAR); m=160/229; ncol2=8; w=0; offset=1; strand=D; shift=10; score= 701; ----------GdCGGyGg-- ; cor=0.753; Ncor=0.547; logoDP=4.198; NsEucl=0.879; NSW=0.883; rcor=760; rNcor=543; rlogoDP=484; rNsEucl=899; rNSW=819; rank_mean=701.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 11 153 1 0 0 0 23 77 0 0 c 0 0 0 0 0 0 0 0 0 0 3 21 564 0 2 213 12 96 0 0 g 0 0 0 0 0 0 0 0 0 0 546 199 0 567 565 0 484 374 0 0 t 0 0 0 0 0 0 0 0 0 0 7 194 2 0 0 354 48 20 0 0

ERF11_MA1001.3_JASPAR_rc_shift9 (ERF11:MA1001.3:JASPAR_rc) 0.703 0.645 2.545 0.896 0.880 1073 209 714 679 840 703.000
; assembly_13 versus ERF11_MA1001.3_JASPAR_rc (ERF11:MA1001.3:JASPAR_rc); m=161/229; ncol2=12; w=0; offset=0; strand=R; shift=9; score= 703; ---------ygGyGGCGGCG ; cor=0.703; Ncor=0.645; logoDP=2.545; NsEucl=0.896; NSW=0.880; rcor=1073; rNcor=209; rlogoDP=714; rNsEucl=679; rNSW=840; rank_mean=703.000; match_rank= a 0 0 0 0 0 0 0 0 0 290 286 157 81 18 74 24 6 9 38 109 c 0 0 0 0 0 0 0 0 0 522 144 45 435 11 9 1271 5 13 1270 63 g 0 0 0 0 0 0 0 0 0 126 653 1086 5 1304 1281 2 1346 1347 6 1008 t 0 0 0 0 0 0 0 0 0 435 290 85 852 40 9 76 16 4 59 193

AT3G57600_MA1242.1_JASPAR_rc_shift13 (AT3G57600:MA1242.1:JASPAR_rc) 0.858 0.400 0.155 0.893 0.920 233 1086 1073 722 415 705.800
; assembly_13 versus AT3G57600_MA1242.1_JASPAR_rc (AT3G57600:MA1242.1:JASPAR_rc); m=162/229; ncol2=11; w=0; offset=4; strand=R; shift=13; score= 705.8; -------------GGCGGYG ; cor=0.858; Ncor=0.400; logoDP=0.155; NsEucl=0.893; NSW=0.920; rcor=233; rNcor=1086; rlogoDP=1073; rNsEucl=722; rNSW=415; rank_mean=705.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 110 19 0 3 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 453 0 0 131 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 346 438 0 475 478 0 477 t 0 0 0 0 0 0 0 0 0 0 0 0 0 20 21 25 0 0 347 1

AT4G18450_MA1228.1_JASPAR_shift8 (AT4G18450:MA1228.1:JASPAR) 0.733 0.474 4.956 0.897 0.884 867 808 397 650 813 707.000
; assembly_13 versus AT4G18450_MA1228.1_JASPAR (AT4G18450:MA1228.1:JASPAR); m=163/229; ncol2=17; w=-1; offset=-1; strand=D; shift=8; score= 707; --------ryGGCGGCGGmg ; cor=0.733; Ncor=0.474; logoDP=4.956; NsEucl=0.897; NSW=0.884; rcor=867; rNcor=808; rlogoDP=397; rNsEucl=650; rNSW=813; rank_mean=707.000; match_rank= a 0 0 0 0 0 0 0 0 187 78 0 34 0 0 0 13 6 85 179 91 c 0 0 0 0 0 0 0 0 52 289 0 0 526 0 0 505 7 69 205 25 g 0 0 0 0 0 0 0 0 263 0 534 503 0 537 537 0 472 378 32 337 t 0 0 0 0 0 0 0 0 35 170 3 0 11 0 0 19 52 5 121 84

ERF057_MA1753.2_JASPAR_rc_shift10 (ERF057:MA1753.2:JASPAR_rc) 0.773 0.515 0.255 0.901 0.902 652 659 1035 570 619 707.000
; assembly_13 versus ERF057_MA1753.2_JASPAR_rc (ERF057:MA1753.2:JASPAR_rc); m=164/229; ncol2=14; w=0; offset=1; strand=R; shift=10; score= 707; ----------GGCGGyGGhG ; cor=0.773; Ncor=0.515; logoDP=0.255; NsEucl=0.901; NSW=0.902; rcor=652; rNcor=659; rlogoDP=1035; rNsEucl=570; rNSW=619; rank_mean=707.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 92 171 33 0 0 10 3 59 337 93 c 0 0 0 0 0 0 0 0 0 0 0 12 874 0 0 578 12 45 389 31 g 0 0 0 0 0 0 0 0 0 0 856 694 3 1000 995 2 983 862 3 803 t 0 0 0 0 0 0 0 0 0 0 52 123 90 0 5 410 2 35 270 73

ERF109_MA1053.1_JASPAR_rc_shift13 (ERF109:MA1053.1:JASPAR_rc) 0.822 0.480 0.603 0.883 0.904 385 782 925 855 598 709.000
; assembly_13 versus ERF109_MA1053.1_JASPAR_rc (ERF109:MA1053.1:JASPAR_rc); m=165/229; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 709; -------------GGCGGCG ; cor=0.822; Ncor=0.480; logoDP=0.603; NsEucl=0.883; NSW=0.904; rcor=385; rNcor=782; rlogoDP=925; rNsEucl=855; rNSW=598; rank_mean=709.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 18 86 5 3 2 3 6 c 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 978 2 168 989 8 g 0 0 0 0 0 0 0 0 0 0 0 0 0 773 862 13 982 827 5 936 t 0 0 0 0 0 0 0 0 0 0 0 0 0 207 38 4 13 3 3 50

Zm00001d020267_MA1817.1_JASPAR_rc_shift8 (Zm00001d020267:MA1817.1:JASPAR_rc) 0.712 0.602 3.256 0.893 0.875 1002 337 613 720 897 713.800
; assembly_13 versus Zm00001d020267_MA1817.1_JASPAR_rc (Zm00001d020267:MA1817.1:JASPAR_rc); m=166/229; ncol2=13; w=-1; offset=-1; strand=R; shift=8; score= 713.8; --------gcGGCGGCGGCg ; cor=0.712; Ncor=0.602; logoDP=3.256; NsEucl=0.893; NSW=0.875; rcor=1002; rNcor=337; rlogoDP=613; rNsEucl=720; rNSW=897; rank_mean=713.800; match_rank= a 0 0 0 0 0 0 0 0 2485 1892 420 508 471 329 399 331 351 403 488 1929 c 0 0 0 0 0 0 0 0 3317 7641 760 657 13639 446 632 13656 555 683 13149 2985 g 0 0 0 0 0 0 0 0 6993 3064 13267 13257 233 13749 13462 247 13624 13416 711 8346 t 0 0 0 0 0 0 0 0 2006 2204 354 379 458 277 308 567 271 299 453 1541

Zm00001d020267_MA1817.2_JASPAR_rc_shift10 (Zm00001d020267:MA1817.2:JASPAR_rc) 0.722 0.657 2.671 0.886 0.869 928 178 698 830 943 715.400
; assembly_13 versus Zm00001d020267_MA1817.2_JASPAR_rc (Zm00001d020267:MA1817.2:JASPAR_rc); m=167/229; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 715.4; ----------GGCGGCGGCg ; cor=0.722; Ncor=0.657; logoDP=2.671; NsEucl=0.886; NSW=0.869; rcor=928; rNcor=178; rlogoDP=698; rNsEucl=830; rNSW=943; rank_mean=715.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 420 508 471 329 399 331 351 403 488 1929 c 0 0 0 0 0 0 0 0 0 0 760 657 13639 446 632 13656 555 683 13149 2985 g 0 0 0 0 0 0 0 0 0 0 13267 13257 233 13749 13462 247 13624 13416 711 8346 t 0 0 0 0 0 0 0 0 0 0 354 379 458 277 308 567 271 299 453 1541

LOB_MA2022.1_JASPAR_rc_shift4 (LOB:MA2022.1:JASPAR_rc) 0.764 0.495 0.272 0.905 0.901 700 734 1022 492 637 717.000
; assembly_13 versus LOB_MA2022.1_JASPAR_rc (LOB:MA2022.1:JASPAR_rc); m=168/229; ncol2=17; w=-5; offset=-5; strand=R; shift=4; score= 717; ----ggcrgckGCGGCGGCG ; cor=0.764; Ncor=0.495; logoDP=0.272; NsEucl=0.905; NSW=0.901; rcor=700; rNcor=734; rlogoDP=1022; rNsEucl=492; rNSW=637; rank_mean=717.000; match_rank= a 0 0 0 0 167 140 178 261 113 101 103 50 24 27 16 23 24 18 133 86 c 0 0 0 0 87 96 373 56 71 532 44 38 733 8 7 729 4 10 552 24 g 0 0 0 0 382 463 74 331 538 33 398 693 1 721 768 4 739 760 18 569 t 0 0 0 0 159 96 170 147 73 129 250 14 37 39 4 39 28 7 92 116

HRD_M0019_1.02_CISBP_rc_shift12 (HRD:M0019_1.02:CISBP_rc) 0.738 0.492 1.399 0.894 0.909 829 745 797 715 529 723.000
; assembly_13 versus HRD_M0019_1.02_CISBP_rc (HRD:M0019_1.02:CISBP_rc); m=169/229; ncol2=9; w=0; offset=3; strand=R; shift=12; score= 723; ------------tGtCGGya ; cor=0.738; Ncor=0.492; logoDP=1.399; NsEucl=0.894; NSW=0.909; rcor=829; rNcor=745; rlogoDP=797; rNsEucl=715; rNSW=529; rank_mean=723.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 20 10 15 3 3 9 8 41 c 0 0 0 0 0 0 0 0 0 0 0 0 22 10 8 90 5 2 57 19 g 0 0 0 0 0 0 0 0 0 0 0 0 16 71 23 3 88 89 4 23 t 0 0 0 0 0 0 0 0 0 0 0 0 42 9 54 4 4 0 31 17

EREB2_Mo17_1_EEAD0346_EEADannot_rc_shift10 (EREB2_Mo17_1:EEAD0346:EEADannot_rc) 0.762 0.476 2.637 0.896 0.891 710 797 701 677 741 725.200
; assembly_13 versus EREB2_Mo17_1_EEAD0346_EEADannot_rc (EREB2_Mo17_1:EEAD0346:EEADannot_rc); m=170/229; ncol2=15; w=0; offset=1; strand=R; shift=10; score= 725.2; ----------GrCGGCGGCG ; cor=0.762; Ncor=0.476; logoDP=2.637; NsEucl=0.896; NSW=0.891; rcor=710; rNcor=797; rlogoDP=701; rNsEucl=677; rNSW=741; rank_mean=725.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 4 25 13 3 7 1 0 8 6 3 c 0 0 0 0 0 0 0 0 0 0 10 8 71 0 0 95 1 4 86 0 g 0 0 0 0 0 0 0 0 0 0 79 60 2 97 89 0 97 85 0 96 t 0 0 0 0 0 0 0 0 0 0 7 7 14 0 4 4 2 3 8 1

IG1_MA2418.1_JASPAR_rc_shift12 (IG1:MA2418.1:JASPAR_rc) 0.777 0.518 2.464 0.882 0.889 635 654 722 866 763 728.000
; assembly_13 versus IG1_MA2418.1_JASPAR_rc (IG1:MA2418.1:JASPAR_rc); m=171/229; ncol2=9; w=0; offset=3; strand=R; shift=12; score= 728; ------------TGGCGGCa ; cor=0.777; Ncor=0.518; logoDP=2.464; NsEucl=0.882; NSW=0.889; rcor=635; rNcor=654; rlogoDP=722; rNsEucl=866; rNSW=763; rank_mean=728.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 274 103 110 151 194 106 142 5426 c 0 0 0 0 0 0 0 0 0 0 0 0 1478 218 188 7736 237 293 7717 663 g 0 0 0 0 0 0 0 0 0 0 0 0 443 7732 7805 114 7586 7665 217 1865 t 0 0 0 0 0 0 0 0 0 0 0 0 5972 114 64 166 150 103 91 213

EREB138_Mo17_1_EEAD0332_EEADannot_rc_shift9 (EREB138_Mo17_1:EEAD0332:EEADannot_rc) 0.721 0.529 1.565 0.901 0.892 936 604 786 578 738 728.400
; assembly_13 versus EREB138_Mo17_1_EEAD0332_EEADannot_rc (EREB138_Mo17_1:EEAD0332:EEADannot_rc); m=172/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 728.4; ---------cGrCGGCGGCG ; cor=0.721; Ncor=0.529; logoDP=1.565; NsEucl=0.901; NSW=0.892; rcor=936; rNcor=604; rlogoDP=786; rNsEucl=578; rNSW=738; rank_mean=728.400; match_rank= a 0 0 0 0 0 0 0 0 0 11 5 26 8 5 14 3 4 14 6 8 c 0 0 0 0 0 0 0 0 0 58 4 0 74 0 6 83 0 3 82 0 g 0 0 0 0 0 0 0 0 0 15 86 67 3 93 70 0 96 81 3 92 t 0 0 0 0 0 0 0 0 0 16 5 7 15 2 10 14 0 2 9 0

CRF4.DAP_M0131_AthalianaCistrome_rc_shift0 (CRF4.DAP:M0131:AthalianaCistrome_rc) 0.770 0.403 0.615 0.908 0.906 668 1071 918 434 574 733.000
; assembly_13 versus CRF4.DAP_M0131_AthalianaCistrome_rc (CRF4.DAP:M0131:AthalianaCistrome_rc); m=173/229; ncol2=21; w=-9; offset=-9; strand=R; shift=0; score= 733; cgGmgghgGyGGCGGCGGmg ; cor=0.770; Ncor=0.403; logoDP=0.615; NsEucl=0.908; NSW=0.906; rcor=668; rNcor=1071; rlogoDP=918; rNsEucl=434; rNSW=574; rank_mean=733.000; match_rank= a 51 46 26 65 39 47 62 44 45 24 3 36 6 0 0 24 7 8 92 34 c 91 22 25 95 24 17 88 26 9 105 0 0 208 0 0 174 0 22 77 0 g 34 144 162 18 107 127 10 125 159 10 207 190 0 226 226 2 207 185 13 144 t 50 14 13 48 56 35 66 31 13 87 16 0 12 0 0 26 12 11 44 48

ERF115.DAP_M0081_AthalianaCistrome_rc_shift6 (ERF115.DAP:M0081:AthalianaCistrome_rc) 0.712 0.522 0.941 0.904 0.898 1003 633 867 520 669 738.400
; assembly_13 versus ERF115.DAP_M0081_AthalianaCistrome_rc (ERF115.DAP:M0081:AthalianaCistrome_rc); m=174/229; ncol2=15; w=-3; offset=-3; strand=R; shift=6; score= 738.4; ------cGGcgrygRCGGCG ; cor=0.712; Ncor=0.522; logoDP=0.941; NsEucl=0.904; NSW=0.898; rcor=1003; rNcor=633; rlogoDP=867; rNsEucl=520; rNSW=669; rank_mean=738.400; match_rank= a 0 0 0 0 0 0 75 73 106 132 96 187 97 57 160 17 0 10 37 15 c 0 0 0 0 0 0 360 33 14 345 20 15 244 5 8 532 0 25 497 8 g 0 0 0 0 0 0 37 436 449 10 368 350 7 406 426 0 585 556 0 527 t 0 0 0 0 0 0 127 57 30 112 115 47 251 131 5 50 14 8 65 49

ESE1.ampDAP_M0133_AthalianaCistrome_shift7 (ESE1.ampDAP:M0133:AthalianaCistrome) 0.739 0.406 4.988 0.898 0.886 822 1054 390 637 794 739.400
; assembly_13 versus ESE1.ampDAP_M0133_AthalianaCistrome (ESE1.ampDAP:M0133:AthalianaCistrome); m=175/229; ncol2=20; w=-2; offset=-2; strand=D; shift=7; score= 739.4; -------rryGGCGGCGGcg ; cor=0.739; Ncor=0.406; logoDP=4.988; NsEucl=0.898; NSW=0.886; rcor=822; rNcor=1054; rlogoDP=390; rNsEucl=637; rNSW=794; rank_mean=739.400; match_rank= a 0 0 0 0 0 0 0 68 96 48 0 21 0 0 0 7 4 27 61 40 c 0 0 0 0 0 0 0 28 15 122 0 0 254 0 0 246 2 50 123 11 g 0 0 0 0 0 0 0 111 131 4 260 239 0 255 260 0 239 182 20 167 t 0 0 0 0 0 0 0 53 18 86 0 0 6 5 0 7 15 1 56 42

ATERF15_M0017_1.02_CISBP_shift12 (ATERF15:M0017_1.02:CISBP) 0.728 0.530 2.416 0.887 0.898 892 600 726 815 670 740.600
; assembly_13 versus ATERF15_M0017_1.02_CISBP (ATERF15:M0017_1.02:CISBP); m=176/229; ncol2=8; w=0; offset=3; strand=D; shift=12; score= 740.6; ------------cGsCGGCc ; cor=0.728; Ncor=0.530; logoDP=2.416; NsEucl=0.887; NSW=0.898; rcor=892; rNcor=600; rlogoDP=726; rNsEucl=815; rNSW=670; rank_mean=740.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 20 3 2 3 8 3 3 10 c 0 0 0 0 0 0 0 0 0 0 0 0 50 5 61 89 3 23 91 59 g 0 0 0 0 0 0 0 0 0 0 0 0 13 89 34 5 84 71 3 17 t 0 0 0 0 0 0 0 0 0 0 0 0 17 3 3 3 5 3 3 14

EREB4_B73_1_m1_EEAD0353_EEADannot_shift11 (EREB4_B73_1_m1:EEAD0353:EEADannot) 0.758 0.401 3.352 0.896 0.902 724 1080 598 681 625 741.600
; assembly_13 versus EREB4_B73_1_m1_EEAD0353_EEADannot (EREB4_B73_1_m1:EEAD0353:EEADannot); m=177/229; ncol2=15; w=0; offset=2; strand=D; shift=11; score= 741.6; -----------gyGgCGGyG ; cor=0.758; Ncor=0.401; logoDP=3.352; NsEucl=0.896; NSW=0.902; rcor=724; rNcor=1080; rlogoDP=598; rNsEucl=681; rNSW=625; rank_mean=741.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 18 10 5 8 2 4 7 3 0 c 0 0 0 0 0 0 0 0 0 0 0 14 55 0 5 80 0 0 52 0 g 0 0 0 0 0 0 0 0 0 0 0 57 3 93 65 4 96 89 3 100 t 0 0 0 0 0 0 0 0 0 0 0 11 32 2 22 14 0 4 42 0

ERF118_MA1671.2_JASPAR_rc_shift10 (ERF118:MA1671.2:JASPAR_rc) 0.786 0.572 0.222 0.882 0.888 576 459 1049 877 776 747.400
; assembly_13 versus ERF118_MA1671.2_JASPAR_rc (ERF118:MA1671.2:JASPAR_rc); m=178/229; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 747.4; ----------gGCGGCGg-- ; cor=0.786; Ncor=0.572; logoDP=0.222; NsEucl=0.882; NSW=0.888; rcor=576; rNcor=459; rlogoDP=1049; rNsEucl=877; rNSW=776; rank_mean=747.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 617 48 30 7 1 10 26 482 0 0 c 0 0 0 0 0 0 0 0 0 0 286 11 3190 3 2 3186 0 354 0 0 g 0 0 0 0 0 0 0 0 0 0 1903 3338 9 3370 3396 8 3343 2309 0 0 t 0 0 0 0 0 0 0 0 0 0 593 2 170 19 0 195 30 254 0 0

AT1G71450_MA1233.1_JASPAR_rc_shift9 (AT1G71450:MA1233.1:JASPAR_rc) 0.728 0.400 0.893 0.910 0.912 896 1085 877 379 504 748.200
; assembly_13 versus AT1G71450_MA1233.1_JASPAR_rc (AT1G71450:MA1233.1:JASPAR_rc); m=179/229; ncol2=20; w=0; offset=0; strand=R; shift=9; score= 748.2; ---------yGrCGGyGrhG ; cor=0.728; Ncor=0.400; logoDP=0.893; NsEucl=0.910; NSW=0.912; rcor=896; rNcor=1085; rlogoDP=877; rNsEucl=379; rNSW=504; rank_mean=748.200; match_rank= a 0 0 0 0 0 0 0 0 0 96 20 159 43 14 24 78 65 153 166 72 c 0 0 0 0 0 0 0 0 0 189 3 24 445 4 14 238 5 38 205 24 g 0 0 0 0 0 0 0 0 0 9 526 290 5 526 507 3 463 340 32 406 t 0 0 0 0 0 0 0 0 0 274 19 95 75 24 23 249 35 37 165 66

DREB2A_MA1258.2_JASPAR_shift11 (DREB2A:MA1258.2:JASPAR) 0.707 0.579 4.783 0.879 0.868 1040 429 423 901 951 748.800
; assembly_13 versus DREB2A_MA1258.2_JASPAR (DREB2A:MA1258.2:JASPAR); m=180/229; ncol2=9; w=0; offset=2; strand=D; shift=11; score= 748.8; -----------rwGkCGGTG ; cor=0.707; Ncor=0.579; logoDP=4.783; NsEucl=0.879; NSW=0.868; rcor=1040; rNcor=429; rlogoDP=423; rNsEucl=901; rNSW=951; rank_mean=748.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 360 219 0 18 2 0 1 0 16 c 0 0 0 0 0 0 0 0 0 0 0 9 19 0 0 579 0 0 78 25 g 0 0 0 0 0 0 0 0 0 0 0 162 35 581 226 0 581 580 0 413 t 0 0 0 0 0 0 0 0 0 0 0 50 308 0 337 0 0 0 503 127

DREB2D_MA1250.2_JASPAR_rc_shift10 (DREB2D:MA1250.2:JASPAR_rc) 0.757 0.504 0.217 0.899 0.899 734 702 1053 612 661 752.400
; assembly_13 versus DREB2D_MA1250.2_JASPAR_rc (DREB2D:MA1250.2:JASPAR_rc); m=181/229; ncol2=14; w=0; offset=1; strand=R; shift=10; score= 752.4; ----------GgCGGYGGmg ; cor=0.757; Ncor=0.504; logoDP=0.217; NsEucl=0.899; NSW=0.899; rcor=734; rNcor=702; rlogoDP=1053; rNsEucl=612; rNSW=661; rank_mean=752.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 133 107 6 0 2 1 0 31 221 93 c 0 0 0 0 0 0 0 0 0 0 8 10 519 0 1 160 0 18 205 30 g 0 0 0 0 0 0 0 0 0 0 395 366 0 556 554 0 551 489 13 360 t 0 0 0 0 0 0 0 0 0 0 21 74 32 1 0 396 6 19 118 74

AT2G33710_MA1245.2_JASPAR_rc_shift8 (AT2G33710:MA1245.2:JASPAR_rc) 0.711 0.593 2.647 0.888 0.875 1013 372 699 801 893 755.600
; assembly_13 versus AT2G33710_MA1245.2_JASPAR_rc (AT2G33710:MA1245.2:JASPAR_rc); m=182/229; ncol2=11; w=-1; offset=-1; strand=R; shift=8; score= 755.6; --------ryGGCGGCGgh- ; cor=0.711; Ncor=0.593; logoDP=2.647; NsEucl=0.888; NSW=0.875; rcor=1013; rNcor=372; rlogoDP=699; rNsEucl=801; rNSW=893; rank_mean=755.600; match_rank= a 0 0 0 0 0 0 0 0 783 327 48 28 37 7 3 49 48 410 657 0 c 0 0 0 0 0 0 0 0 243 1264 3 14 2236 1 37 2173 33 361 895 0 g 0 0 0 0 0 0 0 0 1165 73 2406 2446 3 2449 2454 20 2246 1507 302 0 t 0 0 0 0 0 0 0 0 304 831 38 7 219 38 1 253 168 217 641 0

ERF3_MA1005.2_JASPAR_rc_shift8 (ERF3:MA1005.2:JASPAR_rc) 0.711 0.593 2.729 0.888 0.873 1009 370 690 809 911 757.800
; assembly_13 versus ERF3_MA1005.2_JASPAR_rc (ERF3:MA1005.2:JASPAR_rc); m=183/229; ncol2=11; w=-1; offset=-1; strand=R; shift=8; score= 757.8; --------ryGGCGGCGgh- ; cor=0.711; Ncor=0.593; logoDP=2.729; NsEucl=0.888; NSW=0.873; rcor=1009; rNcor=370; rlogoDP=690; rNsEucl=809; rNSW=911; rank_mean=757.800; match_rank= a 0 0 0 0 0 0 0 0 563 252 18 22 35 8 2 31 41 319 491 0 c 0 0 0 0 0 0 0 0 194 925 1 7 1697 1 3 1658 16 257 644 0 g 0 0 0 0 0 0 0 0 887 48 1852 1852 2 1844 1878 8 1713 1145 229 0 t 0 0 0 0 0 0 0 0 239 658 12 2 149 30 0 186 113 162 519 0

Zm00001d024324_MA1820.1_JASPAR_rc_shift9 (Zm00001d024324:MA1820.1:JASPAR_rc) 0.718 0.607 0.344 0.895 0.878 959 315 978 697 857 761.200
; assembly_13 versus Zm00001d024324_MA1820.1_JASPAR_rc (Zm00001d024324:MA1820.1:JASPAR_rc); m=184/229; ncol2=13; w=0; offset=0; strand=R; shift=9; score= 761.2; ---------cgGCGGCGGCG ; cor=0.718; Ncor=0.607; logoDP=0.344; NsEucl=0.895; NSW=0.878; rcor=959; rNcor=315; rlogoDP=978; rNsEucl=697; rNSW=857; rank_mean=761.200; match_rank= a 0 0 0 0 0 0 0 0 0 3206 2945 949 761 623 792 609 593 627 714 676 c 0 0 0 0 0 0 0 0 0 11092 5360 1113 20848 864 1100 21141 695 934 20748 959 g 0 0 0 0 0 0 0 0 0 5407 11929 19965 425 20733 20319 350 20957 20683 627 20536 t 0 0 0 0 0 0 0 0 0 3014 2485 692 685 499 508 619 474 475 630 548

EREB183_ZmPUCHI_B73_1_m1_EEAD0337_EEADannot_rc_shift11 (EREB183_ZmPUCHI_B73_1_m1:EEAD0337:EEADannot_rc) 0.793 0.420 0.281 0.897 0.904 538 1005 1016 655 599 762.600
; assembly_13 versus EREB183_ZmPUCHI_B73_1_m1_EEAD0337_EEADannot_rc (EREB183_ZmPUCHI_B73_1_m1:EEAD0337:EEADannot_rc); m=185/229; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 762.6; -----------GCGGCGGCG ; cor=0.793; Ncor=0.420; logoDP=0.281; NsEucl=0.897; NSW=0.904; rcor=538; rNcor=1005; rlogoDP=1016; rNsEucl=655; rNSW=599; rank_mean=762.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 17 2 2 4 2 2 9 5 5 c 0 0 0 0 0 0 0 0 0 0 0 5 88 4 1 92 2 8 76 1 g 0 0 0 0 0 0 0 0 0 0 0 70 4 92 92 0 94 77 7 92 t 0 0 0 0 0 0 0 0 0 0 0 8 6 2 3 6 2 6 12 2

ERF104_MA1239.1_JASPAR_rc_shift7 (ERF104:MA1239.1:JASPAR_rc) 0.747 0.432 0.955 0.903 0.896 787 951 864 536 681 763.800
; assembly_13 versus ERF104_MA1239.1_JASPAR_rc (ERF104:MA1239.1:JASPAR_rc); m=186/229; ncol2=19; w=-2; offset=-2; strand=R; shift=7; score= 763.8; -------rryGGCGGCGgmg ; cor=0.747; Ncor=0.432; logoDP=0.955; NsEucl=0.903; NSW=0.896; rcor=787; rNcor=951; rlogoDP=864; rNsEucl=536; rNSW=681; rank_mean=763.800; match_rank= a 0 0 0 0 0 0 0 149 192 62 0 89 3 0 0 25 5 90 169 75 c 0 0 0 0 0 0 0 60 51 281 0 0 527 0 2 496 6 76 213 33 g 0 0 0 0 0 0 0 218 274 0 553 466 0 557 555 0 464 369 50 363 t 0 0 0 0 0 0 0 130 40 214 4 2 27 0 0 36 82 22 125 86

RAP2.6_M0010_1.02_CISBP_rc_shift10 (RAP2.6:M0010_1.02:CISBP_rc) 0.748 0.544 0.190 0.889 0.901 778 552 1067 796 636 765.800
; assembly_13 versus RAP2.6_M0010_1.02_CISBP_rc (RAP2.6:M0010_1.02:CISBP_rc); m=187/229; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 765.8; ----------gmCgGCrs-- ; cor=0.748; Ncor=0.544; logoDP=0.190; NsEucl=0.889; NSW=0.901; rcor=778; rNcor=552; rlogoDP=1067; rNsEucl=796; rNSW=636; rank_mean=765.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 22 27 7 23 13 0 33 24 0 0 c 0 0 0 0 0 0 0 0 0 0 10 36 70 11 5 95 18 32 0 0 g 0 0 0 0 0 0 0 0 0 0 48 19 9 63 78 0 38 26 0 0 t 0 0 0 0 0 0 0 0 0 0 20 18 14 3 4 5 11 18 0 0

ERF1_ERF1_ArabidopsisPBM_rc_shift12 (ERF1:ERF1:ArabidopsisPBM_rc) 0.795 0.489 0.233 0.885 0.895 522 754 1046 834 695 770.200
; assembly_13 versus ERF1_ERF1_ArabidopsisPBM_rc (ERF1:ERF1:ArabidopsisPBM_rc); m=188/229; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 770.2; ------------tGGCGGCG ; cor=0.795; Ncor=0.489; logoDP=0.233; NsEucl=0.885; NSW=0.895; rcor=522; rNcor=754; rlogoDP=1046; rNsEucl=834; rNSW=695; rank_mean=770.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 13 1 3 1 1 1 1 2 c 0 0 0 0 0 0 0 0 0 0 0 0 24 1 2 97 0 2 97 1 g 0 0 0 0 0 0 0 0 0 0 0 0 5 97 90 0 95 96 1 82 t 0 0 0 0 0 0 0 0 0 0 0 0 58 1 5 2 4 1 1 15

EREB138_B73_1_m1_EEAD0331_EEADannot_rc_shift8 (EREB138_B73_1_m1:EEAD0331:EEADannot_rc) 0.726 0.532 0.234 0.901 0.891 904 596 1045 585 743 774.600
; assembly_13 versus EREB138_B73_1_m1_EEAD0331_EEADannot_rc (EREB138_B73_1_m1:EEAD0331:EEADannot_rc); m=189/229; ncol2=15; w=-1; offset=-1; strand=R; shift=8; score= 774.6; --------rcGgCGGCGGCG ; cor=0.726; Ncor=0.532; logoDP=0.234; NsEucl=0.901; NSW=0.891; rcor=904; rNcor=596; rlogoDP=1045; rNsEucl=585; rNSW=743; rank_mean=774.600; match_rank= a 0 0 0 0 0 0 0 0 30 14 6 21 8 3 17 4 1 16 0 7 c 0 0 0 0 0 0 0 0 8 62 10 9 71 0 2 88 0 3 90 1 g 0 0 0 0 0 0 0 0 44 12 77 60 2 97 78 0 97 78 2 91 t 0 0 0 0 0 0 0 0 18 12 7 10 19 0 3 8 2 3 8 1

Zm00001d049364_MA1833.1_JASPAR_rc_shift7 (Zm00001d049364:MA1833.1:JASPAR_rc) 0.719 0.494 2.759 0.895 0.879 953 736 687 691 850 783.400
; assembly_13 versus Zm00001d049364_MA1833.1_JASPAR_rc (Zm00001d049364:MA1833.1:JASPAR_rc); m=190/229; ncol2=16; w=-2; offset=-2; strand=R; shift=7; score= 783.4; -------ggyGGCGGCGGCg ; cor=0.719; Ncor=0.494; logoDP=2.759; NsEucl=0.895; NSW=0.879; rcor=953; rNcor=736; rlogoDP=687; rNsEucl=691; rNSW=850; rank_mean=783.400; match_rank= a 0 0 0 0 0 0 0 2459 3070 2162 624 544 559 516 441 525 510 424 681 2187 c 0 0 0 0 0 0 0 4550 4110 8879 1008 777 17121 612 593 17063 607 601 16187 2975 g 0 0 0 0 0 0 0 9497 9179 2765 16513 16869 321 17013 17272 366 17025 17229 1027 9771 t 0 0 0 0 0 0 0 2100 2247 4800 461 416 605 465 300 652 464 352 711 3673

AT5G18450_MA1226.1_JASPAR_shift4 (AT5G18450:MA1226.1:JASPAR) 0.713 0.445 4.668 0.891 0.880 995 910 431 764 838 787.600
; assembly_13 versus AT5G18450_MA1226.1_JASPAR (AT5G18450:MA1226.1:JASPAR); m=191/229; ncol2=15; w=-5; offset=-5; strand=D; shift=4; score= 787.6; ----ggyggarGCGGYGGm- ; cor=0.713; Ncor=0.445; logoDP=4.668; NsEucl=0.891; NSW=0.880; rcor=995; rNcor=910; rlogoDP=431; rNsEucl=764; rNSW=838; rank_mean=787.600; match_rank= a 0 0 0 0 95 88 137 84 98 304 185 34 21 0 0 25 0 54 237 0 c 0 0 0 0 41 54 179 49 42 133 0 0 509 0 0 156 0 38 156 0 g 0 0 0 0 357 371 58 312 386 12 395 531 0 587 587 0 584 491 50 0 t 0 0 0 0 94 74 213 142 61 138 7 22 57 0 0 406 3 4 144 0

EREB149_Mo17_1_EEAD0336_EEADannot_shift10 (EREB149_Mo17_1:EEAD0336:EEADannot) 0.722 0.481 3.928 0.887 0.873 932 776 521 813 916 791.600
; assembly_13 versus EREB149_Mo17_1_EEAD0336_EEADannot (EREB149_Mo17_1:EEAD0336:EEADannot); m=192/229; ncol2=14; w=0; offset=1; strand=D; shift=10; score= 791.6; ----------GGCGGCGGCG ; cor=0.722; Ncor=0.481; logoDP=3.928; NsEucl=0.887; NSW=0.873; rcor=932; rNcor=776; rlogoDP=521; rNsEucl=813; rNSW=916; rank_mean=791.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 3 17 4 6 12 5 1 12 6 4 c 0 0 0 0 0 0 0 0 0 0 4 0 86 0 2 82 0 3 86 0 g 0 0 0 0 0 0 0 0 0 0 85 79 1 90 84 1 97 83 2 95 t 0 0 0 0 0 0 0 0 0 0 8 4 9 4 2 12 2 2 6 1

Zm00001d049364_MA1833.2_JASPAR_rc_shift10 (Zm00001d049364:MA1833.2:JASPAR_rc) 0.726 0.605 0.325 0.887 0.872 903 323 992 818 923 791.800
; assembly_13 versus Zm00001d049364_MA1833.2_JASPAR_rc (Zm00001d049364:MA1833.2:JASPAR_rc); m=193/229; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 791.8; ----------GGCGGCGGCg ; cor=0.726; Ncor=0.605; logoDP=0.325; NsEucl=0.887; NSW=0.872; rcor=903; rNcor=323; rlogoDP=992; rNsEucl=818; rNSW=923; rank_mean=791.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 624 544 559 516 441 525 510 424 681 2187 c 0 0 0 0 0 0 0 0 0 0 1008 777 17121 612 593 17063 607 601 16187 2975 g 0 0 0 0 0 0 0 0 0 0 16513 16869 321 17013 17272 366 17025 17229 1027 9771 t 0 0 0 0 0 0 0 0 0 0 461 416 605 465 300 652 464 352 711 3673

Zm00001d024324_MA1820.2_JASPAR_rc_shift11 (Zm00001d024324:MA1820.2:JASPAR_rc) 0.741 0.606 0.341 0.878 0.867 809 319 979 905 956 793.600
; assembly_13 versus Zm00001d024324_MA1820.2_JASPAR_rc (Zm00001d024324:MA1820.2:JASPAR_rc); m=194/229; ncol2=9; w=0; offset=2; strand=R; shift=11; score= 793.6; -----------GCGGCGGCG ; cor=0.741; Ncor=0.606; logoDP=0.341; NsEucl=0.878; NSW=0.867; rcor=809; rNcor=319; rlogoDP=979; rNsEucl=905; rNSW=956; rank_mean=793.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 949 761 623 792 609 593 627 714 676 c 0 0 0 0 0 0 0 0 0 0 0 1113 20848 864 1100 21141 695 934 20748 959 g 0 0 0 0 0 0 0 0 0 0 0 19965 425 20733 20319 350 20957 20683 627 20536 t 0 0 0 0 0 0 0 0 0 0 0 692 685 499 508 619 474 475 630 548

RAP2.6_RAP2.6_3_ArabidopsisPBM_shift7 (RAP2.6:RAP2.6_3:ArabidopsisPBM) 0.736 0.453 3.766 0.880 0.885 846 883 551 891 798 793.800
; assembly_13 versus RAP2.6_RAP2.6_3_ArabidopsisPBM (RAP2.6:RAP2.6_3:ArabidopsisPBM); m=195/229; ncol2=10; w=-2; offset=-2; strand=D; shift=7; score= 793.8; -------cATGACGGCw--- ; cor=0.736; Ncor=0.453; logoDP=3.766; NsEucl=0.880; NSW=0.885; rcor=846; rNcor=883; rlogoDP=551; rNsEucl=891; rNSW=798; rank_mean=793.800; match_rank= a 0 0 0 0 0 0 0 22 69 14 14 68 1 0 1 1 50 0 0 0 c 0 0 0 0 0 0 0 50 9 2 1 8 98 1 1 96 16 0 0 0 g 0 0 0 0 0 0 0 9 8 13 72 7 0 96 97 0 2 0 0 0 t 0 0 0 0 0 0 0 19 14 71 13 17 1 3 1 3 32 0 0 0

RAP2.3_RAP2.3_2_ArabidopsisPBM_rc_shift11 (RAP2.3:RAP2.3_2:ArabidopsisPBM_rc) 0.707 0.530 3.493 0.882 0.875 1045 598 581 867 890 796.200
; assembly_13 versus RAP2.3_RAP2.3_2_ArabidopsisPBM_rc (RAP2.3:RAP2.3_2:ArabidopsisPBM_rc); m=196/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 796.2; -----------wtkGCGGCk ; cor=0.707; Ncor=0.530; logoDP=3.493; NsEucl=0.882; NSW=0.875; rcor=1045; rNcor=598; rlogoDP=581; rNsEucl=867; rNSW=890; rank_mean=796.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 36 20 4 8 1 0 1 0 6 c 0 0 0 0 0 0 0 0 0 0 0 9 11 1 3 97 1 3 99 3 g 0 0 0 0 0 0 0 0 0 0 0 17 7 67 87 1 98 96 1 57 t 0 0 0 0 0 0 0 0 0 0 0 38 62 28 2 1 1 0 0 34

RRTF1_RRTF1_3_ArabidopsisPBM_rc_shift11 (RRTF1:RRTF1_3:ArabidopsisPBM_rc) 0.716 0.537 3.976 0.876 0.862 969 579 518 928 991 797.000
; assembly_13 versus RRTF1_RRTF1_3_ArabidopsisPBM_rc (RRTF1:RRTF1_3:ArabidopsisPBM_rc); m=197/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 797; -----------aTGGCGGCG ; cor=0.716; Ncor=0.537; logoDP=3.976; NsEucl=0.876; NSW=0.862; rcor=969; rNcor=579; rlogoDP=518; rNsEucl=928; rNSW=991; rank_mean=797.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 67 7 6 11 0 1 0 1 1 c 0 0 0 0 0 0 0 0 0 0 0 3 8 0 1 98 0 3 99 2 g 0 0 0 0 0 0 0 0 0 0 0 8 4 77 81 1 97 97 0 92 t 0 0 0 0 0 0 0 0 0 0 0 22 81 17 7 1 2 0 0 5

LBD19_IG1_AS2_Mo17_1_EEAD0422_EEADannot_rc_shift4 (LBD19_IG1_AS2_Mo17_1:EEAD0422:EEADannot_rc) 0.721 0.451 3.014 0.893 0.885 940 889 640 735 807 802.200
; assembly_13 versus LBD19_IG1_AS2_Mo17_1_EEAD0422_EEADannot_rc (LBD19_IG1_AS2_Mo17_1:EEAD0422:EEADannot_rc); m=198/229; ncol2=15; w=-5; offset=-5; strand=R; shift=4; score= 802.2; ----GGCGGCGGCGGCGGc- ; cor=0.721; Ncor=0.451; logoDP=3.014; NsEucl=0.893; NSW=0.885; rcor=940; rNcor=889; rlogoDP=640; rNsEucl=735; rNSW=807; rank_mean=802.200; match_rank= a 0 0 0 0 4 3 6 0 7 15 6 7 17 3 11 12 1 4 17 0 c 0 0 0 0 10 10 94 0 7 72 4 4 74 1 6 80 0 6 63 0 g 0 0 0 0 79 87 0 100 82 5 86 86 4 93 80 2 99 88 15 0 t 0 0 0 0 7 0 0 0 4 8 4 3 5 3 3 6 0 2 5 0

EREB183_ZmPUCHI_Mo17_1_EEAD0338_EEADannot_rc_shift11 (EREB183_ZmPUCHI_Mo17_1:EEAD0338:EEADannot_rc) 0.784 0.415 0.332 0.892 0.894 584 1018 985 752 704 808.600
; assembly_13 versus EREB183_ZmPUCHI_Mo17_1_EEAD0338_EEADannot_rc (EREB183_ZmPUCHI_Mo17_1:EEAD0338:EEADannot_rc); m=199/229; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 808.6; -----------GCGGCGGCG ; cor=0.784; Ncor=0.415; logoDP=0.332; NsEucl=0.892; NSW=0.894; rcor=584; rNcor=1018; rlogoDP=985; rNsEucl=752; rNSW=704; rank_mean=808.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 15 4 3 9 2 2 5 4 3 c 0 0 0 0 0 0 0 0 0 0 0 4 84 0 1 94 0 0 84 0 g 0 0 0 0 0 0 0 0 0 0 0 69 4 93 88 0 97 90 3 95 t 0 0 0 0 0 0 0 0 0 0 0 12 8 4 2 4 1 5 9 2

EREB46_ZmSHINE_B73_1_m1_EEAD0349_EEADannot_shift10 (EREB46_ZmSHINE_B73_1_m1:EEAD0349:EEADannot) 0.718 0.449 3.916 0.889 0.876 957 895 524 793 877 809.200
; assembly_13 versus EREB46_ZmSHINE_B73_1_m1_EEAD0349_EEADannot (EREB46_ZmSHINE_B73_1_m1:EEAD0349:EEADannot); m=200/229; ncol2=15; w=0; offset=1; strand=D; shift=10; score= 809.2; ----------GGCGGCGGCG ; cor=0.718; Ncor=0.449; logoDP=3.916; NsEucl=0.889; NSW=0.876; rcor=957; rNcor=895; rlogoDP=524; rNsEucl=793; rNSW=877; rank_mean=809.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 7 13 9 2 9 5 1 6 9 2 c 0 0 0 0 0 0 0 0 0 0 9 0 77 0 3 71 0 2 77 2 g 0 0 0 0 0 0 0 0 0 0 79 82 1 95 83 3 99 88 2 96 t 0 0 0 0 0 0 0 0 0 0 5 5 13 3 5 21 0 4 12 0

ERF112_MA1245.3_JASPAR_rc_shift9 (ERF112:MA1245.3:JASPAR_rc) 0.711 0.582 2.645 0.876 0.862 1014 421 700 929 992 811.200
; assembly_13 versus ERF112_MA1245.3_JASPAR_rc (ERF112:MA1245.3:JASPAR_rc); m=201/229; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 811.2; ---------yGGCGGCGg-- ; cor=0.711; Ncor=0.582; logoDP=2.645; NsEucl=0.876; NSW=0.862; rcor=1014; rNcor=421; rlogoDP=700; rNsEucl=929; rNSW=992; rank_mean=811.200; match_rank= a 0 0 0 0 0 0 0 0 0 327 48 28 37 7 3 49 48 410 0 0 c 0 0 0 0 0 0 0 0 0 1264 3 14 2236 1 37 2173 33 361 0 0 g 0 0 0 0 0 0 0 0 0 73 2406 2446 3 2449 2454 20 2246 1507 0 0 t 0 0 0 0 0 0 0 0 0 831 38 7 219 38 1 253 168 217 0 0

ETHYLENE_1gcc_A_3D-footprint_shift12 (ETHYLENE:1gcc_A:3D-footprint) 0.732 0.488 4.752 0.867 0.857 873 764 424 987 1010 811.600
; assembly_13 versus ETHYLENE_1gcc_A_3D-footprint (ETHYLENE:1gcc_A:3D-footprint); m=202/229; ncol2=9; w=0; offset=3; strand=D; shift=12; score= 811.6; ------------TGGCGGCT ; cor=0.732; Ncor=0.488; logoDP=4.752; NsEucl=0.867; NSW=0.857; rcor=873; rNcor=764; rlogoDP=424; rNsEucl=987; rNSW=1010; rank_mean=811.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 8 0 8 0 0 0 0 8 c 0 0 0 0 0 0 0 0 0 0 0 0 8 0 8 96 0 0 96 0 g 0 0 0 0 0 0 0 0 0 0 0 0 8 96 72 0 96 96 0 8 t 0 0 0 0 0 0 0 0 0 0 0 0 72 0 8 0 0 0 0 80

ERF082_MA1005.3_JASPAR_rc_shift9 (ERF082:MA1005.3:JASPAR_rc) 0.711 0.582 2.727 0.875 0.860 1012 420 691 941 1001 813.000
; assembly_13 versus ERF082_MA1005.3_JASPAR_rc (ERF082:MA1005.3:JASPAR_rc); m=203/229; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 813; ---------yGGCGGCGg-- ; cor=0.711; Ncor=0.582; logoDP=2.727; NsEucl=0.875; NSW=0.860; rcor=1012; rNcor=420; rlogoDP=691; rNsEucl=941; rNSW=1001; rank_mean=813.000; match_rank= a 0 0 0 0 0 0 0 0 0 252 18 22 35 8 2 31 41 319 0 0 c 0 0 0 0 0 0 0 0 0 925 1 7 1697 1 3 1658 16 257 0 0 g 0 0 0 0 0 0 0 0 0 48 1852 1852 2 1844 1878 8 1713 1145 0 0 t 0 0 0 0 0 0 0 0 0 658 12 2 149 30 0 186 113 162 0 0

AT5G51190_M0040_1.02_CISBP_rc_shift12 (AT5G51190:M0040_1.02:CISBP_rc) 0.718 0.522 3.937 0.866 0.857 962 632 520 988 1011 822.600
; assembly_13 versus AT5G51190_M0040_1.02_CISBP_rc (AT5G51190:M0040_1.02:CISBP_rc); m=204/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 822.6; ------------CGCCGGCm ; cor=0.718; Ncor=0.522; logoDP=3.937; NsEucl=0.866; NSW=0.857; rcor=962; rNcor=632; rlogoDP=520; rNsEucl=988; rNSW=1011; rank_mean=822.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 62 c 0 0 0 0 0 0 0 0 0 0 0 0 70 0 86 100 7 0 100 25 g 0 0 0 0 0 0 0 0 0 0 0 0 10 100 14 0 93 100 0 13 t 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0

NAC74_Mo17_1_EEAD0488_EEADannot_rc_shift7 (NAC74_Mo17_1:EEAD0488:EEADannot_rc) 0.735 0.509 0.208 0.890 0.891 854 689 1055 774 744 823.200
; assembly_13 versus NAC74_Mo17_1_EEAD0488_EEADannot_rc (NAC74_Mo17_1:EEAD0488:EEADannot_rc); m=205/229; ncol2=11; w=-2; offset=-2; strand=R; shift=7; score= 823.2; -------grCGrYGsCGk-- ; cor=0.735; Ncor=0.509; logoDP=0.208; NsEucl=0.890; NSW=0.891; rcor=854; rNcor=689; rlogoDP=1055; rNsEucl=774; rNSW=744; rank_mean=823.200; match_rank= a 0 0 0 0 0 0 0 12 32 10 14 44 0 6 22 0 0 11 0 0 c 0 0 0 0 0 0 0 18 13 82 0 1 75 0 31 93 0 5 0 0 g 0 0 0 0 0 0 0 59 42 3 86 55 0 94 45 1 100 40 0 0 t 0 0 0 0 0 0 0 11 13 5 0 0 25 0 2 6 0 44 0 0

ERF105_MA1000.1_JASPAR_rc_shift12 (ERF105:MA1000.1:JASPAR_rc) 0.718 0.522 3.854 0.867 0.858 960 631 535 983 1007 823.200
; assembly_13 versus ERF105_MA1000.1_JASPAR_rc (ERF105:MA1000.1:JASPAR_rc); m=206/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 823.2; ------------CGCCGGCm ; cor=0.718; Ncor=0.522; logoDP=3.854; NsEucl=0.867; NSW=0.858; rcor=960; rNcor=631; rlogoDP=535; rNsEucl=983; rNSW=1007; rank_mean=823.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 101 1 1 1 1 1 1 623 c 0 0 0 0 0 0 0 0 0 0 0 0 698 1 855 998 72 1 998 250 g 0 0 0 0 0 0 0 0 0 0 0 0 101 998 143 1 927 998 1 126 t 0 0 0 0 0 0 0 0 0 0 0 0 101 1 1 1 1 1 1 1

ERF017_MA1234.2_JASPAR_shift8 (ERF017:MA1234.2:JASPAR) 0.718 0.479 4.094 0.872 0.869 954 786 505 959 942 829.200
; assembly_13 versus ERF017_MA1234.2_JASPAR (ERF017:MA1234.2:JASPAR); m=207/229; ncol2=9; w=-1; offset=-1; strand=D; shift=8; score= 829.2; --------tgGwCGGyG--- ; cor=0.718; Ncor=0.479; logoDP=4.094; NsEucl=0.872; NSW=0.869; rcor=954; rNcor=786; rlogoDP=505; rNsEucl=959; rNSW=942; rank_mean=829.200; match_rank= a 0 0 0 0 0 0 0 0 127 47 0 291 0 0 0 43 27 0 0 0 c 0 0 0 0 0 0 0 0 34 19 0 79 599 0 0 185 9 0 0 0 g 0 0 0 0 0 0 0 0 53 403 599 42 0 599 599 0 524 0 0 0 t 0 0 0 0 0 0 0 0 385 130 0 187 0 0 0 371 39 0 0 0

ERF076_MA1001.4_JASPAR_rc_shift11 (ERF076:MA1001.4:JASPAR_rc) 0.711 0.534 3.090 0.876 0.861 1007 589 630 937 998 832.200
; assembly_13 versus ERF076_MA1001.4_JASPAR_rc (ERF076:MA1001.4:JASPAR_rc); m=208/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 832.2; -----------GyGGCGGCG ; cor=0.711; Ncor=0.534; logoDP=3.090; NsEucl=0.876; NSW=0.861; rcor=1007; rNcor=589; rlogoDP=630; rNsEucl=937; rNSW=998; rank_mean=832.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 157 81 18 74 24 6 9 38 109 c 0 0 0 0 0 0 0 0 0 0 0 45 435 11 9 1271 5 13 1270 63 g 0 0 0 0 0 0 0 0 0 0 0 1086 5 1304 1281 2 1346 1347 6 1008 t 0 0 0 0 0 0 0 0 0 0 0 85 852 40 9 76 16 4 59 193

EREB145_ZmSHINE_B73_1_m1_EEAD0333_EEADannot_rc_shift11 (EREB145_ZmSHINE_B73_1_m1:EEAD0333:EEADannot_rc) 0.748 0.449 3.383 0.877 0.863 779 894 594 921 989 835.400
; assembly_13 versus EREB145_ZmSHINE_B73_1_m1_EEAD0333_EEADannot_rc (EREB145_ZmSHINE_B73_1_m1:EEAD0333:EEADannot_rc); m=209/229; ncol2=13; w=0; offset=2; strand=R; shift=11; score= 835.4; -----------GCGGCGGCG ; cor=0.748; Ncor=0.449; logoDP=3.383; NsEucl=0.877; NSW=0.863; rcor=779; rNcor=894; rlogoDP=594; rNsEucl=921; rNSW=989; rank_mean=835.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 2 0 1 3 0 4 6 2 c 0 0 0 0 0 0 0 0 0 0 0 0 90 0 1 83 0 3 87 1 g 0 0 0 0 0 0 0 0 0 0 0 92 1 99 96 0 100 92 1 96 t 0 0 0 0 0 0 0 0 0 0 0 2 7 1 2 14 0 1 6 1

EREB4_Mo17_1_EEAD0354_EEADannot_rc_shift11 (EREB4_Mo17_1:EEAD0354:EEADannot_rc) 0.759 0.402 0.304 0.892 0.895 718 1074 999 741 692 844.800
; assembly_13 versus EREB4_Mo17_1_EEAD0354_EEADannot_rc (EREB4_Mo17_1:EEAD0354:EEADannot_rc); m=210/229; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 844.8; -----------gyGkCGGyG ; cor=0.759; Ncor=0.402; logoDP=0.304; NsEucl=0.892; NSW=0.895; rcor=718; rNcor=1074; rlogoDP=999; rNsEucl=741; rNSW=692; rank_mean=844.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 20 11 2 12 1 1 2 5 0 c 0 0 0 0 0 0 0 0 0 0 0 12 50 0 1 93 0 0 42 0 g 0 0 0 0 0 0 0 0 0 0 0 57 2 98 59 1 99 97 0 100 t 0 0 0 0 0 0 0 0 0 0 0 11 37 0 28 5 0 1 53 0

CRF4_MA0976.3_JASPAR_rc_shift8 (CRF4:MA0976.3:JASPAR_rc) 0.706 0.529 2.790 0.877 0.863 1055 601 681 917 985 847.800
; assembly_13 versus CRF4_MA0976.3_JASPAR_rc (CRF4:MA0976.3:JASPAR_rc); m=211/229; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 847.8; --------GyGGCGGCGg-- ; cor=0.706; Ncor=0.529; logoDP=2.790; NsEucl=0.877; NSW=0.863; rcor=1055; rNcor=601; rlogoDP=681; rNsEucl=917; rNSW=985; rank_mean=847.800; match_rank= a 0 0 0 0 0 0 0 0 134 131 25 87 51 9 9 63 163 321 0 0 c 0 0 0 0 0 0 0 0 40 653 16 9 1734 15 22 1744 111 247 0 0 g 0 0 0 0 0 0 0 0 1659 12 1804 1794 2 1866 1865 4 1377 1167 0 0 t 0 0 0 0 0 0 0 0 67 1104 55 10 113 10 4 89 249 165 0 0

AT3G23230_M0024_1.02_CISBP_rc_shift10 (AT3G23230:M0024_1.02:CISBP_rc) 0.713 0.519 0.264 0.883 0.890 990 645 1031 856 754 855.200
; assembly_13 versus AT3G23230_M0024_1.02_CISBP_rc (AT3G23230:M0024_1.02:CISBP_rc); m=212/229; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 855.2; ----------GgCGGCks-- ; cor=0.713; Ncor=0.519; logoDP=0.264; NsEucl=0.883; NSW=0.890; rcor=990; rNcor=645; rlogoDP=1031; rNsEucl=856; rNSW=754; rank_mean=855.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 10 19 1 7 6 4 17 20 0 0 c 0 0 0 0 0 0 0 0 0 0 10 17 76 1 16 80 22 27 0 0 g 0 0 0 0 0 0 0 0 0 0 68 45 4 77 75 6 36 32 0 0 t 0 0 0 0 0 0 0 0 0 0 12 19 19 15 3 10 25 21 0 0

DEAR4_DEAR4_2_ArabidopsisPBM_rc_shift12 (DEAR4:DEAR4_2:ArabidopsisPBM_rc) 0.749 0.461 0.639 0.878 0.881 774 850 913 906 835 855.600
; assembly_13 versus DEAR4_DEAR4_2_ArabidopsisPBM_rc (DEAR4:DEAR4_2:ArabidopsisPBM_rc); m=213/229; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 855.6; ------------aGGCGGCG ; cor=0.749; Ncor=0.461; logoDP=0.639; NsEucl=0.878; NSW=0.881; rcor=774; rNcor=850; rlogoDP=913; rNsEucl=906; rNSW=835; rank_mean=855.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 61 9 7 3 1 0 1 2 c 0 0 0 0 0 0 0 0 0 0 0 0 15 2 9 95 1 8 87 2 g 0 0 0 0 0 0 0 0 0 0 0 0 20 86 83 1 98 91 0 94 t 0 0 0 0 0 0 0 0 0 0 0 0 4 3 1 1 0 1 12 2

CRF2_M0029_1.02_CISBP_rc_shift10 (CRF2:M0029_1.02:CISBP_rc) 0.742 0.540 0.267 0.872 0.870 805 570 1025 956 935 858.200
; assembly_13 versus CRF2_M0029_1.02_CISBP_rc (CRF2:M0029_1.02:CISBP_rc); m=214/229; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 858.2; ----------GGCGGCGs-- ; cor=0.742; Ncor=0.540; logoDP=0.267; NsEucl=0.872; NSW=0.870; rcor=805; rNcor=570; rlogoDP=1025; rNsEucl=956; rNSW=935; rank_mean=858.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 3 13 0 0 c 0 0 0 0 0 0 0 0 0 0 6 0 100 0 2 100 8 35 0 0 g 0 0 0 0 0 0 0 0 0 0 73 93 0 100 98 0 78 48 0 0 t 0 0 0 0 0 0 0 0 0 0 12 2 0 0 0 0 11 4 0 0

ERF098_MA0999.1_JASPAR_rc_shift10 (ERF098:MA0999.1:JASPAR_rc) 0.712 0.518 0.266 0.883 0.890 1000 653 1026 860 756 859.000
; assembly_13 versus ERF098_MA0999.1_JASPAR_rc (ERF098:MA0999.1:JASPAR_rc); m=215/229; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 859; ----------ggCGGCgs-- ; cor=0.712; Ncor=0.518; logoDP=0.266; NsEucl=0.883; NSW=0.890; rcor=1000; rNcor=653; rlogoDP=1026; rNsEucl=860; rNSW=756; rank_mean=859.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 98 192 13 70 62 37 173 198 0 0 c 0 0 0 0 0 0 0 0 0 0 99 170 756 10 166 804 222 270 0 0 g 0 0 0 0 0 0 0 0 0 0 677 448 39 769 746 63 356 317 0 0 t 0 0 0 0 0 0 0 0 0 0 125 190 192 151 26 96 248 215 0 0

CRF2_MA0975.1_JASPAR_rc_shift10 (CRF2:MA0975.1:JASPAR_rc) 0.741 0.539 0.270 0.872 0.869 810 573 1023 961 944 862.200
; assembly_13 versus CRF2_MA0975.1_JASPAR_rc (CRF2:MA0975.1:JASPAR_rc); m=216/229; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 862.2; ----------GGCGGCGs-- ; cor=0.741; Ncor=0.539; logoDP=0.270; NsEucl=0.872; NSW=0.869; rcor=810; rNcor=573; rlogoDP=1023; rNsEucl=961; rNSW=944; rank_mean=862.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 88 46 0 0 0 0 27 131 0 0 c 0 0 0 0 0 0 0 0 0 0 59 0 999 0 23 999 81 348 0 0 g 0 0 0 0 0 0 0 0 0 0 735 931 0 999 977 0 783 478 0 0 t 0 0 0 0 0 0 0 0 0 0 118 23 0 0 0 0 108 44 0 0

CRF4_M0033_1.02_CISBP_rc_shift10 (CRF4:M0033_1.02:CISBP_rc) 0.733 0.533 0.312 0.872 0.870 864 590 996 955 934 867.800
; assembly_13 versus CRF4_M0033_1.02_CISBP_rc (CRF4:M0033_1.02:CISBP_rc); m=217/229; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 867.8; ----------GGCGGCGs-- ; cor=0.733; Ncor=0.533; logoDP=0.312; NsEucl=0.872; NSW=0.870; rcor=864; rNcor=590; rlogoDP=996; rNsEucl=955; rNSW=934; rank_mean=867.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 6 7 0 0 c 0 0 0 0 0 0 0 0 0 0 6 6 99 0 3 100 6 53 0 0 g 0 0 0 0 0 0 0 0 0 0 79 76 1 100 97 0 77 33 0 0 t 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 11 7 0 0

CRF4_MA0976.1_JASPAR_rc_shift10 (CRF4:MA0976.1:JASPAR_rc) 0.732 0.533 0.313 0.872 0.869 872 594 995 958 938 871.400
; assembly_13 versus CRF4_MA0976.1_JASPAR_rc (CRF4:MA0976.1:JASPAR_rc); m=218/229; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 871.4; ----------GGCGGCGs-- ; cor=0.732; Ncor=0.533; logoDP=0.313; NsEucl=0.872; NSW=0.869; rcor=872; rNcor=594; rlogoDP=995; rNsEucl=958; rNSW=938; rank_mean=871.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 49 108 0 0 0 0 62 70 0 0 c 0 0 0 0 0 0 0 0 0 0 65 68 987 0 25 1000 62 535 0 0 g 0 0 0 0 0 0 0 0 0 0 790 756 13 1000 974 0 769 326 0 0 t 0 0 0 0 0 0 0 0 0 0 97 68 0 0 0 0 108 70 0 0

DREB2G_MA1226.2_JASPAR_shift4 (DREB2G:MA1226.2:JASPAR) 0.712 0.400 4.667 0.879 0.868 1006 1087 432 900 949 874.800
; assembly_13 versus DREB2G_MA1226.2_JASPAR (DREB2G:MA1226.2:JASPAR); m=219/229; ncol2=14; w=-5; offset=-5; strand=D; shift=4; score= 874.8; ----ggyggarGCGGYGG-- ; cor=0.712; Ncor=0.400; logoDP=4.667; NsEucl=0.879; NSW=0.868; rcor=1006; rNcor=1087; rlogoDP=432; rNsEucl=900; rNSW=949; rank_mean=874.800; match_rank= a 0 0 0 0 95 88 137 84 98 304 185 34 21 0 0 25 0 54 0 0 c 0 0 0 0 41 54 179 49 42 133 0 0 509 0 0 156 0 38 0 0 g 0 0 0 0 357 371 58 312 386 12 395 531 0 587 587 0 584 491 0 0 t 0 0 0 0 94 74 213 142 61 138 7 22 57 0 0 406 3 4 0 0

EREB145_ZmSHINE_Mo17_1_EEAD0334_EEADannot_rc_shift11 (EREB145_ZmSHINE_Mo17_1:EEAD0334:EEADannot_rc) 0.769 0.407 0.339 0.885 0.881 672 1050 980 836 836 874.800
; assembly_13 versus EREB145_ZmSHINE_Mo17_1_EEAD0334_EEADannot_rc (EREB145_ZmSHINE_Mo17_1:EEAD0334:EEADannot_rc); m=220/229; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 874.8; -----------GCGGCGGCG ; cor=0.769; Ncor=0.407; logoDP=0.339; NsEucl=0.885; NSW=0.881; rcor=672; rNcor=1050; rlogoDP=980; rNsEucl=836; rNSW=836; rank_mean=874.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 12 6 1 4 2 0 3 5 0 c 0 0 0 0 0 0 0 0 0 0 0 2 83 0 0 86 1 2 83 1 g 0 0 0 0 0 0 0 0 0 0 0 80 4 98 94 0 99 93 3 98 t 0 0 0 0 0 0 0 0 0 0 0 6 7 1 2 12 0 2 9 1

ORA47_ORA47_2_ArabidopsisPBM_rc_shift12 (ORA47:ORA47_2:ArabidopsisPBM_rc) 0.741 0.456 0.538 0.876 0.877 807 867 938 930 866 881.600
; assembly_13 versus ORA47_ORA47_2_ArabidopsisPBM_rc (ORA47:ORA47_2:ArabidopsisPBM_rc); m=221/229; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 881.6; ------------rGkCGGCG ; cor=0.741; Ncor=0.456; logoDP=0.538; NsEucl=0.876; NSW=0.877; rcor=807; rNcor=867; rlogoDP=938; rNsEucl=930; rNSW=866; rank_mean=881.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 42 2 5 1 0 0 0 4 c 0 0 0 0 0 0 0 0 0 0 0 0 12 1 5 98 1 3 92 2 g 0 0 0 0 0 0 0 0 0 0 0 0 25 93 65 0 98 97 1 93 t 0 0 0 0 0 0 0 0 0 0 0 0 21 4 25 1 1 0 7 1

RAP2.2_M0021_1.02_CISBP_rc_shift13 (RAP2.2:M0021_1.02:CISBP_rc) 0.721 0.420 0.094 0.886 0.908 942 1004 1082 832 548 881.600
; assembly_13 versus RAP2.2_M0021_1.02_CISBP_rc (RAP2.2:M0021_1.02:CISBP_rc); m=222/229; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 881.6; -------------gsCrscm ; cor=0.721; Ncor=0.420; logoDP=0.094; NsEucl=0.886; NSW=0.908; rcor=942; rNcor=1004; rlogoDP=1082; rNsEucl=832; rNSW=548; rank_mean=881.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 19 24 1 33 14 13 28 c 0 0 0 0 0 0 0 0 0 0 0 0 0 23 28 78 0 25 58 26 g 0 0 0 0 0 0 0 0 0 0 0 0 0 35 33 0 66 50 7 22 t 0 0 0 0 0 0 0 0 0 0 0 0 0 23 15 21 1 11 22 24

RAP2.3_RAP2.3_ArabidopsisPBM_rc_shift12 (RAP2.3:RAP2.3:ArabidopsisPBM_rc) 0.726 0.447 0.400 0.880 0.885 901 905 961 892 799 891.600
; assembly_13 versus RAP2.3_RAP2.3_ArabidopsisPBM_rc (RAP2.3:RAP2.3:ArabidopsisPBM_rc); m=223/229; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 891.6; ------------wkGCGGCG ; cor=0.726; Ncor=0.447; logoDP=0.400; NsEucl=0.880; NSW=0.885; rcor=901; rNcor=905; rlogoDP=961; rNsEucl=892; rNSW=799; rank_mean=891.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 25 7 8 1 0 0 0 6 c 0 0 0 0 0 0 0 0 0 0 0 0 17 1 3 98 0 24 98 3 g 0 0 0 0 0 0 0 0 0 0 0 0 9 66 78 0 98 75 1 76 t 0 0 0 0 0 0 0 0 0 0 0 0 49 26 11 1 2 1 1 15

MYB1_MA1179.2_JASPAR_rc_shift9 (MYB1:MA1179.2:JASPAR_rc) 0.740 0.471 0.202 0.867 0.876 814 824 1058 985 886 913.400
; assembly_13 versus MYB1_MA1179.2_JASPAR_rc (MYB1:MA1179.2:JASPAR_rc); m=224/229; ncol2=7; w=0; offset=0; strand=R; shift=9; score= 913.4; ---------wAACsGt---- ; cor=0.740; Ncor=0.471; logoDP=0.202; NsEucl=0.867; NSW=0.876; rcor=814; rNcor=824; rlogoDP=1058; rNsEucl=985; rNSW=886; rank_mean=913.400; match_rank= a 0 0 0 0 0 0 0 0 0 39 144 144 0 0 0 16 0 0 0 0 c 0 0 0 0 0 0 0 0 0 8 0 0 144 52 0 32 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 89 144 1 0 0 0 0 t 0 0 0 0 0 0 0 0 0 97 0 0 0 3 0 95 0 0 0 0

LBD16_RA2_Mo17_1_EEAD0420_EEADannot_rc_shift10 (LBD16_RA2_Mo17_1:EEAD0420:EEADannot_rc) 0.702 0.439 3.255 0.876 0.847 1080 930 614 926 1048 919.600
; assembly_13 versus LBD16_RA2_Mo17_1_EEAD0420_EEADannot_rc (LBD16_RA2_Mo17_1:EEAD0420:EEADannot_rc); m=225/229; ncol2=15; w=0; offset=1; strand=R; shift=10; score= 919.6; ----------GGCGGCGGCG ; cor=0.702; Ncor=0.439; logoDP=3.255; NsEucl=0.876; NSW=0.847; rcor=1080; rNcor=930; rlogoDP=614; rNsEucl=926; rNSW=1048; rank_mean=919.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 6 1 2 1 3 9 2 0 8 0 c 0 0 0 0 0 0 0 0 0 0 6 9 98 1 14 86 0 2 87 1 g 0 0 0 0 0 0 0 0 0 0 84 90 0 96 81 3 97 98 3 97 t 0 0 0 0 0 0 0 0 0 0 4 0 0 2 2 2 1 0 2 2

RRTF1_RRTF1_ArabidopsisPBM_rc_shift12 (RRTF1:RRTF1:ArabidopsisPBM_rc) 0.730 0.449 0.639 0.871 0.868 878 891 912 967 952 920.000
; assembly_13 versus RRTF1_RRTF1_ArabidopsisPBM_rc (RRTF1:RRTF1:ArabidopsisPBM_rc); m=226/229; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 920; ------------TGGCGGCG ; cor=0.730; Ncor=0.449; logoDP=0.639; NsEucl=0.871; NSW=0.868; rcor=878; rNcor=891; rlogoDP=912; rNsEucl=967; rNSW=952; rank_mean=920.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 8 2 9 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 21 0 1 99 1 17 99 1 g 0 0 0 0 0 0 0 0 0 0 0 0 2 77 86 1 98 83 1 94 t 0 0 0 0 0 0 0 0 0 0 0 0 69 21 4 0 1 0 0 5

CRF4_MA0976.2_JASPAR_rc_shift6 (CRF4:MA0976.2:JASPAR_rc) 0.706 0.454 1.637 0.877 0.863 1055 878 778 917 985 922.600
; assembly_13 versus CRF4_MA0976.2_JASPAR_rc (CRF4:MA0976.2:JASPAR_rc); m=227/229; ncol2=12; w=-3; offset=-3; strand=R; shift=6; score= 922.6; ------ygGyGGCGGCGg-- ; cor=0.706; Ncor=0.454; logoDP=1.637; NsEucl=0.877; NSW=0.863; rcor=1055; rNcor=878; rlogoDP=778; rNsEucl=917; rNSW=985; rank_mean=922.600; match_rank= a 0 0 0 0 0 0 363 369 134 131 25 87 51 9 9 63 163 321 0 0 c 0 0 0 0 0 0 757 198 40 653 16 9 1734 15 22 1744 111 247 0 0 g 0 0 0 0 0 0 168 1002 1659 12 1804 1794 2 1866 1865 4 1377 1167 0 0 t 0 0 0 0 0 0 612 331 67 1104 55 10 113 10 4 89 249 165 0 0

NAC035_MA2046.2_JASPAR_shift10 (NAC035:MA2046.2:JASPAR) 0.700 0.446 3.644 0.852 0.847 1087 909 565 1054 1049 932.800
; assembly_13 versus NAC035_MA2046.2_JASPAR (NAC035:MA2046.2:JASPAR); m=228/229; ncol2=7; w=0; offset=1; strand=D; shift=10; score= 932.8; ----------CACGGCA--- ; cor=0.700; Ncor=0.446; logoDP=3.644; NsEucl=0.852; NSW=0.847; rcor=1087; rNcor=909; rlogoDP=565; rNsEucl=1054; rNSW=1049; rank_mean=932.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 41 800 43 10 41 45 755 0 0 0 c 0 0 0 0 0 0 0 0 0 0 632 4 736 8 29 720 4 0 0 0 g 0 0 0 0 0 0 0 0 0 0 36 3 24 787 649 7 29 0 0 0 t 0 0 0 0 0 0 0 0 0 0 104 6 10 8 94 41 25 0 0 0

ERF012_MA1248.2_JASPAR_rc_shift13 (ERF012:MA1248.2:JASPAR_rc) 0.762 0.445 0.194 0.862 0.866 709 912 1063 1021 962 933.400
; assembly_13 versus ERF012_MA1248.2_JASPAR_rc (ERF012:MA1248.2:JASPAR_rc); m=229/229; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 933.4; -------------GkCGGTG ; cor=0.762; Ncor=0.445; logoDP=0.194; NsEucl=0.862; NSW=0.866; rcor=709; rNcor=912; rlogoDP=1063; rNsEucl=1021; rNSW=962; rank_mean=933.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 10 98 0 0 0 2 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 563 0 0 36 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 558 171 1 567 568 0 568 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 299 4 1 0 530 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	Aligned matrices
assembly_13_shift9 (assembly_13)												; assembly_13; m=0 (reference); ncol1=11; shift=9; ncol=20; ---------hrACGGCGGhd ; Alignment reference a 0 0 0 0 0 0 0 0 0 149 169 362 20 11 32 20 21 29 134 108 c 0 0 0 0 0 0 0 0 0 109 66 18 354 12 15 360 7 12 112 67 g 0 0 0 0 0 0 0 0 0 52 108 31 10 387 357 5 384 349 66 134 t 0 0 0 0 0 0 0 0 0 112 79 11 38 12 18 37 10 32 110 113
ERF8_MA0994.3_JASPAR_shift9 (ERF8:MA0994.3:JASPAR)	0.866	0.866	5.091	0.926	0.940	202	4	367	154	191	183.600	; assembly_13 versus ERF8_MA0994.3_JASPAR (ERF8:MA0994.3:JASPAR); m=1/229; ncol2=11; w=0; offset=0; strand=D; shift=9; score= 183.6; ---------tgrCGGCGGCG ; cor=0.866; Ncor=0.866; logoDP=5.091; NsEucl=0.926; NSW=0.940; rcor=202; rNcor=4; rlogoDP=367; rNsEucl=154; rNSW=191; rank_mean=183.600; match_rank= a 0 0 0 0 0 0 0 0 0 116 103 426 32 3 16 11 6 16 108 21 c 0 0 0 0 0 0 0 0 0 180 50 29 649 3 9 701 2 46 537 9 g 0 0 0 0 0 0 0 0 0 33 491 252 5 728 714 0 728 667 11 674 t 0 0 0 0 0 0 0 0 0 414 99 36 57 9 4 31 7 14 87 39
ERF087_MA1247.2_JASPAR_shift10 (ERF087:MA1247.2:JASPAR)	0.866	0.787	5.750	0.919	0.935	201	24	260	236	239	192.000	; assembly_13 versus ERF087_MA1247.2_JASPAR (ERF087:MA1247.2:JASPAR); m=2/229; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 192; ----------grCGGCGGmG ; cor=0.866; Ncor=0.787; logoDP=5.750; NsEucl=0.919; NSW=0.935; rcor=201; rNcor=24; rlogoDP=260; rNsEucl=236; rNSW=239; rank_mean=192.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 97 212 8 0 6 0 0 15 200 42 c 0 0 0 0 0 0 0 0 0 0 38 11 577 0 1 586 0 55 314 15 g 0 0 0 0 0 0 0 0 0 0 374 366 0 595 586 0 594 511 11 485 t 0 0 0 0 0 0 0 0 0 0 86 6 10 0 2 9 1 14 70 53
JUB1_MA2017.1_JASPAR_shift8 (JUB1:MA2017.1:JASPAR)	0.858	0.674	4.820	0.932	0.949	232	143	418	117	134	208.800	; assembly_13 versus JUB1_MA2017.1_JASPAR (JUB1:MA2017.1:JASPAR); m=3/229; ncol2=14; w=-1; offset=-1; strand=D; shift=8; score= 208.8; --------dycACGGCGagt ; cor=0.858; Ncor=0.674; logoDP=4.820; NsEucl=0.932; NSW=0.949; rcor=232; rNcor=143; rlogoDP=418; rNsEucl=117; rNSW=134; rank_mean=208.800; match_rank= a 0 0 0 0 0 0 0 0 151 113 96 458 9 9 3 12 33 288 68 67 c 0 0 0 0 0 0 0 0 79 153 236 30 492 8 12 476 10 36 122 47 g 0 0 0 0 0 0 0 0 132 65 115 10 0 489 492 0 457 82 196 121 t 0 0 0 0 0 0 0 0 147 178 62 11 8 3 2 21 9 103 123 274
AT1G28160_MA1247.1_JASPAR_shift9 (AT1G28160:MA1247.1:JASPAR)	0.862	0.632	5.753	0.925	0.939	218	234	259	163	203	215.400	; assembly_13 versus AT1G28160_MA1247.1_JASPAR (AT1G28160:MA1247.1:JASPAR); m=4/229; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 215.4; ---------ygrCGGCGGmG ; cor=0.862; Ncor=0.632; logoDP=5.753; NsEucl=0.925; NSW=0.939; rcor=218; rNcor=234; rlogoDP=259; rNsEucl=163; rNSW=203; rank_mean=215.400; match_rank= a 0 0 0 0 0 0 0 0 0 129 97 212 8 0 6 0 0 15 200 42 c 0 0 0 0 0 0 0 0 0 178 38 11 577 0 1 586 0 55 314 15 g 0 0 0 0 0 0 0 0 0 28 374 366 0 595 586 0 594 511 11 485 t 0 0 0 0 0 0 0 0 0 260 86 6 10 0 2 9 1 14 70 53
RRTF1.DAP_M0057_AthalianaCistrome_shift5 (RRTF1.DAP:M0057:AthalianaCistrome)	0.856	0.628	5.366	0.928	0.942	237	256	317	138	172	224.000	; assembly_13 versus RRTF1.DAP_M0057_AthalianaCistrome (RRTF1.DAP:M0057:AthalianaCistrome); m=5/229; ncol2=15; w=-4; offset=-4; strand=D; shift=5; score= 224; -----raaatkrCGGCGsmg ; cor=0.856; Ncor=0.628; logoDP=5.366; NsEucl=0.928; NSW=0.942; rcor=237; rNcor=256; rlogoDP=317; rNsEucl=138; rNSW=172; rank_mean=224.000; match_rank= a 0 0 0 0 0 185 252 277 386 147 105 219 1 0 0 1 1 22 172 85 c 0 0 0 0 0 99 109 49 6 42 5 31 595 0 0 599 1 166 312 42 g 0 0 0 0 0 233 100 132 101 5 236 315 0 598 600 0 565 389 39 390 t 0 0 0 0 0 83 139 142 107 406 254 35 4 2 0 0 33 23 77 83
ERF3.DAP_M0069_AthalianaCistrome_shift9 (ERF3.DAP:M0069:AthalianaCistrome)	0.859	0.630	5.322	0.926	0.939	224	243	327	158	196	229.600	; assembly_13 versus ERF3.DAP_M0069_AthalianaCistrome (ERF3.DAP:M0069:AthalianaCistrome); m=6/229; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 229.6; ---------ygrCGGCGGmG ; cor=0.859; Ncor=0.630; logoDP=5.322; NsEucl=0.926; NSW=0.939; rcor=224; rNcor=243; rlogoDP=327; rNsEucl=158; rNSW=196; rank_mean=229.600; match_rank= a 0 0 0 0 0 0 0 0 0 125 104 238 8 0 4 0 1 27 185 35 c 0 0 0 0 0 0 0 0 0 150 17 2 569 0 9 560 0 60 333 18 g 0 0 0 0 0 0 0 0 0 15 370 346 0 596 582 0 568 503 9 502 t 0 0 0 0 0 0 0 0 0 306 105 10 19 0 1 36 27 6 69 41
RAP26_MA1221.1_JASPAR_shift9 (RAP26:MA1221.1:JASPAR)	0.850	0.624	5.387	0.924	0.937	259	270	312	172	218	246.200	; assembly_13 versus RAP26_MA1221.1_JASPAR (RAP26:MA1221.1:JASPAR); m=7/229; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 246.2; ---------tkrCGGCGGmG ; cor=0.850; Ncor=0.624; logoDP=5.387; NsEucl=0.924; NSW=0.937; rcor=259; rNcor=270; rlogoDP=312; rNsEucl=172; rNSW=218; rank_mean=246.200; match_rank= a 0 0 0 0 0 0 0 0 0 103 64 187 1 0 1 8 0 15 197 67 c 0 0 0 0 0 0 0 0 0 139 22 11 574 0 15 567 3 60 310 9 g 0 0 0 0 0 0 0 0 0 18 326 381 0 597 581 0 579 511 14 454 t 0 0 0 0 0 0 0 0 0 337 185 18 22 0 0 22 15 11 76 67
ESE3.ampDAP_M0061_AthalianaCistrome_shift8 (ESE3.ampDAP:M0061:AthalianaCistrome)	0.848	0.622	5.160	0.926	0.939	271	274	355	157	195	250.400	; assembly_13 versus ESE3.ampDAP_M0061_AthalianaCistrome (ESE3.ampDAP:M0061:AthalianaCistrome); m=8/229; ncol2=15; w=-1; offset=-1; strand=D; shift=8; score= 250.4; --------kygrCGGCGGmG ; cor=0.848; Ncor=0.622; logoDP=5.160; NsEucl=0.926; NSW=0.939; rcor=271; rNcor=274; rlogoDP=355; rNsEucl=157; rNSW=195; rank_mean=250.400; match_rank= a 0 0 0 0 0 0 0 0 132 133 135 156 0 0 3 5 0 9 250 65 c 0 0 0 0 0 0 0 0 35 158 14 25 583 0 2 455 0 63 251 11 g 0 0 0 0 0 0 0 0 276 38 320 366 0 597 595 0 593 517 8 485 t 0 0 0 0 0 0 0 0 157 271 131 53 17 3 0 140 7 11 91 39
ABR1_MA1244.2_JASPAR_shift8 (ABR1:MA1244.2:JASPAR)	0.828	0.759	5.096	0.921	0.931	353	37	364	217	284	251.000	; assembly_13 versus ABR1_MA1244.2_JASPAR (ABR1:MA1244.2:JASPAR); m=9/229; ncol2=12; w=-1; offset=-1; strand=D; shift=8; score= 251; --------rtkrCGGCGGmG ; cor=0.828; Ncor=0.759; logoDP=5.096; NsEucl=0.921; NSW=0.931; rcor=353; rNcor=37; rlogoDP=364; rNsEucl=217; rNSW=284; rank_mean=251.000; match_rank= a 0 0 0 0 0 0 0 0 253 103 59 150 2 0 0 4 5 33 196 66 c 0 0 0 0 0 0 0 0 18 97 15 27 590 0 12 584 10 105 298 36 g 0 0 0 0 0 0 0 0 193 14 308 401 0 598 588 0 550 445 30 421 t 0 0 0 0 0 0 0 0 136 386 218 22 8 2 0 12 35 17 76 77
ERF122_MA1261.2_JASPAR_shift10 (ERF122:MA1261.2:JASPAR)	0.835	0.759	4.141	0.922	0.939	327	40	500	198	197	252.400	; assembly_13 versus ERF122_MA1261.2_JASPAR (ERF122:MA1261.2:JASPAR); m=10/229; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 252.4; ----------yrCGGCkGhk ; cor=0.835; Ncor=0.759; logoDP=4.141; NsEucl=0.922; NSW=0.939; rcor=327; rNcor=40; rlogoDP=500; rNsEucl=198; rNSW=197; rank_mean=252.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 10 55 0 0 0 0 0 25 41 0 c 0 0 0 0 0 0 0 0 0 0 35 0 120 0 0 106 3 0 53 10 g 0 0 0 0 0 0 0 0 0 0 16 80 0 136 138 0 89 106 9 91 t 0 0 0 0 0 0 0 0 0 0 77 3 18 2 0 32 46 7 35 37
ERF086_MA1252.2_JASPAR_rc_shift11 (ERF086:MA1252.2:JASPAR_rc)	0.894	0.670	2.968	0.922	0.945	127	148	644	199	149	253.400	; assembly_13 versus ERF086_MA1252.2_JASPAR_rc (ERF086:MA1252.2:JASPAR_rc); m=11/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 253.4; -----------rCGGCGGmG ; cor=0.894; Ncor=0.670; logoDP=2.968; NsEucl=0.922; NSW=0.945; rcor=127; rNcor=148; rlogoDP=644; rNsEucl=199; rNSW=149; rank_mean=253.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 199 6 0 9 1 0 20 163 42 c 0 0 0 0 0 0 0 0 0 0 0 11 459 0 1 469 0 61 256 0 g 0 0 0 0 0 0 0 0 0 0 0 260 0 475 466 0 477 397 0 397 t 0 0 0 0 0 0 0 0 0 0 0 8 13 3 2 8 1 0 59 39
ERF11_MA1001.2_JASPAR_rc_shift7 (ERF11:MA1001.2:JASPAR_rc)	0.879	0.676	2.715	0.926	0.945	157	139	693	151	148	257.600	; assembly_13 versus ERF11_MA1001.2_JASPAR_rc (ERF11:MA1001.2:JASPAR_rc); m=12/229; ncol2=12; w=-2; offset=-2; strand=R; shift=7; score= 257.6; -------ddTGRCGGCGgm- ; cor=0.879; Ncor=0.676; logoDP=2.715; NsEucl=0.926; NSW=0.945; rcor=157; rNcor=139; rlogoDP=693; rNsEucl=151; rNSW=148; rank_mean=257.600; match_rank= a 0 0 0 0 0 0 0 356 414 120 96 894 12 2 19 31 10 198 377 0 c 0 0 0 0 0 0 0 160 136 134 40 22 1252 2 23 1218 8 203 455 0 g 0 0 0 0 0 0 0 391 407 28 1081 331 0 1269 1230 1 1243 728 136 0 t 0 0 0 0 0 0 0 373 323 998 63 33 16 7 8 30 19 151 312 0
PUCHI_MA1252.1_JASPAR_rc_shift9 (PUCHI:MA1252.1:JASPAR_rc)	0.886	0.650	1.626	0.933	0.951	142	193	780	112	127	270.800	; assembly_13 versus PUCHI_MA1252.1_JASPAR_rc (PUCHI:MA1252.1:JASPAR_rc); m=13/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 270.8; ---------hrrCGGCGGmG ; cor=0.886; Ncor=0.650; logoDP=1.626; NsEucl=0.933; NSW=0.951; rcor=142; rNcor=193; rlogoDP=780; rNsEucl=112; rNSW=127; rank_mean=270.800; match_rank= a 0 0 0 0 0 0 0 0 0 124 126 199 6 0 9 1 0 20 163 42 c 0 0 0 0 0 0 0 0 0 123 34 11 459 0 1 469 0 61 256 0 g 0 0 0 0 0 0 0 0 0 37 214 260 0 475 466 0 477 397 0 397 t 0 0 0 0 0 0 0 0 0 194 104 8 13 3 2 8 1 0 59 39
LEP_MA1246.2_JASPAR_rc_shift10 (LEP:MA1246.2:JASPAR_rc)	0.858	0.780	2.771	0.920	0.936	230	27	685	230	229	280.200	; assembly_13 versus LEP_MA1246.2_JASPAR_rc (LEP:MA1246.2:JASPAR_rc); m=14/229; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 280.2; ----------grCGGCGGmG ; cor=0.858; Ncor=0.780; logoDP=2.771; NsEucl=0.920; NSW=0.936; rcor=230; rNcor=27; rlogoDP=685; rNsEucl=230; rNSW=229; rank_mean=280.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 90 157 7 1 10 8 0 36 172 32 c 0 0 0 0 0 0 0 0 0 0 22 20 460 0 0 456 0 52 226 9 g 0 0 0 0 0 0 0 0 0 0 303 301 0 489 480 0 488 398 23 413 t 0 0 0 0 0 0 0 0 0 0 75 12 23 0 0 26 2 4 69 36
Zm00001d052229_MA1818.1_JASPAR_rc_shift10 (Zm00001d052229:MA1818.1:JASPAR_rc)	0.850	0.772	3.807	0.916	0.930	261	31	545	275	301	282.600	; assembly_13 versus Zm00001d052229_MA1818.1_JASPAR_rc (Zm00001d052229:MA1818.1:JASPAR_rc); m=15/229; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 282.6; ----------ggCGGCGGcg ; cor=0.850; Ncor=0.772; logoDP=3.807; NsEucl=0.916; NSW=0.930; rcor=261; rNcor=31; rlogoDP=545; rNsEucl=275; rNSW=301; rank_mean=282.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 986 1210 0 0 0 0 0 0 969 1151 c 0 0 0 0 0 0 0 0 0 0 1908 1720 8956 0 0 8956 0 0 5207 2029 g 0 0 0 0 0 0 0 0 0 0 5142 5049 0 8956 8956 0 8956 8956 1587 4801 t 0 0 0 0 0 0 0 0 0 0 920 977 0 0 0 0 0 0 1193 975
AT5G67000_MA1261.1_JASPAR_shift6 (AT5G67000:MA1261.1:JASPAR)	0.833	0.611	4.143	0.928	0.944	336	303	499	133	161	286.400	; assembly_13 versus AT5G67000_MA1261.1_JASPAR (AT5G67000:MA1261.1:JASPAR); m=16/229; ncol2=15; w=-3; offset=-3; strand=D; shift=6; score= 286.4; ------ykdwyrCGGCkGhk ; cor=0.833; Ncor=0.611; logoDP=4.143; NsEucl=0.928; NSW=0.944; rcor=336; rNcor=303; rlogoDP=499; rNsEucl=133; rNSW=161; rank_mean=286.400; match_rank= a 0 0 0 0 0 0 34 26 39 40 10 55 0 0 0 0 0 25 41 0 c 0 0 0 0 0 0 47 20 7 30 35 0 120 0 0 106 3 0 53 10 g 0 0 0 0 0 0 15 42 57 14 16 80 0 136 138 0 89 106 9 91 t 0 0 0 0 0 0 42 50 35 54 77 3 18 2 0 32 46 7 35 37
ERF4_MA0992.2_JASPAR_rc_shift7 (ERF4:MA0992.2:JASPAR_rc)	0.866	0.666	2.826	0.921	0.938	205	163	674	209	208	291.800	; assembly_13 versus ERF4_MA0992.2_JASPAR_rc (ERF4:MA0992.2:JASPAR_rc); m=17/229; ncol2=12; w=-2; offset=-2; strand=R; shift=7; score= 291.8; -------drTGrCGGCGgm- ; cor=0.866; Ncor=0.666; logoDP=2.826; NsEucl=0.921; NSW=0.938; rcor=205; rNcor=163; rlogoDP=674; rNsEucl=209; rNSW=208; rank_mean=291.800; match_rank= a 0 0 0 0 0 0 0 305 363 86 56 627 8 1 17 19 5 126 319 0 c 0 0 0 0 0 0 0 113 101 91 25 13 1006 2 9 979 2 165 368 0 g 0 0 0 0 0 0 0 287 306 19 900 349 0 1015 992 1 1005 644 109 0 t 0 0 0 0 0 0 0 318 253 827 42 34 9 5 5 24 11 88 227 0
LBD13_MA2021.1_JASPAR_rc_shift8 (LBD13:MA2021.1:JASPAR_rc)	0.833	0.705	2.761	0.926	0.940	337	103	686	148	185	291.800	; assembly_13 versus LBD13_MA2021.1_JASPAR_rc (LBD13:MA2021.1:JASPAR_rc); m=18/229; ncol2=13; w=-1; offset=-1; strand=R; shift=8; score= 291.8; --------dhkaCGGTGGag ; cor=0.833; Ncor=0.705; logoDP=2.761; NsEucl=0.926; NSW=0.940; rcor=337; rNcor=103; rlogoDP=686; rNsEucl=148; rNSW=185; rank_mean=291.800; match_rank= a 0 0 0 0 0 0 0 0 267 329 221 628 18 8 9 72 17 39 635 198 c 0 0 0 0 0 0 0 0 148 306 112 143 980 16 8 168 4 20 145 116 g 0 0 0 0 0 0 0 0 370 125 369 227 11 1021 1031 6 1018 979 44 494 t 0 0 0 0 0 0 0 0 270 295 353 57 46 10 7 809 16 17 231 247
ERF115.ampDAP_M0030_AthalianaCistrome_shift5 (ERF115.ampDAP:M0030:AthalianaCistrome)	0.832	0.610	5.041	0.922	0.933	339	307	383	197	257	296.600	; assembly_13 versus ERF115.ampDAP_M0030_AthalianaCistrome (ERF115.ampDAP:M0030:AthalianaCistrome); m=19/229; ncol2=15; w=-4; offset=-4; strand=D; shift=5; score= 296.6; -----gmrrykrCGGCGGmg ; cor=0.832; Ncor=0.610; logoDP=5.041; NsEucl=0.922; NSW=0.933; rcor=339; rNcor=307; rlogoDP=383; rNsEucl=197; rNSW=257; rank_mean=296.600; match_rank= a 0 0 0 0 0 137 170 197 281 82 59 176 0 0 0 3 8 45 191 74 c 0 0 0 0 0 60 251 41 10 157 3 9 593 0 0 586 5 117 303 26 g 0 0 0 0 0 339 39 221 223 9 337 397 0 588 598 0 521 422 25 405 t 0 0 0 0 0 62 138 139 84 350 199 16 5 10 0 9 64 14 79 93
JUB1_MA2017.2_JASPAR_shift11 (JUB1:MA2017.2:JASPAR)	0.898	0.572	4.815	0.911	0.945	116	457	421	355	152	300.200	; assembly_13 versus JUB1_MA2017.2_JASPAR (JUB1:MA2017.2:JASPAR); m=20/229; ncol2=7; w=0; offset=2; strand=D; shift=11; score= 300.2; -----------ACGGCGa-- ; cor=0.898; Ncor=0.572; logoDP=4.815; NsEucl=0.911; NSW=0.945; rcor=116; rNcor=457; rlogoDP=421; rNsEucl=355; rNSW=152; rank_mean=300.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 458 9 9 3 12 33 288 0 0 c 0 0 0 0 0 0 0 0 0 0 0 30 492 8 12 476 10 36 0 0 g 0 0 0 0 0 0 0 0 0 0 0 10 0 489 492 0 457 82 0 0 t 0 0 0 0 0 0 0 0 0 0 0 11 8 3 2 21 9 103 0 0
ERF8_MA0994.2_JASPAR_shift6 (ERF8:MA0994.2:JASPAR)	0.866	0.529	5.091	0.926	0.940	202	602	367	154	191	303.200	; assembly_13 versus ERF8_MA0994.2_JASPAR (ERF8:MA0994.2:JASPAR); m=21/229; ncol2=18; w=-3; offset=-3; strand=D; shift=6; score= 303.2; ------hrrtgrCGGCGGCG ; cor=0.866; Ncor=0.529; logoDP=5.091; NsEucl=0.926; NSW=0.940; rcor=202; rNcor=602; rlogoDP=367; rNsEucl=154; rNSW=191; rank_mean=303.200; match_rank= a 0 0 0 0 0 0 195 198 249 116 103 426 32 3 16 11 6 16 108 21 c 0 0 0 0 0 0 222 79 91 180 50 29 649 3 9 701 2 46 537 9 g 0 0 0 0 0 0 125 286 273 33 491 252 5 728 714 0 728 667 11 674 t 0 0 0 0 0 0 201 180 130 414 99 36 57 9 4 31 7 14 87 39
AT3G11100_UN0353.1_JASPAR_shift9 (AT3G11100:UN0353.1:JASPAR)	0.802	0.735	4.470	0.920	0.930	493	59	452	221	291	303.200	; assembly_13 versus AT3G11100_UN0353.1_JASPAR (AT3G11100:UN0353.1:JASPAR); m=22/229; ncol2=12; w=0; offset=0; strand=D; shift=9; score= 303.2; ---------ygmCGGCGAsr ; cor=0.802; Ncor=0.735; logoDP=4.470; NsEucl=0.920; NSW=0.930; rcor=493; rNcor=59; rlogoDP=452; rNsEucl=221; rNSW=291; rank_mean=303.200; match_rank= a 0 0 0 0 0 0 0 0 0 479 615 1432 16 24 57 102 73 2127 355 760 c 0 0 0 0 0 0 0 0 0 1021 330 652 2413 13 26 2298 55 58 653 289 g 0 0 0 0 0 0 0 0 0 300 1002 254 6 2445 2394 12 2311 198 886 875 t 0 0 0 0 0 0 0 0 0 696 549 158 61 14 19 84 57 113 602 572
ERF11.DAP_M0039_AthalianaCistrome_rc_shift9 (ERF11.DAP:M0039:AthalianaCistrome_rc)	0.862	0.632	1.640	0.926	0.940	219	235	776	145	183	311.600	; assembly_13 versus ERF11.DAP_M0039_AthalianaCistrome_rc (ERF11.DAP:M0039:AthalianaCistrome_rc); m=23/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 311.6; ---------tgrCGGCGGmG ; cor=0.862; Ncor=0.632; logoDP=1.640; NsEucl=0.926; NSW=0.940; rcor=219; rNcor=235; rlogoDP=776; rNsEucl=145; rNSW=183; rank_mean=311.600; match_rank= a 0 0 0 0 0 0 0 0 0 124 106 230 16 0 13 0 0 14 191 38 c 0 0 0 0 0 0 0 0 0 137 24 8 541 0 9 571 1 54 319 4 g 0 0 0 0 0 0 0 0 0 20 353 351 0 596 574 0 584 524 3 501 t 0 0 0 0 0 0 0 0 0 315 113 7 39 0 0 25 11 4 83 53
ERF13.ampDAP_M0032_AthalianaCistrome_shift9 (ERF13.ampDAP:M0032:AthalianaCistrome)	0.823	0.603	4.938	0.920	0.930	382	332	399	222	293	325.600	; assembly_13 versus ERF13.ampDAP_M0032_AthalianaCistrome (ERF13.ampDAP:M0032:AthalianaCistrome); m=24/229; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 325.6; ---------hwryGGCGGCk ; cor=0.823; Ncor=0.603; logoDP=4.938; NsEucl=0.920; NSW=0.930; rcor=382; rNcor=332; rlogoDP=399; rNsEucl=222; rNSW=293; rank_mean=325.600; match_rank= a 0 0 0 0 0 0 0 0 0 181 242 303 100 3 51 1 0 2 0 5 c 0 0 0 0 0 0 0 0 0 169 54 49 201 0 0 577 0 0 577 31 g 0 0 0 0 0 0 0 0 0 61 133 156 6 575 484 0 573 576 0 307 t 0 0 0 0 0 0 0 0 0 167 149 70 271 0 43 0 5 0 1 235
RRTF1.ampDAP_M0066_AthalianaCistrome_shift4 (RRTF1.ampDAP:M0066:AthalianaCistrome)	0.851	0.493	5.300	0.927	0.942	253	739	330	139	174	327.000	; assembly_13 versus RRTF1.ampDAP_M0066_AthalianaCistrome (RRTF1.ampDAP:M0066:AthalianaCistrome); m=25/229; ncol2=19; w=-5; offset=-5; strand=D; shift=4; score= 327; ----rraaAWkrCGGCGsmg ; cor=0.851; Ncor=0.493; logoDP=5.300; NsEucl=0.927; NSW=0.942; rcor=253; rNcor=739; rlogoDP=330; rNsEucl=139; rNSW=174; rank_mean=327.000; match_rank= a 0 0 0 0 149 174 276 301 441 152 111 202 0 0 0 0 0 23 184 115 c 0 0 0 0 87 105 104 31 0 13 0 14 578 0 0 578 0 173 256 55 g 0 0 0 0 206 207 93 140 62 2 204 328 0 576 578 0 523 352 50 302 t 0 0 0 0 136 92 105 106 75 411 263 34 0 2 0 0 55 30 88 106
ERF4_MA0992.3_JASPAR_rc_shift9 (ERF4:MA0992.3:JASPAR_rc)	0.866	0.709	2.058	0.913	0.932	200	96	741	330	268	327.000	; assembly_13 versus ERF4_MA0992.3_JASPAR_rc (ERF4:MA0992.3:JASPAR_rc); m=26/229; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 327; ---------TGrCGGCGg-- ; cor=0.866; Ncor=0.709; logoDP=2.058; NsEucl=0.913; NSW=0.932; rcor=200; rNcor=96; rlogoDP=741; rNsEucl=330; rNSW=268; rank_mean=327.000; match_rank= a 0 0 0 0 0 0 0 0 0 86 56 627 8 1 17 19 5 126 0 0 c 0 0 0 0 0 0 0 0 0 91 25 13 1006 2 9 979 2 165 0 0 g 0 0 0 0 0 0 0 0 0 19 900 349 0 1015 992 1 1005 644 0 0 t 0 0 0 0 0 0 0 0 0 827 42 34 9 5 5 24 11 88 0 0
Zm00001d005892_MA1819.2_JASPAR_rc_shift12 (Zm00001d005892:MA1819.2:JASPAR_rc)	0.876	0.637	3.102	0.910	0.934	163	223	629	398	247	332.000	; assembly_13 versus Zm00001d005892_MA1819.2_JASPAR_rc (Zm00001d005892:MA1819.2:JASPAR_rc); m=27/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 332; ------------CGGCGGCG ; cor=0.876; Ncor=0.637; logoDP=3.102; NsEucl=0.910; NSW=0.934; rcor=163; rNcor=223; rlogoDP=629; rNsEucl=398; rNSW=247; rank_mean=332.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 990 748 1310 722 670 1200 765 872 c 0 0 0 0 0 0 0 0 0 0 0 0 24113 990 1696 25421 917 1794 25046 1309 g 0 0 0 0 0 0 0 0 0 0 0 0 1029 25022 23482 435 25251 23527 767 24431 t 0 0 0 0 0 0 0 0 0 0 0 0 1241 613 885 795 535 852 795 761
MYB3R3_MA2343.1_JASPAR_rc_shift9 (MYB3R3:MA2343.1:JASPAR_rc)	0.867	0.631	1.805	0.914	0.941	195	240	762	308	180	337.000	; assembly_13 versus MYB3R3_MA2343.1_JASPAR_rc (MYB3R3:MA2343.1:JASPAR_rc); m=28/229; ncol2=8; w=0; offset=0; strand=R; shift=9; score= 337; ---------TAACGGCg--- ; cor=0.867; Ncor=0.631; logoDP=1.805; NsEucl=0.914; NSW=0.941; rcor=195; rNcor=240; rlogoDP=762; rNsEucl=308; rNSW=180; rank_mean=337.000; match_rank= a 0 0 0 0 0 0 0 0 0 37 681 719 14 23 38 71 101 0 0 0 c 0 0 0 0 0 0 0 0 0 80 25 21 713 17 41 597 84 0 0 0 g 0 0 0 0 0 0 0 0 0 15 42 25 5 719 683 19 438 0 0 0 t 0 0 0 0 0 0 0 0 0 649 33 16 49 22 19 94 158 0 0 0
CRF10.DAP_M0045_AthalianaCistrome_rc_shift9 (CRF10.DAP:M0045:AthalianaCistrome_rc)	0.848	0.622	1.681	0.924	0.936	270	273	771	176	223	342.600	; assembly_13 versus CRF10.DAP_M0045_AthalianaCistrome_rc (CRF10.DAP:M0045:AthalianaCistrome_rc); m=29/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 342.6; ---------ygRCGGCGGmG ; cor=0.848; Ncor=0.622; logoDP=1.681; NsEucl=0.924; NSW=0.936; rcor=270; rNcor=273; rlogoDP=771; rNsEucl=176; rNSW=223; rank_mean=342.600; match_rank= a 0 0 0 0 0 0 0 0 0 126 133 161 18 0 10 1 0 11 195 41 c 0 0 0 0 0 0 0 0 0 182 58 6 549 0 0 553 7 38 319 8 g 0 0 0 0 0 0 0 0 0 37 289 432 0 600 590 0 578 547 7 485 t 0 0 0 0 0 0 0 0 0 255 120 1 33 0 0 46 15 4 79 66
AT5G23930_UN0357.2_JASPAR_rc_shift12 (AT5G23930:UN0357.2:JASPAR_rc)	0.879	0.639	3.807	0.905	0.928	156	217	544	485	312	342.800	; assembly_13 versus AT5G23930_UN0357.2_JASPAR_rc (AT5G23930:UN0357.2:JASPAR_rc); m=30/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 342.8; ------------yGGCGGCk ; cor=0.879; Ncor=0.639; logoDP=3.807; NsEucl=0.905; NSW=0.928; rcor=156; rNcor=217; rlogoDP=544; rNsEucl=485; rNSW=312; rank_mean=342.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 296 0 0 0 0 0 0 125 c 0 0 0 0 0 0 0 0 0 0 0 0 1135 0 0 2074 0 0 2074 91 g 0 0 0 0 0 0 0 0 0 0 0 0 43 2074 2074 0 2074 2074 0 1323 t 0 0 0 0 0 0 0 0 0 0 0 0 600 0 0 0 0 0 0 535
AT1G28160.ampDAP_M0035_AthalianaCistrome_rc_shift9 (AT1G28160.ampDAP:M0035:AthalianaCistrome_rc)	0.838	0.658	2.560	0.920	0.930	315	173	713	223	299	344.600	; assembly_13 versus AT1G28160.ampDAP_M0035_AthalianaCistrome_rc (AT1G28160.ampDAP:M0035:AthalianaCistrome_rc); m=31/229; ncol2=14; w=0; offset=0; strand=R; shift=9; score= 344.6; ---------yGrCGGCGGmG ; cor=0.838; Ncor=0.658; logoDP=2.560; NsEucl=0.920; NSW=0.930; rcor=315; rNcor=173; rlogoDP=713; rNsEucl=223; rNSW=299; rank_mean=344.600; match_rank= a 0 0 0 0 0 0 0 0 0 94 84 199 0 0 0 15 0 26 170 74 c 0 0 0 0 0 0 0 0 0 243 16 6 585 0 0 550 0 105 327 7 g 0 0 0 0 0 0 0 0 0 0 428 381 0 590 592 0 581 447 4 465 t 0 0 0 0 0 0 0 0 0 255 64 6 7 2 0 27 11 14 91 46
Zm00001d002364_MA1832.2_JASPAR_rc_shift10 (Zm00001d002364:MA1832.2:JASPAR_rc)	0.834	0.758	3.828	0.910	0.919	332	41	539	385	428	345.000	; assembly_13 versus Zm00001d002364_MA1832.2_JASPAR_rc (Zm00001d002364:MA1832.2:JASPAR_rc); m=32/229; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 345; ----------ggCGGCGGCg ; cor=0.834; Ncor=0.758; logoDP=3.828; NsEucl=0.910; NSW=0.919; rcor=332; rNcor=41; rlogoDP=539; rNsEucl=385; rNSW=428; rank_mean=345.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 2034 2750 0 0 0 0 0 0 903 2201 c 0 0 0 0 0 0 0 0 0 0 3763 3546 19090 0 0 19090 0 0 13670 3334 g 0 0 0 0 0 0 0 0 0 0 11352 11009 0 19090 19090 0 19090 19090 2981 11808 t 0 0 0 0 0 0 0 0 0 0 1941 1785 0 0 0 0 0 0 1536 1747
LBD19_IG1_AS2_B73_1_m1_EEAD0421_EEADannot_shift12 (LBD19_IG1_AS2_B73_1_m1:EEAD0421:EEADannot)	0.891	0.509	4.086	0.917	0.945	132	686	506	258	150	346.400	; assembly_13 versus LBD19_IG1_AS2_B73_1_m1_EEAD0421_EEADannot (LBD19_IG1_AS2_B73_1_m1:EEAD0421:EEADannot); m=33/229; ncol2=11; w=0; offset=3; strand=D; shift=12; score= 346.4; ------------CGGCGGCG ; cor=0.891; Ncor=0.509; logoDP=4.086; NsEucl=0.917; NSW=0.945; rcor=132; rNcor=686; rlogoDP=506; rNsEucl=258; rNSW=150; rank_mean=346.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 6 1 5 5 3 15 11 2 c 0 0 0 0 0 0 0 0 0 0 0 0 92 1 0 86 0 7 76 5 g 0 0 0 0 0 0 0 0 0 0 0 0 0 97 90 3 95 70 5 92 t 0 0 0 0 0 0 0 0 0 0 0 0 2 1 5 6 2 8 8 1
ERF094_MA1049.1_JASPAR_rc_shift12 (ERF094:MA1049.1:JASPAR_rc)	0.864	0.628	3.271	0.907	0.931	213	251	610	445	278	359.400	; assembly_13 versus ERF094_MA1049.1_JASPAR_rc (ERF094:MA1049.1:JASPAR_rc); m=34/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 359.4; ------------cGGCGGCk ; cor=0.864; Ncor=0.628; logoDP=3.271; NsEucl=0.907; NSW=0.931; rcor=213; rNcor=251; rlogoDP=610; rNsEucl=445; rNSW=278; rank_mean=359.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 173 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 482 0 49 975 0 0 999 192 g 0 0 0 0 0 0 0 0 0 0 0 0 104 999 951 0 877 999 0 461 t 0 0 0 0 0 0 0 0 0 0 0 0 241 0 0 25 122 0 0 346
ORA59_M0005_1.02_CISBP_rc_shift12 (ORA59:M0005_1.02:CISBP_rc)	0.864	0.628	3.298	0.907	0.931	214	252	606	451	282	361.000	; assembly_13 versus ORA59_M0005_1.02_CISBP_rc (ORA59:M0005_1.02:CISBP_rc); m=35/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 361; ------------cGGCGGCk ; cor=0.864; Ncor=0.628; logoDP=3.298; NsEucl=0.907; NSW=0.931; rcor=214; rNcor=252; rlogoDP=606; rNsEucl=451; rNSW=282; rank_mean=361.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 48 0 5 98 0 0 100 19 g 0 0 0 0 0 0 0 0 0 0 0 0 11 100 95 0 88 100 0 46 t 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 2 12 0 0 35
At2g33710.ampDAP_M0021_AthalianaCistrome_rc_shift4 (At2g33710.ampDAP:M0021:AthalianaCistrome_rc)	0.867	0.530	1.537	0.932	0.948	194	599	788	118	138	367.400	; assembly_13 versus At2g33710.ampDAP_M0021_AthalianaCistrome_rc (At2g33710.ampDAP:M0021:AthalianaCistrome_rc); m=36/229; ncol2=18; w=-5; offset=-5; strand=R; shift=4; score= 367.4; ----krmdrwkrCGGCGGCG ; cor=0.867; Ncor=0.530; logoDP=1.537; NsEucl=0.932; NSW=0.948; rcor=194; rNcor=599; rlogoDP=788; rNsEucl=118; rNSW=138; rank_mean=367.400; match_rank= a 0 0 0 0 131 166 205 169 219 177 146 262 22 0 24 0 0 14 111 25 c 0 0 0 0 65 102 204 55 42 129 25 34 470 1 6 596 2 109 451 29 g 0 0 0 0 249 246 61 206 221 18 241 265 3 574 566 0 580 477 10 463 t 0 0 0 0 155 86 130 170 118 276 188 39 105 25 4 4 18 0 28 83
LBD13.ampDAP_M0471_AthalianaCistrome_shift12 (LBD13.ampDAP:M0471:AthalianaCistrome)	0.924	0.411	3.258	0.941	0.972	75	1040	611	74	51	370.200	; assembly_13 versus LBD13.ampDAP_M0471_AthalianaCistrome (LBD13.ampDAP:M0471:AthalianaCistrome); m=37/229; ncol2=15; w=0; offset=3; strand=D; shift=12; score= 370.2; ------------CGsCGgad ; cor=0.924; Ncor=0.411; logoDP=3.258; NsEucl=0.941; NSW=0.972; rcor=75; rNcor=1040; rlogoDP=611; rNsEucl=74; rNSW=51; rank_mean=370.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 34 34 4 17 23 116 298 245 c 0 0 0 0 0 0 0 0 0 0 0 0 494 6 210 581 0 110 94 14 g 0 0 0 0 0 0 0 0 0 0 0 0 4 507 384 0 560 280 106 170 t 0 0 0 0 0 0 0 0 0 0 0 0 66 51 0 0 15 92 100 169
NtERF2_NtERF2_Athamap_rc_shift13 (NtERF2:NtERF2:Athamap_rc)	0.875	0.557	1.622	0.916	0.951	167	511	781	271	126	371.200	; assembly_13 versus NtERF2_NtERF2_Athamap_rc (NtERF2:NtERF2:Athamap_rc); m=38/229; ncol2=7; w=0; offset=4; strand=R; shift=13; score= 371.2; -------------GGCGGCr ; cor=0.875; Ncor=0.557; logoDP=1.622; NsEucl=0.916; NSW=0.951; rcor=167; rNcor=511; rlogoDP=781; rNsEucl=271; rNSW=126; rank_mean=371.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 4 c 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 13 2 3 12 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 13 10 0 11 10 1 7 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 1 0 2
AT2G33710_MA1245.1_JASPAR_rc_shift9 (AT2G33710:MA1245.1:JASPAR_rc)	0.839	0.615	1.516	0.921	0.932	307	288	790	210	269	372.800	; assembly_13 versus AT2G33710_MA1245.1_JASPAR_rc (AT2G33710:MA1245.1:JASPAR_rc); m=39/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 372.8; ---------ykrCGGCGGmG ; cor=0.839; Ncor=0.615; logoDP=1.516; NsEucl=0.921; NSW=0.932; rcor=307; rNcor=288; rlogoDP=790; rNsEucl=210; rNSW=269; rank_mean=372.800; match_rank= a 0 0 0 0 0 0 0 0 0 123 67 192 1 0 0 7 0 12 160 32 c 0 0 0 0 0 0 0 0 0 156 17 11 551 0 11 551 3 112 350 13 g 0 0 0 0 0 0 0 0 0 11 350 372 0 583 572 0 573 456 8 475 t 0 0 0 0 0 0 0 0 0 293 149 8 31 0 0 25 7 3 65 63
ERF3.ampDAP_M0074_AthalianaCistrome_shift9 (ERF3.ampDAP:M0074:AthalianaCistrome)	0.843	0.463	5.177	0.924	0.937	290	843	349	170	217	373.800	; assembly_13 versus ERF3.ampDAP_M0074_AthalianaCistrome (ERF3.ampDAP:M0074:AthalianaCistrome); m=40/229; ncol2=20; w=0; offset=0; strand=D; shift=9; score= 373.8; ---------yGrCGGCGGmg ; cor=0.843; Ncor=0.463; logoDP=5.177; NsEucl=0.924; NSW=0.937; rcor=290; rNcor=843; rlogoDP=349; rNsEucl=170; rNSW=217; rank_mean=373.800; match_rank= a 0 0 0 0 0 0 0 0 0 87 58 182 0 0 2 2 0 51 205 104 c 0 0 0 0 0 0 0 0 0 164 9 5 557 0 2 556 0 87 214 16 g 0 0 0 0 0 0 0 0 0 9 399 376 0 567 563 0 504 398 34 370 t 0 0 0 0 0 0 0 0 0 307 101 4 10 0 0 9 63 31 114 77
ERF15_MA1231.3_JASPAR_rc_shift12 (ERF15:MA1231.3:JASPAR_rc)	0.864	0.628	3.257	0.905	0.929	215	253	612	481	310	374.200	; assembly_13 versus ERF15_MA1231.3_JASPAR_rc (ERF15:MA1231.3:JASPAR_rc); m=41/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 374.2; ------------hGGCGGCk ; cor=0.864; Ncor=0.628; logoDP=3.257; NsEucl=0.905; NSW=0.929; rcor=215; rNcor=253; rlogoDP=612; rNsEucl=481; rNSW=310; rank_mean=374.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 581 8 39 12 9 5 18 87 c 0 0 0 0 0 0 0 0 0 0 0 0 911 8 14 2067 3 1 2078 94 g 0 0 0 0 0 0 0 0 0 0 0 0 62 2107 2066 3 2062 2124 7 942 t 0 0 0 0 0 0 0 0 0 0 0 0 579 10 14 51 59 3 30 1010
ERF9_MA1257.2_JASPAR_shift1 (ERF9:MA1257.2:JASPAR)	0.841	0.487	4.857	0.923	0.936	295	767	410	179	231	376.400	; assembly_13 versus ERF9_MA1257.2_JASPAR (ERF9:MA1257.2:JASPAR); m=42/229; ncol2=19; w=-8; offset=-8; strand=D; shift=1; score= 376.4; -ggcggmkryGrCGGCGGmG ; cor=0.841; Ncor=0.487; logoDP=4.857; NsEucl=0.923; NSW=0.936; rcor=295; rNcor=767; rlogoDP=410; rNsEucl=179; rNSW=231; rank_mean=376.400; match_rank= a 0 89 109 106 83 106 143 104 161 111 73 167 26 0 10 16 4 31 204 52 c 0 24 50 265 32 63 239 32 37 167 6 15 496 0 0 493 0 34 253 8 g 0 353 336 69 343 333 39 269 270 17 383 360 0 551 544 0 514 483 6 439 t 0 89 60 115 97 53 134 150 87 260 93 13 33 4 1 46 37 7 92 56
ERF8.DAP_M0044_AthalianaCistrome_rc_shift10 (ERF8.DAP:M0044:AthalianaCistrome_rc)	0.875	0.547	1.016	0.925	0.943	169	545	847	167	164	378.400	; assembly_13 versus ERF8.DAP_M0044_AthalianaCistrome_rc (ERF8.DAP:M0044:AthalianaCistrome_rc); m=43/229; ncol2=15; w=0; offset=1; strand=R; shift=10; score= 378.4; ----------krCGGCGGmG ; cor=0.875; Ncor=0.547; logoDP=1.016; NsEucl=0.925; NSW=0.943; rcor=169; rNcor=545; rlogoDP=847; rNsEucl=167; rNSW=164; rank_mean=378.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 127 211 0 0 34 5 0 2 156 35 c 0 0 0 0 0 0 0 0 0 0 39 33 508 0 0 570 1 32 349 7 g 0 0 0 0 0 0 0 0 0 0 274 314 0 587 555 0 587 545 0 492 t 0 0 0 0 0 0 0 0 0 0 149 31 81 2 0 14 1 10 84 55
ESE1_MA1264.1_JASPAR_shift9 (ESE1:MA1264.1:JASPAR)	0.806	0.591	5.092	0.915	0.920	474	384	366	298	424	389.200	; assembly_13 versus ESE1_MA1264.1_JASPAR (ESE1:MA1264.1:JASPAR); m=44/229; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 389.2; ---------ygryGGCGGCG ; cor=0.806; Ncor=0.591; logoDP=5.092; NsEucl=0.915; NSW=0.920; rcor=474; rNcor=384; rlogoDP=366; rNsEucl=298; rNSW=424; rank_mean=389.200; match_rank= a 0 0 0 0 0 0 0 0 0 124 137 189 78 4 55 3 0 0 13 5 c 0 0 0 0 0 0 0 0 0 213 59 45 335 0 2 570 0 4 525 6 g 0 0 0 0 0 0 0 0 0 47 277 327 2 587 534 0 591 587 0 503 t 0 0 0 0 0 0 0 0 0 207 118 30 176 0 0 18 0 0 53 77
ABR1_MA1244.1_JASPAR_shift1 (ABR1:MA1244.1:JASPAR)	0.828	0.480	5.096	0.921	0.931	353	783	364	217	284	400.200	; assembly_13 versus ABR1_MA1244.1_JASPAR (ABR1:MA1244.1:JASPAR); m=45/229; ncol2=19; w=-8; offset=-8; strand=D; shift=1; score= 400.2; -ggcgradrtkrCGGCGGmG ; cor=0.828; Ncor=0.480; logoDP=5.096; NsEucl=0.921; NSW=0.931; rcor=353; rNcor=783; rlogoDP=364; rNsEucl=217; rNSW=284; rank_mean=400.200; match_rank= a 0 122 145 140 100 181 237 225 253 103 59 150 2 0 0 4 5 33 196 66 c 0 57 75 230 64 79 149 26 18 97 15 27 590 0 12 584 10 105 298 36 g 0 317 281 96 308 285 79 186 193 14 308 401 0 598 588 0 550 445 30 421 t 0 104 99 134 128 55 135 163 136 386 218 22 8 2 0 12 35 17 76 77
Zm00001d020595_MA1821.2_JASPAR_shift10 (Zm00001d020595:MA1821.2:JASPAR)	0.804	0.731	6.292	0.899	0.899	481	60	209	613	662	405.000	; assembly_13 versus Zm00001d020595_MA1821.2_JASPAR (Zm00001d020595:MA1821.2:JASPAR); m=46/229; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 405; ----------ggCGGCGGCg ; cor=0.804; Ncor=0.731; logoDP=6.292; NsEucl=0.899; NSW=0.899; rcor=481; rNcor=60; rlogoDP=209; rNsEucl=613; rNSW=662; rank_mean=405.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 856 962 0 0 1 0 0 0 0 759 c 0 0 0 0 0 0 0 0 0 0 1437 1187 7064 0 0 7062 0 0 7056 1193 g 0 0 0 0 0 0 0 0 0 0 3902 4239 0 7064 7061 1 7064 7064 3 4405 t 0 0 0 0 0 0 0 0 0 0 869 676 0 0 2 1 0 0 5 707
ERF024PS_EEAD0159_EEADannot_rc_shift9 (ERF024PS:EEAD0159:EEADannot_rc)	0.807	0.592	1.972	0.922	0.934	464	374	746	193	250	405.400	; assembly_13 versus ERF024PS_EEAD0159_EEADannot_rc (ERF024PS:EEAD0159:EEADannot_rc); m=47/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 405.4; ---------mrryGkCGGCR ; cor=0.807; Ncor=0.592; logoDP=1.972; NsEucl=0.922; NSW=0.934; rcor=464; rNcor=374; rlogoDP=746; rNsEucl=193; rNSW=250; rank_mean=405.400; match_rank= a 0 0 0 0 0 0 0 0 0 25 31 33 4 0 24 3 0 7 10 26 c 0 0 0 0 0 0 0 0 0 35 8 10 60 0 0 97 0 0 68 3 g 0 0 0 0 0 0 0 0 0 23 53 41 0 100 44 0 100 93 3 68 t 0 0 0 0 0 0 0 0 0 17 8 16 36 0 32 0 0 0 19 3
DEAR3_MA1376.2_JASPAR_rc_shift13 (DEAR3:MA1376.2:JASPAR_rc)	0.864	0.550	1.397	0.912	0.946	211	537	798	343	144	406.600	; assembly_13 versus DEAR3_MA1376.2_JASPAR_rc (DEAR3:MA1376.2:JASPAR_rc); m=48/229; ncol2=7; w=0; offset=4; strand=R; shift=13; score= 406.6; -------------GkCGGyG ; cor=0.864; Ncor=0.550; logoDP=1.397; NsEucl=0.912; NSW=0.946; rcor=211; rNcor=537; rlogoDP=798; rNsEucl=343; rNSW=144; rank_mean=406.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 34 101 26 8 26 17 41 c 0 0 0 0 0 0 0 0 0 0 0 0 0 68 56 865 19 58 634 24 g 0 0 0 0 0 0 0 0 0 0 0 0 0 828 524 44 934 889 15 787 t 0 0 0 0 0 0 0 0 0 0 0 0 0 70 320 66 39 27 335 148
ERF9_MA1257.1_JASPAR_shift0 (ERF9:MA1257.1:JASPAR)	0.841	0.440	4.857	0.923	0.936	295	927	410	179	231	408.400	; assembly_13 versus ERF9_MA1257.1_JASPAR (ERF9:MA1257.1:JASPAR); m=49/229; ncol2=21; w=-9; offset=-9; strand=D; shift=0; score= 408.4; yggcggmkryGrCGGCGGmG ; cor=0.841; Ncor=0.440; logoDP=4.857; NsEucl=0.923; NSW=0.936; rcor=295; rNcor=927; rlogoDP=410; rNsEucl=179; rNSW=231; rank_mean=408.400; match_rank= a 90 89 109 106 83 106 143 104 161 111 73 167 26 0 10 16 4 31 204 52 c 246 24 50 265 32 63 239 32 37 167 6 15 496 0 0 493 0 34 253 8 g 79 353 336 69 343 333 39 269 270 17 383 360 0 551 544 0 514 483 6 439 t 140 89 60 115 97 53 134 150 87 260 93 13 33 4 1 46 37 7 92 56
CRF4.ampDAP_M0079_AthalianaCistrome_shift9 (CRF4.ampDAP:M0079:AthalianaCistrome)	0.803	0.589	5.209	0.912	0.915	484	392	344	345	479	408.800	; assembly_13 versus CRF4.ampDAP_M0079_AthalianaCistrome (CRF4.ampDAP:M0079:AthalianaCistrome); m=50/229; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 408.8; ---------ygRCGGCGGCG ; cor=0.803; Ncor=0.589; logoDP=5.209; NsEucl=0.912; NSW=0.915; rcor=484; rNcor=392; rlogoDP=344; rNsEucl=345; rNSW=479; rank_mean=408.800; match_rank= a 0 0 0 0 0 0 0 0 0 138 102 158 14 8 10 4 0 1 100 17 c 0 0 0 0 0 0 0 0 0 192 36 1 447 0 4 561 0 33 460 9 g 0 0 0 0 0 0 0 0 0 19 382 420 0 585 586 0 600 566 0 530 t 0 0 0 0 0 0 0 0 0 251 80 21 139 7 0 35 0 0 40 44
ESE3_MA1236.1_JASPAR_shift3 (ESE3:MA1236.1:JASPAR)	0.826	0.478	4.905	0.921	0.931	365	791	405	212	273	409.200	; assembly_13 versus ESE3_MA1236.1_JASPAR (ESE3:MA1236.1:JASPAR); m=51/229; ncol2=19; w=-6; offset=-6; strand=D; shift=3; score= 409.2; ---cgghgghggCGGyGGmG ; cor=0.826; Ncor=0.478; logoDP=4.905; NsEucl=0.921; NSW=0.931; rcor=365; rNcor=791; rlogoDP=405; rNsEucl=212; rNSW=273; rank_mean=409.200; match_rank= a 0 0 0 148 96 113 186 146 114 178 90 146 12 0 1 29 0 15 270 46 c 0 0 0 219 48 65 185 26 30 153 7 17 543 0 3 400 0 45 211 9 g 0 0 0 100 362 368 64 307 331 28 374 385 0 596 592 0 587 524 19 501 t 0 0 0 129 90 50 161 117 121 237 125 48 41 0 0 167 9 12 96 40
AS2.DAP_M0477_AthalianaCistrome_rc_shift0 (AS2.DAP:M0477:AthalianaCistrome_rc)	0.871	0.456	1.051	0.940	0.960	185	865	842	78	87	411.400	; assembly_13 versus AS2.DAP_M0477_AthalianaCistrome_rc (AS2.DAP:M0477:AthalianaCistrome_rc); m=52/229; ncol2=21; w=-9; offset=-9; strand=R; shift=0; score= 411.4; CGsCGgmrrwkrCGGcGgmg ; cor=0.871; Ncor=0.456; logoDP=1.051; NsEucl=0.940; NSW=0.960; rcor=185; rNcor=865; rlogoDP=842; rNsEucl=78; rNSW=87; rank_mean=411.400; match_rank= a 36 39 16 22 9 69 209 166 189 180 97 126 54 2 0 99 34 104 178 94 c 319 16 133 411 0 18 110 10 22 102 52 51 357 2 65 275 10 18 123 26 g 8 350 287 1 407 298 55 192 155 16 163 233 0 433 372 14 362 272 47 221 t 76 34 3 5 23 54 65 71 73 141 127 29 28 2 2 51 33 45 91 98
ERF118_MA1671.1_JASPAR_rc_shift9 (ERF118:MA1671.1:JASPAR_rc)	0.778	0.778	3.837	0.911	0.912	628	29	538	368	499	412.400	; assembly_13 versus ERF118_MA1671.1_JASPAR_rc (ERF118:MA1671.1:JASPAR_rc); m=53/229; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 412.4; ---------ygGCGGCGghg ; cor=0.778; Ncor=0.778; logoDP=3.837; NsEucl=0.911; NSW=0.912; rcor=628; rNcor=29; rlogoDP=538; rNsEucl=368; rNSW=499; rank_mean=412.400; match_rank= a 0 0 0 0 0 0 0 0 0 639 617 48 30 7 1 10 26 482 894 643 c 0 0 0 0 0 0 0 0 0 1537 286 11 3190 3 2 3186 0 354 1143 234 g 0 0 0 0 0 0 0 0 0 292 1903 3338 9 3370 3396 8 3343 2309 385 1819 t 0 0 0 0 0 0 0 0 0 931 593 2 170 19 0 195 30 254 977 703
ERF13_MA1004.2_JASPAR_rc_shift13 (ERF13:MA1004.2:JASPAR_rc)	0.880	0.560	2.476	0.906	0.938	155	505	719	477	213	413.800	; assembly_13 versus ERF13_MA1004.2_JASPAR_rc (ERF13:MA1004.2:JASPAR_rc); m=54/229; ncol2=7; w=0; offset=4; strand=R; shift=13; score= 413.8; -------------GgCGGCs ; cor=0.880; Ncor=0.560; logoDP=2.476; NsEucl=0.906; NSW=0.938; rcor=155; rNcor=505; rlogoDP=719; rNsEucl=477; rNSW=213; rank_mean=413.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 113 0 0 0 0 22 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 145 983 16 32 951 283 g 0 0 0 0 0 0 0 0 0 0 0 0 0 999 645 16 983 951 49 478 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 97 0 0 16 0 217
ERF1_M0025_1.02_CISBP_rc_shift11 (ERF1:M0025_1.02:CISBP_rc)	0.834	0.625	3.698	0.905	0.919	334	264	557	490	435	416.000	; assembly_13 versus ERF1_M0025_1.02_CISBP_rc (ERF1:M0025_1.02:CISBP_rc); m=55/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 416; -----------ryGGCGGCk ; cor=0.834; Ncor=0.625; logoDP=3.698; NsEucl=0.905; NSW=0.919; rcor=334; rNcor=264; rlogoDP=557; rNsEucl=490; rNSW=435; rank_mean=416.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 35 7 0 0 0 0 0 0 10 c 0 0 0 0 0 0 0 0 0 0 0 24 50 0 0 100 0 0 100 10 g 0 0 0 0 0 0 0 0 0 0 0 26 7 100 100 0 100 100 0 50 t 0 0 0 0 0 0 0 0 0 0 0 15 36 0 0 0 0 0 0 30
ERF094_MA1049.2_JASPAR_rc_shift13 (ERF094:MA1049.2:JASPAR_rc)	0.891	0.567	2.800	0.903	0.934	133	473	679	547	254	417.200	; assembly_13 versus ERF094_MA1049.2_JASPAR_rc (ERF094:MA1049.2:JASPAR_rc); m=56/229; ncol2=7; w=0; offset=4; strand=R; shift=13; score= 417.2; -------------GGCGGCk ; cor=0.891; Ncor=0.567; logoDP=2.800; NsEucl=0.903; NSW=0.934; rcor=133; rNcor=473; rlogoDP=679; rNsEucl=547; rNSW=254; rank_mean=417.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 975 0 0 999 192 g 0 0 0 0 0 0 0 0 0 0 0 0 0 999 951 0 877 999 0 461 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 122 0 0 346
ERF105_MA1000.2_JASPAR_shift8 (ERF105:MA1000.2:JASPAR)	0.798	0.585	5.343	0.911	0.913	508	409	324	361	493	419.000	; assembly_13 versus ERF105_MA1000.2_JASPAR (ERF105:MA1000.2:JASPAR); m=57/229; ncol2=15; w=-1; offset=-1; strand=D; shift=8; score= 419; --------ghrryGGCGGCG ; cor=0.798; Ncor=0.585; logoDP=5.343; NsEucl=0.911; NSW=0.913; rcor=508; rNcor=409; rlogoDP=324; rNsEucl=361; rNSW=493; rank_mean=419.000; match_rank= a 0 0 0 0 0 0 0 0 144 149 168 189 50 0 21 1 0 0 21 1 c 0 0 0 0 0 0 0 0 57 181 44 37 307 0 0 569 0 1 544 0 g 0 0 0 0 0 0 0 0 278 36 257 312 0 586 565 0 586 585 0 523 t 0 0 0 0 0 0 0 0 107 220 117 48 229 0 0 16 0 0 21 62
Zm00001d020595_MA1821.1_JASPAR_shift10 (Zm00001d020595:MA1821.1:JASPAR)	0.804	0.670	6.292	0.899	0.899	481	151	209	613	662	423.200	; assembly_13 versus Zm00001d020595_MA1821.1_JASPAR (Zm00001d020595:MA1821.1:JASPAR); m=58/229; ncol2=11; w=0; offset=1; strand=D; shift=10; score= 423.2; ----------ggCGGCGGCg ; cor=0.804; Ncor=0.670; logoDP=6.292; NsEucl=0.899; NSW=0.899; rcor=481; rNcor=151; rlogoDP=209; rNsEucl=613; rNSW=662; rank_mean=423.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 856 962 0 0 1 0 0 0 0 759 c 0 0 0 0 0 0 0 0 0 0 1437 1187 7064 0 0 7062 0 0 7056 1193 g 0 0 0 0 0 0 0 0 0 0 3902 4239 0 7064 7061 1 7064 7064 3 4405 t 0 0 0 0 0 0 0 0 0 0 869 676 0 0 2 1 0 0 5 707
ERF003_UN0363.1_JASPAR_rc_shift10 (ERF003:UN0363.1:JASPAR_rc)	0.835	0.596	1.599	0.913	0.924	325	362	783	326	363	431.800	; assembly_13 versus ERF003_UN0363.1_JASPAR_rc (ERF003:UN0363.1:JASPAR_rc); m=59/229; ncol2=13; w=0; offset=1; strand=R; shift=10; score= 431.8; ----------ggCGGCGGaG ; cor=0.835; Ncor=0.596; logoDP=1.599; NsEucl=0.913; NSW=0.924; rcor=325; rNcor=362; rlogoDP=783; rNsEucl=326; rNSW=363; rank_mean=431.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 427 484 50 7 23 119 17 14 1442 95 c 0 0 0 0 0 0 0 0 0 0 166 214 2055 4 52 1796 4 31 463 23 g 0 0 0 0 0 0 0 0 0 0 1095 1288 4 2165 2086 9 2127 2112 19 1992 t 0 0 0 0 0 0 0 0 0 0 489 191 68 1 16 253 29 20 253 67
Zm00001d031796_MA1831.1_JASPAR_shift9 (Zm00001d031796:MA1831.1:JASPAR)	0.769	0.705	4.282	0.910	0.910	674	102	473	394	521	432.800	; assembly_13 versus Zm00001d031796_MA1831.1_JASPAR (Zm00001d031796:MA1831.1:JASPAR); m=60/229; ncol2=12; w=0; offset=0; strand=D; shift=9; score= 432.8; ---------ssACGGCGACg ; cor=0.769; Ncor=0.705; logoDP=4.282; NsEucl=0.910; NSW=0.910; rcor=674; rNcor=102; rlogoDP=473; rNsEucl=394; rNSW=521; rank_mean=432.800; match_rank= a 0 0 0 0 0 0 0 0 0 1688 1680 11164 199 309 1454 227 282 10265 242 2022 c 0 0 0 0 0 0 0 0 0 6667 3534 807 13089 323 655 13138 514 1019 12691 2882 g 0 0 0 0 0 0 0 0 0 3858 7250 1352 257 13025 11443 239 12856 2008 634 7673 t 0 0 0 0 0 0 0 0 0 1608 1357 498 276 164 269 217 169 529 254 1244
Zm00001d031796_MA1831.2_JASPAR_shift10 (Zm00001d031796:MA1831.2:JASPAR)	0.784	0.712	4.280	0.905	0.909	589	81	475	502	538	437.000	; assembly_13 versus Zm00001d031796_MA1831.2_JASPAR (Zm00001d031796:MA1831.2:JASPAR); m=61/229; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 437; ----------sACGGCGACg ; cor=0.784; Ncor=0.712; logoDP=4.280; NsEucl=0.905; NSW=0.909; rcor=589; rNcor=81; rlogoDP=475; rNsEucl=502; rNSW=538; rank_mean=437.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 1680 11164 199 309 1454 227 282 10265 242 2022 c 0 0 0 0 0 0 0 0 0 0 3534 807 13089 323 655 13138 514 1019 12691 2882 g 0 0 0 0 0 0 0 0 0 0 7250 1352 257 13025 11443 239 12856 2008 634 7673 t 0 0 0 0 0 0 0 0 0 0 1357 498 276 164 269 217 169 529 254 1244
ERF024Ved_EEAD0158_EEADannot_shift9 (ERF024Ved:EEAD0158:EEADannot)	0.777	0.570	4.556	0.917	0.923	634	465	446	268	379	438.400	; assembly_13 versus ERF024Ved_EEAD0158_EEADannot (ERF024Ved:EEAD0158:EEADannot); m=62/229; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 438.4; ---------crryGkCGGYr ; cor=0.777; Ncor=0.570; logoDP=4.556; NsEucl=0.917; NSW=0.923; rcor=634; rNcor=465; rlogoDP=446; rNsEucl=268; rNSW=379; rank_mean=438.400; match_rank= a 0 0 0 0 0 0 0 0 0 24 26 28 2 0 22 1 0 5 3 28 c 0 0 0 0 0 0 0 0 0 39 7 10 56 0 0 99 0 0 68 8 g 0 0 0 0 0 0 0 0 0 17 54 41 0 100 36 0 100 95 2 58 t 0 0 0 0 0 0 0 0 0 20 13 21 42 0 42 0 0 0 27 6
LBD16_RA2_B73_1_m1_EEAD0419_EEADannot_rc_shift12 (LBD16_RA2_B73_1_m1:EEAD0419:EEADannot_rc)	0.910	0.404	1.773	0.925	0.955	92	1068	763	168	113	440.800	; assembly_13 versus LBD16_RA2_B73_1_m1_EEAD0419_EEADannot_rc (LBD16_RA2_B73_1_m1:EEAD0419:EEADannot_rc); m=63/229; ncol2=15; w=0; offset=3; strand=R; shift=12; score= 440.8; ------------CGGCGGCG ; cor=0.910; Ncor=0.404; logoDP=1.773; NsEucl=0.925; NSW=0.955; rcor=92; rNcor=1068; rlogoDP=763; rNsEucl=168; rNSW=113; rank_mean=440.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 4 3 1 8 1 3 15 6 c 0 0 0 0 0 0 0 0 0 0 0 0 89 2 11 89 1 11 74 6 g 0 0 0 0 0 0 0 0 0 0 0 0 5 94 88 2 96 81 7 84 t 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 1 2 5 4 4
LBD13_MA2021.2_JASPAR_rc_shift11 (LBD13:MA2021.2:JASPAR_rc)	0.842	0.612	2.390	0.903	0.924	292	299	728	544	365	445.600	; assembly_13 versus LBD13_MA2021.2_JASPAR_rc (LBD13:MA2021.2:JASPAR_rc); m=64/229; ncol2=8; w=0; offset=2; strand=R; shift=11; score= 445.6; -----------aCGGTGGa- ; cor=0.842; Ncor=0.612; logoDP=2.390; NsEucl=0.903; NSW=0.924; rcor=292; rNcor=299; rlogoDP=728; rNsEucl=544; rNSW=365; rank_mean=445.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 628 18 8 9 72 17 39 635 0 c 0 0 0 0 0 0 0 0 0 0 0 143 980 16 8 168 4 20 145 0 g 0 0 0 0 0 0 0 0 0 0 0 227 11 1021 1031 6 1018 979 44 0 t 0 0 0 0 0 0 0 0 0 0 0 57 46 10 7 809 16 17 231 0
ERF11.ampDAP_M0072_AthalianaCistrome_shift4 (ERF11.ampDAP:M0072:AthalianaCistrome)	0.815	0.448	5.227	0.918	0.925	421	898	343	252	350	452.800	; assembly_13 versus ERF11.ampDAP_M0072_AthalianaCistrome (ERF11.ampDAP:M0072:AthalianaCistrome); m=65/229; ncol2=20; w=-5; offset=-5; strand=D; shift=4; score= 452.8; ----rrwwayGrCGGCGghg ; cor=0.815; Ncor=0.448; logoDP=5.227; NsEucl=0.918; NSW=0.925; rcor=421; rNcor=898; rlogoDP=343; rNsEucl=252; rNSW=350; rank_mean=452.800; match_rank= a 0 0 0 0 156 187 209 234 281 75 30 158 0 0 0 0 5 54 171 106 c 0 0 0 0 76 74 124 44 36 147 0 3 569 0 0 568 0 123 193 32 g 0 0 0 0 216 209 79 123 138 0 466 383 0 568 569 0 508 349 53 326 t 0 0 0 0 121 99 157 168 114 347 73 25 0 1 0 1 56 43 152 105
AT3G10030.DAP_M0781_AthalianaCistrome_shift6 (AT3G10030.DAP:M0781:AthalianaCistrome)	0.781	0.613	4.705	0.909	0.909	614	294	425	406	531	454.000	; assembly_13 versus AT3G10030.DAP_M0781_AthalianaCistrome (AT3G10030.DAP:M0781:AthalianaCistrome); m=66/229; ncol2=14; w=-3; offset=-3; strand=D; shift=6; score= 454; ------adtTAACGGCGtya ; cor=0.781; Ncor=0.613; logoDP=4.705; NsEucl=0.909; NSW=0.909; rcor=614; rNcor=294; rlogoDP=425; rNsEucl=406; rNSW=531; rank_mean=454.000; match_rank= a 0 0 0 0 0 0 265 172 77 23 512 598 1 3 5 122 94 105 59 297 c 0 0 0 0 0 0 139 92 89 0 9 0 597 0 32 413 12 62 194 29 g 0 0 0 0 0 0 56 183 101 0 76 0 0 594 548 0 481 94 47 139 t 0 0 0 0 0 0 138 151 331 575 1 0 0 1 13 63 11 337 298 133
ERF7.DAP_M0018_AthalianaCistrome_rc_shift9 (ERF7.DAP:M0018:AthalianaCistrome_rc)	0.872	0.457	0.279	0.935	0.953	177	863	1021	104	117	456.400	; assembly_13 versus ERF7.DAP_M0018_AthalianaCistrome_rc (ERF7.DAP:M0018:AthalianaCistrome_rc); m=67/229; ncol2=21; w=0; offset=0; strand=R; shift=9; score= 456.4; ---------tgrCGGCGGmG ; cor=0.872; Ncor=0.457; logoDP=0.279; NsEucl=0.935; NSW=0.953; rcor=177; rNcor=863; rlogoDP=1021; rNsEucl=104; rNSW=117; rank_mean=456.400; match_rank= a 0 0 0 0 0 0 0 0 0 120 75 252 18 0 13 29 18 49 218 75 c 0 0 0 0 0 0 0 0 0 133 35 10 520 0 0 494 0 40 230 20 g 0 0 0 0 0 0 0 0 0 24 394 327 0 593 574 0 525 467 20 411 t 0 0 0 0 0 0 0 0 0 316 89 4 55 0 6 70 50 37 125 87
Zm00001d002364_MA1832.1_JASPAR_rc_shift10 (Zm00001d002364:MA1832.1:JASPAR_rc)	0.834	0.695	0.250	0.910	0.919	332	114	1037	385	428	459.200	; assembly_13 versus Zm00001d002364_MA1832.1_JASPAR_rc (Zm00001d002364:MA1832.1:JASPAR_rc); m=68/229; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 459.2; ----------ggCGGCGGCg ; cor=0.834; Ncor=0.695; logoDP=0.250; NsEucl=0.910; NSW=0.919; rcor=332; rNcor=114; rlogoDP=1037; rNsEucl=385; rNSW=428; rank_mean=459.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 2034 2750 0 0 0 0 0 0 903 2201 c 0 0 0 0 0 0 0 0 0 0 3763 3546 19090 0 0 19090 0 0 13670 3334 g 0 0 0 0 0 0 0 0 0 0 11352 11009 0 19090 19090 0 19090 19090 2981 11808 t 0 0 0 0 0 0 0 0 0 0 1941 1785 0 0 0 0 0 0 1536 1747
ERF13_MA1254.1_JASPAR_rc_shift8 (ERF13:MA1254.1:JASPAR_rc)	0.820	0.601	0.347	0.918	0.925	399	342	977	254	352	464.800	; assembly_13 versus ERF13_MA1254.1_JASPAR_rc (ERF13:MA1254.1:JASPAR_rc); m=69/229; ncol2=15; w=-1; offset=-1; strand=R; shift=8; score= 464.8; --------rwaayGGCGGCk ; cor=0.820; Ncor=0.601; logoDP=0.347; NsEucl=0.918; NSW=0.925; rcor=399; rNcor=342; rlogoDP=977; rNsEucl=254; rNSW=352; rank_mean=464.800; match_rank= a 0 0 0 0 0 0 0 0 178 253 267 345 103 0 32 0 0 0 0 1 c 0 0 0 0 0 0 0 0 77 127 37 16 151 0 0 567 0 0 567 28 g 0 0 0 0 0 0 0 0 231 47 126 124 7 570 518 0 570 570 0 300 t 0 0 0 0 0 0 0 0 84 143 140 85 309 0 20 3 0 0 3 241
RAP2-12_MA1256.2_JASPAR_shift10 (RAP2-12:MA1256.2:JASPAR)	0.784	0.653	4.589	0.903	0.905	586	184	440	543	585	467.600	; assembly_13 versus RAP2-12_MA1256.2_JASPAR (RAP2-12:MA1256.2:JASPAR); m=70/229; ncol2=11; w=0; offset=1; strand=D; shift=10; score= 467.6; ----------rryGGCGGCG ; cor=0.784; Ncor=0.653; logoDP=4.589; NsEucl=0.903; NSW=0.905; rcor=586; rNcor=184; rlogoDP=440; rNsEucl=543; rNSW=585; rank_mean=467.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 266 274 68 10 52 0 0 0 7 9 c 0 0 0 0 0 0 0 0 0 0 14 15 207 6 0 596 0 0 575 6 g 0 0 0 0 0 0 0 0 0 0 170 184 4 494 542 0 596 596 0 517 t 0 0 0 0 0 0 0 0 0 0 147 124 318 87 3 1 1 1 15 65
Rap2.6L_M0036_1.02_CISBP_rc_shift8 (Rap2.6L:M0036_1.02:CISBP_rc)	0.805	0.604	0.894	0.911	0.928	479	331	875	374	315	474.800	; assembly_13 versus Rap2.6L_M0036_1.02_CISBP_rc (Rap2.6L:M0036_1.02:CISBP_rc); m=71/229; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 474.8; --------wtkrCGGCks-- ; cor=0.805; Ncor=0.604; logoDP=0.894; NsEucl=0.911; NSW=0.928; rcor=479; rNcor=331; rlogoDP=875; rNsEucl=374; rNSW=315; rank_mean=474.800; match_rank= a 0 0 0 0 0 0 0 0 31 21 17 29 6 5 5 1 13 20 0 0 c 0 0 0 0 0 0 0 0 19 19 9 12 75 5 14 89 17 27 0 0 g 0 0 0 0 0 0 0 0 21 21 46 41 8 80 77 3 44 35 0 0 t 0 0 0 0 0 0 0 0 29 39 28 18 11 10 4 7 26 18 0 0
ERF8.ampDAP_M0046_AthalianaCistrome_shift5 (ERF8.ampDAP:M0046:AthalianaCistrome)	0.797	0.487	5.079	0.915	0.920	513	766	369	301	426	475.000	; assembly_13 versus ERF8.ampDAP_M0046_AthalianaCistrome (ERF8.ampDAP:M0046:AthalianaCistrome); m=72/229; ncol2=18; w=-4; offset=-4; strand=D; shift=5; score= 475; -----rwwwyGGCGGCGghg ; cor=0.797; Ncor=0.487; logoDP=5.079; NsEucl=0.915; NSW=0.920; rcor=513; rNcor=766; rlogoDP=369; rNsEucl=301; rNSW=426; rank_mean=475.000; match_rank= a 0 0 0 0 0 201 256 257 292 68 19 146 0 0 0 1 3 73 212 144 c 0 0 0 0 0 90 104 34 30 160 0 3 588 0 0 582 0 135 165 37 g 0 0 0 0 0 180 66 102 110 0 499 414 0 585 588 0 517 319 60 279 t 0 0 0 0 0 117 162 195 156 360 70 25 0 3 0 5 68 61 151 128
AT2G33710_M0018_1.02_CISBP_rc_shift9 (AT2G33710:M0018_1.02:CISBP_rc)	0.782	0.711	0.248	0.913	0.924	596	84	1040	325	362	481.400	; assembly_13 versus AT2G33710_M0018_1.02_CISBP_rc (AT2G33710:M0018_1.02:CISBP_rc); m=73/229; ncol2=10; w=0; offset=0; strand=R; shift=9; score= 481.4; ---------tggCGGCgsc- ; cor=0.782; Ncor=0.711; logoDP=0.248; NsEucl=0.913; NSW=0.924; rcor=596; rNcor=84; rlogoDP=1040; rNsEucl=325; rNSW=362; rank_mean=481.400; match_rank= a 0 0 0 0 0 0 0 0 0 15 7 21 3 0 0 7 5 11 18 0 c 0 0 0 0 0 0 0 0 0 24 4 10 90 0 0 92 12 35 39 0 g 0 0 0 0 0 0 0 0 0 13 66 52 3 96 100 0 61 44 24 0 t 0 0 0 0 0 0 0 0 0 48 23 17 4 4 0 1 22 10 19 0
ERF5_MA1225.1_JASPAR_rc_shift9 (ERF5:MA1225.1:JASPAR_rc)	0.801	0.588	1.664	0.914	0.918	497	398	773	315	443	485.200	; assembly_13 versus ERF5_MA1225.1_JASPAR_rc (ERF5:MA1225.1:JASPAR_rc); m=74/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 485.2; ---------yGGCGGCGGcG ; cor=0.801; Ncor=0.588; logoDP=1.664; NsEucl=0.914; NSW=0.918; rcor=497; rNcor=398; rlogoDP=773; rNsEucl=315; rNSW=443; rank_mean=485.200; match_rank= a 0 0 0 0 0 0 0 0 0 106 72 142 42 0 19 9 0 16 129 23 c 0 0 0 0 0 0 0 0 0 219 29 17 465 0 20 503 0 32 370 5 g 0 0 0 0 0 0 0 0 0 17 424 418 0 576 537 0 564 529 0 494 t 0 0 0 0 0 0 0 0 0 238 55 3 73 4 4 68 16 3 81 58
ERF112_MA1002.1_JASPAR_rc_shift9 (ERF112:MA1002.1:JASPAR_rc)	0.781	0.710	0.249	0.913	0.924	608	91	1038	327	367	486.200	; assembly_13 versus ERF112_MA1002.1_JASPAR_rc (ERF112:MA1002.1:JASPAR_rc); m=75/229; ncol2=10; w=0; offset=0; strand=R; shift=9; score= 486.2; ---------tggCGGCgsc- ; cor=0.781; Ncor=0.710; logoDP=0.249; NsEucl=0.913; NSW=0.924; rcor=608; rNcor=91; rlogoDP=1038; rNsEucl=327; rNSW=367; rank_mean=486.200; match_rank= a 0 0 0 0 0 0 0 0 0 150 67 211 33 3 1 72 54 118 180 0 c 0 0 0 0 0 0 0 0 0 240 37 101 903 4 2 913 117 346 392 0 g 0 0 0 0 0 0 0 0 0 133 661 518 28 951 997 1 605 436 240 0 t 0 0 0 0 0 0 0 0 0 478 236 171 36 42 0 15 223 100 189 0
AT5G23930_UN0357.1_JASPAR_rc_shift11 (AT5G23930:UN0357.1:JASPAR_rc)	0.817	0.613	3.827	0.899	0.908	413	298	540	624	556	486.200	; assembly_13 versus AT5G23930_UN0357.1_JASPAR_rc (AT5G23930:UN0357.1:JASPAR_rc); m=76/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 486.2; -----------ryGGCGGCk ; cor=0.817; Ncor=0.613; logoDP=3.827; NsEucl=0.899; NSW=0.908; rcor=413; rNcor=298; rlogoDP=540; rNsEucl=624; rNSW=556; rank_mean=486.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 598 296 0 0 0 0 0 0 125 c 0 0 0 0 0 0 0 0 0 0 0 249 1135 0 0 2074 0 0 2074 91 g 0 0 0 0 0 0 0 0 0 0 0 1036 43 2074 2074 0 2074 2074 0 1323 t 0 0 0 0 0 0 0 0 0 0 0 191 600 0 0 0 0 0 0 535
ERF11_MA1001.1_JASPAR_rc_shift8 (ERF11:MA1001.1:JASPAR_rc)	0.798	0.598	1.012	0.910	0.927	509	357	850	392	332	488.000	; assembly_13 versus ERF11_MA1001.1_JASPAR_rc (ERF11:MA1001.1:JASPAR_rc); m=77/229; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 488; --------wtkrCGGCgs-- ; cor=0.798; Ncor=0.598; logoDP=1.012; NsEucl=0.910; NSW=0.927; rcor=509; rNcor=357; rlogoDP=850; rNsEucl=392; rNSW=332; rank_mean=488.000; match_rank= a 0 0 0 0 0 0 0 0 324 233 175 273 31 99 85 4 169 165 0 0 c 0 0 0 0 0 0 0 0 204 181 77 154 828 51 55 887 123 316 0 0 g 0 0 0 0 0 0 0 0 196 162 490 383 10 704 835 0 494 313 0 0 t 0 0 0 0 0 0 0 0 276 424 258 190 131 145 25 109 213 206 0 0
LEP_MA1246.1_JASPAR_rc_shift1 (LEP:MA1246.1:JASPAR_rc)	0.855	0.448	0.362	0.926	0.939	242	900	973	156	193	492.800	; assembly_13 versus LEP_MA1246.1_JASPAR_rc (LEP:MA1246.1:JASPAR_rc); m=78/229; ncol2=21; w=-8; offset=-8; strand=R; shift=1; score= 492.8; -ggcggydgygrCGGCGGmG ; cor=0.855; Ncor=0.448; logoDP=0.362; NsEucl=0.926; NSW=0.939; rcor=242; rNcor=900; rlogoDP=973; rNsEucl=156; rNSW=193; rank_mean=492.800; match_rank= a 0 100 111 116 80 121 122 127 95 111 90 157 7 1 10 8 0 36 172 32 c 0 44 51 222 48 56 187 41 44 146 22 20 460 0 0 456 0 52 226 9 g 0 278 240 80 254 252 56 189 232 27 303 301 0 489 480 0 488 398 23 413 t 0 68 88 72 108 61 125 133 119 206 75 12 23 0 0 26 2 4 69 36
ERF008_MA0979.1_JASPAR_rc_shift12 (ERF008:MA0979.1:JASPAR_rc)	0.805	0.585	2.207	0.904	0.926	478	408	734	513	337	494.000	; assembly_13 versus ERF008_MA0979.1_JASPAR_rc (ERF008:MA0979.1:JASPAR_rc); m=79/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 494; ------------sGkCGGyG ; cor=0.805; Ncor=0.585; logoDP=2.207; NsEucl=0.904; NSW=0.926; rcor=478; rNcor=408; rlogoDP=734; rNsEucl=513; rNSW=337; rank_mean=494.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 154 34 101 26 8 26 17 41 c 0 0 0 0 0 0 0 0 0 0 0 0 329 68 56 865 19 58 634 24 g 0 0 0 0 0 0 0 0 0 0 0 0 417 828 524 44 934 889 15 787 t 0 0 0 0 0 0 0 0 0 0 0 0 100 70 320 66 39 27 335 148
ERF4.ampDAP_M0033_AthalianaCistrome_shift4 (ERF4.ampDAP:M0033:AthalianaCistrome)	0.803	0.442	5.349	0.914	0.919	489	923	321	310	437	496.000	; assembly_13 versus ERF4.ampDAP_M0033_AthalianaCistrome (ERF4.ampDAP:M0033:AthalianaCistrome); m=80/229; ncol2=20; w=-5; offset=-5; strand=D; shift=4; score= 496; ----rrwwayGRCGGCGgmg ; cor=0.803; Ncor=0.442; logoDP=5.349; NsEucl=0.914; NSW=0.919; rcor=489; rNcor=923; rlogoDP=321; rNsEucl=310; rNSW=437; rank_mean=496.000; match_rank= a 0 0 0 0 149 194 242 246 299 71 20 156 1 0 1 0 0 45 228 135 c 0 0 0 0 92 88 111 28 24 153 1 0 581 0 0 582 0 145 153 39 g 0 0 0 0 233 203 65 110 122 4 516 406 0 582 581 0 538 342 76 309 t 0 0 0 0 108 97 164 198 137 354 45 20 0 0 0 0 44 50 125 99
ERF077_MA1240.2_JASPAR_rc_shift11 (ERF077:MA1240.2:JASPAR_rc)	0.811	0.608	3.365	0.900	0.910	451	311	596	601	527	497.200	; assembly_13 versus ERF077_MA1240.2_JASPAR_rc (ERF077:MA1240.2:JASPAR_rc); m=81/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 497.2; -----------ryGGCGGCG ; cor=0.811; Ncor=0.608; logoDP=3.365; NsEucl=0.900; NSW=0.910; rcor=451; rNcor=311; rlogoDP=596; rNsEucl=601; rNSW=527; rank_mean=497.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 175 53 9 55 0 0 0 85 4 c 0 0 0 0 0 0 0 0 0 0 0 42 323 0 0 544 0 0 448 6 g 0 0 0 0 0 0 0 0 0 0 0 310 0 528 511 0 571 571 0 538 t 0 0 0 0 0 0 0 0 0 0 0 44 195 34 5 27 0 0 38 23
EREB149_B73_1_m1_EEAD0335_EEADannot_shift12 (EREB149_B73_1_m1:EEAD0335:EEADannot)	0.860	0.405	3.207	0.911	0.936	221	1063	620	370	220	498.800	; assembly_13 versus EREB149_B73_1_m1_EEAD0335_EEADannot (EREB149_B73_1_m1:EEAD0335:EEADannot); m=82/229; ncol2=14; w=0; offset=3; strand=D; shift=12; score= 498.8; ------------CGGCGGCG ; cor=0.860; Ncor=0.405; logoDP=3.207; NsEucl=0.911; NSW=0.936; rcor=221; rNcor=1063; rlogoDP=620; rNsEucl=370; rNSW=220; rank_mean=498.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 3 3 14 3 3 15 2 1 c 0 0 0 0 0 0 0 0 0 0 0 0 79 4 2 84 2 4 85 1 g 0 0 0 0 0 0 0 0 0 0 0 0 4 87 81 2 92 79 3 94 t 0 0 0 0 0 0 0 0 0 0 0 0 14 6 3 11 3 2 10 4
ERF11_M0009_1.02_CISBP_rc_shift8 (ERF11:M0009_1.02:CISBP_rc)	0.795	0.596	1.008	0.909	0.926	530	365	851	405	344	499.000	; assembly_13 versus ERF11_M0009_1.02_CISBP_rc (ERF11:M0009_1.02:CISBP_rc); m=83/229; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 499; --------wtkrCGGCgs-- ; cor=0.795; Ncor=0.596; logoDP=1.008; NsEucl=0.909; NSW=0.926; rcor=530; rNcor=365; rlogoDP=851; rNsEucl=405; rNSW=344; rank_mean=499.000; match_rank= a 0 0 0 0 0 0 0 0 32 23 17 27 3 10 9 0 17 17 0 0 c 0 0 0 0 0 0 0 0 20 18 8 15 83 5 6 89 13 31 0 0 g 0 0 0 0 0 0 0 0 20 17 49 38 1 70 83 0 49 31 0 0 t 0 0 0 0 0 0 0 0 28 42 26 20 13 15 2 11 21 21 0 0
CRF3_M0041_1.02_CISBP_rc_shift9 (CRF3:M0041_1.02:CISBP_rc)	0.784	0.642	0.880	0.907	0.922	585	211	879	448	387	502.000	; assembly_13 versus CRF3_M0041_1.02_CISBP_rc (CRF3:M0041_1.02:CISBP_rc); m=84/229; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 502; ---------tggcGGCgs-- ; cor=0.784; Ncor=0.642; logoDP=0.880; NsEucl=0.907; NSW=0.922; rcor=585; rNcor=211; rlogoDP=879; rNsEucl=448; rNSW=387; rank_mean=502.000; match_rank= a 0 0 0 0 0 0 0 0 0 21 19 24 11 7 5 0 14 20 0 0 c 0 0 0 0 0 0 0 0 0 21 13 14 62 6 5 94 16 30 0 0 g 0 0 0 0 0 0 0 0 0 24 46 42 10 78 88 0 48 31 0 0 t 0 0 0 0 0 0 0 0 0 34 22 20 17 9 2 6 22 19 0 0
ERF096_MA0998.2_JASPAR_rc_shift13 (ERF096:MA0998.2:JASPAR_rc)	0.872	0.476	2.450	0.899	0.939	178	799	724	617	200	503.600	; assembly_13 versus ERF096_MA0998.2_JASPAR_rc (ERF096:MA0998.2:JASPAR_rc); m=85/229; ncol2=6; w=0; offset=4; strand=R; shift=13; score= 503.6; -------------GgCGGC- ; cor=0.872; Ncor=0.476; logoDP=2.450; NsEucl=0.899; NSW=0.939; rcor=178; rNcor=799; rlogoDP=724; rNsEucl=617; rNSW=200; rank_mean=503.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 38 149 19 32 27 13 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 24 131 928 21 36 939 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 903 591 10 850 905 13 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 35 129 43 97 32 34 0
ERF13_MA1004.1_JASPAR_rc_shift12 (ERF13:MA1004.1:JASPAR_rc)	0.813	0.592	3.328	0.898	0.916	433	383	601	641	462	504.000	; assembly_13 versus ERF13_MA1004.1_JASPAR_rc (ERF13:MA1004.1:JASPAR_rc); m=86/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 504; ------------yGgCGGCs ; cor=0.813; Ncor=0.592; logoDP=3.328; NsEucl=0.898; NSW=0.916; rcor=433; rNcor=383; rlogoDP=601; rNsEucl=641; rNSW=462; rank_mean=504.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 154 0 113 0 0 0 0 22 c 0 0 0 0 0 0 0 0 0 0 0 0 282 0 145 983 16 32 951 283 g 0 0 0 0 0 0 0 0 0 0 0 0 103 999 645 16 983 951 49 478 t 0 0 0 0 0 0 0 0 0 0 0 0 461 0 97 0 0 16 0 217
ERF073_MA1754.2_JASPAR_rc_shift9 (ERF073:MA1754.2:JASPAR_rc)	0.759	0.759	4.160	0.902	0.894	720	39	496	564	709	505.600	; assembly_13 versus ERF073_MA1754.2_JASPAR_rc (ERF073:MA1754.2:JASPAR_rc); m=87/229; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 505.6; ---------yGGCGGCGGmg ; cor=0.759; Ncor=0.759; logoDP=4.160; NsEucl=0.902; NSW=0.894; rcor=720; rNcor=39; rlogoDP=496; rNsEucl=564; rNSW=709; rank_mean=505.600; match_rank= a 0 0 0 0 0 0 0 0 0 114 55 52 12 0 7 0 0 69 366 142 c 0 0 0 0 0 0 0 0 0 380 14 0 975 0 0 968 0 155 377 28 g 0 0 0 0 0 0 0 0 0 0 837 948 0 1000 993 0 975 742 89 648 t 0 0 0 0 0 0 0 0 0 506 94 0 12 0 0 32 25 34 169 181
ERF105_MA1000.3_JASPAR_shift11 (ERF105:MA1000.3:JASPAR)	0.802	0.602	5.338	0.894	0.898	492	339	326	712	667	507.200	; assembly_13 versus ERF105_MA1000.3_JASPAR (ERF105:MA1000.3:JASPAR); m=88/229; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 507.2; -----------ryGGCGGCG ; cor=0.802; Ncor=0.602; logoDP=5.338; NsEucl=0.894; NSW=0.898; rcor=492; rNcor=339; rlogoDP=326; rNsEucl=712; rNSW=667; rank_mean=507.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 189 50 0 21 1 0 0 21 1 c 0 0 0 0 0 0 0 0 0 0 0 37 307 0 0 569 0 1 544 0 g 0 0 0 0 0 0 0 0 0 0 0 312 0 586 565 0 586 585 0 523 t 0 0 0 0 0 0 0 0 0 0 0 48 229 0 0 16 0 0 21 62
ATERF13_M0020_1.02_CISBP_rc_shift12 (ATERF13:M0020_1.02:CISBP_rc)	0.812	0.590	3.291	0.897	0.916	445	388	609	645	469	511.200	; assembly_13 versus ATERF13_M0020_1.02_CISBP_rc (ATERF13:M0020_1.02:CISBP_rc); m=89/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 511.2; ------------yGgCGGCs ; cor=0.812; Ncor=0.590; logoDP=3.291; NsEucl=0.897; NSW=0.916; rcor=445; rNcor=388; rlogoDP=609; rNsEucl=645; rNSW=469; rank_mean=511.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 15 0 11 0 0 0 0 2 c 0 0 0 0 0 0 0 0 0 0 0 0 28 0 15 98 2 3 95 28 g 0 0 0 0 0 0 0 0 0 0 0 0 10 100 64 2 98 95 5 48 t 0 0 0 0 0 0 0 0 0 0 0 0 47 0 10 0 0 2 0 22
ERF4.DAP_M0047_AthalianaCistrome_rc_shift6 (ERF4.DAP:M0047:AthalianaCistrome_rc)	0.797	0.585	2.562	0.909	0.909	512	412	712	408	534	515.600	; assembly_13 versus ERF4.DAP_M0047_AthalianaCistrome_rc (ERF4.DAP:M0047:AthalianaCistrome_rc); m=90/229; ncol2=15; w=-3; offset=-3; strand=R; shift=6; score= 515.6; ------wdryGGCGGCGGmG ; cor=0.797; Ncor=0.585; logoDP=2.562; NsEucl=0.909; NSW=0.909; rcor=512; rNcor=412; rlogoDP=712; rNsEucl=408; rNSW=534; rank_mean=515.600; match_rank= a 0 0 0 0 0 0 231 216 260 71 12 128 0 1 0 3 2 21 237 90 c 0 0 0 0 0 0 123 26 25 170 2 0 596 0 1 591 0 103 195 21 g 0 0 0 0 0 0 71 153 182 3 531 463 0 595 596 0 583 454 53 407 t 0 0 0 0 0 0 172 202 130 353 52 6 1 1 0 3 12 19 112 79
ERF069_MA0997.1_JASPAR_rc_shift9 (ERF069:MA0997.1:JASPAR_rc)	0.775	0.634	1.117	0.906	0.920	642	228	834	471	420	519.000	; assembly_13 versus ERF069_MA0997.1_JASPAR_rc (ERF069:MA0997.1:JASPAR_rc); m=91/229; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 519; ---------tggCGGCgs-- ; cor=0.775; Ncor=0.634; logoDP=1.117; NsEucl=0.906; NSW=0.920; rcor=642; rNcor=228; rlogoDP=834; rNsEucl=471; rNSW=420; rank_mean=519.000; match_rank= a 0 0 0 0 0 0 0 0 0 209 180 230 0 146 24 0 157 197 0 0 c 0 0 0 0 0 0 0 0 0 231 193 212 820 76 86 982 175 315 0 0 g 0 0 0 0 0 0 0 0 0 209 404 419 0 680 828 0 471 294 0 0 t 0 0 0 0 0 0 0 0 0 351 224 138 179 98 61 18 197 193 0 0
ERF2_MA1262.2_JASPAR_rc_shift11 (ERF2:MA1262.2:JASPAR_rc)	0.842	0.505	1.337	0.908	0.924	293	701	804	425	374	519.400	; assembly_13 versus ERF2_MA1262.2_JASPAR_rc (ERF2:MA1262.2:JASPAR_rc); m=92/229; ncol2=13; w=0; offset=2; strand=R; shift=11; score= 519.4; -----------ryGGCGGCG ; cor=0.842; Ncor=0.505; logoDP=1.337; NsEucl=0.908; NSW=0.924; rcor=293; rNcor=701; rlogoDP=804; rNsEucl=425; rNSW=374; rank_mean=519.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 212 65 0 30 2 0 2 44 17 c 0 0 0 0 0 0 0 0 0 0 0 52 353 0 0 550 0 0 509 9 g 0 0 0 0 0 0 0 0 0 0 0 305 0 595 565 0 588 590 0 451 t 0 0 0 0 0 0 0 0 0 0 0 26 177 0 0 43 7 3 42 118
ERF104.ampDAP_M0130_AthalianaCistrome_shift9 (ERF104.ampDAP:M0130:AthalianaCistrome)	0.768	0.563	5.190	0.906	0.902	677	489	347	468	617	519.600	; assembly_13 versus ERF104.ampDAP_M0130_AthalianaCistrome (ERF104.ampDAP:M0130:AthalianaCistrome); m=93/229; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 519.6; ---------ygryGGCGGCG ; cor=0.768; Ncor=0.563; logoDP=5.190; NsEucl=0.906; NSW=0.902; rcor=677; rNcor=489; rlogoDP=347; rNsEucl=468; rNSW=617; rank_mean=519.600; match_rank= a 0 0 0 0 0 0 0 0 0 58 66 75 29 2 30 0 0 0 1 0 c 0 0 0 0 0 0 0 0 0 94 25 24 134 0 1 282 0 0 278 11 g 0 0 0 0 0 0 0 0 0 27 137 168 1 281 252 0 283 283 0 234 t 0 0 0 0 0 0 0 0 0 104 55 16 119 0 0 1 0 0 4 38
AT1G22985_M0007_1.02_CISBP_rc_shift9 (AT1G22985:M0007_1.02:CISBP_rc)	0.773	0.632	1.119	0.905	0.919	654	233	833	488	431	527.800	; assembly_13 versus AT1G22985_M0007_1.02_CISBP_rc (AT1G22985:M0007_1.02:CISBP_rc); m=94/229; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 527.8; ---------tggCGGCgs-- ; cor=0.773; Ncor=0.632; logoDP=1.119; NsEucl=0.905; NSW=0.919; rcor=654; rNcor=233; rlogoDP=833; rNsEucl=488; rNSW=431; rank_mean=527.800; match_rank= a 0 0 0 0 0 0 0 0 0 21 19 23 0 15 2 0 16 20 0 0 c 0 0 0 0 0 0 0 0 0 23 19 21 82 7 9 98 18 32 0 0 g 0 0 0 0 0 0 0 0 0 21 40 42 0 68 83 0 46 29 0 0 t 0 0 0 0 0 0 0 0 0 35 22 14 18 10 6 2 20 19 0 0
LOB_MA2022.2_JASPAR_rc_shift8 (LOB:MA2022.2:JASPAR_rc)	0.764	0.647	3.226	0.905	0.901	700	199	618	492	637	529.200	; assembly_13 versus LOB_MA2022.2_JASPAR_rc (LOB:MA2022.2:JASPAR_rc); m=95/229; ncol2=13; w=-1; offset=-1; strand=R; shift=8; score= 529.2; --------gckGCGGCGGCG ; cor=0.764; Ncor=0.647; logoDP=3.226; NsEucl=0.905; NSW=0.901; rcor=700; rNcor=199; rlogoDP=618; rNsEucl=492; rNSW=637; rank_mean=529.200; match_rank= a 0 0 0 0 0 0 0 0 113 101 103 50 24 27 16 23 24 18 133 86 c 0 0 0 0 0 0 0 0 71 532 44 38 733 8 7 729 4 10 552 24 g 0 0 0 0 0 0 0 0 538 33 398 693 1 721 768 4 739 760 18 569 t 0 0 0 0 0 0 0 0 73 129 250 14 37 39 4 39 28 7 92 116
Zm00001d005892_MA1819.1_JASPAR_rc_shift10 (Zm00001d005892:MA1819.1:JASPAR_rc)	0.781	0.601	3.117	0.904	0.908	606	346	628	514	557	530.200	; assembly_13 versus Zm00001d005892_MA1819.1_JASPAR_rc (Zm00001d005892:MA1819.1:JASPAR_rc); m=96/229; ncol2=12; w=0; offset=1; strand=R; shift=10; score= 530.2; ----------ggCGGCGGCG ; cor=0.781; Ncor=0.601; logoDP=3.117; NsEucl=0.904; NSW=0.908; rcor=606; rNcor=346; rlogoDP=628; rNsEucl=514; rNSW=557; rank_mean=530.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 3917 4805 990 748 1310 722 670 1200 765 872 c 0 0 0 0 0 0 0 0 0 0 6580 5911 24113 990 1696 25421 917 1794 25046 1309 g 0 0 0 0 0 0 0 0 0 0 13547 12889 1029 25022 23482 435 25251 23527 767 24431 t 0 0 0 0 0 0 0 0 0 0 3329 3768 1241 613 885 795 535 852 795 761
LOC_Os08g36920_M0044_1.02_CISBP_rc_shift9 (LOC_Os08g36920:M0044_1.02:CISBP_rc)	0.754	0.685	0.260	0.911	0.921	753	123	1033	356	402	533.400	; assembly_13 versus LOC_Os08g36920_M0044_1.02_CISBP_rc (LOC_Os08g36920:M0044_1.02:CISBP_rc); m=97/229; ncol2=10; w=0; offset=0; strand=R; shift=9; score= 533.4; ---------tkrCGsCgsv- ; cor=0.754; Ncor=0.685; logoDP=0.260; NsEucl=0.911; NSW=0.921; rcor=753; rNcor=123; rlogoDP=1033; rNsEucl=356; rNSW=402; rank_mean=533.400; match_rank= a 0 0 0 0 0 0 0 0 0 23 22 30 0 0 3 4 19 24 27 0 c 0 0 0 0 0 0 0 0 0 23 16 0 100 0 31 79 24 25 25 0 g 0 0 0 0 0 0 0 0 0 19 32 49 0 100 64 0 34 32 25 0 t 0 0 0 0 0 0 0 0 0 35 30 21 0 0 2 17 23 19 23 0
WIN1_MA1804.2_JASPAR_rc_shift14 (WIN1:MA1804.2:JASPAR_rc)	0.855	0.466	0.265	0.907	0.949	241	837	1028	440	136	536.400	; assembly_13 versus WIN1_MA1804.2_JASPAR_rc (WIN1:MA1804.2:JASPAR_rc); m=98/229; ncol2=6; w=0; offset=5; strand=R; shift=14; score= 536.4; --------------gCGGyG ; cor=0.855; Ncor=0.466; logoDP=0.265; NsEucl=0.907; NSW=0.949; rcor=241; rNcor=837; rlogoDP=1028; rNsEucl=440; rNSW=136; rank_mean=536.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 78 77 43 17 1 10 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 79 712 1 187 615 133 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 679 9 956 795 1 720 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 164 202 1 1 384 137
ERF8_MA0994.1_JASPAR_rc_shift7 (ERF8:MA0994.1:JASPAR_rc)	0.826	0.508	0.194	0.911	0.936	361	691	1062	373	222	541.800	; assembly_13 versus ERF8_MA0994.1_JASPAR_rc (ERF8:MA0994.1:JASPAR_rc); m=99/229; ncol2=10; w=-2; offset=-2; strand=R; shift=7; score= 541.8; -------wwtggCGGCg--- ; cor=0.826; Ncor=0.508; logoDP=0.194; NsEucl=0.911; NSW=0.936; rcor=361; rNcor=691; rlogoDP=1062; rNsEucl=373; rNSW=222; rank_mean=541.800; match_rank= a 0 0 0 0 0 0 0 311 336 192 139 243 31 48 19 3 129 0 0 0 c 0 0 0 0 0 0 0 192 185 184 58 151 841 31 64 959 97 0 0 0 g 0 0 0 0 0 0 0 206 206 175 605 452 53 807 908 0 572 0 0 0 t 0 0 0 0 0 0 0 290 273 449 197 154 75 114 9 38 202 0 0 0
0100010458_M0076_1.02_CISBP_rc_shift12 (0100010458:M0076_1.02:CISBP_rc)	0.807	0.587	3.751	0.892	0.907	466	401	554	737	560	543.600	; assembly_13 versus 0100010458_M0076_1.02_CISBP_rc (0100010458:M0076_1.02:CISBP_rc); m=100/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 543.6; ------------yGGCGGCg ; cor=0.807; Ncor=0.587; logoDP=3.751; NsEucl=0.892; NSW=0.907; rcor=466; rNcor=401; rlogoDP=554; rNsEucl=737; rNSW=560; rank_mean=543.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 7 0 6 0 0 0 0 8 c 0 0 0 0 0 0 0 0 0 0 0 0 32 0 21 100 2 8 100 14 g 0 0 0 0 0 0 0 0 0 0 0 0 3 100 71 0 98 92 0 60 t 0 0 0 0 0 0 0 0 0 0 0 0 58 0 2 0 0 0 0 18
ERF1B_MA0567.1_JASPAR_rc_shift12 (ERF1B:MA0567.1:JASPAR_rc)	0.814	0.592	3.314	0.892	0.906	429	377	602	749	575	546.400	; assembly_13 versus ERF1B_MA0567.1_JASPAR_rc (ERF1B:MA0567.1:JASPAR_rc); m=101/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 546.4; ------------tGGCGGCk ; cor=0.814; Ncor=0.592; logoDP=3.314; NsEucl=0.892; NSW=0.906; rcor=429; rNcor=377; rlogoDP=602; rNsEucl=749; rNSW=575; rank_mean=546.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 12 1 4 1 0 1 1 1 c 0 0 0 0 0 0 0 0 0 0 0 0 24 1 2 97 0 1 98 3 g 0 0 0 0 0 0 0 0 0 0 0 0 5 98 92 0 96 98 1 54 t 0 0 0 0 0 0 0 0 0 0 0 0 58 1 2 2 4 0 1 42
EREB2_B73_1_m1_EEAD0345_EEADannot_rc_shift9 (EREB2_B73_1_m1:EEAD0345:EEADannot_rc)	0.746	0.746	3.727	0.900	0.891	792	47	556	590	748	546.600	; assembly_13 versus EREB2_B73_1_m1_EEAD0345_EEADannot_rc (EREB2_B73_1_m1:EEAD0345:EEADannot_rc); m=102/229; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 546.6; ---------cGRCGGCGGCG ; cor=0.746; Ncor=0.746; logoDP=3.727; NsEucl=0.900; NSW=0.891; rcor=792; rNcor=47; rlogoDP=556; rNsEucl=590; rNSW=748; rank_mean=546.600; match_rank= a 0 0 0 0 0 0 0 0 0 6 7 26 6 0 12 0 0 12 6 7 c 0 0 0 0 0 0 0 0 0 65 4 0 83 0 3 96 0 4 80 2 g 0 0 0 0 0 0 0 0 0 12 87 70 1 100 77 0 100 78 6 88 t 0 0 0 0 0 0 0 0 0 17 2 4 10 0 8 4 0 6 8 3
ATERF-8_M0012_1.02_CISBP_rc_shift7 (ATERF-8:M0012_1.02:CISBP_rc)	0.825	0.508	0.198	0.910	0.936	370	695	1060	381	230	547.200	; assembly_13 versus ATERF-8_M0012_1.02_CISBP_rc (ATERF-8:M0012_1.02:CISBP_rc); m=103/229; ncol2=10; w=-2; offset=-2; strand=R; shift=7; score= 547.2; -------wwtggCGGCg--- ; cor=0.825; Ncor=0.508; logoDP=0.198; NsEucl=0.910; NSW=0.936; rcor=370; rNcor=695; rlogoDP=1060; rNsEucl=381; rNSW=230; rank_mean=547.200; match_rank= a 0 0 0 0 0 0 0 31 34 19 14 24 3 5 2 0 13 0 0 0 c 0 0 0 0 0 0 0 19 18 18 6 15 85 3 6 96 10 0 0 0 g 0 0 0 0 0 0 0 21 21 18 60 46 5 81 91 0 57 0 0 0 t 0 0 0 0 0 0 0 29 27 45 20 15 7 11 1 4 20 0 0 0
ERF2_MA1262.1_JASPAR_rc_shift9 (ERF2:MA1262.1:JASPAR_rc)	0.834	0.437	0.264	0.922	0.933	331	936	1030	196	255	549.600	; assembly_13 versus ERF2_MA1262.1_JASPAR_rc (ERF2:MA1262.1:JASPAR_rc); m=104/229; ncol2=21; w=0; offset=0; strand=R; shift=9; score= 549.6; ---------ygryGGCGGCG ; cor=0.834; Ncor=0.437; logoDP=0.264; NsEucl=0.922; NSW=0.933; rcor=331; rNcor=936; rlogoDP=1030; rNsEucl=196; rNSW=255; rank_mean=549.600; match_rank= a 0 0 0 0 0 0 0 0 0 136 144 212 65 0 30 2 0 2 44 17 c 0 0 0 0 0 0 0 0 0 212 78 52 353 0 0 550 0 0 509 9 g 0 0 0 0 0 0 0 0 0 29 251 305 0 595 565 0 588 590 0 451 t 0 0 0 0 0 0 0 0 0 218 122 26 177 0 0 43 7 3 42 118
RAP211_MA1266.1_JASPAR_rc_shift9 (RAP211:MA1266.1:JASPAR_rc)	0.772	0.566	0.969	0.913	0.917	655	474	862	319	447	551.400	; assembly_13 versus RAP211_MA1266.1_JASPAR_rc (RAP211:MA1266.1:JASPAR_rc); m=105/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 551.4; ---------mGmCGGCgrhg ; cor=0.772; Ncor=0.566; logoDP=0.969; NsEucl=0.913; NSW=0.917; rcor=655; rNcor=474; rlogoDP=862; rNsEucl=319; rNSW=447; rank_mean=551.400; match_rank= a 0 0 0 0 0 0 0 0 0 161 28 147 0 0 0 24 83 208 163 119 c 0 0 0 0 0 0 0 0 0 193 0 329 588 0 0 539 71 42 220 41 g 0 0 0 0 0 0 0 0 0 132 560 112 0 588 588 0 373 323 42 342 t 0 0 0 0 0 0 0 0 0 102 0 0 0 0 0 25 61 15 163 86
EREB29_B73_1_m1_EEAD0343_EEADannot_rc_shift9 (EREB29_B73_1_m1:EEAD0343:EEADannot_rc)	0.749	0.749	3.567	0.900	0.889	775	44	575	604	766	552.800	; assembly_13 versus EREB29_B73_1_m1_EEAD0343_EEADannot_rc (EREB29_B73_1_m1:EEAD0343:EEADannot_rc); m=106/229; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 552.8; ---------cGrCGGCGGCG ; cor=0.749; Ncor=0.749; logoDP=3.567; NsEucl=0.900; NSW=0.889; rcor=775; rNcor=44; rlogoDP=575; rNsEucl=604; rNSW=766; rank_mean=552.800; match_rank= a 0 0 0 0 0 0 0 0 0 8 4 27 4 2 13 0 1 14 4 7 c 0 0 0 0 0 0 0 0 0 64 6 3 85 0 0 94 0 3 82 0 g 0 0 0 0 0 0 0 0 0 13 87 66 1 98 83 0 99 82 6 93 t 0 0 0 0 0 0 0 0 0 15 3 4 10 0 4 6 0 1 8 0
ERF9.ampDAP_M0096_AthalianaCistrome_rc_shift5 (ERF9.ampDAP:M0096:AthalianaCistrome_rc)	0.795	0.514	2.500	0.911	0.912	526	665	717	376	501	557.000	; assembly_13 versus ERF9.ampDAP_M0096_AthalianaCistrome_rc (ERF9.ampDAP:M0096:AthalianaCistrome_rc); m=107/229; ncol2=17; w=-4; offset=-4; strand=R; shift=5; score= 557; -----rwwatGGCGGCGgmg ; cor=0.795; Ncor=0.514; logoDP=2.500; NsEucl=0.911; NSW=0.912; rcor=526; rNcor=665; rlogoDP=717; rNsEucl=376; rNSW=501; rank_mean=557.000; match_rank= a 0 0 0 0 0 212 256 274 304 85 7 140 0 0 0 0 0 27 214 126 c 0 0 0 0 0 74 92 23 20 107 0 0 572 0 0 571 4 141 184 32 g 0 0 0 0 0 203 70 86 112 1 523 420 0 572 572 0 537 375 57 316 t 0 0 0 0 0 83 154 189 136 379 42 12 0 0 0 1 31 29 117 98
ERF15_MA1231.2_JASPAR_rc_shift10 (ERF15:MA1231.2:JASPAR_rc)	0.815	0.543	0.174	0.912	0.922	420	560	1069	351	395	559.000	; assembly_13 versus ERF15_MA1231.2_JASPAR_rc (ERF15:MA1231.2:JASPAR_rc); m=108/229; ncol2=14; w=0; offset=1; strand=R; shift=10; score= 559; ----------rrhGGCGGCk ; cor=0.815; Ncor=0.543; logoDP=0.174; NsEucl=0.912; NSW=0.922; rcor=420; rNcor=560; rlogoDP=1069; rNsEucl=351; rNSW=395; rank_mean=559.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 581 754 581 8 39 12 9 5 18 87 c 0 0 0 0 0 0 0 0 0 0 348 236 911 8 14 2067 3 1 2078 94 g 0 0 0 0 0 0 0 0 0 0 695 929 62 2107 2066 3 2062 2124 7 942 t 0 0 0 0 0 0 0 0 0 0 509 214 579 10 14 51 59 3 30 1010
AT3G10030.ampDAP_M0779_AthalianaCistrome_shift6 (AT3G10030.ampDAP:M0779:AthalianaCistrome)	0.759	0.556	3.800	0.907	0.906	721	516	547	439	580	560.600	; assembly_13 versus AT3G10030.ampDAP_M0779_AthalianaCistrome (AT3G10030.ampDAP:M0779:AthalianaCistrome); m=109/229; ncol2=15; w=-3; offset=-3; strand=D; shift=6; score= 560.6; ------arTTAACGGcgktw ; cor=0.759; Ncor=0.556; logoDP=3.800; NsEucl=0.907; NSW=0.906; rcor=721; rNcor=516; rlogoDP=547; rNsEucl=439; rNSW=580; rank_mean=560.600; match_rank= a 0 0 0 0 0 0 277 159 53 6 533 596 0 32 45 112 68 92 63 270 c 0 0 0 0 0 0 147 62 58 0 3 0 597 4 30 392 42 27 122 21 g 0 0 0 0 0 0 41 241 57 0 58 1 0 559 477 5 391 167 28 92 t 0 0 0 0 0 0 132 135 429 591 3 0 0 2 45 88 96 311 384 214
PK19363.1_M0004_1.02_CISBP_rc_shift9 (PK19363.1:M0004_1.02:CISBP_rc)	0.793	0.577	2.578	0.895	0.912	535	435	708	684	498	572.000	; assembly_13 versus PK19363.1_M0004_1.02_CISBP_rc (PK19363.1:M0004_1.02:CISBP_rc); m=110/229; ncol2=8; w=0; offset=0; strand=R; shift=9; score= 572; ---------yGgCGGCG--- ; cor=0.793; Ncor=0.577; logoDP=2.578; NsEucl=0.895; NSW=0.912; rcor=535; rNcor=435; rlogoDP=708; rNsEucl=684; rNSW=498; rank_mean=572.000; match_rank= a 0 0 0 0 0 0 0 0 0 14 6 18 0 0 0 1 5 0 0 0 c 0 0 0 0 0 0 0 0 0 30 1 14 99 1 11 95 8 0 0 0 g 0 0 0 0 0 0 0 0 0 7 77 63 1 97 87 1 72 0 0 0 t 0 0 0 0 0 0 0 0 0 49 16 5 0 2 2 3 15 0 0 0
EREB29_Mo17_1_EEAD0344_EEADannot_shift9 (EREB29_Mo17_1:EEAD0344:EEADannot)	0.736	0.736	4.929	0.895	0.878	850	58	401	703	863	575.000	; assembly_13 versus EREB29_Mo17_1_EEAD0344_EEADannot (EREB29_Mo17_1:EEAD0344:EEADannot); m=111/229; ncol2=11; w=0; offset=0; strand=D; shift=9; score= 575; ---------cGGCGGCGGCG ; cor=0.736; Ncor=0.736; logoDP=4.929; NsEucl=0.895; NSW=0.878; rcor=850; rNcor=58; rlogoDP=401; rNsEucl=703; rNSW=863; rank_mean=575.000; match_rank= a 0 0 0 0 0 0 0 0 0 10 4 19 4 0 11 2 0 3 9 7 c 0 0 0 0 0 0 0 0 0 65 1 0 85 0 0 96 0 8 80 2 g 0 0 0 0 0 0 0 0 0 7 94 78 0 99 87 0 99 86 5 88 t 0 0 0 0 0 0 0 0 0 18 1 3 11 1 2 2 1 3 6 3
RAP212_MA1256.1_JASPAR_shift3 (RAP212:MA1256.1:JASPAR)	0.785	0.411	4.591	0.911	0.914	577	1035	439	353	489	578.600	; assembly_13 versus RAP212_MA1256.1_JASPAR (RAP212:MA1256.1:JASPAR); m=112/229; ncol2=21; w=-6; offset=-6; strand=D; shift=3; score= 578.6; ---cgghgrwrryGGCGGCG ; cor=0.785; Ncor=0.411; logoDP=4.591; NsEucl=0.911; NSW=0.914; rcor=577; rNcor=1035; rlogoDP=439; rNsEucl=353; rNSW=489; rank_mean=578.600; match_rank= a 0 0 0 127 133 140 159 133 191 244 266 274 68 10 52 0 0 0 7 9 c 0 0 0 224 64 86 192 83 72 131 14 15 207 6 0 596 0 0 575 6 g 0 0 0 119 286 276 90 250 250 52 170 184 4 494 542 0 596 596 0 517 t 0 0 0 127 114 95 156 131 84 170 147 124 318 87 3 1 1 1 15 65
GRF4_EEAD0016_EEADannot_rc_shift9 (GRF4:EEAD0016:EEADannot_rc)	0.739	0.677	2.716	0.902	0.895	820	135	692	553	696	579.200	; assembly_13 versus GRF4_EEAD0016_EEADannot_rc (GRF4:EEAD0016:EEADannot_rc); m=113/229; ncol2=12; w=0; offset=0; strand=R; shift=9; score= 579.2; ---------cgGCGGCGGCg ; cor=0.739; Ncor=0.677; logoDP=2.716; NsEucl=0.902; NSW=0.895; rcor=820; rNcor=135; rlogoDP=692; rNsEucl=553; rNSW=696; rank_mean=579.200; match_rank= a 0 0 0 0 0 0 0 0 0 111 113 32 33 28 17 19 33 24 24 111 c 0 0 0 0 0 0 0 0 0 441 159 38 722 32 21 741 28 35 704 137 g 0 0 0 0 0 0 0 0 0 147 447 697 15 715 738 13 707 723 32 463 t 0 0 0 0 0 0 0 0 0 97 77 29 26 21 20 23 28 14 36 85
RAP2-11_MA1266.2_JASPAR_rc_shift10 (RAP2-11:MA1266.2:JASPAR_rc)	0.775	0.646	0.201	0.906	0.911	644	204	1059	478	518	580.600	; assembly_13 versus RAP2-11_MA1266.2_JASPAR_rc (RAP2-11:MA1266.2:JASPAR_rc); m=114/229; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 580.6; ----------GmCGGCgrhg ; cor=0.775; Ncor=0.646; logoDP=0.201; NsEucl=0.906; NSW=0.911; rcor=644; rNcor=204; rlogoDP=1059; rNsEucl=478; rNSW=518; rank_mean=580.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 28 147 0 0 0 24 83 208 163 119 c 0 0 0 0 0 0 0 0 0 0 0 329 588 0 0 539 71 42 220 41 g 0 0 0 0 0 0 0 0 0 0 560 112 0 588 588 0 373 323 42 342 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 61 15 163 86
AT1G71450.ampDAP_M0064_AthalianaCistrome_rc_shift8 (AT1G71450.ampDAP:M0064:AthalianaCistrome_rc)	0.722	0.611	2.712	0.907	0.906	926	302	694	441	584	589.400	; assembly_13 versus AT1G71450.ampDAP_M0064_AthalianaCistrome_rc (AT1G71450.ampDAP:M0064:AthalianaCistrome_rc); m=115/229; ncol2=13; w=-1; offset=-1; strand=R; shift=8; score= 589.4; --------dyGwCGGyGrhg ; cor=0.722; Ncor=0.611; logoDP=2.712; NsEucl=0.907; NSW=0.906; rcor=926; rNcor=302; rlogoDP=694; rNsEucl=441; rNSW=584; rank_mean=589.400; match_rank= a 0 0 0 0 0 0 0 0 174 91 30 245 0 0 0 51 73 198 167 129 c 0 0 0 0 0 0 0 0 41 153 0 11 539 0 0 164 0 70 154 26 g 0 0 0 0 0 0 0 0 191 27 525 121 0 557 557 0 441 206 70 283 t 0 0 0 0 0 0 0 0 151 286 2 180 18 0 0 342 43 83 166 119
ATERF-1_M0028_1.02_CISBP_rc_shift9 (ATERF-1:M0028_1.02:CISBP_rc)	0.755	0.618	0.771	0.902	0.914	740	280	892	551	486	589.800	; assembly_13 versus ATERF-1_M0028_1.02_CISBP_rc (ATERF-1:M0028_1.02:CISBP_rc); m=116/229; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 589.8; ---------kGrcGGCks-- ; cor=0.755; Ncor=0.618; logoDP=0.771; NsEucl=0.902; NSW=0.914; rcor=740; rNcor=280; rlogoDP=892; rNsEucl=551; rNSW=486; rank_mean=589.800; match_rank= a 0 0 0 0 0 0 0 0 0 23 12 28 8 6 6 0 12 20 0 0 c 0 0 0 0 0 0 0 0 0 14 7 13 62 3 5 95 11 26 0 0 g 0 0 0 0 0 0 0 0 0 32 68 35 9 78 83 0 47 32 0 0 t 0 0 0 0 0 0 0 0 0 31 13 24 21 13 6 5 30 22 0 0
RAP2-10_MA0980.1_JASPAR_rc_shift13 (RAP2-10:MA0980.1:JASPAR_rc)	0.859	0.501	0.612	0.895	0.922	229	712	920	701	388	590.000	; assembly_13 versus RAP2-10_MA0980.1_JASPAR_rc (RAP2-10:MA0980.1:JASPAR_rc); m=117/229; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 590; -------------GGCGGCG ; cor=0.859; Ncor=0.501; logoDP=0.612; NsEucl=0.895; NSW=0.922; rcor=229; rNcor=712; rlogoDP=920; rNsEucl=701; rNSW=388; rank_mean=590.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 92 69 32 6 4 7 22 c 0 0 0 0 0 0 0 0 0 0 0 0 0 16 85 952 9 78 872 14 g 0 0 0 0 0 0 0 0 0 0 0 0 0 859 838 7 981 912 5 942 t 0 0 0 0 0 0 0 0 0 0 0 0 0 33 8 9 4 6 117 22
ATERF-7_M0023_1.02_CISBP_rc_shift7 (ATERF-7:M0023_1.02:CISBP_rc)	0.807	0.497	0.220	0.907	0.931	465	724	1050	447	280	593.200	; assembly_13 versus ATERF-7_M0023_1.02_CISBP_rc (ATERF-7:M0023_1.02:CISBP_rc); m=118/229; ncol2=10; w=-2; offset=-2; strand=R; shift=7; score= 593.2; -------wwtgrCGGCk--- ; cor=0.807; Ncor=0.497; logoDP=0.220; NsEucl=0.907; NSW=0.931; rcor=465; rNcor=724; rlogoDP=1050; rNsEucl=447; rNSW=280; rank_mean=593.200; match_rank= a 0 0 0 0 0 0 0 31 32 20 13 27 1 6 0 4 16 0 0 0 c 0 0 0 0 0 0 0 20 20 21 7 13 88 4 8 87 14 0 0 0 g 0 0 0 0 0 0 0 21 20 17 59 45 2 77 87 1 44 0 0 0 t 0 0 0 0 0 0 0 28 28 42 21 15 9 13 5 8 26 0 0 0
AT3G11100_UN0353.2_JASPAR_shift11 (AT3G11100:UN0353.2:JASPAR)	0.819	0.521	4.466	0.882	0.903	403	635	453	868	609	593.600	; assembly_13 versus AT3G11100_UN0353.2_JASPAR (AT3G11100:UN0353.2:JASPAR); m=119/229; ncol2=7; w=0; offset=2; strand=D; shift=11; score= 593.6; -----------mCGGCGA-- ; cor=0.819; Ncor=0.521; logoDP=4.466; NsEucl=0.882; NSW=0.903; rcor=403; rNcor=635; rlogoDP=453; rNsEucl=868; rNSW=609; rank_mean=593.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 1432 16 24 57 102 73 2127 0 0 c 0 0 0 0 0 0 0 0 0 0 0 652 2413 13 26 2298 55 58 0 0 g 0 0 0 0 0 0 0 0 0 0 0 254 6 2445 2394 12 2311 198 0 0 t 0 0 0 0 0 0 0 0 0 0 0 158 61 14 19 84 57 113 0 0
ERF057_MA1753.1_JASPAR_rc_shift9 (ERF057:MA1753.1:JASPAR_rc)	0.767	0.563	1.164	0.908	0.908	682	492	826	418	554	594.400	; assembly_13 versus ERF057_MA1753.1_JASPAR_rc (ERF057:MA1753.1:JASPAR_rc); m=120/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 594.4; ---------tGGCGGyGGhG ; cor=0.767; Ncor=0.563; logoDP=1.164; NsEucl=0.908; NSW=0.908; rcor=682; rNcor=492; rlogoDP=826; rNsEucl=418; rNSW=554; rank_mean=594.400; match_rank= a 0 0 0 0 0 0 0 0 0 199 91.696 171.28 32.872 0 0 10.381 3.46 58.824 337.37 93.426 c 0 0 0 0 0 0 0 0 0 189 0 12.111 874 0 0 578 12.111 44.983 389 31.142 g 0 0 0 0 0 0 0 0 0 130 856 694 3.46 1000 994.81 1.73 983 862 3.46 803 t 0 0 0 0 0 0 0 0 0 483 51.903 123 89.965 0 5.19 410 1.73 34.602 270 72.664
At5g65130.DAP_M0090_AthalianaCistrome_rc_shift9 (At5g65130.DAP:M0090:AthalianaCistrome_rc)	0.767	0.563	1.164	0.908	0.908	683	493	827	419	555	595.400	; assembly_13 versus At5g65130.DAP_M0090_AthalianaCistrome_rc (At5g65130.DAP:M0090:AthalianaCistrome_rc); m=121/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 595.4; ---------tGGCGGyGGhG ; cor=0.767; Ncor=0.563; logoDP=1.164; NsEucl=0.908; NSW=0.908; rcor=683; rNcor=493; rlogoDP=827; rNsEucl=419; rNSW=555; rank_mean=595.400; match_rank= a 0 0 0 0 0 0 0 0 0 115 53 99 19 0 0 6 2 34 195 54 c 0 0 0 0 0 0 0 0 0 109 0 7 505 0 0 334 7 26 225 18 g 0 0 0 0 0 0 0 0 0 75 495 401 2 578 575 1 568 498 2 464 t 0 0 0 0 0 0 0 0 0 279 30 71 52 0 3 237 1 20 156 42
ERF095_MA1264.2_JASPAR_shift8 (ERF095:MA1264.2:JASPAR)	0.732	0.620	4.703	0.898	0.886	871	276	426	632	790	599.000	; assembly_13 versus ERF095_MA1264.2_JASPAR (ERF095:MA1264.2:JASPAR); m=122/229; ncol2=13; w=-1; offset=-1; strand=D; shift=8; score= 599; --------ryGGCGGCGGmG ; cor=0.732; Ncor=0.620; logoDP=4.703; NsEucl=0.898; NSW=0.886; rcor=871; rNcor=276; rlogoDP=426; rNsEucl=632; rNSW=790; rank_mean=599.000; match_rank= a 0 0 0 0 0 0 0 0 189 78 4 55 3 0 0 13 5 76 191 90 c 0 0 0 0 0 0 0 0 45 335 0 2 570 0 4 525 6 85 231 25 g 0 0 0 0 0 0 0 0 327 2 587 534 0 591 587 0 503 423 43 402 t 0 0 0 0 0 0 0 0 30 176 0 0 18 0 0 53 77 7 126 74
ERF091_MA1228.2_JASPAR_shift8 (ERF091:MA1228.2:JASPAR)	0.733	0.620	4.956	0.897	0.884	867	275	397	650	813	600.400	; assembly_13 versus ERF091_MA1228.2_JASPAR (ERF091:MA1228.2:JASPAR); m=123/229; ncol2=13; w=-1; offset=-1; strand=D; shift=8; score= 600.4; --------ryGGCGGCGGmg ; cor=0.733; Ncor=0.620; logoDP=4.956; NsEucl=0.897; NSW=0.884; rcor=867; rNcor=275; rlogoDP=397; rNsEucl=650; rNSW=813; rank_mean=600.400; match_rank= a 0 0 0 0 0 0 0 0 187 78 0 34 0 0 0 13 6 85 179 91 c 0 0 0 0 0 0 0 0 52 289 0 0 526 0 0 505 7 69 205 25 g 0 0 0 0 0 0 0 0 263 0 534 503 0 537 537 0 472 378 32 337 t 0 0 0 0 0 0 0 0 35 170 3 0 11 0 0 19 52 5 121 84
ERF7_MA0993.1_JASPAR_rc_shift7 (ERF7:MA0993.1:JASPAR_rc)	0.805	0.495	0.219	0.907	0.930	477	728	1052	459	295	602.200	; assembly_13 versus ERF7_MA0993.1_JASPAR_rc (ERF7:MA0993.1:JASPAR_rc); m=124/229; ncol2=10; w=-2; offset=-2; strand=R; shift=7; score= 602.2; -------wwtgrCGGCk--- ; cor=0.805; Ncor=0.495; logoDP=0.219; NsEucl=0.907; NSW=0.930; rcor=477; rNcor=728; rlogoDP=1052; rNsEucl=459; rNSW=295; rank_mean=602.200; match_rank= a 0 0 0 0 0 0 0 312 317 198 128 266 10 65 0 35 156 0 0 0 c 0 0 0 0 0 0 0 201 198 210 66 132 875 36 84 874 140 0 0 0 g 0 0 0 0 0 0 0 209 208 174 593 456 25 770 868 14 442 0 0 0 t 0 0 0 0 0 0 0 279 276 419 212 146 90 129 48 77 263 0 0 0
WIN1_M0006_1.02_CISBP_rc_shift11 (WIN1:M0006_1.02:CISBP_rc)	0.753	0.565	2.059	0.902	0.914	757	481	740	557	490	605.000	; assembly_13 versus WIN1_M0006_1.02_CISBP_rc (WIN1:M0006_1.02:CISBP_rc); m=125/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 605; -----------aykGCGGyG ; cor=0.753; Ncor=0.565; logoDP=2.059; NsEucl=0.902; NSW=0.914; rcor=757; rNcor=481; rlogoDP=740; rNsEucl=557; rNSW=490; rank_mean=605.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 41 16 14 8 8 4 1 1 1 c 0 0 0 0 0 0 0 0 0 0 0 17 43 16 8 71 0 19 61 13 g 0 0 0 0 0 0 0 0 0 0 0 24 16 35 68 1 96 80 0 72 t 0 0 0 0 0 0 0 0 0 0 0 18 25 35 16 20 0 0 38 14
RAP2.6_RAP2.6_ArabidopsisPBM_rc_shift12 (RAP2.6:RAP2.6:ArabidopsisPBM_rc)	0.843	0.519	0.621	0.894	0.911	288	646	915	707	514	614.000	; assembly_13 versus RAP2.6_RAP2.6_ArabidopsisPBM_rc (RAP2.6:RAP2.6:ArabidopsisPBM_rc); m=126/229; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 614; ------------yGGCGGCG ; cor=0.843; Ncor=0.519; logoDP=0.621; NsEucl=0.894; NSW=0.911; rcor=288; rNcor=646; rlogoDP=915; rNsEucl=707; rNSW=514; rank_mean=614.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 6 1 2 0 0 0 0 1 c 0 0 0 0 0 0 0 0 0 0 0 0 61 0 1 100 0 10 99 1 g 0 0 0 0 0 0 0 0 0 0 0 0 3 92 95 0 98 90 0 95 t 0 0 0 0 0 0 0 0 0 0 0 0 30 7 2 0 2 0 1 3
WIN1_MA1804.1_JASPAR_rc_shift11 (WIN1:MA1804.1:JASPAR_rc)	0.750	0.563	2.064	0.901	0.913	772	497	739	566	497	614.200	; assembly_13 versus WIN1_MA1804.1_JASPAR_rc (WIN1:MA1804.1:JASPAR_rc); m=127/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 614.2; -----------aykgCGGyG ; cor=0.750; Ncor=0.563; logoDP=2.064; NsEucl=0.901; NSW=0.913; rcor=772; rNcor=497; rlogoDP=739; rNsEucl=566; rNSW=497; rank_mean=614.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 406 158 145 78 77 43 17 0.58 9.58 c 0 0 0 0 0 0 0 0 0 0 0 172 426 155 79 712 0.69 187 615 133 g 0 0 0 0 0 0 0 0 0 0 0 239 163 352 679 9.19 956 795 0.68 720 t 0 0 0 0 0 0 0 0 0 0 0 184.07 253 348.47 164 202 1.12 1.03 384 137
DEAR3_DEAR3_ArabidopsisPBM_rc_shift11 (DEAR3:DEAR3:ArabidopsisPBM_rc)	0.755	0.566	2.205	0.900	0.910	743	476	735	600	526	616.000	; assembly_13 versus DEAR3_DEAR3_ArabidopsisPBM_rc (DEAR3:DEAR3:ArabidopsisPBM_rc); m=128/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 616; -----------wsGkCGGyG ; cor=0.755; Ncor=0.566; logoDP=2.205; NsEucl=0.900; NSW=0.910; rcor=743; rNcor=476; rlogoDP=735; rNsEucl=600; rNSW=526; rank_mean=616.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 30 15 3 10 3 1 2 2 4 c 0 0 0 0 0 0 0 0 0 0 0 15 33 7 6 86 2 6 64 2 g 0 0 0 0 0 0 0 0 0 0 0 23 42 83 52 4 93 89 1 79 t 0 0 0 0 0 0 0 0 0 0 0 32 10 7 32 7 4 3 33 15
Os05g0497200_MA1034.1_JASPAR_rc_shift12 (Os05g0497200:MA1034.1:JASPAR_rc)	0.795	0.578	4.435	0.881	0.887	527	431	458	886	788	618.000	; assembly_13 versus Os05g0497200_MA1034.1_JASPAR_rc (Os05g0497200:MA1034.1:JASPAR_rc); m=129/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 618; ------------yGGCGsCG ; cor=0.795; Ncor=0.578; logoDP=4.435; NsEucl=0.881; NSW=0.887; rcor=527; rNcor=431; rlogoDP=458; rNsEucl=886; rNSW=788; rank_mean=618.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 5 3 3 3 3 3 3 3 c 0 0 0 0 0 0 0 0 0 0 0 0 495 3 3 990 3 332 990 3 g 0 0 0 0 0 0 0 0 0 0 0 0 5 990 990 3 990 661 3 990 t 0 0 0 0 0 0 0 0 0 0 0 0 495 3 3 3 3 3 3 3
LOC_Os05g41760_M0043_1.02_CISBP_rc_shift12 (LOC_Os05g41760:M0043_1.02:CISBP_rc)	0.795	0.578	4.553	0.880	0.885	528	432	447	893	802	620.400	; assembly_13 versus LOC_Os05g41760_M0043_1.02_CISBP_rc (LOC_Os05g41760:M0043_1.02:CISBP_rc); m=130/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 620.4; ------------yGGCGsCG ; cor=0.795; Ncor=0.578; logoDP=4.553; NsEucl=0.880; NSW=0.885; rcor=528; rNcor=432; rlogoDP=447; rNsEucl=893; rNSW=802; rank_mean=620.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 50 0 0 99 0 34 99 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 100 99 0 100 66 0 100 t 0 0 0 0 0 0 0 0 0 0 0 0 50 0 0 1 0 0 1 0
AT1G75490_MA1250.1_JASPAR_rc_shift9 (AT1G75490:MA1250.1:JASPAR_rc)	0.756	0.554	1.023	0.908	0.906	738	523	846	433	572	622.400	; assembly_13 versus AT1G75490_MA1250.1_JASPAR_rc (AT1G75490:MA1250.1:JASPAR_rc); m=131/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 622.4; ---------wGgCGGYGGmg ; cor=0.756; Ncor=0.554; logoDP=1.023; NsEucl=0.908; NSW=0.906; rcor=738; rNcor=523; rlogoDP=846; rNsEucl=433; rNSW=572; rank_mean=622.400; match_rank= a 0 0 0 0 0 0 0 0 0 172 133 107 6 0 2 1 0 31 221 93 c 0 0 0 0 0 0 0 0 0 127 8 10 519 0 1 160 0 18 205 30 g 0 0 0 0 0 0 0 0 0 21 395 366 0 556 554 0 551 489 13 360 t 0 0 0 0 0 0 0 0 0 237 21 74 32 1 0 396 6 19 118 74
AT1G19210_MA1234.1_JASPAR_shift7 (AT1G19210:MA1234.1:JASPAR)	0.716	0.563	4.165	0.903	0.896	968	496	492	538	685	635.800	; assembly_13 versus AT1G19210_MA1234.1_JASPAR (AT1G19210:MA1234.1:JASPAR); m=132/229; ncol2=14; w=-2; offset=-2; strand=D; shift=7; score= 635.8; -------dtgGwCGGyGrhg ; cor=0.716; Ncor=0.563; logoDP=4.165; NsEucl=0.903; NSW=0.896; rcor=968; rNcor=496; rlogoDP=492; rNsEucl=538; rNSW=685; rank_mean=635.800; match_rank= a 0 0 0 0 0 0 0 217 127 47 0 291 0 0 0 43 27 160 195 136 c 0 0 0 0 0 0 0 45 34 19 0 79 599 0 0 185 9 72 157 46 g 0 0 0 0 0 0 0 183 53 403 599 42 0 599 599 0 524 306 84 292 t 0 0 0 0 0 0 0 154 385 130 0 187 0 0 0 371 39 61 163 125
ERF115_MA2013.2_JASPAR_rc_shift10 (ERF115:MA2013.2:JASPAR_rc)	0.780	0.650	0.283	0.897	0.894	619	191	1015	654	711	638.000	; assembly_13 versus ERF115_MA2013.2_JASPAR_rc (ERF115:MA2013.2:JASPAR_rc); m=133/229; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 638; ----------kGCGGCGGCG ; cor=0.780; Ncor=0.650; logoDP=0.283; NsEucl=0.897; NSW=0.894; rcor=619; rNcor=191; rlogoDP=1015; rNsEucl=654; rNSW=711; rank_mean=638.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 97 121 18 12 24 10 10 18 126 32 c 0 0 0 0 0 0 0 0 0 0 42 55 840 0 12 880 6 35 715 15 g 0 0 0 0 0 0 0 0 0 0 286 698 3 880 865 1 866 839 8 815 t 0 0 0 0 0 0 0 0 0 0 480 31 44 13 4 14 23 13 56 43
ERF3_MA1005.1_JASPAR_rc_shift12 (ERF3:MA1005.1:JASPAR_rc)	0.774	0.563	3.760	0.886	0.896	650	495	552	821	683	640.200	; assembly_13 versus ERF3_MA1005.1_JASPAR_rc (ERF3:MA1005.1:JASPAR_rc); m=134/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 640.2; ------------yGgCGGCG ; cor=0.774; Ncor=0.563; logoDP=3.760; NsEucl=0.886; NSW=0.896; rcor=650; rNcor=495; rlogoDP=552; rNsEucl=821; rNSW=683; rank_mean=640.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 116 16 114 0 0 0 0 80 c 0 0 0 0 0 0 0 0 0 0 0 0 279 0 186 985 14 114 985 80 g 0 0 0 0 0 0 0 0 0 0 0 0 23 904 643 0 985 885 0 760 t 0 0 0 0 0 0 0 0 0 0 0 0 581 79 57 14 0 0 14 80
AT5G07580_M0035_1.02_CISBP_shift12 (AT5G07580:M0035_1.02:CISBP)	0.778	0.519	0.998	0.898	0.917	626	647	855	630	448	641.200	; assembly_13 versus AT5G07580_M0035_1.02_CISBP (AT5G07580:M0035_1.02:CISBP); m=135/229; ncol2=9; w=0; offset=3; strand=D; shift=12; score= 641.2; ------------ygsYGgcy ; cor=0.778; Ncor=0.519; logoDP=0.998; NsEucl=0.898; NSW=0.917; rcor=626; rNcor=647; rlogoDP=855; rNsEucl=630; rNSW=448; rank_mean=641.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 13 9 11 1 13 12 16 17 c 0 0 0 0 0 0 0 0 0 0 0 0 27 10 35 68 6 19 48 32 g 0 0 0 0 0 0 0 0 0 0 0 0 20 67 36 0 70 48 13 21 t 0 0 0 0 0 0 0 0 0 0 0 0 40 14 18 31 11 21 23 30
ERF7.ampDAP_M0063_AthalianaCistrome_shift8 (ERF7.ampDAP:M0063:AthalianaCistrome)	0.767	0.402	5.078	0.906	0.904	688	1079	372	461	607	641.400	; assembly_13 versus ERF7.ampDAP_M0063_AthalianaCistrome (ERF7.ampDAP:M0063:AthalianaCistrome); m=136/229; ncol2=21; w=-1; offset=-1; strand=D; shift=8; score= 641.4; --------ayGGCGGCGgmr ; cor=0.767; Ncor=0.402; logoDP=5.078; NsEucl=0.906; NSW=0.904; rcor=688; rNcor=1079; rlogoDP=372; rNsEucl=461; rNSW=607; rank_mean=641.400; match_rank= a 0 0 0 0 0 0 0 0 315 59 2 103 0 0 0 1 0 65 219 151 c 0 0 0 0 0 0 0 0 23 164 0 1 579 0 2 577 7 119 172 33 g 0 0 0 0 0 0 0 0 120 7 537 469 0 579 576 0 481 365 69 301 t 0 0 0 0 0 0 0 0 121 349 40 6 0 0 1 1 91 30 119 94
ERF3_M0011_1.02_CISBP_rc_shift12 (ERF3:M0011_1.02:CISBP_rc)	0.773	0.562	3.816	0.886	0.896	653	500	542	825	689	641.800	; assembly_13 versus ERF3_M0011_1.02_CISBP_rc (ERF3:M0011_1.02:CISBP_rc); m=137/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 641.8; ------------yGgCGGCG ; cor=0.773; Ncor=0.562; logoDP=3.816; NsEucl=0.886; NSW=0.896; rcor=653; rNcor=500; rlogoDP=542; rNsEucl=825; rNSW=689; rank_mean=641.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 12 2 11 0 0 0 0 8 c 0 0 0 0 0 0 0 0 0 0 0 0 28 0 19 99 1 11 99 8 g 0 0 0 0 0 0 0 0 0 0 0 0 2 90 64 0 99 89 0 76 t 0 0 0 0 0 0 0 0 0 0 0 0 58 8 6 1 0 0 1 8
EREB138_MA2415.1_JASPAR_rc_shift11 (EREB138:MA2415.1:JASPAR_rc)	0.782	0.587	2.695	0.890	0.892	600	404	695	771	740	642.000	; assembly_13 versus EREB138_MA2415.1_JASPAR_rc (EREB138:MA2415.1:JASPAR_rc); m=138/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 642; -----------ATGGCGGCk ; cor=0.782; Ncor=0.587; logoDP=2.695; NsEucl=0.890; NSW=0.892; rcor=600; rNcor=404; rlogoDP=695; rNsEucl=771; rNSW=740; rank_mean=642.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 5360 83 55 96 123 102 76 101 353 c 0 0 0 0 0 0 0 0 0 0 0 357 588 99 128 5888 242 134 5958 539 g 0 0 0 0 0 0 0 0 0 0 0 446 154 6124 6075 156 5826 6069 183 2127 t 0 0 0 0 0 0 0 0 0 0 0 193 5531 78 57 189 186 77 114 3337
ERF096_MA0998.1_JASPAR_rc_shift11 (ERF096:MA0998.1:JASPAR_rc)	0.746	0.560	2.512	0.897	0.905	791	504	716	649	590	650.000	; assembly_13 versus ERF096_MA0998.1_JASPAR_rc (ERF096:MA0998.1:JASPAR_rc); m=139/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 650; -----------rtGgCGGCk ; cor=0.746; Ncor=0.560; logoDP=2.512; NsEucl=0.897; NSW=0.905; rcor=791; rNcor=504; rlogoDP=716; rNsEucl=649; rNSW=590; rank_mean=650.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 290 200 38 149 19 32 27 13 76 c 0 0 0 0 0 0 0 0 0 0 0 223 240 24 131 928 21 36 939 167 g 0 0 0 0 0 0 0 0 0 0 0 254 176 903 591 10 850 905 13 468 t 0 0 0 0 0 0 0 0 0 0 0 233 384 35 129 43 97 32 34 289
ERF115_MA2013.1_JASPAR_rc_shift8 (ERF115:MA2013.1:JASPAR_rc)	0.776	0.569	0.283	0.905	0.901	637	467	1014	494	641	650.600	; assembly_13 versus ERF115_MA2013.1_JASPAR_rc (ERF115:MA2013.1:JASPAR_rc); m=140/229; ncol2=15; w=-1; offset=-1; strand=R; shift=8; score= 650.6; --------gykGCGGCGGCG ; cor=0.776; Ncor=0.569; logoDP=0.283; NsEucl=0.905; NSW=0.901; rcor=637; rNcor=467; rlogoDP=1014; rNsEucl=494; rNSW=641; rank_mean=650.600; match_rank= a 0 0 0 0 0 0 0 0 221 166 97 121 18 12 24 10 10 18 126 32 c 0 0 0 0 0 0 0 0 92 375 42 55 840 0 12 880 6 35 715 15 g 0 0 0 0 0 0 0 0 418 71 286 698 3 880 865 1 866 839 8 815 t 0 0 0 0 0 0 0 0 174 293 480 31 44 13 4 14 23 13 56 43
AT5G43410_M0037_1.02_CISBP_rc_shift11 (AT5G43410:M0037_1.02:CISBP_rc)	0.744	0.558	2.569	0.897	0.904	797	510	709	660	603	655.800	; assembly_13 versus AT5G43410_M0037_1.02_CISBP_rc (AT5G43410:M0037_1.02:CISBP_rc); m=141/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 655.8; -----------rtGgCGGCk ; cor=0.744; Ncor=0.558; logoDP=2.569; NsEucl=0.897; NSW=0.904; rcor=797; rNcor=510; rlogoDP=709; rNsEucl=660; rNSW=603; rank_mean=655.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 29 20 4 15 2 3 2 1 8 c 0 0 0 0 0 0 0 0 0 0 0 23 24 2 13 93 2 4 95 16 g 0 0 0 0 0 0 0 0 0 0 0 25 18 90 59 1 85 91 1 47 t 0 0 0 0 0 0 0 0 0 0 0 23 38 4 13 4 10 3 3 29
ERF5.ampDAP_M0101_AthalianaCistrome_rc_shift3 (ERF5.ampDAP:M0101:AthalianaCistrome_rc)	0.788	0.413	1.109	0.911	0.912	564	1028	835	369	500	659.200	; assembly_13 versus ERF5.ampDAP_M0101_AthalianaCistrome_rc (ERF5.ampDAP:M0101:AthalianaCistrome_rc); m=142/229; ncol2=21; w=-6; offset=-6; strand=R; shift=3; score= 659.2; ---cggyggykryGGCGGCG ; cor=0.788; Ncor=0.413; logoDP=1.109; NsEucl=0.911; NSW=0.912; rcor=564; rNcor=1028; rlogoDP=835; rNsEucl=369; rNSW=500; rank_mean=659.200; match_rank= a 0 0 0 97 113 125 126 132 113 121 140 169 41 1 53 2 0 0 4 2 c 0 0 0 250 72 100 234 40 72 208 56 38 292 0 4 555 0 9 557 11 g 0 0 0 108 277 255 60 271 277 44 226 302 1 566 508 0 567 557 0 451 t 0 0 0 112 105 87 147 124 105 194 145 58 233 0 2 10 0 1 6 103
ERF73.ampDAP_M0138_AthalianaCistrome_shift8 (ERF73.ampDAP:M0138:AthalianaCistrome)	0.766	0.401	5.521	0.902	0.894	691	1081	291	565	710	667.600	; assembly_13 versus ERF73.ampDAP_M0138_AthalianaCistrome (ERF73.ampDAP:M0138:AthalianaCistrome); m=143/229; ncol2=21; w=-1; offset=-1; strand=D; shift=8; score= 667.6; --------ryGGCGGCGGmG ; cor=0.766; Ncor=0.401; logoDP=5.521; NsEucl=0.902; NSW=0.894; rcor=691; rNcor=1081; rlogoDP=291; rNsEucl=565; rNSW=710; rank_mean=667.600; match_rank= a 0 0 0 0 0 0 0 0 73 14 7 14 2 1 0 0 0 9 63 22 c 0 0 0 0 0 0 0 0 6 62 2 1 174 0 0 175 2 21 66 4 g 0 0 0 0 0 0 0 0 73 9 147 161 0 175 175 0 168 143 4 129 t 0 0 0 0 0 0 0 0 24 91 20 0 0 0 1 1 6 3 43 21
Solyc04g078640.3.1_AP2EREBP_1_AT1G46768_EEAD0649_EEADannot_shift13 (Solyc04g078640.3.1_AP2EREBP_1_AT1G46768:EEAD0649:EEADannot)	0.791	0.462	3.788	0.884	0.906	542	848	549	841	573	670.600	; assembly_13 versus Solyc04g078640.3.1_AP2EREBP_1_AT1G46768_EEAD0649_EEADannot (Solyc04g078640.3.1_AP2EREBP_1_AT1G46768:EEAD0649:EEADannot); m=144/229; ncol2=8; w=0; offset=4; strand=D; shift=13; score= 670.6; -------------GtCGGTG ; cor=0.791; Ncor=0.462; logoDP=3.788; NsEucl=0.884; NSW=0.906; rcor=542; rNcor=848; rlogoDP=549; rNsEucl=841; rNSW=573; rank_mean=670.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 2 23 0 0 0 5 7 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 93 0 0 18 6 g 0 0 0 0 0 0 0 0 0 0 0 0 0 91 18 0 100 100 0 70 t 0 0 0 0 0 0 0 0 0 0 0 0 0 7 51 7 0 0 77 17
ERF2_M0038_1.02_CISBP_rc_shift12 (ERF2:M0038_1.02:CISBP_rc)	0.782	0.481	0.141	0.903	0.924	604	775	1078	542	359	671.600	; assembly_13 versus ERF2_M0038_1.02_CISBP_rc (ERF2:M0038_1.02:CISBP_rc); m=145/229; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 671.6; ------------tGgCGGCk ; cor=0.782; Ncor=0.481; logoDP=0.141; NsEucl=0.903; NSW=0.924; rcor=604; rNcor=775; rlogoDP=1078; rNsEucl=542; rNSW=359; rank_mean=671.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 22 11 21 4 9 7 6 15 c 0 0 0 0 0 0 0 0 0 0 0 0 22 9 15 78 4 14 72 24 g 0 0 0 0 0 0 0 0 0 0 0 0 22 68 46 2 70 69 8 32 t 0 0 0 0 0 0 0 0 0 0 0 0 34 12 18 16 17 10 14 29
RAP2-6_MA1052.1_JASPAR_rc_shift13 (RAP2-6:MA1052.1:JASPAR_rc)	0.850	0.496	0.589	0.883	0.905	258	726	927	852	597	672.000	; assembly_13 versus RAP2-6_MA1052.1_JASPAR_rc (RAP2-6:MA1052.1:JASPAR_rc); m=146/229; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 672; -------------GGCGGCG ; cor=0.850; Ncor=0.496; logoDP=0.589; NsEucl=0.883; NSW=0.905; rcor=258; rNcor=726; rlogoDP=927; rNsEucl=852; rNSW=597; rank_mean=672.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 10 20 3 1 1 2 8 c 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 990 2 104 989 7 g 0 0 0 0 0 0 0 0 0 0 0 0 0 921 947 3 985 894 2 958 t 0 0 0 0 0 0 0 0 0 0 0 0 0 66 20 4 12 2 7 27
EREB87_Mo17_1_EEAD0358_EEADannot_rc_shift9 (EREB87_Mo17_1:EEAD0358:EEADannot_rc)	0.718	0.718	3.667	0.889	0.864	955	71	560	795	983	672.800	; assembly_13 versus EREB87_Mo17_1_EEAD0358_EEADannot_rc (EREB87_Mo17_1:EEAD0358:EEADannot_rc); m=147/229; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 672.8; ---------cGGCGGCGGCG ; cor=0.718; Ncor=0.718; logoDP=3.667; NsEucl=0.889; NSW=0.864; rcor=955; rNcor=71; rlogoDP=560; rNsEucl=795; rNSW=983; rank_mean=672.800; match_rank= a 0 0 0 0 0 0 0 0 0 9 2 13 3 1 5 1 0 1 4 4 c 0 0 0 0 0 0 0 0 0 65 4 4 82 0 2 97 0 6 91 2 g 0 0 0 0 0 0 0 0 0 12 90 78 2 99 92 0 99 93 0 93 t 0 0 0 0 0 0 0 0 0 14 4 5 13 0 1 2 1 0 5 1
ATERF-4_M0022_1.02_CISBP_rc_shift10 (ATERF-4:M0022_1.02:CISBP_rc)	0.788	0.573	0.327	0.890	0.903	565	451	990	772	608	677.200	; assembly_13 versus ATERF-4_M0022_1.02_CISBP_rc (ATERF-4:M0022_1.02:CISBP_rc); m=148/229; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 677.2; ----------GgCGGCGg-- ; cor=0.788; Ncor=0.573; logoDP=0.327; NsEucl=0.890; NSW=0.903; rcor=565; rNcor=451; rlogoDP=990; rNsEucl=772; rNSW=608; rank_mean=677.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 4 15 0 0 1 1 9 9 0 0 c 0 0 0 0 0 0 0 0 0 0 4 13 99 1 8 95 12 22 0 0 g 0 0 0 0 0 0 0 0 0 0 80 66 0 98 90 2 73 52 0 0 t 0 0 0 0 0 0 0 0 0 0 12 6 1 1 1 2 6 17 0 0
ERF73.DAP_M0117_AthalianaCistrome_rc_shift6 (ERF73.DAP:M0117:AthalianaCistrome_rc)	0.772	0.404	2.919	0.908	0.906	658	1065	655	435	576	677.800	; assembly_13 versus ERF73.DAP_M0117_AthalianaCistrome_rc (ERF73.DAP:M0117:AthalianaCistrome_rc); m=149/229; ncol2=21; w=-3; offset=-3; strand=R; shift=6; score= 677.8; ------ygrhdryGGCGGCG ; cor=0.772; Ncor=0.404; logoDP=2.919; NsEucl=0.908; NSW=0.906; rcor=658; rNcor=1065; rlogoDP=655; rNsEucl=435; rNSW=576; rank_mean=677.800; match_rank= a 0 0 0 0 0 0 134 131 181 213 208 232 64 31 29 7 0 4 0 0 c 0 0 0 0 0 0 182 65 61 149 35 47 214 8 0 549 0 0 545 0 g 0 0 0 0 0 0 100 231 236 43 165 216 0 471 534 0 563 559 0 549 t 0 0 0 0 0 0 147 136 85 158 155 68 285 53 0 7 0 0 18 14
ERF10.ampDAP_M0091_AthalianaCistrome_shift0 (ERF10.ampDAP:M0091:AthalianaCistrome)	0.753	0.414	5.534	0.901	0.892	762	1022	288	579	739	678.000	; assembly_13 versus ERF10.ampDAP_M0091_AthalianaCistrome (ERF10.ampDAP:M0091:AthalianaCistrome); m=150/229; ncol2=20; w=-9; offset=-9; strand=D; shift=0; score= 678; cgrhrrwwrtGGCGGCGghk ; cor=0.753; Ncor=0.414; logoDP=5.534; NsEucl=0.901; NSW=0.892; rcor=762; rNcor=1022; rlogoDP=288; rNsEucl=579; rNSW=739; rank_mean=678.000; match_rank= a 135 126 149 148 153 194 212 247 254 58 2 42 0 0 0 1 1 39 219 141 c 181 107 93 174 73 80 105 31 37 132 0 0 565 0 0 564 0 138 162 26 g 123 203 214 96 224 202 58 123 183 4 507 513 0 565 565 0 549 362 35 247 t 126 129 109 147 115 89 190 164 91 371 56 10 0 0 0 0 15 26 149 151
ERF4_MA0992.1_JASPAR_rc_shift10 (ERF4:MA0992.1:JASPAR_rc)	0.786	0.572	0.336	0.890	0.903	571	455	981	776	610	678.600	; assembly_13 versus ERF4_MA0992.1_JASPAR_rc (ERF4:MA0992.1:JASPAR_rc); m=151/229; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 678.6; ----------GgCGGCGg-- ; cor=0.786; Ncor=0.572; logoDP=0.336; NsEucl=0.890; NSW=0.903; rcor=571; rNcor=455; rlogoDP=981; rNsEucl=776; rNSW=610; rank_mean=678.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 39 150 0 0 6 6 94 90 0 0 c 0 0 0 0 0 0 0 0 0 0 39 131 988 12 83 952 115 225 0 0 g 0 0 0 0 0 0 0 0 0 0 800 662 6 976 899 18 726 517 0 0 t 0 0 0 0 0 0 0 0 0 0 123 56 6 12 12 24 65 169 0 0
ERF073_MA1754.1_JASPAR_rc_shift6 (ERF073:MA1754.1:JASPAR_rc)	0.772	0.404	2.919	0.908	0.906	659	1067	656	436	578	679.200	; assembly_13 versus ERF073_MA1754.1_JASPAR_rc (ERF073:MA1754.1:JASPAR_rc); m=152/229; ncol2=21; w=-3; offset=-3; strand=R; shift=6; score= 679.2; ------ygrhdryGGCGGCG ; cor=0.772; Ncor=0.404; logoDP=2.919; NsEucl=0.908; NSW=0.906; rcor=659; rNcor=1067; rlogoDP=656; rNsEucl=436; rNSW=578; rank_mean=679.200; match_rank= a 0 0 0 0 0 0 238 233 321 378.33 369 412 114 55.062 51.51 12.433 0 7.105 0 0 c 0 0 0 0 0 0 323 115 108 265 62.167 83.481 380 14.21 0 975 0 0 968 0 g 0 0 0 0 0 0 177.62 410 419 76.377 293 384 0 836.59 948.49 0 1000 993 0 975 t 0 0 0 0 0 0 261 242 151 281 275 121 506 94.139 0 12.433 0 0 31.972 24.867
RAP2-3_MA1051.1_JASPAR_rc_shift13 (RAP2-3:MA1051.1:JASPAR_rc)	0.814	0.475	0.387	0.890	0.915	426	803	963	773	473	687.600	; assembly_13 versus RAP2-3_MA1051.1_JASPAR_rc (RAP2-3:MA1051.1:JASPAR_rc); m=153/229; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 687.6; -------------kGCGGCG ; cor=0.814; Ncor=0.475; logoDP=0.387; NsEucl=0.890; NSW=0.915; rcor=426; rNcor=803; rlogoDP=963; rNsEucl=773; rNSW=473; rank_mean=687.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 73 85 15 3 4 5 58 c 0 0 0 0 0 0 0 0 0 0 0 0 0 6 26 976 4 244 982 33 g 0 0 0 0 0 0 0 0 0 0 0 0 0 664 780 3 977 746 6 761 t 0 0 0 0 0 0 0 0 0 0 0 0 0 257 109 6 16 6 7 147
ERF104_MA1239.2_JASPAR_rc_shift8 (ERF104:MA1239.2:JASPAR_rc)	0.747	0.513	1.645	0.903	0.896	787	670	774	536	681	689.600	; assembly_13 versus ERF104_MA1239.2_JASPAR_rc (ERF104:MA1239.2:JASPAR_rc); m=154/229; ncol2=16; w=-1; offset=-1; strand=R; shift=8; score= 689.6; --------ryGGCGGCGgmg ; cor=0.747; Ncor=0.513; logoDP=1.645; NsEucl=0.903; NSW=0.896; rcor=787; rNcor=670; rlogoDP=774; rNsEucl=536; rNSW=681; rank_mean=689.600; match_rank= a 0 0 0 0 0 0 0 0 192 62 0 89 3 0 0 25 5 90 169 75 c 0 0 0 0 0 0 0 0 51 281 0 0 527 0 2 496 6 76 213 33 g 0 0 0 0 0 0 0 0 274 0 553 466 0 557 555 0 464 369 50 363 t 0 0 0 0 0 0 0 0 40 214 4 2 27 0 0 36 82 22 125 86
EREB46_ZmSHINE_Mo17_1_EEAD0350_EEADannot_rc_shift9 (EREB46_ZmSHINE_Mo17_1:EEAD0350:EEADannot_rc)	0.711	0.711	3.292	0.890	0.867	1019	89	607	775	961	690.200	; assembly_13 versus EREB46_ZmSHINE_Mo17_1_EEAD0350_EEADannot_rc (EREB46_ZmSHINE_Mo17_1:EEAD0350:EEADannot_rc); m=155/229; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 690.2; ---------cGGCGGCGGCG ; cor=0.711; Ncor=0.711; logoDP=3.292; NsEucl=0.890; NSW=0.867; rcor=1019; rNcor=89; rlogoDP=607; rNsEucl=775; rNSW=961; rank_mean=690.200; match_rank= a 0 0 0 0 0 0 0 0 0 10 3 11 6 1 3 0 0 3 8 4 c 0 0 0 0 0 0 0 0 0 67 0 0 81 0 0 84 0 7 76 2 g 0 0 0 0 0 0 0 0 0 7 95 81 0 99 94 1 100 88 3 94 t 0 0 0 0 0 0 0 0 0 16 2 8 13 0 3 15 0 2 13 0
ABR1.ampDAP_M0034_AthalianaCistrome_rc_shift2 (ABR1.ampDAP:M0034:AthalianaCistrome_rc)	0.786	0.412	0.207	0.913	0.916	570	1032	1056	334	461	690.600	; assembly_13 versus ABR1.ampDAP_M0034_AthalianaCistrome_rc (ABR1.ampDAP:M0034:AthalianaCistrome_rc); m=156/229; ncol2=21; w=-7; offset=-7; strand=R; shift=2; score= 690.6; --rygrawaTkGCGGCGgmg ; cor=0.786; Ncor=0.412; logoDP=0.207; NsEucl=0.913; NSW=0.916; rcor=570; rNcor=1032; rlogoDP=1056; rNsEucl=334; rNSW=461; rank_mean=690.600; match_rank= a 0 0 154 129 133 200 262 284 378 70 27 103 0 0 0 0 0 57 198 116 c 0 0 98 185 99 85 115 30 3 78 0 5 582 0 0 583 5 126 205 47 g 0 0 207 123 224 224 82 120 82 0 319 449 0 583 583 0 468 374 69 302 t 0 0 124 146 127 74 124 149 120 435 237 26 1 0 0 0 110 26 111 118
ERF5_M0039_1.02_CISBP_rc_shift9 (ERF5:M0039_1.02:CISBP_rc)	0.704	0.640	0.204	0.903	0.905	1067	214	1057	545	589	694.400	; assembly_13 versus ERF5_M0039_1.02_CISBP_rc (ERF5:M0039_1.02:CISBP_rc); m=157/229; ncol2=10; w=0; offset=0; strand=R; shift=9; score= 694.4; ---------kggcggCksd- ; cor=0.704; Ncor=0.640; logoDP=0.204; NsEucl=0.903; NSW=0.905; rcor=1067; rNcor=214; rlogoDP=1057; rNsEucl=545; rNSW=589; rank_mean=694.400; match_rank= a 0 0 0 0 0 0 0 0 0 21 12 24 8 7 9 5 17 23 25 0 c 0 0 0 0 0 0 0 0 0 17 11 21 59 7 18 75 18 27 20 0 g 0 0 0 0 0 0 0 0 0 30 60 35 12 67 61 6 37 27 28 0 t 0 0 0 0 0 0 0 0 0 32 17 20 21 19 12 14 28 23 27 0
ERF15_MA1231.1_JASPAR_rc_shift11 (ERF15:MA1231.1:JASPAR_rc)	0.820	0.434	0.165	0.901	0.912	400	944	1071	573	503	698.200	; assembly_13 versus ERF15_MA1231.1_JASPAR_rc (ERF15:MA1231.1:JASPAR_rc); m=158/229; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 698.2; -----------ryGGCGGCK ; cor=0.820; Ncor=0.434; logoDP=0.165; NsEucl=0.901; NSW=0.912; rcor=400; rNcor=944; rlogoDP=1071; rNsEucl=573; rNSW=503; rank_mean=698.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 205 66 1 26 5 0 0 11 0 c 0 0 0 0 0 0 0 0 0 0 0 33 322 0 0 575 0 0 550 8 g 0 0 0 0 0 0 0 0 0 0 0 332 0 593 570 0 572 596 0 432 t 0 0 0 0 0 0 0 0 0 0 0 26 208 2 0 16 24 0 35 156
ERF6.DAP_M0122_AthalianaCistrome_rc_shift6 (ERF6.DAP:M0122:AthalianaCistrome_rc)	0.772	0.404	3.035	0.905	0.900	657	1064	636	497	644	699.600	; assembly_13 versus ERF6.DAP_M0122_AthalianaCistrome_rc (ERF6.DAP:M0122:AthalianaCistrome_rc); m=159/229; ncol2=21; w=-3; offset=-3; strand=R; shift=6; score= 699.6; ------ckgykryGGCGGCG ; cor=0.772; Ncor=0.404; logoDP=3.035; NsEucl=0.905; NSW=0.900; rcor=657; rNcor=1064; rlogoDP=636; rNsEucl=497; rNSW=644; rank_mean=699.600; match_rank= a 0 0 0 0 0 0 126 118 118 126 127 136 46 0 16 0 0 0 1 0 c 0 0 0 0 0 0 184 43 62 152 43 49 255 0 0 507 0 1 507 3 g 0 0 0 0 0 0 78 223 240 35 214 279 2 513 497 0 513 512 0 471 t 0 0 0 0 0 0 125 129 93 200 129 49 210 0 0 6 0 0 5 39
ERF054_MA1232.2_JASPAR_shift10 (ERF054:MA1232.2:JASPAR)	0.753	0.547	4.198	0.879	0.883	760	543	484	899	819	701.000	; assembly_13 versus ERF054_MA1232.2_JASPAR (ERF054:MA1232.2:JASPAR); m=160/229; ncol2=8; w=0; offset=1; strand=D; shift=10; score= 701; ----------GdCGGyGg-- ; cor=0.753; Ncor=0.547; logoDP=4.198; NsEucl=0.879; NSW=0.883; rcor=760; rNcor=543; rlogoDP=484; rNsEucl=899; rNSW=819; rank_mean=701.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 11 153 1 0 0 0 23 77 0 0 c 0 0 0 0 0 0 0 0 0 0 3 21 564 0 2 213 12 96 0 0 g 0 0 0 0 0 0 0 0 0 0 546 199 0 567 565 0 484 374 0 0 t 0 0 0 0 0 0 0 0 0 0 7 194 2 0 0 354 48 20 0 0
ERF11_MA1001.3_JASPAR_rc_shift9 (ERF11:MA1001.3:JASPAR_rc)	0.703	0.645	2.545	0.896	0.880	1073	209	714	679	840	703.000	; assembly_13 versus ERF11_MA1001.3_JASPAR_rc (ERF11:MA1001.3:JASPAR_rc); m=161/229; ncol2=12; w=0; offset=0; strand=R; shift=9; score= 703; ---------ygGyGGCGGCG ; cor=0.703; Ncor=0.645; logoDP=2.545; NsEucl=0.896; NSW=0.880; rcor=1073; rNcor=209; rlogoDP=714; rNsEucl=679; rNSW=840; rank_mean=703.000; match_rank= a 0 0 0 0 0 0 0 0 0 290 286 157 81 18 74 24 6 9 38 109 c 0 0 0 0 0 0 0 0 0 522 144 45 435 11 9 1271 5 13 1270 63 g 0 0 0 0 0 0 0 0 0 126 653 1086 5 1304 1281 2 1346 1347 6 1008 t 0 0 0 0 0 0 0 0 0 435 290 85 852 40 9 76 16 4 59 193
AT3G57600_MA1242.1_JASPAR_rc_shift13 (AT3G57600:MA1242.1:JASPAR_rc)	0.858	0.400	0.155	0.893	0.920	233	1086	1073	722	415	705.800	; assembly_13 versus AT3G57600_MA1242.1_JASPAR_rc (AT3G57600:MA1242.1:JASPAR_rc); m=162/229; ncol2=11; w=0; offset=4; strand=R; shift=13; score= 705.8; -------------GGCGGYG ; cor=0.858; Ncor=0.400; logoDP=0.155; NsEucl=0.893; NSW=0.920; rcor=233; rNcor=1086; rlogoDP=1073; rNsEucl=722; rNSW=415; rank_mean=705.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 110 19 0 3 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 453 0 0 131 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 346 438 0 475 478 0 477 t 0 0 0 0 0 0 0 0 0 0 0 0 0 20 21 25 0 0 347 1
AT4G18450_MA1228.1_JASPAR_shift8 (AT4G18450:MA1228.1:JASPAR)	0.733	0.474	4.956	0.897	0.884	867	808	397	650	813	707.000	; assembly_13 versus AT4G18450_MA1228.1_JASPAR (AT4G18450:MA1228.1:JASPAR); m=163/229; ncol2=17; w=-1; offset=-1; strand=D; shift=8; score= 707; --------ryGGCGGCGGmg ; cor=0.733; Ncor=0.474; logoDP=4.956; NsEucl=0.897; NSW=0.884; rcor=867; rNcor=808; rlogoDP=397; rNsEucl=650; rNSW=813; rank_mean=707.000; match_rank= a 0 0 0 0 0 0 0 0 187 78 0 34 0 0 0 13 6 85 179 91 c 0 0 0 0 0 0 0 0 52 289 0 0 526 0 0 505 7 69 205 25 g 0 0 0 0 0 0 0 0 263 0 534 503 0 537 537 0 472 378 32 337 t 0 0 0 0 0 0 0 0 35 170 3 0 11 0 0 19 52 5 121 84
ERF057_MA1753.2_JASPAR_rc_shift10 (ERF057:MA1753.2:JASPAR_rc)	0.773	0.515	0.255	0.901	0.902	652	659	1035	570	619	707.000	; assembly_13 versus ERF057_MA1753.2_JASPAR_rc (ERF057:MA1753.2:JASPAR_rc); m=164/229; ncol2=14; w=0; offset=1; strand=R; shift=10; score= 707; ----------GGCGGyGGhG ; cor=0.773; Ncor=0.515; logoDP=0.255; NsEucl=0.901; NSW=0.902; rcor=652; rNcor=659; rlogoDP=1035; rNsEucl=570; rNSW=619; rank_mean=707.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 92 171 33 0 0 10 3 59 337 93 c 0 0 0 0 0 0 0 0 0 0 0 12 874 0 0 578 12 45 389 31 g 0 0 0 0 0 0 0 0 0 0 856 694 3 1000 995 2 983 862 3 803 t 0 0 0 0 0 0 0 0 0 0 52 123 90 0 5 410 2 35 270 73
ERF109_MA1053.1_JASPAR_rc_shift13 (ERF109:MA1053.1:JASPAR_rc)	0.822	0.480	0.603	0.883	0.904	385	782	925	855	598	709.000	; assembly_13 versus ERF109_MA1053.1_JASPAR_rc (ERF109:MA1053.1:JASPAR_rc); m=165/229; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 709; -------------GGCGGCG ; cor=0.822; Ncor=0.480; logoDP=0.603; NsEucl=0.883; NSW=0.904; rcor=385; rNcor=782; rlogoDP=925; rNsEucl=855; rNSW=598; rank_mean=709.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 18 86 5 3 2 3 6 c 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 978 2 168 989 8 g 0 0 0 0 0 0 0 0 0 0 0 0 0 773 862 13 982 827 5 936 t 0 0 0 0 0 0 0 0 0 0 0 0 0 207 38 4 13 3 3 50
Zm00001d020267_MA1817.1_JASPAR_rc_shift8 (Zm00001d020267:MA1817.1:JASPAR_rc)	0.712	0.602	3.256	0.893	0.875	1002	337	613	720	897	713.800	; assembly_13 versus Zm00001d020267_MA1817.1_JASPAR_rc (Zm00001d020267:MA1817.1:JASPAR_rc); m=166/229; ncol2=13; w=-1; offset=-1; strand=R; shift=8; score= 713.8; --------gcGGCGGCGGCg ; cor=0.712; Ncor=0.602; logoDP=3.256; NsEucl=0.893; NSW=0.875; rcor=1002; rNcor=337; rlogoDP=613; rNsEucl=720; rNSW=897; rank_mean=713.800; match_rank= a 0 0 0 0 0 0 0 0 2485 1892 420 508 471 329 399 331 351 403 488 1929 c 0 0 0 0 0 0 0 0 3317 7641 760 657 13639 446 632 13656 555 683 13149 2985 g 0 0 0 0 0 0 0 0 6993 3064 13267 13257 233 13749 13462 247 13624 13416 711 8346 t 0 0 0 0 0 0 0 0 2006 2204 354 379 458 277 308 567 271 299 453 1541
Zm00001d020267_MA1817.2_JASPAR_rc_shift10 (Zm00001d020267:MA1817.2:JASPAR_rc)	0.722	0.657	2.671	0.886	0.869	928	178	698	830	943	715.400	; assembly_13 versus Zm00001d020267_MA1817.2_JASPAR_rc (Zm00001d020267:MA1817.2:JASPAR_rc); m=167/229; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 715.4; ----------GGCGGCGGCg ; cor=0.722; Ncor=0.657; logoDP=2.671; NsEucl=0.886; NSW=0.869; rcor=928; rNcor=178; rlogoDP=698; rNsEucl=830; rNSW=943; rank_mean=715.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 420 508 471 329 399 331 351 403 488 1929 c 0 0 0 0 0 0 0 0 0 0 760 657 13639 446 632 13656 555 683 13149 2985 g 0 0 0 0 0 0 0 0 0 0 13267 13257 233 13749 13462 247 13624 13416 711 8346 t 0 0 0 0 0 0 0 0 0 0 354 379 458 277 308 567 271 299 453 1541
LOB_MA2022.1_JASPAR_rc_shift4 (LOB:MA2022.1:JASPAR_rc)	0.764	0.495	0.272	0.905	0.901	700	734	1022	492	637	717.000	; assembly_13 versus LOB_MA2022.1_JASPAR_rc (LOB:MA2022.1:JASPAR_rc); m=168/229; ncol2=17; w=-5; offset=-5; strand=R; shift=4; score= 717; ----ggcrgckGCGGCGGCG ; cor=0.764; Ncor=0.495; logoDP=0.272; NsEucl=0.905; NSW=0.901; rcor=700; rNcor=734; rlogoDP=1022; rNsEucl=492; rNSW=637; rank_mean=717.000; match_rank= a 0 0 0 0 167 140 178 261 113 101 103 50 24 27 16 23 24 18 133 86 c 0 0 0 0 87 96 373 56 71 532 44 38 733 8 7 729 4 10 552 24 g 0 0 0 0 382 463 74 331 538 33 398 693 1 721 768 4 739 760 18 569 t 0 0 0 0 159 96 170 147 73 129 250 14 37 39 4 39 28 7 92 116
HRD_M0019_1.02_CISBP_rc_shift12 (HRD:M0019_1.02:CISBP_rc)	0.738	0.492	1.399	0.894	0.909	829	745	797	715	529	723.000	; assembly_13 versus HRD_M0019_1.02_CISBP_rc (HRD:M0019_1.02:CISBP_rc); m=169/229; ncol2=9; w=0; offset=3; strand=R; shift=12; score= 723; ------------tGtCGGya ; cor=0.738; Ncor=0.492; logoDP=1.399; NsEucl=0.894; NSW=0.909; rcor=829; rNcor=745; rlogoDP=797; rNsEucl=715; rNSW=529; rank_mean=723.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 20 10 15 3 3 9 8 41 c 0 0 0 0 0 0 0 0 0 0 0 0 22 10 8 90 5 2 57 19 g 0 0 0 0 0 0 0 0 0 0 0 0 16 71 23 3 88 89 4 23 t 0 0 0 0 0 0 0 0 0 0 0 0 42 9 54 4 4 0 31 17
EREB2_Mo17_1_EEAD0346_EEADannot_rc_shift10 (EREB2_Mo17_1:EEAD0346:EEADannot_rc)	0.762	0.476	2.637	0.896	0.891	710	797	701	677	741	725.200	; assembly_13 versus EREB2_Mo17_1_EEAD0346_EEADannot_rc (EREB2_Mo17_1:EEAD0346:EEADannot_rc); m=170/229; ncol2=15; w=0; offset=1; strand=R; shift=10; score= 725.2; ----------GrCGGCGGCG ; cor=0.762; Ncor=0.476; logoDP=2.637; NsEucl=0.896; NSW=0.891; rcor=710; rNcor=797; rlogoDP=701; rNsEucl=677; rNSW=741; rank_mean=725.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 4 25 13 3 7 1 0 8 6 3 c 0 0 0 0 0 0 0 0 0 0 10 8 71 0 0 95 1 4 86 0 g 0 0 0 0 0 0 0 0 0 0 79 60 2 97 89 0 97 85 0 96 t 0 0 0 0 0 0 0 0 0 0 7 7 14 0 4 4 2 3 8 1
IG1_MA2418.1_JASPAR_rc_shift12 (IG1:MA2418.1:JASPAR_rc)	0.777	0.518	2.464	0.882	0.889	635	654	722	866	763	728.000	; assembly_13 versus IG1_MA2418.1_JASPAR_rc (IG1:MA2418.1:JASPAR_rc); m=171/229; ncol2=9; w=0; offset=3; strand=R; shift=12; score= 728; ------------TGGCGGCa ; cor=0.777; Ncor=0.518; logoDP=2.464; NsEucl=0.882; NSW=0.889; rcor=635; rNcor=654; rlogoDP=722; rNsEucl=866; rNSW=763; rank_mean=728.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 274 103 110 151 194 106 142 5426 c 0 0 0 0 0 0 0 0 0 0 0 0 1478 218 188 7736 237 293 7717 663 g 0 0 0 0 0 0 0 0 0 0 0 0 443 7732 7805 114 7586 7665 217 1865 t 0 0 0 0 0 0 0 0 0 0 0 0 5972 114 64 166 150 103 91 213
EREB138_Mo17_1_EEAD0332_EEADannot_rc_shift9 (EREB138_Mo17_1:EEAD0332:EEADannot_rc)	0.721	0.529	1.565	0.901	0.892	936	604	786	578	738	728.400	; assembly_13 versus EREB138_Mo17_1_EEAD0332_EEADannot_rc (EREB138_Mo17_1:EEAD0332:EEADannot_rc); m=172/229; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 728.4; ---------cGrCGGCGGCG ; cor=0.721; Ncor=0.529; logoDP=1.565; NsEucl=0.901; NSW=0.892; rcor=936; rNcor=604; rlogoDP=786; rNsEucl=578; rNSW=738; rank_mean=728.400; match_rank= a 0 0 0 0 0 0 0 0 0 11 5 26 8 5 14 3 4 14 6 8 c 0 0 0 0 0 0 0 0 0 58 4 0 74 0 6 83 0 3 82 0 g 0 0 0 0 0 0 0 0 0 15 86 67 3 93 70 0 96 81 3 92 t 0 0 0 0 0 0 0 0 0 16 5 7 15 2 10 14 0 2 9 0
CRF4.DAP_M0131_AthalianaCistrome_rc_shift0 (CRF4.DAP:M0131:AthalianaCistrome_rc)	0.770	0.403	0.615	0.908	0.906	668	1071	918	434	574	733.000	; assembly_13 versus CRF4.DAP_M0131_AthalianaCistrome_rc (CRF4.DAP:M0131:AthalianaCistrome_rc); m=173/229; ncol2=21; w=-9; offset=-9; strand=R; shift=0; score= 733; cgGmgghgGyGGCGGCGGmg ; cor=0.770; Ncor=0.403; logoDP=0.615; NsEucl=0.908; NSW=0.906; rcor=668; rNcor=1071; rlogoDP=918; rNsEucl=434; rNSW=574; rank_mean=733.000; match_rank= a 51 46 26 65 39 47 62 44 45 24 3 36 6 0 0 24 7 8 92 34 c 91 22 25 95 24 17 88 26 9 105 0 0 208 0 0 174 0 22 77 0 g 34 144 162 18 107 127 10 125 159 10 207 190 0 226 226 2 207 185 13 144 t 50 14 13 48 56 35 66 31 13 87 16 0 12 0 0 26 12 11 44 48
ERF115.DAP_M0081_AthalianaCistrome_rc_shift6 (ERF115.DAP:M0081:AthalianaCistrome_rc)	0.712	0.522	0.941	0.904	0.898	1003	633	867	520	669	738.400	; assembly_13 versus ERF115.DAP_M0081_AthalianaCistrome_rc (ERF115.DAP:M0081:AthalianaCistrome_rc); m=174/229; ncol2=15; w=-3; offset=-3; strand=R; shift=6; score= 738.4; ------cGGcgrygRCGGCG ; cor=0.712; Ncor=0.522; logoDP=0.941; NsEucl=0.904; NSW=0.898; rcor=1003; rNcor=633; rlogoDP=867; rNsEucl=520; rNSW=669; rank_mean=738.400; match_rank= a 0 0 0 0 0 0 75 73 106 132 96 187 97 57 160 17 0 10 37 15 c 0 0 0 0 0 0 360 33 14 345 20 15 244 5 8 532 0 25 497 8 g 0 0 0 0 0 0 37 436 449 10 368 350 7 406 426 0 585 556 0 527 t 0 0 0 0 0 0 127 57 30 112 115 47 251 131 5 50 14 8 65 49
ESE1.ampDAP_M0133_AthalianaCistrome_shift7 (ESE1.ampDAP:M0133:AthalianaCistrome)	0.739	0.406	4.988	0.898	0.886	822	1054	390	637	794	739.400	; assembly_13 versus ESE1.ampDAP_M0133_AthalianaCistrome (ESE1.ampDAP:M0133:AthalianaCistrome); m=175/229; ncol2=20; w=-2; offset=-2; strand=D; shift=7; score= 739.4; -------rryGGCGGCGGcg ; cor=0.739; Ncor=0.406; logoDP=4.988; NsEucl=0.898; NSW=0.886; rcor=822; rNcor=1054; rlogoDP=390; rNsEucl=637; rNSW=794; rank_mean=739.400; match_rank= a 0 0 0 0 0 0 0 68 96 48 0 21 0 0 0 7 4 27 61 40 c 0 0 0 0 0 0 0 28 15 122 0 0 254 0 0 246 2 50 123 11 g 0 0 0 0 0 0 0 111 131 4 260 239 0 255 260 0 239 182 20 167 t 0 0 0 0 0 0 0 53 18 86 0 0 6 5 0 7 15 1 56 42
ATERF15_M0017_1.02_CISBP_shift12 (ATERF15:M0017_1.02:CISBP)	0.728	0.530	2.416	0.887	0.898	892	600	726	815	670	740.600	; assembly_13 versus ATERF15_M0017_1.02_CISBP (ATERF15:M0017_1.02:CISBP); m=176/229; ncol2=8; w=0; offset=3; strand=D; shift=12; score= 740.6; ------------cGsCGGCc ; cor=0.728; Ncor=0.530; logoDP=2.416; NsEucl=0.887; NSW=0.898; rcor=892; rNcor=600; rlogoDP=726; rNsEucl=815; rNSW=670; rank_mean=740.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 20 3 2 3 8 3 3 10 c 0 0 0 0 0 0 0 0 0 0 0 0 50 5 61 89 3 23 91 59 g 0 0 0 0 0 0 0 0 0 0 0 0 13 89 34 5 84 71 3 17 t 0 0 0 0 0 0 0 0 0 0 0 0 17 3 3 3 5 3 3 14
EREB4_B73_1_m1_EEAD0353_EEADannot_shift11 (EREB4_B73_1_m1:EEAD0353:EEADannot)	0.758	0.401	3.352	0.896	0.902	724	1080	598	681	625	741.600	; assembly_13 versus EREB4_B73_1_m1_EEAD0353_EEADannot (EREB4_B73_1_m1:EEAD0353:EEADannot); m=177/229; ncol2=15; w=0; offset=2; strand=D; shift=11; score= 741.6; -----------gyGgCGGyG ; cor=0.758; Ncor=0.401; logoDP=3.352; NsEucl=0.896; NSW=0.902; rcor=724; rNcor=1080; rlogoDP=598; rNsEucl=681; rNSW=625; rank_mean=741.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 18 10 5 8 2 4 7 3 0 c 0 0 0 0 0 0 0 0 0 0 0 14 55 0 5 80 0 0 52 0 g 0 0 0 0 0 0 0 0 0 0 0 57 3 93 65 4 96 89 3 100 t 0 0 0 0 0 0 0 0 0 0 0 11 32 2 22 14 0 4 42 0
ERF118_MA1671.2_JASPAR_rc_shift10 (ERF118:MA1671.2:JASPAR_rc)	0.786	0.572	0.222	0.882	0.888	576	459	1049	877	776	747.400	; assembly_13 versus ERF118_MA1671.2_JASPAR_rc (ERF118:MA1671.2:JASPAR_rc); m=178/229; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 747.4; ----------gGCGGCGg-- ; cor=0.786; Ncor=0.572; logoDP=0.222; NsEucl=0.882; NSW=0.888; rcor=576; rNcor=459; rlogoDP=1049; rNsEucl=877; rNSW=776; rank_mean=747.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 617 48 30 7 1 10 26 482 0 0 c 0 0 0 0 0 0 0 0 0 0 286 11 3190 3 2 3186 0 354 0 0 g 0 0 0 0 0 0 0 0 0 0 1903 3338 9 3370 3396 8 3343 2309 0 0 t 0 0 0 0 0 0 0 0 0 0 593 2 170 19 0 195 30 254 0 0
AT1G71450_MA1233.1_JASPAR_rc_shift9 (AT1G71450:MA1233.1:JASPAR_rc)	0.728	0.400	0.893	0.910	0.912	896	1085	877	379	504	748.200	; assembly_13 versus AT1G71450_MA1233.1_JASPAR_rc (AT1G71450:MA1233.1:JASPAR_rc); m=179/229; ncol2=20; w=0; offset=0; strand=R; shift=9; score= 748.2; ---------yGrCGGyGrhG ; cor=0.728; Ncor=0.400; logoDP=0.893; NsEucl=0.910; NSW=0.912; rcor=896; rNcor=1085; rlogoDP=877; rNsEucl=379; rNSW=504; rank_mean=748.200; match_rank= a 0 0 0 0 0 0 0 0 0 96 20 159 43 14 24 78 65 153 166 72 c 0 0 0 0 0 0 0 0 0 189 3 24 445 4 14 238 5 38 205 24 g 0 0 0 0 0 0 0 0 0 9 526 290 5 526 507 3 463 340 32 406 t 0 0 0 0 0 0 0 0 0 274 19 95 75 24 23 249 35 37 165 66
DREB2A_MA1258.2_JASPAR_shift11 (DREB2A:MA1258.2:JASPAR)	0.707	0.579	4.783	0.879	0.868	1040	429	423	901	951	748.800	; assembly_13 versus DREB2A_MA1258.2_JASPAR (DREB2A:MA1258.2:JASPAR); m=180/229; ncol2=9; w=0; offset=2; strand=D; shift=11; score= 748.8; -----------rwGkCGGTG ; cor=0.707; Ncor=0.579; logoDP=4.783; NsEucl=0.879; NSW=0.868; rcor=1040; rNcor=429; rlogoDP=423; rNsEucl=901; rNSW=951; rank_mean=748.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 360 219 0 18 2 0 1 0 16 c 0 0 0 0 0 0 0 0 0 0 0 9 19 0 0 579 0 0 78 25 g 0 0 0 0 0 0 0 0 0 0 0 162 35 581 226 0 581 580 0 413 t 0 0 0 0 0 0 0 0 0 0 0 50 308 0 337 0 0 0 503 127
DREB2D_MA1250.2_JASPAR_rc_shift10 (DREB2D:MA1250.2:JASPAR_rc)	0.757	0.504	0.217	0.899	0.899	734	702	1053	612	661	752.400	; assembly_13 versus DREB2D_MA1250.2_JASPAR_rc (DREB2D:MA1250.2:JASPAR_rc); m=181/229; ncol2=14; w=0; offset=1; strand=R; shift=10; score= 752.4; ----------GgCGGYGGmg ; cor=0.757; Ncor=0.504; logoDP=0.217; NsEucl=0.899; NSW=0.899; rcor=734; rNcor=702; rlogoDP=1053; rNsEucl=612; rNSW=661; rank_mean=752.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 133 107 6 0 2 1 0 31 221 93 c 0 0 0 0 0 0 0 0 0 0 8 10 519 0 1 160 0 18 205 30 g 0 0 0 0 0 0 0 0 0 0 395 366 0 556 554 0 551 489 13 360 t 0 0 0 0 0 0 0 0 0 0 21 74 32 1 0 396 6 19 118 74
AT2G33710_MA1245.2_JASPAR_rc_shift8 (AT2G33710:MA1245.2:JASPAR_rc)	0.711	0.593	2.647	0.888	0.875	1013	372	699	801	893	755.600	; assembly_13 versus AT2G33710_MA1245.2_JASPAR_rc (AT2G33710:MA1245.2:JASPAR_rc); m=182/229; ncol2=11; w=-1; offset=-1; strand=R; shift=8; score= 755.6; --------ryGGCGGCGgh- ; cor=0.711; Ncor=0.593; logoDP=2.647; NsEucl=0.888; NSW=0.875; rcor=1013; rNcor=372; rlogoDP=699; rNsEucl=801; rNSW=893; rank_mean=755.600; match_rank= a 0 0 0 0 0 0 0 0 783 327 48 28 37 7 3 49 48 410 657 0 c 0 0 0 0 0 0 0 0 243 1264 3 14 2236 1 37 2173 33 361 895 0 g 0 0 0 0 0 0 0 0 1165 73 2406 2446 3 2449 2454 20 2246 1507 302 0 t 0 0 0 0 0 0 0 0 304 831 38 7 219 38 1 253 168 217 641 0
ERF3_MA1005.2_JASPAR_rc_shift8 (ERF3:MA1005.2:JASPAR_rc)	0.711	0.593	2.729	0.888	0.873	1009	370	690	809	911	757.800	; assembly_13 versus ERF3_MA1005.2_JASPAR_rc (ERF3:MA1005.2:JASPAR_rc); m=183/229; ncol2=11; w=-1; offset=-1; strand=R; shift=8; score= 757.8; --------ryGGCGGCGgh- ; cor=0.711; Ncor=0.593; logoDP=2.729; NsEucl=0.888; NSW=0.873; rcor=1009; rNcor=370; rlogoDP=690; rNsEucl=809; rNSW=911; rank_mean=757.800; match_rank= a 0 0 0 0 0 0 0 0 563 252 18 22 35 8 2 31 41 319 491 0 c 0 0 0 0 0 0 0 0 194 925 1 7 1697 1 3 1658 16 257 644 0 g 0 0 0 0 0 0 0 0 887 48 1852 1852 2 1844 1878 8 1713 1145 229 0 t 0 0 0 0 0 0 0 0 239 658 12 2 149 30 0 186 113 162 519 0
Zm00001d024324_MA1820.1_JASPAR_rc_shift9 (Zm00001d024324:MA1820.1:JASPAR_rc)	0.718	0.607	0.344	0.895	0.878	959	315	978	697	857	761.200	; assembly_13 versus Zm00001d024324_MA1820.1_JASPAR_rc (Zm00001d024324:MA1820.1:JASPAR_rc); m=184/229; ncol2=13; w=0; offset=0; strand=R; shift=9; score= 761.2; ---------cgGCGGCGGCG ; cor=0.718; Ncor=0.607; logoDP=0.344; NsEucl=0.895; NSW=0.878; rcor=959; rNcor=315; rlogoDP=978; rNsEucl=697; rNSW=857; rank_mean=761.200; match_rank= a 0 0 0 0 0 0 0 0 0 3206 2945 949 761 623 792 609 593 627 714 676 c 0 0 0 0 0 0 0 0 0 11092 5360 1113 20848 864 1100 21141 695 934 20748 959 g 0 0 0 0 0 0 0 0 0 5407 11929 19965 425 20733 20319 350 20957 20683 627 20536 t 0 0 0 0 0 0 0 0 0 3014 2485 692 685 499 508 619 474 475 630 548
EREB183_ZmPUCHI_B73_1_m1_EEAD0337_EEADannot_rc_shift11 (EREB183_ZmPUCHI_B73_1_m1:EEAD0337:EEADannot_rc)	0.793	0.420	0.281	0.897	0.904	538	1005	1016	655	599	762.600	; assembly_13 versus EREB183_ZmPUCHI_B73_1_m1_EEAD0337_EEADannot_rc (EREB183_ZmPUCHI_B73_1_m1:EEAD0337:EEADannot_rc); m=185/229; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 762.6; -----------GCGGCGGCG ; cor=0.793; Ncor=0.420; logoDP=0.281; NsEucl=0.897; NSW=0.904; rcor=538; rNcor=1005; rlogoDP=1016; rNsEucl=655; rNSW=599; rank_mean=762.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 17 2 2 4 2 2 9 5 5 c 0 0 0 0 0 0 0 0 0 0 0 5 88 4 1 92 2 8 76 1 g 0 0 0 0 0 0 0 0 0 0 0 70 4 92 92 0 94 77 7 92 t 0 0 0 0 0 0 0 0 0 0 0 8 6 2 3 6 2 6 12 2
ERF104_MA1239.1_JASPAR_rc_shift7 (ERF104:MA1239.1:JASPAR_rc)	0.747	0.432	0.955	0.903	0.896	787	951	864	536	681	763.800	; assembly_13 versus ERF104_MA1239.1_JASPAR_rc (ERF104:MA1239.1:JASPAR_rc); m=186/229; ncol2=19; w=-2; offset=-2; strand=R; shift=7; score= 763.8; -------rryGGCGGCGgmg ; cor=0.747; Ncor=0.432; logoDP=0.955; NsEucl=0.903; NSW=0.896; rcor=787; rNcor=951; rlogoDP=864; rNsEucl=536; rNSW=681; rank_mean=763.800; match_rank= a 0 0 0 0 0 0 0 149 192 62 0 89 3 0 0 25 5 90 169 75 c 0 0 0 0 0 0 0 60 51 281 0 0 527 0 2 496 6 76 213 33 g 0 0 0 0 0 0 0 218 274 0 553 466 0 557 555 0 464 369 50 363 t 0 0 0 0 0 0 0 130 40 214 4 2 27 0 0 36 82 22 125 86
RAP2.6_M0010_1.02_CISBP_rc_shift10 (RAP2.6:M0010_1.02:CISBP_rc)	0.748	0.544	0.190	0.889	0.901	778	552	1067	796	636	765.800	; assembly_13 versus RAP2.6_M0010_1.02_CISBP_rc (RAP2.6:M0010_1.02:CISBP_rc); m=187/229; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 765.8; ----------gmCgGCrs-- ; cor=0.748; Ncor=0.544; logoDP=0.190; NsEucl=0.889; NSW=0.901; rcor=778; rNcor=552; rlogoDP=1067; rNsEucl=796; rNSW=636; rank_mean=765.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 22 27 7 23 13 0 33 24 0 0 c 0 0 0 0 0 0 0 0 0 0 10 36 70 11 5 95 18 32 0 0 g 0 0 0 0 0 0 0 0 0 0 48 19 9 63 78 0 38 26 0 0 t 0 0 0 0 0 0 0 0 0 0 20 18 14 3 4 5 11 18 0 0
ERF1_ERF1_ArabidopsisPBM_rc_shift12 (ERF1:ERF1:ArabidopsisPBM_rc)	0.795	0.489	0.233	0.885	0.895	522	754	1046	834	695	770.200	; assembly_13 versus ERF1_ERF1_ArabidopsisPBM_rc (ERF1:ERF1:ArabidopsisPBM_rc); m=188/229; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 770.2; ------------tGGCGGCG ; cor=0.795; Ncor=0.489; logoDP=0.233; NsEucl=0.885; NSW=0.895; rcor=522; rNcor=754; rlogoDP=1046; rNsEucl=834; rNSW=695; rank_mean=770.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 13 1 3 1 1 1 1 2 c 0 0 0 0 0 0 0 0 0 0 0 0 24 1 2 97 0 2 97 1 g 0 0 0 0 0 0 0 0 0 0 0 0 5 97 90 0 95 96 1 82 t 0 0 0 0 0 0 0 0 0 0 0 0 58 1 5 2 4 1 1 15
EREB138_B73_1_m1_EEAD0331_EEADannot_rc_shift8 (EREB138_B73_1_m1:EEAD0331:EEADannot_rc)	0.726	0.532	0.234	0.901	0.891	904	596	1045	585	743	774.600	; assembly_13 versus EREB138_B73_1_m1_EEAD0331_EEADannot_rc (EREB138_B73_1_m1:EEAD0331:EEADannot_rc); m=189/229; ncol2=15; w=-1; offset=-1; strand=R; shift=8; score= 774.6; --------rcGgCGGCGGCG ; cor=0.726; Ncor=0.532; logoDP=0.234; NsEucl=0.901; NSW=0.891; rcor=904; rNcor=596; rlogoDP=1045; rNsEucl=585; rNSW=743; rank_mean=774.600; match_rank= a 0 0 0 0 0 0 0 0 30 14 6 21 8 3 17 4 1 16 0 7 c 0 0 0 0 0 0 0 0 8 62 10 9 71 0 2 88 0 3 90 1 g 0 0 0 0 0 0 0 0 44 12 77 60 2 97 78 0 97 78 2 91 t 0 0 0 0 0 0 0 0 18 12 7 10 19 0 3 8 2 3 8 1
Zm00001d049364_MA1833.1_JASPAR_rc_shift7 (Zm00001d049364:MA1833.1:JASPAR_rc)	0.719	0.494	2.759	0.895	0.879	953	736	687	691	850	783.400	; assembly_13 versus Zm00001d049364_MA1833.1_JASPAR_rc (Zm00001d049364:MA1833.1:JASPAR_rc); m=190/229; ncol2=16; w=-2; offset=-2; strand=R; shift=7; score= 783.4; -------ggyGGCGGCGGCg ; cor=0.719; Ncor=0.494; logoDP=2.759; NsEucl=0.895; NSW=0.879; rcor=953; rNcor=736; rlogoDP=687; rNsEucl=691; rNSW=850; rank_mean=783.400; match_rank= a 0 0 0 0 0 0 0 2459 3070 2162 624 544 559 516 441 525 510 424 681 2187 c 0 0 0 0 0 0 0 4550 4110 8879 1008 777 17121 612 593 17063 607 601 16187 2975 g 0 0 0 0 0 0 0 9497 9179 2765 16513 16869 321 17013 17272 366 17025 17229 1027 9771 t 0 0 0 0 0 0 0 2100 2247 4800 461 416 605 465 300 652 464 352 711 3673
AT5G18450_MA1226.1_JASPAR_shift4 (AT5G18450:MA1226.1:JASPAR)	0.713	0.445	4.668	0.891	0.880	995	910	431	764	838	787.600	; assembly_13 versus AT5G18450_MA1226.1_JASPAR (AT5G18450:MA1226.1:JASPAR); m=191/229; ncol2=15; w=-5; offset=-5; strand=D; shift=4; score= 787.6; ----ggyggarGCGGYGGm- ; cor=0.713; Ncor=0.445; logoDP=4.668; NsEucl=0.891; NSW=0.880; rcor=995; rNcor=910; rlogoDP=431; rNsEucl=764; rNSW=838; rank_mean=787.600; match_rank= a 0 0 0 0 95 88 137 84 98 304 185 34 21 0 0 25 0 54 237 0 c 0 0 0 0 41 54 179 49 42 133 0 0 509 0 0 156 0 38 156 0 g 0 0 0 0 357 371 58 312 386 12 395 531 0 587 587 0 584 491 50 0 t 0 0 0 0 94 74 213 142 61 138 7 22 57 0 0 406 3 4 144 0
EREB149_Mo17_1_EEAD0336_EEADannot_shift10 (EREB149_Mo17_1:EEAD0336:EEADannot)	0.722	0.481	3.928	0.887	0.873	932	776	521	813	916	791.600	; assembly_13 versus EREB149_Mo17_1_EEAD0336_EEADannot (EREB149_Mo17_1:EEAD0336:EEADannot); m=192/229; ncol2=14; w=0; offset=1; strand=D; shift=10; score= 791.6; ----------GGCGGCGGCG ; cor=0.722; Ncor=0.481; logoDP=3.928; NsEucl=0.887; NSW=0.873; rcor=932; rNcor=776; rlogoDP=521; rNsEucl=813; rNSW=916; rank_mean=791.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 3 17 4 6 12 5 1 12 6 4 c 0 0 0 0 0 0 0 0 0 0 4 0 86 0 2 82 0 3 86 0 g 0 0 0 0 0 0 0 0 0 0 85 79 1 90 84 1 97 83 2 95 t 0 0 0 0 0 0 0 0 0 0 8 4 9 4 2 12 2 2 6 1
Zm00001d049364_MA1833.2_JASPAR_rc_shift10 (Zm00001d049364:MA1833.2:JASPAR_rc)	0.726	0.605	0.325	0.887	0.872	903	323	992	818	923	791.800	; assembly_13 versus Zm00001d049364_MA1833.2_JASPAR_rc (Zm00001d049364:MA1833.2:JASPAR_rc); m=193/229; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 791.8; ----------GGCGGCGGCg ; cor=0.726; Ncor=0.605; logoDP=0.325; NsEucl=0.887; NSW=0.872; rcor=903; rNcor=323; rlogoDP=992; rNsEucl=818; rNSW=923; rank_mean=791.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 624 544 559 516 441 525 510 424 681 2187 c 0 0 0 0 0 0 0 0 0 0 1008 777 17121 612 593 17063 607 601 16187 2975 g 0 0 0 0 0 0 0 0 0 0 16513 16869 321 17013 17272 366 17025 17229 1027 9771 t 0 0 0 0 0 0 0 0 0 0 461 416 605 465 300 652 464 352 711 3673
Zm00001d024324_MA1820.2_JASPAR_rc_shift11 (Zm00001d024324:MA1820.2:JASPAR_rc)	0.741	0.606	0.341	0.878	0.867	809	319	979	905	956	793.600	; assembly_13 versus Zm00001d024324_MA1820.2_JASPAR_rc (Zm00001d024324:MA1820.2:JASPAR_rc); m=194/229; ncol2=9; w=0; offset=2; strand=R; shift=11; score= 793.6; -----------GCGGCGGCG ; cor=0.741; Ncor=0.606; logoDP=0.341; NsEucl=0.878; NSW=0.867; rcor=809; rNcor=319; rlogoDP=979; rNsEucl=905; rNSW=956; rank_mean=793.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 949 761 623 792 609 593 627 714 676 c 0 0 0 0 0 0 0 0 0 0 0 1113 20848 864 1100 21141 695 934 20748 959 g 0 0 0 0 0 0 0 0 0 0 0 19965 425 20733 20319 350 20957 20683 627 20536 t 0 0 0 0 0 0 0 0 0 0 0 692 685 499 508 619 474 475 630 548
RAP2.6_RAP2.6_3_ArabidopsisPBM_shift7 (RAP2.6:RAP2.6_3:ArabidopsisPBM)	0.736	0.453	3.766	0.880	0.885	846	883	551	891	798	793.800	; assembly_13 versus RAP2.6_RAP2.6_3_ArabidopsisPBM (RAP2.6:RAP2.6_3:ArabidopsisPBM); m=195/229; ncol2=10; w=-2; offset=-2; strand=D; shift=7; score= 793.8; -------cATGACGGCw--- ; cor=0.736; Ncor=0.453; logoDP=3.766; NsEucl=0.880; NSW=0.885; rcor=846; rNcor=883; rlogoDP=551; rNsEucl=891; rNSW=798; rank_mean=793.800; match_rank= a 0 0 0 0 0 0 0 22 69 14 14 68 1 0 1 1 50 0 0 0 c 0 0 0 0 0 0 0 50 9 2 1 8 98 1 1 96 16 0 0 0 g 0 0 0 0 0 0 0 9 8 13 72 7 0 96 97 0 2 0 0 0 t 0 0 0 0 0 0 0 19 14 71 13 17 1 3 1 3 32 0 0 0
RAP2.3_RAP2.3_2_ArabidopsisPBM_rc_shift11 (RAP2.3:RAP2.3_2:ArabidopsisPBM_rc)	0.707	0.530	3.493	0.882	0.875	1045	598	581	867	890	796.200	; assembly_13 versus RAP2.3_RAP2.3_2_ArabidopsisPBM_rc (RAP2.3:RAP2.3_2:ArabidopsisPBM_rc); m=196/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 796.2; -----------wtkGCGGCk ; cor=0.707; Ncor=0.530; logoDP=3.493; NsEucl=0.882; NSW=0.875; rcor=1045; rNcor=598; rlogoDP=581; rNsEucl=867; rNSW=890; rank_mean=796.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 36 20 4 8 1 0 1 0 6 c 0 0 0 0 0 0 0 0 0 0 0 9 11 1 3 97 1 3 99 3 g 0 0 0 0 0 0 0 0 0 0 0 17 7 67 87 1 98 96 1 57 t 0 0 0 0 0 0 0 0 0 0 0 38 62 28 2 1 1 0 0 34
RRTF1_RRTF1_3_ArabidopsisPBM_rc_shift11 (RRTF1:RRTF1_3:ArabidopsisPBM_rc)	0.716	0.537	3.976	0.876	0.862	969	579	518	928	991	797.000	; assembly_13 versus RRTF1_RRTF1_3_ArabidopsisPBM_rc (RRTF1:RRTF1_3:ArabidopsisPBM_rc); m=197/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 797; -----------aTGGCGGCG ; cor=0.716; Ncor=0.537; logoDP=3.976; NsEucl=0.876; NSW=0.862; rcor=969; rNcor=579; rlogoDP=518; rNsEucl=928; rNSW=991; rank_mean=797.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 67 7 6 11 0 1 0 1 1 c 0 0 0 0 0 0 0 0 0 0 0 3 8 0 1 98 0 3 99 2 g 0 0 0 0 0 0 0 0 0 0 0 8 4 77 81 1 97 97 0 92 t 0 0 0 0 0 0 0 0 0 0 0 22 81 17 7 1 2 0 0 5
LBD19_IG1_AS2_Mo17_1_EEAD0422_EEADannot_rc_shift4 (LBD19_IG1_AS2_Mo17_1:EEAD0422:EEADannot_rc)	0.721	0.451	3.014	0.893	0.885	940	889	640	735	807	802.200	; assembly_13 versus LBD19_IG1_AS2_Mo17_1_EEAD0422_EEADannot_rc (LBD19_IG1_AS2_Mo17_1:EEAD0422:EEADannot_rc); m=198/229; ncol2=15; w=-5; offset=-5; strand=R; shift=4; score= 802.2; ----GGCGGCGGCGGCGGc- ; cor=0.721; Ncor=0.451; logoDP=3.014; NsEucl=0.893; NSW=0.885; rcor=940; rNcor=889; rlogoDP=640; rNsEucl=735; rNSW=807; rank_mean=802.200; match_rank= a 0 0 0 0 4 3 6 0 7 15 6 7 17 3 11 12 1 4 17 0 c 0 0 0 0 10 10 94 0 7 72 4 4 74 1 6 80 0 6 63 0 g 0 0 0 0 79 87 0 100 82 5 86 86 4 93 80 2 99 88 15 0 t 0 0 0 0 7 0 0 0 4 8 4 3 5 3 3 6 0 2 5 0
EREB183_ZmPUCHI_Mo17_1_EEAD0338_EEADannot_rc_shift11 (EREB183_ZmPUCHI_Mo17_1:EEAD0338:EEADannot_rc)	0.784	0.415	0.332	0.892	0.894	584	1018	985	752	704	808.600	; assembly_13 versus EREB183_ZmPUCHI_Mo17_1_EEAD0338_EEADannot_rc (EREB183_ZmPUCHI_Mo17_1:EEAD0338:EEADannot_rc); m=199/229; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 808.6; -----------GCGGCGGCG ; cor=0.784; Ncor=0.415; logoDP=0.332; NsEucl=0.892; NSW=0.894; rcor=584; rNcor=1018; rlogoDP=985; rNsEucl=752; rNSW=704; rank_mean=808.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 15 4 3 9 2 2 5 4 3 c 0 0 0 0 0 0 0 0 0 0 0 4 84 0 1 94 0 0 84 0 g 0 0 0 0 0 0 0 0 0 0 0 69 4 93 88 0 97 90 3 95 t 0 0 0 0 0 0 0 0 0 0 0 12 8 4 2 4 1 5 9 2
EREB46_ZmSHINE_B73_1_m1_EEAD0349_EEADannot_shift10 (EREB46_ZmSHINE_B73_1_m1:EEAD0349:EEADannot)	0.718	0.449	3.916	0.889	0.876	957	895	524	793	877	809.200	; assembly_13 versus EREB46_ZmSHINE_B73_1_m1_EEAD0349_EEADannot (EREB46_ZmSHINE_B73_1_m1:EEAD0349:EEADannot); m=200/229; ncol2=15; w=0; offset=1; strand=D; shift=10; score= 809.2; ----------GGCGGCGGCG ; cor=0.718; Ncor=0.449; logoDP=3.916; NsEucl=0.889; NSW=0.876; rcor=957; rNcor=895; rlogoDP=524; rNsEucl=793; rNSW=877; rank_mean=809.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 7 13 9 2 9 5 1 6 9 2 c 0 0 0 0 0 0 0 0 0 0 9 0 77 0 3 71 0 2 77 2 g 0 0 0 0 0 0 0 0 0 0 79 82 1 95 83 3 99 88 2 96 t 0 0 0 0 0 0 0 0 0 0 5 5 13 3 5 21 0 4 12 0
ERF112_MA1245.3_JASPAR_rc_shift9 (ERF112:MA1245.3:JASPAR_rc)	0.711	0.582	2.645	0.876	0.862	1014	421	700	929	992	811.200	; assembly_13 versus ERF112_MA1245.3_JASPAR_rc (ERF112:MA1245.3:JASPAR_rc); m=201/229; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 811.2; ---------yGGCGGCGg-- ; cor=0.711; Ncor=0.582; logoDP=2.645; NsEucl=0.876; NSW=0.862; rcor=1014; rNcor=421; rlogoDP=700; rNsEucl=929; rNSW=992; rank_mean=811.200; match_rank= a 0 0 0 0 0 0 0 0 0 327 48 28 37 7 3 49 48 410 0 0 c 0 0 0 0 0 0 0 0 0 1264 3 14 2236 1 37 2173 33 361 0 0 g 0 0 0 0 0 0 0 0 0 73 2406 2446 3 2449 2454 20 2246 1507 0 0 t 0 0 0 0 0 0 0 0 0 831 38 7 219 38 1 253 168 217 0 0
ETHYLENE_1gcc_A_3D-footprint_shift12 (ETHYLENE:1gcc_A:3D-footprint)	0.732	0.488	4.752	0.867	0.857	873	764	424	987	1010	811.600	; assembly_13 versus ETHYLENE_1gcc_A_3D-footprint (ETHYLENE:1gcc_A:3D-footprint); m=202/229; ncol2=9; w=0; offset=3; strand=D; shift=12; score= 811.6; ------------TGGCGGCT ; cor=0.732; Ncor=0.488; logoDP=4.752; NsEucl=0.867; NSW=0.857; rcor=873; rNcor=764; rlogoDP=424; rNsEucl=987; rNSW=1010; rank_mean=811.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 8 0 8 0 0 0 0 8 c 0 0 0 0 0 0 0 0 0 0 0 0 8 0 8 96 0 0 96 0 g 0 0 0 0 0 0 0 0 0 0 0 0 8 96 72 0 96 96 0 8 t 0 0 0 0 0 0 0 0 0 0 0 0 72 0 8 0 0 0 0 80
ERF082_MA1005.3_JASPAR_rc_shift9 (ERF082:MA1005.3:JASPAR_rc)	0.711	0.582	2.727	0.875	0.860	1012	420	691	941	1001	813.000	; assembly_13 versus ERF082_MA1005.3_JASPAR_rc (ERF082:MA1005.3:JASPAR_rc); m=203/229; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 813; ---------yGGCGGCGg-- ; cor=0.711; Ncor=0.582; logoDP=2.727; NsEucl=0.875; NSW=0.860; rcor=1012; rNcor=420; rlogoDP=691; rNsEucl=941; rNSW=1001; rank_mean=813.000; match_rank= a 0 0 0 0 0 0 0 0 0 252 18 22 35 8 2 31 41 319 0 0 c 0 0 0 0 0 0 0 0 0 925 1 7 1697 1 3 1658 16 257 0 0 g 0 0 0 0 0 0 0 0 0 48 1852 1852 2 1844 1878 8 1713 1145 0 0 t 0 0 0 0 0 0 0 0 0 658 12 2 149 30 0 186 113 162 0 0
AT5G51190_M0040_1.02_CISBP_rc_shift12 (AT5G51190:M0040_1.02:CISBP_rc)	0.718	0.522	3.937	0.866	0.857	962	632	520	988	1011	822.600	; assembly_13 versus AT5G51190_M0040_1.02_CISBP_rc (AT5G51190:M0040_1.02:CISBP_rc); m=204/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 822.6; ------------CGCCGGCm ; cor=0.718; Ncor=0.522; logoDP=3.937; NsEucl=0.866; NSW=0.857; rcor=962; rNcor=632; rlogoDP=520; rNsEucl=988; rNSW=1011; rank_mean=822.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 62 c 0 0 0 0 0 0 0 0 0 0 0 0 70 0 86 100 7 0 100 25 g 0 0 0 0 0 0 0 0 0 0 0 0 10 100 14 0 93 100 0 13 t 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0
NAC74_Mo17_1_EEAD0488_EEADannot_rc_shift7 (NAC74_Mo17_1:EEAD0488:EEADannot_rc)	0.735	0.509	0.208	0.890	0.891	854	689	1055	774	744	823.200	; assembly_13 versus NAC74_Mo17_1_EEAD0488_EEADannot_rc (NAC74_Mo17_1:EEAD0488:EEADannot_rc); m=205/229; ncol2=11; w=-2; offset=-2; strand=R; shift=7; score= 823.2; -------grCGrYGsCGk-- ; cor=0.735; Ncor=0.509; logoDP=0.208; NsEucl=0.890; NSW=0.891; rcor=854; rNcor=689; rlogoDP=1055; rNsEucl=774; rNSW=744; rank_mean=823.200; match_rank= a 0 0 0 0 0 0 0 12 32 10 14 44 0 6 22 0 0 11 0 0 c 0 0 0 0 0 0 0 18 13 82 0 1 75 0 31 93 0 5 0 0 g 0 0 0 0 0 0 0 59 42 3 86 55 0 94 45 1 100 40 0 0 t 0 0 0 0 0 0 0 11 13 5 0 0 25 0 2 6 0 44 0 0
ERF105_MA1000.1_JASPAR_rc_shift12 (ERF105:MA1000.1:JASPAR_rc)	0.718	0.522	3.854	0.867	0.858	960	631	535	983	1007	823.200	; assembly_13 versus ERF105_MA1000.1_JASPAR_rc (ERF105:MA1000.1:JASPAR_rc); m=206/229; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 823.2; ------------CGCCGGCm ; cor=0.718; Ncor=0.522; logoDP=3.854; NsEucl=0.867; NSW=0.858; rcor=960; rNcor=631; rlogoDP=535; rNsEucl=983; rNSW=1007; rank_mean=823.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 101 1 1 1 1 1 1 623 c 0 0 0 0 0 0 0 0 0 0 0 0 698 1 855 998 72 1 998 250 g 0 0 0 0 0 0 0 0 0 0 0 0 101 998 143 1 927 998 1 126 t 0 0 0 0 0 0 0 0 0 0 0 0 101 1 1 1 1 1 1 1
ERF017_MA1234.2_JASPAR_shift8 (ERF017:MA1234.2:JASPAR)	0.718	0.479	4.094	0.872	0.869	954	786	505	959	942	829.200	; assembly_13 versus ERF017_MA1234.2_JASPAR (ERF017:MA1234.2:JASPAR); m=207/229; ncol2=9; w=-1; offset=-1; strand=D; shift=8; score= 829.2; --------tgGwCGGyG--- ; cor=0.718; Ncor=0.479; logoDP=4.094; NsEucl=0.872; NSW=0.869; rcor=954; rNcor=786; rlogoDP=505; rNsEucl=959; rNSW=942; rank_mean=829.200; match_rank= a 0 0 0 0 0 0 0 0 127 47 0 291 0 0 0 43 27 0 0 0 c 0 0 0 0 0 0 0 0 34 19 0 79 599 0 0 185 9 0 0 0 g 0 0 0 0 0 0 0 0 53 403 599 42 0 599 599 0 524 0 0 0 t 0 0 0 0 0 0 0 0 385 130 0 187 0 0 0 371 39 0 0 0
ERF076_MA1001.4_JASPAR_rc_shift11 (ERF076:MA1001.4:JASPAR_rc)	0.711	0.534	3.090	0.876	0.861	1007	589	630	937	998	832.200	; assembly_13 versus ERF076_MA1001.4_JASPAR_rc (ERF076:MA1001.4:JASPAR_rc); m=208/229; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 832.2; -----------GyGGCGGCG ; cor=0.711; Ncor=0.534; logoDP=3.090; NsEucl=0.876; NSW=0.861; rcor=1007; rNcor=589; rlogoDP=630; rNsEucl=937; rNSW=998; rank_mean=832.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 157 81 18 74 24 6 9 38 109 c 0 0 0 0 0 0 0 0 0 0 0 45 435 11 9 1271 5 13 1270 63 g 0 0 0 0 0 0 0 0 0 0 0 1086 5 1304 1281 2 1346 1347 6 1008 t 0 0 0 0 0 0 0 0 0 0 0 85 852 40 9 76 16 4 59 193
EREB145_ZmSHINE_B73_1_m1_EEAD0333_EEADannot_rc_shift11 (EREB145_ZmSHINE_B73_1_m1:EEAD0333:EEADannot_rc)	0.748	0.449	3.383	0.877	0.863	779	894	594	921	989	835.400	; assembly_13 versus EREB145_ZmSHINE_B73_1_m1_EEAD0333_EEADannot_rc (EREB145_ZmSHINE_B73_1_m1:EEAD0333:EEADannot_rc); m=209/229; ncol2=13; w=0; offset=2; strand=R; shift=11; score= 835.4; -----------GCGGCGGCG ; cor=0.748; Ncor=0.449; logoDP=3.383; NsEucl=0.877; NSW=0.863; rcor=779; rNcor=894; rlogoDP=594; rNsEucl=921; rNSW=989; rank_mean=835.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 2 0 1 3 0 4 6 2 c 0 0 0 0 0 0 0 0 0 0 0 0 90 0 1 83 0 3 87 1 g 0 0 0 0 0 0 0 0 0 0 0 92 1 99 96 0 100 92 1 96 t 0 0 0 0 0 0 0 0 0 0 0 2 7 1 2 14 0 1 6 1
EREB4_Mo17_1_EEAD0354_EEADannot_rc_shift11 (EREB4_Mo17_1:EEAD0354:EEADannot_rc)	0.759	0.402	0.304	0.892	0.895	718	1074	999	741	692	844.800	; assembly_13 versus EREB4_Mo17_1_EEAD0354_EEADannot_rc (EREB4_Mo17_1:EEAD0354:EEADannot_rc); m=210/229; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 844.8; -----------gyGkCGGyG ; cor=0.759; Ncor=0.402; logoDP=0.304; NsEucl=0.892; NSW=0.895; rcor=718; rNcor=1074; rlogoDP=999; rNsEucl=741; rNSW=692; rank_mean=844.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 20 11 2 12 1 1 2 5 0 c 0 0 0 0 0 0 0 0 0 0 0 12 50 0 1 93 0 0 42 0 g 0 0 0 0 0 0 0 0 0 0 0 57 2 98 59 1 99 97 0 100 t 0 0 0 0 0 0 0 0 0 0 0 11 37 0 28 5 0 1 53 0
CRF4_MA0976.3_JASPAR_rc_shift8 (CRF4:MA0976.3:JASPAR_rc)	0.706	0.529	2.790	0.877	0.863	1055	601	681	917	985	847.800	; assembly_13 versus CRF4_MA0976.3_JASPAR_rc (CRF4:MA0976.3:JASPAR_rc); m=211/229; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 847.8; --------GyGGCGGCGg-- ; cor=0.706; Ncor=0.529; logoDP=2.790; NsEucl=0.877; NSW=0.863; rcor=1055; rNcor=601; rlogoDP=681; rNsEucl=917; rNSW=985; rank_mean=847.800; match_rank= a 0 0 0 0 0 0 0 0 134 131 25 87 51 9 9 63 163 321 0 0 c 0 0 0 0 0 0 0 0 40 653 16 9 1734 15 22 1744 111 247 0 0 g 0 0 0 0 0 0 0 0 1659 12 1804 1794 2 1866 1865 4 1377 1167 0 0 t 0 0 0 0 0 0 0 0 67 1104 55 10 113 10 4 89 249 165 0 0
AT3G23230_M0024_1.02_CISBP_rc_shift10 (AT3G23230:M0024_1.02:CISBP_rc)	0.713	0.519	0.264	0.883	0.890	990	645	1031	856	754	855.200	; assembly_13 versus AT3G23230_M0024_1.02_CISBP_rc (AT3G23230:M0024_1.02:CISBP_rc); m=212/229; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 855.2; ----------GgCGGCks-- ; cor=0.713; Ncor=0.519; logoDP=0.264; NsEucl=0.883; NSW=0.890; rcor=990; rNcor=645; rlogoDP=1031; rNsEucl=856; rNSW=754; rank_mean=855.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 10 19 1 7 6 4 17 20 0 0 c 0 0 0 0 0 0 0 0 0 0 10 17 76 1 16 80 22 27 0 0 g 0 0 0 0 0 0 0 0 0 0 68 45 4 77 75 6 36 32 0 0 t 0 0 0 0 0 0 0 0 0 0 12 19 19 15 3 10 25 21 0 0
DEAR4_DEAR4_2_ArabidopsisPBM_rc_shift12 (DEAR4:DEAR4_2:ArabidopsisPBM_rc)	0.749	0.461	0.639	0.878	0.881	774	850	913	906	835	855.600	; assembly_13 versus DEAR4_DEAR4_2_ArabidopsisPBM_rc (DEAR4:DEAR4_2:ArabidopsisPBM_rc); m=213/229; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 855.6; ------------aGGCGGCG ; cor=0.749; Ncor=0.461; logoDP=0.639; NsEucl=0.878; NSW=0.881; rcor=774; rNcor=850; rlogoDP=913; rNsEucl=906; rNSW=835; rank_mean=855.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 61 9 7 3 1 0 1 2 c 0 0 0 0 0 0 0 0 0 0 0 0 15 2 9 95 1 8 87 2 g 0 0 0 0 0 0 0 0 0 0 0 0 20 86 83 1 98 91 0 94 t 0 0 0 0 0 0 0 0 0 0 0 0 4 3 1 1 0 1 12 2
CRF2_M0029_1.02_CISBP_rc_shift10 (CRF2:M0029_1.02:CISBP_rc)	0.742	0.540	0.267	0.872	0.870	805	570	1025	956	935	858.200	; assembly_13 versus CRF2_M0029_1.02_CISBP_rc (CRF2:M0029_1.02:CISBP_rc); m=214/229; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 858.2; ----------GGCGGCGs-- ; cor=0.742; Ncor=0.540; logoDP=0.267; NsEucl=0.872; NSW=0.870; rcor=805; rNcor=570; rlogoDP=1025; rNsEucl=956; rNSW=935; rank_mean=858.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 3 13 0 0 c 0 0 0 0 0 0 0 0 0 0 6 0 100 0 2 100 8 35 0 0 g 0 0 0 0 0 0 0 0 0 0 73 93 0 100 98 0 78 48 0 0 t 0 0 0 0 0 0 0 0 0 0 12 2 0 0 0 0 11 4 0 0
ERF098_MA0999.1_JASPAR_rc_shift10 (ERF098:MA0999.1:JASPAR_rc)	0.712	0.518	0.266	0.883	0.890	1000	653	1026	860	756	859.000	; assembly_13 versus ERF098_MA0999.1_JASPAR_rc (ERF098:MA0999.1:JASPAR_rc); m=215/229; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 859; ----------ggCGGCgs-- ; cor=0.712; Ncor=0.518; logoDP=0.266; NsEucl=0.883; NSW=0.890; rcor=1000; rNcor=653; rlogoDP=1026; rNsEucl=860; rNSW=756; rank_mean=859.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 98 192 13 70 62 37 173 198 0 0 c 0 0 0 0 0 0 0 0 0 0 99 170 756 10 166 804 222 270 0 0 g 0 0 0 0 0 0 0 0 0 0 677 448 39 769 746 63 356 317 0 0 t 0 0 0 0 0 0 0 0 0 0 125 190 192 151 26 96 248 215 0 0
CRF2_MA0975.1_JASPAR_rc_shift10 (CRF2:MA0975.1:JASPAR_rc)	0.741	0.539	0.270	0.872	0.869	810	573	1023	961	944	862.200	; assembly_13 versus CRF2_MA0975.1_JASPAR_rc (CRF2:MA0975.1:JASPAR_rc); m=216/229; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 862.2; ----------GGCGGCGs-- ; cor=0.741; Ncor=0.539; logoDP=0.270; NsEucl=0.872; NSW=0.869; rcor=810; rNcor=573; rlogoDP=1023; rNsEucl=961; rNSW=944; rank_mean=862.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 88 46 0 0 0 0 27 131 0 0 c 0 0 0 0 0 0 0 0 0 0 59 0 999 0 23 999 81 348 0 0 g 0 0 0 0 0 0 0 0 0 0 735 931 0 999 977 0 783 478 0 0 t 0 0 0 0 0 0 0 0 0 0 118 23 0 0 0 0 108 44 0 0
CRF4_M0033_1.02_CISBP_rc_shift10 (CRF4:M0033_1.02:CISBP_rc)	0.733	0.533	0.312	0.872	0.870	864	590	996	955	934	867.800	; assembly_13 versus CRF4_M0033_1.02_CISBP_rc (CRF4:M0033_1.02:CISBP_rc); m=217/229; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 867.8; ----------GGCGGCGs-- ; cor=0.733; Ncor=0.533; logoDP=0.312; NsEucl=0.872; NSW=0.870; rcor=864; rNcor=590; rlogoDP=996; rNsEucl=955; rNSW=934; rank_mean=867.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 6 7 0 0 c 0 0 0 0 0 0 0 0 0 0 6 6 99 0 3 100 6 53 0 0 g 0 0 0 0 0 0 0 0 0 0 79 76 1 100 97 0 77 33 0 0 t 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 11 7 0 0
CRF4_MA0976.1_JASPAR_rc_shift10 (CRF4:MA0976.1:JASPAR_rc)	0.732	0.533	0.313	0.872	0.869	872	594	995	958	938	871.400	; assembly_13 versus CRF4_MA0976.1_JASPAR_rc (CRF4:MA0976.1:JASPAR_rc); m=218/229; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 871.4; ----------GGCGGCGs-- ; cor=0.732; Ncor=0.533; logoDP=0.313; NsEucl=0.872; NSW=0.869; rcor=872; rNcor=594; rlogoDP=995; rNsEucl=958; rNSW=938; rank_mean=871.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 49 108 0 0 0 0 62 70 0 0 c 0 0 0 0 0 0 0 0 0 0 65 68 987 0 25 1000 62 535 0 0 g 0 0 0 0 0 0 0 0 0 0 790 756 13 1000 974 0 769 326 0 0 t 0 0 0 0 0 0 0 0 0 0 97 68 0 0 0 0 108 70 0 0
DREB2G_MA1226.2_JASPAR_shift4 (DREB2G:MA1226.2:JASPAR)	0.712	0.400	4.667	0.879	0.868	1006	1087	432	900	949	874.800	; assembly_13 versus DREB2G_MA1226.2_JASPAR (DREB2G:MA1226.2:JASPAR); m=219/229; ncol2=14; w=-5; offset=-5; strand=D; shift=4; score= 874.8; ----ggyggarGCGGYGG-- ; cor=0.712; Ncor=0.400; logoDP=4.667; NsEucl=0.879; NSW=0.868; rcor=1006; rNcor=1087; rlogoDP=432; rNsEucl=900; rNSW=949; rank_mean=874.800; match_rank= a 0 0 0 0 95 88 137 84 98 304 185 34 21 0 0 25 0 54 0 0 c 0 0 0 0 41 54 179 49 42 133 0 0 509 0 0 156 0 38 0 0 g 0 0 0 0 357 371 58 312 386 12 395 531 0 587 587 0 584 491 0 0 t 0 0 0 0 94 74 213 142 61 138 7 22 57 0 0 406 3 4 0 0
EREB145_ZmSHINE_Mo17_1_EEAD0334_EEADannot_rc_shift11 (EREB145_ZmSHINE_Mo17_1:EEAD0334:EEADannot_rc)	0.769	0.407	0.339	0.885	0.881	672	1050	980	836	836	874.800	; assembly_13 versus EREB145_ZmSHINE_Mo17_1_EEAD0334_EEADannot_rc (EREB145_ZmSHINE_Mo17_1:EEAD0334:EEADannot_rc); m=220/229; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 874.8; -----------GCGGCGGCG ; cor=0.769; Ncor=0.407; logoDP=0.339; NsEucl=0.885; NSW=0.881; rcor=672; rNcor=1050; rlogoDP=980; rNsEucl=836; rNSW=836; rank_mean=874.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 12 6 1 4 2 0 3 5 0 c 0 0 0 0 0 0 0 0 0 0 0 2 83 0 0 86 1 2 83 1 g 0 0 0 0 0 0 0 0 0 0 0 80 4 98 94 0 99 93 3 98 t 0 0 0 0 0 0 0 0 0 0 0 6 7 1 2 12 0 2 9 1
ORA47_ORA47_2_ArabidopsisPBM_rc_shift12 (ORA47:ORA47_2:ArabidopsisPBM_rc)	0.741	0.456	0.538	0.876	0.877	807	867	938	930	866	881.600	; assembly_13 versus ORA47_ORA47_2_ArabidopsisPBM_rc (ORA47:ORA47_2:ArabidopsisPBM_rc); m=221/229; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 881.6; ------------rGkCGGCG ; cor=0.741; Ncor=0.456; logoDP=0.538; NsEucl=0.876; NSW=0.877; rcor=807; rNcor=867; rlogoDP=938; rNsEucl=930; rNSW=866; rank_mean=881.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 42 2 5 1 0 0 0 4 c 0 0 0 0 0 0 0 0 0 0 0 0 12 1 5 98 1 3 92 2 g 0 0 0 0 0 0 0 0 0 0 0 0 25 93 65 0 98 97 1 93 t 0 0 0 0 0 0 0 0 0 0 0 0 21 4 25 1 1 0 7 1
RAP2.2_M0021_1.02_CISBP_rc_shift13 (RAP2.2:M0021_1.02:CISBP_rc)	0.721	0.420	0.094	0.886	0.908	942	1004	1082	832	548	881.600	; assembly_13 versus RAP2.2_M0021_1.02_CISBP_rc (RAP2.2:M0021_1.02:CISBP_rc); m=222/229; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 881.6; -------------gsCrscm ; cor=0.721; Ncor=0.420; logoDP=0.094; NsEucl=0.886; NSW=0.908; rcor=942; rNcor=1004; rlogoDP=1082; rNsEucl=832; rNSW=548; rank_mean=881.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 19 24 1 33 14 13 28 c 0 0 0 0 0 0 0 0 0 0 0 0 0 23 28 78 0 25 58 26 g 0 0 0 0 0 0 0 0 0 0 0 0 0 35 33 0 66 50 7 22 t 0 0 0 0 0 0 0 0 0 0 0 0 0 23 15 21 1 11 22 24
RAP2.3_RAP2.3_ArabidopsisPBM_rc_shift12 (RAP2.3:RAP2.3:ArabidopsisPBM_rc)	0.726	0.447	0.400	0.880	0.885	901	905	961	892	799	891.600	; assembly_13 versus RAP2.3_RAP2.3_ArabidopsisPBM_rc (RAP2.3:RAP2.3:ArabidopsisPBM_rc); m=223/229; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 891.6; ------------wkGCGGCG ; cor=0.726; Ncor=0.447; logoDP=0.400; NsEucl=0.880; NSW=0.885; rcor=901; rNcor=905; rlogoDP=961; rNsEucl=892; rNSW=799; rank_mean=891.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 25 7 8 1 0 0 0 6 c 0 0 0 0 0 0 0 0 0 0 0 0 17 1 3 98 0 24 98 3 g 0 0 0 0 0 0 0 0 0 0 0 0 9 66 78 0 98 75 1 76 t 0 0 0 0 0 0 0 0 0 0 0 0 49 26 11 1 2 1 1 15
MYB1_MA1179.2_JASPAR_rc_shift9 (MYB1:MA1179.2:JASPAR_rc)	0.740	0.471	0.202	0.867	0.876	814	824	1058	985	886	913.400	; assembly_13 versus MYB1_MA1179.2_JASPAR_rc (MYB1:MA1179.2:JASPAR_rc); m=224/229; ncol2=7; w=0; offset=0; strand=R; shift=9; score= 913.4; ---------wAACsGt---- ; cor=0.740; Ncor=0.471; logoDP=0.202; NsEucl=0.867; NSW=0.876; rcor=814; rNcor=824; rlogoDP=1058; rNsEucl=985; rNSW=886; rank_mean=913.400; match_rank= a 0 0 0 0 0 0 0 0 0 39 144 144 0 0 0 16 0 0 0 0 c 0 0 0 0 0 0 0 0 0 8 0 0 144 52 0 32 0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 89 144 1 0 0 0 0 t 0 0 0 0 0 0 0 0 0 97 0 0 0 3 0 95 0 0 0 0
LBD16_RA2_Mo17_1_EEAD0420_EEADannot_rc_shift10 (LBD16_RA2_Mo17_1:EEAD0420:EEADannot_rc)	0.702	0.439	3.255	0.876	0.847	1080	930	614	926	1048	919.600	; assembly_13 versus LBD16_RA2_Mo17_1_EEAD0420_EEADannot_rc (LBD16_RA2_Mo17_1:EEAD0420:EEADannot_rc); m=225/229; ncol2=15; w=0; offset=1; strand=R; shift=10; score= 919.6; ----------GGCGGCGGCG ; cor=0.702; Ncor=0.439; logoDP=3.255; NsEucl=0.876; NSW=0.847; rcor=1080; rNcor=930; rlogoDP=614; rNsEucl=926; rNSW=1048; rank_mean=919.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 6 1 2 1 3 9 2 0 8 0 c 0 0 0 0 0 0 0 0 0 0 6 9 98 1 14 86 0 2 87 1 g 0 0 0 0 0 0 0 0 0 0 84 90 0 96 81 3 97 98 3 97 t 0 0 0 0 0 0 0 0 0 0 4 0 0 2 2 2 1 0 2 2
RRTF1_RRTF1_ArabidopsisPBM_rc_shift12 (RRTF1:RRTF1:ArabidopsisPBM_rc)	0.730	0.449	0.639	0.871	0.868	878	891	912	967	952	920.000	; assembly_13 versus RRTF1_RRTF1_ArabidopsisPBM_rc (RRTF1:RRTF1:ArabidopsisPBM_rc); m=226/229; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 920; ------------TGGCGGCG ; cor=0.730; Ncor=0.449; logoDP=0.639; NsEucl=0.871; NSW=0.868; rcor=878; rNcor=891; rlogoDP=912; rNsEucl=967; rNSW=952; rank_mean=920.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 8 2 9 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 21 0 1 99 1 17 99 1 g 0 0 0 0 0 0 0 0 0 0 0 0 2 77 86 1 98 83 1 94 t 0 0 0 0 0 0 0 0 0 0 0 0 69 21 4 0 1 0 0 5
CRF4_MA0976.2_JASPAR_rc_shift6 (CRF4:MA0976.2:JASPAR_rc)	0.706	0.454	1.637	0.877	0.863	1055	878	778	917	985	922.600	; assembly_13 versus CRF4_MA0976.2_JASPAR_rc (CRF4:MA0976.2:JASPAR_rc); m=227/229; ncol2=12; w=-3; offset=-3; strand=R; shift=6; score= 922.6; ------ygGyGGCGGCGg-- ; cor=0.706; Ncor=0.454; logoDP=1.637; NsEucl=0.877; NSW=0.863; rcor=1055; rNcor=878; rlogoDP=778; rNsEucl=917; rNSW=985; rank_mean=922.600; match_rank= a 0 0 0 0 0 0 363 369 134 131 25 87 51 9 9 63 163 321 0 0 c 0 0 0 0 0 0 757 198 40 653 16 9 1734 15 22 1744 111 247 0 0 g 0 0 0 0 0 0 168 1002 1659 12 1804 1794 2 1866 1865 4 1377 1167 0 0 t 0 0 0 0 0 0 612 331 67 1104 55 10 113 10 4 89 249 165 0 0
NAC035_MA2046.2_JASPAR_shift10 (NAC035:MA2046.2:JASPAR)	0.700	0.446	3.644	0.852	0.847	1087	909	565	1054	1049	932.800	; assembly_13 versus NAC035_MA2046.2_JASPAR (NAC035:MA2046.2:JASPAR); m=228/229; ncol2=7; w=0; offset=1; strand=D; shift=10; score= 932.8; ----------CACGGCA--- ; cor=0.700; Ncor=0.446; logoDP=3.644; NsEucl=0.852; NSW=0.847; rcor=1087; rNcor=909; rlogoDP=565; rNsEucl=1054; rNSW=1049; rank_mean=932.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 41 800 43 10 41 45 755 0 0 0 c 0 0 0 0 0 0 0 0 0 0 632 4 736 8 29 720 4 0 0 0 g 0 0 0 0 0 0 0 0 0 0 36 3 24 787 649 7 29 0 0 0 t 0 0 0 0 0 0 0 0 0 0 104 6 10 8 94 41 25 0 0 0
ERF012_MA1248.2_JASPAR_rc_shift13 (ERF012:MA1248.2:JASPAR_rc)	0.762	0.445	0.194	0.862	0.866	709	912	1063	1021	962	933.400	; assembly_13 versus ERF012_MA1248.2_JASPAR_rc (ERF012:MA1248.2:JASPAR_rc); m=229/229; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 933.4; -------------GkCGGTG ; cor=0.762; Ncor=0.445; logoDP=0.194; NsEucl=0.862; NSW=0.866; rcor=709; rNcor=912; rlogoDP=1063; rNsEucl=1021; rNSW=962; rank_mean=933.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 10 98 0 0 0 2 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 563 0 0 36 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 558 171 1 567 568 0 568 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 299 4 1 0 530 0

One-to-n matrix alignment; reference matrix: assembly_4_shift5 ; 25 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
assembly_4_shift5 (assembly_4)
; assembly_4; m=0 (reference); ncol1=12; shift=5; ncol=17; -----waAAACCGAAaw ; Alignment reference a 0 0 0 0 0 505 533 1364 1444 1415 110 110 260 1396 1381 646 500 c 0 0 0 0 0 328 299 18 9 23 1242 1214 89 15 28 276 355 g 0 0 0 0 0 214 293 44 13 15 32 45 1060 43 24 228 202 t 0 0 0 0 0 440 362 61 21 34 103 118 78 33 54 337 430

MYB101_MA1173.1_JASPAR_shift2 (MYB101:MA1173.1:JASPAR) 0.854 0.683 5.169 0.935 0.949 247 128 352 105 137 193.800
; assembly_4 versus MYB101_MA1173.1_JASPAR (MYB101:MA1173.1:JASPAR); m=1/24; ncol2=15; w=-3; offset=-3; strand=D; shift=2; score= 193.8; --aamyrwAACCGwawy ; cor=0.854; Ncor=0.683; logoDP=5.169; NsEucl=0.935; NSW=0.949; rcor=247; rNcor=128; rlogoDP=352; rNsEucl=105; rNSW=137; rank_mean=193.800; match_rank= a 0 0 327 369 198 140 180 160 596 598 0 54 86 367 407 206 139 c 0 0 82 53 249 261 120 51 2 0 600 424 4 43 72 112 181 g 0 0 86 70 47 44 188 47 1 2 0 49 510 27 2 22 68 t 0 0 105 108 106 155 112 342 1 0 0 73 0 163 119 260 212

MYB101_MA1173.2_JASPAR_shift7 (MYB101:MA1173.2:JASPAR) 0.864 0.648 5.166 0.916 0.937 212 197 353 272 216 250.000
; assembly_4 versus MYB101_MA1173.2_JASPAR (MYB101:MA1173.2:JASPAR); m=2/24; ncol2=9; w=0; offset=2; strand=D; shift=7; score= 250; -------wAACCGwaw- ; cor=0.864; Ncor=0.648; logoDP=5.166; NsEucl=0.916; NSW=0.937; rcor=212; rNcor=197; rlogoDP=353; rNsEucl=272; rNSW=216; rank_mean=250.000; match_rank= a 0 0 0 0 0 0 0 160 596 598 0 54 86 367 407 206 0 c 0 0 0 0 0 0 0 51 2 0 600 424 4 43 72 112 0 g 0 0 0 0 0 0 0 47 1 2 0 49 510 27 2 22 0 t 0 0 0 0 0 0 0 342 1 0 0 73 0 163 119 260 0

AT1G76870_MA1367.1_JASPAR_shift2 (AT1G76870:MA1367.1:JASPAR) 0.791 0.580 5.429 0.913 0.917 546 426 306 320 449 409.400
; assembly_4 versus AT1G76870_MA1367.1_JASPAR (AT1G76870:MA1367.1:JASPAR); m=3/24; ncol2=14; w=-3; offset=-3; strand=D; shift=2; score= 409.4; --awmywAAACCrsww- ; cor=0.791; Ncor=0.580; logoDP=5.429; NsEucl=0.913; NSW=0.917; rcor=546; rNcor=426; rlogoDP=306; rNsEucl=320; rNSW=449; rank_mean=409.400; match_rank= a 0 0 209 218 173 87 287 436 418 448 6 0 175 41 177 229 0 c 0 0 94 64 127 173 21 5 0 6 450 452 4 150 71 46 0 g 0 0 53 59 65 73 3 5 2 0 0 0 257 222 53 35 0 t 0 0 100 115 91 123 145 10 36 2 0 4 20 43 155 146 0

TRP5_MA1802.2_JASPAR_shift6 (TRP5:MA1802.2:JASPAR) 0.837 0.488 2.959 0.901 0.931 318 765 645 572 274 514.800
; assembly_4 versus TRP5_MA1802.2_JASPAR (TRP5:MA1802.2:JASPAR); m=4/24; ncol2=7; w=0; offset=1; strand=D; shift=6; score= 514.8; ------wAAACCy---- ; cor=0.837; Ncor=0.488; logoDP=2.959; NsEucl=0.901; NSW=0.931; rcor=318; rNcor=765; rlogoDP=645; rNsEucl=572; rNSW=274; rank_mean=514.800; match_rank= a 0 0 0 0 0 0 343 845 852 746 44 26 91 0 0 0 0 c 0 0 0 0 0 0 61 19 24 125 776 931 518 0 0 0 0 g 0 0 0 0 0 0 57 119 28 99 7 17 70 0 0 0 0 t 0 0 0 0 0 0 538 17 95 31 173 26 321 0 0 0 0

MYB33_MA1391.1_JASPAR_shift6 (MYB33:MA1391.1:JASPAR) 0.715 0.655 4.956 0.900 0.890 980 180 396 596 755 581.400
; assembly_4 versus MYB33_MA1391.1_JASPAR (MYB33:MA1391.1:JASPAR); m=5/24; ncol2=11; w=0; offset=1; strand=D; shift=6; score= 581.4; ------aTAACyGwmwh ; cor=0.715; Ncor=0.655; logoDP=4.956; NsEucl=0.900; NSW=0.890; rcor=980; rNcor=180; rlogoDP=396; rNsEucl=596; rNSW=755; rank_mean=581.400; match_rank= a 0 0 0 0 0 0 239 34 600 600 0 52 120 352 308 220 161 c 0 0 0 0 0 0 140 11 0 0 600 282 0 83 173 39 168 g 0 0 0 0 0 0 138 0 0 0 0 79 480 0 1 5 68 t 0 0 0 0 0 0 83 555 0 0 0 187 0 165 118 336 203

MYB101.ampDAP_M0506_AthalianaCistrome_shift2 (MYB101.ampDAP:M0506:AthalianaCistrome) 0.712 0.569 4.927 0.908 0.898 1001 466 402 428 666 592.600
; assembly_4 versus MYB101.ampDAP_M0506_AthalianaCistrome (MYB101.ampDAP:M0506:AthalianaCistrome); m=6/24; ncol2=15; w=-3; offset=-3; strand=D; shift=2; score= 592.6; --aamyrTAACyGwmww ; cor=0.712; Ncor=0.569; logoDP=4.927; NsEucl=0.908; NSW=0.898; rcor=1001; rNcor=466; rlogoDP=402; rNsEucl=428; rNSW=666; rank_mean=592.600; match_rank= a 0 0 332 311 162 136 210 58 600 600 0 58 120 303 305 202 152 c 0 0 64 86 247 188 116 35 0 0 600 306 0 53 156 30 130 g 0 0 81 74 42 54 249 2 0 0 0 71 480 4 0 13 76 t 0 0 123 129 149 222 25 505 0 0 0 165 0 240 139 355 242

MYB24_M1343_1.02_CISBP_rc_shift9 (MYB24:M1343_1.02:CISBP_rc) 0.795 0.489 0.328 0.904 0.926 523 755 987 517 340 624.400
; assembly_4 versus MYB24_M1343_1.02_CISBP_rc (MYB24:M1343_1.02:CISBP_rc); m=7/24; ncol2=9; w=0; offset=4; strand=R; shift=9; score= 624.4; ---------rCCtAMyt ; cor=0.795; Ncor=0.489; logoDP=0.328; NsEucl=0.904; NSW=0.926; rcor=523; rNcor=755; rlogoDP=987; rNsEucl=517; rNSW=340; rank_mean=624.400; match_rank= a 0 0 0 0 0 0 0 0 0 58 8 4 19 89 72 10 23 c 0 0 0 0 0 0 0 0 0 2 86 88 6 0 25 60 24 g 0 0 0 0 0 0 0 0 0 36 1 3 21 6 0 1 16 t 0 0 0 0 0 0 0 0 0 4 5 5 54 5 3 29 37

MYB24_MA1037.1_JASPAR_rc_shift9 (MYB24:MA1037.1:JASPAR_rc) 0.795 0.489 0.333 0.904 0.926 525 756 984 519 341 625.000
; assembly_4 versus MYB24_MA1037.1_JASPAR_rc (MYB24:MA1037.1:JASPAR_rc); m=8/24; ncol2=9; w=0; offset=4; strand=R; shift=9; score= 625; ---------rCCtAMyt ; cor=0.795; Ncor=0.489; logoDP=0.333; NsEucl=0.904; NSW=0.926; rcor=525; rNcor=756; rlogoDP=984; rNsEucl=519; rNSW=341; rank_mean=625.000; match_rank= a 0 0 0 0 0 0 0 0 0 582 84 42 192 889 722 97 231 c 0 0 0 0 0 0 0 0 0 19 860 879 60 0 253 596 243 g 0 0 0 0 0 0 0 0 0 360 5 26 206 60 0 20 158 t 0 0 0 0 0 0 0 0 0 39 51 53 542 50 25 287 369

AL4G44590.t1_LOBAS2_1_AT2G45420_EEAD0589_EEADannot_shift1 (AL4G44590.t1_LOBAS2_1_AT2G45420:EEAD0589:EEADannot) 0.749 0.529 7.024 0.895 0.868 773 605 144 692 954 633.600
; assembly_4 versus AL4G44590.t1_LOBAS2_1_AT2G45420_EEAD0589_EEADannot (AL4G44590.t1_LOBAS2_1_AT2G45420:EEAD0589:EEADannot); m=9/24; ncol2=17; w=-4; offset=-4; strand=D; shift=1; score= 633.6; -CCGCCAAAACCGyAAA ; cor=0.749; Ncor=0.529; logoDP=7.024; NsEucl=0.895; NSW=0.868; rcor=773; rNcor=605; rlogoDP=144; rNsEucl=692; rNSW=954; rank_mean=633.600; match_rank= a 0 0 0 1 3 12 97 100 100 92 11 2 2 3 100 98 95 c 0 100 98 2 77 77 3 0 0 8 84 94 0 43 0 0 0 g 0 0 0 95 6 3 0 0 0 0 0 1 96 6 0 2 3 t 0 0 2 2 14 8 0 0 0 0 5 3 2 48 0 0 2

MYB65_MA1177.1_JASPAR_shift3 (MYB65:MA1177.1:JASPAR) 0.707 0.556 4.855 0.900 0.891 1039 518 412 591 751 662.200
; assembly_4 versus MYB65_MA1177.1_JASPAR (MYB65:MA1177.1:JASPAR); m=10/24; ncol2=13; w=-2; offset=-2; strand=D; shift=3; score= 662.2; ---ayyrTAACcGhmw- ; cor=0.707; Ncor=0.556; logoDP=4.855; NsEucl=0.900; NSW=0.891; rcor=1039; rNcor=518; rlogoDP=412; rNsEucl=591; rNSW=751; rank_mean=662.200; match_rank= a 0 0 0 284 129 105 183 75 599 599 0 38 76 178 280 266 0 c 0 0 0 61 250 218 121 75 0 0 599 354 0 153 219 57 0 g 0 0 0 105 41 65 205 0 0 0 0 118 523 4 2 75 0 t 0 0 0 149 179 211 90 449 0 0 0 89 0 264 98 201 0

MYB65.ampDAP_M0508_AthalianaCistrome_shift6 (MYB65.ampDAP:M0508:AthalianaCistrome) 0.721 0.496 5.026 0.901 0.892 933 727 385 576 734 671.000
; assembly_4 versus MYB65.ampDAP_M0508_AthalianaCistrome (MYB65.ampDAP:M0508:AthalianaCistrome); m=11/24; ncol2=15; w=0; offset=1; strand=D; shift=6; score= 671; ------aTAACcGwmwm ; cor=0.721; Ncor=0.496; logoDP=5.026; NsEucl=0.901; NSW=0.892; rcor=933; rNcor=727; rlogoDP=385; rNsEucl=576; rNSW=734; rank_mean=671.000; match_rank= a 0 0 0 0 0 0 233 47 600 600 0 74 82 211 359 362 202 c 0 0 0 0 0 0 132 36 0 0 600 363 0 114 188 40 220 g 0 0 0 0 0 0 144 0 0 0 0 74 518 0 0 31 67 t 0 0 0 0 0 0 91 517 0 0 0 89 0 275 53 167 111

TRP5_MA1802.1_JASPAR_shift4 (TRP5:MA1802.1:JASPAR) 0.740 0.512 2.979 0.896 0.903 813 673 642 676 616 684.000
; assembly_4 versus TRP5_MA1802.1_JASPAR (TRP5:MA1802.1:JASPAR); m=12/24; ncol2=10; w=-1; offset=-1; strand=D; shift=4; score= 684; ----swwAAACCyy--- ; cor=0.740; Ncor=0.512; logoDP=2.979; NsEucl=0.896; NSW=0.903; rcor=813; rNcor=673; rlogoDP=642; rNsEucl=676; rNSW=616; rank_mean=684.000; match_rank= a 0 0 0 0 190 303.26 343 845 852 745.83 44 26 91 191 0 0 0 c 0 0 0 0 351 239 61 19 24 125 776 931 518 334 0 0 0 g 0 0 0 0 281.34 109 57 119 28 99 7.35 17 70.135 109 0 0 0 t 0 0 0 0 178 349 538 17 95 31 173 26 321 366 0 0 0

MYB24_MA1037.2_JASPAR_rc_shift9 (MYB24:MA1037.2:JASPAR_rc) 0.797 0.465 0.414 0.891 0.916 515 841 958 761 458 706.600
; assembly_4 versus MYB24_MA1037.2_JASPAR_rc (MYB24:MA1037.2:JASPAR_rc); m=13/24; ncol2=7; w=0; offset=4; strand=R; shift=9; score= 706.6; ---------rCCtAMy- ; cor=0.797; Ncor=0.465; logoDP=0.414; NsEucl=0.891; NSW=0.916; rcor=515; rNcor=841; rlogoDP=958; rNsEucl=761; rNSW=458; rank_mean=706.600; match_rank= a 0 0 0 0 0 0 0 0 0 582 84 42 192 889 722 97 0 c 0 0 0 0 0 0 0 0 0 19 860 879 60 0 253 596 0 g 0 0 0 0 0 0 0 0 0 360 5 26 206 60 0 20 0 t 0 0 0 0 0 0 0 0 0 39 51 53 542 50 25 287 0

MYB70_MA1393.1_JASPAR_shift7 (MYB70:MA1393.1:JASPAR) 0.725 0.453 4.588 0.894 0.889 907 881 441 705 773 741.400
; assembly_4 versus MYB70_MA1393.1_JASPAR (MYB70:MA1393.1:JASPAR); m=14/24; ncol2=14; w=0; offset=2; strand=D; shift=7; score= 741.4; -------tAACsGwaww ; cor=0.725; Ncor=0.453; logoDP=4.588; NsEucl=0.894; NSW=0.889; rcor=907; rNcor=881; rlogoDP=441; rNsEucl=705; rNSW=773; rank_mean=741.400; match_rank= a 0 0 0 0 0 0 0 70 600 577 0 37 90 239 312 296 219 c 0 0 0 0 0 0 0 120 0 23 600 259 0 56 136 28 89 g 0 0 0 0 0 0 0 15 0 0 0 156 510 12 5 32 27 t 0 0 0 0 0 0 0 395 0 0 0 148 0 293 147 244 265

Carub.0004s2803.1_LOBAS2_1_AT2G45420_EEAD0610_EEADannot_rc_shift0 (Carub.0004s2803.1_LOBAS2_1_AT2G45420:EEAD0610:EEADannot_rc) 0.743 0.437 1.259 0.898 0.897 798 935 810 629 679 770.200
; assembly_4 versus Carub.0004s2803.1_LOBAS2_1_AT2G45420_EEAD0610_EEADannot_rc (Carub.0004s2803.1_LOBAS2_1_AT2G45420:EEAD0610:EEADannot_rc); m=15/24; ncol2=15; w=-5; offset=-5; strand=R; shift=0; score= 770.2; yCCGsmAAAaCCGsA-- ; cor=0.743; Ncor=0.437; logoDP=1.259; NsEucl=0.898; NSW=0.897; rcor=798; rNcor=935; rlogoDP=810; rNsEucl=629; rNSW=679; rank_mean=770.200; match_rank= a 9 0 0 2 12 48 82 94 83 51 8 11 0 1 70 0 0 c 42 89 99 4 37 35 2 0 1 23 79 72 0 31 15 0 0 g 18 9 1 90 36 11 10 6 0 3 3 9 92 47 5 0 0 t 31 2 0 4 15 6 6 0 16 23 10 8 8 21 10 0 0

MYB92_MA1780.2_JASPAR_shift9 (MYB92:MA1780.2:JASPAR) 0.760 0.443 5.028 0.866 0.874 717 916 384 995 902 782.800
; assembly_4 versus MYB92_MA1780.2_JASPAR (MYB92:MA1780.2:JASPAR); m=16/24; ncol2=7; w=0; offset=4; strand=D; shift=9; score= 782.8; ---------ACCTAMc- ; cor=0.760; Ncor=0.443; logoDP=5.028; NsEucl=0.866; NSW=0.874; rcor=717; rNcor=916; rlogoDP=384; rNsEucl=995; rNSW=902; rank_mean=782.800; match_rank= a 0 0 0 0 0 0 0 0 0 968 0 0 118 1000 701 91 0 c 0 0 0 0 0 0 0 0 0 32 1000 1000 0 0 299 642 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 64 0 t 0 0 0 0 0 0 0 0 0 0 0 0 882 0 0 203 0

SVP_MA0555.2_JASPAR_shift0 (SVP:MA0555.2:JASPAR) 0.702 0.454 4.624 0.894 0.875 1077 873 434 716 892 798.400
; assembly_4 versus SVP_MA0555.2_JASPAR (SVP:MA0555.2:JASPAR); m=17/24; ncol2=16; w=-5; offset=-5; strand=D; shift=0; score= 798.4; wwwCCaAAAAwGGAAA- ; cor=0.702; Ncor=0.454; logoDP=4.624; NsEucl=0.894; NSW=0.875; rcor=1077; rNcor=873; rlogoDP=434; rNsEucl=716; rNSW=892; rank_mean=798.400; match_rank= a 28 28 33 7 3 58 67 86 77 78 34 16 0 71 84 77 0 c 11 1 16 85 79 16 5 0 1 8 10 0 0 10 2 7 0 g 8 10 11 0 1 7 8 0 2 3 14 74 92 0 2 2 0 t 45 53 32 0 9 11 12 6 12 3 34 2 0 11 4 6 0

MYB2_MYB2_Athamap_shift6 (MYB2:MYB2:Athamap) 0.710 0.474 4.643 0.875 0.875 1020 815 433 944 891 820.600
; assembly_4 versus MYB2_MYB2_Athamap (MYB2:MYB2:Athamap); m=18/24; ncol2=8; w=0; offset=1; strand=D; shift=6; score= 820.6; ------vhAACbvm--- ; cor=0.710; Ncor=0.474; logoDP=4.643; NsEucl=0.875; NSW=0.875; rcor=1020; rNcor=815; rlogoDP=433; rNsEucl=944; rNSW=891; rank_mean=820.600; match_rank= a 0 0 0 0 0 0 1 1 4 4 0 0 1 2 0 0 0 c 0 0 0 0 0 0 2 1 0 0 4 1 1 2 0 0 0 g 0 0 0 0 0 0 1 0 0 0 0 1 2 0 0 0 0 t 0 0 0 0 0 0 0 2 0 0 0 2 0 0 0 0 0

OsWRKY45_6ir8_A_3D-footprint_shift5 (OsWRKY45:6ir8_A:3D-footprint) 0.723 0.422 2.835 0.880 0.900 919 1000 670 889 649 825.400
; assembly_4 versus OsWRKY45_6ir8_A_3D-footprint (OsWRKY45:6ir8_A:3D-footprint); m=19/24; ncol2=7; w=0; offset=0; strand=D; shift=5; score= 825.4; -----tnnnACC----- ; cor=0.723; Ncor=0.422; logoDP=2.835; NsEucl=0.880; NSW=0.900; rcor=919; rNcor=1000; rlogoDP=670; rNsEucl=889; rNSW=649; rank_mean=825.400; match_rank= a 0 0 0 0 0 19 24 24 24 96 0 0 0 0 0 0 0 c 0 0 0 0 0 19 24 24 24 0 96 77 0 0 0 0 0 g 0 0 0 0 0 19 24 24 24 0 0 0 0 0 0 0 0 t 0 0 0 0 0 39 24 24 24 0 0 19 0 0 0 0 0

Zm00001d035604_MA1829.2_JASPAR_shift9 (Zm00001d035604:MA1829.2:JASPAR) 0.747 0.436 4.012 0.863 0.869 785 939 516 1010 937 837.400
; assembly_4 versus Zm00001d035604_MA1829.2_JASPAR (Zm00001d035604:MA1829.2:JASPAR); m=20/24; ncol2=7; w=0; offset=4; strand=D; shift=9; score= 837.4; ---------ACCTAAC- ; cor=0.747; Ncor=0.436; logoDP=4.012; NsEucl=0.863; NSW=0.869; rcor=785; rNcor=939; rlogoDP=516; rNsEucl=1010; rNSW=937; rank_mean=837.400; match_rank= a 0 0 0 0 0 0 0 0 0 247 8 3 17 268 243 15 0 c 0 0 0 0 0 0 0 0 0 9 263 276 10 7 28 247 0 g 0 0 0 0 0 0 0 0 0 17 7 2 14 8 10 3 0 t 0 0 0 0 0 0 0 0 0 11 6 3 243 1 3 19 0

MYB65_MA1177.2_JASPAR_shift7 (MYB65:MA1177.2:JASPAR) 0.713 0.475 4.849 0.866 0.856 996 802 414 996 1019 845.400
; assembly_4 versus MYB65_MA1177.2_JASPAR (MYB65:MA1177.2:JASPAR); m=21/24; ncol2=8; w=0; offset=2; strand=D; shift=7; score= 845.4; -------TAACcGhm-- ; cor=0.713; Ncor=0.475; logoDP=4.849; NsEucl=0.866; NSW=0.856; rcor=996; rNcor=802; rlogoDP=414; rNsEucl=996; rNSW=1019; rank_mean=845.400; match_rank= a 0 0 0 0 0 0 0 75 599 599 0 38 76 178 280 0 0 c 0 0 0 0 0 0 0 75 0 0 599 354 0 153 219 0 0 g 0 0 0 0 0 0 0 0 0 0 0 118 523 4 2 0 0 t 0 0 0 0 0 0 0 449 0 0 0 89 0 264 98 0 0

AtGRP7iCLIP_EEAD0145_EEADannot_rc_shift5 (AtGRP7iCLIP:EEAD0145:EEADannot_rc) 0.733 0.428 0.465 0.880 0.899 865 962 950 895 658 866.000
; assembly_4 versus AtGRP7iCLIP_EEAD0145_EEADannot_rc (AtGRP7iCLIP:EEAD0145:EEADannot_rc); m=22/24; ncol2=7; w=0; offset=0; strand=R; shift=5; score= 866; -----aGAAACa----- ; cor=0.733; Ncor=0.428; logoDP=0.465; NsEucl=0.880; NSW=0.899; rcor=865; rNcor=962; rlogoDP=950; rNsEucl=895; rNSW=658; rank_mean=866.000; match_rank= a 0 0 0 0 0 55 4 97 77 77 8 60 0 0 0 0 0 c 0 0 0 0 0 20 19 1 0 1 77 8 0 0 0 0 0 g 0 0 0 0 0 13 68 0 11 17 0 15 0 0 0 0 0 t 0 0 0 0 0 12 9 2 12 5 15 17 0 0 0 0 0

CsMYB60-dreme_EEAD0150_EEADannot_shift9 (CsMYB60-dreme:EEAD0150:EEADannot) 0.701 0.409 5.070 0.848 0.838 1083 1044 375 1065 1062 925.800
; assembly_4 versus CsMYB60-dreme_EEAD0150_EEADannot (CsMYB60-dreme:EEAD0150:EEADannot); m=23/24; ncol2=7; w=0; offset=4; strand=D; shift=9; score= 925.8; ---------ACCTAmy- ; cor=0.701; Ncor=0.409; logoDP=5.070; NsEucl=0.848; NSW=0.838; rcor=1083; rNcor=1044; rlogoDP=375; rNsEucl=1065; rNSW=1062; rank_mean=925.800; match_rank= a 0 0 0 0 0 0 0 0 0 100 0 0 0 100 54 0 0 c 0 0 0 0 0 0 0 0 0 0 100 100 0 0 46 41 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 59 0

MYB62_MA1294.2_JASPAR_rc_shift9 (MYB62:MA1294.2:JASPAR_rc) 0.706 0.435 1.357 0.868 0.860 1049 942 801 980 1002 954.800
; assembly_4 versus MYB62_MA1294.2_JASPAR_rc (MYB62:MA1294.2:JASPAR_rc); m=24/24; ncol2=9; w=0; offset=4; strand=R; shift=9; score= 954.8; ---------rCCTAAyt ; cor=0.706; Ncor=0.435; logoDP=1.357; NsEucl=0.868; NSW=0.860; rcor=1049; rNcor=942; rlogoDP=801; rNsEucl=980; rNSW=1002; rank_mean=954.800; match_rank= a 0 0 0 0 0 0 0 0 0 242 0 0 29 440 435 33 71 c 0 0 0 0 0 0 0 0 0 5 440 440 0 0 5 263 58 g 0 0 0 0 0 0 0 0 0 188 0 0 0 0 0 32 12 t 0 0 0 0 0 0 0 0 0 5 0 0 411 0 0 112 299

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	Aligned matrices
assembly_4_shift5 (assembly_4)												; assembly_4; m=0 (reference); ncol1=12; shift=5; ncol=17; -----waAAACCGAAaw ; Alignment reference a 0 0 0 0 0 505 533 1364 1444 1415 110 110 260 1396 1381 646 500 c 0 0 0 0 0 328 299 18 9 23 1242 1214 89 15 28 276 355 g 0 0 0 0 0 214 293 44 13 15 32 45 1060 43 24 228 202 t 0 0 0 0 0 440 362 61 21 34 103 118 78 33 54 337 430
MYB101_MA1173.1_JASPAR_shift2 (MYB101:MA1173.1:JASPAR)	0.854	0.683	5.169	0.935	0.949	247	128	352	105	137	193.800	; assembly_4 versus MYB101_MA1173.1_JASPAR (MYB101:MA1173.1:JASPAR); m=1/24; ncol2=15; w=-3; offset=-3; strand=D; shift=2; score= 193.8; --aamyrwAACCGwawy ; cor=0.854; Ncor=0.683; logoDP=5.169; NsEucl=0.935; NSW=0.949; rcor=247; rNcor=128; rlogoDP=352; rNsEucl=105; rNSW=137; rank_mean=193.800; match_rank= a 0 0 327 369 198 140 180 160 596 598 0 54 86 367 407 206 139 c 0 0 82 53 249 261 120 51 2 0 600 424 4 43 72 112 181 g 0 0 86 70 47 44 188 47 1 2 0 49 510 27 2 22 68 t 0 0 105 108 106 155 112 342 1 0 0 73 0 163 119 260 212
MYB101_MA1173.2_JASPAR_shift7 (MYB101:MA1173.2:JASPAR)	0.864	0.648	5.166	0.916	0.937	212	197	353	272	216	250.000	; assembly_4 versus MYB101_MA1173.2_JASPAR (MYB101:MA1173.2:JASPAR); m=2/24; ncol2=9; w=0; offset=2; strand=D; shift=7; score= 250; -------wAACCGwaw- ; cor=0.864; Ncor=0.648; logoDP=5.166; NsEucl=0.916; NSW=0.937; rcor=212; rNcor=197; rlogoDP=353; rNsEucl=272; rNSW=216; rank_mean=250.000; match_rank= a 0 0 0 0 0 0 0 160 596 598 0 54 86 367 407 206 0 c 0 0 0 0 0 0 0 51 2 0 600 424 4 43 72 112 0 g 0 0 0 0 0 0 0 47 1 2 0 49 510 27 2 22 0 t 0 0 0 0 0 0 0 342 1 0 0 73 0 163 119 260 0
AT1G76870_MA1367.1_JASPAR_shift2 (AT1G76870:MA1367.1:JASPAR)	0.791	0.580	5.429	0.913	0.917	546	426	306	320	449	409.400	; assembly_4 versus AT1G76870_MA1367.1_JASPAR (AT1G76870:MA1367.1:JASPAR); m=3/24; ncol2=14; w=-3; offset=-3; strand=D; shift=2; score= 409.4; --awmywAAACCrsww- ; cor=0.791; Ncor=0.580; logoDP=5.429; NsEucl=0.913; NSW=0.917; rcor=546; rNcor=426; rlogoDP=306; rNsEucl=320; rNSW=449; rank_mean=409.400; match_rank= a 0 0 209 218 173 87 287 436 418 448 6 0 175 41 177 229 0 c 0 0 94 64 127 173 21 5 0 6 450 452 4 150 71 46 0 g 0 0 53 59 65 73 3 5 2 0 0 0 257 222 53 35 0 t 0 0 100 115 91 123 145 10 36 2 0 4 20 43 155 146 0
TRP5_MA1802.2_JASPAR_shift6 (TRP5:MA1802.2:JASPAR)	0.837	0.488	2.959	0.901	0.931	318	765	645	572	274	514.800	; assembly_4 versus TRP5_MA1802.2_JASPAR (TRP5:MA1802.2:JASPAR); m=4/24; ncol2=7; w=0; offset=1; strand=D; shift=6; score= 514.8; ------wAAACCy---- ; cor=0.837; Ncor=0.488; logoDP=2.959; NsEucl=0.901; NSW=0.931; rcor=318; rNcor=765; rlogoDP=645; rNsEucl=572; rNSW=274; rank_mean=514.800; match_rank= a 0 0 0 0 0 0 343 845 852 746 44 26 91 0 0 0 0 c 0 0 0 0 0 0 61 19 24 125 776 931 518 0 0 0 0 g 0 0 0 0 0 0 57 119 28 99 7 17 70 0 0 0 0 t 0 0 0 0 0 0 538 17 95 31 173 26 321 0 0 0 0
MYB33_MA1391.1_JASPAR_shift6 (MYB33:MA1391.1:JASPAR)	0.715	0.655	4.956	0.900	0.890	980	180	396	596	755	581.400	; assembly_4 versus MYB33_MA1391.1_JASPAR (MYB33:MA1391.1:JASPAR); m=5/24; ncol2=11; w=0; offset=1; strand=D; shift=6; score= 581.4; ------aTAACyGwmwh ; cor=0.715; Ncor=0.655; logoDP=4.956; NsEucl=0.900; NSW=0.890; rcor=980; rNcor=180; rlogoDP=396; rNsEucl=596; rNSW=755; rank_mean=581.400; match_rank= a 0 0 0 0 0 0 239 34 600 600 0 52 120 352 308 220 161 c 0 0 0 0 0 0 140 11 0 0 600 282 0 83 173 39 168 g 0 0 0 0 0 0 138 0 0 0 0 79 480 0 1 5 68 t 0 0 0 0 0 0 83 555 0 0 0 187 0 165 118 336 203
MYB101.ampDAP_M0506_AthalianaCistrome_shift2 (MYB101.ampDAP:M0506:AthalianaCistrome)	0.712	0.569	4.927	0.908	0.898	1001	466	402	428	666	592.600	; assembly_4 versus MYB101.ampDAP_M0506_AthalianaCistrome (MYB101.ampDAP:M0506:AthalianaCistrome); m=6/24; ncol2=15; w=-3; offset=-3; strand=D; shift=2; score= 592.6; --aamyrTAACyGwmww ; cor=0.712; Ncor=0.569; logoDP=4.927; NsEucl=0.908; NSW=0.898; rcor=1001; rNcor=466; rlogoDP=402; rNsEucl=428; rNSW=666; rank_mean=592.600; match_rank= a 0 0 332 311 162 136 210 58 600 600 0 58 120 303 305 202 152 c 0 0 64 86 247 188 116 35 0 0 600 306 0 53 156 30 130 g 0 0 81 74 42 54 249 2 0 0 0 71 480 4 0 13 76 t 0 0 123 129 149 222 25 505 0 0 0 165 0 240 139 355 242
MYB24_M1343_1.02_CISBP_rc_shift9 (MYB24:M1343_1.02:CISBP_rc)	0.795	0.489	0.328	0.904	0.926	523	755	987	517	340	624.400	; assembly_4 versus MYB24_M1343_1.02_CISBP_rc (MYB24:M1343_1.02:CISBP_rc); m=7/24; ncol2=9; w=0; offset=4; strand=R; shift=9; score= 624.4; ---------rCCtAMyt ; cor=0.795; Ncor=0.489; logoDP=0.328; NsEucl=0.904; NSW=0.926; rcor=523; rNcor=755; rlogoDP=987; rNsEucl=517; rNSW=340; rank_mean=624.400; match_rank= a 0 0 0 0 0 0 0 0 0 58 8 4 19 89 72 10 23 c 0 0 0 0 0 0 0 0 0 2 86 88 6 0 25 60 24 g 0 0 0 0 0 0 0 0 0 36 1 3 21 6 0 1 16 t 0 0 0 0 0 0 0 0 0 4 5 5 54 5 3 29 37
MYB24_MA1037.1_JASPAR_rc_shift9 (MYB24:MA1037.1:JASPAR_rc)	0.795	0.489	0.333	0.904	0.926	525	756	984	519	341	625.000	; assembly_4 versus MYB24_MA1037.1_JASPAR_rc (MYB24:MA1037.1:JASPAR_rc); m=8/24; ncol2=9; w=0; offset=4; strand=R; shift=9; score= 625; ---------rCCtAMyt ; cor=0.795; Ncor=0.489; logoDP=0.333; NsEucl=0.904; NSW=0.926; rcor=525; rNcor=756; rlogoDP=984; rNsEucl=519; rNSW=341; rank_mean=625.000; match_rank= a 0 0 0 0 0 0 0 0 0 582 84 42 192 889 722 97 231 c 0 0 0 0 0 0 0 0 0 19 860 879 60 0 253 596 243 g 0 0 0 0 0 0 0 0 0 360 5 26 206 60 0 20 158 t 0 0 0 0 0 0 0 0 0 39 51 53 542 50 25 287 369
AL4G44590.t1_LOBAS2_1_AT2G45420_EEAD0589_EEADannot_shift1 (AL4G44590.t1_LOBAS2_1_AT2G45420:EEAD0589:EEADannot)	0.749	0.529	7.024	0.895	0.868	773	605	144	692	954	633.600	; assembly_4 versus AL4G44590.t1_LOBAS2_1_AT2G45420_EEAD0589_EEADannot (AL4G44590.t1_LOBAS2_1_AT2G45420:EEAD0589:EEADannot); m=9/24; ncol2=17; w=-4; offset=-4; strand=D; shift=1; score= 633.6; -CCGCCAAAACCGyAAA ; cor=0.749; Ncor=0.529; logoDP=7.024; NsEucl=0.895; NSW=0.868; rcor=773; rNcor=605; rlogoDP=144; rNsEucl=692; rNSW=954; rank_mean=633.600; match_rank= a 0 0 0 1 3 12 97 100 100 92 11 2 2 3 100 98 95 c 0 100 98 2 77 77 3 0 0 8 84 94 0 43 0 0 0 g 0 0 0 95 6 3 0 0 0 0 0 1 96 6 0 2 3 t 0 0 2 2 14 8 0 0 0 0 5 3 2 48 0 0 2
MYB65_MA1177.1_JASPAR_shift3 (MYB65:MA1177.1:JASPAR)	0.707	0.556	4.855	0.900	0.891	1039	518	412	591	751	662.200	; assembly_4 versus MYB65_MA1177.1_JASPAR (MYB65:MA1177.1:JASPAR); m=10/24; ncol2=13; w=-2; offset=-2; strand=D; shift=3; score= 662.2; ---ayyrTAACcGhmw- ; cor=0.707; Ncor=0.556; logoDP=4.855; NsEucl=0.900; NSW=0.891; rcor=1039; rNcor=518; rlogoDP=412; rNsEucl=591; rNSW=751; rank_mean=662.200; match_rank= a 0 0 0 284 129 105 183 75 599 599 0 38 76 178 280 266 0 c 0 0 0 61 250 218 121 75 0 0 599 354 0 153 219 57 0 g 0 0 0 105 41 65 205 0 0 0 0 118 523 4 2 75 0 t 0 0 0 149 179 211 90 449 0 0 0 89 0 264 98 201 0
MYB65.ampDAP_M0508_AthalianaCistrome_shift6 (MYB65.ampDAP:M0508:AthalianaCistrome)	0.721	0.496	5.026	0.901	0.892	933	727	385	576	734	671.000	; assembly_4 versus MYB65.ampDAP_M0508_AthalianaCistrome (MYB65.ampDAP:M0508:AthalianaCistrome); m=11/24; ncol2=15; w=0; offset=1; strand=D; shift=6; score= 671; ------aTAACcGwmwm ; cor=0.721; Ncor=0.496; logoDP=5.026; NsEucl=0.901; NSW=0.892; rcor=933; rNcor=727; rlogoDP=385; rNsEucl=576; rNSW=734; rank_mean=671.000; match_rank= a 0 0 0 0 0 0 233 47 600 600 0 74 82 211 359 362 202 c 0 0 0 0 0 0 132 36 0 0 600 363 0 114 188 40 220 g 0 0 0 0 0 0 144 0 0 0 0 74 518 0 0 31 67 t 0 0 0 0 0 0 91 517 0 0 0 89 0 275 53 167 111
TRP5_MA1802.1_JASPAR_shift4 (TRP5:MA1802.1:JASPAR)	0.740	0.512	2.979	0.896	0.903	813	673	642	676	616	684.000	; assembly_4 versus TRP5_MA1802.1_JASPAR (TRP5:MA1802.1:JASPAR); m=12/24; ncol2=10; w=-1; offset=-1; strand=D; shift=4; score= 684; ----swwAAACCyy--- ; cor=0.740; Ncor=0.512; logoDP=2.979; NsEucl=0.896; NSW=0.903; rcor=813; rNcor=673; rlogoDP=642; rNsEucl=676; rNSW=616; rank_mean=684.000; match_rank= a 0 0 0 0 190 303.26 343 845 852 745.83 44 26 91 191 0 0 0 c 0 0 0 0 351 239 61 19 24 125 776 931 518 334 0 0 0 g 0 0 0 0 281.34 109 57 119 28 99 7.35 17 70.135 109 0 0 0 t 0 0 0 0 178 349 538 17 95 31 173 26 321 366 0 0 0
MYB24_MA1037.2_JASPAR_rc_shift9 (MYB24:MA1037.2:JASPAR_rc)	0.797	0.465	0.414	0.891	0.916	515	841	958	761	458	706.600	; assembly_4 versus MYB24_MA1037.2_JASPAR_rc (MYB24:MA1037.2:JASPAR_rc); m=13/24; ncol2=7; w=0; offset=4; strand=R; shift=9; score= 706.6; ---------rCCtAMy- ; cor=0.797; Ncor=0.465; logoDP=0.414; NsEucl=0.891; NSW=0.916; rcor=515; rNcor=841; rlogoDP=958; rNsEucl=761; rNSW=458; rank_mean=706.600; match_rank= a 0 0 0 0 0 0 0 0 0 582 84 42 192 889 722 97 0 c 0 0 0 0 0 0 0 0 0 19 860 879 60 0 253 596 0 g 0 0 0 0 0 0 0 0 0 360 5 26 206 60 0 20 0 t 0 0 0 0 0 0 0 0 0 39 51 53 542 50 25 287 0
MYB70_MA1393.1_JASPAR_shift7 (MYB70:MA1393.1:JASPAR)	0.725	0.453	4.588	0.894	0.889	907	881	441	705	773	741.400	; assembly_4 versus MYB70_MA1393.1_JASPAR (MYB70:MA1393.1:JASPAR); m=14/24; ncol2=14; w=0; offset=2; strand=D; shift=7; score= 741.4; -------tAACsGwaww ; cor=0.725; Ncor=0.453; logoDP=4.588; NsEucl=0.894; NSW=0.889; rcor=907; rNcor=881; rlogoDP=441; rNsEucl=705; rNSW=773; rank_mean=741.400; match_rank= a 0 0 0 0 0 0 0 70 600 577 0 37 90 239 312 296 219 c 0 0 0 0 0 0 0 120 0 23 600 259 0 56 136 28 89 g 0 0 0 0 0 0 0 15 0 0 0 156 510 12 5 32 27 t 0 0 0 0 0 0 0 395 0 0 0 148 0 293 147 244 265
Carub.0004s2803.1_LOBAS2_1_AT2G45420_EEAD0610_EEADannot_rc_shift0 (Carub.0004s2803.1_LOBAS2_1_AT2G45420:EEAD0610:EEADannot_rc)	0.743	0.437	1.259	0.898	0.897	798	935	810	629	679	770.200	; assembly_4 versus Carub.0004s2803.1_LOBAS2_1_AT2G45420_EEAD0610_EEADannot_rc (Carub.0004s2803.1_LOBAS2_1_AT2G45420:EEAD0610:EEADannot_rc); m=15/24; ncol2=15; w=-5; offset=-5; strand=R; shift=0; score= 770.2; yCCGsmAAAaCCGsA-- ; cor=0.743; Ncor=0.437; logoDP=1.259; NsEucl=0.898; NSW=0.897; rcor=798; rNcor=935; rlogoDP=810; rNsEucl=629; rNSW=679; rank_mean=770.200; match_rank= a 9 0 0 2 12 48 82 94 83 51 8 11 0 1 70 0 0 c 42 89 99 4 37 35 2 0 1 23 79 72 0 31 15 0 0 g 18 9 1 90 36 11 10 6 0 3 3 9 92 47 5 0 0 t 31 2 0 4 15 6 6 0 16 23 10 8 8 21 10 0 0
MYB92_MA1780.2_JASPAR_shift9 (MYB92:MA1780.2:JASPAR)	0.760	0.443	5.028	0.866	0.874	717	916	384	995	902	782.800	; assembly_4 versus MYB92_MA1780.2_JASPAR (MYB92:MA1780.2:JASPAR); m=16/24; ncol2=7; w=0; offset=4; strand=D; shift=9; score= 782.8; ---------ACCTAMc- ; cor=0.760; Ncor=0.443; logoDP=5.028; NsEucl=0.866; NSW=0.874; rcor=717; rNcor=916; rlogoDP=384; rNsEucl=995; rNSW=902; rank_mean=782.800; match_rank= a 0 0 0 0 0 0 0 0 0 968 0 0 118 1000 701 91 0 c 0 0 0 0 0 0 0 0 0 32 1000 1000 0 0 299 642 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 64 0 t 0 0 0 0 0 0 0 0 0 0 0 0 882 0 0 203 0
SVP_MA0555.2_JASPAR_shift0 (SVP:MA0555.2:JASPAR)	0.702	0.454	4.624	0.894	0.875	1077	873	434	716	892	798.400	; assembly_4 versus SVP_MA0555.2_JASPAR (SVP:MA0555.2:JASPAR); m=17/24; ncol2=16; w=-5; offset=-5; strand=D; shift=0; score= 798.4; wwwCCaAAAAwGGAAA- ; cor=0.702; Ncor=0.454; logoDP=4.624; NsEucl=0.894; NSW=0.875; rcor=1077; rNcor=873; rlogoDP=434; rNsEucl=716; rNSW=892; rank_mean=798.400; match_rank= a 28 28 33 7 3 58 67 86 77 78 34 16 0 71 84 77 0 c 11 1 16 85 79 16 5 0 1 8 10 0 0 10 2 7 0 g 8 10 11 0 1 7 8 0 2 3 14 74 92 0 2 2 0 t 45 53 32 0 9 11 12 6 12 3 34 2 0 11 4 6 0
MYB2_MYB2_Athamap_shift6 (MYB2:MYB2:Athamap)	0.710	0.474	4.643	0.875	0.875	1020	815	433	944	891	820.600	; assembly_4 versus MYB2_MYB2_Athamap (MYB2:MYB2:Athamap); m=18/24; ncol2=8; w=0; offset=1; strand=D; shift=6; score= 820.6; ------vhAACbvm--- ; cor=0.710; Ncor=0.474; logoDP=4.643; NsEucl=0.875; NSW=0.875; rcor=1020; rNcor=815; rlogoDP=433; rNsEucl=944; rNSW=891; rank_mean=820.600; match_rank= a 0 0 0 0 0 0 1 1 4 4 0 0 1 2 0 0 0 c 0 0 0 0 0 0 2 1 0 0 4 1 1 2 0 0 0 g 0 0 0 0 0 0 1 0 0 0 0 1 2 0 0 0 0 t 0 0 0 0 0 0 0 2 0 0 0 2 0 0 0 0 0
OsWRKY45_6ir8_A_3D-footprint_shift5 (OsWRKY45:6ir8_A:3D-footprint)	0.723	0.422	2.835	0.880	0.900	919	1000	670	889	649	825.400	; assembly_4 versus OsWRKY45_6ir8_A_3D-footprint (OsWRKY45:6ir8_A:3D-footprint); m=19/24; ncol2=7; w=0; offset=0; strand=D; shift=5; score= 825.4; -----tnnnACC----- ; cor=0.723; Ncor=0.422; logoDP=2.835; NsEucl=0.880; NSW=0.900; rcor=919; rNcor=1000; rlogoDP=670; rNsEucl=889; rNSW=649; rank_mean=825.400; match_rank= a 0 0 0 0 0 19 24 24 24 96 0 0 0 0 0 0 0 c 0 0 0 0 0 19 24 24 24 0 96 77 0 0 0 0 0 g 0 0 0 0 0 19 24 24 24 0 0 0 0 0 0 0 0 t 0 0 0 0 0 39 24 24 24 0 0 19 0 0 0 0 0
Zm00001d035604_MA1829.2_JASPAR_shift9 (Zm00001d035604:MA1829.2:JASPAR)	0.747	0.436	4.012	0.863	0.869	785	939	516	1010	937	837.400	; assembly_4 versus Zm00001d035604_MA1829.2_JASPAR (Zm00001d035604:MA1829.2:JASPAR); m=20/24; ncol2=7; w=0; offset=4; strand=D; shift=9; score= 837.4; ---------ACCTAAC- ; cor=0.747; Ncor=0.436; logoDP=4.012; NsEucl=0.863; NSW=0.869; rcor=785; rNcor=939; rlogoDP=516; rNsEucl=1010; rNSW=937; rank_mean=837.400; match_rank= a 0 0 0 0 0 0 0 0 0 247 8 3 17 268 243 15 0 c 0 0 0 0 0 0 0 0 0 9 263 276 10 7 28 247 0 g 0 0 0 0 0 0 0 0 0 17 7 2 14 8 10 3 0 t 0 0 0 0 0 0 0 0 0 11 6 3 243 1 3 19 0
MYB65_MA1177.2_JASPAR_shift7 (MYB65:MA1177.2:JASPAR)	0.713	0.475	4.849	0.866	0.856	996	802	414	996	1019	845.400	; assembly_4 versus MYB65_MA1177.2_JASPAR (MYB65:MA1177.2:JASPAR); m=21/24; ncol2=8; w=0; offset=2; strand=D; shift=7; score= 845.4; -------TAACcGhm-- ; cor=0.713; Ncor=0.475; logoDP=4.849; NsEucl=0.866; NSW=0.856; rcor=996; rNcor=802; rlogoDP=414; rNsEucl=996; rNSW=1019; rank_mean=845.400; match_rank= a 0 0 0 0 0 0 0 75 599 599 0 38 76 178 280 0 0 c 0 0 0 0 0 0 0 75 0 0 599 354 0 153 219 0 0 g 0 0 0 0 0 0 0 0 0 0 0 118 523 4 2 0 0 t 0 0 0 0 0 0 0 449 0 0 0 89 0 264 98 0 0
AtGRP7iCLIP_EEAD0145_EEADannot_rc_shift5 (AtGRP7iCLIP:EEAD0145:EEADannot_rc)	0.733	0.428	0.465	0.880	0.899	865	962	950	895	658	866.000	; assembly_4 versus AtGRP7iCLIP_EEAD0145_EEADannot_rc (AtGRP7iCLIP:EEAD0145:EEADannot_rc); m=22/24; ncol2=7; w=0; offset=0; strand=R; shift=5; score= 866; -----aGAAACa----- ; cor=0.733; Ncor=0.428; logoDP=0.465; NsEucl=0.880; NSW=0.899; rcor=865; rNcor=962; rlogoDP=950; rNsEucl=895; rNSW=658; rank_mean=866.000; match_rank= a 0 0 0 0 0 55 4 97 77 77 8 60 0 0 0 0 0 c 0 0 0 0 0 20 19 1 0 1 77 8 0 0 0 0 0 g 0 0 0 0 0 13 68 0 11 17 0 15 0 0 0 0 0 t 0 0 0 0 0 12 9 2 12 5 15 17 0 0 0 0 0
CsMYB60-dreme_EEAD0150_EEADannot_shift9 (CsMYB60-dreme:EEAD0150:EEADannot)	0.701	0.409	5.070	0.848	0.838	1083	1044	375	1065	1062	925.800	; assembly_4 versus CsMYB60-dreme_EEAD0150_EEADannot (CsMYB60-dreme:EEAD0150:EEADannot); m=23/24; ncol2=7; w=0; offset=4; strand=D; shift=9; score= 925.8; ---------ACCTAmy- ; cor=0.701; Ncor=0.409; logoDP=5.070; NsEucl=0.848; NSW=0.838; rcor=1083; rNcor=1044; rlogoDP=375; rNsEucl=1065; rNSW=1062; rank_mean=925.800; match_rank= a 0 0 0 0 0 0 0 0 0 100 0 0 0 100 54 0 0 c 0 0 0 0 0 0 0 0 0 0 100 100 0 0 46 41 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 59 0
MYB62_MA1294.2_JASPAR_rc_shift9 (MYB62:MA1294.2:JASPAR_rc)	0.706	0.435	1.357	0.868	0.860	1049	942	801	980	1002	954.800	; assembly_4 versus MYB62_MA1294.2_JASPAR_rc (MYB62:MA1294.2:JASPAR_rc); m=24/24; ncol2=9; w=0; offset=4; strand=R; shift=9; score= 954.8; ---------rCCTAAyt ; cor=0.706; Ncor=0.435; logoDP=1.357; NsEucl=0.868; NSW=0.860; rcor=1049; rNcor=942; rlogoDP=801; rNsEucl=980; rNSW=1002; rank_mean=954.800; match_rank= a 0 0 0 0 0 0 0 0 0 242 0 0 29 440 435 33 71 c 0 0 0 0 0 0 0 0 0 5 440 440 0 0 5 263 58 g 0 0 0 0 0 0 0 0 0 188 0 0 0 0 0 32 12 t 0 0 0 0 0 0 0 0 0 5 0 0 411 0 0 112 299

One-to-n matrix alignment; reference matrix: assembly_17_shift9 ; 238 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
assembly_17_shift9 (assembly_17)
; assembly_17; m=0 (reference); ncol1=11; shift=9; ncol=20; ---------hwCCGGCGGmd ; Alignment reference a 0 0 0 0 0 0 0 0 0 73 88 21 15 5 14 15 8 32 97 80 c 0 0 0 0 0 0 0 0 0 91 40 226 260 10 18 248 4 8 73 44 g 0 0 0 0 0 0 0 0 0 32 67 31 6 270 243 2 271 234 48 86 t 0 0 0 0 0 0 0 0 0 93 94 11 8 4 14 24 6 15 71 79

AT5G05550_UN0356.1_JASPAR_shift7 (AT5G05550:UN0356.1:JASPAR) 0.848 0.718 5.142 0.925 0.939 264 75 356 162 202 211.800
; assembly_17 versus AT5G05550_UN0356.1_JASPAR (AT5G05550:UN0356.1:JASPAR); m=1/237; ncol2=13; w=-2; offset=-2; strand=D; shift=7; score= 211.8; -------wtCTCCGGCGahr ; cor=0.848; Ncor=0.718; logoDP=5.142; NsEucl=0.925; NSW=0.939; rcor=264; rNcor=75; rlogoDP=356; rNsEucl=162; rNSW=202; rank_mean=211.800; match_rank= a 0 0 0 0 0 0 0 845 482 41 160 24 7 13 105 59 128 1363 597 707 c 0 0 0 0 0 0 0 280 390 1863 13 2244 2283 0 119 2038 68 208 641 289 g 0 0 0 0 0 0 0 463 327 43 328 15 0 2281 2017 10 2037 428 377 796 t 0 0 0 0 0 0 0 710 1099 351 1797 15 8 4 57 191 65 299 683 506

AT5G05550.DAP_M0772_AthalianaCistrome_shift6 (AT5G05550.DAP:M0772:AthalianaCistrome) 0.859 0.630 5.198 0.930 0.946 227 245 346 126 141 217.000
; assembly_17 versus AT5G05550.DAP_M0772_AthalianaCistrome (AT5G05550.DAP:M0772:AthalianaCistrome); m=2/237; ncol2=15; w=-3; offset=-3; strand=D; shift=6; score= 217; ------hwtytCCGGCGayr ; cor=0.859; Ncor=0.630; logoDP=5.198; NsEucl=0.930; NSW=0.946; rcor=227; rNcor=245; rlogoDP=346; rNsEucl=126; rNSW=141; rank_mean=217.000; match_rank= a 0 0 0 0 0 0 181 192 123 7 86 1 0 0 52 0 35 394 96 184 c 0 0 0 0 0 0 152 81 62 355 9 595 596 0 68 496 17 27 213 75 g 0 0 0 0 0 0 71 98 45 3 123 0 0 596 451 0 543 115 71 259 t 0 0 0 0 0 0 192 225 366 231 378 0 0 0 25 100 1 60 216 78

Zm00001d052229_MA1818.1_JASPAR_rc_shift10 (Zm00001d052229:MA1818.1:JASPAR_rc) 0.873 0.794 4.040 0.923 0.940 174 23 513 191 188 217.800
; assembly_17 versus Zm00001d052229_MA1818.1_JASPAR_rc (Zm00001d052229:MA1818.1:JASPAR_rc); m=3/237; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 217.8; ----------ggCGGCGGcg ; cor=0.873; Ncor=0.794; logoDP=4.040; NsEucl=0.923; NSW=0.940; rcor=174; rNcor=23; rlogoDP=513; rNsEucl=191; rNSW=188; rank_mean=217.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 986 1210 0 0 0 0 0 0 969 1151 c 0 0 0 0 0 0 0 0 0 0 1908 1720 8956 0 0 8956 0 0 5207 2029 g 0 0 0 0 0 0 0 0 0 0 5142 5049 0 8956 8956 0 8956 8956 1587 4801 t 0 0 0 0 0 0 0 0 0 0 920 977 0 0 0 0 0 0 1193 975

AT5G05550.ampDAP_M0775_AthalianaCistrome_shift6 (AT5G05550.ampDAP:M0775:AthalianaCistrome) 0.856 0.628 5.362 0.928 0.943 238 257 318 136 167 223.200
; assembly_17 versus AT5G05550.ampDAP_M0775_AthalianaCistrome (AT5G05550.ampDAP:M0775:AthalianaCistrome); m=4/237; ncol2=15; w=-3; offset=-3; strand=D; shift=6; score= 223.2; ------hwtyTCCGGCGayr ; cor=0.856; Ncor=0.628; logoDP=5.362; NsEucl=0.928; NSW=0.943; rcor=238; rNcor=257; rlogoDP=318; rNsEucl=136; rNSW=167; rank_mean=223.200; match_rank= a 0 0 0 0 0 0 176 222 137 7 59 0 0 0 29 0 45 396 116 185 c 0 0 0 0 0 0 151 56 69 363 7 589 590 0 50 480 8 23 192 50 g 0 0 0 0 0 0 71 105 47 14 103 0 0 590 501 0 537 115 94 278 t 0 0 0 0 0 0 192 207 337 206 421 1 0 0 10 110 0 56 188 77

Carub.0006s0445.1_TRIHELIX_4_AT5G05550_EEAD0616_EEADannot_rc_shift9 (Carub.0006s0445.1_TRIHELIX_4_AT5G05550:EEAD0616:EEADannot_rc) 0.893 0.649 3.843 0.925 0.955 130 194 536 165 112 227.400
; assembly_17 versus Carub.0006s0445.1_TRIHELIX_4_AT5G05550_EEAD0616_EEADannot_rc (Carub.0006s0445.1_TRIHELIX_4_AT5G05550:EEAD0616:EEADannot_rc); m=5/237; ncol2=8; w=0; offset=0; strand=R; shift=9; score= 227.4; ---------yKCCGGyG--- ; cor=0.893; Ncor=0.649; logoDP=3.843; NsEucl=0.925; NSW=0.955; rcor=130; rNcor=194; rlogoDP=536; rNsEucl=165; rNSW=112; rank_mean=227.400; match_rank= a 0 0 0 0 0 0 0 0 0 1 0 3 0 0 18 1 13 0 0 0 c 0 0 0 0 0 0 0 0 0 60 1 88 99 0 0 56 4 0 0 0 g 0 0 0 0 0 0 0 0 0 4 28 7 0 100 76 2 73 0 0 0 t 0 0 0 0 0 0 0 0 0 35 71 2 1 0 6 41 10 0 0 0

ASIL2_UN0352.1_JASPAR_shift7 (ASIL2:UN0352.1:JASPAR) 0.840 0.711 5.078 0.923 0.936 299 87 371 181 235 234.600
; assembly_17 versus ASIL2_UN0352.1_JASPAR (ASIL2:UN0352.1:JASPAR); m=6/237; ncol2=13; w=-2; offset=-2; strand=D; shift=7; score= 234.6; -------wtCTCCGGCGamd ; cor=0.840; Ncor=0.711; logoDP=5.078; NsEucl=0.923; NSW=0.936; rcor=299; rNcor=87; rlogoDP=371; rNsEucl=181; rNSW=235; rank_mean=234.600; match_rank= a 0 0 0 0 0 0 0 480 297 33 74 12 6 14 63 25 83 853 393 393 c 0 0 0 0 0 0 0 168 210 1089 10 1367 1391 2 61 1233 59 144 419 188 g 0 0 0 0 0 0 0 281 210 33 147 14 0 1382 1244 7 1217 228 252 449 t 0 0 0 0 0 0 0 470 682 244 1168 6 2 1 31 134 40 174 335 369

ABR1_MA1244.2_JASPAR_shift8 (ABR1:MA1244.2:JASPAR) 0.823 0.755 5.478 0.920 0.929 379 43 300 234 308 252.800
; assembly_17 versus ABR1_MA1244.2_JASPAR (ABR1:MA1244.2:JASPAR); m=7/237; ncol2=12; w=-1; offset=-1; strand=D; shift=8; score= 252.8; --------rtkrCGGCGGmG ; cor=0.823; Ncor=0.755; logoDP=5.478; NsEucl=0.920; NSW=0.929; rcor=379; rNcor=43; rlogoDP=300; rNsEucl=234; rNSW=308; rank_mean=252.800; match_rank= a 0 0 0 0 0 0 0 0 253 103 59 150 2 0 0 4 5 33 196 66 c 0 0 0 0 0 0 0 0 18 97 15 27 590 0 12 584 10 105 298 36 g 0 0 0 0 0 0 0 0 193 14 308 401 0 598 588 0 550 445 30 421 t 0 0 0 0 0 0 0 0 136 386 218 22 8 2 0 12 35 17 76 77

Solyc06g051120.4.1_TRIHELIX_4_AT5G05550_EEAD0653_EEADannot_rc_shift9 (Solyc06g051120.4.1_TRIHELIX_4_AT5G05550:EEAD0653:EEADannot_rc) 0.821 0.821 3.900 0.925 0.938 390 18 528 166 210 262.400
; assembly_17 versus Solyc06g051120.4.1_TRIHELIX_4_AT5G05550_EEAD0653_EEADannot_rc (Solyc06g051120.4.1_TRIHELIX_4_AT5G05550:EEAD0653:EEADannot_rc); m=8/237; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 262.4; ---------yTCCGGyGAmd ; cor=0.821; Ncor=0.821; logoDP=3.900; NsEucl=0.925; NSW=0.938; rcor=390; rNcor=18; rlogoDP=528; rNsEucl=166; rNSW=210; rank_mean=262.400; match_rank= a 0 0 0 0 0 0 0 0 0 2 4 4 0 1 17 1 18 72 28 28 c 0 0 0 0 0 0 0 0 0 52 7 94 100 0 0 67 6 6 30 11 g 0 0 0 0 0 0 0 0 0 6 17 1 0 99 79 3 74 16 20 36 t 0 0 0 0 0 0 0 0 0 40 72 1 0 0 4 29 2 6 22 25

Zm00001d002364_MA1832.2_JASPAR_rc_shift10 (Zm00001d002364:MA1832.2:JASPAR_rc) 0.854 0.776 4.074 0.915 0.928 248 30 508 290 313 277.800
; assembly_17 versus Zm00001d002364_MA1832.2_JASPAR_rc (Zm00001d002364:MA1832.2:JASPAR_rc); m=9/237; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 277.8; ----------ggCGGCGGCg ; cor=0.854; Ncor=0.776; logoDP=4.074; NsEucl=0.915; NSW=0.928; rcor=248; rNcor=30; rlogoDP=508; rNsEucl=290; rNSW=313; rank_mean=277.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 2034 2750 0 0 0 0 0 0 903 2201 c 0 0 0 0 0 0 0 0 0 0 3763 3546 19090 0 0 19090 0 0 13670 3334 g 0 0 0 0 0 0 0 0 0 0 11352 11009 0 19090 19090 0 19090 19090 2981 11808 t 0 0 0 0 0 0 0 0 0 0 1941 1785 0 0 0 0 0 0 1536 1747

RRTF1.DAP_M0057_AthalianaCistrome_shift5 (RRTF1.DAP:M0057:AthalianaCistrome) 0.829 0.608 5.772 0.921 0.932 352 313 255 207 267 278.800
; assembly_17 versus RRTF1.DAP_M0057_AthalianaCistrome (RRTF1.DAP:M0057:AthalianaCistrome); m=10/237; ncol2=15; w=-4; offset=-4; strand=D; shift=5; score= 278.8; -----raaatkrCGGCGsmg ; cor=0.829; Ncor=0.608; logoDP=5.772; NsEucl=0.921; NSW=0.932; rcor=352; rNcor=313; rlogoDP=255; rNsEucl=207; rNSW=267; rank_mean=278.800; match_rank= a 0 0 0 0 0 185 252 277 386 147 105 219 1 0 0 1 1 22 172 85 c 0 0 0 0 0 99 109 49 6 42 5 31 595 0 0 599 1 166 312 42 g 0 0 0 0 0 233 100 132 101 5 236 315 0 598 600 0 565 389 39 390 t 0 0 0 0 0 83 139 142 107 406 254 35 4 2 0 0 33 23 77 83

AT3G58630.DAP_M0782_AthalianaCistrome_shift5 (AT3G58630.DAP:M0782:AthalianaCistrome) 0.836 0.613 5.289 0.922 0.934 321 295 336 194 252 279.600
; assembly_17 versus AT3G58630.DAP_M0782_AthalianaCistrome (AT3G58630.DAP:M0782:AthalianaCistrome); m=11/237; ncol2=15; w=-4; offset=-4; strand=D; shift=5; score= 279.6; -----ahwtCTCCGGCGAcr ; cor=0.836; Ncor=0.613; logoDP=5.289; NsEucl=0.922; NSW=0.934; rcor=321; rNcor=295; rlogoDP=336; rNsEucl=194; rNSW=252; rank_mean=279.600; match_rank= a 0 0 0 0 0 207 200 215 115 17 43 0 0 0 12 0 63 385 129 162 c 0 0 0 0 0 115 140 41 63 389 16 555 555 0 0 477 25 33 202 64 g 0 0 0 0 0 132 64 99 58 15 56 0 0 555 527 1 446 83 120 199 t 0 0 0 0 0 101 151 200 319 134 440 0 0 0 16 77 21 54 104 130

ESE3.ampDAP_M0061_AthalianaCistrome_shift8 (ESE3.ampDAP:M0061:AthalianaCistrome) 0.828 0.607 5.557 0.921 0.932 355 317 282 206 266 285.200
; assembly_17 versus ESE3.ampDAP_M0061_AthalianaCistrome (ESE3.ampDAP:M0061:AthalianaCistrome); m=12/237; ncol2=15; w=-1; offset=-1; strand=D; shift=8; score= 285.2; --------kygrCGGCGGmG ; cor=0.828; Ncor=0.607; logoDP=5.557; NsEucl=0.921; NSW=0.932; rcor=355; rNcor=317; rlogoDP=282; rNsEucl=206; rNSW=266; rank_mean=285.200; match_rank= a 0 0 0 0 0 0 0 0 132 133 135 156 0 0 3 5 0 9 250 65 c 0 0 0 0 0 0 0 0 35 158 14 25 583 0 2 455 0 63 251 11 g 0 0 0 0 0 0 0 0 276 38 320 366 0 597 595 0 593 517 8 485 t 0 0 0 0 0 0 0 0 157 271 131 53 17 3 0 140 7 11 91 39

ENAP2_MA2040.2_JASPAR_shift9 (ENAP2:MA2040.2:JASPAR) 0.849 0.694 5.141 0.909 0.926 263 115 357 403 343 296.200
; assembly_17 versus ENAP2_MA2040.2_JASPAR (ENAP2:MA2040.2:JASPAR); m=13/237; ncol2=9; w=0; offset=0; strand=D; shift=9; score= 296.2; ---------CTCCGGCGa-- ; cor=0.849; Ncor=0.694; logoDP=5.141; NsEucl=0.909; NSW=0.926; rcor=263; rNcor=115; rlogoDP=357; rNsEucl=403; rNSW=343; rank_mean=296.200; match_rank= a 0 0 0 0 0 0 0 0 0 41 160 24 7 13 105 59 128 1363 0 0 c 0 0 0 0 0 0 0 0 0 1863 13 2244 2283 0 119 2038 68 208 0 0 g 0 0 0 0 0 0 0 0 0 43 328 15 0 2281 2017 10 2037 428 0 0 t 0 0 0 0 0 0 0 0 0 351 1797 15 8 4 57 191 65 299 0 0

VFP5_UN0412.1_JASPAR_rc_shift6 (VFP5:UN0412.1:JASPAR_rc) 0.859 0.630 1.682 0.930 0.946 226 244 770 125 140 301.000
; assembly_17 versus VFP5_UN0412.1_JASPAR_rc (VFP5:UN0412.1:JASPAR_rc); m=14/237; ncol2=15; w=-3; offset=-3; strand=R; shift=6; score= 301; ------hwtytCCGGCGayr ; cor=0.859; Ncor=0.630; logoDP=1.682; NsEucl=0.930; NSW=0.946; rcor=226; rNcor=244; rlogoDP=770; rNsEucl=125; rNSW=140; rank_mean=301.000; match_rank= a 0 0 0 0 0 0 304 322 206 11.745 144 1.678 0 0 87.248 0 58.725 661 161 309 c 0 0 0 0 0 0 255 136 104 596 15.101 998 1000 0 114 832 28.523 45.302 357 126 g 0 0 0 0 0 0 119 164.43 75.503 5.034 206 0 0 1000 757 0 911 193 119 435 t 0 0 0 0 0 0 322 378 614 388 634 0 0 0 41.946 168 1.678 101 362 131

RAP26_MA1221.1_JASPAR_shift9 (RAP26:MA1221.1:JASPAR) 0.825 0.605 5.728 0.919 0.927 368 324 263 244 326 305.000
; assembly_17 versus RAP26_MA1221.1_JASPAR (RAP26:MA1221.1:JASPAR); m=15/237; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 305; ---------tkrCGGCGGmG ; cor=0.825; Ncor=0.605; logoDP=5.728; NsEucl=0.919; NSW=0.927; rcor=368; rNcor=324; rlogoDP=263; rNsEucl=244; rNSW=326; rank_mean=305.000; match_rank= a 0 0 0 0 0 0 0 0 0 103 64 187 1 0 1 8 0 15 197 67 c 0 0 0 0 0 0 0 0 0 139 22 11 574 0 15 567 3 60 310 9 g 0 0 0 0 0 0 0 0 0 18 326 381 0 597 581 0 579 511 14 454 t 0 0 0 0 0 0 0 0 0 337 185 18 22 0 0 22 15 11 76 67

AT3G58630.ampDAP_M0783_AthalianaCistrome_shift5 (AT3G58630.ampDAP:M0783:AthalianaCistrome) 0.825 0.605 5.059 0.921 0.931 366 322 377 219 286 314.000
; assembly_17 versus AT3G58630.ampDAP_M0783_AthalianaCistrome (AT3G58630.ampDAP:M0783:AthalianaCistrome); m=16/237; ncol2=15; w=-4; offset=-4; strand=D; shift=5; score= 314; -----awwtYTCCGGCGacr ; cor=0.825; Ncor=0.605; logoDP=5.059; NsEucl=0.921; NSW=0.931; rcor=366; rNcor=322; rlogoDP=377; rNsEucl=219; rNSW=286; rank_mean=314.000; match_rank= a 0 0 0 0 0 189 198 192 107 16 23 1 0 0 10 1 66 358 112 144 c 0 0 0 0 0 113 123 43 58 367 9 528 532 0 6 435 20 45 216 74 g 0 0 0 0 0 116 64 79 64 8 61 0 0 532 511 6 402 77 105 198 t 0 0 0 0 0 114 147 218 303 141 439 3 0 0 5 90 44 52 99 116

ERF087_MA1247.2_JASPAR_shift10 (ERF087:MA1247.2:JASPAR) 0.820 0.745 6.091 0.908 0.915 401 49 225 427 474 315.200
; assembly_17 versus ERF087_MA1247.2_JASPAR (ERF087:MA1247.2:JASPAR); m=17/237; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 315.2; ----------grCGGCGGmG ; cor=0.820; Ncor=0.745; logoDP=6.091; NsEucl=0.908; NSW=0.915; rcor=401; rNcor=49; rlogoDP=225; rNsEucl=427; rNSW=474; rank_mean=315.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 97 212 8 0 6 0 0 15 200 42 c 0 0 0 0 0 0 0 0 0 0 38 11 577 0 1 586 0 55 314 15 g 0 0 0 0 0 0 0 0 0 0 374 366 0 595 586 0 594 511 11 485 t 0 0 0 0 0 0 0 0 0 0 86 6 10 0 2 9 1 14 70 53

AT1G28160_MA1247.1_JASPAR_shift9 (AT1G28160:MA1247.1:JASPAR) 0.820 0.602 6.094 0.916 0.922 397 340 224 282 391 326.800
; assembly_17 versus AT1G28160_MA1247.1_JASPAR (AT1G28160:MA1247.1:JASPAR); m=18/237; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 326.8; ---------ygrCGGCGGmG ; cor=0.820; Ncor=0.602; logoDP=6.094; NsEucl=0.916; NSW=0.922; rcor=397; rNcor=340; rlogoDP=224; rNsEucl=282; rNSW=391; rank_mean=326.800; match_rank= a 0 0 0 0 0 0 0 0 0 129 97 212 8 0 6 0 0 15 200 42 c 0 0 0 0 0 0 0 0 0 178 38 11 577 0 1 586 0 55 314 15 g 0 0 0 0 0 0 0 0 0 28 374 366 0 595 586 0 594 511 11 485 t 0 0 0 0 0 0 0 0 0 260 86 6 10 0 2 9 1 14 70 53

ERF118_MA1671.1_JASPAR_rc_shift9 (ERF118:MA1671.1:JASPAR_rc) 0.803 0.803 4.460 0.916 0.922 486 20 455 286 397 328.800
; assembly_17 versus ERF118_MA1671.1_JASPAR_rc (ERF118:MA1671.1:JASPAR_rc); m=19/237; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 328.8; ---------ygGCGGCGghg ; cor=0.803; Ncor=0.803; logoDP=4.460; NsEucl=0.916; NSW=0.922; rcor=486; rNcor=20; rlogoDP=455; rNsEucl=286; rNSW=397; rank_mean=328.800; match_rank= a 0 0 0 0 0 0 0 0 0 639 617 48 30 7 1 10 26 482 894 643 c 0 0 0 0 0 0 0 0 0 1537 286 11 3190 3 2 3186 0 354 1143 234 g 0 0 0 0 0 0 0 0 0 292 1903 3338 9 3370 3396 8 3343 2309 385 1819 t 0 0 0 0 0 0 0 0 0 931 593 2 170 19 0 195 30 254 977 703

ASIL2_MA2039.2_JASPAR_shift9 (ASIL2:MA2039.2:JASPAR) 0.840 0.687 5.077 0.907 0.922 301 118 373 457 399 329.600
; assembly_17 versus ASIL2_MA2039.2_JASPAR (ASIL2:MA2039.2:JASPAR); m=20/237; ncol2=9; w=0; offset=0; strand=D; shift=9; score= 329.6; ---------CTCCGGCGa-- ; cor=0.840; Ncor=0.687; logoDP=5.077; NsEucl=0.907; NSW=0.922; rcor=301; rNcor=118; rlogoDP=373; rNsEucl=457; rNSW=399; rank_mean=329.600; match_rank= a 0 0 0 0 0 0 0 0 0 33 74 12 6 14 63 25 83 853 0 0 c 0 0 0 0 0 0 0 0 0 1089 10 1367 1391 2 61 1233 59 144 0 0 g 0 0 0 0 0 0 0 0 0 33 147 14 0 1382 1244 7 1217 228 0 0 t 0 0 0 0 0 0 0 0 0 244 1168 6 2 1 31 134 40 174 0 0

ERF115.ampDAP_M0030_AthalianaCistrome_shift5 (ERF115.ampDAP:M0030:AthalianaCistrome) 0.814 0.597 5.374 0.918 0.926 428 361 315 250 336 338.000
; assembly_17 versus ERF115.ampDAP_M0030_AthalianaCistrome (ERF115.ampDAP:M0030:AthalianaCistrome); m=21/237; ncol2=15; w=-4; offset=-4; strand=D; shift=5; score= 338; -----gmrrykrCGGCGGmg ; cor=0.814; Ncor=0.597; logoDP=5.374; NsEucl=0.918; NSW=0.926; rcor=428; rNcor=361; rlogoDP=315; rNsEucl=250; rNSW=336; rank_mean=338.000; match_rank= a 0 0 0 0 0 137 170 197 281 82 59 176 0 0 0 3 8 45 191 74 c 0 0 0 0 0 60 251 41 10 157 3 9 593 0 0 586 5 117 303 26 g 0 0 0 0 0 339 39 221 223 9 337 397 0 588 598 0 521 422 25 405 t 0 0 0 0 0 62 138 139 84 350 199 16 5 10 0 9 64 14 79 93

Zm00001d020595_MA1821.2_JASPAR_shift10 (Zm00001d020595:MA1821.2:JASPAR) 0.821 0.746 6.783 0.903 0.906 394 48 174 528 567 342.200
; assembly_17 versus Zm00001d020595_MA1821.2_JASPAR (Zm00001d020595:MA1821.2:JASPAR); m=22/237; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 342.2; ----------ggCGGCGGCg ; cor=0.821; Ncor=0.746; logoDP=6.783; NsEucl=0.903; NSW=0.906; rcor=394; rNcor=48; rlogoDP=174; rNsEucl=528; rNSW=567; rank_mean=342.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 856 962 0 0 1 0 0 0 0 759 c 0 0 0 0 0 0 0 0 0 0 1437 1187 7064 0 0 7062 0 0 7056 1193 g 0 0 0 0 0 0 0 0 0 0 3902 4239 0 7064 7061 1 7064 7064 3 4405 t 0 0 0 0 0 0 0 0 0 0 869 676 0 0 2 1 0 0 5 707

LBD19_IG1_AS2_B73_1_m1_EEAD0421_EEADannot_shift12 (LBD19_IG1_AS2_B73_1_m1:EEAD0421:EEADannot) 0.886 0.506 4.484 0.916 0.943 141 699 449 285 166 348.000
; assembly_17 versus LBD19_IG1_AS2_B73_1_m1_EEAD0421_EEADannot (LBD19_IG1_AS2_B73_1_m1:EEAD0421:EEADannot); m=23/237; ncol2=11; w=0; offset=3; strand=D; shift=12; score= 348; ------------CGGCGGCG ; cor=0.886; Ncor=0.506; logoDP=4.484; NsEucl=0.916; NSW=0.943; rcor=141; rNcor=699; rlogoDP=449; rNsEucl=285; rNSW=166; rank_mean=348.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 6 1 5 5 3 15 11 2 c 0 0 0 0 0 0 0 0 0 0 0 0 92 1 0 86 0 7 76 5 g 0 0 0 0 0 0 0 0 0 0 0 0 0 97 90 3 95 70 5 92 t 0 0 0 0 0 0 0 0 0 0 0 0 2 1 5 6 2 8 8 1

Zm00001d005892_MA1819.2_JASPAR_rc_shift12 (Zm00001d005892:MA1819.2:JASPAR_rc) 0.868 0.631 3.481 0.907 0.931 193 238 585 450 281 349.400
; assembly_17 versus Zm00001d005892_MA1819.2_JASPAR_rc (Zm00001d005892:MA1819.2:JASPAR_rc); m=24/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 349.4; ------------CGGCGGCG ; cor=0.868; Ncor=0.631; logoDP=3.481; NsEucl=0.907; NSW=0.931; rcor=193; rNcor=238; rlogoDP=585; rNsEucl=450; rNSW=281; rank_mean=349.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 990 748 1310 722 670 1200 765 872 c 0 0 0 0 0 0 0 0 0 0 0 0 24113 990 1696 25421 917 1794 25046 1309 g 0 0 0 0 0 0 0 0 0 0 0 0 1029 25022 23482 435 25251 23527 767 24431 t 0 0 0 0 0 0 0 0 0 0 0 0 1241 613 885 795 535 852 795 761

LBD13.ampDAP_M0471_AthalianaCistrome_shift12 (LBD13.ampDAP:M0471:AthalianaCistrome) 0.934 0.415 3.578 0.943 0.974 57 1017 573 60 43 350.000
; assembly_17 versus LBD13.ampDAP_M0471_AthalianaCistrome (LBD13.ampDAP:M0471:AthalianaCistrome); m=25/237; ncol2=15; w=0; offset=3; strand=D; shift=12; score= 350; ------------CGsCGgad ; cor=0.934; Ncor=0.415; logoDP=3.578; NsEucl=0.943; NSW=0.974; rcor=57; rNcor=1017; rlogoDP=573; rNsEucl=60; rNSW=43; rank_mean=350.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 34 34 4 17 23 116 298 245 c 0 0 0 0 0 0 0 0 0 0 0 0 494 6 210 581 0 110 94 14 g 0 0 0 0 0 0 0 0 0 0 0 0 4 507 384 0 560 280 106 170 t 0 0 0 0 0 0 0 0 0 0 0 0 66 51 0 0 15 92 100 169

RAP211_MA1266.1_JASPAR_rc_shift9 (RAP211:MA1266.1:JASPAR_rc) 0.840 0.616 0.953 0.927 0.942 300 287 865 141 178 354.200
; assembly_17 versus RAP211_MA1266.1_JASPAR_rc (RAP211:MA1266.1:JASPAR_rc); m=26/237; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 354.2; ---------mGmCGGCgrhg ; cor=0.840; Ncor=0.616; logoDP=0.953; NsEucl=0.927; NSW=0.942; rcor=300; rNcor=287; rlogoDP=865; rNsEucl=141; rNSW=178; rank_mean=354.200; match_rank= a 0 0 0 0 0 0 0 0 0 161 28 147 0 0 0 24 83 208 163 119 c 0 0 0 0 0 0 0 0 0 193 0 329 588 0 0 539 71 42 220 41 g 0 0 0 0 0 0 0 0 0 132 560 112 0 588 588 0 373 323 42 342 t 0 0 0 0 0 0 0 0 0 102 0 0 0 0 0 25 61 15 163 86

Zm00001d020595_MA1821.1_JASPAR_shift10 (Zm00001d020595:MA1821.1:JASPAR) 0.821 0.684 6.783 0.903 0.906 394 126 174 528 567 357.800
; assembly_17 versus Zm00001d020595_MA1821.1_JASPAR (Zm00001d020595:MA1821.1:JASPAR); m=27/237; ncol2=11; w=0; offset=1; strand=D; shift=10; score= 357.8; ----------ggCGGCGGCg ; cor=0.821; Ncor=0.684; logoDP=6.783; NsEucl=0.903; NSW=0.906; rcor=394; rNcor=126; rlogoDP=174; rNsEucl=528; rNSW=567; rank_mean=357.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 856 962 0 0 1 0 0 0 0 759 c 0 0 0 0 0 0 0 0 0 0 1437 1187 7064 0 0 7062 0 0 7056 1193 g 0 0 0 0 0 0 0 0 0 0 3902 4239 0 7064 7061 1 7064 7064 3 4405 t 0 0 0 0 0 0 0 0 0 0 869 676 0 0 2 1 0 0 5 707

AT5G51190_M0040_1.02_CISBP_shift9 (AT5G51190:M0040_1.02:CISBP) 0.859 0.625 4.922 0.903 0.924 223 266 404 540 358 358.200
; assembly_17 versus AT5G51190_M0040_1.02_CISBP (AT5G51190:M0040_1.02:CISBP); m=28/237; ncol2=8; w=0; offset=0; strand=D; shift=9; score= 358.2; ---------kGCCGGCG--- ; cor=0.859; Ncor=0.625; logoDP=4.922; NsEucl=0.903; NSW=0.924; rcor=223; rNcor=266; rlogoDP=404; rNsEucl=540; rNSW=358; rank_mean=358.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 c 0 0 0 0 0 0 0 0 0 13 0 100 93 0 14 100 10 0 0 0 g 0 0 0 0 0 0 0 0 0 25 100 0 7 100 86 0 70 0 0 0 t 0 0 0 0 0 0 0 0 0 62 0 0 0 0 0 0 10 0 0 0

AT3G58630_UN0391.1_JASPAR_rc_shift5 (AT3G58630:UN0391.1:JASPAR_rc) 0.836 0.613 2.242 0.922 0.934 322 296 733 195 253 359.800
; assembly_17 versus AT3G58630_UN0391.1_JASPAR_rc (AT3G58630:UN0391.1:JASPAR_rc); m=29/237; ncol2=15; w=-4; offset=-4; strand=R; shift=5; score= 359.8; -----ahwtCTCCGGCGAcr ; cor=0.836; Ncor=0.613; logoDP=2.242; NsEucl=0.922; NSW=0.934; rcor=322; rNcor=296; rlogoDP=733; rNsEucl=195; rNSW=253; rank_mean=359.800; match_rank= a 0 0 0 0 0 373 360.36 387 207 30.631 77.477 0 0 0 21.622 0 114 694 232 292 c 0 0 0 0 0 207 252 73.874 114 701 28.829 1000 1000 0 0 859 45.045 59.459 364 115 g 0 0 0 0 0 238 115 178 105 27.027 101 0 0 1000 949.55 1.802 804 149.55 216 359 t 0 0 0 0 0 182 272 360.36 575 241 793 0 0 0 28.829 139 37.838 97.297 187 234

ERF105_MA1000.1_JASPAR_shift9 (ERF105:MA1000.1:JASPAR) 0.859 0.624 4.820 0.903 0.925 228 268 419 535 356 361.200
; assembly_17 versus ERF105_MA1000.1_JASPAR (ERF105:MA1000.1:JASPAR); m=30/237; ncol2=8; w=0; offset=0; strand=D; shift=9; score= 361.2; ---------kGCCGGCG--- ; cor=0.859; Ncor=0.624; logoDP=4.820; NsEucl=0.903; NSW=0.925; rcor=228; rNcor=268; rlogoDP=419; rNsEucl=535; rNSW=356; rank_mean=361.200; match_rank= a 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 1 101 0 0 0 c 0 0 0 0 0 0 0 0 0 126 1 998 927 1 143 998 101 0 0 0 g 0 0 0 0 0 0 0 0 0 250 998 1 72 998 855 1 698 0 0 0 t 0 0 0 0 0 0 0 0 0 623 1 1 1 1 1 1 101 0 0 0

RAP2-11_MA1266.2_JASPAR_rc_shift10 (RAP2-11:MA1266.2:JASPAR_rc) 0.844 0.703 0.248 0.921 0.938 280 104 1042 214 212 370.400
; assembly_17 versus RAP2-11_MA1266.2_JASPAR_rc (RAP2-11:MA1266.2:JASPAR_rc); m=31/237; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 370.4; ----------GmCGGCgrhg ; cor=0.844; Ncor=0.703; logoDP=0.248; NsEucl=0.921; NSW=0.938; rcor=280; rNcor=104; rlogoDP=1042; rNsEucl=214; rNSW=212; rank_mean=370.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 28 147 0 0 0 24 83 208 163 119 c 0 0 0 0 0 0 0 0 0 0 0 329 588 0 0 539 71 42 220 41 g 0 0 0 0 0 0 0 0 0 0 560 112 0 588 588 0 373 323 42 342 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 61 15 163 86

ERF3.DAP_M0069_AthalianaCistrome_shift9 (ERF3.DAP:M0069:AthalianaCistrome) 0.807 0.592 5.595 0.914 0.919 467 378 279 309 436 373.800
; assembly_17 versus ERF3.DAP_M0069_AthalianaCistrome (ERF3.DAP:M0069:AthalianaCistrome); m=32/237; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 373.8; ---------ygrCGGCGGmG ; cor=0.807; Ncor=0.592; logoDP=5.595; NsEucl=0.914; NSW=0.919; rcor=467; rNcor=378; rlogoDP=279; rNsEucl=309; rNSW=436; rank_mean=373.800; match_rank= a 0 0 0 0 0 0 0 0 0 125 104 238 8 0 4 0 1 27 185 35 c 0 0 0 0 0 0 0 0 0 150 17 2 569 0 9 560 0 60 333 18 g 0 0 0 0 0 0 0 0 0 15 370 346 0 596 582 0 568 503 9 502 t 0 0 0 0 0 0 0 0 0 306 105 10 19 0 1 36 27 6 69 41

AT3G58630_UN0391.2_JASPAR_rc_shift8 (AT3G58630:UN0391.2:JASPAR_rc) 0.839 0.629 4.600 0.906 0.921 310 250 438 464 412 374.800
; assembly_17 versus AT3G58630_UN0391.2_JASPAR_rc (AT3G58630:UN0391.2:JASPAR_rc); m=33/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 374.8; --------tCTCCGGCGA-- ; cor=0.839; Ncor=0.629; logoDP=4.600; NsEucl=0.906; NSW=0.921; rcor=310; rNcor=250; rlogoDP=438; rNsEucl=464; rNSW=412; rank_mean=374.800; match_rank= a 0 0 0 0 0 0 0 0 207 31 77 0 0 0 22 0 114 694 0 0 c 0 0 0 0 0 0 0 0 114 701 29 1000 1000 0 0 859 45 59 0 0 g 0 0 0 0 0 0 0 0 105 27 101 0 0 1000 950 2 804 150 0 0 t 0 0 0 0 0 0 0 0 575 241 793 0 0 0 29 139 38 97 0 0

LEP_MA1246.2_JASPAR_rc_shift10 (LEP:MA1246.2:JASPAR_rc) 0.821 0.747 2.845 0.911 0.920 391 46 667 372 417 378.600
; assembly_17 versus LEP_MA1246.2_JASPAR_rc (LEP:MA1246.2:JASPAR_rc); m=34/237; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 378.6; ----------grCGGCGGmG ; cor=0.821; Ncor=0.747; logoDP=2.845; NsEucl=0.911; NSW=0.920; rcor=391; rNcor=46; rlogoDP=667; rNsEucl=372; rNSW=417; rank_mean=378.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 90 157 7 1 10 8 0 36 172 32 c 0 0 0 0 0 0 0 0 0 0 22 20 460 0 0 456 0 52 226 9 g 0 0 0 0 0 0 0 0 0 0 303 301 0 489 480 0 488 398 23 413 t 0 0 0 0 0 0 0 0 0 0 75 12 23 0 0 26 2 4 69 36

Zm00001d002364_MA1832.1_JASPAR_rc_shift10 (Zm00001d002364:MA1832.1:JASPAR_rc) 0.854 0.712 0.368 0.915 0.928 248 83 971 290 313 381.000
; assembly_17 versus Zm00001d002364_MA1832.1_JASPAR_rc (Zm00001d002364:MA1832.1:JASPAR_rc); m=35/237; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 381; ----------ggCGGCGGCg ; cor=0.854; Ncor=0.712; logoDP=0.368; NsEucl=0.915; NSW=0.928; rcor=248; rNcor=83; rlogoDP=971; rNsEucl=290; rNSW=313; rank_mean=381.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 2034 2750 0 0 0 0 0 0 903 2201 c 0 0 0 0 0 0 0 0 0 0 3763 3546 19090 0 0 19090 0 0 13670 3334 g 0 0 0 0 0 0 0 0 0 0 11352 11009 0 19090 19090 0 19090 19090 2981 11808 t 0 0 0 0 0 0 0 0 0 0 1941 1785 0 0 0 0 0 0 1536 1747

NtERF2_NtERF2_Athamap_rc_shift13 (NtERF2:NtERF2:Athamap_rc) 0.871 0.554 1.592 0.915 0.949 183 522 785 294 132 383.200
; assembly_17 versus NtERF2_NtERF2_Athamap_rc (NtERF2:NtERF2:Athamap_rc); m=36/237; ncol2=7; w=0; offset=4; strand=R; shift=13; score= 383.2; -------------GGCGGCr ; cor=0.871; Ncor=0.554; logoDP=1.592; NsEucl=0.915; NSW=0.949; rcor=183; rNcor=522; rlogoDP=785; rNsEucl=294; rNSW=132; rank_mean=383.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 4 c 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 13 2 3 12 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 13 10 0 11 10 1 7 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 1 0 2

RRTF1.ampDAP_M0066_AthalianaCistrome_shift4 (RRTF1.ampDAP:M0066:AthalianaCistrome) 0.824 0.477 5.692 0.921 0.932 375 793 267 211 270 383.200
; assembly_17 versus RRTF1.ampDAP_M0066_AthalianaCistrome (RRTF1.ampDAP:M0066:AthalianaCistrome); m=37/237; ncol2=19; w=-5; offset=-5; strand=D; shift=4; score= 383.2; ----rraaAWkrCGGCGsmg ; cor=0.824; Ncor=0.477; logoDP=5.692; NsEucl=0.921; NSW=0.932; rcor=375; rNcor=793; rlogoDP=267; rNsEucl=211; rNSW=270; rank_mean=383.200; match_rank= a 0 0 0 0 149 174 276 301 441 152 111 202 0 0 0 0 0 23 184 115 c 0 0 0 0 87 105 104 31 0 13 0 14 578 0 0 578 0 173 256 55 g 0 0 0 0 206 207 93 140 62 2 204 328 0 576 578 0 523 352 50 302 t 0 0 0 0 136 92 105 106 75 411 263 34 0 2 0 0 55 30 88 106

AT3G11100_UN0353.1_JASPAR_shift9 (AT3G11100:UN0353.1:JASPAR) 0.771 0.706 4.843 0.914 0.919 665 100 415 305 432 383.400
; assembly_17 versus AT3G11100_UN0353.1_JASPAR (AT3G11100:UN0353.1:JASPAR); m=38/237; ncol2=12; w=0; offset=0; strand=D; shift=9; score= 383.4; ---------ygmCGGCGAsr ; cor=0.771; Ncor=0.706; logoDP=4.843; NsEucl=0.914; NSW=0.919; rcor=665; rNcor=100; rlogoDP=415; rNsEucl=305; rNSW=432; rank_mean=383.400; match_rank= a 0 0 0 0 0 0 0 0 0 479 615 1432 16 24 57 102 73 2127 355 760 c 0 0 0 0 0 0 0 0 0 1021 330 652 2413 13 26 2298 55 58 653 289 g 0 0 0 0 0 0 0 0 0 300 1002 254 6 2445 2394 12 2311 198 886 875 t 0 0 0 0 0 0 0 0 0 696 549 158 61 14 19 84 57 113 602 572

ERF8_MA0994.3_JASPAR_shift9 (ERF8:MA0994.3:JASPAR) 0.785 0.785 5.297 0.908 0.907 581 25 331 422 561 384.000
; assembly_17 versus ERF8_MA0994.3_JASPAR (ERF8:MA0994.3:JASPAR); m=39/237; ncol2=11; w=0; offset=0; strand=D; shift=9; score= 384; ---------tgrCGGCGGCG ; cor=0.785; Ncor=0.785; logoDP=5.297; NsEucl=0.908; NSW=0.907; rcor=581; rNcor=25; rlogoDP=331; rNsEucl=422; rNSW=561; rank_mean=384.000; match_rank= a 0 0 0 0 0 0 0 0 0 116 103 426 32 3 16 11 6 16 108 21 c 0 0 0 0 0 0 0 0 0 180 50 29 649 3 9 701 2 46 537 9 g 0 0 0 0 0 0 0 0 0 33 491 252 5 728 714 0 728 667 11 674 t 0 0 0 0 0 0 0 0 0 414 99 36 57 9 4 31 7 14 87 39

ERF122_MA1261.2_JASPAR_shift10 (ERF122:MA1261.2:JASPAR) 0.784 0.712 4.263 0.911 0.920 588 80 480 371 416 387.000
; assembly_17 versus ERF122_MA1261.2_JASPAR (ERF122:MA1261.2:JASPAR); m=40/237; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 387; ----------yrCGGCkGhk ; cor=0.784; Ncor=0.712; logoDP=4.263; NsEucl=0.911; NSW=0.920; rcor=588; rNcor=80; rlogoDP=480; rNsEucl=371; rNSW=416; rank_mean=387.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 10 55 0 0 0 0 0 25 41 0 c 0 0 0 0 0 0 0 0 0 0 35 0 120 0 0 106 3 0 53 10 g 0 0 0 0 0 0 0 0 0 0 16 80 0 136 138 0 89 106 9 91 t 0 0 0 0 0 0 0 0 0 0 77 3 18 2 0 32 46 7 35 37

AT5G23930_UN0357.2_JASPAR_rc_shift12 (AT5G23930:UN0357.2:JASPAR_rc) 0.863 0.627 4.189 0.901 0.921 217 258 486 581 407 389.800
; assembly_17 versus AT5G23930_UN0357.2_JASPAR_rc (AT5G23930:UN0357.2:JASPAR_rc); m=41/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 389.8; ------------yGGCGGCk ; cor=0.863; Ncor=0.627; logoDP=4.189; NsEucl=0.901; NSW=0.921; rcor=217; rNcor=258; rlogoDP=486; rNsEucl=581; rNSW=407; rank_mean=389.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 296 0 0 0 0 0 0 125 c 0 0 0 0 0 0 0 0 0 0 0 0 1135 0 0 2074 0 0 2074 91 g 0 0 0 0 0 0 0 0 0 0 0 0 43 2074 2074 0 2074 2074 0 1323 t 0 0 0 0 0 0 0 0 0 0 0 0 600 0 0 0 0 0 0 535

PUCHI_MA1252.1_JASPAR_rc_shift9 (PUCHI:MA1252.1:JASPAR_rc) 0.832 0.610 1.598 0.920 0.930 342 308 784 224 300 391.600
; assembly_17 versus PUCHI_MA1252.1_JASPAR_rc (PUCHI:MA1252.1:JASPAR_rc); m=42/237; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 391.6; ---------hrrCGGCGGmG ; cor=0.832; Ncor=0.610; logoDP=1.598; NsEucl=0.920; NSW=0.930; rcor=342; rNcor=308; rlogoDP=784; rNsEucl=224; rNSW=300; rank_mean=391.600; match_rank= a 0 0 0 0 0 0 0 0 0 124 126 199 6 0 9 1 0 20 163 42 c 0 0 0 0 0 0 0 0 0 123 34 11 459 0 1 469 0 61 256 0 g 0 0 0 0 0 0 0 0 0 37 214 260 0 475 466 0 477 397 0 397 t 0 0 0 0 0 0 0 0 0 194 104 8 13 3 2 8 1 0 59 39

ERF6_MA1006.2_JASPAR_shift9 (ERF6:MA1006.2:JASPAR) 0.887 0.564 4.976 0.898 0.927 138 483 394 638 325 395.600
; assembly_17 versus ERF6_MA1006.2_JASPAR (ERF6:MA1006.2:JASPAR); m=43/237; ncol2=7; w=0; offset=0; strand=D; shift=9; score= 395.6; ---------tGCCGGC---- ; cor=0.887; Ncor=0.564; logoDP=4.976; NsEucl=0.898; NSW=0.927; rcor=138; rNcor=483; rlogoDP=394; rNsEucl=638; rNSW=325; rank_mean=395.600; match_rank= a 0 0 0 0 0 0 0 0 0 78 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 221 0 1000 1000 0 88 1000 0 0 0 0 g 0 0 0 0 0 0 0 0 0 166 1000 0 0 1000 912 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 535 0 0 0 0 0 0 0 0 0 0

ABR1_MA1244.1_JASPAR_shift1 (ABR1:MA1244.1:JASPAR) 0.823 0.477 5.478 0.920 0.929 379 794 300 234 308 403.000
; assembly_17 versus ABR1_MA1244.1_JASPAR (ABR1:MA1244.1:JASPAR); m=44/237; ncol2=19; w=-8; offset=-8; strand=D; shift=1; score= 403; -ggcgradrtkrCGGCGGmG ; cor=0.823; Ncor=0.477; logoDP=5.478; NsEucl=0.920; NSW=0.929; rcor=379; rNcor=794; rlogoDP=300; rNsEucl=234; rNSW=308; rank_mean=403.000; match_rank= a 0 122 145 140 100 181 237 225 253 103 59 150 2 0 0 4 5 33 196 66 c 0 57 75 230 64 79 149 26 18 97 15 27 590 0 12 584 10 105 298 36 g 0 317 281 96 308 285 79 186 193 14 308 401 0 598 588 0 550 445 30 421 t 0 104 99 134 128 55 135 163 136 386 218 22 8 2 0 12 35 17 76 77

ORA59_M0005_1.02_CISBP_rc_shift12 (ORA59:M0005_1.02:CISBP_rc) 0.848 0.617 3.630 0.902 0.924 265 283 567 552 377 408.800
; assembly_17 versus ORA59_M0005_1.02_CISBP_rc (ORA59:M0005_1.02:CISBP_rc); m=45/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 408.8; ------------cGGCGGCk ; cor=0.848; Ncor=0.617; logoDP=3.630; NsEucl=0.902; NSW=0.924; rcor=265; rNcor=283; rlogoDP=567; rNsEucl=552; rNSW=377; rank_mean=408.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 48 0 5 98 0 0 100 19 g 0 0 0 0 0 0 0 0 0 0 0 0 11 100 95 0 88 100 0 46 t 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 2 12 0 0 35

ERF094_MA1049.1_JASPAR_rc_shift12 (ERF094:MA1049.1:JASPAR_rc) 0.848 0.617 3.600 0.902 0.924 266 284 570 550 376 409.200
; assembly_17 versus ERF094_MA1049.1_JASPAR_rc (ERF094:MA1049.1:JASPAR_rc); m=46/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 409.2; ------------cGGCGGCk ; cor=0.848; Ncor=0.617; logoDP=3.600; NsEucl=0.902; NSW=0.924; rcor=266; rNcor=284; rlogoDP=570; rNsEucl=550; rNSW=376; rank_mean=409.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 173 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 482 0 49 975 0 0 999 192 g 0 0 0 0 0 0 0 0 0 0 0 0 104 999 951 0 877 999 0 461 t 0 0 0 0 0 0 0 0 0 0 0 0 241 0 0 25 122 0 0 346

AT5G67000_MA1261.1_JASPAR_shift6 (AT5G67000:MA1261.1:JASPAR) 0.784 0.575 4.265 0.918 0.927 587 444 478 248 330 417.400
; assembly_17 versus AT5G67000_MA1261.1_JASPAR (AT5G67000:MA1261.1:JASPAR); m=47/237; ncol2=15; w=-3; offset=-3; strand=D; shift=6; score= 417.4; ------ykdwyrCGGCkGhk ; cor=0.784; Ncor=0.575; logoDP=4.265; NsEucl=0.918; NSW=0.927; rcor=587; rNcor=444; rlogoDP=478; rNsEucl=248; rNSW=330; rank_mean=417.400; match_rank= a 0 0 0 0 0 0 34 26 39 40 10 55 0 0 0 0 0 25 41 0 c 0 0 0 0 0 0 47 20 7 30 35 0 120 0 0 106 3 0 53 10 g 0 0 0 0 0 0 15 42 57 14 16 80 0 136 138 0 89 106 9 91 t 0 0 0 0 0 0 42 50 35 54 77 3 18 2 0 32 46 7 35 37

LOB_MA2022.2_JASPAR_rc_shift8 (LOB:MA2022.2:JASPAR_rc) 0.790 0.668 4.156 0.910 0.911 549 154 497 389 515 420.800
; assembly_17 versus LOB_MA2022.2_JASPAR_rc (LOB:MA2022.2:JASPAR_rc); m=48/237; ncol2=13; w=-1; offset=-1; strand=R; shift=8; score= 420.8; --------gckGCGGCGGCG ; cor=0.790; Ncor=0.668; logoDP=4.156; NsEucl=0.910; NSW=0.911; rcor=549; rNcor=154; rlogoDP=497; rNsEucl=389; rNSW=515; rank_mean=420.800; match_rank= a 0 0 0 0 0 0 0 0 113 101 103 50 24 27 16 23 24 18 133 86 c 0 0 0 0 0 0 0 0 71 532 44 38 733 8 7 729 4 10 552 24 g 0 0 0 0 0 0 0 0 538 33 398 693 1 721 768 4 739 760 18 569 t 0 0 0 0 0 0 0 0 73 129 250 14 37 39 4 39 28 7 92 116

CRF10.DAP_M0045_AthalianaCistrome_rc_shift9 (CRF10.DAP:M0045:AthalianaCistrome_rc) 0.820 0.601 1.692 0.918 0.925 398 341 769 253 351 422.400
; assembly_17 versus CRF10.DAP_M0045_AthalianaCistrome_rc (CRF10.DAP:M0045:AthalianaCistrome_rc); m=49/237; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 422.4; ---------ygRCGGCGGmG ; cor=0.820; Ncor=0.601; logoDP=1.692; NsEucl=0.918; NSW=0.925; rcor=398; rNcor=341; rlogoDP=769; rNsEucl=253; rNSW=351; rank_mean=422.400; match_rank= a 0 0 0 0 0 0 0 0 0 126 133 161 18 0 10 1 0 11 195 41 c 0 0 0 0 0 0 0 0 0 182 58 6 549 0 0 553 7 38 319 8 g 0 0 0 0 0 0 0 0 0 37 289 432 0 600 590 0 578 547 7 485 t 0 0 0 0 0 0 0 0 0 255 120 1 33 0 0 46 15 4 79 66

ERF086_MA1252.2_JASPAR_rc_shift11 (ERF086:MA1252.2:JASPAR_rc) 0.836 0.627 3.338 0.905 0.918 320 259 599 496 441 423.000
; assembly_17 versus ERF086_MA1252.2_JASPAR_rc (ERF086:MA1252.2:JASPAR_rc); m=50/237; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 423; -----------rCGGCGGmG ; cor=0.836; Ncor=0.627; logoDP=3.338; NsEucl=0.905; NSW=0.918; rcor=320; rNcor=259; rlogoDP=599; rNsEucl=496; rNSW=441; rank_mean=423.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 199 6 0 9 1 0 20 163 42 c 0 0 0 0 0 0 0 0 0 0 0 11 459 0 1 469 0 61 256 0 g 0 0 0 0 0 0 0 0 0 0 0 260 0 475 466 0 477 397 0 397 t 0 0 0 0 0 0 0 0 0 0 0 8 13 3 2 8 1 0 59 39

ERF15_MA1231.3_JASPAR_rc_shift12 (ERF15:MA1231.3:JASPAR_rc) 0.848 0.616 3.577 0.901 0.921 272 285 574 582 409 424.400
; assembly_17 versus ERF15_MA1231.3_JASPAR_rc (ERF15:MA1231.3:JASPAR_rc); m=51/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 424.4; ------------hGGCGGCk ; cor=0.848; Ncor=0.616; logoDP=3.577; NsEucl=0.901; NSW=0.921; rcor=272; rNcor=285; rlogoDP=574; rNsEucl=582; rNSW=409; rank_mean=424.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 581 8 39 12 9 5 18 87 c 0 0 0 0 0 0 0 0 0 0 0 0 911 8 14 2067 3 1 2078 94 g 0 0 0 0 0 0 0 0 0 0 0 0 62 2107 2066 3 2062 2124 7 942 t 0 0 0 0 0 0 0 0 0 0 0 0 579 10 14 51 59 3 30 1010

LBD18_MA1673.2_JASPAR_rc_shift8 (LBD18:MA1673.2:JASPAR_rc) 0.901 0.526 0.315 0.916 0.951 111 611 994 278 129 424.600
; assembly_17 versus LBD18_MA1673.2_JASPAR_rc (LBD18:MA1673.2:JASPAR_rc); m=52/237; ncol2=8; w=-1; offset=-1; strand=R; shift=8; score= 424.6; --------TTTCCGGC---- ; cor=0.901; Ncor=0.526; logoDP=0.315; NsEucl=0.916; NSW=0.951; rcor=111; rNcor=611; rlogoDP=994; rNsEucl=278; rNSW=129; rank_mean=424.600; match_rank= a 0 0 0 0 0 0 0 0 679 668 240 251 166 153 130 286 0 0 0 0 c 0 0 0 0 0 0 0 0 384 1009 159 5338 5531 316 290 4833 0 0 0 0 g 0 0 0 0 0 0 0 0 472 191 93 171 40 5168 5323 245 0 0 0 0 t 0 0 0 0 0 0 0 0 4330 3997 5373 105 128 228 122 501 0 0 0 0

LOB.DAP_M0473_AthalianaCistrome_rc_shift10 (LOB.DAP:M0473:AthalianaCistrome_rc) 0.880 0.400 2.383 0.936 0.959 153 1088 729 98 94 432.400
; assembly_17 versus LOB.DAP_M0473_AthalianaCistrome_rc (LOB.DAP:M0473:AthalianaCistrome_rc); m=53/237; ncol2=21; w=0; offset=1; strand=R; shift=10; score= 432.4; ----------kgCGGCGGmg ; cor=0.880; Ncor=0.400; logoDP=2.383; NsEucl=0.936; NSW=0.959; rcor=153; rNcor=1088; rlogoDP=729; rNsEucl=98; rNSW=94; rank_mean=432.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 115 117 56 53 25 53 19 51 242 133 c 0 0 0 0 0 0 0 0 0 0 72 114 452 7 115 507 2 20 202 3 g 0 0 0 0 0 0 0 0 0 0 229 296 4 471 428 0 526 446 45 351 t 0 0 0 0 0 0 0 0 0 0 157 46 61 42 5 13 26 56 84 86

ERF073_MA1754.2_JASPAR_rc_shift9 (ERF073:MA1754.2:JASPAR_rc) 0.778 0.778 4.886 0.905 0.901 624 28 408 486 629 435.000
; assembly_17 versus ERF073_MA1754.2_JASPAR_rc (ERF073:MA1754.2:JASPAR_rc); m=54/237; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 435; ---------yGGCGGCGGmg ; cor=0.778; Ncor=0.778; logoDP=4.886; NsEucl=0.905; NSW=0.901; rcor=624; rNcor=28; rlogoDP=408; rNsEucl=486; rNSW=629; rank_mean=435.000; match_rank= a 0 0 0 0 0 0 0 0 0 114 55 52 12 0 7 0 0 69 366 142 c 0 0 0 0 0 0 0 0 0 380 14 0 975 0 0 968 0 155 377 28 g 0 0 0 0 0 0 0 0 0 0 837 948 0 1000 993 0 975 742 89 648 t 0 0 0 0 0 0 0 0 0 506 94 0 12 0 0 32 25 34 169 181

ERF13_MA1004.2_JASPAR_rc_shift13 (ERF13:MA1004.2:JASPAR_rc) 0.873 0.556 2.435 0.903 0.935 175 519 725 523 241 436.600
; assembly_17 versus ERF13_MA1004.2_JASPAR_rc (ERF13:MA1004.2:JASPAR_rc); m=55/237; ncol2=7; w=0; offset=4; strand=R; shift=13; score= 436.6; -------------GgCGGCs ; cor=0.873; Ncor=0.556; logoDP=2.435; NsEucl=0.903; NSW=0.935; rcor=175; rNcor=519; rlogoDP=725; rNsEucl=523; rNSW=241; rank_mean=436.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 113 0 0 0 0 22 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 145 983 16 32 951 283 g 0 0 0 0 0 0 0 0 0 0 0 0 0 999 645 16 983 951 49 478 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 97 0 0 16 0 217

DEAR3_MA1376.2_JASPAR_rc_shift13 (DEAR3:MA1376.2:JASPAR_rc) 0.855 0.544 1.381 0.909 0.942 244 556 800 413 176 437.800
; assembly_17 versus DEAR3_MA1376.2_JASPAR_rc (DEAR3:MA1376.2:JASPAR_rc); m=56/237; ncol2=7; w=0; offset=4; strand=R; shift=13; score= 437.8; -------------GkCGGyG ; cor=0.855; Ncor=0.544; logoDP=1.381; NsEucl=0.909; NSW=0.942; rcor=244; rNcor=556; rlogoDP=800; rNsEucl=413; rNSW=176; rank_mean=437.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 34 101 26 8 26 17 41 c 0 0 0 0 0 0 0 0 0 0 0 0 0 68 56 865 19 58 634 24 g 0 0 0 0 0 0 0 0 0 0 0 0 0 828 524 44 934 889 15 787 t 0 0 0 0 0 0 0 0 0 0 0 0 0 70 320 66 39 27 335 148

AS2.DAP_M0477_AthalianaCistrome_rc_shift0 (AS2.DAP:M0477:AthalianaCistrome_rc) 0.855 0.448 0.988 0.936 0.955 246 902 859 96 110 442.600
; assembly_17 versus AS2.DAP_M0477_AthalianaCistrome_rc (AS2.DAP:M0477:AthalianaCistrome_rc); m=57/237; ncol2=21; w=-9; offset=-9; strand=R; shift=0; score= 442.6; CGsCGgmrrwkrCGGcGgmg ; cor=0.855; Ncor=0.448; logoDP=0.988; NsEucl=0.936; NSW=0.955; rcor=246; rNcor=902; rlogoDP=859; rNsEucl=96; rNSW=110; rank_mean=442.600; match_rank= a 36 39 16 22 9 69 209 166 189 180 97 126 54 2 0 99 34 104 178 94 c 319 16 133 411 0 18 110 10 22 102 52 51 357 2 65 275 10 18 123 26 g 8 350 287 1 407 298 55 192 155 16 163 233 0 433 372 14 362 272 47 221 t 76 34 3 5 23 54 65 71 73 141 127 29 28 2 2 51 33 45 91 98

AT1G28160.ampDAP_M0035_AthalianaCistrome_rc_shift9 (AT1G28160.ampDAP:M0035:AthalianaCistrome_rc) 0.801 0.629 2.860 0.912 0.915 499 247 664 339 470 443.800
; assembly_17 versus AT1G28160.ampDAP_M0035_AthalianaCistrome_rc (AT1G28160.ampDAP:M0035:AthalianaCistrome_rc); m=58/237; ncol2=14; w=0; offset=0; strand=R; shift=9; score= 443.8; ---------yGrCGGCGGmG ; cor=0.801; Ncor=0.629; logoDP=2.860; NsEucl=0.912; NSW=0.915; rcor=499; rNcor=247; rlogoDP=664; rNsEucl=339; rNSW=470; rank_mean=443.800; match_rank= a 0 0 0 0 0 0 0 0 0 94 84 199 0 0 0 15 0 26 170 74 c 0 0 0 0 0 0 0 0 0 243 16 6 585 0 0 550 0 105 327 7 g 0 0 0 0 0 0 0 0 0 0 428 381 0 590 592 0 581 447 4 465 t 0 0 0 0 0 0 0 0 0 255 64 6 7 2 0 27 11 14 91 46

ERF094_MA1049.2_JASPAR_rc_shift13 (ERF094:MA1049.2:JASPAR_rc) 0.882 0.562 2.756 0.900 0.930 149 501 688 597 298 446.600
; assembly_17 versus ERF094_MA1049.2_JASPAR_rc (ERF094:MA1049.2:JASPAR_rc); m=59/237; ncol2=7; w=0; offset=4; strand=R; shift=13; score= 446.6; -------------GGCGGCk ; cor=0.882; Ncor=0.562; logoDP=2.756; NsEucl=0.900; NSW=0.930; rcor=149; rNcor=501; rlogoDP=688; rNsEucl=597; rNSW=298; rank_mean=446.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 975 0 0 999 192 g 0 0 0 0 0 0 0 0 0 0 0 0 0 999 951 0 877 999 0 461 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 122 0 0 346

LBD16_RA2_B73_1_m1_EEAD0419_EEADannot_rc_shift12 (LBD16_RA2_B73_1_m1:EEAD0419:EEADannot_rc) 0.904 0.402 1.917 0.923 0.953 105 1075 756 184 119 447.800
; assembly_17 versus LBD16_RA2_B73_1_m1_EEAD0419_EEADannot_rc (LBD16_RA2_B73_1_m1:EEAD0419:EEADannot_rc); m=60/237; ncol2=15; w=0; offset=3; strand=R; shift=12; score= 447.8; ------------CGGCGGCG ; cor=0.904; Ncor=0.402; logoDP=1.917; NsEucl=0.923; NSW=0.953; rcor=105; rNcor=1075; rlogoDP=756; rNsEucl=184; rNSW=119; rank_mean=447.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 4 3 1 8 1 3 15 6 c 0 0 0 0 0 0 0 0 0 0 0 0 89 2 11 89 1 11 74 6 g 0 0 0 0 0 0 0 0 0 0 0 0 5 94 88 2 96 81 7 84 t 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 1 2 5 4 4

ERF003_UN0363.1_JASPAR_rc_shift10 (ERF003:UN0363.1:JASPAR_rc) 0.830 0.593 1.639 0.912 0.922 349 371 777 349 393 447.800
; assembly_17 versus ERF003_UN0363.1_JASPAR_rc (ERF003:UN0363.1:JASPAR_rc); m=61/237; ncol2=13; w=0; offset=1; strand=R; shift=10; score= 447.8; ----------ggCGGCGGaG ; cor=0.830; Ncor=0.593; logoDP=1.639; NsEucl=0.912; NSW=0.922; rcor=349; rNcor=371; rlogoDP=777; rNsEucl=349; rNSW=393; rank_mean=447.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 427 484 50 7 23 119 17 14 1442 95 c 0 0 0 0 0 0 0 0 0 0 166 214 2055 4 52 1796 4 31 463 23 g 0 0 0 0 0 0 0 0 0 0 1095 1288 4 2165 2086 9 2127 2112 19 1992 t 0 0 0 0 0 0 0 0 0 0 489 191 68 1 16 253 29 20 253 67

ERF3.ampDAP_M0074_AthalianaCistrome_shift9 (ERF3.ampDAP:M0074:AthalianaCistrome) 0.812 0.447 5.494 0.918 0.925 440 906 296 255 353 450.000
; assembly_17 versus ERF3.ampDAP_M0074_AthalianaCistrome (ERF3.ampDAP:M0074:AthalianaCistrome); m=62/237; ncol2=20; w=0; offset=0; strand=D; shift=9; score= 450; ---------yGrCGGCGGmg ; cor=0.812; Ncor=0.447; logoDP=5.494; NsEucl=0.918; NSW=0.925; rcor=440; rNcor=906; rlogoDP=296; rNsEucl=255; rNSW=353; rank_mean=450.000; match_rank= a 0 0 0 0 0 0 0 0 0 87 58 182 0 0 2 2 0 51 205 104 c 0 0 0 0 0 0 0 0 0 164 9 5 557 0 2 556 0 87 214 16 g 0 0 0 0 0 0 0 0 0 9 399 376 0 567 563 0 504 398 34 370 t 0 0 0 0 0 0 0 0 0 307 101 4 10 0 0 9 63 31 114 77

AT2G33710_M0018_1.02_CISBP_rc_shift9 (AT2G33710:M0018_1.02:CISBP_rc) 0.790 0.718 0.327 0.914 0.926 554 73 988 306 334 451.000
; assembly_17 versus AT2G33710_M0018_1.02_CISBP_rc (AT2G33710:M0018_1.02:CISBP_rc); m=63/237; ncol2=10; w=0; offset=0; strand=R; shift=9; score= 451; ---------tggCGGCgsc- ; cor=0.790; Ncor=0.718; logoDP=0.327; NsEucl=0.914; NSW=0.926; rcor=554; rNcor=73; rlogoDP=988; rNsEucl=306; rNSW=334; rank_mean=451.000; match_rank= a 0 0 0 0 0 0 0 0 0 15 7 21 3 0 0 7 5 11 18 0 c 0 0 0 0 0 0 0 0 0 24 4 10 90 0 0 92 12 35 39 0 g 0 0 0 0 0 0 0 0 0 13 66 52 3 96 100 0 61 44 24 0 t 0 0 0 0 0 0 0 0 0 48 23 17 4 4 0 1 22 10 19 0

ERF112_MA1002.1_JASPAR_rc_shift9 (ERF112:MA1002.1:JASPAR_rc) 0.789 0.717 0.325 0.914 0.927 561 77 991 304 333 453.200
; assembly_17 versus ERF112_MA1002.1_JASPAR_rc (ERF112:MA1002.1:JASPAR_rc); m=64/237; ncol2=10; w=0; offset=0; strand=R; shift=9; score= 453.2; ---------tggCGGCgsc- ; cor=0.789; Ncor=0.717; logoDP=0.325; NsEucl=0.914; NSW=0.927; rcor=561; rNcor=77; rlogoDP=991; rNsEucl=304; rNSW=333; rank_mean=453.200; match_rank= a 0 0 0 0 0 0 0 0 0 150 67 211 33 3 1 72 54 118 180 0 c 0 0 0 0 0 0 0 0 0 240 37 101 903 4 2 913 117 346 392 0 g 0 0 0 0 0 0 0 0 0 133 661 518 28 951 997 1 605 436 240 0 t 0 0 0 0 0 0 0 0 0 478 236 171 36 42 0 15 223 100 189 0

ERF11.DAP_M0039_AthalianaCistrome_rc_shift9 (ERF11.DAP:M0039:AthalianaCistrome_rc) 0.813 0.596 1.630 0.915 0.921 435 363 779 288 403 453.600
; assembly_17 versus ERF11.DAP_M0039_AthalianaCistrome_rc (ERF11.DAP:M0039:AthalianaCistrome_rc); m=65/237; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 453.6; ---------tgrCGGCGGmG ; cor=0.813; Ncor=0.596; logoDP=1.630; NsEucl=0.915; NSW=0.921; rcor=435; rNcor=363; rlogoDP=779; rNsEucl=288; rNSW=403; rank_mean=453.600; match_rank= a 0 0 0 0 0 0 0 0 0 124 106 230 16 0 13 0 0 14 191 38 c 0 0 0 0 0 0 0 0 0 137 24 8 541 0 9 571 1 54 319 4 g 0 0 0 0 0 0 0 0 0 20 353 351 0 596 574 0 584 524 3 501 t 0 0 0 0 0 0 0 0 0 315 113 7 39 0 0 25 11 4 83 53

ERF9_MA1257.2_JASPAR_shift1 (ERF9:MA1257.2:JASPAR) 0.811 0.469 5.110 0.917 0.924 453 828 361 265 370 455.400
; assembly_17 versus ERF9_MA1257.2_JASPAR (ERF9:MA1257.2:JASPAR); m=66/237; ncol2=19; w=-8; offset=-8; strand=D; shift=1; score= 455.4; -ggcggmkryGrCGGCGGmG ; cor=0.811; Ncor=0.469; logoDP=5.110; NsEucl=0.917; NSW=0.924; rcor=453; rNcor=828; rlogoDP=361; rNsEucl=265; rNSW=370; rank_mean=455.400; match_rank= a 0 89 109 106 83 106 143 104 161 111 73 167 26 0 10 16 4 31 204 52 c 0 24 50 265 32 63 239 32 37 167 6 15 496 0 0 493 0 34 253 8 g 0 353 336 69 343 333 39 269 270 17 383 360 0 551 544 0 514 483 6 439 t 0 89 60 115 97 53 134 150 87 260 93 13 33 4 1 46 37 7 92 56

ERF069_MA0997.1_JASPAR_rc_shift9 (ERF069:MA0997.1:JASPAR_rc) 0.794 0.650 1.221 0.909 0.925 533 192 816 412 355 461.600
; assembly_17 versus ERF069_MA0997.1_JASPAR_rc (ERF069:MA0997.1:JASPAR_rc); m=67/237; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 461.6; ---------tggCGGCgs-- ; cor=0.794; Ncor=0.650; logoDP=1.221; NsEucl=0.909; NSW=0.925; rcor=533; rNcor=192; rlogoDP=816; rNsEucl=412; rNSW=355; rank_mean=461.600; match_rank= a 0 0 0 0 0 0 0 0 0 209 180 230 0 146 24 0 157 197 0 0 c 0 0 0 0 0 0 0 0 0 231 193 212 820 76 86 982 175 315 0 0 g 0 0 0 0 0 0 0 0 0 209 404 419 0 680 828 0 471 294 0 0 t 0 0 0 0 0 0 0 0 0 351 224 138 179 98 61 18 197 193 0 0

PK19363.1_M0004_1.02_CISBP_rc_shift9 (PK19363.1:M0004_1.02:CISBP_rc) 0.819 0.596 3.308 0.902 0.923 404 366 604 563 384 464.200
; assembly_17 versus PK19363.1_M0004_1.02_CISBP_rc (PK19363.1:M0004_1.02:CISBP_rc); m=68/237; ncol2=8; w=0; offset=0; strand=R; shift=9; score= 464.2; ---------yGgCGGCG--- ; cor=0.819; Ncor=0.596; logoDP=3.308; NsEucl=0.902; NSW=0.923; rcor=404; rNcor=366; rlogoDP=604; rNsEucl=563; rNSW=384; rank_mean=464.200; match_rank= a 0 0 0 0 0 0 0 0 0 14 6 18 0 0 0 1 5 0 0 0 c 0 0 0 0 0 0 0 0 0 30 1 14 99 1 11 95 8 0 0 0 g 0 0 0 0 0 0 0 0 0 7 77 63 1 97 87 1 72 0 0 0 t 0 0 0 0 0 0 0 0 0 49 16 5 0 2 2 3 15 0 0 0

ESE3_MA1236.1_JASPAR_shift3 (ESE3:MA1236.1:JASPAR) 0.803 0.465 5.232 0.916 0.923 485 840 342 274 382 464.600
; assembly_17 versus ESE3_MA1236.1_JASPAR (ESE3:MA1236.1:JASPAR); m=69/237; ncol2=19; w=-6; offset=-6; strand=D; shift=3; score= 464.6; ---cgghgghggCGGyGGmG ; cor=0.803; Ncor=0.465; logoDP=5.232; NsEucl=0.916; NSW=0.923; rcor=485; rNcor=840; rlogoDP=342; rNsEucl=274; rNSW=382; rank_mean=464.600; match_rank= a 0 0 0 148 96 113 186 146 114 178 90 146 12 0 1 29 0 15 270 46 c 0 0 0 219 48 65 185 26 30 153 7 17 543 0 3 400 0 45 211 9 g 0 0 0 100 362 368 64 307 331 28 374 385 0 596 592 0 587 524 19 501 t 0 0 0 129 90 50 161 117 121 237 125 48 41 0 0 167 9 12 96 40

LBD13_MA2021.1_JASPAR_rc_shift8 (LBD13:MA2021.1:JASPAR_rc) 0.761 0.644 3.596 0.912 0.915 713 210 572 347 481 464.600
; assembly_17 versus LBD13_MA2021.1_JASPAR_rc (LBD13:MA2021.1:JASPAR_rc); m=70/237; ncol2=13; w=-1; offset=-1; strand=R; shift=8; score= 464.6; --------dhkaCGGTGGag ; cor=0.761; Ncor=0.644; logoDP=3.596; NsEucl=0.912; NSW=0.915; rcor=713; rNcor=210; rlogoDP=572; rNsEucl=347; rNSW=481; rank_mean=464.600; match_rank= a 0 0 0 0 0 0 0 0 267 329 221 628 18 8 9 72 17 39 635 198 c 0 0 0 0 0 0 0 0 148 306 112 143 980 16 8 168 4 20 145 116 g 0 0 0 0 0 0 0 0 370 125 369 227 11 1021 1031 6 1018 979 44 494 t 0 0 0 0 0 0 0 0 270 295 353 57 46 10 7 809 16 17 231 247

Zm00001d005892_MA1819.1_JASPAR_rc_shift10 (Zm00001d005892:MA1819.1:JASPAR_rc) 0.797 0.613 3.507 0.907 0.914 516 297 579 449 488 465.800
; assembly_17 versus Zm00001d005892_MA1819.1_JASPAR_rc (Zm00001d005892:MA1819.1:JASPAR_rc); m=71/237; ncol2=12; w=0; offset=1; strand=R; shift=10; score= 465.8; ----------ggCGGCGGCG ; cor=0.797; Ncor=0.613; logoDP=3.507; NsEucl=0.907; NSW=0.914; rcor=516; rNcor=297; rlogoDP=579; rNsEucl=449; rNSW=488; rank_mean=465.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 3917 4805 990 748 1310 722 670 1200 765 872 c 0 0 0 0 0 0 0 0 0 0 6580 5911 24113 990 1696 25421 917 1794 25046 1309 g 0 0 0 0 0 0 0 0 0 0 13547 12889 1029 25022 23482 435 25251 23527 767 24431 t 0 0 0 0 0 0 0 0 0 0 3329 3768 1241 613 885 795 535 852 795 761

AT1G22985_M0007_1.02_CISBP_rc_shift9 (AT1G22985:M0007_1.02:CISBP_rc) 0.790 0.647 1.223 0.908 0.924 548 200 815 424 372 471.800
; assembly_17 versus AT1G22985_M0007_1.02_CISBP_rc (AT1G22985:M0007_1.02:CISBP_rc); m=72/237; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 471.8; ---------tggCGGCgs-- ; cor=0.790; Ncor=0.647; logoDP=1.223; NsEucl=0.908; NSW=0.924; rcor=548; rNcor=200; rlogoDP=815; rNsEucl=424; rNSW=372; rank_mean=471.800; match_rank= a 0 0 0 0 0 0 0 0 0 21 19 23 0 15 2 0 16 20 0 0 c 0 0 0 0 0 0 0 0 0 23 19 21 82 7 9 98 18 32 0 0 g 0 0 0 0 0 0 0 0 0 21 40 42 0 68 83 0 46 29 0 0 t 0 0 0 0 0 0 0 0 0 35 22 14 18 10 6 2 20 19 0 0

AT2G33710_MA1245.1_JASPAR_rc_shift9 (AT2G33710:MA1245.1:JASPAR_rc) 0.807 0.592 1.504 0.914 0.919 469 382 791 307 433 476.400
; assembly_17 versus AT2G33710_MA1245.1_JASPAR_rc (AT2G33710:MA1245.1:JASPAR_rc); m=73/237; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 476.4; ---------ykrCGGCGGmG ; cor=0.807; Ncor=0.592; logoDP=1.504; NsEucl=0.914; NSW=0.919; rcor=469; rNcor=382; rlogoDP=791; rNsEucl=307; rNSW=433; rank_mean=476.400; match_rank= a 0 0 0 0 0 0 0 0 0 123 67 192 1 0 0 7 0 12 160 32 c 0 0 0 0 0 0 0 0 0 156 17 11 551 0 11 551 3 112 350 13 g 0 0 0 0 0 0 0 0 0 11 350 372 0 583 572 0 573 456 8 475 t 0 0 0 0 0 0 0 0 0 293 149 8 31 0 0 25 7 3 65 63

ATERF6_M0027_1.02_CISBP_shift8 (ATERF6:M0027_1.02:CISBP) 0.802 0.601 5.074 0.898 0.907 496 343 374 628 563 480.800
; assembly_17 versus ATERF6_M0027_1.02_CISBP (ATERF6:M0027_1.02:CISBP); m=74/237; ncol2=10; w=-1; offset=-1; strand=D; shift=8; score= 480.8; --------mtGCCGGCgb-- ; cor=0.802; Ncor=0.601; logoDP=5.074; NsEucl=0.898; NSW=0.907; rcor=496; rNcor=343; rlogoDP=374; rNsEucl=628; rNSW=563; rank_mean=480.800; match_rank= a 0 0 0 0 0 0 0 0 29 8 0 0 0 0 0 0 16 17 0 0 c 0 0 0 0 0 0 0 0 35 22 0 100 100 0 9 100 16 28 0 0 g 0 0 0 0 0 0 0 0 18 16 100 0 0 100 91 0 53 26 0 0 t 0 0 0 0 0 0 0 0 18 54 0 0 0 0 0 0 15 29 0 0

ERF6_MA1006.1_JASPAR_shift8 (ERF6:MA1006.1:JASPAR) 0.801 0.601 5.078 0.898 0.907 498 345 370 631 564 481.600
; assembly_17 versus ERF6_MA1006.1_JASPAR (ERF6:MA1006.1:JASPAR); m=75/237; ncol2=10; w=-1; offset=-1; strand=D; shift=8; score= 481.6; --------mtGCCGGCgb-- ; cor=0.801; Ncor=0.601; logoDP=5.078; NsEucl=0.898; NSW=0.907; rcor=498; rNcor=345; rlogoDP=370; rNsEucl=631; rNSW=564; rank_mean=481.600; match_rank= a 0 0 0 0 0 0 0 0 291 78 0 0 0 0 0 0 159 172 0 0 c 0 0 0 0 0 0 0 0 352 221 0 1000 1000 0 88 1000 156 278 0 0 g 0 0 0 0 0 0 0 0 179 166 1000 0 0 1000 912 0 530 257 0 0 t 0 0 0 0 0 0 0 0 179 535 0 0 0 0 0 0 155 294 0 0

ERF1_M0025_1.02_CISBP_rc_shift11 (ERF1:M0025_1.02:CISBP_rc) 0.812 0.609 4.047 0.899 0.909 442 310 511 611 540 482.800
; assembly_17 versus ERF1_M0025_1.02_CISBP_rc (ERF1:M0025_1.02:CISBP_rc); m=76/237; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 482.8; -----------ryGGCGGCk ; cor=0.812; Ncor=0.609; logoDP=4.047; NsEucl=0.899; NSW=0.909; rcor=442; rNcor=310; rlogoDP=511; rNsEucl=611; rNSW=540; rank_mean=482.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 35 7 0 0 0 0 0 0 10 c 0 0 0 0 0 0 0 0 0 0 0 24 50 0 0 100 0 0 100 10 g 0 0 0 0 0 0 0 0 0 0 0 26 7 100 100 0 100 100 0 50 t 0 0 0 0 0 0 0 0 0 0 0 15 36 0 0 0 0 0 0 30

ERF9_MA1257.1_JASPAR_shift0 (ERF9:MA1257.1:JASPAR) 0.811 0.425 5.110 0.917 0.924 453 981 361 265 370 486.000
; assembly_17 versus ERF9_MA1257.1_JASPAR (ERF9:MA1257.1:JASPAR); m=77/237; ncol2=21; w=-9; offset=-9; strand=D; shift=0; score= 486; yggcggmkryGrCGGCGGmG ; cor=0.811; Ncor=0.425; logoDP=5.110; NsEucl=0.917; NSW=0.924; rcor=453; rNcor=981; rlogoDP=361; rNsEucl=265; rNSW=370; rank_mean=486.000; match_rank= a 90 89 109 106 83 106 143 104 161 111 73 167 26 0 10 16 4 31 204 52 c 246 24 50 265 32 63 239 32 37 167 6 15 496 0 0 493 0 34 253 8 g 79 353 336 69 343 333 39 269 270 17 383 360 0 551 544 0 514 483 6 439 t 140 89 60 115 97 53 134 150 87 260 93 13 33 4 1 46 37 7 92 56

ERF8.DAP_M0044_AthalianaCistrome_rc_shift10 (ERF8.DAP:M0044:AthalianaCistrome_rc) 0.832 0.520 1.129 0.913 0.925 343 640 831 316 354 496.800
; assembly_17 versus ERF8.DAP_M0044_AthalianaCistrome_rc (ERF8.DAP:M0044:AthalianaCistrome_rc); m=78/237; ncol2=15; w=0; offset=1; strand=R; shift=10; score= 496.8; ----------krCGGCGGmG ; cor=0.832; Ncor=0.520; logoDP=1.129; NsEucl=0.913; NSW=0.925; rcor=343; rNcor=640; rlogoDP=831; rNsEucl=316; rNSW=354; rank_mean=496.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 127 211 0 0 34 5 0 2 156 35 c 0 0 0 0 0 0 0 0 0 0 39 33 508 0 0 570 1 32 349 7 g 0 0 0 0 0 0 0 0 0 0 274 314 0 587 555 0 587 545 0 492 t 0 0 0 0 0 0 0 0 0 0 149 31 81 2 0 14 1 10 84 55

At2g33710.ampDAP_M0021_AthalianaCistrome_rc_shift4 (At2g33710.ampDAP:M0021:AthalianaCistrome_rc) 0.809 0.495 2.305 0.918 0.927 460 731 730 246 328 499.000
; assembly_17 versus At2g33710.ampDAP_M0021_AthalianaCistrome_rc (At2g33710.ampDAP:M0021:AthalianaCistrome_rc); m=79/237; ncol2=18; w=-5; offset=-5; strand=R; shift=4; score= 499; ----krmdrwkrCGGCGGCG ; cor=0.809; Ncor=0.495; logoDP=2.305; NsEucl=0.918; NSW=0.927; rcor=460; rNcor=731; rlogoDP=730; rNsEucl=246; rNSW=328; rank_mean=499.000; match_rank= a 0 0 0 0 131 166 205 169 219 177 146 262 22 0 24 0 0 14 111 25 c 0 0 0 0 65 102 204 55 42 129 25 34 470 1 6 596 2 109 451 29 g 0 0 0 0 249 246 61 206 221 18 241 265 3 574 566 0 580 477 10 463 t 0 0 0 0 155 86 130 170 118 276 188 39 105 25 4 4 18 0 28 83

ERF8.ampDAP_M0046_AthalianaCistrome_shift5 (ERF8.ampDAP:M0046:AthalianaCistrome) 0.783 0.479 5.455 0.912 0.915 592 788 303 346 480 501.800
; assembly_17 versus ERF8.ampDAP_M0046_AthalianaCistrome (ERF8.ampDAP:M0046:AthalianaCistrome); m=80/237; ncol2=18; w=-4; offset=-4; strand=D; shift=5; score= 501.8; -----rwwwyGGCGGCGghg ; cor=0.783; Ncor=0.479; logoDP=5.455; NsEucl=0.912; NSW=0.915; rcor=592; rNcor=788; rlogoDP=303; rNsEucl=346; rNSW=480; rank_mean=501.800; match_rank= a 0 0 0 0 0 201 256 257 292 68 19 146 0 0 0 1 3 73 212 144 c 0 0 0 0 0 90 104 34 30 160 0 3 588 0 0 582 0 135 165 37 g 0 0 0 0 0 180 66 102 110 0 499 414 0 585 588 0 517 319 60 279 t 0 0 0 0 0 117 162 195 156 360 70 25 0 3 0 5 68 61 151 128

ERF11.ampDAP_M0072_AthalianaCistrome_shift4 (ERF11.ampDAP:M0072:AthalianaCistrome) 0.793 0.436 5.600 0.913 0.917 536 937 277 323 451 504.800
; assembly_17 versus ERF11.ampDAP_M0072_AthalianaCistrome (ERF11.ampDAP:M0072:AthalianaCistrome); m=81/237; ncol2=20; w=-5; offset=-5; strand=D; shift=4; score= 504.8; ----rrwwayGrCGGCGghg ; cor=0.793; Ncor=0.436; logoDP=5.600; NsEucl=0.913; NSW=0.917; rcor=536; rNcor=937; rlogoDP=277; rNsEucl=323; rNSW=451; rank_mean=504.800; match_rank= a 0 0 0 0 156 187 209 234 281 75 30 158 0 0 0 0 5 54 171 106 c 0 0 0 0 76 74 124 44 36 147 0 3 569 0 0 568 0 123 193 32 g 0 0 0 0 216 209 79 123 138 0 466 383 0 568 569 0 508 349 53 326 t 0 0 0 0 121 99 157 168 114 347 73 25 0 1 0 1 56 43 152 105

ERF11_MA1001.1_JASPAR_rc_shift8 (ERF11:MA1001.1:JASPAR_rc) 0.789 0.592 1.415 0.908 0.923 558 379 795 429 380 508.200
; assembly_17 versus ERF11_MA1001.1_JASPAR_rc (ERF11:MA1001.1:JASPAR_rc); m=82/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 508.2; --------wtkrCGGCgs-- ; cor=0.789; Ncor=0.592; logoDP=1.415; NsEucl=0.908; NSW=0.923; rcor=558; rNcor=379; rlogoDP=795; rNsEucl=429; rNSW=380; rank_mean=508.200; match_rank= a 0 0 0 0 0 0 0 0 324 233 175 273 31 99 85 4 169 165 0 0 c 0 0 0 0 0 0 0 0 204 181 77 154 828 51 55 887 123 316 0 0 g 0 0 0 0 0 0 0 0 196 162 490 383 10 704 835 0 494 313 0 0 t 0 0 0 0 0 0 0 0 276 424 258 190 131 145 25 109 213 206 0 0

ESE1_MA1264.1_JASPAR_shift9 (ESE1:MA1264.1:JASPAR) 0.767 0.562 5.292 0.907 0.905 686 498 333 453 593 512.600
; assembly_17 versus ESE1_MA1264.1_JASPAR (ESE1:MA1264.1:JASPAR); m=83/237; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 512.6; ---------ygryGGCGGCG ; cor=0.767; Ncor=0.562; logoDP=5.292; NsEucl=0.907; NSW=0.905; rcor=686; rNcor=498; rlogoDP=333; rNsEucl=453; rNSW=593; rank_mean=512.600; match_rank= a 0 0 0 0 0 0 0 0 0 124 137 189 78 4 55 3 0 0 13 5 c 0 0 0 0 0 0 0 0 0 213 59 45 335 0 2 570 0 4 525 6 g 0 0 0 0 0 0 0 0 0 47 277 327 2 587 534 0 591 587 0 503 t 0 0 0 0 0 0 0 0 0 207 118 30 176 0 0 18 0 0 53 77

ERF11_M0009_1.02_CISBP_rc_shift8 (ERF11:M0009_1.02:CISBP_rc) 0.786 0.590 1.409 0.907 0.923 574 391 796 443 385 517.800
; assembly_17 versus ERF11_M0009_1.02_CISBP_rc (ERF11:M0009_1.02:CISBP_rc); m=84/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 517.8; --------wtkrCGGCgs-- ; cor=0.786; Ncor=0.590; logoDP=1.409; NsEucl=0.907; NSW=0.923; rcor=574; rNcor=391; rlogoDP=796; rNsEucl=443; rNSW=385; rank_mean=517.800; match_rank= a 0 0 0 0 0 0 0 0 32 23 17 27 3 10 9 0 17 17 0 0 c 0 0 0 0 0 0 0 0 20 18 8 15 83 5 6 89 13 31 0 0 g 0 0 0 0 0 0 0 0 20 17 49 38 1 70 83 0 49 31 0 0 t 0 0 0 0 0 0 0 0 28 42 26 20 13 15 2 11 21 21 0 0

GRF4_EEAD0016_EEADannot_rc_shift9 (GRF4:EEAD0016:EEADannot_rc) 0.758 0.695 2.866 0.906 0.902 723 113 662 474 621 518.600
; assembly_17 versus GRF4_EEAD0016_EEADannot_rc (GRF4:EEAD0016:EEADannot_rc); m=85/237; ncol2=12; w=0; offset=0; strand=R; shift=9; score= 518.6; ---------cgGCGGCGGCg ; cor=0.758; Ncor=0.695; logoDP=2.866; NsEucl=0.906; NSW=0.902; rcor=723; rNcor=113; rlogoDP=662; rNsEucl=474; rNSW=621; rank_mean=518.600; match_rank= a 0 0 0 0 0 0 0 0 0 111 113 32 33 28 17 19 33 24 24 111 c 0 0 0 0 0 0 0 0 0 441 159 38 722 32 21 741 28 35 704 137 g 0 0 0 0 0 0 0 0 0 147 447 697 15 715 738 13 707 723 32 463 t 0 0 0 0 0 0 0 0 0 97 77 29 26 21 20 23 28 14 36 85

ERF096_MA0998.2_JASPAR_rc_shift13 (ERF096:MA0998.2:JASPAR_rc) 0.867 0.473 2.675 0.897 0.936 197 818 697 657 225 518.800
; assembly_17 versus ERF096_MA0998.2_JASPAR_rc (ERF096:MA0998.2:JASPAR_rc); m=86/237; ncol2=6; w=0; offset=4; strand=R; shift=13; score= 518.8; -------------GgCGGC- ; cor=0.867; Ncor=0.473; logoDP=2.675; NsEucl=0.897; NSW=0.936; rcor=197; rNcor=818; rlogoDP=697; rNsEucl=657; rNSW=225; rank_mean=518.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 38 149 19 32 27 13 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 24 131 928 21 36 939 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 903 591 10 850 905 13 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 35 129 43 97 32 34 0

CRF4.ampDAP_M0079_AthalianaCistrome_shift9 (CRF4.ampDAP:M0079:AthalianaCistrome) 0.767 0.563 5.409 0.905 0.900 681 491 309 498 645 524.800
; assembly_17 versus CRF4.ampDAP_M0079_AthalianaCistrome (CRF4.ampDAP:M0079:AthalianaCistrome); m=87/237; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 524.8; ---------ygRCGGCGGCG ; cor=0.767; Ncor=0.563; logoDP=5.409; NsEucl=0.905; NSW=0.900; rcor=681; rNcor=491; rlogoDP=309; rNsEucl=498; rNSW=645; rank_mean=524.800; match_rank= a 0 0 0 0 0 0 0 0 0 138 102 158 14 8 10 4 0 1 100 17 c 0 0 0 0 0 0 0 0 0 192 36 1 447 0 4 561 0 33 460 9 g 0 0 0 0 0 0 0 0 0 19 382 420 0 585 586 0 600 566 0 530 t 0 0 0 0 0 0 0 0 0 251 80 21 139 7 0 35 0 0 40 44

ERF3_M0011_1.02_CISBP_rc_shift9 (ERF3:M0011_1.02:CISBP_rc) 0.809 0.588 3.810 0.894 0.911 463 396 543 709 520 526.200
; assembly_17 versus ERF3_M0011_1.02_CISBP_rc (ERF3:M0011_1.02:CISBP_rc); m=88/237; ncol2=8; w=0; offset=0; strand=R; shift=9; score= 526.2; ---------yGgCGGCG--- ; cor=0.809; Ncor=0.588; logoDP=3.810; NsEucl=0.894; NSW=0.911; rcor=463; rNcor=396; rlogoDP=543; rNsEucl=709; rNSW=520; rank_mean=526.200; match_rank= a 0 0 0 0 0 0 0 0 0 12 2 11 0 0 0 0 8 0 0 0 c 0 0 0 0 0 0 0 0 0 28 0 19 99 1 11 99 8 0 0 0 g 0 0 0 0 0 0 0 0 0 2 90 64 0 99 89 0 76 0 0 0 t 0 0 0 0 0 0 0 0 0 58 8 6 1 0 0 1 8 0 0 0

Rap2.6L_M0036_1.02_CISBP_rc_shift8 (Rap2.6L:M0036_1.02:CISBP_rc) 0.784 0.588 1.240 0.907 0.922 583 394 811 456 398 528.400
; assembly_17 versus Rap2.6L_M0036_1.02_CISBP_rc (Rap2.6L:M0036_1.02:CISBP_rc); m=89/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 528.4; --------wtkrCGGCks-- ; cor=0.784; Ncor=0.588; logoDP=1.240; NsEucl=0.907; NSW=0.922; rcor=583; rNcor=394; rlogoDP=811; rNsEucl=456; rNSW=398; rank_mean=528.400; match_rank= a 0 0 0 0 0 0 0 0 31 21 17 29 6 5 5 1 13 20 0 0 c 0 0 0 0 0 0 0 0 19 19 9 12 75 5 14 89 17 27 0 0 g 0 0 0 0 0 0 0 0 21 21 46 41 8 80 77 3 44 35 0 0 t 0 0 0 0 0 0 0 0 29 39 28 18 11 10 4 7 26 18 0 0

CRF3_M0041_1.02_CISBP_rc_shift9 (CRF3:M0041_1.02:CISBP_rc) 0.775 0.634 1.000 0.905 0.919 646 229 854 489 434 530.400
; assembly_17 versus CRF3_M0041_1.02_CISBP_rc (CRF3:M0041_1.02:CISBP_rc); m=90/237; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 530.4; ---------tggcGGCgs-- ; cor=0.775; Ncor=0.634; logoDP=1.000; NsEucl=0.905; NSW=0.919; rcor=646; rNcor=229; rlogoDP=854; rNsEucl=489; rNSW=434; rank_mean=530.400; match_rank= a 0 0 0 0 0 0 0 0 0 21 19 24 11 7 5 0 14 20 0 0 c 0 0 0 0 0 0 0 0 0 21 13 14 62 6 5 94 16 30 0 0 g 0 0 0 0 0 0 0 0 0 24 46 42 10 78 88 0 48 31 0 0 t 0 0 0 0 0 0 0 0 0 34 22 20 17 9 2 6 22 19 0 0

ERF3_MA1005.1_JASPAR_rc_shift9 (ERF3:MA1005.1:JASPAR_rc) 0.806 0.586 3.776 0.894 0.910 476 406 550 710 525 533.400
; assembly_17 versus ERF3_MA1005.1_JASPAR_rc (ERF3:MA1005.1:JASPAR_rc); m=91/237; ncol2=8; w=0; offset=0; strand=R; shift=9; score= 533.4; ---------yGgCGGCG--- ; cor=0.806; Ncor=0.586; logoDP=3.776; NsEucl=0.894; NSW=0.910; rcor=476; rNcor=406; rlogoDP=550; rNsEucl=710; rNSW=525; rank_mean=533.400; match_rank= a 0 0 0 0 0 0 0 0 0 116 16 114 0 0 0 0 80 0 0 0 c 0 0 0 0 0 0 0 0 0 279 0 186 985 14 114 985 80 0 0 0 g 0 0 0 0 0 0 0 0 0 23 904 643 0 985 885 0 760 0 0 0 t 0 0 0 0 0 0 0 0 0 581 79 57 14 0 0 14 80 0 0 0

ERF024Ved_EEAD0158_EEADannot_shift9 (ERF024Ved:EEAD0158:EEADannot) 0.741 0.544 4.853 0.910 0.911 806 558 413 387 511 535.000
; assembly_17 versus ERF024Ved_EEAD0158_EEADannot (ERF024Ved:EEAD0158:EEADannot); m=92/237; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 535; ---------crryGkCGGYr ; cor=0.741; Ncor=0.544; logoDP=4.853; NsEucl=0.910; NSW=0.911; rcor=806; rNcor=558; rlogoDP=413; rNsEucl=387; rNSW=511; rank_mean=535.000; match_rank= a 0 0 0 0 0 0 0 0 0 24 26 28 2 0 22 1 0 5 3 28 c 0 0 0 0 0 0 0 0 0 39 7 10 56 0 0 99 0 0 68 8 g 0 0 0 0 0 0 0 0 0 17 54 41 0 100 36 0 100 95 2 58 t 0 0 0 0 0 0 0 0 0 20 13 21 42 0 42 0 0 0 27 6

ERF8_MA0994.2_JASPAR_shift6 (ERF8:MA0994.2:JASPAR) 0.785 0.479 5.297 0.908 0.907 581 785 331 422 561 536.000
; assembly_17 versus ERF8_MA0994.2_JASPAR (ERF8:MA0994.2:JASPAR); m=93/237; ncol2=18; w=-3; offset=-3; strand=D; shift=6; score= 536; ------hrrtgrCGGCGGCG ; cor=0.785; Ncor=0.479; logoDP=5.297; NsEucl=0.908; NSW=0.907; rcor=581; rNcor=785; rlogoDP=331; rNsEucl=422; rNSW=561; rank_mean=536.000; match_rank= a 0 0 0 0 0 0 195 198 249 116 103 426 32 3 16 11 6 16 108 21 c 0 0 0 0 0 0 222 79 91 180 50 29 649 3 9 701 2 46 537 9 g 0 0 0 0 0 0 125 286 273 33 491 252 5 728 714 0 728 667 11 674 t 0 0 0 0 0 0 201 180 130 414 99 36 57 9 4 31 7 14 87 39

ERF091_MA1228.2_JASPAR_shift8 (ERF091:MA1228.2:JASPAR) 0.747 0.632 5.345 0.900 0.889 783 232 322 605 767 541.800
; assembly_17 versus ERF091_MA1228.2_JASPAR (ERF091:MA1228.2:JASPAR); m=94/237; ncol2=13; w=-1; offset=-1; strand=D; shift=8; score= 541.8; --------ryGGCGGCGGmg ; cor=0.747; Ncor=0.632; logoDP=5.345; NsEucl=0.900; NSW=0.889; rcor=783; rNcor=232; rlogoDP=322; rNsEucl=605; rNSW=767; rank_mean=541.800; match_rank= a 0 0 0 0 0 0 0 0 187 78 0 34 0 0 0 13 6 85 179 91 c 0 0 0 0 0 0 0 0 52 289 0 0 526 0 0 505 7 69 205 25 g 0 0 0 0 0 0 0 0 263 0 534 503 0 537 537 0 472 378 32 337 t 0 0 0 0 0 0 0 0 35 170 3 0 11 0 0 19 52 5 121 84

ERF4.ampDAP_M0033_AthalianaCistrome_shift4 (ERF4.ampDAP:M0033:AthalianaCistrome) 0.783 0.430 5.725 0.910 0.911 594 954 264 388 512 542.400
; assembly_17 versus ERF4.ampDAP_M0033_AthalianaCistrome (ERF4.ampDAP:M0033:AthalianaCistrome); m=95/237; ncol2=20; w=-5; offset=-5; strand=D; shift=4; score= 542.4; ----rrwwayGRCGGCGgmg ; cor=0.783; Ncor=0.430; logoDP=5.725; NsEucl=0.910; NSW=0.911; rcor=594; rNcor=954; rlogoDP=264; rNsEucl=388; rNSW=512; rank_mean=542.400; match_rank= a 0 0 0 0 149 194 242 246 299 71 20 156 1 0 1 0 0 45 228 135 c 0 0 0 0 92 88 111 28 24 153 1 0 581 0 0 582 0 145 153 39 g 0 0 0 0 233 203 65 110 122 4 516 406 0 582 581 0 538 342 76 309 t 0 0 0 0 108 97 164 198 137 354 45 20 0 0 0 0 44 50 125 99

ERF4_MA0992.2_JASPAR_rc_shift7 (ERF4:MA0992.2:JASPAR_rc) 0.781 0.601 3.755 0.901 0.902 613 349 553 574 624 542.600
; assembly_17 versus ERF4_MA0992.2_JASPAR_rc (ERF4:MA0992.2:JASPAR_rc); m=96/237; ncol2=12; w=-2; offset=-2; strand=R; shift=7; score= 542.6; -------drTGrCGGCGgm- ; cor=0.781; Ncor=0.601; logoDP=3.755; NsEucl=0.901; NSW=0.902; rcor=613; rNcor=349; rlogoDP=553; rNsEucl=574; rNSW=624; rank_mean=542.600; match_rank= a 0 0 0 0 0 0 0 305 363 86 56 627 8 1 17 19 5 126 319 0 c 0 0 0 0 0 0 0 113 101 91 25 13 1006 2 9 979 2 165 368 0 g 0 0 0 0 0 0 0 287 306 19 900 349 0 1015 992 1 1005 644 109 0 t 0 0 0 0 0 0 0 318 253 827 42 34 9 5 5 24 11 88 227 0

ERF4.DAP_M0047_AthalianaCistrome_rc_shift6 (ERF4.DAP:M0047:AthalianaCistrome_rc) 0.787 0.577 2.832 0.907 0.905 568 433 671 454 594 544.000
; assembly_17 versus ERF4.DAP_M0047_AthalianaCistrome_rc (ERF4.DAP:M0047:AthalianaCistrome_rc); m=97/237; ncol2=15; w=-3; offset=-3; strand=R; shift=6; score= 544; ------wdryGGCGGCGGmG ; cor=0.787; Ncor=0.577; logoDP=2.832; NsEucl=0.907; NSW=0.905; rcor=568; rNcor=433; rlogoDP=671; rNsEucl=454; rNSW=594; rank_mean=544.000; match_rank= a 0 0 0 0 0 0 231 216 260 71 12 128 0 1 0 3 2 21 237 90 c 0 0 0 0 0 0 123 26 25 170 2 0 596 0 1 591 0 103 195 21 g 0 0 0 0 0 0 71 153 182 3 531 463 0 595 596 0 583 454 53 407 t 0 0 0 0 0 0 172 202 130 353 52 6 1 1 0 3 12 19 112 79

ATERF-8_M0012_1.02_CISBP_rc_shift7 (ATERF-8:M0012_1.02:CISBP_rc) 0.827 0.509 0.197 0.910 0.936 357 687 1061 383 234 544.400
; assembly_17 versus ATERF-8_M0012_1.02_CISBP_rc (ATERF-8:M0012_1.02:CISBP_rc); m=98/237; ncol2=10; w=-2; offset=-2; strand=R; shift=7; score= 544.4; -------wwtggCGGCg--- ; cor=0.827; Ncor=0.509; logoDP=0.197; NsEucl=0.910; NSW=0.936; rcor=357; rNcor=687; rlogoDP=1061; rNsEucl=383; rNSW=234; rank_mean=544.400; match_rank= a 0 0 0 0 0 0 0 31 34 19 14 24 3 5 2 0 13 0 0 0 c 0 0 0 0 0 0 0 19 18 18 6 15 85 3 6 96 10 0 0 0 g 0 0 0 0 0 0 0 21 21 18 60 46 5 81 91 0 57 0 0 0 t 0 0 0 0 0 0 0 29 27 45 20 15 7 11 1 4 20 0 0 0

ERF8_MA0994.1_JASPAR_rc_shift7 (ERF8:MA0994.1:JASPAR_rc) 0.827 0.509 0.192 0.910 0.936 358 688 1065 382 233 545.200
; assembly_17 versus ERF8_MA0994.1_JASPAR_rc (ERF8:MA0994.1:JASPAR_rc); m=99/237; ncol2=10; w=-2; offset=-2; strand=R; shift=7; score= 545.2; -------wwtggCGGCg--- ; cor=0.827; Ncor=0.509; logoDP=0.192; NsEucl=0.910; NSW=0.936; rcor=358; rNcor=688; rlogoDP=1065; rNsEucl=382; rNSW=233; rank_mean=545.200; match_rank= a 0 0 0 0 0 0 0 311 336 192 139 243 31 48 19 3 129 0 0 0 c 0 0 0 0 0 0 0 192 185 184 58 151 841 31 64 959 97 0 0 0 g 0 0 0 0 0 0 0 206 206 175 605 452 53 807 908 0 572 0 0 0 t 0 0 0 0 0 0 0 290 273 449 197 154 75 114 9 38 202 0 0 0

ERF11_MA1001.2_JASPAR_rc_shift7 (ERF11:MA1001.2:JASPAR_rc) 0.776 0.597 3.616 0.901 0.903 638 360 569 568 615 550.000
; assembly_17 versus ERF11_MA1001.2_JASPAR_rc (ERF11:MA1001.2:JASPAR_rc); m=100/237; ncol2=12; w=-2; offset=-2; strand=R; shift=7; score= 550; -------ddTGRCGGCGgm- ; cor=0.776; Ncor=0.597; logoDP=3.616; NsEucl=0.901; NSW=0.903; rcor=638; rNcor=360; rlogoDP=569; rNsEucl=568; rNSW=615; rank_mean=550.000; match_rank= a 0 0 0 0 0 0 0 356 414 120 96 894 12 2 19 31 10 198 377 0 c 0 0 0 0 0 0 0 160 136 134 40 22 1252 2 23 1218 8 203 455 0 g 0 0 0 0 0 0 0 391 407 28 1081 331 0 1269 1230 1 1243 728 136 0 t 0 0 0 0 0 0 0 373 323 998 63 33 16 7 8 30 19 151 312 0

ERF024PS_EEAD0159_EEADannot_rc_shift9 (ERF024PS:EEAD0159:EEADannot_rc) 0.758 0.556 1.964 0.913 0.917 725 517 747 333 457 555.800
; assembly_17 versus ERF024PS_EEAD0159_EEADannot_rc (ERF024PS:EEAD0159:EEADannot_rc); m=101/237; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 555.8; ---------mrryGkCGGCR ; cor=0.758; Ncor=0.556; logoDP=1.964; NsEucl=0.913; NSW=0.917; rcor=725; rNcor=517; rlogoDP=747; rNsEucl=333; rNSW=457; rank_mean=555.800; match_rank= a 0 0 0 0 0 0 0 0 0 25 31 33 4 0 24 3 0 7 10 26 c 0 0 0 0 0 0 0 0 0 35 8 10 60 0 0 97 0 0 68 3 g 0 0 0 0 0 0 0 0 0 23 53 41 0 100 44 0 100 93 3 68 t 0 0 0 0 0 0 0 0 0 17 8 16 36 0 32 0 0 0 19 3

ERF008_MA0979.1_JASPAR_rc_shift12 (ERF008:MA0979.1:JASPAR_rc) 0.789 0.574 2.466 0.899 0.918 559 448 720 622 444 558.600
; assembly_17 versus ERF008_MA0979.1_JASPAR_rc (ERF008:MA0979.1:JASPAR_rc); m=102/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 558.6; ------------sGkCGGyG ; cor=0.789; Ncor=0.574; logoDP=2.466; NsEucl=0.899; NSW=0.918; rcor=559; rNcor=448; rlogoDP=720; rNsEucl=622; rNSW=444; rank_mean=558.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 154 34 101 26 8 26 17 41 c 0 0 0 0 0 0 0 0 0 0 0 0 329 68 56 865 19 58 634 24 g 0 0 0 0 0 0 0 0 0 0 0 0 417 828 524 44 934 889 15 787 t 0 0 0 0 0 0 0 0 0 0 0 0 100 70 320 66 39 27 335 148

LBD18.DAP_M0470_AthalianaCistrome_rc_shift2 (LBD18.DAP:M0470:AthalianaCistrome_rc) 0.788 0.456 0.336 0.924 0.936 563 866 982 174 219 560.800
; assembly_17 versus LBD18.DAP_M0470_AthalianaCistrome_rc (LBD18.DAP:M0470:AthalianaCistrome_rc); m=103/237; ncol2=19; w=-7; offset=-7; strand=R; shift=2; score= 560.8; --sCgGAAAwtccGsmgrar ; cor=0.788; Ncor=0.456; logoDP=0.336; NsEucl=0.924; NSW=0.936; rcor=563; rNcor=866; rlogoDP=982; rNsEucl=174; rNSW=219; rank_mean=560.800; match_rank= a 0 0 24 29 69 41 414 416 471 386 102 138 93 0 10 256 148 160 246 236 c 0 0 352 571 47 65 6 2 7 49 131 297 365 1 170 232 16 87 130 60 g 0 0 204 0 407 409 117 127 76 11 74 103 38 580 403 41 346 248 79 171 t 0 0 20 0 77 85 63 55 46 154 293 62 104 19 17 71 90 105 145 133

ERF105_MA1000.2_JASPAR_shift8 (ERF105:MA1000.2:JASPAR) 0.753 0.552 5.545 0.902 0.895 756 527 285 548 693 561.800
; assembly_17 versus ERF105_MA1000.2_JASPAR (ERF105:MA1000.2:JASPAR); m=104/237; ncol2=15; w=-1; offset=-1; strand=D; shift=8; score= 561.8; --------ghrryGGCGGCG ; cor=0.753; Ncor=0.552; logoDP=5.545; NsEucl=0.902; NSW=0.895; rcor=756; rNcor=527; rlogoDP=285; rNsEucl=548; rNSW=693; rank_mean=561.800; match_rank= a 0 0 0 0 0 0 0 0 144 149 168 189 50 0 21 1 0 0 21 1 c 0 0 0 0 0 0 0 0 57 181 44 37 307 0 0 569 0 1 544 0 g 0 0 0 0 0 0 0 0 278 36 257 312 0 586 565 0 586 585 0 523 t 0 0 0 0 0 0 0 0 107 220 117 48 229 0 0 16 0 0 21 62

ERF115_MA2013.1_JASPAR_rc_shift8 (ERF115:MA2013.1:JASPAR_rc) 0.795 0.583 0.679 0.909 0.908 524 416 907 417 550 562.800
; assembly_17 versus ERF115_MA2013.1_JASPAR_rc (ERF115:MA2013.1:JASPAR_rc); m=105/237; ncol2=15; w=-1; offset=-1; strand=R; shift=8; score= 562.8; --------gykGCGGCGGCG ; cor=0.795; Ncor=0.583; logoDP=0.679; NsEucl=0.909; NSW=0.908; rcor=524; rNcor=416; rlogoDP=907; rNsEucl=417; rNSW=550; rank_mean=562.800; match_rank= a 0 0 0 0 0 0 0 0 221 166 97 121 18 12 24 10 10 18 126 32 c 0 0 0 0 0 0 0 0 92 375 42 55 840 0 12 880 6 35 715 15 g 0 0 0 0 0 0 0 0 418 71 286 698 3 880 865 1 866 839 8 815 t 0 0 0 0 0 0 0 0 174 293 480 31 44 13 4 14 23 13 56 43

ERF5_MA1225.1_JASPAR_rc_shift9 (ERF5:MA1225.1:JASPAR_rc) 0.777 0.570 1.666 0.909 0.908 633 464 772 411 546 565.200
; assembly_17 versus ERF5_MA1225.1_JASPAR_rc (ERF5:MA1225.1:JASPAR_rc); m=106/237; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 565.2; ---------yGGCGGCGGcG ; cor=0.777; Ncor=0.570; logoDP=1.666; NsEucl=0.909; NSW=0.908; rcor=633; rNcor=464; rlogoDP=772; rNsEucl=411; rNSW=546; rank_mean=565.200; match_rank= a 0 0 0 0 0 0 0 0 0 106 72 142 42 0 19 9 0 16 129 23 c 0 0 0 0 0 0 0 0 0 219 29 17 465 0 20 503 0 32 370 5 g 0 0 0 0 0 0 0 0 0 17 424 418 0 576 537 0 564 529 0 494 t 0 0 0 0 0 0 0 0 0 238 55 3 73 4 4 68 16 3 81 58

ERF095_MA1264.2_JASPAR_shift8 (ERF095:MA1264.2:JASPAR) 0.740 0.627 5.047 0.900 0.889 812 260 381 607 770 566.000
; assembly_17 versus ERF095_MA1264.2_JASPAR (ERF095:MA1264.2:JASPAR); m=107/237; ncol2=13; w=-1; offset=-1; strand=D; shift=8; score= 566; --------ryGGCGGCGGmG ; cor=0.740; Ncor=0.627; logoDP=5.047; NsEucl=0.900; NSW=0.889; rcor=812; rNcor=260; rlogoDP=381; rNsEucl=607; rNSW=770; rank_mean=566.000; match_rank= a 0 0 0 0 0 0 0 0 189 78 4 55 3 0 0 13 5 76 191 90 c 0 0 0 0 0 0 0 0 45 335 0 2 570 0 4 525 6 85 231 25 g 0 0 0 0 0 0 0 0 327 2 587 534 0 591 587 0 503 423 43 402 t 0 0 0 0 0 0 0 0 30 176 0 0 18 0 0 53 77 7 126 74

At3g14180.DAP_M0777_AthalianaCistrome_rc_shift7 (At3g14180.DAP:M0777:AthalianaCistrome_rc) 0.811 0.561 2.265 0.899 0.909 452 502 732 610 537 566.600
; assembly_17 versus At3g14180.DAP_M0777_AthalianaCistrome_rc (At3g14180.DAP:M0777:AthalianaCistrome_rc); m=108/237; ncol2=11; w=-2; offset=-2; strand=R; shift=7; score= 566.6; -------wTyTCCGGyGA-- ; cor=0.811; Ncor=0.561; logoDP=2.265; NsEucl=0.899; NSW=0.909; rcor=452; rNcor=502; rlogoDP=732; rNsEucl=610; rNSW=537; rank_mean=566.600; match_rank= a 0 0 0 0 0 0 0 168 101 15 25 0 0 0 30 0 62 451 0 0 c 0 0 0 0 0 0 0 37 47 273 8 598 598 0 1 404 23 34 0 0 g 0 0 0 0 0 0 0 90 32 6 32 0 0 598 556 0 490 80 0 0 t 0 0 0 0 0 0 0 303 418 304 533 0 0 0 11 194 23 33 0 0

WIN1_MA1804.2_JASPAR_rc_shift14 (WIN1:MA1804.2:JASPAR_rc) 0.843 0.460 0.283 0.903 0.944 289 855 1013 527 160 568.800
; assembly_17 versus WIN1_MA1804.2_JASPAR_rc (WIN1:MA1804.2:JASPAR_rc); m=109/237; ncol2=6; w=0; offset=5; strand=R; shift=14; score= 568.8; --------------gCGGyG ; cor=0.843; Ncor=0.460; logoDP=0.283; NsEucl=0.903; NSW=0.944; rcor=289; rNcor=855; rlogoDP=1013; rNsEucl=527; rNSW=160; rank_mean=568.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 78 77 43 17 1 10 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 79 712 1 187 615 133 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 679 9 956 795 1 720 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 164 202 1 1 384 137

WIN1_MA1804.1_JASPAR_rc_shift8 (WIN1:MA1804.1:JASPAR_rc) 0.768 0.576 1.869 0.904 0.917 680 440 759 512 453 568.800
; assembly_17 versus WIN1_MA1804.1_JASPAR_rc (WIN1:MA1804.1:JASPAR_rc); m=110/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 568.8; --------aykgCGGyGs-- ; cor=0.768; Ncor=0.576; logoDP=1.869; NsEucl=0.904; NSW=0.917; rcor=680; rNcor=440; rlogoDP=759; rNsEucl=512; rNSW=453; rank_mean=568.800; match_rank= a 0 0 0 0 0 0 0 0 406 158 145 78 77 43 17 0.58 9.58 94 0 0 c 0 0 0 0 0 0 0 0 172 426 155 79 712 0.69 187 615 133 267 0 0 g 0 0 0 0 0 0 0 0 239 163 352 679 9.19 956 795 0.68 720 390 0 0 t 0 0 0 0 0 0 0 0 184.07 253 348.47 164 202 1.12 1.03 384 137 249 0 0

LEP_MA1246.1_JASPAR_rc_shift1 (LEP:MA1246.1:JASPAR_rc) 0.822 0.431 0.545 0.918 0.927 384 953 936 247 329 569.800
; assembly_17 versus LEP_MA1246.1_JASPAR_rc (LEP:MA1246.1:JASPAR_rc); m=111/237; ncol2=21; w=-8; offset=-8; strand=R; shift=1; score= 569.8; -ggcggydgygrCGGCGGmG ; cor=0.822; Ncor=0.431; logoDP=0.545; NsEucl=0.918; NSW=0.927; rcor=384; rNcor=953; rlogoDP=936; rNsEucl=247; rNSW=329; rank_mean=569.800; match_rank= a 0 100 111 116 80 121 122 127 95 111 90 157 7 1 10 8 0 36 172 32 c 0 44 51 222 48 56 187 41 44 146 22 20 460 0 0 456 0 52 226 9 g 0 278 240 80 254 252 56 189 232 27 303 301 0 489 480 0 488 398 23 413 t 0 68 88 72 108 61 125 133 119 206 75 12 23 0 0 26 2 4 69 36

WIN1_M0006_1.02_CISBP_rc_shift8 (WIN1:M0006_1.02:CISBP_rc) 0.767 0.575 1.904 0.904 0.917 685 442 757 516 455 571.000
; assembly_17 versus WIN1_M0006_1.02_CISBP_rc (WIN1:M0006_1.02:CISBP_rc); m=112/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 571; --------aykGCGGyGb-- ; cor=0.767; Ncor=0.575; logoDP=1.904; NsEucl=0.904; NSW=0.917; rcor=685; rNcor=442; rlogoDP=757; rNsEucl=516; rNSW=455; rank_mean=571.000; match_rank= a 0 0 0 0 0 0 0 0 41 16 14 8 8 4 1 1 1 9 0 0 c 0 0 0 0 0 0 0 0 17 43 16 8 71 0 19 61 13 27 0 0 g 0 0 0 0 0 0 0 0 24 16 35 68 1 96 80 0 72 39 0 0 t 0 0 0 0 0 0 0 0 18 25 35 16 20 0 0 38 14 25 0 0

ERF13_MA1004.1_JASPAR_rc_shift12 (ERF13:MA1004.1:JASPAR_rc) 0.793 0.577 3.637 0.892 0.906 539 436 566 745 571 571.400
; assembly_17 versus ERF13_MA1004.1_JASPAR_rc (ERF13:MA1004.1:JASPAR_rc); m=113/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 571.4; ------------yGgCGGCs ; cor=0.793; Ncor=0.577; logoDP=3.637; NsEucl=0.892; NSW=0.906; rcor=539; rNcor=436; rlogoDP=566; rNsEucl=745; rNSW=571; rank_mean=571.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 154 0 113 0 0 0 0 22 c 0 0 0 0 0 0 0 0 0 0 0 0 282 0 145 983 16 32 951 283 g 0 0 0 0 0 0 0 0 0 0 0 0 103 999 645 16 983 951 49 478 t 0 0 0 0 0 0 0 0 0 0 0 0 461 0 97 0 0 16 0 217

ERF115_MA2013.2_JASPAR_rc_shift10 (ERF115:MA2013.2:JASPAR_rc) 0.794 0.662 0.679 0.900 0.900 534 169 908 599 653 572.600
; assembly_17 versus ERF115_MA2013.2_JASPAR_rc (ERF115:MA2013.2:JASPAR_rc); m=114/237; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 572.6; ----------kGCGGCGGCG ; cor=0.794; Ncor=0.662; logoDP=0.679; NsEucl=0.900; NSW=0.900; rcor=534; rNcor=169; rlogoDP=908; rNsEucl=599; rNSW=653; rank_mean=572.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 97 121 18 12 24 10 10 18 126 32 c 0 0 0 0 0 0 0 0 0 0 42 55 840 0 12 880 6 35 715 15 g 0 0 0 0 0 0 0 0 0 0 286 698 3 880 865 1 866 839 8 815 t 0 0 0 0 0 0 0 0 0 0 480 31 44 13 4 14 23 13 56 43

AT5G23930_UN0357.1_JASPAR_rc_shift11 (AT5G23930:UN0357.1:JASPAR_rc) 0.789 0.592 4.236 0.892 0.894 560 381 482 750 702 575.000
; assembly_17 versus AT5G23930_UN0357.1_JASPAR_rc (AT5G23930:UN0357.1:JASPAR_rc); m=115/237; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 575; -----------ryGGCGGCk ; cor=0.789; Ncor=0.592; logoDP=4.236; NsEucl=0.892; NSW=0.894; rcor=560; rNcor=381; rlogoDP=482; rNsEucl=750; rNSW=702; rank_mean=575.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 598 296 0 0 0 0 0 0 125 c 0 0 0 0 0 0 0 0 0 0 0 249 1135 0 0 2074 0 0 2074 91 g 0 0 0 0 0 0 0 0 0 0 0 1036 43 2074 2074 0 2074 2074 0 1323 t 0 0 0 0 0 0 0 0 0 0 0 191 600 0 0 0 0 0 0 535

ATERF13_M0020_1.02_CISBP_rc_shift12 (ATERF13:M0020_1.02:CISBP_rc) 0.791 0.575 3.598 0.891 0.906 544 443 571 755 582 579.000
; assembly_17 versus ATERF13_M0020_1.02_CISBP_rc (ATERF13:M0020_1.02:CISBP_rc); m=116/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 579; ------------yGgCGGCs ; cor=0.791; Ncor=0.575; logoDP=3.598; NsEucl=0.891; NSW=0.906; rcor=544; rNcor=443; rlogoDP=571; rNsEucl=755; rNSW=582; rank_mean=579.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 15 0 11 0 0 0 0 2 c 0 0 0 0 0 0 0 0 0 0 0 0 28 0 15 98 2 3 95 28 g 0 0 0 0 0 0 0 0 0 0 0 0 10 100 64 2 98 95 5 48 t 0 0 0 0 0 0 0 0 0 0 0 0 47 0 10 0 0 2 0 22

ERF7.DAP_M0018_AthalianaCistrome_rc_shift9 (ERF7.DAP:M0018:AthalianaCistrome_rc) 0.812 0.425 0.307 0.921 0.931 439 978 998 216 279 582.000
; assembly_17 versus ERF7.DAP_M0018_AthalianaCistrome_rc (ERF7.DAP:M0018:AthalianaCistrome_rc); m=117/237; ncol2=21; w=0; offset=0; strand=R; shift=9; score= 582; ---------tgrCGGCGGmG ; cor=0.812; Ncor=0.425; logoDP=0.307; NsEucl=0.921; NSW=0.931; rcor=439; rNcor=978; rlogoDP=998; rNsEucl=216; rNSW=279; rank_mean=582.000; match_rank= a 0 0 0 0 0 0 0 0 0 120 75 252 18 0 13 29 18 49 218 75 c 0 0 0 0 0 0 0 0 0 133 35 10 520 0 0 494 0 40 230 20 g 0 0 0 0 0 0 0 0 0 24 394 327 0 593 574 0 525 467 20 411 t 0 0 0 0 0 0 0 0 0 316 89 4 55 0 6 70 50 37 125 87

ERF115.DAP_M0081_AthalianaCistrome_rc_shift3 (ERF115.DAP:M0081:AthalianaCistrome_rc) 0.824 0.436 0.925 0.909 0.926 374 938 870 407 346 587.000
; assembly_17 versus ERF115.DAP_M0081_AthalianaCistrome_rc (ERF115.DAP:M0081:AthalianaCistrome_rc); m=118/237; ncol2=15; w=-6; offset=-6; strand=R; shift=3; score= 587; ---cGGcgrygRCGGCGG-- ; cor=0.824; Ncor=0.436; logoDP=0.925; NsEucl=0.909; NSW=0.926; rcor=374; rNcor=938; rlogoDP=870; rNsEucl=407; rNSW=346; rank_mean=587.000; match_rank= a 0 0 0 75 73 106 132 96 187 97 57 160 17 0 10 37 15 55 0 0 c 0 0 0 360 33 14 345 20 15 244 5 8 532 0 25 497 8 67 0 0 g 0 0 0 37 436 449 10 368 350 7 406 426 0 585 556 0 527 461 0 0 t 0 0 0 127 57 30 112 115 47 251 131 5 50 14 8 65 49 16 0 0

ATERF15_M0017_1.02_CISBP_rc_shift9 (ATERF15:M0017_1.02:CISBP_rc) 0.777 0.565 2.563 0.896 0.914 631 479 711 665 484 594.000
; assembly_17 versus ATERF15_M0017_1.02_CISBP_rc (ATERF15:M0017_1.02:CISBP_rc); m=119/237; ncol2=8; w=0; offset=0; strand=R; shift=9; score= 594; ---------gGCCGsCg--- ; cor=0.777; Ncor=0.565; logoDP=2.563; NsEucl=0.896; NSW=0.914; rcor=631; rNcor=479; rlogoDP=711; rNsEucl=665; rNSW=484; rank_mean=594.000; match_rank= a 0 0 0 0 0 0 0 0 0 14 3 3 5 3 3 3 17 0 0 0 c 0 0 0 0 0 0 0 0 0 17 3 71 84 5 34 89 13 0 0 0 g 0 0 0 0 0 0 0 0 0 59 91 23 3 89 61 5 50 0 0 0 t 0 0 0 0 0 0 0 0 0 10 3 3 8 3 2 3 20 0 0 0

RAP2-12_MA1256.2_JASPAR_shift7 (RAP2-12:MA1256.2:JASPAR) 0.781 0.541 5.386 0.891 0.892 610 567 313 763 726 595.800
; assembly_17 versus RAP2-12_MA1256.2_JASPAR (RAP2-12:MA1256.2:JASPAR); m=120/237; ncol2=11; w=-2; offset=-2; strand=D; shift=7; score= 595.8; -------rryGGCGGCGg-- ; cor=0.781; Ncor=0.541; logoDP=5.386; NsEucl=0.891; NSW=0.892; rcor=610; rNcor=567; rlogoDP=313; rNsEucl=763; rNSW=726; rank_mean=595.800; match_rank= a 0 0 0 0 0 0 0 266 274 68 10 52 0 0 0 7 9 66 0 0 c 0 0 0 0 0 0 0 14 15 207 6 0 596 0 0 575 6 101 0 0 g 0 0 0 0 0 0 0 170 184 4 494 542 0 596 596 0 517 402 0 0 t 0 0 0 0 0 0 0 147 124 318 87 3 1 1 1 15 65 28 0 0

ERF104.ampDAP_M0130_AthalianaCistrome_shift6 (ERF104.ampDAP:M0130:AthalianaCistrome) 0.745 0.547 5.357 0.900 0.891 794 547 319 589 747 599.200
; assembly_17 versus ERF104.ampDAP_M0130_AthalianaCistrome (ERF104.ampDAP:M0130:AthalianaCistrome); m=121/237; ncol2=15; w=-3; offset=-3; strand=D; shift=6; score= 599.2; ------ygryGGCGGCGgmg ; cor=0.745; Ncor=0.547; logoDP=5.357; NsEucl=0.900; NSW=0.891; rcor=794; rNcor=547; rlogoDP=319; rNsEucl=589; rNSW=747; rank_mean=599.200; match_rank= a 0 0 0 0 0 0 58 66 75 29 2 30 0 0 0 1 0 39 91 41 c 0 0 0 0 0 0 94 25 24 134 0 1 282 0 0 278 11 50 115 19 g 0 0 0 0 0 0 27 137 168 1 281 252 0 283 283 0 234 182 23 172 t 0 0 0 0 0 0 104 55 16 119 0 0 1 0 0 4 38 12 54 51

ERF13.ampDAP_M0032_AthalianaCistrome_shift9 (ERF13.ampDAP:M0032:AthalianaCistrome) 0.734 0.539 5.105 0.903 0.897 858 575 363 531 676 600.600
; assembly_17 versus ERF13.ampDAP_M0032_AthalianaCistrome (ERF13.ampDAP:M0032:AthalianaCistrome); m=122/237; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 600.6; ---------hwryGGCGGCk ; cor=0.734; Ncor=0.539; logoDP=5.105; NsEucl=0.903; NSW=0.897; rcor=858; rNcor=575; rlogoDP=363; rNsEucl=531; rNSW=676; rank_mean=600.600; match_rank= a 0 0 0 0 0 0 0 0 0 181 242 303 100 3 51 1 0 2 0 5 c 0 0 0 0 0 0 0 0 0 169 54 49 201 0 0 577 0 0 577 31 g 0 0 0 0 0 0 0 0 0 61 133 156 6 575 484 0 573 576 0 307 t 0 0 0 0 0 0 0 0 0 167 149 70 271 0 43 0 5 0 1 235

ATERF-4_M0022_1.02_CISBP_rc_shift10 (ATERF-4:M0022_1.02:CISBP_rc) 0.807 0.587 0.524 0.895 0.912 468 403 941 690 505 601.400
; assembly_17 versus ATERF-4_M0022_1.02_CISBP_rc (ATERF-4:M0022_1.02:CISBP_rc); m=123/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 601.4; ----------GgCGGCGg-- ; cor=0.807; Ncor=0.587; logoDP=0.524; NsEucl=0.895; NSW=0.912; rcor=468; rNcor=403; rlogoDP=941; rNsEucl=690; rNSW=505; rank_mean=601.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 4 15 0 0 1 1 9 9 0 0 c 0 0 0 0 0 0 0 0 0 0 4 13 99 1 8 95 12 22 0 0 g 0 0 0 0 0 0 0 0 0 0 80 66 0 98 90 2 73 52 0 0 t 0 0 0 0 0 0 0 0 0 0 12 6 1 1 1 2 6 17 0 0

EREB29_B73_1_m1_EEAD0343_EEADannot_rc_shift9 (EREB29_B73_1_m1:EEAD0343:EEADannot_rc) 0.723 0.723 4.335 0.895 0.878 924 67 468 695 854 601.600
; assembly_17 versus EREB29_B73_1_m1_EEAD0343_EEADannot_rc (EREB29_B73_1_m1:EEAD0343:EEADannot_rc); m=124/237; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 601.6; ---------cGrCGGCGGCG ; cor=0.723; Ncor=0.723; logoDP=4.335; NsEucl=0.895; NSW=0.878; rcor=924; rNcor=67; rlogoDP=468; rNsEucl=695; rNSW=854; rank_mean=601.600; match_rank= a 0 0 0 0 0 0 0 0 0 8 4 27 4 2 13 0 1 14 4 7 c 0 0 0 0 0 0 0 0 0 64 6 3 85 0 0 94 0 3 82 0 g 0 0 0 0 0 0 0 0 0 13 87 66 1 98 83 0 99 82 6 93 t 0 0 0 0 0 0 0 0 0 15 3 4 10 0 4 6 0 1 8 0

RAP212_MA1256.1_JASPAR_shift0 (RAP212:MA1256.1:JASPAR) 0.775 0.406 5.389 0.908 0.906 647 1059 310 432 570 603.600
; assembly_17 versus RAP212_MA1256.1_JASPAR (RAP212:MA1256.1:JASPAR); m=125/237; ncol2=21; w=-9; offset=-9; strand=D; shift=0; score= 603.6; cgghgrwrryGGCGGCGgmg ; cor=0.775; Ncor=0.406; logoDP=5.389; NsEucl=0.908; NSW=0.906; rcor=647; rNcor=1059; rlogoDP=310; rNsEucl=432; rNSW=570; rank_mean=603.600; match_rank= a 127 133 140 159 133 191 244 266 274 68 10 52 0 0 0 7 9 66 228 98 c 224 64 86 192 83 72 131 14 15 207 6 0 596 0 0 575 6 101 188 42 g 119 286 276 90 250 250 52 170 184 4 494 542 0 596 596 0 517 402 49 350 t 127 114 95 156 131 84 170 147 124 318 87 3 1 1 1 15 65 28 132 107

ERF4_MA0992.1_JASPAR_rc_shift10 (ERF4:MA0992.1:JASPAR_rc) 0.806 0.586 0.528 0.895 0.911 472 405 939 698 507 604.200
; assembly_17 versus ERF4_MA0992.1_JASPAR_rc (ERF4:MA0992.1:JASPAR_rc); m=126/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 604.2; ----------GgCGGCGg-- ; cor=0.806; Ncor=0.586; logoDP=0.528; NsEucl=0.895; NSW=0.911; rcor=472; rNcor=405; rlogoDP=939; rNsEucl=698; rNSW=507; rank_mean=604.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 39 150 0 0 6 6 94 90 0 0 c 0 0 0 0 0 0 0 0 0 0 39 131 988 12 83 952 115 225 0 0 g 0 0 0 0 0 0 0 0 0 0 800 662 6 976 899 18 726 517 0 0 t 0 0 0 0 0 0 0 0 0 0 123 56 6 12 12 24 65 169 0 0

0100010458_M0076_1.02_CISBP_rc_shift12 (0100010458:M0076_1.02:CISBP_rc) 0.786 0.572 4.096 0.887 0.897 575 456 504 820 677 606.400
; assembly_17 versus 0100010458_M0076_1.02_CISBP_rc (0100010458:M0076_1.02:CISBP_rc); m=127/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 606.4; ------------yGGCGGCg ; cor=0.786; Ncor=0.572; logoDP=4.096; NsEucl=0.887; NSW=0.897; rcor=575; rNcor=456; rlogoDP=504; rNsEucl=820; rNSW=677; rank_mean=606.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 7 0 6 0 0 0 0 8 c 0 0 0 0 0 0 0 0 0 0 0 0 32 0 21 100 2 8 100 14 g 0 0 0 0 0 0 0 0 0 0 0 0 3 100 71 0 98 92 0 60 t 0 0 0 0 0 0 0 0 0 0 0 0 58 0 2 0 0 0 0 18

EREB2_B73_1_m1_EEAD0345_EEADannot_rc_shift9 (EREB2_B73_1_m1:EEAD0345:EEADannot_rc) 0.717 0.717 4.413 0.895 0.879 963 76 461 686 846 606.400
; assembly_17 versus EREB2_B73_1_m1_EEAD0345_EEADannot_rc (EREB2_B73_1_m1:EEAD0345:EEADannot_rc); m=128/237; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 606.4; ---------cGRCGGCGGCG ; cor=0.717; Ncor=0.717; logoDP=4.413; NsEucl=0.895; NSW=0.879; rcor=963; rNcor=76; rlogoDP=461; rNsEucl=686; rNSW=846; rank_mean=606.400; match_rank= a 0 0 0 0 0 0 0 0 0 6 7 26 6 0 12 0 0 12 6 7 c 0 0 0 0 0 0 0 0 0 65 4 0 83 0 3 96 0 4 80 2 g 0 0 0 0 0 0 0 0 0 12 87 70 1 100 77 0 100 78 6 88 t 0 0 0 0 0 0 0 0 0 17 2 4 10 0 8 4 0 6 8 3

ERF10.ampDAP_M0091_AthalianaCistrome_shift0 (ERF10.ampDAP:M0091:AthalianaCistrome) 0.771 0.424 6.003 0.904 0.899 661 983 229 505 657 607.000
; assembly_17 versus ERF10.ampDAP_M0091_AthalianaCistrome (ERF10.ampDAP:M0091:AthalianaCistrome); m=129/237; ncol2=20; w=-9; offset=-9; strand=D; shift=0; score= 607; cgrhrrwwrtGGCGGCGghk ; cor=0.771; Ncor=0.424; logoDP=6.003; NsEucl=0.904; NSW=0.899; rcor=661; rNcor=983; rlogoDP=229; rNsEucl=505; rNSW=657; rank_mean=607.000; match_rank= a 135 126 149 148 153 194 212 247 254 58 2 42 0 0 0 1 1 39 219 141 c 181 107 93 174 73 80 105 31 37 132 0 0 565 0 0 564 0 138 162 26 g 123 203 214 96 224 202 58 123 183 4 507 513 0 565 565 0 549 362 35 247 t 126 129 109 147 115 89 190 164 91 371 56 10 0 0 0 0 15 26 149 151

LOB_MA2022.1_JASPAR_rc_shift4 (LOB:MA2022.1:JASPAR_rc) 0.790 0.511 0.664 0.910 0.911 549 674 910 389 515 607.400
; assembly_17 versus LOB_MA2022.1_JASPAR_rc (LOB:MA2022.1:JASPAR_rc); m=130/237; ncol2=17; w=-5; offset=-5; strand=R; shift=4; score= 607.4; ----ggcrgckGCGGCGGCG ; cor=0.790; Ncor=0.511; logoDP=0.664; NsEucl=0.910; NSW=0.911; rcor=549; rNcor=674; rlogoDP=910; rNsEucl=389; rNSW=515; rank_mean=607.400; match_rank= a 0 0 0 0 167 140 178 261 113 101 103 50 24 27 16 23 24 18 133 86 c 0 0 0 0 87 96 373 56 71 532 44 38 733 8 7 729 4 10 552 24 g 0 0 0 0 382 463 74 331 538 33 398 693 1 721 768 4 739 760 18 569 t 0 0 0 0 159 96 170 147 73 129 250 14 37 39 4 39 28 7 92 116

ERF73.ampDAP_M0138_AthalianaCistrome_shift8 (ERF73.ampDAP:M0138:AthalianaCistrome) 0.781 0.409 5.947 0.905 0.900 612 1043 237 500 648 608.000
; assembly_17 versus ERF73.ampDAP_M0138_AthalianaCistrome (ERF73.ampDAP:M0138:AthalianaCistrome); m=131/237; ncol2=21; w=-1; offset=-1; strand=D; shift=8; score= 608; --------ryGGCGGCGGmG ; cor=0.781; Ncor=0.409; logoDP=5.947; NsEucl=0.905; NSW=0.900; rcor=612; rNcor=1043; rlogoDP=237; rNsEucl=500; rNSW=648; rank_mean=608.000; match_rank= a 0 0 0 0 0 0 0 0 73 14 7 14 2 1 0 0 0 9 63 22 c 0 0 0 0 0 0 0 0 6 62 2 1 174 0 0 175 2 21 66 4 g 0 0 0 0 0 0 0 0 73 9 147 161 0 175 175 0 168 143 4 129 t 0 0 0 0 0 0 0 0 24 91 20 0 0 0 1 1 6 3 43 21

ERF9.ampDAP_M0096_AthalianaCistrome_rc_shift5 (ERF9.ampDAP:M0096:AthalianaCistrome_rc) 0.778 0.504 2.776 0.907 0.905 623 703 684 444 587 608.200
; assembly_17 versus ERF9.ampDAP_M0096_AthalianaCistrome_rc (ERF9.ampDAP:M0096:AthalianaCistrome_rc); m=132/237; ncol2=17; w=-4; offset=-4; strand=R; shift=5; score= 608.2; -----rwwatGGCGGCGgmg ; cor=0.778; Ncor=0.504; logoDP=2.776; NsEucl=0.907; NSW=0.905; rcor=623; rNcor=703; rlogoDP=684; rNsEucl=444; rNSW=587; rank_mean=608.200; match_rank= a 0 0 0 0 0 212 256 274 304 85 7 140 0 0 0 0 0 27 214 126 c 0 0 0 0 0 74 92 23 20 107 0 0 572 0 0 571 4 141 184 32 g 0 0 0 0 0 203 70 86 112 1 523 420 0 572 572 0 537 375 57 316 t 0 0 0 0 0 83 154 189 136 379 42 12 0 0 0 1 31 29 117 98

LFY_MA0590.1_JASPAR_shift5 (LFY:MA0590.1:JASPAR) 0.762 0.441 4.294 0.909 0.909 711 926 471 404 530 608.400
; assembly_17 versus LFY_MA0590.1_JASPAR (LFY:MA0590.1:JASPAR); m=133/237; ncol2=19; w=-4; offset=-4; strand=D; shift=5; score= 608.4; -----yATkrACCGsCGGTy ; cor=0.762; Ncor=0.441; logoDP=4.294; NsEucl=0.909; NSW=0.909; rcor=711; rNcor=926; rlogoDP=471; rNsEucl=404; rNSW=530; rank_mean=608.400; match_rank= a 0 0 0 0 0 32 266 56 20 126 228 10 0 94 35 10 19 8 50 4 c 0 0 0 0 0 104 13 75 7 0 43 364 358 2 174 273 0 0 2 246 g 0 0 0 0 0 49 17 12 178 246 2 0 0 273 174 2 358 364 43 0 t 0 0 0 0 0 199 80 325 360 4 50 8 19 10 35 94 0 10 228 126

EREB29_Mo17_1_EEAD0344_EEADannot_shift9 (EREB29_Mo17_1:EEAD0344:EEADannot) 0.719 0.719 5.208 0.892 0.871 951 70 345 751 930 609.400
; assembly_17 versus EREB29_Mo17_1_EEAD0344_EEADannot (EREB29_Mo17_1:EEAD0344:EEADannot); m=134/237; ncol2=11; w=0; offset=0; strand=D; shift=9; score= 609.4; ---------cGGCGGCGGCG ; cor=0.719; Ncor=0.719; logoDP=5.208; NsEucl=0.892; NSW=0.871; rcor=951; rNcor=70; rlogoDP=345; rNsEucl=751; rNSW=930; rank_mean=609.400; match_rank= a 0 0 0 0 0 0 0 0 0 10 4 19 4 0 11 2 0 3 9 7 c 0 0 0 0 0 0 0 0 0 65 1 0 85 0 0 96 0 8 80 2 g 0 0 0 0 0 0 0 0 0 7 94 78 0 99 87 0 99 86 5 88 t 0 0 0 0 0 0 0 0 0 18 1 3 11 1 2 2 1 3 6 3

ERF4_MA0992.3_JASPAR_rc_shift9 (ERF4:MA0992.3:JASPAR_rc) 0.781 0.639 2.280 0.890 0.892 609 218 731 767 737 612.400
; assembly_17 versus ERF4_MA0992.3_JASPAR_rc (ERF4:MA0992.3:JASPAR_rc); m=135/237; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 612.4; ---------TGrCGGCGg-- ; cor=0.781; Ncor=0.639; logoDP=2.280; NsEucl=0.890; NSW=0.892; rcor=609; rNcor=218; rlogoDP=731; rNsEucl=767; rNSW=737; rank_mean=612.400; match_rank= a 0 0 0 0 0 0 0 0 0 86 56 627 8 1 17 19 5 126 0 0 c 0 0 0 0 0 0 0 0 0 91 25 13 1006 2 9 979 2 165 0 0 g 0 0 0 0 0 0 0 0 0 19 900 349 0 1015 992 1 1005 644 0 0 t 0 0 0 0 0 0 0 0 0 827 42 34 9 5 5 24 11 88 0 0

ERF1B_MA0567.1_JASPAR_rc_shift12 (ERF1B:MA0567.1:JASPAR_rc) 0.790 0.574 3.654 0.885 0.894 553 445 564 835 701 619.600
; assembly_17 versus ERF1B_MA0567.1_JASPAR_rc (ERF1B:MA0567.1:JASPAR_rc); m=136/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 619.6; ------------tGGCGGCk ; cor=0.790; Ncor=0.574; logoDP=3.654; NsEucl=0.885; NSW=0.894; rcor=553; rNcor=445; rlogoDP=564; rNsEucl=835; rNSW=701; rank_mean=619.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 12 1 4 1 0 1 1 1 c 0 0 0 0 0 0 0 0 0 0 0 0 24 1 2 97 0 1 98 3 g 0 0 0 0 0 0 0 0 0 0 0 0 5 98 92 0 96 98 1 54 t 0 0 0 0 0 0 0 0 0 0 0 0 58 1 2 2 4 0 1 42

RAP2-10_MA0980.1_JASPAR_rc_shift13 (RAP2-10:MA0980.1:JASPAR_rc) 0.848 0.495 0.671 0.891 0.918 268 733 909 754 446 622.000
; assembly_17 versus RAP2-10_MA0980.1_JASPAR_rc (RAP2-10:MA0980.1:JASPAR_rc); m=137/237; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 622; -------------GGCGGCG ; cor=0.848; Ncor=0.495; logoDP=0.671; NsEucl=0.891; NSW=0.918; rcor=268; rNcor=733; rlogoDP=909; rNsEucl=754; rNSW=446; rank_mean=622.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 92 69 32 6 4 7 22 c 0 0 0 0 0 0 0 0 0 0 0 0 0 16 85 952 9 78 872 14 g 0 0 0 0 0 0 0 0 0 0 0 0 0 859 838 7 981 912 5 942 t 0 0 0 0 0 0 0 0 0 0 0 0 0 33 8 9 4 6 117 22

JUB1_MA2017.1_JASPAR_shift8 (JUB1:MA2017.1:JASPAR) 0.714 0.561 4.687 0.903 0.897 987 503 429 525 674 623.600
; assembly_17 versus JUB1_MA2017.1_JASPAR (JUB1:MA2017.1:JASPAR); m=138/237; ncol2=14; w=-1; offset=-1; strand=D; shift=8; score= 623.6; --------dycACGGCGagt ; cor=0.714; Ncor=0.561; logoDP=4.687; NsEucl=0.903; NSW=0.897; rcor=987; rNcor=503; rlogoDP=429; rNsEucl=525; rNSW=674; rank_mean=623.600; match_rank= a 0 0 0 0 0 0 0 0 151 113 96 458 9 9 3 12 33 288 68 67 c 0 0 0 0 0 0 0 0 79 153 236 30 492 8 12 476 10 36 122 47 g 0 0 0 0 0 0 0 0 132 65 115 10 0 489 492 0 457 82 196 121 t 0 0 0 0 0 0 0 0 147 178 62 11 8 3 2 21 9 103 123 274

ABR1.ampDAP_M0034_AthalianaCistrome_rc_shift2 (ABR1.ampDAP:M0034:AthalianaCistrome_rc) 0.797 0.417 0.850 0.915 0.920 514 1011 886 296 419 625.200
; assembly_17 versus ABR1.ampDAP_M0034_AthalianaCistrome_rc (ABR1.ampDAP:M0034:AthalianaCistrome_rc); m=139/237; ncol2=21; w=-7; offset=-7; strand=R; shift=2; score= 625.2; --rygrawaTkGCGGCGgmg ; cor=0.797; Ncor=0.417; logoDP=0.850; NsEucl=0.915; NSW=0.920; rcor=514; rNcor=1011; rlogoDP=886; rNsEucl=296; rNSW=419; rank_mean=625.200; match_rank= a 0 0 154 129 133 200 262 284 378 70 27 103 0 0 0 0 0 57 198 116 c 0 0 98 185 99 85 115 30 3 78 0 5 582 0 0 583 5 126 205 47 g 0 0 207 123 224 224 82 120 82 0 319 449 0 583 583 0 468 374 69 302 t 0 0 124 146 127 74 124 149 120 435 237 26 1 0 0 0 110 26 111 118

Zm00001d020267_MA1817.1_JASPAR_rc_shift8 (Zm00001d020267:MA1817.1:JASPAR_rc) 0.730 0.618 4.057 0.897 0.882 877 279 509 662 828 631.000
; assembly_17 versus Zm00001d020267_MA1817.1_JASPAR_rc (Zm00001d020267:MA1817.1:JASPAR_rc); m=140/237; ncol2=13; w=-1; offset=-1; strand=R; shift=8; score= 631; --------gcGGCGGCGGCg ; cor=0.730; Ncor=0.618; logoDP=4.057; NsEucl=0.897; NSW=0.882; rcor=877; rNcor=279; rlogoDP=509; rNsEucl=662; rNSW=828; rank_mean=631.000; match_rank= a 0 0 0 0 0 0 0 0 2485 1892 420 508 471 329 399 331 351 403 488 1929 c 0 0 0 0 0 0 0 0 3317 7641 760 657 13639 446 632 13656 555 683 13149 2985 g 0 0 0 0 0 0 0 0 6993 3064 13267 13257 233 13749 13462 247 13624 13416 711 8346 t 0 0 0 0 0 0 0 0 2006 2204 354 379 458 277 308 567 271 299 453 1541

ERF7.ampDAP_M0063_AthalianaCistrome_shift8 (ERF7.ampDAP:M0063:AthalianaCistrome) 0.765 0.401 5.442 0.906 0.903 697 1083 304 467 613 632.800
; assembly_17 versus ERF7.ampDAP_M0063_AthalianaCistrome (ERF7.ampDAP:M0063:AthalianaCistrome); m=141/237; ncol2=21; w=-1; offset=-1; strand=D; shift=8; score= 632.8; --------ayGGCGGCGgmr ; cor=0.765; Ncor=0.401; logoDP=5.442; NsEucl=0.906; NSW=0.903; rcor=697; rNcor=1083; rlogoDP=304; rNsEucl=467; rNSW=613; rank_mean=632.800; match_rank= a 0 0 0 0 0 0 0 0 315 59 2 103 0 0 0 1 0 65 219 151 c 0 0 0 0 0 0 0 0 23 164 0 1 579 0 2 577 7 119 172 33 g 0 0 0 0 0 0 0 0 120 7 537 469 0 579 576 0 481 365 69 301 t 0 0 0 0 0 0 0 0 121 349 40 6 0 0 1 1 91 30 119 94

ERF077_MA1240.2_JASPAR_rc_shift11 (ERF077:MA1240.2:JASPAR_rc) 0.768 0.576 3.879 0.889 0.890 679 438 532 782 758 637.800
; assembly_17 versus ERF077_MA1240.2_JASPAR_rc (ERF077:MA1240.2:JASPAR_rc); m=142/237; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 637.8; -----------ryGGCGGCG ; cor=0.768; Ncor=0.576; logoDP=3.879; NsEucl=0.889; NSW=0.890; rcor=679; rNcor=438; rlogoDP=532; rNsEucl=782; rNSW=758; rank_mean=637.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 175 53 9 55 0 0 0 85 4 c 0 0 0 0 0 0 0 0 0 0 0 42 323 0 0 544 0 0 448 6 g 0 0 0 0 0 0 0 0 0 0 0 310 0 528 511 0 571 571 0 538 t 0 0 0 0 0 0 0 0 0 0 0 44 195 34 5 27 0 0 38 23

ERF118_MA1671.2_JASPAR_rc_shift10 (ERF118:MA1671.2:JASPAR_rc) 0.809 0.588 0.838 0.888 0.900 462 393 887 805 652 639.800
; assembly_17 versus ERF118_MA1671.2_JASPAR_rc (ERF118:MA1671.2:JASPAR_rc); m=143/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 639.8; ----------gGCGGCGg-- ; cor=0.809; Ncor=0.588; logoDP=0.838; NsEucl=0.888; NSW=0.900; rcor=462; rNcor=393; rlogoDP=887; rNsEucl=805; rNSW=652; rank_mean=639.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 617 48 30 7 1 10 26 482 0 0 c 0 0 0 0 0 0 0 0 0 0 286 11 3190 3 2 3186 0 354 0 0 g 0 0 0 0 0 0 0 0 0 0 1903 3338 9 3370 3396 8 3343 2309 0 0 t 0 0 0 0 0 0 0 0 0 0 593 2 170 19 0 195 30 254 0 0

ERF057_MA1753.1_JASPAR_rc_shift9 (ERF057:MA1753.1:JASPAR_rc) 0.753 0.552 1.212 0.906 0.902 758 528 818 475 622 640.200
; assembly_17 versus ERF057_MA1753.1_JASPAR_rc (ERF057:MA1753.1:JASPAR_rc); m=144/237; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 640.2; ---------tGGCGGyGGhG ; cor=0.753; Ncor=0.552; logoDP=1.212; NsEucl=0.906; NSW=0.902; rcor=758; rNcor=528; rlogoDP=818; rNsEucl=475; rNSW=622; rank_mean=640.200; match_rank= a 0 0 0 0 0 0 0 0 0 199 91.696 171.28 32.872 0 0 10.381 3.46 58.824 337.37 93.426 c 0 0 0 0 0 0 0 0 0 189 0 12.111 874 0 0 578 12.111 44.983 389 31.142 g 0 0 0 0 0 0 0 0 0 130 856 694 3.46 1000 994.81 1.73 983 862 3.46 803 t 0 0 0 0 0 0 0 0 0 483 51.903 123 89.965 0 5.19 410 1.73 34.602 270 72.664

At5g65130.DAP_M0090_AthalianaCistrome_rc_shift9 (At5g65130.DAP:M0090:AthalianaCistrome_rc) 0.753 0.552 1.211 0.906 0.902 759 529 819 476 623 641.200
; assembly_17 versus At5g65130.DAP_M0090_AthalianaCistrome_rc (At5g65130.DAP:M0090:AthalianaCistrome_rc); m=145/237; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 641.2; ---------tGGCGGyGGhG ; cor=0.753; Ncor=0.552; logoDP=1.211; NsEucl=0.906; NSW=0.902; rcor=759; rNcor=529; rlogoDP=819; rNsEucl=476; rNSW=623; rank_mean=641.200; match_rank= a 0 0 0 0 0 0 0 0 0 115 53 99 19 0 0 6 2 34 195 54 c 0 0 0 0 0 0 0 0 0 109 0 7 505 0 0 334 7 26 225 18 g 0 0 0 0 0 0 0 0 0 75 495 401 2 578 575 1 568 498 2 464 t 0 0 0 0 0 0 0 0 0 279 30 71 52 0 3 237 1 20 156 42

ATERF-7_M0023_1.02_CISBP_rc_shift7 (ATERF-7:M0023_1.02:CISBP_rc) 0.795 0.489 0.192 0.904 0.926 529 758 1066 521 345 643.800
; assembly_17 versus ATERF-7_M0023_1.02_CISBP_rc (ATERF-7:M0023_1.02:CISBP_rc); m=146/237; ncol2=10; w=-2; offset=-2; strand=R; shift=7; score= 643.8; -------wwtgrCGGCk--- ; cor=0.795; Ncor=0.489; logoDP=0.192; NsEucl=0.904; NSW=0.926; rcor=529; rNcor=758; rlogoDP=1066; rNsEucl=521; rNSW=345; rank_mean=643.800; match_rank= a 0 0 0 0 0 0 0 31 32 20 13 27 1 6 0 4 16 0 0 0 c 0 0 0 0 0 0 0 20 20 21 7 13 88 4 8 87 14 0 0 0 g 0 0 0 0 0 0 0 21 20 17 59 45 2 77 87 1 44 0 0 0 t 0 0 0 0 0 0 0 28 28 42 21 15 9 13 5 8 26 0 0 0

LOC_Os08g36920_M0044_1.02_CISBP_rc_shift9 (LOC_Os08g36920:M0044_1.02:CISBP_rc) 0.713 0.648 0.298 0.905 0.909 991 196 1002 501 536 645.200
; assembly_17 versus LOC_Os08g36920_M0044_1.02_CISBP_rc (LOC_Os08g36920:M0044_1.02:CISBP_rc); m=147/237; ncol2=10; w=0; offset=0; strand=R; shift=9; score= 645.2; ---------tkrCGsCgsv- ; cor=0.713; Ncor=0.648; logoDP=0.298; NsEucl=0.905; NSW=0.909; rcor=991; rNcor=196; rlogoDP=1002; rNsEucl=501; rNSW=536; rank_mean=645.200; match_rank= a 0 0 0 0 0 0 0 0 0 23 22 30 0 0 3 4 19 24 27 0 c 0 0 0 0 0 0 0 0 0 23 16 0 100 0 31 79 24 25 25 0 g 0 0 0 0 0 0 0 0 0 19 32 49 0 100 64 0 34 32 25 0 t 0 0 0 0 0 0 0 0 0 35 30 21 0 0 2 17 23 19 23 0

ERF7_MA0993.1_JASPAR_rc_shift7 (ERF7:MA0993.1:JASPAR_rc) 0.794 0.489 0.194 0.904 0.926 531 762 1064 522 348 645.400
; assembly_17 versus ERF7_MA0993.1_JASPAR_rc (ERF7:MA0993.1:JASPAR_rc); m=148/237; ncol2=10; w=-2; offset=-2; strand=R; shift=7; score= 645.4; -------wwtgrCGGCk--- ; cor=0.794; Ncor=0.489; logoDP=0.194; NsEucl=0.904; NSW=0.926; rcor=531; rNcor=762; rlogoDP=1064; rNsEucl=522; rNSW=348; rank_mean=645.400; match_rank= a 0 0 0 0 0 0 0 312 317 198 128 266 10 65 0 35 156 0 0 0 c 0 0 0 0 0 0 0 201 198 210 66 132 875 36 84 874 140 0 0 0 g 0 0 0 0 0 0 0 209 208 174 593 456 25 770 868 14 442 0 0 0 t 0 0 0 0 0 0 0 279 276 419 212 146 90 129 48 77 263 0 0 0

ERF105_MA1000.3_JASPAR_shift11 (ERF105:MA1000.3:JASPAR) 0.755 0.566 5.541 0.882 0.876 741 475 286 864 884 650.000
; assembly_17 versus ERF105_MA1000.3_JASPAR (ERF105:MA1000.3:JASPAR); m=149/237; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 650; -----------ryGGCGGCG ; cor=0.755; Ncor=0.566; logoDP=5.541; NsEucl=0.882; NSW=0.876; rcor=741; rNcor=475; rlogoDP=286; rNsEucl=864; rNSW=884; rank_mean=650.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 189 50 0 21 1 0 0 21 1 c 0 0 0 0 0 0 0 0 0 0 0 37 307 0 0 569 0 1 544 0 g 0 0 0 0 0 0 0 0 0 0 0 312 0 586 565 0 586 585 0 523 t 0 0 0 0 0 0 0 0 0 0 0 48 229 0 0 16 0 0 21 62

AT4G18450_MA1228.1_JASPAR_shift8 (AT4G18450:MA1228.1:JASPAR) 0.747 0.483 5.345 0.900 0.889 783 773 322 605 767 650.000
; assembly_17 versus AT4G18450_MA1228.1_JASPAR (AT4G18450:MA1228.1:JASPAR); m=150/237; ncol2=17; w=-1; offset=-1; strand=D; shift=8; score= 650; --------ryGGCGGCGGmg ; cor=0.747; Ncor=0.483; logoDP=5.345; NsEucl=0.900; NSW=0.889; rcor=783; rNcor=773; rlogoDP=322; rNsEucl=605; rNSW=767; rank_mean=650.000; match_rank= a 0 0 0 0 0 0 0 0 187 78 0 34 0 0 0 13 6 85 179 91 c 0 0 0 0 0 0 0 0 52 289 0 0 526 0 0 505 7 69 205 25 g 0 0 0 0 0 0 0 0 263 0 534 503 0 537 537 0 472 378 32 337 t 0 0 0 0 0 0 0 0 35 170 3 0 11 0 0 19 52 5 121 84

EREB87_Mo17_1_EEAD0358_EEADannot_rc_shift9 (EREB87_Mo17_1:EEAD0358:EEADannot_rc) 0.718 0.718 4.618 0.889 0.863 961 74 436 799 987 651.400
; assembly_17 versus EREB87_Mo17_1_EEAD0358_EEADannot_rc (EREB87_Mo17_1:EEAD0358:EEADannot_rc); m=151/237; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 651.4; ---------cGGCGGCGGCG ; cor=0.718; Ncor=0.718; logoDP=4.618; NsEucl=0.889; NSW=0.863; rcor=961; rNcor=74; rlogoDP=436; rNsEucl=799; rNSW=987; rank_mean=651.400; match_rank= a 0 0 0 0 0 0 0 0 0 9 2 13 3 1 5 1 0 1 4 4 c 0 0 0 0 0 0 0 0 0 65 4 4 82 0 2 97 0 6 91 2 g 0 0 0 0 0 0 0 0 0 12 90 78 2 99 92 0 99 93 0 93 t 0 0 0 0 0 0 0 0 0 14 4 5 13 0 1 2 1 0 5 1

RAP2.6_M0010_1.02_CISBP_rc_shift10 (RAP2.6:M0010_1.02:CISBP_rc) 0.787 0.572 0.213 0.895 0.912 569 453 1054 693 506 655.000
; assembly_17 versus RAP2.6_M0010_1.02_CISBP_rc (RAP2.6:M0010_1.02:CISBP_rc); m=152/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 655; ----------gmCgGCrs-- ; cor=0.787; Ncor=0.572; logoDP=0.213; NsEucl=0.895; NSW=0.912; rcor=569; rNcor=453; rlogoDP=1054; rNsEucl=693; rNSW=506; rank_mean=655.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 22 27 7 23 13 0 33 24 0 0 c 0 0 0 0 0 0 0 0 0 0 10 36 70 11 5 95 18 32 0 0 g 0 0 0 0 0 0 0 0 0 0 48 19 9 63 78 0 38 26 0 0 t 0 0 0 0 0 0 0 0 0 0 20 18 14 3 4 5 11 18 0 0

AT2G33710_MA1245.2_JASPAR_rc_shift8 (AT2G33710:MA1245.2:JASPAR_rc) 0.737 0.614 2.855 0.893 0.886 837 290 665 723 792 661.400
; assembly_17 versus AT2G33710_MA1245.2_JASPAR_rc (AT2G33710:MA1245.2:JASPAR_rc); m=153/237; ncol2=11; w=-1; offset=-1; strand=R; shift=8; score= 661.4; --------ryGGCGGCGgh- ; cor=0.737; Ncor=0.614; logoDP=2.855; NsEucl=0.893; NSW=0.886; rcor=837; rNcor=290; rlogoDP=665; rNsEucl=723; rNSW=792; rank_mean=661.400; match_rank= a 0 0 0 0 0 0 0 0 783 327 48 28 37 7 3 49 48 410 657 0 c 0 0 0 0 0 0 0 0 243 1264 3 14 2236 1 37 2173 33 361 895 0 g 0 0 0 0 0 0 0 0 1165 73 2406 2446 3 2449 2454 20 2246 1507 302 0 t 0 0 0 0 0 0 0 0 304 831 38 7 219 38 1 253 168 217 641 0

RAP211.ampDAP_M0019_AthalianaCistrome_rc_shift6 (RAP211.ampDAP:M0019:AthalianaCistrome_rc) 0.736 0.539 1.701 0.905 0.901 852 571 768 487 630 661.600
; assembly_17 versus RAP211.ampDAP_M0019_AthalianaCistrome_rc (RAP211.ampDAP:M0019:AthalianaCistrome_rc); m=154/237; ncol2=15; w=-3; offset=-3; strand=R; shift=6; score= 661.6; ------mwywGCCGGCsaar ; cor=0.736; Ncor=0.539; logoDP=1.701; NsEucl=0.905; NSW=0.901; rcor=852; rNcor=571; rlogoDP=768; rNsEucl=487; rNSW=630; rank_mean=661.600; match_rank= a 0 0 0 0 0 0 220 201 142 191 18 0 0 0 4 1 63 267 229 214 c 0 0 0 0 0 0 179 78 167 142 0 586 587 0 7 586 340 69 90 90 g 0 0 0 0 0 0 70 144 86 105 568 1 0 587 485 0 158 140 138 178 t 0 0 0 0 0 0 118 164 192 149 1 0 0 0 91 0 26 111 130 105

LBD18_MA1673.1_JASPAR_rc_shift6 (LBD18:MA1673.1:JASPAR_rc) 0.786 0.505 0.330 0.902 0.913 573 700 986 562 492 662.600
; assembly_17 versus LBD18_MA1673.1_JASPAR_rc (LBD18:MA1673.1:JASPAR_rc); m=155/237; ncol2=12; w=-3; offset=-3; strand=R; shift=6; score= 662.6; ------wwTTTCCGGCga-- ; cor=0.786; Ncor=0.505; logoDP=0.330; NsEucl=0.902; NSW=0.913; rcor=573; rNcor=700; rlogoDP=986; rNsEucl=562; rNSW=492; rank_mean=662.600; match_rank= a 0 0 0 0 0 0 1910 1735 679 668 240 251 166 153 130 286 1449 2177 0 0 c 0 0 0 0 0 0 1247 671 384 1009 159 5338 5531 316 290 4833 833 922 0 0 g 0 0 0 0 0 0 1189 1201 472 191 93 171 40 5168 5323 245 2201 1402 0 0 t 0 0 0 0 0 0 1519 2258 4330 3997 5373 105 128 228 122 501 1382 1364 0 0

Os05g0497200_MA1034.1_JASPAR_rc_shift12 (Os05g0497200:MA1034.1:JASPAR_rc) 0.776 0.564 4.983 0.876 0.877 641 485 391 934 874 665.000
; assembly_17 versus Os05g0497200_MA1034.1_JASPAR_rc (Os05g0497200:MA1034.1:JASPAR_rc); m=156/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 665; ------------yGGCGsCG ; cor=0.776; Ncor=0.564; logoDP=4.983; NsEucl=0.876; NSW=0.877; rcor=641; rNcor=485; rlogoDP=391; rNsEucl=934; rNSW=874; rank_mean=665.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 5 3 3 3 3 3 3 3 c 0 0 0 0 0 0 0 0 0 0 0 0 495 3 3 990 3 332 990 3 g 0 0 0 0 0 0 0 0 0 0 0 0 5 990 990 3 990 661 3 990 t 0 0 0 0 0 0 0 0 0 0 0 0 495 3 3 3 3 3 3 3

LOC_Os05g41760_M0043_1.02_CISBP_rc_shift12 (LOC_Os05g41760:M0043_1.02:CISBP_rc) 0.775 0.564 5.118 0.875 0.875 643 488 360 945 894 666.000
; assembly_17 versus LOC_Os05g41760_M0043_1.02_CISBP_rc (LOC_Os05g41760:M0043_1.02:CISBP_rc); m=157/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 666; ------------yGGCGsCG ; cor=0.775; Ncor=0.564; logoDP=5.118; NsEucl=0.875; NSW=0.875; rcor=643; rNcor=488; rlogoDP=360; rNsEucl=945; rNSW=894; rank_mean=666.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 50 0 0 99 0 34 99 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 100 99 0 100 66 0 100 t 0 0 0 0 0 0 0 0 0 0 0 0 50 0 0 1 0 0 1 0

ERF3_MA1005.2_JASPAR_rc_shift8 (ERF3:MA1005.2:JASPAR_rc) 0.736 0.614 2.953 0.892 0.884 843 292 647 739 810 666.200
; assembly_17 versus ERF3_MA1005.2_JASPAR_rc (ERF3:MA1005.2:JASPAR_rc); m=158/237; ncol2=11; w=-1; offset=-1; strand=R; shift=8; score= 666.2; --------ryGGCGGCGgh- ; cor=0.736; Ncor=0.614; logoDP=2.953; NsEucl=0.892; NSW=0.884; rcor=843; rNcor=292; rlogoDP=647; rNsEucl=739; rNSW=810; rank_mean=666.200; match_rank= a 0 0 0 0 0 0 0 0 563 252 18 22 35 8 2 31 41 319 491 0 c 0 0 0 0 0 0 0 0 194 925 1 7 1697 1 3 1658 16 257 644 0 g 0 0 0 0 0 0 0 0 887 48 1852 1852 2 1844 1878 8 1713 1145 229 0 t 0 0 0 0 0 0 0 0 239 658 12 2 149 30 0 186 113 162 519 0

ERF2_MA1262.2_JASPAR_rc_shift8 (ERF2:MA1262.2:JASPAR_rc) 0.714 0.604 3.440 0.898 0.885 989 329 587 639 801 669.000
; assembly_17 versus ERF2_MA1262.2_JASPAR_rc (ERF2:MA1262.2:JASPAR_rc); m=159/237; ncol2=13; w=-1; offset=-1; strand=R; shift=8; score= 669; --------ryGGCGGCGghg ; cor=0.714; Ncor=0.604; logoDP=3.440; NsEucl=0.898; NSW=0.885; rcor=989; rNcor=329; rlogoDP=587; rNsEucl=639; rNSW=801; rank_mean=669.000; match_rank= a 0 0 0 0 0 0 0 0 212 65 0 30 2 0 2 44 17 109 197 118 c 0 0 0 0 0 0 0 0 52 353 0 0 550 0 0 509 9 85 190 27 g 0 0 0 0 0 0 0 0 305 0 595 565 0 588 590 0 451 367 46 348 t 0 0 0 0 0 0 0 0 26 177 0 0 43 7 3 42 118 34 162 102

RAP2.6_RAP2.6_ArabidopsisPBM_rc_shift12 (RAP2.6:RAP2.6:ArabidopsisPBM_rc) 0.826 0.508 0.685 0.890 0.903 363 693 906 778 612 670.400
; assembly_17 versus RAP2.6_RAP2.6_ArabidopsisPBM_rc (RAP2.6:RAP2.6:ArabidopsisPBM_rc); m=160/237; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 670.4; ------------yGGCGGCG ; cor=0.826; Ncor=0.508; logoDP=0.685; NsEucl=0.890; NSW=0.903; rcor=363; rNcor=693; rlogoDP=906; rNsEucl=778; rNSW=612; rank_mean=670.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 6 1 2 0 0 0 0 1 c 0 0 0 0 0 0 0 0 0 0 0 0 61 0 1 100 0 10 99 1 g 0 0 0 0 0 0 0 0 0 0 0 0 3 92 95 0 98 90 0 95 t 0 0 0 0 0 0 0 0 0 0 0 0 30 7 2 0 2 0 1 3

ERF2_MA1262.1_JASPAR_rc_shift9 (ERF2:MA1262.1:JASPAR_rc) 0.791 0.414 0.280 0.913 0.917 547 1021 1017 324 454 672.600
; assembly_17 versus ERF2_MA1262.1_JASPAR_rc (ERF2:MA1262.1:JASPAR_rc); m=161/237; ncol2=21; w=0; offset=0; strand=R; shift=9; score= 672.6; ---------ygryGGCGGCG ; cor=0.791; Ncor=0.414; logoDP=0.280; NsEucl=0.913; NSW=0.917; rcor=547; rNcor=1021; rlogoDP=1017; rNsEucl=324; rNSW=454; rank_mean=672.600; match_rank= a 0 0 0 0 0 0 0 0 0 136 144 212 65 0 30 2 0 2 44 17 c 0 0 0 0 0 0 0 0 0 212 78 52 353 0 0 550 0 0 509 9 g 0 0 0 0 0 0 0 0 0 29 251 305 0 595 565 0 588 590 0 451 t 0 0 0 0 0 0 0 0 0 218 122 26 177 0 0 43 7 3 42 118

Zm00001d020267_MA1817.2_JASPAR_rc_shift10 (Zm00001d020267:MA1817.2:JASPAR_rc) 0.736 0.670 2.829 0.888 0.875 842 152 672 803 895 672.800
; assembly_17 versus Zm00001d020267_MA1817.2_JASPAR_rc (Zm00001d020267:MA1817.2:JASPAR_rc); m=162/237; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 672.8; ----------GGCGGCGGCg ; cor=0.736; Ncor=0.670; logoDP=2.829; NsEucl=0.888; NSW=0.875; rcor=842; rNcor=152; rlogoDP=672; rNsEucl=803; rNSW=895; rank_mean=672.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 420 508 471 329 399 331 351 403 488 1929 c 0 0 0 0 0 0 0 0 0 0 760 657 13639 446 632 13656 555 683 13149 2985 g 0 0 0 0 0 0 0 0 0 0 13267 13257 233 13749 13462 247 13624 13416 711 8346 t 0 0 0 0 0 0 0 0 0 0 354 379 458 277 308 567 271 299 453 1541

EREB46_ZmSHINE_Mo17_1_EEAD0350_EEADannot_rc_shift9 (EREB46_ZmSHINE_Mo17_1:EEAD0350:EEADannot_rc) 0.707 0.707 4.108 0.889 0.865 1044 99 503 785 966 679.400
; assembly_17 versus EREB46_ZmSHINE_Mo17_1_EEAD0350_EEADannot_rc (EREB46_ZmSHINE_Mo17_1:EEAD0350:EEADannot_rc); m=163/237; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 679.4; ---------cGGCGGCGGCG ; cor=0.707; Ncor=0.707; logoDP=4.108; NsEucl=0.889; NSW=0.865; rcor=1044; rNcor=99; rlogoDP=503; rNsEucl=785; rNSW=966; rank_mean=679.400; match_rank= a 0 0 0 0 0 0 0 0 0 10 3 11 6 1 3 0 0 3 8 4 c 0 0 0 0 0 0 0 0 0 67 0 0 81 0 0 84 0 7 76 2 g 0 0 0 0 0 0 0 0 0 7 95 81 0 99 94 1 100 88 3 94 t 0 0 0 0 0 0 0 0 0 16 2 8 13 0 3 15 0 2 13 0

ERF5_M0039_1.02_CISBP_rc_shift9 (ERF5:M0039_1.02:CISBP_rc) 0.710 0.646 0.220 0.903 0.906 1021 205 1051 539 583 679.800
; assembly_17 versus ERF5_M0039_1.02_CISBP_rc (ERF5:M0039_1.02:CISBP_rc); m=164/237; ncol2=10; w=0; offset=0; strand=R; shift=9; score= 679.8; ---------kggcggCksd- ; cor=0.710; Ncor=0.646; logoDP=0.220; NsEucl=0.903; NSW=0.906; rcor=1021; rNcor=205; rlogoDP=1051; rNsEucl=539; rNSW=583; rank_mean=679.800; match_rank= a 0 0 0 0 0 0 0 0 0 21 12 24 8 7 9 5 17 23 25 0 c 0 0 0 0 0 0 0 0 0 17 11 21 59 7 18 75 18 27 20 0 g 0 0 0 0 0 0 0 0 0 30 60 35 12 67 61 6 37 27 28 0 t 0 0 0 0 0 0 0 0 0 32 17 20 21 19 12 14 28 23 27 0

ERF73.DAP_M0117_AthalianaCistrome_rc_shift3 (ERF73.DAP:M0117:AthalianaCistrome_rc) 0.778 0.408 3.076 0.905 0.901 625 1047 632 483 627 682.800
; assembly_17 versus ERF73.DAP_M0117_AthalianaCistrome_rc (ERF73.DAP:M0117:AthalianaCistrome_rc); m=165/237; ncol2=21; w=-6; offset=-6; strand=R; shift=3; score= 682.8; ---ygrhdryGGCGGCGGmg ; cor=0.778; Ncor=0.408; logoDP=3.076; NsEucl=0.905; NSW=0.901; rcor=625; rNcor=1047; rlogoDP=632; rNsEucl=483; rNSW=627; rank_mean=682.800; match_rank= a 0 0 0 134 131 181 213 208 232 64 31 29 7 0 4 0 0 39 206 80 c 0 0 0 182 65 61 149 35 47 214 8 0 549 0 0 545 0 87 212 16 g 0 0 0 100 231 236 43 165 216 0 471 534 0 563 559 0 549 418 50 365 t 0 0 0 147 136 85 158 155 68 285 53 0 7 0 0 18 14 19 95 102

ERF073_MA1754.1_JASPAR_rc_shift3 (ERF073:MA1754.1:JASPAR_rc) 0.778 0.408 3.075 0.905 0.901 627 1048 633 484 628 684.000
; assembly_17 versus ERF073_MA1754.1_JASPAR_rc (ERF073:MA1754.1:JASPAR_rc); m=166/237; ncol2=21; w=-6; offset=-6; strand=R; shift=3; score= 684; ---ygrhdryGGCGGCGGmg ; cor=0.778; Ncor=0.408; logoDP=3.075; NsEucl=0.905; NSW=0.901; rcor=627; rNcor=1048; rlogoDP=633; rNsEucl=484; rNSW=628; rank_mean=684.000; match_rank= a 0 0 0 238 233 321 378.33 369 412 114 55.062 51.51 12.433 0 7.105 0 0 69.272 366 142 c 0 0 0 323 115 108 265 62.167 83.481 380 14.21 0 975 0 0 968 0 155 377 28.419 g 0 0 0 177.62 410 419 76.377 293 384 0 836.59 948.49 0 1000 993 0 975 742 88.81 648 t 0 0 0 261 242 151 281 275 121 506 94.139 0 12.433 0 0 31.972 24.867 33.748 169 181

EREB201_ZmCRF3_Mo17_1_EEAD0340_EEADannot_shift8 (EREB201_ZmCRF3_Mo17_1:EEAD0340:EEADannot) 0.718 0.599 5.055 0.887 0.872 956 355 379 817 922 685.800
; assembly_17 versus EREB201_ZmCRF3_Mo17_1_EEAD0340_EEADannot (EREB201_ZmCRF3_Mo17_1:EEAD0340:EEADannot); m=167/237; ncol2=11; w=-1; offset=-1; strand=D; shift=8; score= 685.8; --------cGGCCGGCmGs- ; cor=0.718; Ncor=0.599; logoDP=5.055; NsEucl=0.887; NSW=0.872; rcor=956; rNcor=355; rlogoDP=379; rNsEucl=817; rNSW=922; rank_mean=685.800; match_rank= a 0 0 0 0 0 0 0 0 18 6 0 8 0 0 0 0 42 16 4 0 c 0 0 0 0 0 0 0 0 58 17 0 88 99 0 0 100 36 10 46 0 g 0 0 0 0 0 0 0 0 6 77 100 4 1 98 100 0 20 71 43 0 t 0 0 0 0 0 0 0 0 18 0 0 0 0 2 0 0 2 3 7 0

ATERF-1_M0028_1.02_CISBP_rc_shift9 (ATERF-1:M0028_1.02:CISBP_rc) 0.724 0.592 0.862 0.897 0.904 915 376 883 661 605 688.000
; assembly_17 versus ATERF-1_M0028_1.02_CISBP_rc (ATERF-1:M0028_1.02:CISBP_rc); m=168/237; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 688; ---------kGrcGGCks-- ; cor=0.724; Ncor=0.592; logoDP=0.862; NsEucl=0.897; NSW=0.904; rcor=915; rNcor=376; rlogoDP=883; rNsEucl=661; rNSW=605; rank_mean=688.000; match_rank= a 0 0 0 0 0 0 0 0 0 23 12 28 8 6 6 0 12 20 0 0 c 0 0 0 0 0 0 0 0 0 14 7 13 62 3 5 95 11 26 0 0 g 0 0 0 0 0 0 0 0 0 32 68 35 9 78 83 0 47 32 0 0 t 0 0 0 0 0 0 0 0 0 31 13 24 21 13 6 5 30 22 0 0

AT1G75490_MA1250.1_JASPAR_rc_shift9 (AT1G75490:MA1250.1:JASPAR_rc) 0.734 0.539 1.069 0.904 0.898 857 574 839 518 668 691.200
; assembly_17 versus AT1G75490_MA1250.1_JASPAR_rc (AT1G75490:MA1250.1:JASPAR_rc); m=169/237; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 691.2; ---------wGgCGGYGGmg ; cor=0.734; Ncor=0.539; logoDP=1.069; NsEucl=0.904; NSW=0.898; rcor=857; rNcor=574; rlogoDP=839; rNsEucl=518; rNSW=668; rank_mean=691.200; match_rank= a 0 0 0 0 0 0 0 0 0 172 133 107 6 0 2 1 0 31 221 93 c 0 0 0 0 0 0 0 0 0 127 8 10 519 0 1 160 0 18 205 30 g 0 0 0 0 0 0 0 0 0 21 395 366 0 556 554 0 551 489 13 360 t 0 0 0 0 0 0 0 0 0 237 21 74 32 1 0 396 6 19 118 74

Solyc04g078640.3.1_AP2EREBP_1_AT1G46768_EEAD0649_EEADannot_shift13 (Solyc04g078640.3.1_AP2EREBP_1_AT1G46768:EEAD0649:EEADannot) 0.784 0.457 3.992 0.882 0.902 591 862 517 872 618 692.000
; assembly_17 versus Solyc04g078640.3.1_AP2EREBP_1_AT1G46768_EEAD0649_EEADannot (Solyc04g078640.3.1_AP2EREBP_1_AT1G46768:EEAD0649:EEADannot); m=170/237; ncol2=8; w=0; offset=4; strand=D; shift=13; score= 692; -------------GtCGGTG ; cor=0.784; Ncor=0.457; logoDP=3.992; NsEucl=0.882; NSW=0.902; rcor=591; rNcor=862; rlogoDP=517; rNsEucl=872; rNSW=618; rank_mean=692.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 2 23 0 0 0 5 7 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 93 0 0 18 6 g 0 0 0 0 0 0 0 0 0 0 0 0 0 91 18 0 100 100 0 70 t 0 0 0 0 0 0 0 0 0 0 0 0 0 7 51 7 0 0 77 17

Zm00001d024324_MA1820.1_JASPAR_rc_shift9 (Zm00001d024324:MA1820.1:JASPAR_rc) 0.735 0.622 0.766 0.898 0.885 855 272 895 640 805 693.400
; assembly_17 versus Zm00001d024324_MA1820.1_JASPAR_rc (Zm00001d024324:MA1820.1:JASPAR_rc); m=171/237; ncol2=13; w=0; offset=0; strand=R; shift=9; score= 693.4; ---------cgGCGGCGGCG ; cor=0.735; Ncor=0.622; logoDP=0.766; NsEucl=0.898; NSW=0.885; rcor=855; rNcor=272; rlogoDP=895; rNsEucl=640; rNSW=805; rank_mean=693.400; match_rank= a 0 0 0 0 0 0 0 0 0 3206 2945 949 761 623 792 609 593 627 714 676 c 0 0 0 0 0 0 0 0 0 11092 5360 1113 20848 864 1100 21141 695 934 20748 959 g 0 0 0 0 0 0 0 0 0 5407 11929 19965 425 20733 20319 350 20957 20683 627 20536 t 0 0 0 0 0 0 0 0 0 3014 2485 692 685 499 508 619 474 475 630 548

ABI4_ABI4_Athamap_rc_shift10 (ABI4:ABI4:Athamap_rc) 0.717 0.652 3.158 0.888 0.875 964 187 625 804 896 695.200
; assembly_17 versus ABI4_ABI4_Athamap_rc (ABI4:ABI4:Athamap_rc); m=172/237; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 695.2; ----------sggGGCGGyG ; cor=0.717; Ncor=0.652; logoDP=3.158; NsEucl=0.888; NSW=0.875; rcor=964; rNcor=187; rlogoDP=625; rNsEucl=804; rNSW=896; rank_mean=695.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 4 2 1 0 0 0 0 0 0 1 c 0 0 0 0 0 0 0 0 0 0 6 4 5 0 0 20 0 0 9 0 g 0 0 0 0 0 0 0 0 0 0 7 13 14 20 21 0 21 21 0 20 t 0 0 0 0 0 0 0 0 0 0 4 2 1 1 0 1 0 0 12 0

AT5G07580_M0035_1.02_CISBP_shift12 (AT5G07580:M0035_1.02:CISBP) 0.764 0.509 1.065 0.893 0.909 702 685 840 721 539 697.400
; assembly_17 versus AT5G07580_M0035_1.02_CISBP (AT5G07580:M0035_1.02:CISBP); m=173/237; ncol2=9; w=0; offset=3; strand=D; shift=12; score= 697.4; ------------ygsYGgcy ; cor=0.764; Ncor=0.509; logoDP=1.065; NsEucl=0.893; NSW=0.909; rcor=702; rNcor=685; rlogoDP=840; rNsEucl=721; rNSW=539; rank_mean=697.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 13 9 11 1 13 12 16 17 c 0 0 0 0 0 0 0 0 0 0 0 0 27 10 35 68 6 19 48 32 g 0 0 0 0 0 0 0 0 0 0 0 0 20 67 36 0 70 48 13 21 t 0 0 0 0 0 0 0 0 0 0 0 0 40 14 18 31 11 21 23 30

ERF104_MA1239.2_JASPAR_rc_shift8 (ERF104:MA1239.2:JASPAR_rc) 0.743 0.511 1.846 0.902 0.895 802 679 760 554 697 698.400
; assembly_17 versus ERF104_MA1239.2_JASPAR_rc (ERF104:MA1239.2:JASPAR_rc); m=174/237; ncol2=16; w=-1; offset=-1; strand=R; shift=8; score= 698.4; --------ryGGCGGCGgmg ; cor=0.743; Ncor=0.511; logoDP=1.846; NsEucl=0.902; NSW=0.895; rcor=802; rNcor=679; rlogoDP=760; rNsEucl=554; rNSW=697; rank_mean=698.400; match_rank= a 0 0 0 0 0 0 0 0 192 62 0 89 3 0 0 25 5 90 169 75 c 0 0 0 0 0 0 0 0 51 281 0 0 527 0 2 496 6 76 213 33 g 0 0 0 0 0 0 0 0 274 0 553 466 0 557 555 0 464 369 50 363 t 0 0 0 0 0 0 0 0 40 214 4 2 27 0 0 36 82 22 125 86

RAP2-6_MA1052.1_JASPAR_rc_shift13 (RAP2-6:MA1052.1:JASPAR_rc) 0.840 0.490 0.649 0.880 0.900 303 753 911 890 651 701.600
; assembly_17 versus RAP2-6_MA1052.1_JASPAR_rc (RAP2-6:MA1052.1:JASPAR_rc); m=175/237; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 701.6; -------------GGCGGCG ; cor=0.840; Ncor=0.490; logoDP=0.649; NsEucl=0.880; NSW=0.900; rcor=303; rNcor=753; rlogoDP=911; rNsEucl=890; rNSW=651; rank_mean=701.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 10 20 3 1 1 2 8 c 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 990 2 104 989 7 g 0 0 0 0 0 0 0 0 0 0 0 0 0 921 947 3 985 894 2 958 t 0 0 0 0 0 0 0 0 0 0 0 0 0 66 20 4 12 2 7 27

ESE1.ampDAP_M0133_AthalianaCistrome_shift7 (ESE1.ampDAP:M0133:AthalianaCistrome) 0.747 0.411 5.366 0.899 0.889 790 1039 316 608 772 705.000
; assembly_17 versus ESE1.ampDAP_M0133_AthalianaCistrome (ESE1.ampDAP:M0133:AthalianaCistrome); m=176/237; ncol2=20; w=-2; offset=-2; strand=D; shift=7; score= 705; -------rryGGCGGCGGcg ; cor=0.747; Ncor=0.411; logoDP=5.366; NsEucl=0.899; NSW=0.889; rcor=790; rNcor=1039; rlogoDP=316; rNsEucl=608; rNSW=772; rank_mean=705.000; match_rank= a 0 0 0 0 0 0 0 68 96 48 0 21 0 0 0 7 4 27 61 40 c 0 0 0 0 0 0 0 28 15 122 0 0 254 0 0 246 2 50 123 11 g 0 0 0 0 0 0 0 111 131 4 260 239 0 255 260 0 239 182 20 167 t 0 0 0 0 0 0 0 53 18 86 0 0 6 5 0 7 15 1 56 42

RAP2.3_RAP2.3_ArabidopsisPBM_rc_shift9 (RAP2.3:RAP2.3:ArabidopsisPBM_rc) 0.711 0.646 0.618 0.896 0.893 1016 202 917 666 725 705.200
; assembly_17 versus RAP2.3_RAP2.3_ArabidopsisPBM_rc (RAP2.3:RAP2.3:ArabidopsisPBM_rc); m=177/237; ncol2=10; w=0; offset=0; strand=R; shift=9; score= 705.2; ---------wkGCGGCGcy- ; cor=0.711; Ncor=0.646; logoDP=0.618; NsEucl=0.896; NSW=0.893; rcor=1016; rNcor=202; rlogoDP=917; rNsEucl=666; rNSW=725; rank_mean=705.200; match_rank= a 0 0 0 0 0 0 0 0 0 25 7 8 1 0 0 0 6 11 15 0 c 0 0 0 0 0 0 0 0 0 17 1 3 98 0 24 98 3 54 47 0 g 0 0 0 0 0 0 0 0 0 9 66 78 0 98 75 1 76 23 13 0 t 0 0 0 0 0 0 0 0 0 49 26 11 1 2 1 1 15 12 25 0

AT3G11100_UN0353.2_JASPAR_shift11 (AT3G11100:UN0353.2:JASPAR) 0.782 0.498 4.840 0.871 0.883 601 721 416 971 820 705.800
; assembly_17 versus AT3G11100_UN0353.2_JASPAR (AT3G11100:UN0353.2:JASPAR); m=178/237; ncol2=7; w=0; offset=2; strand=D; shift=11; score= 705.8; -----------mCGGCGA-- ; cor=0.782; Ncor=0.498; logoDP=4.840; NsEucl=0.871; NSW=0.883; rcor=601; rNcor=721; rlogoDP=416; rNsEucl=971; rNSW=820; rank_mean=705.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 1432 16 24 57 102 73 2127 0 0 c 0 0 0 0 0 0 0 0 0 0 0 652 2413 13 26 2298 55 58 0 0 g 0 0 0 0 0 0 0 0 0 0 0 254 6 2445 2394 12 2311 198 0 0 t 0 0 0 0 0 0 0 0 0 0 0 158 61 14 19 84 57 113 0 0

ERF15_MA1231.2_JASPAR_rc_shift10 (ERF15:MA1231.2:JASPAR_rc) 0.771 0.514 0.171 0.902 0.904 662 667 1070 558 600 711.400
; assembly_17 versus ERF15_MA1231.2_JASPAR_rc (ERF15:MA1231.2:JASPAR_rc); m=179/237; ncol2=14; w=0; offset=1; strand=R; shift=10; score= 711.4; ----------rrhGGCGGCk ; cor=0.771; Ncor=0.514; logoDP=0.171; NsEucl=0.902; NSW=0.904; rcor=662; rNcor=667; rlogoDP=1070; rNsEucl=558; rNSW=600; rank_mean=711.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 581 754 581 8 39 12 9 5 18 87 c 0 0 0 0 0 0 0 0 0 0 348 236 911 8 14 2067 3 1 2078 94 g 0 0 0 0 0 0 0 0 0 0 695 929 62 2107 2066 3 2062 2124 7 942 t 0 0 0 0 0 0 0 0 0 0 509 214 579 10 14 51 59 3 30 1010

ERF096_MA0998.1_JASPAR_rc_shift11 (ERF096:MA0998.1:JASPAR_rc) 0.725 0.544 2.753 0.893 0.896 905 553 689 731 684 712.400
; assembly_17 versus ERF096_MA0998.1_JASPAR_rc (ERF096:MA0998.1:JASPAR_rc); m=180/237; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 712.4; -----------rtGgCGGCk ; cor=0.725; Ncor=0.544; logoDP=2.753; NsEucl=0.893; NSW=0.896; rcor=905; rNcor=553; rlogoDP=689; rNsEucl=731; rNSW=684; rank_mean=712.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 290 200 38 149 19 32 27 13 76 c 0 0 0 0 0 0 0 0 0 0 0 223 240 24 131 928 21 36 939 167 g 0 0 0 0 0 0 0 0 0 0 0 254 176 903 591 10 850 905 13 468 t 0 0 0 0 0 0 0 0 0 0 0 233 384 35 129 43 97 32 34 289

AT5G43410_M0037_1.02_CISBP_rc_shift11 (AT5G43410:M0037_1.02:CISBP_rc) 0.725 0.544 2.816 0.892 0.896 908 559 678 738 688 714.200
; assembly_17 versus AT5G43410_M0037_1.02_CISBP_rc (AT5G43410:M0037_1.02:CISBP_rc); m=181/237; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 714.2; -----------rtGgCGGCk ; cor=0.725; Ncor=0.544; logoDP=2.816; NsEucl=0.892; NSW=0.896; rcor=908; rNcor=559; rlogoDP=678; rNsEucl=738; rNSW=688; rank_mean=714.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 29 20 4 15 2 3 2 1 8 c 0 0 0 0 0 0 0 0 0 0 0 23 24 2 13 93 2 4 95 16 g 0 0 0 0 0 0 0 0 0 0 0 25 18 90 59 1 85 91 1 47 t 0 0 0 0 0 0 0 0 0 0 0 23 38 4 13 4 10 3 3 29

Zm00001d049364_MA1833.1_JASPAR_rc_shift7 (Zm00001d049364:MA1833.1:JASPAR_rc) 0.739 0.508 2.935 0.899 0.887 819 692 651 626 784 714.400
; assembly_17 versus Zm00001d049364_MA1833.1_JASPAR_rc (Zm00001d049364:MA1833.1:JASPAR_rc); m=182/237; ncol2=16; w=-2; offset=-2; strand=R; shift=7; score= 714.4; -------ggyGGCGGCGGCg ; cor=0.739; Ncor=0.508; logoDP=2.935; NsEucl=0.899; NSW=0.887; rcor=819; rNcor=692; rlogoDP=651; rNsEucl=626; rNSW=784; rank_mean=714.400; match_rank= a 0 0 0 0 0 0 0 2459 3070 2162 624 544 559 516 441 525 510 424 681 2187 c 0 0 0 0 0 0 0 4550 4110 8879 1008 777 17121 612 593 17063 607 601 16187 2975 g 0 0 0 0 0 0 0 9497 9179 2765 16513 16869 321 17013 17272 366 17025 17229 1027 9771 t 0 0 0 0 0 0 0 2100 2247 4800 461 416 605 465 300 652 464 352 711 3673

EREB201_ZmCRF3_B73_1_m1_EEAD0339_EEADannot_shift6 (EREB201_ZmCRF3_B73_1_m1:EEAD0339:EEADannot) 0.710 0.521 5.054 0.895 0.878 1023 636 380 696 856 718.200
; assembly_17 versus EREB201_ZmCRF3_B73_1_m1_EEAD0339_EEADannot (EREB201_ZmCRF3_B73_1_m1:EEAD0339:EEADannot); m=183/237; ncol2=15; w=-3; offset=-3; strand=D; shift=6; score= 718.2; ------ssCGGCCGGCmGss ; cor=0.710; Ncor=0.521; logoDP=5.054; NsEucl=0.895; NSW=0.878; rcor=1023; rNcor=636; rlogoDP=380; rNsEucl=696; rNSW=856; rank_mean=718.200; match_rank= a 0 0 0 0 0 0 6 10 14 9 0 7 0 1 0 0 28 19 7 12 c 0 0 0 0 0 0 28 53 72 7 0 89 100 0 0 100 48 9 37 39 g 0 0 0 0 0 0 61 29 3 83 100 4 0 96 100 0 23 71 43 35 t 0 0 0 0 0 0 5 8 11 1 0 0 0 3 0 0 1 1 13 14

ERF112_MA1245.3_JASPAR_rc_shift9 (ERF112:MA1245.3:JASPAR_rc) 0.738 0.604 2.854 0.882 0.874 830 330 666 873 900 719.800
; assembly_17 versus ERF112_MA1245.3_JASPAR_rc (ERF112:MA1245.3:JASPAR_rc); m=184/237; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 719.8; ---------yGGCGGCGg-- ; cor=0.738; Ncor=0.604; logoDP=2.854; NsEucl=0.882; NSW=0.874; rcor=830; rNcor=330; rlogoDP=666; rNsEucl=873; rNSW=900; rank_mean=719.800; match_rank= a 0 0 0 0 0 0 0 0 0 327 48 28 37 7 3 49 48 410 0 0 c 0 0 0 0 0 0 0 0 0 1264 3 14 2236 1 37 2173 33 361 0 0 g 0 0 0 0 0 0 0 0 0 73 2406 2446 3 2449 2454 20 2246 1507 0 0 t 0 0 0 0 0 0 0 0 0 831 38 7 219 38 1 253 168 217 0 0

LBD13_MA2021.2_JASPAR_rc_shift11 (LBD13:MA2021.2:JASPAR_rc) 0.764 0.555 2.528 0.881 0.887 705 520 715 884 782 721.200
; assembly_17 versus LBD13_MA2021.2_JASPAR_rc (LBD13:MA2021.2:JASPAR_rc); m=185/237; ncol2=8; w=0; offset=2; strand=R; shift=11; score= 721.2; -----------aCGGTGGa- ; cor=0.764; Ncor=0.555; logoDP=2.528; NsEucl=0.881; NSW=0.887; rcor=705; rNcor=520; rlogoDP=715; rNsEucl=884; rNSW=782; rank_mean=721.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 628 18 8 9 72 17 39 635 0 c 0 0 0 0 0 0 0 0 0 0 0 143 980 16 8 168 4 20 145 0 g 0 0 0 0 0 0 0 0 0 0 0 227 11 1021 1031 6 1018 979 44 0 t 0 0 0 0 0 0 0 0 0 0 0 57 46 10 7 809 16 17 231 0

ERF082_MA1005.3_JASPAR_rc_shift9 (ERF082:MA1005.3:JASPAR_rc) 0.737 0.603 2.952 0.881 0.872 834 334 648 888 920 724.800
; assembly_17 versus ERF082_MA1005.3_JASPAR_rc (ERF082:MA1005.3:JASPAR_rc); m=186/237; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 724.8; ---------yGGCGGCGg-- ; cor=0.737; Ncor=0.603; logoDP=2.952; NsEucl=0.881; NSW=0.872; rcor=834; rNcor=334; rlogoDP=648; rNsEucl=888; rNSW=920; rank_mean=724.800; match_rank= a 0 0 0 0 0 0 0 0 0 252 18 22 35 8 2 31 41 319 0 0 c 0 0 0 0 0 0 0 0 0 925 1 7 1697 1 3 1658 16 257 0 0 g 0 0 0 0 0 0 0 0 0 48 1852 1852 2 1844 1878 8 1713 1145 0 0 t 0 0 0 0 0 0 0 0 0 658 12 2 149 30 0 186 113 162 0 0

ATERF1_ATERF1_2_ArabidopsisPBM_rc_shift8 (ATERF1:ATERF1_2:ArabidopsisPBM_rc) 0.725 0.544 3.916 0.886 0.883 906 554 523 827 823 726.600
; assembly_17 versus ATERF1_ATERF1_2_ArabidopsisPBM_rc (ATERF1:ATERF1_2:ArabidopsisPBM_rc); m=187/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 726.6; --------ytGCCGGCar-- ; cor=0.725; Ncor=0.544; logoDP=3.916; NsEucl=0.886; NSW=0.883; rcor=906; rNcor=554; rlogoDP=523; rNsEucl=827; rNSW=823; rank_mean=726.600; match_rank= a 0 0 0 0 0 0 0 0 16 14 4 3 1 4 1 1 59 29 0 0 c 0 0 0 0 0 0 0 0 29 15 0 90 95 0 6 94 12 24 0 0 g 0 0 0 0 0 0 0 0 20 12 94 6 1 95 90 1 15 33 0 0 t 0 0 0 0 0 0 0 0 35 59 2 1 3 1 3 4 14 14 0 0

DEAR3_DEAR3_ArabidopsisPBM_rc_shift11 (DEAR3:DEAR3:ArabidopsisPBM_rc) 0.720 0.540 2.465 0.893 0.896 945 569 721 736 687 731.600
; assembly_17 versus DEAR3_DEAR3_ArabidopsisPBM_rc (DEAR3:DEAR3:ArabidopsisPBM_rc); m=188/237; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 731.6; -----------wsGkCGGyG ; cor=0.720; Ncor=0.540; logoDP=2.465; NsEucl=0.893; NSW=0.896; rcor=945; rNcor=569; rlogoDP=721; rNsEucl=736; rNSW=687; rank_mean=731.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 30 15 3 10 3 1 2 2 4 c 0 0 0 0 0 0 0 0 0 0 0 15 33 7 6 86 2 6 64 2 g 0 0 0 0 0 0 0 0 0 0 0 23 42 83 52 4 93 89 1 79 t 0 0 0 0 0 0 0 0 0 0 0 32 10 7 32 7 4 3 33 15

LBD19_IG1_AS2_Mo17_1_EEAD0422_EEADannot_rc_shift4 (LBD19_IG1_AS2_Mo17_1:EEAD0422:EEADannot_rc) 0.737 0.461 3.663 0.896 0.891 832 852 562 680 745 734.200
; assembly_17 versus LBD19_IG1_AS2_Mo17_1_EEAD0422_EEADannot_rc (LBD19_IG1_AS2_Mo17_1:EEAD0422:EEADannot_rc); m=189/237; ncol2=15; w=-5; offset=-5; strand=R; shift=4; score= 734.2; ----GGCGGCGGCGGCGGc- ; cor=0.737; Ncor=0.461; logoDP=3.663; NsEucl=0.896; NSW=0.891; rcor=832; rNcor=852; rlogoDP=562; rNsEucl=680; rNSW=745; rank_mean=734.200; match_rank= a 0 0 0 0 4 3 6 0 7 15 6 7 17 3 11 12 1 4 17 0 c 0 0 0 0 10 10 94 0 7 72 4 4 74 1 6 80 0 6 63 0 g 0 0 0 0 79 87 0 100 82 5 86 86 4 93 80 2 99 88 15 0 t 0 0 0 0 7 0 0 0 4 8 4 3 5 3 3 6 0 2 5 0

Zm00001d024324_MA1820.2_JASPAR_rc_shift11 (Zm00001d024324:MA1820.2:JASPAR_rc) 0.756 0.619 0.763 0.882 0.874 736 277 896 878 904 738.200
; assembly_17 versus Zm00001d024324_MA1820.2_JASPAR_rc (Zm00001d024324:MA1820.2:JASPAR_rc); m=190/237; ncol2=9; w=0; offset=2; strand=R; shift=11; score= 738.2; -----------GCGGCGGCG ; cor=0.756; Ncor=0.619; logoDP=0.763; NsEucl=0.882; NSW=0.874; rcor=736; rNcor=277; rlogoDP=896; rNsEucl=878; rNSW=904; rank_mean=738.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 949 761 623 792 609 593 627 714 676 c 0 0 0 0 0 0 0 0 0 0 0 1113 20848 864 1100 21141 695 934 20748 959 g 0 0 0 0 0 0 0 0 0 0 0 19965 425 20733 20319 350 20957 20683 627 20536 t 0 0 0 0 0 0 0 0 0 0 0 692 685 499 508 619 474 475 630 548

RRTF1_RRTF1_2_ArabidopsisPBM_rc_shift8 (RRTF1:RRTF1_2:ArabidopsisPBM_rc) 0.743 0.557 3.360 0.882 0.874 804 512 597 876 903 738.400
; assembly_17 versus RRTF1_RRTF1_2_ArabidopsisPBM_rc (RRTF1:RRTF1_2:ArabidopsisPBM_rc); m=191/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 738.4; --------wTkGCGGCGs-- ; cor=0.743; Ncor=0.557; logoDP=3.360; NsEucl=0.882; NSW=0.874; rcor=804; rNcor=512; rlogoDP=597; rNsEucl=876; rNSW=903; rank_mean=738.400; match_rank= a 0 0 0 0 0 0 0 0 48 5 1 5 1 0 0 0 1 4 0 0 c 0 0 0 0 0 0 0 0 8 3 1 2 98 1 3 99 2 43 0 0 g 0 0 0 0 0 0 0 0 17 2 54 91 1 98 97 1 87 46 0 0 t 0 0 0 0 0 0 0 0 27 90 44 2 0 1 0 0 10 7 0 0

Zm00001d049364_MA1833.2_JASPAR_rc_shift10 (Zm00001d049364:MA1833.2:JASPAR_rc) 0.741 0.618 0.377 0.890 0.878 808 282 967 779 858 738.800
; assembly_17 versus Zm00001d049364_MA1833.2_JASPAR_rc (Zm00001d049364:MA1833.2:JASPAR_rc); m=192/237; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 738.8; ----------GGCGGCGGCg ; cor=0.741; Ncor=0.618; logoDP=0.377; NsEucl=0.890; NSW=0.878; rcor=808; rNcor=282; rlogoDP=967; rNsEucl=779; rNSW=858; rank_mean=738.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 624 544 559 516 441 525 510 424 681 2187 c 0 0 0 0 0 0 0 0 0 0 1008 777 17121 612 593 17063 607 601 16187 2975 g 0 0 0 0 0 0 0 0 0 0 16513 16869 321 17013 17272 366 17025 17229 1027 9771 t 0 0 0 0 0 0 0 0 0 0 461 416 605 465 300 652 464 352 711 3673

CRF4.DAP_M0131_AthalianaCistrome_rc_shift0 (CRF4.DAP:M0131:AthalianaCistrome_rc) 0.767 0.402 0.620 0.907 0.905 687 1078 916 455 596 746.400
; assembly_17 versus CRF4.DAP_M0131_AthalianaCistrome_rc (CRF4.DAP:M0131:AthalianaCistrome_rc); m=193/237; ncol2=21; w=-9; offset=-9; strand=R; shift=0; score= 746.4; cgGmgghgGyGGCGGCGGmg ; cor=0.767; Ncor=0.402; logoDP=0.620; NsEucl=0.907; NSW=0.905; rcor=687; rNcor=1078; rlogoDP=916; rNsEucl=455; rNSW=596; rank_mean=746.400; match_rank= a 51 46 26 65 39 47 62 44 45 24 3 36 6 0 0 24 7 8 92 34 c 91 22 25 95 24 17 88 26 9 105 0 0 208 0 0 174 0 22 77 0 g 34 144 162 18 107 127 10 125 159 10 207 190 0 226 226 2 207 185 13 144 t 50 14 13 48 56 35 66 31 13 87 16 0 12 0 0 26 12 11 44 48

ERF076_MA1001.4_JASPAR_rc_shift8 (ERF076:MA1001.4:JASPAR_rc) 0.729 0.547 3.797 0.881 0.873 884 544 548 881 914 754.200
; assembly_17 versus ERF076_MA1001.4_JASPAR_rc (ERF076:MA1001.4:JASPAR_rc); m=194/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 754.2; --------GyGGCGGCGg-- ; cor=0.729; Ncor=0.547; logoDP=3.797; NsEucl=0.881; NSW=0.873; rcor=884; rNcor=544; rlogoDP=548; rNsEucl=881; rNSW=914; rank_mean=754.200; match_rank= a 0 0 0 0 0 0 0 0 157 81 18 74 24 6 9 38 109 224 0 0 c 0 0 0 0 0 0 0 0 45 435 11 9 1271 5 13 1270 63 181 0 0 g 0 0 0 0 0 0 0 0 1086 5 1304 1281 2 1346 1347 6 1008 830 0 0 t 0 0 0 0 0 0 0 0 85 852 40 9 76 16 4 59 193 138 0 0

ERF057_MA1753.2_JASPAR_rc_shift10 (ERF057:MA1753.2:JASPAR_rc) 0.755 0.503 0.366 0.897 0.894 747 706 972 648 700 754.600
; assembly_17 versus ERF057_MA1753.2_JASPAR_rc (ERF057:MA1753.2:JASPAR_rc); m=195/237; ncol2=14; w=0; offset=1; strand=R; shift=10; score= 754.6; ----------GGCGGyGGhG ; cor=0.755; Ncor=0.503; logoDP=0.366; NsEucl=0.897; NSW=0.894; rcor=747; rNcor=706; rlogoDP=972; rNsEucl=648; rNSW=700; rank_mean=754.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 92 171 33 0 0 10 3 59 337 93 c 0 0 0 0 0 0 0 0 0 0 0 12 874 0 0 578 12 45 389 31 g 0 0 0 0 0 0 0 0 0 0 856 694 3 1000 995 2 983 862 3 803 t 0 0 0 0 0 0 0 0 0 0 52 123 90 0 5 410 2 35 270 73

ERF2_M0038_1.02_CISBP_rc_shift12 (ERF2:M0038_1.02:CISBP_rc) 0.761 0.468 0.147 0.896 0.914 715 832 1077 667 485 755.200
; assembly_17 versus ERF2_M0038_1.02_CISBP_rc (ERF2:M0038_1.02:CISBP_rc); m=196/237; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 755.2; ------------tGgCGGCk ; cor=0.761; Ncor=0.468; logoDP=0.147; NsEucl=0.896; NSW=0.914; rcor=715; rNcor=832; rlogoDP=1077; rNsEucl=667; rNSW=485; rank_mean=755.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 22 11 21 4 9 7 6 15 c 0 0 0 0 0 0 0 0 0 0 0 0 22 9 15 78 4 14 72 24 g 0 0 0 0 0 0 0 0 0 0 0 0 22 68 46 2 70 69 8 32 t 0 0 0 0 0 0 0 0 0 0 0 0 34 12 18 16 17 10 14 29

CRF4_MA0976.3_JASPAR_rc_shift8 (CRF4:MA0976.3:JASPAR_rc) 0.729 0.546 3.748 0.881 0.874 888 548 555 879 907 755.400
; assembly_17 versus CRF4_MA0976.3_JASPAR_rc (CRF4:MA0976.3:JASPAR_rc); m=197/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 755.4; --------GyGGCGGCGg-- ; cor=0.729; Ncor=0.546; logoDP=3.748; NsEucl=0.881; NSW=0.874; rcor=888; rNcor=548; rlogoDP=555; rNsEucl=879; rNSW=907; rank_mean=755.400; match_rank= a 0 0 0 0 0 0 0 0 134 131 25 87 51 9 9 63 163 321 0 0 c 0 0 0 0 0 0 0 0 40 653 16 9 1734 15 22 1744 111 247 0 0 g 0 0 0 0 0 0 0 0 1659 12 1804 1794 2 1866 1865 4 1377 1167 0 0 t 0 0 0 0 0 0 0 0 67 1104 55 10 113 10 4 89 249 165 0 0

LBD4_M1274_1.02_CISBP_shift8 (LBD4:M1274_1.02:CISBP) 0.714 0.535 1.198 0.893 0.897 986 584 822 729 678 759.800
; assembly_17 versus LBD4_M1274_1.02_CISBP (LBD4:M1274_1.02:CISBP); m=198/237; ncol2=10; w=-1; offset=-1; strand=D; shift=8; score= 759.8; --------rahsCGgsrr-- ; cor=0.714; Ncor=0.535; logoDP=1.198; NsEucl=0.893; NSW=0.897; rcor=986; rNcor=584; rlogoDP=822; rNsEucl=729; rNSW=678; rank_mean=759.800; match_rank= a 0 0 0 0 0 0 0 0 39 47 25 20 7 6 9 21 28 30 0 0 c 0 0 0 0 0 0 0 0 20 11 35 36 76 14 23 30 18 18 0 0 g 0 0 0 0 0 0 0 0 29 24 14 37 15 78 64 36 36 30 0 0 t 0 0 0 0 0 0 0 0 12 18 26 7 2 2 4 13 18 22 0 0

EREB87_B73_1_m1_EEAD0357_EEADannot_shift9 (EREB87_B73_1_m1:EEAD0357:EEADannot) 0.709 0.520 4.828 0.889 0.865 1032 639 417 786 967 768.200
; assembly_17 versus EREB87_B73_1_m1_EEAD0357_EEADannot (EREB87_B73_1_m1:EEAD0357:EEADannot); m=199/237; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 768.2; ---------cGGCGGCGGCG ; cor=0.709; Ncor=0.520; logoDP=4.828; NsEucl=0.889; NSW=0.865; rcor=1032; rNcor=639; rlogoDP=417; rNsEucl=786; rNSW=967; rank_mean=768.200; match_rank= a 0 0 0 0 0 0 0 0 0 10 4 8 5 2 4 3 0 4 6 3 c 0 0 0 0 0 0 0 0 0 57 0 6 86 1 3 89 1 12 84 0 g 0 0 0 0 0 0 0 0 0 13 93 86 1 96 91 0 98 84 2 97 t 0 0 0 0 0 0 0 0 0 20 3 0 8 1 2 8 1 0 8 0

EREB183_ZmPUCHI_B73_1_m1_EEAD0337_EEADannot_rc_shift11 (EREB183_ZmPUCHI_B73_1_m1:EEAD0337:EEADannot_rc) 0.784 0.415 0.768 0.894 0.900 590 1019 894 708 654 773.000
; assembly_17 versus EREB183_ZmPUCHI_B73_1_m1_EEAD0337_EEADannot_rc (EREB183_ZmPUCHI_B73_1_m1:EEAD0337:EEADannot_rc); m=200/237; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 773; -----------GCGGCGGCG ; cor=0.784; Ncor=0.415; logoDP=0.768; NsEucl=0.894; NSW=0.900; rcor=590; rNcor=1019; rlogoDP=894; rNsEucl=708; rNSW=654; rank_mean=773.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 17 2 2 4 2 2 9 5 5 c 0 0 0 0 0 0 0 0 0 0 0 5 88 4 1 92 2 8 76 1 g 0 0 0 0 0 0 0 0 0 0 0 70 4 92 92 0 94 77 7 92 t 0 0 0 0 0 0 0 0 0 0 0 8 6 2 3 6 2 6 12 2

ERF104_MA1239.1_JASPAR_rc_shift7 (ERF104:MA1239.1:JASPAR_rc) 0.743 0.430 0.937 0.902 0.895 802 955 868 554 697 775.200
; assembly_17 versus ERF104_MA1239.1_JASPAR_rc (ERF104:MA1239.1:JASPAR_rc); m=201/237; ncol2=19; w=-2; offset=-2; strand=R; shift=7; score= 775.2; -------rryGGCGGCGgmg ; cor=0.743; Ncor=0.430; logoDP=0.937; NsEucl=0.902; NSW=0.895; rcor=802; rNcor=955; rlogoDP=868; rNsEucl=554; rNSW=697; rank_mean=775.200; match_rank= a 0 0 0 0 0 0 0 149 192 62 0 89 3 0 0 25 5 90 169 75 c 0 0 0 0 0 0 0 60 51 281 0 0 527 0 2 496 6 76 213 33 g 0 0 0 0 0 0 0 218 274 0 553 466 0 557 555 0 464 369 50 363 t 0 0 0 0 0 0 0 130 40 214 4 2 27 0 0 36 82 22 125 86

ERF054_MA1232.2_JASPAR_shift10 (ERF054:MA1232.2:JASPAR) 0.722 0.525 4.588 0.872 0.868 927 616 442 965 948 779.600
; assembly_17 versus ERF054_MA1232.2_JASPAR (ERF054:MA1232.2:JASPAR); m=202/237; ncol2=8; w=0; offset=1; strand=D; shift=10; score= 779.6; ----------GdCGGyGg-- ; cor=0.722; Ncor=0.525; logoDP=4.588; NsEucl=0.872; NSW=0.868; rcor=927; rNcor=616; rlogoDP=442; rNsEucl=965; rNSW=948; rank_mean=779.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 11 153 1 0 0 0 23 77 0 0 c 0 0 0 0 0 0 0 0 0 0 3 21 564 0 2 213 12 96 0 0 g 0 0 0 0 0 0 0 0 0 0 546 199 0 567 565 0 484 374 0 0 t 0 0 0 0 0 0 0 0 0 0 7 194 2 0 0 354 48 20 0 0

EREB138_B73_1_m1_EEAD0331_EEADannot_rc_shift8 (EREB138_B73_1_m1:EEAD0331:EEADannot_rc) 0.715 0.524 0.687 0.899 0.887 978 623 905 625 780 782.200
; assembly_17 versus EREB138_B73_1_m1_EEAD0331_EEADannot_rc (EREB138_B73_1_m1:EEAD0331:EEADannot_rc); m=203/237; ncol2=15; w=-1; offset=-1; strand=R; shift=8; score= 782.2; --------rcGgCGGCGGCG ; cor=0.715; Ncor=0.524; logoDP=0.687; NsEucl=0.899; NSW=0.887; rcor=978; rNcor=623; rlogoDP=905; rNsEucl=625; rNSW=780; rank_mean=782.200; match_rank= a 0 0 0 0 0 0 0 0 30 14 6 21 8 3 17 4 1 16 0 7 c 0 0 0 0 0 0 0 0 8 62 10 9 71 0 2 88 0 3 90 1 g 0 0 0 0 0 0 0 0 44 12 77 60 2 97 78 0 97 78 2 91 t 0 0 0 0 0 0 0 0 18 12 7 10 19 0 3 8 2 3 8 1

RRTF1_RRTF1_ArabidopsisPBM_rc_shift9 (RRTF1:RRTF1:ArabidopsisPBM_rc) 0.701 0.638 0.908 0.887 0.872 1082 222 873 819 925 784.200
; assembly_17 versus RRTF1_RRTF1_ArabidopsisPBM_rc (RRTF1:RRTF1:ArabidopsisPBM_rc); m=204/237; ncol2=10; w=0; offset=0; strand=R; shift=9; score= 784.2; ---------TGGCGGCGsc- ; cor=0.701; Ncor=0.638; logoDP=0.908; NsEucl=0.887; NSW=0.872; rcor=1082; rNcor=222; rlogoDP=873; rNsEucl=819; rNSW=925; rank_mean=784.200; match_rank= a 0 0 0 0 0 0 0 0 0 8 2 9 0 0 0 0 0 1 15 0 c 0 0 0 0 0 0 0 0 0 21 0 1 99 1 17 99 1 66 46 0 g 0 0 0 0 0 0 0 0 0 2 77 86 1 98 83 1 94 29 15 0 t 0 0 0 0 0 0 0 0 0 69 21 4 0 1 0 0 5 4 24 0

EREB2_Mo17_1_EEAD0346_EEADannot_rc_shift10 (EREB2_Mo17_1:EEAD0346:EEADannot_rc) 0.737 0.461 2.981 0.891 0.881 835 853 641 762 837 785.600
; assembly_17 versus EREB2_Mo17_1_EEAD0346_EEADannot_rc (EREB2_Mo17_1:EEAD0346:EEADannot_rc); m=205/237; ncol2=15; w=0; offset=1; strand=R; shift=10; score= 785.6; ----------GrCGGCGGCG ; cor=0.737; Ncor=0.461; logoDP=2.981; NsEucl=0.891; NSW=0.881; rcor=835; rNcor=853; rlogoDP=641; rNsEucl=762; rNSW=837; rank_mean=785.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 4 25 13 3 7 1 0 8 6 3 c 0 0 0 0 0 0 0 0 0 0 10 8 71 0 0 95 1 4 86 0 g 0 0 0 0 0 0 0 0 0 0 79 60 2 97 89 0 97 85 0 96 t 0 0 0 0 0 0 0 0 0 0 7 7 14 0 4 4 2 3 8 1

HRD_M0019_1.02_CISBP_rc_shift12 (HRD:M0019_1.02:CISBP_rc) 0.723 0.482 1.384 0.889 0.901 920 774 799 798 640 786.200
; assembly_17 versus HRD_M0019_1.02_CISBP_rc (HRD:M0019_1.02:CISBP_rc); m=206/237; ncol2=9; w=0; offset=3; strand=R; shift=12; score= 786.2; ------------tGtCGGya ; cor=0.723; Ncor=0.482; logoDP=1.384; NsEucl=0.889; NSW=0.901; rcor=920; rNcor=774; rlogoDP=799; rNsEucl=798; rNSW=640; rank_mean=786.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 20 10 15 3 3 9 8 41 c 0 0 0 0 0 0 0 0 0 0 0 0 22 10 8 90 5 2 57 19 g 0 0 0 0 0 0 0 0 0 0 0 0 16 71 23 3 88 89 4 23 t 0 0 0 0 0 0 0 0 0 0 0 0 42 9 54 4 4 0 31 17

IG1_MA2418.1_JASPAR_rc_shift12 (IG1:MA2418.1:JASPAR_rc) 0.755 0.503 2.495 0.877 0.878 748 707 718 922 855 790.000
; assembly_17 versus IG1_MA2418.1_JASPAR_rc (IG1:MA2418.1:JASPAR_rc); m=207/237; ncol2=9; w=0; offset=3; strand=R; shift=12; score= 790; ------------TGGCGGCa ; cor=0.755; Ncor=0.503; logoDP=2.495; NsEucl=0.877; NSW=0.878; rcor=748; rNcor=707; rlogoDP=718; rNsEucl=922; rNSW=855; rank_mean=790.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 274 103 110 151 194 106 142 5426 c 0 0 0 0 0 0 0 0 0 0 0 0 1478 218 188 7736 237 293 7717 663 g 0 0 0 0 0 0 0 0 0 0 0 0 443 7732 7805 114 7586 7665 217 1865 t 0 0 0 0 0 0 0 0 0 0 0 0 5972 114 64 166 150 103 91 213

GEBP_UN0399.1_JASPAR_rc_shift11 (GEBP:UN0399.1:JASPAR_rc) 0.722 0.525 4.618 0.868 0.861 930 619 435 977 995 791.200
; assembly_17 versus GEBP_UN0399.1_JASPAR_rc (GEBP:UN0399.1:JASPAR_rc); m=208/237; ncol2=8; w=0; offset=2; strand=R; shift=11; score= 791.2; -----------cCGGCCGc- ; cor=0.722; Ncor=0.525; logoDP=4.618; NsEucl=0.868; NSW=0.861; rcor=930; rNcor=619; rlogoDP=435; rNsEucl=977; rNSW=995; rank_mean=791.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 240 135 25 0.25 50 0.25 0.27 214 0 c 0 0 0 0 0 0 0 0 0 0 0 560 810 0.25 0.25 949 999 0.27 607 0 g 0 0 0 0 0 0 0 0 0 0 0 40 0.27 974 999 0.25 0.25 972 36.02 0 t 0 0 0 0 0 0 0 0 0 0 0 160 54 0.25 0.25 0.25 0.25 27 143.01 0

AT5G18450_MA1226.1_JASPAR_shift4 (AT5G18450:MA1226.1:JASPAR) 0.707 0.442 5.000 0.890 0.878 1041 919 387 780 862 797.800
; assembly_17 versus AT5G18450_MA1226.1_JASPAR (AT5G18450:MA1226.1:JASPAR); m=209/237; ncol2=15; w=-5; offset=-5; strand=D; shift=4; score= 797.8; ----ggyggarGCGGYGGm- ; cor=0.707; Ncor=0.442; logoDP=5.000; NsEucl=0.890; NSW=0.878; rcor=1041; rNcor=919; rlogoDP=387; rNsEucl=780; rNSW=862; rank_mean=797.800; match_rank= a 0 0 0 0 95 88 137 84 98 304 185 34 21 0 0 25 0 54 237 0 c 0 0 0 0 41 54 179 49 42 133 0 0 509 0 0 156 0 38 156 0 g 0 0 0 0 357 371 58 312 386 12 395 531 0 587 587 0 584 491 50 0 t 0 0 0 0 94 74 213 142 61 138 7 22 57 0 0 406 3 4 144 0

CRF2_M0029_1.02_CISBP_rc_shift10 (CRF2:M0029_1.02:CISBP_rc) 0.759 0.552 0.485 0.876 0.878 722 530 946 927 864 797.800
; assembly_17 versus CRF2_M0029_1.02_CISBP_rc (CRF2:M0029_1.02:CISBP_rc); m=210/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 797.8; ----------GGCGGCGs-- ; cor=0.759; Ncor=0.552; logoDP=0.485; NsEucl=0.876; NSW=0.878; rcor=722; rNcor=530; rlogoDP=946; rNsEucl=927; rNSW=864; rank_mean=797.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 3 13 0 0 c 0 0 0 0 0 0 0 0 0 0 6 0 100 0 2 100 8 35 0 0 g 0 0 0 0 0 0 0 0 0 0 73 93 0 100 98 0 78 48 0 0 t 0 0 0 0 0 0 0 0 0 0 12 2 0 0 0 0 11 4 0 0

CRF2_MA0975.1_JASPAR_rc_shift10 (CRF2:MA0975.1:JASPAR_rc) 0.758 0.551 0.494 0.876 0.877 726 531 945 931 871 800.800
; assembly_17 versus CRF2_MA0975.1_JASPAR_rc (CRF2:MA0975.1:JASPAR_rc); m=211/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 800.8; ----------GGCGGCGs-- ; cor=0.758; Ncor=0.551; logoDP=0.494; NsEucl=0.876; NSW=0.877; rcor=726; rNcor=531; rlogoDP=945; rNsEucl=931; rNSW=871; rank_mean=800.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 88 46 0 0 0 0 27 131 0 0 c 0 0 0 0 0 0 0 0 0 0 59 0 999 0 23 999 81 348 0 0 g 0 0 0 0 0 0 0 0 0 0 735 931 0 999 977 0 783 478 0 0 t 0 0 0 0 0 0 0 0 0 0 118 23 0 0 0 0 108 44 0 0

AT4G00270_M1620_1.02_CISBP_shift11 (AT4G00270:M1620_1.02:CISBP) 0.721 0.524 4.339 0.868 0.861 941 624 466 978 999 801.600
; assembly_17 versus AT4G00270_M1620_1.02_CISBP (AT4G00270:M1620_1.02:CISBP); m=212/237; ncol2=8; w=0; offset=2; strand=D; shift=11; score= 801.6; -----------cCGGCCGc- ; cor=0.721; Ncor=0.524; logoDP=4.339; NsEucl=0.868; NSW=0.861; rcor=941; rNcor=624; rlogoDP=466; rNsEucl=978; rNSW=999; rank_mean=801.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 24 14 3 0 5 0 0 21 0 c 0 0 0 0 0 0 0 0 0 0 0 56 81 0 0 95 100 0 61 0 g 0 0 0 0 0 0 0 0 0 0 0 4 0 97 100 0 0 97 4 0 t 0 0 0 0 0 0 0 0 0 0 0 16 5 0 0 0 0 3 14 0

EREB145_ZmSHINE_B73_1_m1_EEAD0333_EEADannot_rc_shift11 (EREB145_ZmSHINE_B73_1_m1:EEAD0333:EEADannot_rc) 0.751 0.451 4.193 0.877 0.865 767 888 485 908 971 803.800
; assembly_17 versus EREB145_ZmSHINE_B73_1_m1_EEAD0333_EEADannot_rc (EREB145_ZmSHINE_B73_1_m1:EEAD0333:EEADannot_rc); m=213/237; ncol2=13; w=0; offset=2; strand=R; shift=11; score= 803.8; -----------GCGGCGGCG ; cor=0.751; Ncor=0.451; logoDP=4.193; NsEucl=0.877; NSW=0.865; rcor=767; rNcor=888; rlogoDP=485; rNsEucl=908; rNSW=971; rank_mean=803.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 2 0 1 3 0 4 6 2 c 0 0 0 0 0 0 0 0 0 0 0 0 90 0 1 83 0 3 87 1 g 0 0 0 0 0 0 0 0 0 0 0 92 1 99 96 0 100 92 1 96 t 0 0 0 0 0 0 0 0 0 0 0 2 7 1 2 14 0 1 6 1

JUB1_MA2017.2_JASPAR_shift11 (JUB1:MA2017.2:JASPAR) 0.747 0.475 4.683 0.860 0.864 786 801 430 1026 982 805.000
; assembly_17 versus JUB1_MA2017.2_JASPAR (JUB1:MA2017.2:JASPAR); m=214/237; ncol2=7; w=0; offset=2; strand=D; shift=11; score= 805; -----------ACGGCGa-- ; cor=0.747; Ncor=0.475; logoDP=4.683; NsEucl=0.860; NSW=0.864; rcor=786; rNcor=801; rlogoDP=430; rNsEucl=1026; rNSW=982; rank_mean=805.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 458 9 9 3 12 33 288 0 0 c 0 0 0 0 0 0 0 0 0 0 0 30 492 8 12 476 10 36 0 0 g 0 0 0 0 0 0 0 0 0 0 0 10 0 489 492 0 457 82 0 0 t 0 0 0 0 0 0 0 0 0 0 0 11 8 3 2 21 9 103 0 0

ERF15_MA1231.1_JASPAR_rc_shift8 (ERF15:MA1231.1:JASPAR_rc) 0.717 0.526 0.279 0.898 0.885 965 610 1020 642 808 809.000
; assembly_17 versus ERF15_MA1231.1_JASPAR_rc (ERF15:MA1231.1:JASPAR_rc); m=215/237; ncol2=15; w=-1; offset=-1; strand=R; shift=8; score= 809; --------ryGGCGGCKghg ; cor=0.717; Ncor=0.526; logoDP=0.279; NsEucl=0.898; NSW=0.885; rcor=965; rNcor=610; rlogoDP=1020; rNsEucl=642; rNSW=808; rank_mean=809.000; match_rank= a 0 0 0 0 0 0 0 0 205 66 1 26 5 0 0 11 0 134 198 140 c 0 0 0 0 0 0 0 0 33 322 0 0 575 0 0 550 8 69 172 9 g 0 0 0 0 0 0 0 0 332 0 593 570 0 572 596 0 432 369 45 335 t 0 0 0 0 0 0 0 0 26 208 2 0 16 24 0 35 156 24 181 112

RRTF1_RRTF1_3_ArabidopsisPBM_rc_shift8 (RRTF1:RRTF1_3:ArabidopsisPBM_rc) 0.716 0.537 3.493 0.876 0.863 971 580 582 924 990 809.400
; assembly_17 versus RRTF1_RRTF1_3_ArabidopsisPBM_rc (RRTF1:RRTF1_3:ArabidopsisPBM_rc); m=216/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 809.4; --------aTGGCGGCGs-- ; cor=0.716; Ncor=0.537; logoDP=3.493; NsEucl=0.876; NSW=0.863; rcor=971; rNcor=580; rlogoDP=582; rNsEucl=924; rNSW=990; rank_mean=809.400; match_rank= a 0 0 0 0 0 0 0 0 67 7 6 11 0 1 0 1 1 4 0 0 c 0 0 0 0 0 0 0 0 3 8 0 1 98 0 3 99 2 60 0 0 g 0 0 0 0 0 0 0 0 8 4 77 81 1 97 97 0 92 30 0 0 t 0 0 0 0 0 0 0 0 22 81 17 7 1 2 0 0 5 6 0 0

CRF4_MA0976.1_JASPAR_rc_shift10 (CRF4:MA0976.1:JASPAR_rc) 0.748 0.544 0.522 0.876 0.877 776 551 942 932 873 814.800
; assembly_17 versus CRF4_MA0976.1_JASPAR_rc (CRF4:MA0976.1:JASPAR_rc); m=217/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 814.8; ----------GGCGGCGs-- ; cor=0.748; Ncor=0.544; logoDP=0.522; NsEucl=0.876; NSW=0.877; rcor=776; rNcor=551; rlogoDP=942; rNsEucl=932; rNSW=873; rank_mean=814.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 49 108 0 0 0 0 62 70 0 0 c 0 0 0 0 0 0 0 0 0 0 65 68 987 0 25 1000 62 535 0 0 g 0 0 0 0 0 0 0 0 0 0 790 756 13 1000 974 0 769 326 0 0 t 0 0 0 0 0 0 0 0 0 0 97 68 0 0 0 0 108 70 0 0

CRF4_M0033_1.02_CISBP_rc_shift10 (CRF4:M0033_1.02:CISBP_rc) 0.748 0.544 0.522 0.876 0.876 780 557 943 935 876 818.200
; assembly_17 versus CRF4_M0033_1.02_CISBP_rc (CRF4:M0033_1.02:CISBP_rc); m=218/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 818.2; ----------GGCGGCGs-- ; cor=0.748; Ncor=0.544; logoDP=0.522; NsEucl=0.876; NSW=0.876; rcor=780; rNcor=557; rlogoDP=943; rNsEucl=935; rNSW=876; rank_mean=818.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 6 7 0 0 c 0 0 0 0 0 0 0 0 0 0 6 6 99 0 3 100 6 53 0 0 g 0 0 0 0 0 0 0 0 0 0 79 76 1 100 97 0 77 33 0 0 t 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 11 7 0 0

AT3G23230_M0024_1.02_CISBP_rc_shift10 (AT3G23230:M0024_1.02:CISBP_rc) 0.724 0.526 0.290 0.884 0.893 914 609 1006 842 724 819.000
; assembly_17 versus AT3G23230_M0024_1.02_CISBP_rc (AT3G23230:M0024_1.02:CISBP_rc); m=219/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 819; ----------GgCGGCks-- ; cor=0.724; Ncor=0.526; logoDP=0.290; NsEucl=0.884; NSW=0.893; rcor=914; rNcor=609; rlogoDP=1006; rNsEucl=842; rNSW=724; rank_mean=819.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 10 19 1 7 6 4 17 20 0 0 c 0 0 0 0 0 0 0 0 0 0 10 17 76 1 16 80 22 27 0 0 g 0 0 0 0 0 0 0 0 0 0 68 45 4 77 75 6 36 32 0 0 t 0 0 0 0 0 0 0 0 0 0 12 19 19 15 3 10 25 21 0 0

DREB2D_MA1250.2_JASPAR_rc_shift10 (DREB2D:MA1250.2:JASPAR_rc) 0.734 0.489 0.279 0.895 0.889 860 757 1019 700 769 821.000
; assembly_17 versus DREB2D_MA1250.2_JASPAR_rc (DREB2D:MA1250.2:JASPAR_rc); m=220/237; ncol2=14; w=0; offset=1; strand=R; shift=10; score= 821; ----------GgCGGYGGmg ; cor=0.734; Ncor=0.489; logoDP=0.279; NsEucl=0.895; NSW=0.889; rcor=860; rNcor=757; rlogoDP=1019; rNsEucl=700; rNSW=769; rank_mean=821.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 133 107 6 0 2 1 0 31 221 93 c 0 0 0 0 0 0 0 0 0 0 8 10 519 0 1 160 0 18 205 30 g 0 0 0 0 0 0 0 0 0 0 395 366 0 556 554 0 551 489 13 360 t 0 0 0 0 0 0 0 0 0 0 21 74 32 1 0 396 6 19 118 74

ERF098_MA0999.1_JASPAR_rc_shift10 (ERF098:MA0999.1:JASPAR_rc) 0.722 0.525 0.294 0.884 0.892 929 618 1004 844 733 825.600
; assembly_17 versus ERF098_MA0999.1_JASPAR_rc (ERF098:MA0999.1:JASPAR_rc); m=221/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 825.6; ----------ggCGGCgs-- ; cor=0.722; Ncor=0.525; logoDP=0.294; NsEucl=0.884; NSW=0.892; rcor=929; rNcor=618; rlogoDP=1004; rNsEucl=844; rNSW=733; rank_mean=825.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 98 192 13 70 62 37 173 198 0 0 c 0 0 0 0 0 0 0 0 0 0 99 170 756 10 166 804 222 270 0 0 g 0 0 0 0 0 0 0 0 0 0 677 448 39 769 746 63 356 317 0 0 t 0 0 0 0 0 0 0 0 0 0 125 190 192 151 26 96 248 215 0 0

EREB183_ZmPUCHI_Mo17_1_EEAD0338_EEADannot_rc_shift11 (EREB183_ZmPUCHI_Mo17_1:EEAD0338:EEADannot_rc) 0.775 0.410 0.742 0.889 0.889 648 1041 900 788 764 828.200
; assembly_17 versus EREB183_ZmPUCHI_Mo17_1_EEAD0338_EEADannot_rc (EREB183_ZmPUCHI_Mo17_1:EEAD0338:EEADannot_rc); m=222/237; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 828.2; -----------GCGGCGGCG ; cor=0.775; Ncor=0.410; logoDP=0.742; NsEucl=0.889; NSW=0.889; rcor=648; rNcor=1041; rlogoDP=900; rNsEucl=788; rNSW=764; rank_mean=828.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 15 4 3 9 2 2 5 4 3 c 0 0 0 0 0 0 0 0 0 0 0 4 84 0 1 94 0 0 84 0 g 0 0 0 0 0 0 0 0 0 0 0 69 4 93 88 0 97 90 3 95 t 0 0 0 0 0 0 0 0 0 0 0 12 8 4 2 4 1 5 9 2

LBD16_RA2_Mo17_1_EEAD0420_EEADannot_rc_shift10 (LBD16_RA2_Mo17_1:EEAD0420:EEADannot_rc) 0.726 0.454 4.136 0.881 0.859 902 875 501 883 1006 833.400
; assembly_17 versus LBD16_RA2_Mo17_1_EEAD0420_EEADannot_rc (LBD16_RA2_Mo17_1:EEAD0420:EEADannot_rc); m=223/237; ncol2=15; w=0; offset=1; strand=R; shift=10; score= 833.4; ----------GGCGGCGGCG ; cor=0.726; Ncor=0.454; logoDP=4.136; NsEucl=0.881; NSW=0.859; rcor=902; rNcor=875; rlogoDP=501; rNsEucl=883; rNSW=1006; rank_mean=833.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 6 1 2 1 3 9 2 0 8 0 c 0 0 0 0 0 0 0 0 0 0 6 9 98 1 14 86 0 2 87 1 g 0 0 0 0 0 0 0 0 0 0 84 90 0 96 81 3 97 98 3 97 t 0 0 0 0 0 0 0 0 0 0 4 0 0 2 2 2 1 0 2 2

EREB149_Mo17_1_EEAD0336_EEADannot_shift10 (EREB149_Mo17_1:EEAD0336:EEADannot) 0.702 0.468 4.167 0.884 0.864 1078 833 490 846 973 844.000
; assembly_17 versus EREB149_Mo17_1_EEAD0336_EEADannot (EREB149_Mo17_1:EEAD0336:EEADannot); m=224/237; ncol2=14; w=0; offset=1; strand=D; shift=10; score= 844; ----------GGCGGCGGCG ; cor=0.702; Ncor=0.468; logoDP=4.167; NsEucl=0.884; NSW=0.864; rcor=1078; rNcor=833; rlogoDP=490; rNsEucl=846; rNSW=973; rank_mean=844.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 3 17 4 6 12 5 1 12 6 4 c 0 0 0 0 0 0 0 0 0 0 4 0 86 0 2 82 0 3 86 0 g 0 0 0 0 0 0 0 0 0 0 85 79 1 90 84 1 97 83 2 95 t 0 0 0 0 0 0 0 0 0 0 8 4 9 4 2 12 2 2 6 1

ERF1_ERF1_ArabidopsisPBM_rc_shift12 (ERF1:ERF1:ArabidopsisPBM_rc) 0.770 0.474 0.248 0.879 0.882 669 812 1041 902 826 850.000
; assembly_17 versus ERF1_ERF1_ArabidopsisPBM_rc (ERF1:ERF1:ArabidopsisPBM_rc); m=225/237; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 850; ------------tGGCGGCG ; cor=0.770; Ncor=0.474; logoDP=0.248; NsEucl=0.879; NSW=0.882; rcor=669; rNcor=812; rlogoDP=1041; rNsEucl=902; rNSW=826; rank_mean=850.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 13 1 3 1 1 1 1 2 c 0 0 0 0 0 0 0 0 0 0 0 0 24 1 2 97 0 2 97 1 g 0 0 0 0 0 0 0 0 0 0 0 0 5 97 90 0 95 96 1 82 t 0 0 0 0 0 0 0 0 0 0 0 0 58 1 5 2 4 1 1 15

ERF13_MA1254.1_JASPAR_rc_shift8 (ERF13:MA1254.1:JASPAR_rc) 0.701 0.514 0.358 0.895 0.879 1081 666 974 688 848 851.400
; assembly_17 versus ERF13_MA1254.1_JASPAR_rc (ERF13:MA1254.1:JASPAR_rc); m=226/237; ncol2=15; w=-1; offset=-1; strand=R; shift=8; score= 851.4; --------rwaayGGCGGCk ; cor=0.701; Ncor=0.514; logoDP=0.358; NsEucl=0.895; NSW=0.879; rcor=1081; rNcor=666; rlogoDP=974; rNsEucl=688; rNSW=848; rank_mean=851.400; match_rank= a 0 0 0 0 0 0 0 0 178 253 267 345 103 0 32 0 0 0 0 1 c 0 0 0 0 0 0 0 0 77 127 37 16 151 0 0 567 0 0 567 28 g 0 0 0 0 0 0 0 0 231 47 126 124 7 570 518 0 570 570 0 300 t 0 0 0 0 0 0 0 0 84 143 140 85 309 0 20 3 0 0 3 241

CRF4_MA0976.2_JASPAR_rc_shift6 (CRF4:MA0976.2:JASPAR_rc) 0.729 0.468 1.834 0.881 0.874 888 830 761 879 907 853.000
; assembly_17 versus CRF4_MA0976.2_JASPAR_rc (CRF4:MA0976.2:JASPAR_rc); m=227/237; ncol2=12; w=-3; offset=-3; strand=R; shift=6; score= 853; ------ygGyGGCGGCGg-- ; cor=0.729; Ncor=0.468; logoDP=1.834; NsEucl=0.881; NSW=0.874; rcor=888; rNcor=830; rlogoDP=761; rNsEucl=879; rNSW=907; rank_mean=853.000; match_rank= a 0 0 0 0 0 0 363 369 134 131 25 87 51 9 9 63 163 321 0 0 c 0 0 0 0 0 0 757 198 40 653 16 9 1734 15 22 1744 111 247 0 0 g 0 0 0 0 0 0 168 1002 1659 12 1804 1794 2 1866 1865 4 1377 1167 0 0 t 0 0 0 0 0 0 612 331 67 1104 55 10 113 10 4 89 249 165 0 0

EREB46_ZmSHINE_B73_1_m1_EEAD0349_EEADannot_shift10 (EREB46_ZmSHINE_B73_1_m1:EEAD0349:EEADannot) 0.702 0.439 4.147 0.886 0.869 1079 929 498 828 941 855.000
; assembly_17 versus EREB46_ZmSHINE_B73_1_m1_EEAD0349_EEADannot (EREB46_ZmSHINE_B73_1_m1:EEAD0349:EEADannot); m=228/237; ncol2=15; w=0; offset=1; strand=D; shift=10; score= 855; ----------GGCGGCGGCG ; cor=0.702; Ncor=0.439; logoDP=4.147; NsEucl=0.886; NSW=0.869; rcor=1079; rNcor=929; rlogoDP=498; rNsEucl=828; rNSW=941; rank_mean=855.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 7 13 9 2 9 5 1 6 9 2 c 0 0 0 0 0 0 0 0 0 0 9 0 77 0 3 71 0 2 77 2 g 0 0 0 0 0 0 0 0 0 0 79 82 1 95 83 3 99 88 2 96 t 0 0 0 0 0 0 0 0 0 0 5 5 13 3 5 21 0 4 12 0

ERF11_MA1001.3_JASPAR_rc_shift6 (ERF11:MA1001.3:JASPAR_rc) 0.729 0.469 1.610 0.881 0.873 884 829 782 881 914 858.000
; assembly_17 versus ERF11_MA1001.3_JASPAR_rc (ERF11:MA1001.3:JASPAR_rc); m=229/237; ncol2=12; w=-3; offset=-3; strand=R; shift=6; score= 858; ------ygGyGGCGGCGg-- ; cor=0.729; Ncor=0.469; logoDP=1.610; NsEucl=0.881; NSW=0.873; rcor=884; rNcor=829; rlogoDP=782; rNsEucl=881; rNSW=914; rank_mean=858.000; match_rank= a 0 0 0 0 0 0 290 286 157 81 18 74 24 6 9 38 109 224 0 0 c 0 0 0 0 0 0 522 144 45 435 11 9 1271 5 13 1270 63 181 0 0 g 0 0 0 0 0 0 126 653 1086 5 1304 1281 2 1346 1347 6 1008 830 0 0 t 0 0 0 0 0 0 435 290 85 852 40 9 76 16 4 59 193 138 0 0

ETHYLENE_1gcc_A_3D-footprint_shift12 (ETHYLENE:1gcc_A:3D-footprint) 0.709 0.473 4.983 0.861 0.845 1029 817 392 1024 1052 862.800
; assembly_17 versus ETHYLENE_1gcc_A_3D-footprint (ETHYLENE:1gcc_A:3D-footprint); m=230/237; ncol2=9; w=0; offset=3; strand=D; shift=12; score= 862.8; ------------TGGCGGCT ; cor=0.709; Ncor=0.473; logoDP=4.983; NsEucl=0.861; NSW=0.845; rcor=1029; rNcor=817; rlogoDP=392; rNsEucl=1024; rNSW=1052; rank_mean=862.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 8 0 8 0 0 0 0 8 c 0 0 0 0 0 0 0 0 0 0 0 0 8 0 8 96 0 0 96 0 g 0 0 0 0 0 0 0 0 0 0 0 0 8 96 72 0 96 96 0 8 t 0 0 0 0 0 0 0 0 0 0 0 0 72 0 8 0 0 0 0 80

RAP2-3_MA1051.1_JASPAR_rc_shift10 (RAP2-3:MA1051.1:JASPAR_rc) 0.719 0.523 0.613 0.874 0.874 949 629 919 948 906 870.200
; assembly_17 versus RAP2-3_MA1051.1_JASPAR_rc (RAP2-3:MA1051.1:JASPAR_rc); m=231/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 870.2; ----------kGCGGCGc-- ; cor=0.719; Ncor=0.523; logoDP=0.613; NsEucl=0.874; NSW=0.874; rcor=949; rNcor=629; rlogoDP=919; rNsEucl=948; rNSW=906; rank_mean=870.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 73 85 15 3 4 5 58 107 0 0 c 0 0 0 0 0 0 0 0 0 0 6 26 976 4 244 982 33 543 0 0 g 0 0 0 0 0 0 0 0 0 0 664 780 3 977 746 6 761 232 0 0 t 0 0 0 0 0 0 0 0 0 0 257 109 6 16 6 7 147 119 0 0

EREB145_ZmSHINE_Mo17_1_EEAD0334_EEADannot_rc_shift11 (EREB145_ZmSHINE_Mo17_1:EEAD0334:EEADannot_rc) 0.763 0.404 0.769 0.883 0.877 706 1070 893 850 867 877.200
; assembly_17 versus EREB145_ZmSHINE_Mo17_1_EEAD0334_EEADannot_rc (EREB145_ZmSHINE_Mo17_1:EEAD0334:EEADannot_rc); m=232/237; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 877.2; -----------GCGGCGGCG ; cor=0.763; Ncor=0.404; logoDP=0.769; NsEucl=0.883; NSW=0.877; rcor=706; rNcor=1070; rlogoDP=893; rNsEucl=850; rNSW=867; rank_mean=877.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 12 6 1 4 2 0 3 5 0 c 0 0 0 0 0 0 0 0 0 0 0 2 83 0 0 86 1 2 83 1 g 0 0 0 0 0 0 0 0 0 0 0 80 4 98 94 0 99 93 3 98 t 0 0 0 0 0 0 0 0 0 0 0 6 7 1 2 12 0 2 9 1

RAP2.2_M0021_1.02_CISBP_rc_shift13 (RAP2.2:M0021_1.02:CISBP_rc) 0.716 0.417 0.094 0.883 0.905 974 1010 1083 847 591 901.000
; assembly_17 versus RAP2.2_M0021_1.02_CISBP_rc (RAP2.2:M0021_1.02:CISBP_rc); m=233/237; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 901; -------------gsCrscm ; cor=0.716; Ncor=0.417; logoDP=0.094; NsEucl=0.883; NSW=0.905; rcor=974; rNcor=1010; rlogoDP=1083; rNsEucl=847; rNSW=591; rank_mean=901.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 19 24 1 33 14 13 28 c 0 0 0 0 0 0 0 0 0 0 0 0 0 23 28 78 0 25 58 26 g 0 0 0 0 0 0 0 0 0 0 0 0 0 35 33 0 66 50 7 22 t 0 0 0 0 0 0 0 0 0 0 0 0 0 23 15 21 1 11 22 24

ERF109_MA1053.1_JASPAR_rc_shift10 (ERF109:MA1053.1:JASPAR_rc) 0.715 0.520 0.873 0.866 0.856 976 637 881 998 1023 903.000
; assembly_17 versus ERF109_MA1053.1_JASPAR_rc (ERF109:MA1053.1:JASPAR_rc); m=234/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 903; ----------GGCGGCGs-- ; cor=0.715; Ncor=0.520; logoDP=0.873; NsEucl=0.866; NSW=0.856; rcor=976; rNcor=637; rlogoDP=881; rNsEucl=998; rNSW=1023; rank_mean=903.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 18 86 5 3 2 3 6 13 0 0 c 0 0 0 0 0 0 0 0 0 0 2 13 978 2 168 989 8 661 0 0 g 0 0 0 0 0 0 0 0 0 0 773 862 13 982 827 5 936 287 0 0 t 0 0 0 0 0 0 0 0 0 0 207 38 4 13 3 3 50 38 0 0

DEAR4_DEAR4_2_ArabidopsisPBM_rc_shift12 (DEAR4:DEAR4_2:ArabidopsisPBM_rc) 0.732 0.450 0.701 0.873 0.872 875 890 904 951 924 908.800
; assembly_17 versus DEAR4_DEAR4_2_ArabidopsisPBM_rc (DEAR4:DEAR4_2:ArabidopsisPBM_rc); m=235/237; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 908.8; ------------aGGCGGCG ; cor=0.732; Ncor=0.450; logoDP=0.701; NsEucl=0.873; NSW=0.872; rcor=875; rNcor=890; rlogoDP=904; rNsEucl=951; rNSW=924; rank_mean=908.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 61 9 7 3 1 0 1 2 c 0 0 0 0 0 0 0 0 0 0 0 0 15 2 9 95 1 8 87 2 g 0 0 0 0 0 0 0 0 0 0 0 0 20 86 83 1 98 91 0 94 t 0 0 0 0 0 0 0 0 0 0 0 0 4 3 1 1 0 1 12 2

ORA47_ORA47_2_ArabidopsisPBM_rc_shift12 (ORA47:ORA47_2:ArabidopsisPBM_rc) 0.721 0.444 0.584 0.871 0.867 935 915 928 969 959 941.200
; assembly_17 versus ORA47_ORA47_2_ArabidopsisPBM_rc (ORA47:ORA47_2:ArabidopsisPBM_rc); m=236/237; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 941.2; ------------rGkCGGCG ; cor=0.721; Ncor=0.444; logoDP=0.584; NsEucl=0.871; NSW=0.867; rcor=935; rNcor=915; rlogoDP=928; rNsEucl=969; rNSW=959; rank_mean=941.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 42 2 5 1 0 0 0 4 c 0 0 0 0 0 0 0 0 0 0 0 0 12 1 5 98 1 3 92 2 g 0 0 0 0 0 0 0 0 0 0 0 0 25 93 65 0 98 97 1 93 t 0 0 0 0 0 0 0 0 0 0 0 0 21 4 25 1 1 0 7 1

ERF012_MA1248.2_JASPAR_rc_shift13 (ERF012:MA1248.2:JASPAR_rc) 0.752 0.439 0.228 0.859 0.861 764 928 1047 1028 994 952.200
; assembly_17 versus ERF012_MA1248.2_JASPAR_rc (ERF012:MA1248.2:JASPAR_rc); m=237/237; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 952.2; -------------GkCGGTG ; cor=0.752; Ncor=0.439; logoDP=0.228; NsEucl=0.859; NSW=0.861; rcor=764; rNcor=928; rlogoDP=1047; rNsEucl=1028; rNSW=994; rank_mean=952.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 10 98 0 0 0 2 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 563 0 0 36 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 558 171 1 567 568 0 568 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 299 4 1 0 530 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	Aligned matrices
assembly_17_shift9 (assembly_17)												; assembly_17; m=0 (reference); ncol1=11; shift=9; ncol=20; ---------hwCCGGCGGmd ; Alignment reference a 0 0 0 0 0 0 0 0 0 73 88 21 15 5 14 15 8 32 97 80 c 0 0 0 0 0 0 0 0 0 91 40 226 260 10 18 248 4 8 73 44 g 0 0 0 0 0 0 0 0 0 32 67 31 6 270 243 2 271 234 48 86 t 0 0 0 0 0 0 0 0 0 93 94 11 8 4 14 24 6 15 71 79
AT5G05550_UN0356.1_JASPAR_shift7 (AT5G05550:UN0356.1:JASPAR)	0.848	0.718	5.142	0.925	0.939	264	75	356	162	202	211.800	; assembly_17 versus AT5G05550_UN0356.1_JASPAR (AT5G05550:UN0356.1:JASPAR); m=1/237; ncol2=13; w=-2; offset=-2; strand=D; shift=7; score= 211.8; -------wtCTCCGGCGahr ; cor=0.848; Ncor=0.718; logoDP=5.142; NsEucl=0.925; NSW=0.939; rcor=264; rNcor=75; rlogoDP=356; rNsEucl=162; rNSW=202; rank_mean=211.800; match_rank= a 0 0 0 0 0 0 0 845 482 41 160 24 7 13 105 59 128 1363 597 707 c 0 0 0 0 0 0 0 280 390 1863 13 2244 2283 0 119 2038 68 208 641 289 g 0 0 0 0 0 0 0 463 327 43 328 15 0 2281 2017 10 2037 428 377 796 t 0 0 0 0 0 0 0 710 1099 351 1797 15 8 4 57 191 65 299 683 506
AT5G05550.DAP_M0772_AthalianaCistrome_shift6 (AT5G05550.DAP:M0772:AthalianaCistrome)	0.859	0.630	5.198	0.930	0.946	227	245	346	126	141	217.000	; assembly_17 versus AT5G05550.DAP_M0772_AthalianaCistrome (AT5G05550.DAP:M0772:AthalianaCistrome); m=2/237; ncol2=15; w=-3; offset=-3; strand=D; shift=6; score= 217; ------hwtytCCGGCGayr ; cor=0.859; Ncor=0.630; logoDP=5.198; NsEucl=0.930; NSW=0.946; rcor=227; rNcor=245; rlogoDP=346; rNsEucl=126; rNSW=141; rank_mean=217.000; match_rank= a 0 0 0 0 0 0 181 192 123 7 86 1 0 0 52 0 35 394 96 184 c 0 0 0 0 0 0 152 81 62 355 9 595 596 0 68 496 17 27 213 75 g 0 0 0 0 0 0 71 98 45 3 123 0 0 596 451 0 543 115 71 259 t 0 0 0 0 0 0 192 225 366 231 378 0 0 0 25 100 1 60 216 78
Zm00001d052229_MA1818.1_JASPAR_rc_shift10 (Zm00001d052229:MA1818.1:JASPAR_rc)	0.873	0.794	4.040	0.923	0.940	174	23	513	191	188	217.800	; assembly_17 versus Zm00001d052229_MA1818.1_JASPAR_rc (Zm00001d052229:MA1818.1:JASPAR_rc); m=3/237; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 217.8; ----------ggCGGCGGcg ; cor=0.873; Ncor=0.794; logoDP=4.040; NsEucl=0.923; NSW=0.940; rcor=174; rNcor=23; rlogoDP=513; rNsEucl=191; rNSW=188; rank_mean=217.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 986 1210 0 0 0 0 0 0 969 1151 c 0 0 0 0 0 0 0 0 0 0 1908 1720 8956 0 0 8956 0 0 5207 2029 g 0 0 0 0 0 0 0 0 0 0 5142 5049 0 8956 8956 0 8956 8956 1587 4801 t 0 0 0 0 0 0 0 0 0 0 920 977 0 0 0 0 0 0 1193 975
AT5G05550.ampDAP_M0775_AthalianaCistrome_shift6 (AT5G05550.ampDAP:M0775:AthalianaCistrome)	0.856	0.628	5.362	0.928	0.943	238	257	318	136	167	223.200	; assembly_17 versus AT5G05550.ampDAP_M0775_AthalianaCistrome (AT5G05550.ampDAP:M0775:AthalianaCistrome); m=4/237; ncol2=15; w=-3; offset=-3; strand=D; shift=6; score= 223.2; ------hwtyTCCGGCGayr ; cor=0.856; Ncor=0.628; logoDP=5.362; NsEucl=0.928; NSW=0.943; rcor=238; rNcor=257; rlogoDP=318; rNsEucl=136; rNSW=167; rank_mean=223.200; match_rank= a 0 0 0 0 0 0 176 222 137 7 59 0 0 0 29 0 45 396 116 185 c 0 0 0 0 0 0 151 56 69 363 7 589 590 0 50 480 8 23 192 50 g 0 0 0 0 0 0 71 105 47 14 103 0 0 590 501 0 537 115 94 278 t 0 0 0 0 0 0 192 207 337 206 421 1 0 0 10 110 0 56 188 77
Carub.0006s0445.1_TRIHELIX_4_AT5G05550_EEAD0616_EEADannot_rc_shift9 (Carub.0006s0445.1_TRIHELIX_4_AT5G05550:EEAD0616:EEADannot_rc)	0.893	0.649	3.843	0.925	0.955	130	194	536	165	112	227.400	; assembly_17 versus Carub.0006s0445.1_TRIHELIX_4_AT5G05550_EEAD0616_EEADannot_rc (Carub.0006s0445.1_TRIHELIX_4_AT5G05550:EEAD0616:EEADannot_rc); m=5/237; ncol2=8; w=0; offset=0; strand=R; shift=9; score= 227.4; ---------yKCCGGyG--- ; cor=0.893; Ncor=0.649; logoDP=3.843; NsEucl=0.925; NSW=0.955; rcor=130; rNcor=194; rlogoDP=536; rNsEucl=165; rNSW=112; rank_mean=227.400; match_rank= a 0 0 0 0 0 0 0 0 0 1 0 3 0 0 18 1 13 0 0 0 c 0 0 0 0 0 0 0 0 0 60 1 88 99 0 0 56 4 0 0 0 g 0 0 0 0 0 0 0 0 0 4 28 7 0 100 76 2 73 0 0 0 t 0 0 0 0 0 0 0 0 0 35 71 2 1 0 6 41 10 0 0 0
ASIL2_UN0352.1_JASPAR_shift7 (ASIL2:UN0352.1:JASPAR)	0.840	0.711	5.078	0.923	0.936	299	87	371	181	235	234.600	; assembly_17 versus ASIL2_UN0352.1_JASPAR (ASIL2:UN0352.1:JASPAR); m=6/237; ncol2=13; w=-2; offset=-2; strand=D; shift=7; score= 234.6; -------wtCTCCGGCGamd ; cor=0.840; Ncor=0.711; logoDP=5.078; NsEucl=0.923; NSW=0.936; rcor=299; rNcor=87; rlogoDP=371; rNsEucl=181; rNSW=235; rank_mean=234.600; match_rank= a 0 0 0 0 0 0 0 480 297 33 74 12 6 14 63 25 83 853 393 393 c 0 0 0 0 0 0 0 168 210 1089 10 1367 1391 2 61 1233 59 144 419 188 g 0 0 0 0 0 0 0 281 210 33 147 14 0 1382 1244 7 1217 228 252 449 t 0 0 0 0 0 0 0 470 682 244 1168 6 2 1 31 134 40 174 335 369
ABR1_MA1244.2_JASPAR_shift8 (ABR1:MA1244.2:JASPAR)	0.823	0.755	5.478	0.920	0.929	379	43	300	234	308	252.800	; assembly_17 versus ABR1_MA1244.2_JASPAR (ABR1:MA1244.2:JASPAR); m=7/237; ncol2=12; w=-1; offset=-1; strand=D; shift=8; score= 252.8; --------rtkrCGGCGGmG ; cor=0.823; Ncor=0.755; logoDP=5.478; NsEucl=0.920; NSW=0.929; rcor=379; rNcor=43; rlogoDP=300; rNsEucl=234; rNSW=308; rank_mean=252.800; match_rank= a 0 0 0 0 0 0 0 0 253 103 59 150 2 0 0 4 5 33 196 66 c 0 0 0 0 0 0 0 0 18 97 15 27 590 0 12 584 10 105 298 36 g 0 0 0 0 0 0 0 0 193 14 308 401 0 598 588 0 550 445 30 421 t 0 0 0 0 0 0 0 0 136 386 218 22 8 2 0 12 35 17 76 77
Solyc06g051120.4.1_TRIHELIX_4_AT5G05550_EEAD0653_EEADannot_rc_shift9 (Solyc06g051120.4.1_TRIHELIX_4_AT5G05550:EEAD0653:EEADannot_rc)	0.821	0.821	3.900	0.925	0.938	390	18	528	166	210	262.400	; assembly_17 versus Solyc06g051120.4.1_TRIHELIX_4_AT5G05550_EEAD0653_EEADannot_rc (Solyc06g051120.4.1_TRIHELIX_4_AT5G05550:EEAD0653:EEADannot_rc); m=8/237; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 262.4; ---------yTCCGGyGAmd ; cor=0.821; Ncor=0.821; logoDP=3.900; NsEucl=0.925; NSW=0.938; rcor=390; rNcor=18; rlogoDP=528; rNsEucl=166; rNSW=210; rank_mean=262.400; match_rank= a 0 0 0 0 0 0 0 0 0 2 4 4 0 1 17 1 18 72 28 28 c 0 0 0 0 0 0 0 0 0 52 7 94 100 0 0 67 6 6 30 11 g 0 0 0 0 0 0 0 0 0 6 17 1 0 99 79 3 74 16 20 36 t 0 0 0 0 0 0 0 0 0 40 72 1 0 0 4 29 2 6 22 25
Zm00001d002364_MA1832.2_JASPAR_rc_shift10 (Zm00001d002364:MA1832.2:JASPAR_rc)	0.854	0.776	4.074	0.915	0.928	248	30	508	290	313	277.800	; assembly_17 versus Zm00001d002364_MA1832.2_JASPAR_rc (Zm00001d002364:MA1832.2:JASPAR_rc); m=9/237; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 277.8; ----------ggCGGCGGCg ; cor=0.854; Ncor=0.776; logoDP=4.074; NsEucl=0.915; NSW=0.928; rcor=248; rNcor=30; rlogoDP=508; rNsEucl=290; rNSW=313; rank_mean=277.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 2034 2750 0 0 0 0 0 0 903 2201 c 0 0 0 0 0 0 0 0 0 0 3763 3546 19090 0 0 19090 0 0 13670 3334 g 0 0 0 0 0 0 0 0 0 0 11352 11009 0 19090 19090 0 19090 19090 2981 11808 t 0 0 0 0 0 0 0 0 0 0 1941 1785 0 0 0 0 0 0 1536 1747
RRTF1.DAP_M0057_AthalianaCistrome_shift5 (RRTF1.DAP:M0057:AthalianaCistrome)	0.829	0.608	5.772	0.921	0.932	352	313	255	207	267	278.800	; assembly_17 versus RRTF1.DAP_M0057_AthalianaCistrome (RRTF1.DAP:M0057:AthalianaCistrome); m=10/237; ncol2=15; w=-4; offset=-4; strand=D; shift=5; score= 278.8; -----raaatkrCGGCGsmg ; cor=0.829; Ncor=0.608; logoDP=5.772; NsEucl=0.921; NSW=0.932; rcor=352; rNcor=313; rlogoDP=255; rNsEucl=207; rNSW=267; rank_mean=278.800; match_rank= a 0 0 0 0 0 185 252 277 386 147 105 219 1 0 0 1 1 22 172 85 c 0 0 0 0 0 99 109 49 6 42 5 31 595 0 0 599 1 166 312 42 g 0 0 0 0 0 233 100 132 101 5 236 315 0 598 600 0 565 389 39 390 t 0 0 0 0 0 83 139 142 107 406 254 35 4 2 0 0 33 23 77 83
AT3G58630.DAP_M0782_AthalianaCistrome_shift5 (AT3G58630.DAP:M0782:AthalianaCistrome)	0.836	0.613	5.289	0.922	0.934	321	295	336	194	252	279.600	; assembly_17 versus AT3G58630.DAP_M0782_AthalianaCistrome (AT3G58630.DAP:M0782:AthalianaCistrome); m=11/237; ncol2=15; w=-4; offset=-4; strand=D; shift=5; score= 279.6; -----ahwtCTCCGGCGAcr ; cor=0.836; Ncor=0.613; logoDP=5.289; NsEucl=0.922; NSW=0.934; rcor=321; rNcor=295; rlogoDP=336; rNsEucl=194; rNSW=252; rank_mean=279.600; match_rank= a 0 0 0 0 0 207 200 215 115 17 43 0 0 0 12 0 63 385 129 162 c 0 0 0 0 0 115 140 41 63 389 16 555 555 0 0 477 25 33 202 64 g 0 0 0 0 0 132 64 99 58 15 56 0 0 555 527 1 446 83 120 199 t 0 0 0 0 0 101 151 200 319 134 440 0 0 0 16 77 21 54 104 130
ESE3.ampDAP_M0061_AthalianaCistrome_shift8 (ESE3.ampDAP:M0061:AthalianaCistrome)	0.828	0.607	5.557	0.921	0.932	355	317	282	206	266	285.200	; assembly_17 versus ESE3.ampDAP_M0061_AthalianaCistrome (ESE3.ampDAP:M0061:AthalianaCistrome); m=12/237; ncol2=15; w=-1; offset=-1; strand=D; shift=8; score= 285.2; --------kygrCGGCGGmG ; cor=0.828; Ncor=0.607; logoDP=5.557; NsEucl=0.921; NSW=0.932; rcor=355; rNcor=317; rlogoDP=282; rNsEucl=206; rNSW=266; rank_mean=285.200; match_rank= a 0 0 0 0 0 0 0 0 132 133 135 156 0 0 3 5 0 9 250 65 c 0 0 0 0 0 0 0 0 35 158 14 25 583 0 2 455 0 63 251 11 g 0 0 0 0 0 0 0 0 276 38 320 366 0 597 595 0 593 517 8 485 t 0 0 0 0 0 0 0 0 157 271 131 53 17 3 0 140 7 11 91 39
ENAP2_MA2040.2_JASPAR_shift9 (ENAP2:MA2040.2:JASPAR)	0.849	0.694	5.141	0.909	0.926	263	115	357	403	343	296.200	; assembly_17 versus ENAP2_MA2040.2_JASPAR (ENAP2:MA2040.2:JASPAR); m=13/237; ncol2=9; w=0; offset=0; strand=D; shift=9; score= 296.2; ---------CTCCGGCGa-- ; cor=0.849; Ncor=0.694; logoDP=5.141; NsEucl=0.909; NSW=0.926; rcor=263; rNcor=115; rlogoDP=357; rNsEucl=403; rNSW=343; rank_mean=296.200; match_rank= a 0 0 0 0 0 0 0 0 0 41 160 24 7 13 105 59 128 1363 0 0 c 0 0 0 0 0 0 0 0 0 1863 13 2244 2283 0 119 2038 68 208 0 0 g 0 0 0 0 0 0 0 0 0 43 328 15 0 2281 2017 10 2037 428 0 0 t 0 0 0 0 0 0 0 0 0 351 1797 15 8 4 57 191 65 299 0 0
VFP5_UN0412.1_JASPAR_rc_shift6 (VFP5:UN0412.1:JASPAR_rc)	0.859	0.630	1.682	0.930	0.946	226	244	770	125	140	301.000	; assembly_17 versus VFP5_UN0412.1_JASPAR_rc (VFP5:UN0412.1:JASPAR_rc); m=14/237; ncol2=15; w=-3; offset=-3; strand=R; shift=6; score= 301; ------hwtytCCGGCGayr ; cor=0.859; Ncor=0.630; logoDP=1.682; NsEucl=0.930; NSW=0.946; rcor=226; rNcor=244; rlogoDP=770; rNsEucl=125; rNSW=140; rank_mean=301.000; match_rank= a 0 0 0 0 0 0 304 322 206 11.745 144 1.678 0 0 87.248 0 58.725 661 161 309 c 0 0 0 0 0 0 255 136 104 596 15.101 998 1000 0 114 832 28.523 45.302 357 126 g 0 0 0 0 0 0 119 164.43 75.503 5.034 206 0 0 1000 757 0 911 193 119 435 t 0 0 0 0 0 0 322 378 614 388 634 0 0 0 41.946 168 1.678 101 362 131
RAP26_MA1221.1_JASPAR_shift9 (RAP26:MA1221.1:JASPAR)	0.825	0.605	5.728	0.919	0.927	368	324	263	244	326	305.000	; assembly_17 versus RAP26_MA1221.1_JASPAR (RAP26:MA1221.1:JASPAR); m=15/237; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 305; ---------tkrCGGCGGmG ; cor=0.825; Ncor=0.605; logoDP=5.728; NsEucl=0.919; NSW=0.927; rcor=368; rNcor=324; rlogoDP=263; rNsEucl=244; rNSW=326; rank_mean=305.000; match_rank= a 0 0 0 0 0 0 0 0 0 103 64 187 1 0 1 8 0 15 197 67 c 0 0 0 0 0 0 0 0 0 139 22 11 574 0 15 567 3 60 310 9 g 0 0 0 0 0 0 0 0 0 18 326 381 0 597 581 0 579 511 14 454 t 0 0 0 0 0 0 0 0 0 337 185 18 22 0 0 22 15 11 76 67
AT3G58630.ampDAP_M0783_AthalianaCistrome_shift5 (AT3G58630.ampDAP:M0783:AthalianaCistrome)	0.825	0.605	5.059	0.921	0.931	366	322	377	219	286	314.000	; assembly_17 versus AT3G58630.ampDAP_M0783_AthalianaCistrome (AT3G58630.ampDAP:M0783:AthalianaCistrome); m=16/237; ncol2=15; w=-4; offset=-4; strand=D; shift=5; score= 314; -----awwtYTCCGGCGacr ; cor=0.825; Ncor=0.605; logoDP=5.059; NsEucl=0.921; NSW=0.931; rcor=366; rNcor=322; rlogoDP=377; rNsEucl=219; rNSW=286; rank_mean=314.000; match_rank= a 0 0 0 0 0 189 198 192 107 16 23 1 0 0 10 1 66 358 112 144 c 0 0 0 0 0 113 123 43 58 367 9 528 532 0 6 435 20 45 216 74 g 0 0 0 0 0 116 64 79 64 8 61 0 0 532 511 6 402 77 105 198 t 0 0 0 0 0 114 147 218 303 141 439 3 0 0 5 90 44 52 99 116
ERF087_MA1247.2_JASPAR_shift10 (ERF087:MA1247.2:JASPAR)	0.820	0.745	6.091	0.908	0.915	401	49	225	427	474	315.200	; assembly_17 versus ERF087_MA1247.2_JASPAR (ERF087:MA1247.2:JASPAR); m=17/237; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 315.2; ----------grCGGCGGmG ; cor=0.820; Ncor=0.745; logoDP=6.091; NsEucl=0.908; NSW=0.915; rcor=401; rNcor=49; rlogoDP=225; rNsEucl=427; rNSW=474; rank_mean=315.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 97 212 8 0 6 0 0 15 200 42 c 0 0 0 0 0 0 0 0 0 0 38 11 577 0 1 586 0 55 314 15 g 0 0 0 0 0 0 0 0 0 0 374 366 0 595 586 0 594 511 11 485 t 0 0 0 0 0 0 0 0 0 0 86 6 10 0 2 9 1 14 70 53
AT1G28160_MA1247.1_JASPAR_shift9 (AT1G28160:MA1247.1:JASPAR)	0.820	0.602	6.094	0.916	0.922	397	340	224	282	391	326.800	; assembly_17 versus AT1G28160_MA1247.1_JASPAR (AT1G28160:MA1247.1:JASPAR); m=18/237; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 326.8; ---------ygrCGGCGGmG ; cor=0.820; Ncor=0.602; logoDP=6.094; NsEucl=0.916; NSW=0.922; rcor=397; rNcor=340; rlogoDP=224; rNsEucl=282; rNSW=391; rank_mean=326.800; match_rank= a 0 0 0 0 0 0 0 0 0 129 97 212 8 0 6 0 0 15 200 42 c 0 0 0 0 0 0 0 0 0 178 38 11 577 0 1 586 0 55 314 15 g 0 0 0 0 0 0 0 0 0 28 374 366 0 595 586 0 594 511 11 485 t 0 0 0 0 0 0 0 0 0 260 86 6 10 0 2 9 1 14 70 53
ERF118_MA1671.1_JASPAR_rc_shift9 (ERF118:MA1671.1:JASPAR_rc)	0.803	0.803	4.460	0.916	0.922	486	20	455	286	397	328.800	; assembly_17 versus ERF118_MA1671.1_JASPAR_rc (ERF118:MA1671.1:JASPAR_rc); m=19/237; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 328.8; ---------ygGCGGCGghg ; cor=0.803; Ncor=0.803; logoDP=4.460; NsEucl=0.916; NSW=0.922; rcor=486; rNcor=20; rlogoDP=455; rNsEucl=286; rNSW=397; rank_mean=328.800; match_rank= a 0 0 0 0 0 0 0 0 0 639 617 48 30 7 1 10 26 482 894 643 c 0 0 0 0 0 0 0 0 0 1537 286 11 3190 3 2 3186 0 354 1143 234 g 0 0 0 0 0 0 0 0 0 292 1903 3338 9 3370 3396 8 3343 2309 385 1819 t 0 0 0 0 0 0 0 0 0 931 593 2 170 19 0 195 30 254 977 703
ASIL2_MA2039.2_JASPAR_shift9 (ASIL2:MA2039.2:JASPAR)	0.840	0.687	5.077	0.907	0.922	301	118	373	457	399	329.600	; assembly_17 versus ASIL2_MA2039.2_JASPAR (ASIL2:MA2039.2:JASPAR); m=20/237; ncol2=9; w=0; offset=0; strand=D; shift=9; score= 329.6; ---------CTCCGGCGa-- ; cor=0.840; Ncor=0.687; logoDP=5.077; NsEucl=0.907; NSW=0.922; rcor=301; rNcor=118; rlogoDP=373; rNsEucl=457; rNSW=399; rank_mean=329.600; match_rank= a 0 0 0 0 0 0 0 0 0 33 74 12 6 14 63 25 83 853 0 0 c 0 0 0 0 0 0 0 0 0 1089 10 1367 1391 2 61 1233 59 144 0 0 g 0 0 0 0 0 0 0 0 0 33 147 14 0 1382 1244 7 1217 228 0 0 t 0 0 0 0 0 0 0 0 0 244 1168 6 2 1 31 134 40 174 0 0
ERF115.ampDAP_M0030_AthalianaCistrome_shift5 (ERF115.ampDAP:M0030:AthalianaCistrome)	0.814	0.597	5.374	0.918	0.926	428	361	315	250	336	338.000	; assembly_17 versus ERF115.ampDAP_M0030_AthalianaCistrome (ERF115.ampDAP:M0030:AthalianaCistrome); m=21/237; ncol2=15; w=-4; offset=-4; strand=D; shift=5; score= 338; -----gmrrykrCGGCGGmg ; cor=0.814; Ncor=0.597; logoDP=5.374; NsEucl=0.918; NSW=0.926; rcor=428; rNcor=361; rlogoDP=315; rNsEucl=250; rNSW=336; rank_mean=338.000; match_rank= a 0 0 0 0 0 137 170 197 281 82 59 176 0 0 0 3 8 45 191 74 c 0 0 0 0 0 60 251 41 10 157 3 9 593 0 0 586 5 117 303 26 g 0 0 0 0 0 339 39 221 223 9 337 397 0 588 598 0 521 422 25 405 t 0 0 0 0 0 62 138 139 84 350 199 16 5 10 0 9 64 14 79 93
Zm00001d020595_MA1821.2_JASPAR_shift10 (Zm00001d020595:MA1821.2:JASPAR)	0.821	0.746	6.783	0.903	0.906	394	48	174	528	567	342.200	; assembly_17 versus Zm00001d020595_MA1821.2_JASPAR (Zm00001d020595:MA1821.2:JASPAR); m=22/237; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 342.2; ----------ggCGGCGGCg ; cor=0.821; Ncor=0.746; logoDP=6.783; NsEucl=0.903; NSW=0.906; rcor=394; rNcor=48; rlogoDP=174; rNsEucl=528; rNSW=567; rank_mean=342.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 856 962 0 0 1 0 0 0 0 759 c 0 0 0 0 0 0 0 0 0 0 1437 1187 7064 0 0 7062 0 0 7056 1193 g 0 0 0 0 0 0 0 0 0 0 3902 4239 0 7064 7061 1 7064 7064 3 4405 t 0 0 0 0 0 0 0 0 0 0 869 676 0 0 2 1 0 0 5 707
LBD19_IG1_AS2_B73_1_m1_EEAD0421_EEADannot_shift12 (LBD19_IG1_AS2_B73_1_m1:EEAD0421:EEADannot)	0.886	0.506	4.484	0.916	0.943	141	699	449	285	166	348.000	; assembly_17 versus LBD19_IG1_AS2_B73_1_m1_EEAD0421_EEADannot (LBD19_IG1_AS2_B73_1_m1:EEAD0421:EEADannot); m=23/237; ncol2=11; w=0; offset=3; strand=D; shift=12; score= 348; ------------CGGCGGCG ; cor=0.886; Ncor=0.506; logoDP=4.484; NsEucl=0.916; NSW=0.943; rcor=141; rNcor=699; rlogoDP=449; rNsEucl=285; rNSW=166; rank_mean=348.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 6 1 5 5 3 15 11 2 c 0 0 0 0 0 0 0 0 0 0 0 0 92 1 0 86 0 7 76 5 g 0 0 0 0 0 0 0 0 0 0 0 0 0 97 90 3 95 70 5 92 t 0 0 0 0 0 0 0 0 0 0 0 0 2 1 5 6 2 8 8 1
Zm00001d005892_MA1819.2_JASPAR_rc_shift12 (Zm00001d005892:MA1819.2:JASPAR_rc)	0.868	0.631	3.481	0.907	0.931	193	238	585	450	281	349.400	; assembly_17 versus Zm00001d005892_MA1819.2_JASPAR_rc (Zm00001d005892:MA1819.2:JASPAR_rc); m=24/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 349.4; ------------CGGCGGCG ; cor=0.868; Ncor=0.631; logoDP=3.481; NsEucl=0.907; NSW=0.931; rcor=193; rNcor=238; rlogoDP=585; rNsEucl=450; rNSW=281; rank_mean=349.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 990 748 1310 722 670 1200 765 872 c 0 0 0 0 0 0 0 0 0 0 0 0 24113 990 1696 25421 917 1794 25046 1309 g 0 0 0 0 0 0 0 0 0 0 0 0 1029 25022 23482 435 25251 23527 767 24431 t 0 0 0 0 0 0 0 0 0 0 0 0 1241 613 885 795 535 852 795 761
LBD13.ampDAP_M0471_AthalianaCistrome_shift12 (LBD13.ampDAP:M0471:AthalianaCistrome)	0.934	0.415	3.578	0.943	0.974	57	1017	573	60	43	350.000	; assembly_17 versus LBD13.ampDAP_M0471_AthalianaCistrome (LBD13.ampDAP:M0471:AthalianaCistrome); m=25/237; ncol2=15; w=0; offset=3; strand=D; shift=12; score= 350; ------------CGsCGgad ; cor=0.934; Ncor=0.415; logoDP=3.578; NsEucl=0.943; NSW=0.974; rcor=57; rNcor=1017; rlogoDP=573; rNsEucl=60; rNSW=43; rank_mean=350.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 34 34 4 17 23 116 298 245 c 0 0 0 0 0 0 0 0 0 0 0 0 494 6 210 581 0 110 94 14 g 0 0 0 0 0 0 0 0 0 0 0 0 4 507 384 0 560 280 106 170 t 0 0 0 0 0 0 0 0 0 0 0 0 66 51 0 0 15 92 100 169
RAP211_MA1266.1_JASPAR_rc_shift9 (RAP211:MA1266.1:JASPAR_rc)	0.840	0.616	0.953	0.927	0.942	300	287	865	141	178	354.200	; assembly_17 versus RAP211_MA1266.1_JASPAR_rc (RAP211:MA1266.1:JASPAR_rc); m=26/237; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 354.2; ---------mGmCGGCgrhg ; cor=0.840; Ncor=0.616; logoDP=0.953; NsEucl=0.927; NSW=0.942; rcor=300; rNcor=287; rlogoDP=865; rNsEucl=141; rNSW=178; rank_mean=354.200; match_rank= a 0 0 0 0 0 0 0 0 0 161 28 147 0 0 0 24 83 208 163 119 c 0 0 0 0 0 0 0 0 0 193 0 329 588 0 0 539 71 42 220 41 g 0 0 0 0 0 0 0 0 0 132 560 112 0 588 588 0 373 323 42 342 t 0 0 0 0 0 0 0 0 0 102 0 0 0 0 0 25 61 15 163 86
Zm00001d020595_MA1821.1_JASPAR_shift10 (Zm00001d020595:MA1821.1:JASPAR)	0.821	0.684	6.783	0.903	0.906	394	126	174	528	567	357.800	; assembly_17 versus Zm00001d020595_MA1821.1_JASPAR (Zm00001d020595:MA1821.1:JASPAR); m=27/237; ncol2=11; w=0; offset=1; strand=D; shift=10; score= 357.8; ----------ggCGGCGGCg ; cor=0.821; Ncor=0.684; logoDP=6.783; NsEucl=0.903; NSW=0.906; rcor=394; rNcor=126; rlogoDP=174; rNsEucl=528; rNSW=567; rank_mean=357.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 856 962 0 0 1 0 0 0 0 759 c 0 0 0 0 0 0 0 0 0 0 1437 1187 7064 0 0 7062 0 0 7056 1193 g 0 0 0 0 0 0 0 0 0 0 3902 4239 0 7064 7061 1 7064 7064 3 4405 t 0 0 0 0 0 0 0 0 0 0 869 676 0 0 2 1 0 0 5 707
AT5G51190_M0040_1.02_CISBP_shift9 (AT5G51190:M0040_1.02:CISBP)	0.859	0.625	4.922	0.903	0.924	223	266	404	540	358	358.200	; assembly_17 versus AT5G51190_M0040_1.02_CISBP (AT5G51190:M0040_1.02:CISBP); m=28/237; ncol2=8; w=0; offset=0; strand=D; shift=9; score= 358.2; ---------kGCCGGCG--- ; cor=0.859; Ncor=0.625; logoDP=4.922; NsEucl=0.903; NSW=0.924; rcor=223; rNcor=266; rlogoDP=404; rNsEucl=540; rNSW=358; rank_mean=358.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 c 0 0 0 0 0 0 0 0 0 13 0 100 93 0 14 100 10 0 0 0 g 0 0 0 0 0 0 0 0 0 25 100 0 7 100 86 0 70 0 0 0 t 0 0 0 0 0 0 0 0 0 62 0 0 0 0 0 0 10 0 0 0
AT3G58630_UN0391.1_JASPAR_rc_shift5 (AT3G58630:UN0391.1:JASPAR_rc)	0.836	0.613	2.242	0.922	0.934	322	296	733	195	253	359.800	; assembly_17 versus AT3G58630_UN0391.1_JASPAR_rc (AT3G58630:UN0391.1:JASPAR_rc); m=29/237; ncol2=15; w=-4; offset=-4; strand=R; shift=5; score= 359.8; -----ahwtCTCCGGCGAcr ; cor=0.836; Ncor=0.613; logoDP=2.242; NsEucl=0.922; NSW=0.934; rcor=322; rNcor=296; rlogoDP=733; rNsEucl=195; rNSW=253; rank_mean=359.800; match_rank= a 0 0 0 0 0 373 360.36 387 207 30.631 77.477 0 0 0 21.622 0 114 694 232 292 c 0 0 0 0 0 207 252 73.874 114 701 28.829 1000 1000 0 0 859 45.045 59.459 364 115 g 0 0 0 0 0 238 115 178 105 27.027 101 0 0 1000 949.55 1.802 804 149.55 216 359 t 0 0 0 0 0 182 272 360.36 575 241 793 0 0 0 28.829 139 37.838 97.297 187 234
ERF105_MA1000.1_JASPAR_shift9 (ERF105:MA1000.1:JASPAR)	0.859	0.624	4.820	0.903	0.925	228	268	419	535	356	361.200	; assembly_17 versus ERF105_MA1000.1_JASPAR (ERF105:MA1000.1:JASPAR); m=30/237; ncol2=8; w=0; offset=0; strand=D; shift=9; score= 361.2; ---------kGCCGGCG--- ; cor=0.859; Ncor=0.624; logoDP=4.820; NsEucl=0.903; NSW=0.925; rcor=228; rNcor=268; rlogoDP=419; rNsEucl=535; rNSW=356; rank_mean=361.200; match_rank= a 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 1 101 0 0 0 c 0 0 0 0 0 0 0 0 0 126 1 998 927 1 143 998 101 0 0 0 g 0 0 0 0 0 0 0 0 0 250 998 1 72 998 855 1 698 0 0 0 t 0 0 0 0 0 0 0 0 0 623 1 1 1 1 1 1 101 0 0 0
RAP2-11_MA1266.2_JASPAR_rc_shift10 (RAP2-11:MA1266.2:JASPAR_rc)	0.844	0.703	0.248	0.921	0.938	280	104	1042	214	212	370.400	; assembly_17 versus RAP2-11_MA1266.2_JASPAR_rc (RAP2-11:MA1266.2:JASPAR_rc); m=31/237; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 370.4; ----------GmCGGCgrhg ; cor=0.844; Ncor=0.703; logoDP=0.248; NsEucl=0.921; NSW=0.938; rcor=280; rNcor=104; rlogoDP=1042; rNsEucl=214; rNSW=212; rank_mean=370.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 28 147 0 0 0 24 83 208 163 119 c 0 0 0 0 0 0 0 0 0 0 0 329 588 0 0 539 71 42 220 41 g 0 0 0 0 0 0 0 0 0 0 560 112 0 588 588 0 373 323 42 342 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 61 15 163 86
ERF3.DAP_M0069_AthalianaCistrome_shift9 (ERF3.DAP:M0069:AthalianaCistrome)	0.807	0.592	5.595	0.914	0.919	467	378	279	309	436	373.800	; assembly_17 versus ERF3.DAP_M0069_AthalianaCistrome (ERF3.DAP:M0069:AthalianaCistrome); m=32/237; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 373.8; ---------ygrCGGCGGmG ; cor=0.807; Ncor=0.592; logoDP=5.595; NsEucl=0.914; NSW=0.919; rcor=467; rNcor=378; rlogoDP=279; rNsEucl=309; rNSW=436; rank_mean=373.800; match_rank= a 0 0 0 0 0 0 0 0 0 125 104 238 8 0 4 0 1 27 185 35 c 0 0 0 0 0 0 0 0 0 150 17 2 569 0 9 560 0 60 333 18 g 0 0 0 0 0 0 0 0 0 15 370 346 0 596 582 0 568 503 9 502 t 0 0 0 0 0 0 0 0 0 306 105 10 19 0 1 36 27 6 69 41
AT3G58630_UN0391.2_JASPAR_rc_shift8 (AT3G58630:UN0391.2:JASPAR_rc)	0.839	0.629	4.600	0.906	0.921	310	250	438	464	412	374.800	; assembly_17 versus AT3G58630_UN0391.2_JASPAR_rc (AT3G58630:UN0391.2:JASPAR_rc); m=33/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 374.8; --------tCTCCGGCGA-- ; cor=0.839; Ncor=0.629; logoDP=4.600; NsEucl=0.906; NSW=0.921; rcor=310; rNcor=250; rlogoDP=438; rNsEucl=464; rNSW=412; rank_mean=374.800; match_rank= a 0 0 0 0 0 0 0 0 207 31 77 0 0 0 22 0 114 694 0 0 c 0 0 0 0 0 0 0 0 114 701 29 1000 1000 0 0 859 45 59 0 0 g 0 0 0 0 0 0 0 0 105 27 101 0 0 1000 950 2 804 150 0 0 t 0 0 0 0 0 0 0 0 575 241 793 0 0 0 29 139 38 97 0 0
LEP_MA1246.2_JASPAR_rc_shift10 (LEP:MA1246.2:JASPAR_rc)	0.821	0.747	2.845	0.911	0.920	391	46	667	372	417	378.600	; assembly_17 versus LEP_MA1246.2_JASPAR_rc (LEP:MA1246.2:JASPAR_rc); m=34/237; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 378.6; ----------grCGGCGGmG ; cor=0.821; Ncor=0.747; logoDP=2.845; NsEucl=0.911; NSW=0.920; rcor=391; rNcor=46; rlogoDP=667; rNsEucl=372; rNSW=417; rank_mean=378.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 90 157 7 1 10 8 0 36 172 32 c 0 0 0 0 0 0 0 0 0 0 22 20 460 0 0 456 0 52 226 9 g 0 0 0 0 0 0 0 0 0 0 303 301 0 489 480 0 488 398 23 413 t 0 0 0 0 0 0 0 0 0 0 75 12 23 0 0 26 2 4 69 36
Zm00001d002364_MA1832.1_JASPAR_rc_shift10 (Zm00001d002364:MA1832.1:JASPAR_rc)	0.854	0.712	0.368	0.915	0.928	248	83	971	290	313	381.000	; assembly_17 versus Zm00001d002364_MA1832.1_JASPAR_rc (Zm00001d002364:MA1832.1:JASPAR_rc); m=35/237; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 381; ----------ggCGGCGGCg ; cor=0.854; Ncor=0.712; logoDP=0.368; NsEucl=0.915; NSW=0.928; rcor=248; rNcor=83; rlogoDP=971; rNsEucl=290; rNSW=313; rank_mean=381.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 2034 2750 0 0 0 0 0 0 903 2201 c 0 0 0 0 0 0 0 0 0 0 3763 3546 19090 0 0 19090 0 0 13670 3334 g 0 0 0 0 0 0 0 0 0 0 11352 11009 0 19090 19090 0 19090 19090 2981 11808 t 0 0 0 0 0 0 0 0 0 0 1941 1785 0 0 0 0 0 0 1536 1747
NtERF2_NtERF2_Athamap_rc_shift13 (NtERF2:NtERF2:Athamap_rc)	0.871	0.554	1.592	0.915	0.949	183	522	785	294	132	383.200	; assembly_17 versus NtERF2_NtERF2_Athamap_rc (NtERF2:NtERF2:Athamap_rc); m=36/237; ncol2=7; w=0; offset=4; strand=R; shift=13; score= 383.2; -------------GGCGGCr ; cor=0.871; Ncor=0.554; logoDP=1.592; NsEucl=0.915; NSW=0.949; rcor=183; rNcor=522; rlogoDP=785; rNsEucl=294; rNSW=132; rank_mean=383.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 4 c 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 13 2 3 12 1 g 0 0 0 0 0 0 0 0 0 0 0 0 0 13 10 0 11 10 1 7 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 1 0 2
RRTF1.ampDAP_M0066_AthalianaCistrome_shift4 (RRTF1.ampDAP:M0066:AthalianaCistrome)	0.824	0.477	5.692	0.921	0.932	375	793	267	211	270	383.200	; assembly_17 versus RRTF1.ampDAP_M0066_AthalianaCistrome (RRTF1.ampDAP:M0066:AthalianaCistrome); m=37/237; ncol2=19; w=-5; offset=-5; strand=D; shift=4; score= 383.2; ----rraaAWkrCGGCGsmg ; cor=0.824; Ncor=0.477; logoDP=5.692; NsEucl=0.921; NSW=0.932; rcor=375; rNcor=793; rlogoDP=267; rNsEucl=211; rNSW=270; rank_mean=383.200; match_rank= a 0 0 0 0 149 174 276 301 441 152 111 202 0 0 0 0 0 23 184 115 c 0 0 0 0 87 105 104 31 0 13 0 14 578 0 0 578 0 173 256 55 g 0 0 0 0 206 207 93 140 62 2 204 328 0 576 578 0 523 352 50 302 t 0 0 0 0 136 92 105 106 75 411 263 34 0 2 0 0 55 30 88 106
AT3G11100_UN0353.1_JASPAR_shift9 (AT3G11100:UN0353.1:JASPAR)	0.771	0.706	4.843	0.914	0.919	665	100	415	305	432	383.400	; assembly_17 versus AT3G11100_UN0353.1_JASPAR (AT3G11100:UN0353.1:JASPAR); m=38/237; ncol2=12; w=0; offset=0; strand=D; shift=9; score= 383.4; ---------ygmCGGCGAsr ; cor=0.771; Ncor=0.706; logoDP=4.843; NsEucl=0.914; NSW=0.919; rcor=665; rNcor=100; rlogoDP=415; rNsEucl=305; rNSW=432; rank_mean=383.400; match_rank= a 0 0 0 0 0 0 0 0 0 479 615 1432 16 24 57 102 73 2127 355 760 c 0 0 0 0 0 0 0 0 0 1021 330 652 2413 13 26 2298 55 58 653 289 g 0 0 0 0 0 0 0 0 0 300 1002 254 6 2445 2394 12 2311 198 886 875 t 0 0 0 0 0 0 0 0 0 696 549 158 61 14 19 84 57 113 602 572
ERF8_MA0994.3_JASPAR_shift9 (ERF8:MA0994.3:JASPAR)	0.785	0.785	5.297	0.908	0.907	581	25	331	422	561	384.000	; assembly_17 versus ERF8_MA0994.3_JASPAR (ERF8:MA0994.3:JASPAR); m=39/237; ncol2=11; w=0; offset=0; strand=D; shift=9; score= 384; ---------tgrCGGCGGCG ; cor=0.785; Ncor=0.785; logoDP=5.297; NsEucl=0.908; NSW=0.907; rcor=581; rNcor=25; rlogoDP=331; rNsEucl=422; rNSW=561; rank_mean=384.000; match_rank= a 0 0 0 0 0 0 0 0 0 116 103 426 32 3 16 11 6 16 108 21 c 0 0 0 0 0 0 0 0 0 180 50 29 649 3 9 701 2 46 537 9 g 0 0 0 0 0 0 0 0 0 33 491 252 5 728 714 0 728 667 11 674 t 0 0 0 0 0 0 0 0 0 414 99 36 57 9 4 31 7 14 87 39
ERF122_MA1261.2_JASPAR_shift10 (ERF122:MA1261.2:JASPAR)	0.784	0.712	4.263	0.911	0.920	588	80	480	371	416	387.000	; assembly_17 versus ERF122_MA1261.2_JASPAR (ERF122:MA1261.2:JASPAR); m=40/237; ncol2=10; w=0; offset=1; strand=D; shift=10; score= 387; ----------yrCGGCkGhk ; cor=0.784; Ncor=0.712; logoDP=4.263; NsEucl=0.911; NSW=0.920; rcor=588; rNcor=80; rlogoDP=480; rNsEucl=371; rNSW=416; rank_mean=387.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 10 55 0 0 0 0 0 25 41 0 c 0 0 0 0 0 0 0 0 0 0 35 0 120 0 0 106 3 0 53 10 g 0 0 0 0 0 0 0 0 0 0 16 80 0 136 138 0 89 106 9 91 t 0 0 0 0 0 0 0 0 0 0 77 3 18 2 0 32 46 7 35 37
AT5G23930_UN0357.2_JASPAR_rc_shift12 (AT5G23930:UN0357.2:JASPAR_rc)	0.863	0.627	4.189	0.901	0.921	217	258	486	581	407	389.800	; assembly_17 versus AT5G23930_UN0357.2_JASPAR_rc (AT5G23930:UN0357.2:JASPAR_rc); m=41/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 389.8; ------------yGGCGGCk ; cor=0.863; Ncor=0.627; logoDP=4.189; NsEucl=0.901; NSW=0.921; rcor=217; rNcor=258; rlogoDP=486; rNsEucl=581; rNSW=407; rank_mean=389.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 296 0 0 0 0 0 0 125 c 0 0 0 0 0 0 0 0 0 0 0 0 1135 0 0 2074 0 0 2074 91 g 0 0 0 0 0 0 0 0 0 0 0 0 43 2074 2074 0 2074 2074 0 1323 t 0 0 0 0 0 0 0 0 0 0 0 0 600 0 0 0 0 0 0 535
PUCHI_MA1252.1_JASPAR_rc_shift9 (PUCHI:MA1252.1:JASPAR_rc)	0.832	0.610	1.598	0.920	0.930	342	308	784	224	300	391.600	; assembly_17 versus PUCHI_MA1252.1_JASPAR_rc (PUCHI:MA1252.1:JASPAR_rc); m=42/237; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 391.6; ---------hrrCGGCGGmG ; cor=0.832; Ncor=0.610; logoDP=1.598; NsEucl=0.920; NSW=0.930; rcor=342; rNcor=308; rlogoDP=784; rNsEucl=224; rNSW=300; rank_mean=391.600; match_rank= a 0 0 0 0 0 0 0 0 0 124 126 199 6 0 9 1 0 20 163 42 c 0 0 0 0 0 0 0 0 0 123 34 11 459 0 1 469 0 61 256 0 g 0 0 0 0 0 0 0 0 0 37 214 260 0 475 466 0 477 397 0 397 t 0 0 0 0 0 0 0 0 0 194 104 8 13 3 2 8 1 0 59 39
ERF6_MA1006.2_JASPAR_shift9 (ERF6:MA1006.2:JASPAR)	0.887	0.564	4.976	0.898	0.927	138	483	394	638	325	395.600	; assembly_17 versus ERF6_MA1006.2_JASPAR (ERF6:MA1006.2:JASPAR); m=43/237; ncol2=7; w=0; offset=0; strand=D; shift=9; score= 395.6; ---------tGCCGGC---- ; cor=0.887; Ncor=0.564; logoDP=4.976; NsEucl=0.898; NSW=0.927; rcor=138; rNcor=483; rlogoDP=394; rNsEucl=638; rNSW=325; rank_mean=395.600; match_rank= a 0 0 0 0 0 0 0 0 0 78 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 221 0 1000 1000 0 88 1000 0 0 0 0 g 0 0 0 0 0 0 0 0 0 166 1000 0 0 1000 912 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 535 0 0 0 0 0 0 0 0 0 0
ABR1_MA1244.1_JASPAR_shift1 (ABR1:MA1244.1:JASPAR)	0.823	0.477	5.478	0.920	0.929	379	794	300	234	308	403.000	; assembly_17 versus ABR1_MA1244.1_JASPAR (ABR1:MA1244.1:JASPAR); m=44/237; ncol2=19; w=-8; offset=-8; strand=D; shift=1; score= 403; -ggcgradrtkrCGGCGGmG ; cor=0.823; Ncor=0.477; logoDP=5.478; NsEucl=0.920; NSW=0.929; rcor=379; rNcor=794; rlogoDP=300; rNsEucl=234; rNSW=308; rank_mean=403.000; match_rank= a 0 122 145 140 100 181 237 225 253 103 59 150 2 0 0 4 5 33 196 66 c 0 57 75 230 64 79 149 26 18 97 15 27 590 0 12 584 10 105 298 36 g 0 317 281 96 308 285 79 186 193 14 308 401 0 598 588 0 550 445 30 421 t 0 104 99 134 128 55 135 163 136 386 218 22 8 2 0 12 35 17 76 77
ORA59_M0005_1.02_CISBP_rc_shift12 (ORA59:M0005_1.02:CISBP_rc)	0.848	0.617	3.630	0.902	0.924	265	283	567	552	377	408.800	; assembly_17 versus ORA59_M0005_1.02_CISBP_rc (ORA59:M0005_1.02:CISBP_rc); m=45/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 408.8; ------------cGGCGGCk ; cor=0.848; Ncor=0.617; logoDP=3.630; NsEucl=0.902; NSW=0.924; rcor=265; rNcor=283; rlogoDP=567; rNsEucl=552; rNSW=377; rank_mean=408.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 48 0 5 98 0 0 100 19 g 0 0 0 0 0 0 0 0 0 0 0 0 11 100 95 0 88 100 0 46 t 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 2 12 0 0 35
ERF094_MA1049.1_JASPAR_rc_shift12 (ERF094:MA1049.1:JASPAR_rc)	0.848	0.617	3.600	0.902	0.924	266	284	570	550	376	409.200	; assembly_17 versus ERF094_MA1049.1_JASPAR_rc (ERF094:MA1049.1:JASPAR_rc); m=46/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 409.2; ------------cGGCGGCk ; cor=0.848; Ncor=0.617; logoDP=3.600; NsEucl=0.902; NSW=0.924; rcor=266; rNcor=284; rlogoDP=570; rNsEucl=550; rNSW=376; rank_mean=409.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 173 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 482 0 49 975 0 0 999 192 g 0 0 0 0 0 0 0 0 0 0 0 0 104 999 951 0 877 999 0 461 t 0 0 0 0 0 0 0 0 0 0 0 0 241 0 0 25 122 0 0 346
AT5G67000_MA1261.1_JASPAR_shift6 (AT5G67000:MA1261.1:JASPAR)	0.784	0.575	4.265	0.918	0.927	587	444	478	248	330	417.400	; assembly_17 versus AT5G67000_MA1261.1_JASPAR (AT5G67000:MA1261.1:JASPAR); m=47/237; ncol2=15; w=-3; offset=-3; strand=D; shift=6; score= 417.4; ------ykdwyrCGGCkGhk ; cor=0.784; Ncor=0.575; logoDP=4.265; NsEucl=0.918; NSW=0.927; rcor=587; rNcor=444; rlogoDP=478; rNsEucl=248; rNSW=330; rank_mean=417.400; match_rank= a 0 0 0 0 0 0 34 26 39 40 10 55 0 0 0 0 0 25 41 0 c 0 0 0 0 0 0 47 20 7 30 35 0 120 0 0 106 3 0 53 10 g 0 0 0 0 0 0 15 42 57 14 16 80 0 136 138 0 89 106 9 91 t 0 0 0 0 0 0 42 50 35 54 77 3 18 2 0 32 46 7 35 37
LOB_MA2022.2_JASPAR_rc_shift8 (LOB:MA2022.2:JASPAR_rc)	0.790	0.668	4.156	0.910	0.911	549	154	497	389	515	420.800	; assembly_17 versus LOB_MA2022.2_JASPAR_rc (LOB:MA2022.2:JASPAR_rc); m=48/237; ncol2=13; w=-1; offset=-1; strand=R; shift=8; score= 420.8; --------gckGCGGCGGCG ; cor=0.790; Ncor=0.668; logoDP=4.156; NsEucl=0.910; NSW=0.911; rcor=549; rNcor=154; rlogoDP=497; rNsEucl=389; rNSW=515; rank_mean=420.800; match_rank= a 0 0 0 0 0 0 0 0 113 101 103 50 24 27 16 23 24 18 133 86 c 0 0 0 0 0 0 0 0 71 532 44 38 733 8 7 729 4 10 552 24 g 0 0 0 0 0 0 0 0 538 33 398 693 1 721 768 4 739 760 18 569 t 0 0 0 0 0 0 0 0 73 129 250 14 37 39 4 39 28 7 92 116
CRF10.DAP_M0045_AthalianaCistrome_rc_shift9 (CRF10.DAP:M0045:AthalianaCistrome_rc)	0.820	0.601	1.692	0.918	0.925	398	341	769	253	351	422.400	; assembly_17 versus CRF10.DAP_M0045_AthalianaCistrome_rc (CRF10.DAP:M0045:AthalianaCistrome_rc); m=49/237; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 422.4; ---------ygRCGGCGGmG ; cor=0.820; Ncor=0.601; logoDP=1.692; NsEucl=0.918; NSW=0.925; rcor=398; rNcor=341; rlogoDP=769; rNsEucl=253; rNSW=351; rank_mean=422.400; match_rank= a 0 0 0 0 0 0 0 0 0 126 133 161 18 0 10 1 0 11 195 41 c 0 0 0 0 0 0 0 0 0 182 58 6 549 0 0 553 7 38 319 8 g 0 0 0 0 0 0 0 0 0 37 289 432 0 600 590 0 578 547 7 485 t 0 0 0 0 0 0 0 0 0 255 120 1 33 0 0 46 15 4 79 66
ERF086_MA1252.2_JASPAR_rc_shift11 (ERF086:MA1252.2:JASPAR_rc)	0.836	0.627	3.338	0.905	0.918	320	259	599	496	441	423.000	; assembly_17 versus ERF086_MA1252.2_JASPAR_rc (ERF086:MA1252.2:JASPAR_rc); m=50/237; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 423; -----------rCGGCGGmG ; cor=0.836; Ncor=0.627; logoDP=3.338; NsEucl=0.905; NSW=0.918; rcor=320; rNcor=259; rlogoDP=599; rNsEucl=496; rNSW=441; rank_mean=423.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 199 6 0 9 1 0 20 163 42 c 0 0 0 0 0 0 0 0 0 0 0 11 459 0 1 469 0 61 256 0 g 0 0 0 0 0 0 0 0 0 0 0 260 0 475 466 0 477 397 0 397 t 0 0 0 0 0 0 0 0 0 0 0 8 13 3 2 8 1 0 59 39
ERF15_MA1231.3_JASPAR_rc_shift12 (ERF15:MA1231.3:JASPAR_rc)	0.848	0.616	3.577	0.901	0.921	272	285	574	582	409	424.400	; assembly_17 versus ERF15_MA1231.3_JASPAR_rc (ERF15:MA1231.3:JASPAR_rc); m=51/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 424.4; ------------hGGCGGCk ; cor=0.848; Ncor=0.616; logoDP=3.577; NsEucl=0.901; NSW=0.921; rcor=272; rNcor=285; rlogoDP=574; rNsEucl=582; rNSW=409; rank_mean=424.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 581 8 39 12 9 5 18 87 c 0 0 0 0 0 0 0 0 0 0 0 0 911 8 14 2067 3 1 2078 94 g 0 0 0 0 0 0 0 0 0 0 0 0 62 2107 2066 3 2062 2124 7 942 t 0 0 0 0 0 0 0 0 0 0 0 0 579 10 14 51 59 3 30 1010
LBD18_MA1673.2_JASPAR_rc_shift8 (LBD18:MA1673.2:JASPAR_rc)	0.901	0.526	0.315	0.916	0.951	111	611	994	278	129	424.600	; assembly_17 versus LBD18_MA1673.2_JASPAR_rc (LBD18:MA1673.2:JASPAR_rc); m=52/237; ncol2=8; w=-1; offset=-1; strand=R; shift=8; score= 424.6; --------TTTCCGGC---- ; cor=0.901; Ncor=0.526; logoDP=0.315; NsEucl=0.916; NSW=0.951; rcor=111; rNcor=611; rlogoDP=994; rNsEucl=278; rNSW=129; rank_mean=424.600; match_rank= a 0 0 0 0 0 0 0 0 679 668 240 251 166 153 130 286 0 0 0 0 c 0 0 0 0 0 0 0 0 384 1009 159 5338 5531 316 290 4833 0 0 0 0 g 0 0 0 0 0 0 0 0 472 191 93 171 40 5168 5323 245 0 0 0 0 t 0 0 0 0 0 0 0 0 4330 3997 5373 105 128 228 122 501 0 0 0 0
LOB.DAP_M0473_AthalianaCistrome_rc_shift10 (LOB.DAP:M0473:AthalianaCistrome_rc)	0.880	0.400	2.383	0.936	0.959	153	1088	729	98	94	432.400	; assembly_17 versus LOB.DAP_M0473_AthalianaCistrome_rc (LOB.DAP:M0473:AthalianaCistrome_rc); m=53/237; ncol2=21; w=0; offset=1; strand=R; shift=10; score= 432.4; ----------kgCGGCGGmg ; cor=0.880; Ncor=0.400; logoDP=2.383; NsEucl=0.936; NSW=0.959; rcor=153; rNcor=1088; rlogoDP=729; rNsEucl=98; rNSW=94; rank_mean=432.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 115 117 56 53 25 53 19 51 242 133 c 0 0 0 0 0 0 0 0 0 0 72 114 452 7 115 507 2 20 202 3 g 0 0 0 0 0 0 0 0 0 0 229 296 4 471 428 0 526 446 45 351 t 0 0 0 0 0 0 0 0 0 0 157 46 61 42 5 13 26 56 84 86
ERF073_MA1754.2_JASPAR_rc_shift9 (ERF073:MA1754.2:JASPAR_rc)	0.778	0.778	4.886	0.905	0.901	624	28	408	486	629	435.000	; assembly_17 versus ERF073_MA1754.2_JASPAR_rc (ERF073:MA1754.2:JASPAR_rc); m=54/237; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 435; ---------yGGCGGCGGmg ; cor=0.778; Ncor=0.778; logoDP=4.886; NsEucl=0.905; NSW=0.901; rcor=624; rNcor=28; rlogoDP=408; rNsEucl=486; rNSW=629; rank_mean=435.000; match_rank= a 0 0 0 0 0 0 0 0 0 114 55 52 12 0 7 0 0 69 366 142 c 0 0 0 0 0 0 0 0 0 380 14 0 975 0 0 968 0 155 377 28 g 0 0 0 0 0 0 0 0 0 0 837 948 0 1000 993 0 975 742 89 648 t 0 0 0 0 0 0 0 0 0 506 94 0 12 0 0 32 25 34 169 181
ERF13_MA1004.2_JASPAR_rc_shift13 (ERF13:MA1004.2:JASPAR_rc)	0.873	0.556	2.435	0.903	0.935	175	519	725	523	241	436.600	; assembly_17 versus ERF13_MA1004.2_JASPAR_rc (ERF13:MA1004.2:JASPAR_rc); m=55/237; ncol2=7; w=0; offset=4; strand=R; shift=13; score= 436.6; -------------GgCGGCs ; cor=0.873; Ncor=0.556; logoDP=2.435; NsEucl=0.903; NSW=0.935; rcor=175; rNcor=519; rlogoDP=725; rNsEucl=523; rNSW=241; rank_mean=436.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 113 0 0 0 0 22 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 145 983 16 32 951 283 g 0 0 0 0 0 0 0 0 0 0 0 0 0 999 645 16 983 951 49 478 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 97 0 0 16 0 217
DEAR3_MA1376.2_JASPAR_rc_shift13 (DEAR3:MA1376.2:JASPAR_rc)	0.855	0.544	1.381	0.909	0.942	244	556	800	413	176	437.800	; assembly_17 versus DEAR3_MA1376.2_JASPAR_rc (DEAR3:MA1376.2:JASPAR_rc); m=56/237; ncol2=7; w=0; offset=4; strand=R; shift=13; score= 437.8; -------------GkCGGyG ; cor=0.855; Ncor=0.544; logoDP=1.381; NsEucl=0.909; NSW=0.942; rcor=244; rNcor=556; rlogoDP=800; rNsEucl=413; rNSW=176; rank_mean=437.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 34 101 26 8 26 17 41 c 0 0 0 0 0 0 0 0 0 0 0 0 0 68 56 865 19 58 634 24 g 0 0 0 0 0 0 0 0 0 0 0 0 0 828 524 44 934 889 15 787 t 0 0 0 0 0 0 0 0 0 0 0 0 0 70 320 66 39 27 335 148
AS2.DAP_M0477_AthalianaCistrome_rc_shift0 (AS2.DAP:M0477:AthalianaCistrome_rc)	0.855	0.448	0.988	0.936	0.955	246	902	859	96	110	442.600	; assembly_17 versus AS2.DAP_M0477_AthalianaCistrome_rc (AS2.DAP:M0477:AthalianaCistrome_rc); m=57/237; ncol2=21; w=-9; offset=-9; strand=R; shift=0; score= 442.6; CGsCGgmrrwkrCGGcGgmg ; cor=0.855; Ncor=0.448; logoDP=0.988; NsEucl=0.936; NSW=0.955; rcor=246; rNcor=902; rlogoDP=859; rNsEucl=96; rNSW=110; rank_mean=442.600; match_rank= a 36 39 16 22 9 69 209 166 189 180 97 126 54 2 0 99 34 104 178 94 c 319 16 133 411 0 18 110 10 22 102 52 51 357 2 65 275 10 18 123 26 g 8 350 287 1 407 298 55 192 155 16 163 233 0 433 372 14 362 272 47 221 t 76 34 3 5 23 54 65 71 73 141 127 29 28 2 2 51 33 45 91 98
AT1G28160.ampDAP_M0035_AthalianaCistrome_rc_shift9 (AT1G28160.ampDAP:M0035:AthalianaCistrome_rc)	0.801	0.629	2.860	0.912	0.915	499	247	664	339	470	443.800	; assembly_17 versus AT1G28160.ampDAP_M0035_AthalianaCistrome_rc (AT1G28160.ampDAP:M0035:AthalianaCistrome_rc); m=58/237; ncol2=14; w=0; offset=0; strand=R; shift=9; score= 443.8; ---------yGrCGGCGGmG ; cor=0.801; Ncor=0.629; logoDP=2.860; NsEucl=0.912; NSW=0.915; rcor=499; rNcor=247; rlogoDP=664; rNsEucl=339; rNSW=470; rank_mean=443.800; match_rank= a 0 0 0 0 0 0 0 0 0 94 84 199 0 0 0 15 0 26 170 74 c 0 0 0 0 0 0 0 0 0 243 16 6 585 0 0 550 0 105 327 7 g 0 0 0 0 0 0 0 0 0 0 428 381 0 590 592 0 581 447 4 465 t 0 0 0 0 0 0 0 0 0 255 64 6 7 2 0 27 11 14 91 46
ERF094_MA1049.2_JASPAR_rc_shift13 (ERF094:MA1049.2:JASPAR_rc)	0.882	0.562	2.756	0.900	0.930	149	501	688	597	298	446.600	; assembly_17 versus ERF094_MA1049.2_JASPAR_rc (ERF094:MA1049.2:JASPAR_rc); m=59/237; ncol2=7; w=0; offset=4; strand=R; shift=13; score= 446.6; -------------GGCGGCk ; cor=0.882; Ncor=0.562; logoDP=2.756; NsEucl=0.900; NSW=0.930; rcor=149; rNcor=501; rlogoDP=688; rNsEucl=597; rNSW=298; rank_mean=446.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 975 0 0 999 192 g 0 0 0 0 0 0 0 0 0 0 0 0 0 999 951 0 877 999 0 461 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 122 0 0 346
LBD16_RA2_B73_1_m1_EEAD0419_EEADannot_rc_shift12 (LBD16_RA2_B73_1_m1:EEAD0419:EEADannot_rc)	0.904	0.402	1.917	0.923	0.953	105	1075	756	184	119	447.800	; assembly_17 versus LBD16_RA2_B73_1_m1_EEAD0419_EEADannot_rc (LBD16_RA2_B73_1_m1:EEAD0419:EEADannot_rc); m=60/237; ncol2=15; w=0; offset=3; strand=R; shift=12; score= 447.8; ------------CGGCGGCG ; cor=0.904; Ncor=0.402; logoDP=1.917; NsEucl=0.923; NSW=0.953; rcor=105; rNcor=1075; rlogoDP=756; rNsEucl=184; rNSW=119; rank_mean=447.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 4 3 1 8 1 3 15 6 c 0 0 0 0 0 0 0 0 0 0 0 0 89 2 11 89 1 11 74 6 g 0 0 0 0 0 0 0 0 0 0 0 0 5 94 88 2 96 81 7 84 t 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 1 2 5 4 4
ERF003_UN0363.1_JASPAR_rc_shift10 (ERF003:UN0363.1:JASPAR_rc)	0.830	0.593	1.639	0.912	0.922	349	371	777	349	393	447.800	; assembly_17 versus ERF003_UN0363.1_JASPAR_rc (ERF003:UN0363.1:JASPAR_rc); m=61/237; ncol2=13; w=0; offset=1; strand=R; shift=10; score= 447.8; ----------ggCGGCGGaG ; cor=0.830; Ncor=0.593; logoDP=1.639; NsEucl=0.912; NSW=0.922; rcor=349; rNcor=371; rlogoDP=777; rNsEucl=349; rNSW=393; rank_mean=447.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 427 484 50 7 23 119 17 14 1442 95 c 0 0 0 0 0 0 0 0 0 0 166 214 2055 4 52 1796 4 31 463 23 g 0 0 0 0 0 0 0 0 0 0 1095 1288 4 2165 2086 9 2127 2112 19 1992 t 0 0 0 0 0 0 0 0 0 0 489 191 68 1 16 253 29 20 253 67
ERF3.ampDAP_M0074_AthalianaCistrome_shift9 (ERF3.ampDAP:M0074:AthalianaCistrome)	0.812	0.447	5.494	0.918	0.925	440	906	296	255	353	450.000	; assembly_17 versus ERF3.ampDAP_M0074_AthalianaCistrome (ERF3.ampDAP:M0074:AthalianaCistrome); m=62/237; ncol2=20; w=0; offset=0; strand=D; shift=9; score= 450; ---------yGrCGGCGGmg ; cor=0.812; Ncor=0.447; logoDP=5.494; NsEucl=0.918; NSW=0.925; rcor=440; rNcor=906; rlogoDP=296; rNsEucl=255; rNSW=353; rank_mean=450.000; match_rank= a 0 0 0 0 0 0 0 0 0 87 58 182 0 0 2 2 0 51 205 104 c 0 0 0 0 0 0 0 0 0 164 9 5 557 0 2 556 0 87 214 16 g 0 0 0 0 0 0 0 0 0 9 399 376 0 567 563 0 504 398 34 370 t 0 0 0 0 0 0 0 0 0 307 101 4 10 0 0 9 63 31 114 77
AT2G33710_M0018_1.02_CISBP_rc_shift9 (AT2G33710:M0018_1.02:CISBP_rc)	0.790	0.718	0.327	0.914	0.926	554	73	988	306	334	451.000	; assembly_17 versus AT2G33710_M0018_1.02_CISBP_rc (AT2G33710:M0018_1.02:CISBP_rc); m=63/237; ncol2=10; w=0; offset=0; strand=R; shift=9; score= 451; ---------tggCGGCgsc- ; cor=0.790; Ncor=0.718; logoDP=0.327; NsEucl=0.914; NSW=0.926; rcor=554; rNcor=73; rlogoDP=988; rNsEucl=306; rNSW=334; rank_mean=451.000; match_rank= a 0 0 0 0 0 0 0 0 0 15 7 21 3 0 0 7 5 11 18 0 c 0 0 0 0 0 0 0 0 0 24 4 10 90 0 0 92 12 35 39 0 g 0 0 0 0 0 0 0 0 0 13 66 52 3 96 100 0 61 44 24 0 t 0 0 0 0 0 0 0 0 0 48 23 17 4 4 0 1 22 10 19 0
ERF112_MA1002.1_JASPAR_rc_shift9 (ERF112:MA1002.1:JASPAR_rc)	0.789	0.717	0.325	0.914	0.927	561	77	991	304	333	453.200	; assembly_17 versus ERF112_MA1002.1_JASPAR_rc (ERF112:MA1002.1:JASPAR_rc); m=64/237; ncol2=10; w=0; offset=0; strand=R; shift=9; score= 453.2; ---------tggCGGCgsc- ; cor=0.789; Ncor=0.717; logoDP=0.325; NsEucl=0.914; NSW=0.927; rcor=561; rNcor=77; rlogoDP=991; rNsEucl=304; rNSW=333; rank_mean=453.200; match_rank= a 0 0 0 0 0 0 0 0 0 150 67 211 33 3 1 72 54 118 180 0 c 0 0 0 0 0 0 0 0 0 240 37 101 903 4 2 913 117 346 392 0 g 0 0 0 0 0 0 0 0 0 133 661 518 28 951 997 1 605 436 240 0 t 0 0 0 0 0 0 0 0 0 478 236 171 36 42 0 15 223 100 189 0
ERF11.DAP_M0039_AthalianaCistrome_rc_shift9 (ERF11.DAP:M0039:AthalianaCistrome_rc)	0.813	0.596	1.630	0.915	0.921	435	363	779	288	403	453.600	; assembly_17 versus ERF11.DAP_M0039_AthalianaCistrome_rc (ERF11.DAP:M0039:AthalianaCistrome_rc); m=65/237; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 453.6; ---------tgrCGGCGGmG ; cor=0.813; Ncor=0.596; logoDP=1.630; NsEucl=0.915; NSW=0.921; rcor=435; rNcor=363; rlogoDP=779; rNsEucl=288; rNSW=403; rank_mean=453.600; match_rank= a 0 0 0 0 0 0 0 0 0 124 106 230 16 0 13 0 0 14 191 38 c 0 0 0 0 0 0 0 0 0 137 24 8 541 0 9 571 1 54 319 4 g 0 0 0 0 0 0 0 0 0 20 353 351 0 596 574 0 584 524 3 501 t 0 0 0 0 0 0 0 0 0 315 113 7 39 0 0 25 11 4 83 53
ERF9_MA1257.2_JASPAR_shift1 (ERF9:MA1257.2:JASPAR)	0.811	0.469	5.110	0.917	0.924	453	828	361	265	370	455.400	; assembly_17 versus ERF9_MA1257.2_JASPAR (ERF9:MA1257.2:JASPAR); m=66/237; ncol2=19; w=-8; offset=-8; strand=D; shift=1; score= 455.4; -ggcggmkryGrCGGCGGmG ; cor=0.811; Ncor=0.469; logoDP=5.110; NsEucl=0.917; NSW=0.924; rcor=453; rNcor=828; rlogoDP=361; rNsEucl=265; rNSW=370; rank_mean=455.400; match_rank= a 0 89 109 106 83 106 143 104 161 111 73 167 26 0 10 16 4 31 204 52 c 0 24 50 265 32 63 239 32 37 167 6 15 496 0 0 493 0 34 253 8 g 0 353 336 69 343 333 39 269 270 17 383 360 0 551 544 0 514 483 6 439 t 0 89 60 115 97 53 134 150 87 260 93 13 33 4 1 46 37 7 92 56
ERF069_MA0997.1_JASPAR_rc_shift9 (ERF069:MA0997.1:JASPAR_rc)	0.794	0.650	1.221	0.909	0.925	533	192	816	412	355	461.600	; assembly_17 versus ERF069_MA0997.1_JASPAR_rc (ERF069:MA0997.1:JASPAR_rc); m=67/237; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 461.6; ---------tggCGGCgs-- ; cor=0.794; Ncor=0.650; logoDP=1.221; NsEucl=0.909; NSW=0.925; rcor=533; rNcor=192; rlogoDP=816; rNsEucl=412; rNSW=355; rank_mean=461.600; match_rank= a 0 0 0 0 0 0 0 0 0 209 180 230 0 146 24 0 157 197 0 0 c 0 0 0 0 0 0 0 0 0 231 193 212 820 76 86 982 175 315 0 0 g 0 0 0 0 0 0 0 0 0 209 404 419 0 680 828 0 471 294 0 0 t 0 0 0 0 0 0 0 0 0 351 224 138 179 98 61 18 197 193 0 0
PK19363.1_M0004_1.02_CISBP_rc_shift9 (PK19363.1:M0004_1.02:CISBP_rc)	0.819	0.596	3.308	0.902	0.923	404	366	604	563	384	464.200	; assembly_17 versus PK19363.1_M0004_1.02_CISBP_rc (PK19363.1:M0004_1.02:CISBP_rc); m=68/237; ncol2=8; w=0; offset=0; strand=R; shift=9; score= 464.2; ---------yGgCGGCG--- ; cor=0.819; Ncor=0.596; logoDP=3.308; NsEucl=0.902; NSW=0.923; rcor=404; rNcor=366; rlogoDP=604; rNsEucl=563; rNSW=384; rank_mean=464.200; match_rank= a 0 0 0 0 0 0 0 0 0 14 6 18 0 0 0 1 5 0 0 0 c 0 0 0 0 0 0 0 0 0 30 1 14 99 1 11 95 8 0 0 0 g 0 0 0 0 0 0 0 0 0 7 77 63 1 97 87 1 72 0 0 0 t 0 0 0 0 0 0 0 0 0 49 16 5 0 2 2 3 15 0 0 0
ESE3_MA1236.1_JASPAR_shift3 (ESE3:MA1236.1:JASPAR)	0.803	0.465	5.232	0.916	0.923	485	840	342	274	382	464.600	; assembly_17 versus ESE3_MA1236.1_JASPAR (ESE3:MA1236.1:JASPAR); m=69/237; ncol2=19; w=-6; offset=-6; strand=D; shift=3; score= 464.6; ---cgghgghggCGGyGGmG ; cor=0.803; Ncor=0.465; logoDP=5.232; NsEucl=0.916; NSW=0.923; rcor=485; rNcor=840; rlogoDP=342; rNsEucl=274; rNSW=382; rank_mean=464.600; match_rank= a 0 0 0 148 96 113 186 146 114 178 90 146 12 0 1 29 0 15 270 46 c 0 0 0 219 48 65 185 26 30 153 7 17 543 0 3 400 0 45 211 9 g 0 0 0 100 362 368 64 307 331 28 374 385 0 596 592 0 587 524 19 501 t 0 0 0 129 90 50 161 117 121 237 125 48 41 0 0 167 9 12 96 40
LBD13_MA2021.1_JASPAR_rc_shift8 (LBD13:MA2021.1:JASPAR_rc)	0.761	0.644	3.596	0.912	0.915	713	210	572	347	481	464.600	; assembly_17 versus LBD13_MA2021.1_JASPAR_rc (LBD13:MA2021.1:JASPAR_rc); m=70/237; ncol2=13; w=-1; offset=-1; strand=R; shift=8; score= 464.6; --------dhkaCGGTGGag ; cor=0.761; Ncor=0.644; logoDP=3.596; NsEucl=0.912; NSW=0.915; rcor=713; rNcor=210; rlogoDP=572; rNsEucl=347; rNSW=481; rank_mean=464.600; match_rank= a 0 0 0 0 0 0 0 0 267 329 221 628 18 8 9 72 17 39 635 198 c 0 0 0 0 0 0 0 0 148 306 112 143 980 16 8 168 4 20 145 116 g 0 0 0 0 0 0 0 0 370 125 369 227 11 1021 1031 6 1018 979 44 494 t 0 0 0 0 0 0 0 0 270 295 353 57 46 10 7 809 16 17 231 247
Zm00001d005892_MA1819.1_JASPAR_rc_shift10 (Zm00001d005892:MA1819.1:JASPAR_rc)	0.797	0.613	3.507	0.907	0.914	516	297	579	449	488	465.800	; assembly_17 versus Zm00001d005892_MA1819.1_JASPAR_rc (Zm00001d005892:MA1819.1:JASPAR_rc); m=71/237; ncol2=12; w=0; offset=1; strand=R; shift=10; score= 465.8; ----------ggCGGCGGCG ; cor=0.797; Ncor=0.613; logoDP=3.507; NsEucl=0.907; NSW=0.914; rcor=516; rNcor=297; rlogoDP=579; rNsEucl=449; rNSW=488; rank_mean=465.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 3917 4805 990 748 1310 722 670 1200 765 872 c 0 0 0 0 0 0 0 0 0 0 6580 5911 24113 990 1696 25421 917 1794 25046 1309 g 0 0 0 0 0 0 0 0 0 0 13547 12889 1029 25022 23482 435 25251 23527 767 24431 t 0 0 0 0 0 0 0 0 0 0 3329 3768 1241 613 885 795 535 852 795 761
AT1G22985_M0007_1.02_CISBP_rc_shift9 (AT1G22985:M0007_1.02:CISBP_rc)	0.790	0.647	1.223	0.908	0.924	548	200	815	424	372	471.800	; assembly_17 versus AT1G22985_M0007_1.02_CISBP_rc (AT1G22985:M0007_1.02:CISBP_rc); m=72/237; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 471.8; ---------tggCGGCgs-- ; cor=0.790; Ncor=0.647; logoDP=1.223; NsEucl=0.908; NSW=0.924; rcor=548; rNcor=200; rlogoDP=815; rNsEucl=424; rNSW=372; rank_mean=471.800; match_rank= a 0 0 0 0 0 0 0 0 0 21 19 23 0 15 2 0 16 20 0 0 c 0 0 0 0 0 0 0 0 0 23 19 21 82 7 9 98 18 32 0 0 g 0 0 0 0 0 0 0 0 0 21 40 42 0 68 83 0 46 29 0 0 t 0 0 0 0 0 0 0 0 0 35 22 14 18 10 6 2 20 19 0 0
AT2G33710_MA1245.1_JASPAR_rc_shift9 (AT2G33710:MA1245.1:JASPAR_rc)	0.807	0.592	1.504	0.914	0.919	469	382	791	307	433	476.400	; assembly_17 versus AT2G33710_MA1245.1_JASPAR_rc (AT2G33710:MA1245.1:JASPAR_rc); m=73/237; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 476.4; ---------ykrCGGCGGmG ; cor=0.807; Ncor=0.592; logoDP=1.504; NsEucl=0.914; NSW=0.919; rcor=469; rNcor=382; rlogoDP=791; rNsEucl=307; rNSW=433; rank_mean=476.400; match_rank= a 0 0 0 0 0 0 0 0 0 123 67 192 1 0 0 7 0 12 160 32 c 0 0 0 0 0 0 0 0 0 156 17 11 551 0 11 551 3 112 350 13 g 0 0 0 0 0 0 0 0 0 11 350 372 0 583 572 0 573 456 8 475 t 0 0 0 0 0 0 0 0 0 293 149 8 31 0 0 25 7 3 65 63
ATERF6_M0027_1.02_CISBP_shift8 (ATERF6:M0027_1.02:CISBP)	0.802	0.601	5.074	0.898	0.907	496	343	374	628	563	480.800	; assembly_17 versus ATERF6_M0027_1.02_CISBP (ATERF6:M0027_1.02:CISBP); m=74/237; ncol2=10; w=-1; offset=-1; strand=D; shift=8; score= 480.8; --------mtGCCGGCgb-- ; cor=0.802; Ncor=0.601; logoDP=5.074; NsEucl=0.898; NSW=0.907; rcor=496; rNcor=343; rlogoDP=374; rNsEucl=628; rNSW=563; rank_mean=480.800; match_rank= a 0 0 0 0 0 0 0 0 29 8 0 0 0 0 0 0 16 17 0 0 c 0 0 0 0 0 0 0 0 35 22 0 100 100 0 9 100 16 28 0 0 g 0 0 0 0 0 0 0 0 18 16 100 0 0 100 91 0 53 26 0 0 t 0 0 0 0 0 0 0 0 18 54 0 0 0 0 0 0 15 29 0 0
ERF6_MA1006.1_JASPAR_shift8 (ERF6:MA1006.1:JASPAR)	0.801	0.601	5.078	0.898	0.907	498	345	370	631	564	481.600	; assembly_17 versus ERF6_MA1006.1_JASPAR (ERF6:MA1006.1:JASPAR); m=75/237; ncol2=10; w=-1; offset=-1; strand=D; shift=8; score= 481.6; --------mtGCCGGCgb-- ; cor=0.801; Ncor=0.601; logoDP=5.078; NsEucl=0.898; NSW=0.907; rcor=498; rNcor=345; rlogoDP=370; rNsEucl=631; rNSW=564; rank_mean=481.600; match_rank= a 0 0 0 0 0 0 0 0 291 78 0 0 0 0 0 0 159 172 0 0 c 0 0 0 0 0 0 0 0 352 221 0 1000 1000 0 88 1000 156 278 0 0 g 0 0 0 0 0 0 0 0 179 166 1000 0 0 1000 912 0 530 257 0 0 t 0 0 0 0 0 0 0 0 179 535 0 0 0 0 0 0 155 294 0 0
ERF1_M0025_1.02_CISBP_rc_shift11 (ERF1:M0025_1.02:CISBP_rc)	0.812	0.609	4.047	0.899	0.909	442	310	511	611	540	482.800	; assembly_17 versus ERF1_M0025_1.02_CISBP_rc (ERF1:M0025_1.02:CISBP_rc); m=76/237; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 482.8; -----------ryGGCGGCk ; cor=0.812; Ncor=0.609; logoDP=4.047; NsEucl=0.899; NSW=0.909; rcor=442; rNcor=310; rlogoDP=511; rNsEucl=611; rNSW=540; rank_mean=482.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 35 7 0 0 0 0 0 0 10 c 0 0 0 0 0 0 0 0 0 0 0 24 50 0 0 100 0 0 100 10 g 0 0 0 0 0 0 0 0 0 0 0 26 7 100 100 0 100 100 0 50 t 0 0 0 0 0 0 0 0 0 0 0 15 36 0 0 0 0 0 0 30
ERF9_MA1257.1_JASPAR_shift0 (ERF9:MA1257.1:JASPAR)	0.811	0.425	5.110	0.917	0.924	453	981	361	265	370	486.000	; assembly_17 versus ERF9_MA1257.1_JASPAR (ERF9:MA1257.1:JASPAR); m=77/237; ncol2=21; w=-9; offset=-9; strand=D; shift=0; score= 486; yggcggmkryGrCGGCGGmG ; cor=0.811; Ncor=0.425; logoDP=5.110; NsEucl=0.917; NSW=0.924; rcor=453; rNcor=981; rlogoDP=361; rNsEucl=265; rNSW=370; rank_mean=486.000; match_rank= a 90 89 109 106 83 106 143 104 161 111 73 167 26 0 10 16 4 31 204 52 c 246 24 50 265 32 63 239 32 37 167 6 15 496 0 0 493 0 34 253 8 g 79 353 336 69 343 333 39 269 270 17 383 360 0 551 544 0 514 483 6 439 t 140 89 60 115 97 53 134 150 87 260 93 13 33 4 1 46 37 7 92 56
ERF8.DAP_M0044_AthalianaCistrome_rc_shift10 (ERF8.DAP:M0044:AthalianaCistrome_rc)	0.832	0.520	1.129	0.913	0.925	343	640	831	316	354	496.800	; assembly_17 versus ERF8.DAP_M0044_AthalianaCistrome_rc (ERF8.DAP:M0044:AthalianaCistrome_rc); m=78/237; ncol2=15; w=0; offset=1; strand=R; shift=10; score= 496.8; ----------krCGGCGGmG ; cor=0.832; Ncor=0.520; logoDP=1.129; NsEucl=0.913; NSW=0.925; rcor=343; rNcor=640; rlogoDP=831; rNsEucl=316; rNSW=354; rank_mean=496.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 127 211 0 0 34 5 0 2 156 35 c 0 0 0 0 0 0 0 0 0 0 39 33 508 0 0 570 1 32 349 7 g 0 0 0 0 0 0 0 0 0 0 274 314 0 587 555 0 587 545 0 492 t 0 0 0 0 0 0 0 0 0 0 149 31 81 2 0 14 1 10 84 55
At2g33710.ampDAP_M0021_AthalianaCistrome_rc_shift4 (At2g33710.ampDAP:M0021:AthalianaCistrome_rc)	0.809	0.495	2.305	0.918	0.927	460	731	730	246	328	499.000	; assembly_17 versus At2g33710.ampDAP_M0021_AthalianaCistrome_rc (At2g33710.ampDAP:M0021:AthalianaCistrome_rc); m=79/237; ncol2=18; w=-5; offset=-5; strand=R; shift=4; score= 499; ----krmdrwkrCGGCGGCG ; cor=0.809; Ncor=0.495; logoDP=2.305; NsEucl=0.918; NSW=0.927; rcor=460; rNcor=731; rlogoDP=730; rNsEucl=246; rNSW=328; rank_mean=499.000; match_rank= a 0 0 0 0 131 166 205 169 219 177 146 262 22 0 24 0 0 14 111 25 c 0 0 0 0 65 102 204 55 42 129 25 34 470 1 6 596 2 109 451 29 g 0 0 0 0 249 246 61 206 221 18 241 265 3 574 566 0 580 477 10 463 t 0 0 0 0 155 86 130 170 118 276 188 39 105 25 4 4 18 0 28 83
ERF8.ampDAP_M0046_AthalianaCistrome_shift5 (ERF8.ampDAP:M0046:AthalianaCistrome)	0.783	0.479	5.455	0.912	0.915	592	788	303	346	480	501.800	; assembly_17 versus ERF8.ampDAP_M0046_AthalianaCistrome (ERF8.ampDAP:M0046:AthalianaCistrome); m=80/237; ncol2=18; w=-4; offset=-4; strand=D; shift=5; score= 501.8; -----rwwwyGGCGGCGghg ; cor=0.783; Ncor=0.479; logoDP=5.455; NsEucl=0.912; NSW=0.915; rcor=592; rNcor=788; rlogoDP=303; rNsEucl=346; rNSW=480; rank_mean=501.800; match_rank= a 0 0 0 0 0 201 256 257 292 68 19 146 0 0 0 1 3 73 212 144 c 0 0 0 0 0 90 104 34 30 160 0 3 588 0 0 582 0 135 165 37 g 0 0 0 0 0 180 66 102 110 0 499 414 0 585 588 0 517 319 60 279 t 0 0 0 0 0 117 162 195 156 360 70 25 0 3 0 5 68 61 151 128
ERF11.ampDAP_M0072_AthalianaCistrome_shift4 (ERF11.ampDAP:M0072:AthalianaCistrome)	0.793	0.436	5.600	0.913	0.917	536	937	277	323	451	504.800	; assembly_17 versus ERF11.ampDAP_M0072_AthalianaCistrome (ERF11.ampDAP:M0072:AthalianaCistrome); m=81/237; ncol2=20; w=-5; offset=-5; strand=D; shift=4; score= 504.8; ----rrwwayGrCGGCGghg ; cor=0.793; Ncor=0.436; logoDP=5.600; NsEucl=0.913; NSW=0.917; rcor=536; rNcor=937; rlogoDP=277; rNsEucl=323; rNSW=451; rank_mean=504.800; match_rank= a 0 0 0 0 156 187 209 234 281 75 30 158 0 0 0 0 5 54 171 106 c 0 0 0 0 76 74 124 44 36 147 0 3 569 0 0 568 0 123 193 32 g 0 0 0 0 216 209 79 123 138 0 466 383 0 568 569 0 508 349 53 326 t 0 0 0 0 121 99 157 168 114 347 73 25 0 1 0 1 56 43 152 105
ERF11_MA1001.1_JASPAR_rc_shift8 (ERF11:MA1001.1:JASPAR_rc)	0.789	0.592	1.415	0.908	0.923	558	379	795	429	380	508.200	; assembly_17 versus ERF11_MA1001.1_JASPAR_rc (ERF11:MA1001.1:JASPAR_rc); m=82/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 508.2; --------wtkrCGGCgs-- ; cor=0.789; Ncor=0.592; logoDP=1.415; NsEucl=0.908; NSW=0.923; rcor=558; rNcor=379; rlogoDP=795; rNsEucl=429; rNSW=380; rank_mean=508.200; match_rank= a 0 0 0 0 0 0 0 0 324 233 175 273 31 99 85 4 169 165 0 0 c 0 0 0 0 0 0 0 0 204 181 77 154 828 51 55 887 123 316 0 0 g 0 0 0 0 0 0 0 0 196 162 490 383 10 704 835 0 494 313 0 0 t 0 0 0 0 0 0 0 0 276 424 258 190 131 145 25 109 213 206 0 0
ESE1_MA1264.1_JASPAR_shift9 (ESE1:MA1264.1:JASPAR)	0.767	0.562	5.292	0.907	0.905	686	498	333	453	593	512.600	; assembly_17 versus ESE1_MA1264.1_JASPAR (ESE1:MA1264.1:JASPAR); m=83/237; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 512.6; ---------ygryGGCGGCG ; cor=0.767; Ncor=0.562; logoDP=5.292; NsEucl=0.907; NSW=0.905; rcor=686; rNcor=498; rlogoDP=333; rNsEucl=453; rNSW=593; rank_mean=512.600; match_rank= a 0 0 0 0 0 0 0 0 0 124 137 189 78 4 55 3 0 0 13 5 c 0 0 0 0 0 0 0 0 0 213 59 45 335 0 2 570 0 4 525 6 g 0 0 0 0 0 0 0 0 0 47 277 327 2 587 534 0 591 587 0 503 t 0 0 0 0 0 0 0 0 0 207 118 30 176 0 0 18 0 0 53 77
ERF11_M0009_1.02_CISBP_rc_shift8 (ERF11:M0009_1.02:CISBP_rc)	0.786	0.590	1.409	0.907	0.923	574	391	796	443	385	517.800	; assembly_17 versus ERF11_M0009_1.02_CISBP_rc (ERF11:M0009_1.02:CISBP_rc); m=84/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 517.8; --------wtkrCGGCgs-- ; cor=0.786; Ncor=0.590; logoDP=1.409; NsEucl=0.907; NSW=0.923; rcor=574; rNcor=391; rlogoDP=796; rNsEucl=443; rNSW=385; rank_mean=517.800; match_rank= a 0 0 0 0 0 0 0 0 32 23 17 27 3 10 9 0 17 17 0 0 c 0 0 0 0 0 0 0 0 20 18 8 15 83 5 6 89 13 31 0 0 g 0 0 0 0 0 0 0 0 20 17 49 38 1 70 83 0 49 31 0 0 t 0 0 0 0 0 0 0 0 28 42 26 20 13 15 2 11 21 21 0 0
GRF4_EEAD0016_EEADannot_rc_shift9 (GRF4:EEAD0016:EEADannot_rc)	0.758	0.695	2.866	0.906	0.902	723	113	662	474	621	518.600	; assembly_17 versus GRF4_EEAD0016_EEADannot_rc (GRF4:EEAD0016:EEADannot_rc); m=85/237; ncol2=12; w=0; offset=0; strand=R; shift=9; score= 518.6; ---------cgGCGGCGGCg ; cor=0.758; Ncor=0.695; logoDP=2.866; NsEucl=0.906; NSW=0.902; rcor=723; rNcor=113; rlogoDP=662; rNsEucl=474; rNSW=621; rank_mean=518.600; match_rank= a 0 0 0 0 0 0 0 0 0 111 113 32 33 28 17 19 33 24 24 111 c 0 0 0 0 0 0 0 0 0 441 159 38 722 32 21 741 28 35 704 137 g 0 0 0 0 0 0 0 0 0 147 447 697 15 715 738 13 707 723 32 463 t 0 0 0 0 0 0 0 0 0 97 77 29 26 21 20 23 28 14 36 85
ERF096_MA0998.2_JASPAR_rc_shift13 (ERF096:MA0998.2:JASPAR_rc)	0.867	0.473	2.675	0.897	0.936	197	818	697	657	225	518.800	; assembly_17 versus ERF096_MA0998.2_JASPAR_rc (ERF096:MA0998.2:JASPAR_rc); m=86/237; ncol2=6; w=0; offset=4; strand=R; shift=13; score= 518.8; -------------GgCGGC- ; cor=0.867; Ncor=0.473; logoDP=2.675; NsEucl=0.897; NSW=0.936; rcor=197; rNcor=818; rlogoDP=697; rNsEucl=657; rNSW=225; rank_mean=518.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 38 149 19 32 27 13 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 24 131 928 21 36 939 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 903 591 10 850 905 13 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 35 129 43 97 32 34 0
CRF4.ampDAP_M0079_AthalianaCistrome_shift9 (CRF4.ampDAP:M0079:AthalianaCistrome)	0.767	0.563	5.409	0.905	0.900	681	491	309	498	645	524.800	; assembly_17 versus CRF4.ampDAP_M0079_AthalianaCistrome (CRF4.ampDAP:M0079:AthalianaCistrome); m=87/237; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 524.8; ---------ygRCGGCGGCG ; cor=0.767; Ncor=0.563; logoDP=5.409; NsEucl=0.905; NSW=0.900; rcor=681; rNcor=491; rlogoDP=309; rNsEucl=498; rNSW=645; rank_mean=524.800; match_rank= a 0 0 0 0 0 0 0 0 0 138 102 158 14 8 10 4 0 1 100 17 c 0 0 0 0 0 0 0 0 0 192 36 1 447 0 4 561 0 33 460 9 g 0 0 0 0 0 0 0 0 0 19 382 420 0 585 586 0 600 566 0 530 t 0 0 0 0 0 0 0 0 0 251 80 21 139 7 0 35 0 0 40 44
ERF3_M0011_1.02_CISBP_rc_shift9 (ERF3:M0011_1.02:CISBP_rc)	0.809	0.588	3.810	0.894	0.911	463	396	543	709	520	526.200	; assembly_17 versus ERF3_M0011_1.02_CISBP_rc (ERF3:M0011_1.02:CISBP_rc); m=88/237; ncol2=8; w=0; offset=0; strand=R; shift=9; score= 526.2; ---------yGgCGGCG--- ; cor=0.809; Ncor=0.588; logoDP=3.810; NsEucl=0.894; NSW=0.911; rcor=463; rNcor=396; rlogoDP=543; rNsEucl=709; rNSW=520; rank_mean=526.200; match_rank= a 0 0 0 0 0 0 0 0 0 12 2 11 0 0 0 0 8 0 0 0 c 0 0 0 0 0 0 0 0 0 28 0 19 99 1 11 99 8 0 0 0 g 0 0 0 0 0 0 0 0 0 2 90 64 0 99 89 0 76 0 0 0 t 0 0 0 0 0 0 0 0 0 58 8 6 1 0 0 1 8 0 0 0
Rap2.6L_M0036_1.02_CISBP_rc_shift8 (Rap2.6L:M0036_1.02:CISBP_rc)	0.784	0.588	1.240	0.907	0.922	583	394	811	456	398	528.400	; assembly_17 versus Rap2.6L_M0036_1.02_CISBP_rc (Rap2.6L:M0036_1.02:CISBP_rc); m=89/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 528.4; --------wtkrCGGCks-- ; cor=0.784; Ncor=0.588; logoDP=1.240; NsEucl=0.907; NSW=0.922; rcor=583; rNcor=394; rlogoDP=811; rNsEucl=456; rNSW=398; rank_mean=528.400; match_rank= a 0 0 0 0 0 0 0 0 31 21 17 29 6 5 5 1 13 20 0 0 c 0 0 0 0 0 0 0 0 19 19 9 12 75 5 14 89 17 27 0 0 g 0 0 0 0 0 0 0 0 21 21 46 41 8 80 77 3 44 35 0 0 t 0 0 0 0 0 0 0 0 29 39 28 18 11 10 4 7 26 18 0 0
CRF3_M0041_1.02_CISBP_rc_shift9 (CRF3:M0041_1.02:CISBP_rc)	0.775	0.634	1.000	0.905	0.919	646	229	854	489	434	530.400	; assembly_17 versus CRF3_M0041_1.02_CISBP_rc (CRF3:M0041_1.02:CISBP_rc); m=90/237; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 530.4; ---------tggcGGCgs-- ; cor=0.775; Ncor=0.634; logoDP=1.000; NsEucl=0.905; NSW=0.919; rcor=646; rNcor=229; rlogoDP=854; rNsEucl=489; rNSW=434; rank_mean=530.400; match_rank= a 0 0 0 0 0 0 0 0 0 21 19 24 11 7 5 0 14 20 0 0 c 0 0 0 0 0 0 0 0 0 21 13 14 62 6 5 94 16 30 0 0 g 0 0 0 0 0 0 0 0 0 24 46 42 10 78 88 0 48 31 0 0 t 0 0 0 0 0 0 0 0 0 34 22 20 17 9 2 6 22 19 0 0
ERF3_MA1005.1_JASPAR_rc_shift9 (ERF3:MA1005.1:JASPAR_rc)	0.806	0.586	3.776	0.894	0.910	476	406	550	710	525	533.400	; assembly_17 versus ERF3_MA1005.1_JASPAR_rc (ERF3:MA1005.1:JASPAR_rc); m=91/237; ncol2=8; w=0; offset=0; strand=R; shift=9; score= 533.4; ---------yGgCGGCG--- ; cor=0.806; Ncor=0.586; logoDP=3.776; NsEucl=0.894; NSW=0.910; rcor=476; rNcor=406; rlogoDP=550; rNsEucl=710; rNSW=525; rank_mean=533.400; match_rank= a 0 0 0 0 0 0 0 0 0 116 16 114 0 0 0 0 80 0 0 0 c 0 0 0 0 0 0 0 0 0 279 0 186 985 14 114 985 80 0 0 0 g 0 0 0 0 0 0 0 0 0 23 904 643 0 985 885 0 760 0 0 0 t 0 0 0 0 0 0 0 0 0 581 79 57 14 0 0 14 80 0 0 0
ERF024Ved_EEAD0158_EEADannot_shift9 (ERF024Ved:EEAD0158:EEADannot)	0.741	0.544	4.853	0.910	0.911	806	558	413	387	511	535.000	; assembly_17 versus ERF024Ved_EEAD0158_EEADannot (ERF024Ved:EEAD0158:EEADannot); m=92/237; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 535; ---------crryGkCGGYr ; cor=0.741; Ncor=0.544; logoDP=4.853; NsEucl=0.910; NSW=0.911; rcor=806; rNcor=558; rlogoDP=413; rNsEucl=387; rNSW=511; rank_mean=535.000; match_rank= a 0 0 0 0 0 0 0 0 0 24 26 28 2 0 22 1 0 5 3 28 c 0 0 0 0 0 0 0 0 0 39 7 10 56 0 0 99 0 0 68 8 g 0 0 0 0 0 0 0 0 0 17 54 41 0 100 36 0 100 95 2 58 t 0 0 0 0 0 0 0 0 0 20 13 21 42 0 42 0 0 0 27 6
ERF8_MA0994.2_JASPAR_shift6 (ERF8:MA0994.2:JASPAR)	0.785	0.479	5.297	0.908	0.907	581	785	331	422	561	536.000	; assembly_17 versus ERF8_MA0994.2_JASPAR (ERF8:MA0994.2:JASPAR); m=93/237; ncol2=18; w=-3; offset=-3; strand=D; shift=6; score= 536; ------hrrtgrCGGCGGCG ; cor=0.785; Ncor=0.479; logoDP=5.297; NsEucl=0.908; NSW=0.907; rcor=581; rNcor=785; rlogoDP=331; rNsEucl=422; rNSW=561; rank_mean=536.000; match_rank= a 0 0 0 0 0 0 195 198 249 116 103 426 32 3 16 11 6 16 108 21 c 0 0 0 0 0 0 222 79 91 180 50 29 649 3 9 701 2 46 537 9 g 0 0 0 0 0 0 125 286 273 33 491 252 5 728 714 0 728 667 11 674 t 0 0 0 0 0 0 201 180 130 414 99 36 57 9 4 31 7 14 87 39
ERF091_MA1228.2_JASPAR_shift8 (ERF091:MA1228.2:JASPAR)	0.747	0.632	5.345	0.900	0.889	783	232	322	605	767	541.800	; assembly_17 versus ERF091_MA1228.2_JASPAR (ERF091:MA1228.2:JASPAR); m=94/237; ncol2=13; w=-1; offset=-1; strand=D; shift=8; score= 541.8; --------ryGGCGGCGGmg ; cor=0.747; Ncor=0.632; logoDP=5.345; NsEucl=0.900; NSW=0.889; rcor=783; rNcor=232; rlogoDP=322; rNsEucl=605; rNSW=767; rank_mean=541.800; match_rank= a 0 0 0 0 0 0 0 0 187 78 0 34 0 0 0 13 6 85 179 91 c 0 0 0 0 0 0 0 0 52 289 0 0 526 0 0 505 7 69 205 25 g 0 0 0 0 0 0 0 0 263 0 534 503 0 537 537 0 472 378 32 337 t 0 0 0 0 0 0 0 0 35 170 3 0 11 0 0 19 52 5 121 84
ERF4.ampDAP_M0033_AthalianaCistrome_shift4 (ERF4.ampDAP:M0033:AthalianaCistrome)	0.783	0.430	5.725	0.910	0.911	594	954	264	388	512	542.400	; assembly_17 versus ERF4.ampDAP_M0033_AthalianaCistrome (ERF4.ampDAP:M0033:AthalianaCistrome); m=95/237; ncol2=20; w=-5; offset=-5; strand=D; shift=4; score= 542.4; ----rrwwayGRCGGCGgmg ; cor=0.783; Ncor=0.430; logoDP=5.725; NsEucl=0.910; NSW=0.911; rcor=594; rNcor=954; rlogoDP=264; rNsEucl=388; rNSW=512; rank_mean=542.400; match_rank= a 0 0 0 0 149 194 242 246 299 71 20 156 1 0 1 0 0 45 228 135 c 0 0 0 0 92 88 111 28 24 153 1 0 581 0 0 582 0 145 153 39 g 0 0 0 0 233 203 65 110 122 4 516 406 0 582 581 0 538 342 76 309 t 0 0 0 0 108 97 164 198 137 354 45 20 0 0 0 0 44 50 125 99
ERF4_MA0992.2_JASPAR_rc_shift7 (ERF4:MA0992.2:JASPAR_rc)	0.781	0.601	3.755	0.901	0.902	613	349	553	574	624	542.600	; assembly_17 versus ERF4_MA0992.2_JASPAR_rc (ERF4:MA0992.2:JASPAR_rc); m=96/237; ncol2=12; w=-2; offset=-2; strand=R; shift=7; score= 542.6; -------drTGrCGGCGgm- ; cor=0.781; Ncor=0.601; logoDP=3.755; NsEucl=0.901; NSW=0.902; rcor=613; rNcor=349; rlogoDP=553; rNsEucl=574; rNSW=624; rank_mean=542.600; match_rank= a 0 0 0 0 0 0 0 305 363 86 56 627 8 1 17 19 5 126 319 0 c 0 0 0 0 0 0 0 113 101 91 25 13 1006 2 9 979 2 165 368 0 g 0 0 0 0 0 0 0 287 306 19 900 349 0 1015 992 1 1005 644 109 0 t 0 0 0 0 0 0 0 318 253 827 42 34 9 5 5 24 11 88 227 0
ERF4.DAP_M0047_AthalianaCistrome_rc_shift6 (ERF4.DAP:M0047:AthalianaCistrome_rc)	0.787	0.577	2.832	0.907	0.905	568	433	671	454	594	544.000	; assembly_17 versus ERF4.DAP_M0047_AthalianaCistrome_rc (ERF4.DAP:M0047:AthalianaCistrome_rc); m=97/237; ncol2=15; w=-3; offset=-3; strand=R; shift=6; score= 544; ------wdryGGCGGCGGmG ; cor=0.787; Ncor=0.577; logoDP=2.832; NsEucl=0.907; NSW=0.905; rcor=568; rNcor=433; rlogoDP=671; rNsEucl=454; rNSW=594; rank_mean=544.000; match_rank= a 0 0 0 0 0 0 231 216 260 71 12 128 0 1 0 3 2 21 237 90 c 0 0 0 0 0 0 123 26 25 170 2 0 596 0 1 591 0 103 195 21 g 0 0 0 0 0 0 71 153 182 3 531 463 0 595 596 0 583 454 53 407 t 0 0 0 0 0 0 172 202 130 353 52 6 1 1 0 3 12 19 112 79
ATERF-8_M0012_1.02_CISBP_rc_shift7 (ATERF-8:M0012_1.02:CISBP_rc)	0.827	0.509	0.197	0.910	0.936	357	687	1061	383	234	544.400	; assembly_17 versus ATERF-8_M0012_1.02_CISBP_rc (ATERF-8:M0012_1.02:CISBP_rc); m=98/237; ncol2=10; w=-2; offset=-2; strand=R; shift=7; score= 544.4; -------wwtggCGGCg--- ; cor=0.827; Ncor=0.509; logoDP=0.197; NsEucl=0.910; NSW=0.936; rcor=357; rNcor=687; rlogoDP=1061; rNsEucl=383; rNSW=234; rank_mean=544.400; match_rank= a 0 0 0 0 0 0 0 31 34 19 14 24 3 5 2 0 13 0 0 0 c 0 0 0 0 0 0 0 19 18 18 6 15 85 3 6 96 10 0 0 0 g 0 0 0 0 0 0 0 21 21 18 60 46 5 81 91 0 57 0 0 0 t 0 0 0 0 0 0 0 29 27 45 20 15 7 11 1 4 20 0 0 0
ERF8_MA0994.1_JASPAR_rc_shift7 (ERF8:MA0994.1:JASPAR_rc)	0.827	0.509	0.192	0.910	0.936	358	688	1065	382	233	545.200	; assembly_17 versus ERF8_MA0994.1_JASPAR_rc (ERF8:MA0994.1:JASPAR_rc); m=99/237; ncol2=10; w=-2; offset=-2; strand=R; shift=7; score= 545.2; -------wwtggCGGCg--- ; cor=0.827; Ncor=0.509; logoDP=0.192; NsEucl=0.910; NSW=0.936; rcor=358; rNcor=688; rlogoDP=1065; rNsEucl=382; rNSW=233; rank_mean=545.200; match_rank= a 0 0 0 0 0 0 0 311 336 192 139 243 31 48 19 3 129 0 0 0 c 0 0 0 0 0 0 0 192 185 184 58 151 841 31 64 959 97 0 0 0 g 0 0 0 0 0 0 0 206 206 175 605 452 53 807 908 0 572 0 0 0 t 0 0 0 0 0 0 0 290 273 449 197 154 75 114 9 38 202 0 0 0
ERF11_MA1001.2_JASPAR_rc_shift7 (ERF11:MA1001.2:JASPAR_rc)	0.776	0.597	3.616	0.901	0.903	638	360	569	568	615	550.000	; assembly_17 versus ERF11_MA1001.2_JASPAR_rc (ERF11:MA1001.2:JASPAR_rc); m=100/237; ncol2=12; w=-2; offset=-2; strand=R; shift=7; score= 550; -------ddTGRCGGCGgm- ; cor=0.776; Ncor=0.597; logoDP=3.616; NsEucl=0.901; NSW=0.903; rcor=638; rNcor=360; rlogoDP=569; rNsEucl=568; rNSW=615; rank_mean=550.000; match_rank= a 0 0 0 0 0 0 0 356 414 120 96 894 12 2 19 31 10 198 377 0 c 0 0 0 0 0 0 0 160 136 134 40 22 1252 2 23 1218 8 203 455 0 g 0 0 0 0 0 0 0 391 407 28 1081 331 0 1269 1230 1 1243 728 136 0 t 0 0 0 0 0 0 0 373 323 998 63 33 16 7 8 30 19 151 312 0
ERF024PS_EEAD0159_EEADannot_rc_shift9 (ERF024PS:EEAD0159:EEADannot_rc)	0.758	0.556	1.964	0.913	0.917	725	517	747	333	457	555.800	; assembly_17 versus ERF024PS_EEAD0159_EEADannot_rc (ERF024PS:EEAD0159:EEADannot_rc); m=101/237; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 555.8; ---------mrryGkCGGCR ; cor=0.758; Ncor=0.556; logoDP=1.964; NsEucl=0.913; NSW=0.917; rcor=725; rNcor=517; rlogoDP=747; rNsEucl=333; rNSW=457; rank_mean=555.800; match_rank= a 0 0 0 0 0 0 0 0 0 25 31 33 4 0 24 3 0 7 10 26 c 0 0 0 0 0 0 0 0 0 35 8 10 60 0 0 97 0 0 68 3 g 0 0 0 0 0 0 0 0 0 23 53 41 0 100 44 0 100 93 3 68 t 0 0 0 0 0 0 0 0 0 17 8 16 36 0 32 0 0 0 19 3
ERF008_MA0979.1_JASPAR_rc_shift12 (ERF008:MA0979.1:JASPAR_rc)	0.789	0.574	2.466	0.899	0.918	559	448	720	622	444	558.600	; assembly_17 versus ERF008_MA0979.1_JASPAR_rc (ERF008:MA0979.1:JASPAR_rc); m=102/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 558.6; ------------sGkCGGyG ; cor=0.789; Ncor=0.574; logoDP=2.466; NsEucl=0.899; NSW=0.918; rcor=559; rNcor=448; rlogoDP=720; rNsEucl=622; rNSW=444; rank_mean=558.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 154 34 101 26 8 26 17 41 c 0 0 0 0 0 0 0 0 0 0 0 0 329 68 56 865 19 58 634 24 g 0 0 0 0 0 0 0 0 0 0 0 0 417 828 524 44 934 889 15 787 t 0 0 0 0 0 0 0 0 0 0 0 0 100 70 320 66 39 27 335 148
LBD18.DAP_M0470_AthalianaCistrome_rc_shift2 (LBD18.DAP:M0470:AthalianaCistrome_rc)	0.788	0.456	0.336	0.924	0.936	563	866	982	174	219	560.800	; assembly_17 versus LBD18.DAP_M0470_AthalianaCistrome_rc (LBD18.DAP:M0470:AthalianaCistrome_rc); m=103/237; ncol2=19; w=-7; offset=-7; strand=R; shift=2; score= 560.8; --sCgGAAAwtccGsmgrar ; cor=0.788; Ncor=0.456; logoDP=0.336; NsEucl=0.924; NSW=0.936; rcor=563; rNcor=866; rlogoDP=982; rNsEucl=174; rNSW=219; rank_mean=560.800; match_rank= a 0 0 24 29 69 41 414 416 471 386 102 138 93 0 10 256 148 160 246 236 c 0 0 352 571 47 65 6 2 7 49 131 297 365 1 170 232 16 87 130 60 g 0 0 204 0 407 409 117 127 76 11 74 103 38 580 403 41 346 248 79 171 t 0 0 20 0 77 85 63 55 46 154 293 62 104 19 17 71 90 105 145 133
ERF105_MA1000.2_JASPAR_shift8 (ERF105:MA1000.2:JASPAR)	0.753	0.552	5.545	0.902	0.895	756	527	285	548	693	561.800	; assembly_17 versus ERF105_MA1000.2_JASPAR (ERF105:MA1000.2:JASPAR); m=104/237; ncol2=15; w=-1; offset=-1; strand=D; shift=8; score= 561.8; --------ghrryGGCGGCG ; cor=0.753; Ncor=0.552; logoDP=5.545; NsEucl=0.902; NSW=0.895; rcor=756; rNcor=527; rlogoDP=285; rNsEucl=548; rNSW=693; rank_mean=561.800; match_rank= a 0 0 0 0 0 0 0 0 144 149 168 189 50 0 21 1 0 0 21 1 c 0 0 0 0 0 0 0 0 57 181 44 37 307 0 0 569 0 1 544 0 g 0 0 0 0 0 0 0 0 278 36 257 312 0 586 565 0 586 585 0 523 t 0 0 0 0 0 0 0 0 107 220 117 48 229 0 0 16 0 0 21 62
ERF115_MA2013.1_JASPAR_rc_shift8 (ERF115:MA2013.1:JASPAR_rc)	0.795	0.583	0.679	0.909	0.908	524	416	907	417	550	562.800	; assembly_17 versus ERF115_MA2013.1_JASPAR_rc (ERF115:MA2013.1:JASPAR_rc); m=105/237; ncol2=15; w=-1; offset=-1; strand=R; shift=8; score= 562.8; --------gykGCGGCGGCG ; cor=0.795; Ncor=0.583; logoDP=0.679; NsEucl=0.909; NSW=0.908; rcor=524; rNcor=416; rlogoDP=907; rNsEucl=417; rNSW=550; rank_mean=562.800; match_rank= a 0 0 0 0 0 0 0 0 221 166 97 121 18 12 24 10 10 18 126 32 c 0 0 0 0 0 0 0 0 92 375 42 55 840 0 12 880 6 35 715 15 g 0 0 0 0 0 0 0 0 418 71 286 698 3 880 865 1 866 839 8 815 t 0 0 0 0 0 0 0 0 174 293 480 31 44 13 4 14 23 13 56 43
ERF5_MA1225.1_JASPAR_rc_shift9 (ERF5:MA1225.1:JASPAR_rc)	0.777	0.570	1.666	0.909	0.908	633	464	772	411	546	565.200	; assembly_17 versus ERF5_MA1225.1_JASPAR_rc (ERF5:MA1225.1:JASPAR_rc); m=106/237; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 565.2; ---------yGGCGGCGGcG ; cor=0.777; Ncor=0.570; logoDP=1.666; NsEucl=0.909; NSW=0.908; rcor=633; rNcor=464; rlogoDP=772; rNsEucl=411; rNSW=546; rank_mean=565.200; match_rank= a 0 0 0 0 0 0 0 0 0 106 72 142 42 0 19 9 0 16 129 23 c 0 0 0 0 0 0 0 0 0 219 29 17 465 0 20 503 0 32 370 5 g 0 0 0 0 0 0 0 0 0 17 424 418 0 576 537 0 564 529 0 494 t 0 0 0 0 0 0 0 0 0 238 55 3 73 4 4 68 16 3 81 58
ERF095_MA1264.2_JASPAR_shift8 (ERF095:MA1264.2:JASPAR)	0.740	0.627	5.047	0.900	0.889	812	260	381	607	770	566.000	; assembly_17 versus ERF095_MA1264.2_JASPAR (ERF095:MA1264.2:JASPAR); m=107/237; ncol2=13; w=-1; offset=-1; strand=D; shift=8; score= 566; --------ryGGCGGCGGmG ; cor=0.740; Ncor=0.627; logoDP=5.047; NsEucl=0.900; NSW=0.889; rcor=812; rNcor=260; rlogoDP=381; rNsEucl=607; rNSW=770; rank_mean=566.000; match_rank= a 0 0 0 0 0 0 0 0 189 78 4 55 3 0 0 13 5 76 191 90 c 0 0 0 0 0 0 0 0 45 335 0 2 570 0 4 525 6 85 231 25 g 0 0 0 0 0 0 0 0 327 2 587 534 0 591 587 0 503 423 43 402 t 0 0 0 0 0 0 0 0 30 176 0 0 18 0 0 53 77 7 126 74
At3g14180.DAP_M0777_AthalianaCistrome_rc_shift7 (At3g14180.DAP:M0777:AthalianaCistrome_rc)	0.811	0.561	2.265	0.899	0.909	452	502	732	610	537	566.600	; assembly_17 versus At3g14180.DAP_M0777_AthalianaCistrome_rc (At3g14180.DAP:M0777:AthalianaCistrome_rc); m=108/237; ncol2=11; w=-2; offset=-2; strand=R; shift=7; score= 566.6; -------wTyTCCGGyGA-- ; cor=0.811; Ncor=0.561; logoDP=2.265; NsEucl=0.899; NSW=0.909; rcor=452; rNcor=502; rlogoDP=732; rNsEucl=610; rNSW=537; rank_mean=566.600; match_rank= a 0 0 0 0 0 0 0 168 101 15 25 0 0 0 30 0 62 451 0 0 c 0 0 0 0 0 0 0 37 47 273 8 598 598 0 1 404 23 34 0 0 g 0 0 0 0 0 0 0 90 32 6 32 0 0 598 556 0 490 80 0 0 t 0 0 0 0 0 0 0 303 418 304 533 0 0 0 11 194 23 33 0 0
WIN1_MA1804.2_JASPAR_rc_shift14 (WIN1:MA1804.2:JASPAR_rc)	0.843	0.460	0.283	0.903	0.944	289	855	1013	527	160	568.800	; assembly_17 versus WIN1_MA1804.2_JASPAR_rc (WIN1:MA1804.2:JASPAR_rc); m=109/237; ncol2=6; w=0; offset=5; strand=R; shift=14; score= 568.8; --------------gCGGyG ; cor=0.843; Ncor=0.460; logoDP=0.283; NsEucl=0.903; NSW=0.944; rcor=289; rNcor=855; rlogoDP=1013; rNsEucl=527; rNSW=160; rank_mean=568.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 78 77 43 17 1 10 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 79 712 1 187 615 133 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 679 9 956 795 1 720 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 164 202 1 1 384 137
WIN1_MA1804.1_JASPAR_rc_shift8 (WIN1:MA1804.1:JASPAR_rc)	0.768	0.576	1.869	0.904	0.917	680	440	759	512	453	568.800	; assembly_17 versus WIN1_MA1804.1_JASPAR_rc (WIN1:MA1804.1:JASPAR_rc); m=110/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 568.8; --------aykgCGGyGs-- ; cor=0.768; Ncor=0.576; logoDP=1.869; NsEucl=0.904; NSW=0.917; rcor=680; rNcor=440; rlogoDP=759; rNsEucl=512; rNSW=453; rank_mean=568.800; match_rank= a 0 0 0 0 0 0 0 0 406 158 145 78 77 43 17 0.58 9.58 94 0 0 c 0 0 0 0 0 0 0 0 172 426 155 79 712 0.69 187 615 133 267 0 0 g 0 0 0 0 0 0 0 0 239 163 352 679 9.19 956 795 0.68 720 390 0 0 t 0 0 0 0 0 0 0 0 184.07 253 348.47 164 202 1.12 1.03 384 137 249 0 0
LEP_MA1246.1_JASPAR_rc_shift1 (LEP:MA1246.1:JASPAR_rc)	0.822	0.431	0.545	0.918	0.927	384	953	936	247	329	569.800	; assembly_17 versus LEP_MA1246.1_JASPAR_rc (LEP:MA1246.1:JASPAR_rc); m=111/237; ncol2=21; w=-8; offset=-8; strand=R; shift=1; score= 569.8; -ggcggydgygrCGGCGGmG ; cor=0.822; Ncor=0.431; logoDP=0.545; NsEucl=0.918; NSW=0.927; rcor=384; rNcor=953; rlogoDP=936; rNsEucl=247; rNSW=329; rank_mean=569.800; match_rank= a 0 100 111 116 80 121 122 127 95 111 90 157 7 1 10 8 0 36 172 32 c 0 44 51 222 48 56 187 41 44 146 22 20 460 0 0 456 0 52 226 9 g 0 278 240 80 254 252 56 189 232 27 303 301 0 489 480 0 488 398 23 413 t 0 68 88 72 108 61 125 133 119 206 75 12 23 0 0 26 2 4 69 36
WIN1_M0006_1.02_CISBP_rc_shift8 (WIN1:M0006_1.02:CISBP_rc)	0.767	0.575	1.904	0.904	0.917	685	442	757	516	455	571.000	; assembly_17 versus WIN1_M0006_1.02_CISBP_rc (WIN1:M0006_1.02:CISBP_rc); m=112/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 571; --------aykGCGGyGb-- ; cor=0.767; Ncor=0.575; logoDP=1.904; NsEucl=0.904; NSW=0.917; rcor=685; rNcor=442; rlogoDP=757; rNsEucl=516; rNSW=455; rank_mean=571.000; match_rank= a 0 0 0 0 0 0 0 0 41 16 14 8 8 4 1 1 1 9 0 0 c 0 0 0 0 0 0 0 0 17 43 16 8 71 0 19 61 13 27 0 0 g 0 0 0 0 0 0 0 0 24 16 35 68 1 96 80 0 72 39 0 0 t 0 0 0 0 0 0 0 0 18 25 35 16 20 0 0 38 14 25 0 0
ERF13_MA1004.1_JASPAR_rc_shift12 (ERF13:MA1004.1:JASPAR_rc)	0.793	0.577	3.637	0.892	0.906	539	436	566	745	571	571.400	; assembly_17 versus ERF13_MA1004.1_JASPAR_rc (ERF13:MA1004.1:JASPAR_rc); m=113/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 571.4; ------------yGgCGGCs ; cor=0.793; Ncor=0.577; logoDP=3.637; NsEucl=0.892; NSW=0.906; rcor=539; rNcor=436; rlogoDP=566; rNsEucl=745; rNSW=571; rank_mean=571.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 154 0 113 0 0 0 0 22 c 0 0 0 0 0 0 0 0 0 0 0 0 282 0 145 983 16 32 951 283 g 0 0 0 0 0 0 0 0 0 0 0 0 103 999 645 16 983 951 49 478 t 0 0 0 0 0 0 0 0 0 0 0 0 461 0 97 0 0 16 0 217
ERF115_MA2013.2_JASPAR_rc_shift10 (ERF115:MA2013.2:JASPAR_rc)	0.794	0.662	0.679	0.900	0.900	534	169	908	599	653	572.600	; assembly_17 versus ERF115_MA2013.2_JASPAR_rc (ERF115:MA2013.2:JASPAR_rc); m=114/237; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 572.6; ----------kGCGGCGGCG ; cor=0.794; Ncor=0.662; logoDP=0.679; NsEucl=0.900; NSW=0.900; rcor=534; rNcor=169; rlogoDP=908; rNsEucl=599; rNSW=653; rank_mean=572.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 97 121 18 12 24 10 10 18 126 32 c 0 0 0 0 0 0 0 0 0 0 42 55 840 0 12 880 6 35 715 15 g 0 0 0 0 0 0 0 0 0 0 286 698 3 880 865 1 866 839 8 815 t 0 0 0 0 0 0 0 0 0 0 480 31 44 13 4 14 23 13 56 43
AT5G23930_UN0357.1_JASPAR_rc_shift11 (AT5G23930:UN0357.1:JASPAR_rc)	0.789	0.592	4.236	0.892	0.894	560	381	482	750	702	575.000	; assembly_17 versus AT5G23930_UN0357.1_JASPAR_rc (AT5G23930:UN0357.1:JASPAR_rc); m=115/237; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 575; -----------ryGGCGGCk ; cor=0.789; Ncor=0.592; logoDP=4.236; NsEucl=0.892; NSW=0.894; rcor=560; rNcor=381; rlogoDP=482; rNsEucl=750; rNSW=702; rank_mean=575.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 598 296 0 0 0 0 0 0 125 c 0 0 0 0 0 0 0 0 0 0 0 249 1135 0 0 2074 0 0 2074 91 g 0 0 0 0 0 0 0 0 0 0 0 1036 43 2074 2074 0 2074 2074 0 1323 t 0 0 0 0 0 0 0 0 0 0 0 191 600 0 0 0 0 0 0 535
ATERF13_M0020_1.02_CISBP_rc_shift12 (ATERF13:M0020_1.02:CISBP_rc)	0.791	0.575	3.598	0.891	0.906	544	443	571	755	582	579.000	; assembly_17 versus ATERF13_M0020_1.02_CISBP_rc (ATERF13:M0020_1.02:CISBP_rc); m=116/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 579; ------------yGgCGGCs ; cor=0.791; Ncor=0.575; logoDP=3.598; NsEucl=0.891; NSW=0.906; rcor=544; rNcor=443; rlogoDP=571; rNsEucl=755; rNSW=582; rank_mean=579.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 15 0 11 0 0 0 0 2 c 0 0 0 0 0 0 0 0 0 0 0 0 28 0 15 98 2 3 95 28 g 0 0 0 0 0 0 0 0 0 0 0 0 10 100 64 2 98 95 5 48 t 0 0 0 0 0 0 0 0 0 0 0 0 47 0 10 0 0 2 0 22
ERF7.DAP_M0018_AthalianaCistrome_rc_shift9 (ERF7.DAP:M0018:AthalianaCistrome_rc)	0.812	0.425	0.307	0.921	0.931	439	978	998	216	279	582.000	; assembly_17 versus ERF7.DAP_M0018_AthalianaCistrome_rc (ERF7.DAP:M0018:AthalianaCistrome_rc); m=117/237; ncol2=21; w=0; offset=0; strand=R; shift=9; score= 582; ---------tgrCGGCGGmG ; cor=0.812; Ncor=0.425; logoDP=0.307; NsEucl=0.921; NSW=0.931; rcor=439; rNcor=978; rlogoDP=998; rNsEucl=216; rNSW=279; rank_mean=582.000; match_rank= a 0 0 0 0 0 0 0 0 0 120 75 252 18 0 13 29 18 49 218 75 c 0 0 0 0 0 0 0 0 0 133 35 10 520 0 0 494 0 40 230 20 g 0 0 0 0 0 0 0 0 0 24 394 327 0 593 574 0 525 467 20 411 t 0 0 0 0 0 0 0 0 0 316 89 4 55 0 6 70 50 37 125 87
ERF115.DAP_M0081_AthalianaCistrome_rc_shift3 (ERF115.DAP:M0081:AthalianaCistrome_rc)	0.824	0.436	0.925	0.909	0.926	374	938	870	407	346	587.000	; assembly_17 versus ERF115.DAP_M0081_AthalianaCistrome_rc (ERF115.DAP:M0081:AthalianaCistrome_rc); m=118/237; ncol2=15; w=-6; offset=-6; strand=R; shift=3; score= 587; ---cGGcgrygRCGGCGG-- ; cor=0.824; Ncor=0.436; logoDP=0.925; NsEucl=0.909; NSW=0.926; rcor=374; rNcor=938; rlogoDP=870; rNsEucl=407; rNSW=346; rank_mean=587.000; match_rank= a 0 0 0 75 73 106 132 96 187 97 57 160 17 0 10 37 15 55 0 0 c 0 0 0 360 33 14 345 20 15 244 5 8 532 0 25 497 8 67 0 0 g 0 0 0 37 436 449 10 368 350 7 406 426 0 585 556 0 527 461 0 0 t 0 0 0 127 57 30 112 115 47 251 131 5 50 14 8 65 49 16 0 0
ATERF15_M0017_1.02_CISBP_rc_shift9 (ATERF15:M0017_1.02:CISBP_rc)	0.777	0.565	2.563	0.896	0.914	631	479	711	665	484	594.000	; assembly_17 versus ATERF15_M0017_1.02_CISBP_rc (ATERF15:M0017_1.02:CISBP_rc); m=119/237; ncol2=8; w=0; offset=0; strand=R; shift=9; score= 594; ---------gGCCGsCg--- ; cor=0.777; Ncor=0.565; logoDP=2.563; NsEucl=0.896; NSW=0.914; rcor=631; rNcor=479; rlogoDP=711; rNsEucl=665; rNSW=484; rank_mean=594.000; match_rank= a 0 0 0 0 0 0 0 0 0 14 3 3 5 3 3 3 17 0 0 0 c 0 0 0 0 0 0 0 0 0 17 3 71 84 5 34 89 13 0 0 0 g 0 0 0 0 0 0 0 0 0 59 91 23 3 89 61 5 50 0 0 0 t 0 0 0 0 0 0 0 0 0 10 3 3 8 3 2 3 20 0 0 0
RAP2-12_MA1256.2_JASPAR_shift7 (RAP2-12:MA1256.2:JASPAR)	0.781	0.541	5.386	0.891	0.892	610	567	313	763	726	595.800	; assembly_17 versus RAP2-12_MA1256.2_JASPAR (RAP2-12:MA1256.2:JASPAR); m=120/237; ncol2=11; w=-2; offset=-2; strand=D; shift=7; score= 595.8; -------rryGGCGGCGg-- ; cor=0.781; Ncor=0.541; logoDP=5.386; NsEucl=0.891; NSW=0.892; rcor=610; rNcor=567; rlogoDP=313; rNsEucl=763; rNSW=726; rank_mean=595.800; match_rank= a 0 0 0 0 0 0 0 266 274 68 10 52 0 0 0 7 9 66 0 0 c 0 0 0 0 0 0 0 14 15 207 6 0 596 0 0 575 6 101 0 0 g 0 0 0 0 0 0 0 170 184 4 494 542 0 596 596 0 517 402 0 0 t 0 0 0 0 0 0 0 147 124 318 87 3 1 1 1 15 65 28 0 0
ERF104.ampDAP_M0130_AthalianaCistrome_shift6 (ERF104.ampDAP:M0130:AthalianaCistrome)	0.745	0.547	5.357	0.900	0.891	794	547	319	589	747	599.200	; assembly_17 versus ERF104.ampDAP_M0130_AthalianaCistrome (ERF104.ampDAP:M0130:AthalianaCistrome); m=121/237; ncol2=15; w=-3; offset=-3; strand=D; shift=6; score= 599.2; ------ygryGGCGGCGgmg ; cor=0.745; Ncor=0.547; logoDP=5.357; NsEucl=0.900; NSW=0.891; rcor=794; rNcor=547; rlogoDP=319; rNsEucl=589; rNSW=747; rank_mean=599.200; match_rank= a 0 0 0 0 0 0 58 66 75 29 2 30 0 0 0 1 0 39 91 41 c 0 0 0 0 0 0 94 25 24 134 0 1 282 0 0 278 11 50 115 19 g 0 0 0 0 0 0 27 137 168 1 281 252 0 283 283 0 234 182 23 172 t 0 0 0 0 0 0 104 55 16 119 0 0 1 0 0 4 38 12 54 51
ERF13.ampDAP_M0032_AthalianaCistrome_shift9 (ERF13.ampDAP:M0032:AthalianaCistrome)	0.734	0.539	5.105	0.903	0.897	858	575	363	531	676	600.600	; assembly_17 versus ERF13.ampDAP_M0032_AthalianaCistrome (ERF13.ampDAP:M0032:AthalianaCistrome); m=122/237; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 600.6; ---------hwryGGCGGCk ; cor=0.734; Ncor=0.539; logoDP=5.105; NsEucl=0.903; NSW=0.897; rcor=858; rNcor=575; rlogoDP=363; rNsEucl=531; rNSW=676; rank_mean=600.600; match_rank= a 0 0 0 0 0 0 0 0 0 181 242 303 100 3 51 1 0 2 0 5 c 0 0 0 0 0 0 0 0 0 169 54 49 201 0 0 577 0 0 577 31 g 0 0 0 0 0 0 0 0 0 61 133 156 6 575 484 0 573 576 0 307 t 0 0 0 0 0 0 0 0 0 167 149 70 271 0 43 0 5 0 1 235
ATERF-4_M0022_1.02_CISBP_rc_shift10 (ATERF-4:M0022_1.02:CISBP_rc)	0.807	0.587	0.524	0.895	0.912	468	403	941	690	505	601.400	; assembly_17 versus ATERF-4_M0022_1.02_CISBP_rc (ATERF-4:M0022_1.02:CISBP_rc); m=123/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 601.4; ----------GgCGGCGg-- ; cor=0.807; Ncor=0.587; logoDP=0.524; NsEucl=0.895; NSW=0.912; rcor=468; rNcor=403; rlogoDP=941; rNsEucl=690; rNSW=505; rank_mean=601.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 4 15 0 0 1 1 9 9 0 0 c 0 0 0 0 0 0 0 0 0 0 4 13 99 1 8 95 12 22 0 0 g 0 0 0 0 0 0 0 0 0 0 80 66 0 98 90 2 73 52 0 0 t 0 0 0 0 0 0 0 0 0 0 12 6 1 1 1 2 6 17 0 0
EREB29_B73_1_m1_EEAD0343_EEADannot_rc_shift9 (EREB29_B73_1_m1:EEAD0343:EEADannot_rc)	0.723	0.723	4.335	0.895	0.878	924	67	468	695	854	601.600	; assembly_17 versus EREB29_B73_1_m1_EEAD0343_EEADannot_rc (EREB29_B73_1_m1:EEAD0343:EEADannot_rc); m=124/237; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 601.6; ---------cGrCGGCGGCG ; cor=0.723; Ncor=0.723; logoDP=4.335; NsEucl=0.895; NSW=0.878; rcor=924; rNcor=67; rlogoDP=468; rNsEucl=695; rNSW=854; rank_mean=601.600; match_rank= a 0 0 0 0 0 0 0 0 0 8 4 27 4 2 13 0 1 14 4 7 c 0 0 0 0 0 0 0 0 0 64 6 3 85 0 0 94 0 3 82 0 g 0 0 0 0 0 0 0 0 0 13 87 66 1 98 83 0 99 82 6 93 t 0 0 0 0 0 0 0 0 0 15 3 4 10 0 4 6 0 1 8 0
RAP212_MA1256.1_JASPAR_shift0 (RAP212:MA1256.1:JASPAR)	0.775	0.406	5.389	0.908	0.906	647	1059	310	432	570	603.600	; assembly_17 versus RAP212_MA1256.1_JASPAR (RAP212:MA1256.1:JASPAR); m=125/237; ncol2=21; w=-9; offset=-9; strand=D; shift=0; score= 603.6; cgghgrwrryGGCGGCGgmg ; cor=0.775; Ncor=0.406; logoDP=5.389; NsEucl=0.908; NSW=0.906; rcor=647; rNcor=1059; rlogoDP=310; rNsEucl=432; rNSW=570; rank_mean=603.600; match_rank= a 127 133 140 159 133 191 244 266 274 68 10 52 0 0 0 7 9 66 228 98 c 224 64 86 192 83 72 131 14 15 207 6 0 596 0 0 575 6 101 188 42 g 119 286 276 90 250 250 52 170 184 4 494 542 0 596 596 0 517 402 49 350 t 127 114 95 156 131 84 170 147 124 318 87 3 1 1 1 15 65 28 132 107
ERF4_MA0992.1_JASPAR_rc_shift10 (ERF4:MA0992.1:JASPAR_rc)	0.806	0.586	0.528	0.895	0.911	472	405	939	698	507	604.200	; assembly_17 versus ERF4_MA0992.1_JASPAR_rc (ERF4:MA0992.1:JASPAR_rc); m=126/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 604.2; ----------GgCGGCGg-- ; cor=0.806; Ncor=0.586; logoDP=0.528; NsEucl=0.895; NSW=0.911; rcor=472; rNcor=405; rlogoDP=939; rNsEucl=698; rNSW=507; rank_mean=604.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 39 150 0 0 6 6 94 90 0 0 c 0 0 0 0 0 0 0 0 0 0 39 131 988 12 83 952 115 225 0 0 g 0 0 0 0 0 0 0 0 0 0 800 662 6 976 899 18 726 517 0 0 t 0 0 0 0 0 0 0 0 0 0 123 56 6 12 12 24 65 169 0 0
0100010458_M0076_1.02_CISBP_rc_shift12 (0100010458:M0076_1.02:CISBP_rc)	0.786	0.572	4.096	0.887	0.897	575	456	504	820	677	606.400	; assembly_17 versus 0100010458_M0076_1.02_CISBP_rc (0100010458:M0076_1.02:CISBP_rc); m=127/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 606.4; ------------yGGCGGCg ; cor=0.786; Ncor=0.572; logoDP=4.096; NsEucl=0.887; NSW=0.897; rcor=575; rNcor=456; rlogoDP=504; rNsEucl=820; rNSW=677; rank_mean=606.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 7 0 6 0 0 0 0 8 c 0 0 0 0 0 0 0 0 0 0 0 0 32 0 21 100 2 8 100 14 g 0 0 0 0 0 0 0 0 0 0 0 0 3 100 71 0 98 92 0 60 t 0 0 0 0 0 0 0 0 0 0 0 0 58 0 2 0 0 0 0 18
EREB2_B73_1_m1_EEAD0345_EEADannot_rc_shift9 (EREB2_B73_1_m1:EEAD0345:EEADannot_rc)	0.717	0.717	4.413	0.895	0.879	963	76	461	686	846	606.400	; assembly_17 versus EREB2_B73_1_m1_EEAD0345_EEADannot_rc (EREB2_B73_1_m1:EEAD0345:EEADannot_rc); m=128/237; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 606.4; ---------cGRCGGCGGCG ; cor=0.717; Ncor=0.717; logoDP=4.413; NsEucl=0.895; NSW=0.879; rcor=963; rNcor=76; rlogoDP=461; rNsEucl=686; rNSW=846; rank_mean=606.400; match_rank= a 0 0 0 0 0 0 0 0 0 6 7 26 6 0 12 0 0 12 6 7 c 0 0 0 0 0 0 0 0 0 65 4 0 83 0 3 96 0 4 80 2 g 0 0 0 0 0 0 0 0 0 12 87 70 1 100 77 0 100 78 6 88 t 0 0 0 0 0 0 0 0 0 17 2 4 10 0 8 4 0 6 8 3
ERF10.ampDAP_M0091_AthalianaCistrome_shift0 (ERF10.ampDAP:M0091:AthalianaCistrome)	0.771	0.424	6.003	0.904	0.899	661	983	229	505	657	607.000	; assembly_17 versus ERF10.ampDAP_M0091_AthalianaCistrome (ERF10.ampDAP:M0091:AthalianaCistrome); m=129/237; ncol2=20; w=-9; offset=-9; strand=D; shift=0; score= 607; cgrhrrwwrtGGCGGCGghk ; cor=0.771; Ncor=0.424; logoDP=6.003; NsEucl=0.904; NSW=0.899; rcor=661; rNcor=983; rlogoDP=229; rNsEucl=505; rNSW=657; rank_mean=607.000; match_rank= a 135 126 149 148 153 194 212 247 254 58 2 42 0 0 0 1 1 39 219 141 c 181 107 93 174 73 80 105 31 37 132 0 0 565 0 0 564 0 138 162 26 g 123 203 214 96 224 202 58 123 183 4 507 513 0 565 565 0 549 362 35 247 t 126 129 109 147 115 89 190 164 91 371 56 10 0 0 0 0 15 26 149 151
LOB_MA2022.1_JASPAR_rc_shift4 (LOB:MA2022.1:JASPAR_rc)	0.790	0.511	0.664	0.910	0.911	549	674	910	389	515	607.400	; assembly_17 versus LOB_MA2022.1_JASPAR_rc (LOB:MA2022.1:JASPAR_rc); m=130/237; ncol2=17; w=-5; offset=-5; strand=R; shift=4; score= 607.4; ----ggcrgckGCGGCGGCG ; cor=0.790; Ncor=0.511; logoDP=0.664; NsEucl=0.910; NSW=0.911; rcor=549; rNcor=674; rlogoDP=910; rNsEucl=389; rNSW=515; rank_mean=607.400; match_rank= a 0 0 0 0 167 140 178 261 113 101 103 50 24 27 16 23 24 18 133 86 c 0 0 0 0 87 96 373 56 71 532 44 38 733 8 7 729 4 10 552 24 g 0 0 0 0 382 463 74 331 538 33 398 693 1 721 768 4 739 760 18 569 t 0 0 0 0 159 96 170 147 73 129 250 14 37 39 4 39 28 7 92 116
ERF73.ampDAP_M0138_AthalianaCistrome_shift8 (ERF73.ampDAP:M0138:AthalianaCistrome)	0.781	0.409	5.947	0.905	0.900	612	1043	237	500	648	608.000	; assembly_17 versus ERF73.ampDAP_M0138_AthalianaCistrome (ERF73.ampDAP:M0138:AthalianaCistrome); m=131/237; ncol2=21; w=-1; offset=-1; strand=D; shift=8; score= 608; --------ryGGCGGCGGmG ; cor=0.781; Ncor=0.409; logoDP=5.947; NsEucl=0.905; NSW=0.900; rcor=612; rNcor=1043; rlogoDP=237; rNsEucl=500; rNSW=648; rank_mean=608.000; match_rank= a 0 0 0 0 0 0 0 0 73 14 7 14 2 1 0 0 0 9 63 22 c 0 0 0 0 0 0 0 0 6 62 2 1 174 0 0 175 2 21 66 4 g 0 0 0 0 0 0 0 0 73 9 147 161 0 175 175 0 168 143 4 129 t 0 0 0 0 0 0 0 0 24 91 20 0 0 0 1 1 6 3 43 21
ERF9.ampDAP_M0096_AthalianaCistrome_rc_shift5 (ERF9.ampDAP:M0096:AthalianaCistrome_rc)	0.778	0.504	2.776	0.907	0.905	623	703	684	444	587	608.200	; assembly_17 versus ERF9.ampDAP_M0096_AthalianaCistrome_rc (ERF9.ampDAP:M0096:AthalianaCistrome_rc); m=132/237; ncol2=17; w=-4; offset=-4; strand=R; shift=5; score= 608.2; -----rwwatGGCGGCGgmg ; cor=0.778; Ncor=0.504; logoDP=2.776; NsEucl=0.907; NSW=0.905; rcor=623; rNcor=703; rlogoDP=684; rNsEucl=444; rNSW=587; rank_mean=608.200; match_rank= a 0 0 0 0 0 212 256 274 304 85 7 140 0 0 0 0 0 27 214 126 c 0 0 0 0 0 74 92 23 20 107 0 0 572 0 0 571 4 141 184 32 g 0 0 0 0 0 203 70 86 112 1 523 420 0 572 572 0 537 375 57 316 t 0 0 0 0 0 83 154 189 136 379 42 12 0 0 0 1 31 29 117 98
LFY_MA0590.1_JASPAR_shift5 (LFY:MA0590.1:JASPAR)	0.762	0.441	4.294	0.909	0.909	711	926	471	404	530	608.400	; assembly_17 versus LFY_MA0590.1_JASPAR (LFY:MA0590.1:JASPAR); m=133/237; ncol2=19; w=-4; offset=-4; strand=D; shift=5; score= 608.4; -----yATkrACCGsCGGTy ; cor=0.762; Ncor=0.441; logoDP=4.294; NsEucl=0.909; NSW=0.909; rcor=711; rNcor=926; rlogoDP=471; rNsEucl=404; rNSW=530; rank_mean=608.400; match_rank= a 0 0 0 0 0 32 266 56 20 126 228 10 0 94 35 10 19 8 50 4 c 0 0 0 0 0 104 13 75 7 0 43 364 358 2 174 273 0 0 2 246 g 0 0 0 0 0 49 17 12 178 246 2 0 0 273 174 2 358 364 43 0 t 0 0 0 0 0 199 80 325 360 4 50 8 19 10 35 94 0 10 228 126
EREB29_Mo17_1_EEAD0344_EEADannot_shift9 (EREB29_Mo17_1:EEAD0344:EEADannot)	0.719	0.719	5.208	0.892	0.871	951	70	345	751	930	609.400	; assembly_17 versus EREB29_Mo17_1_EEAD0344_EEADannot (EREB29_Mo17_1:EEAD0344:EEADannot); m=134/237; ncol2=11; w=0; offset=0; strand=D; shift=9; score= 609.4; ---------cGGCGGCGGCG ; cor=0.719; Ncor=0.719; logoDP=5.208; NsEucl=0.892; NSW=0.871; rcor=951; rNcor=70; rlogoDP=345; rNsEucl=751; rNSW=930; rank_mean=609.400; match_rank= a 0 0 0 0 0 0 0 0 0 10 4 19 4 0 11 2 0 3 9 7 c 0 0 0 0 0 0 0 0 0 65 1 0 85 0 0 96 0 8 80 2 g 0 0 0 0 0 0 0 0 0 7 94 78 0 99 87 0 99 86 5 88 t 0 0 0 0 0 0 0 0 0 18 1 3 11 1 2 2 1 3 6 3
ERF4_MA0992.3_JASPAR_rc_shift9 (ERF4:MA0992.3:JASPAR_rc)	0.781	0.639	2.280	0.890	0.892	609	218	731	767	737	612.400	; assembly_17 versus ERF4_MA0992.3_JASPAR_rc (ERF4:MA0992.3:JASPAR_rc); m=135/237; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 612.4; ---------TGrCGGCGg-- ; cor=0.781; Ncor=0.639; logoDP=2.280; NsEucl=0.890; NSW=0.892; rcor=609; rNcor=218; rlogoDP=731; rNsEucl=767; rNSW=737; rank_mean=612.400; match_rank= a 0 0 0 0 0 0 0 0 0 86 56 627 8 1 17 19 5 126 0 0 c 0 0 0 0 0 0 0 0 0 91 25 13 1006 2 9 979 2 165 0 0 g 0 0 0 0 0 0 0 0 0 19 900 349 0 1015 992 1 1005 644 0 0 t 0 0 0 0 0 0 0 0 0 827 42 34 9 5 5 24 11 88 0 0
ERF1B_MA0567.1_JASPAR_rc_shift12 (ERF1B:MA0567.1:JASPAR_rc)	0.790	0.574	3.654	0.885	0.894	553	445	564	835	701	619.600	; assembly_17 versus ERF1B_MA0567.1_JASPAR_rc (ERF1B:MA0567.1:JASPAR_rc); m=136/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 619.6; ------------tGGCGGCk ; cor=0.790; Ncor=0.574; logoDP=3.654; NsEucl=0.885; NSW=0.894; rcor=553; rNcor=445; rlogoDP=564; rNsEucl=835; rNSW=701; rank_mean=619.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 12 1 4 1 0 1 1 1 c 0 0 0 0 0 0 0 0 0 0 0 0 24 1 2 97 0 1 98 3 g 0 0 0 0 0 0 0 0 0 0 0 0 5 98 92 0 96 98 1 54 t 0 0 0 0 0 0 0 0 0 0 0 0 58 1 2 2 4 0 1 42
RAP2-10_MA0980.1_JASPAR_rc_shift13 (RAP2-10:MA0980.1:JASPAR_rc)	0.848	0.495	0.671	0.891	0.918	268	733	909	754	446	622.000	; assembly_17 versus RAP2-10_MA0980.1_JASPAR_rc (RAP2-10:MA0980.1:JASPAR_rc); m=137/237; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 622; -------------GGCGGCG ; cor=0.848; Ncor=0.495; logoDP=0.671; NsEucl=0.891; NSW=0.918; rcor=268; rNcor=733; rlogoDP=909; rNsEucl=754; rNSW=446; rank_mean=622.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 92 69 32 6 4 7 22 c 0 0 0 0 0 0 0 0 0 0 0 0 0 16 85 952 9 78 872 14 g 0 0 0 0 0 0 0 0 0 0 0 0 0 859 838 7 981 912 5 942 t 0 0 0 0 0 0 0 0 0 0 0 0 0 33 8 9 4 6 117 22
JUB1_MA2017.1_JASPAR_shift8 (JUB1:MA2017.1:JASPAR)	0.714	0.561	4.687	0.903	0.897	987	503	429	525	674	623.600	; assembly_17 versus JUB1_MA2017.1_JASPAR (JUB1:MA2017.1:JASPAR); m=138/237; ncol2=14; w=-1; offset=-1; strand=D; shift=8; score= 623.6; --------dycACGGCGagt ; cor=0.714; Ncor=0.561; logoDP=4.687; NsEucl=0.903; NSW=0.897; rcor=987; rNcor=503; rlogoDP=429; rNsEucl=525; rNSW=674; rank_mean=623.600; match_rank= a 0 0 0 0 0 0 0 0 151 113 96 458 9 9 3 12 33 288 68 67 c 0 0 0 0 0 0 0 0 79 153 236 30 492 8 12 476 10 36 122 47 g 0 0 0 0 0 0 0 0 132 65 115 10 0 489 492 0 457 82 196 121 t 0 0 0 0 0 0 0 0 147 178 62 11 8 3 2 21 9 103 123 274
ABR1.ampDAP_M0034_AthalianaCistrome_rc_shift2 (ABR1.ampDAP:M0034:AthalianaCistrome_rc)	0.797	0.417	0.850	0.915	0.920	514	1011	886	296	419	625.200	; assembly_17 versus ABR1.ampDAP_M0034_AthalianaCistrome_rc (ABR1.ampDAP:M0034:AthalianaCistrome_rc); m=139/237; ncol2=21; w=-7; offset=-7; strand=R; shift=2; score= 625.2; --rygrawaTkGCGGCGgmg ; cor=0.797; Ncor=0.417; logoDP=0.850; NsEucl=0.915; NSW=0.920; rcor=514; rNcor=1011; rlogoDP=886; rNsEucl=296; rNSW=419; rank_mean=625.200; match_rank= a 0 0 154 129 133 200 262 284 378 70 27 103 0 0 0 0 0 57 198 116 c 0 0 98 185 99 85 115 30 3 78 0 5 582 0 0 583 5 126 205 47 g 0 0 207 123 224 224 82 120 82 0 319 449 0 583 583 0 468 374 69 302 t 0 0 124 146 127 74 124 149 120 435 237 26 1 0 0 0 110 26 111 118
Zm00001d020267_MA1817.1_JASPAR_rc_shift8 (Zm00001d020267:MA1817.1:JASPAR_rc)	0.730	0.618	4.057	0.897	0.882	877	279	509	662	828	631.000	; assembly_17 versus Zm00001d020267_MA1817.1_JASPAR_rc (Zm00001d020267:MA1817.1:JASPAR_rc); m=140/237; ncol2=13; w=-1; offset=-1; strand=R; shift=8; score= 631; --------gcGGCGGCGGCg ; cor=0.730; Ncor=0.618; logoDP=4.057; NsEucl=0.897; NSW=0.882; rcor=877; rNcor=279; rlogoDP=509; rNsEucl=662; rNSW=828; rank_mean=631.000; match_rank= a 0 0 0 0 0 0 0 0 2485 1892 420 508 471 329 399 331 351 403 488 1929 c 0 0 0 0 0 0 0 0 3317 7641 760 657 13639 446 632 13656 555 683 13149 2985 g 0 0 0 0 0 0 0 0 6993 3064 13267 13257 233 13749 13462 247 13624 13416 711 8346 t 0 0 0 0 0 0 0 0 2006 2204 354 379 458 277 308 567 271 299 453 1541
ERF7.ampDAP_M0063_AthalianaCistrome_shift8 (ERF7.ampDAP:M0063:AthalianaCistrome)	0.765	0.401	5.442	0.906	0.903	697	1083	304	467	613	632.800	; assembly_17 versus ERF7.ampDAP_M0063_AthalianaCistrome (ERF7.ampDAP:M0063:AthalianaCistrome); m=141/237; ncol2=21; w=-1; offset=-1; strand=D; shift=8; score= 632.8; --------ayGGCGGCGgmr ; cor=0.765; Ncor=0.401; logoDP=5.442; NsEucl=0.906; NSW=0.903; rcor=697; rNcor=1083; rlogoDP=304; rNsEucl=467; rNSW=613; rank_mean=632.800; match_rank= a 0 0 0 0 0 0 0 0 315 59 2 103 0 0 0 1 0 65 219 151 c 0 0 0 0 0 0 0 0 23 164 0 1 579 0 2 577 7 119 172 33 g 0 0 0 0 0 0 0 0 120 7 537 469 0 579 576 0 481 365 69 301 t 0 0 0 0 0 0 0 0 121 349 40 6 0 0 1 1 91 30 119 94
ERF077_MA1240.2_JASPAR_rc_shift11 (ERF077:MA1240.2:JASPAR_rc)	0.768	0.576	3.879	0.889	0.890	679	438	532	782	758	637.800	; assembly_17 versus ERF077_MA1240.2_JASPAR_rc (ERF077:MA1240.2:JASPAR_rc); m=142/237; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 637.8; -----------ryGGCGGCG ; cor=0.768; Ncor=0.576; logoDP=3.879; NsEucl=0.889; NSW=0.890; rcor=679; rNcor=438; rlogoDP=532; rNsEucl=782; rNSW=758; rank_mean=637.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 175 53 9 55 0 0 0 85 4 c 0 0 0 0 0 0 0 0 0 0 0 42 323 0 0 544 0 0 448 6 g 0 0 0 0 0 0 0 0 0 0 0 310 0 528 511 0 571 571 0 538 t 0 0 0 0 0 0 0 0 0 0 0 44 195 34 5 27 0 0 38 23
ERF118_MA1671.2_JASPAR_rc_shift10 (ERF118:MA1671.2:JASPAR_rc)	0.809	0.588	0.838	0.888	0.900	462	393	887	805	652	639.800	; assembly_17 versus ERF118_MA1671.2_JASPAR_rc (ERF118:MA1671.2:JASPAR_rc); m=143/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 639.8; ----------gGCGGCGg-- ; cor=0.809; Ncor=0.588; logoDP=0.838; NsEucl=0.888; NSW=0.900; rcor=462; rNcor=393; rlogoDP=887; rNsEucl=805; rNSW=652; rank_mean=639.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 617 48 30 7 1 10 26 482 0 0 c 0 0 0 0 0 0 0 0 0 0 286 11 3190 3 2 3186 0 354 0 0 g 0 0 0 0 0 0 0 0 0 0 1903 3338 9 3370 3396 8 3343 2309 0 0 t 0 0 0 0 0 0 0 0 0 0 593 2 170 19 0 195 30 254 0 0
ERF057_MA1753.1_JASPAR_rc_shift9 (ERF057:MA1753.1:JASPAR_rc)	0.753	0.552	1.212	0.906	0.902	758	528	818	475	622	640.200	; assembly_17 versus ERF057_MA1753.1_JASPAR_rc (ERF057:MA1753.1:JASPAR_rc); m=144/237; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 640.2; ---------tGGCGGyGGhG ; cor=0.753; Ncor=0.552; logoDP=1.212; NsEucl=0.906; NSW=0.902; rcor=758; rNcor=528; rlogoDP=818; rNsEucl=475; rNSW=622; rank_mean=640.200; match_rank= a 0 0 0 0 0 0 0 0 0 199 91.696 171.28 32.872 0 0 10.381 3.46 58.824 337.37 93.426 c 0 0 0 0 0 0 0 0 0 189 0 12.111 874 0 0 578 12.111 44.983 389 31.142 g 0 0 0 0 0 0 0 0 0 130 856 694 3.46 1000 994.81 1.73 983 862 3.46 803 t 0 0 0 0 0 0 0 0 0 483 51.903 123 89.965 0 5.19 410 1.73 34.602 270 72.664
At5g65130.DAP_M0090_AthalianaCistrome_rc_shift9 (At5g65130.DAP:M0090:AthalianaCistrome_rc)	0.753	0.552	1.211	0.906	0.902	759	529	819	476	623	641.200	; assembly_17 versus At5g65130.DAP_M0090_AthalianaCistrome_rc (At5g65130.DAP:M0090:AthalianaCistrome_rc); m=145/237; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 641.2; ---------tGGCGGyGGhG ; cor=0.753; Ncor=0.552; logoDP=1.211; NsEucl=0.906; NSW=0.902; rcor=759; rNcor=529; rlogoDP=819; rNsEucl=476; rNSW=623; rank_mean=641.200; match_rank= a 0 0 0 0 0 0 0 0 0 115 53 99 19 0 0 6 2 34 195 54 c 0 0 0 0 0 0 0 0 0 109 0 7 505 0 0 334 7 26 225 18 g 0 0 0 0 0 0 0 0 0 75 495 401 2 578 575 1 568 498 2 464 t 0 0 0 0 0 0 0 0 0 279 30 71 52 0 3 237 1 20 156 42
ATERF-7_M0023_1.02_CISBP_rc_shift7 (ATERF-7:M0023_1.02:CISBP_rc)	0.795	0.489	0.192	0.904	0.926	529	758	1066	521	345	643.800	; assembly_17 versus ATERF-7_M0023_1.02_CISBP_rc (ATERF-7:M0023_1.02:CISBP_rc); m=146/237; ncol2=10; w=-2; offset=-2; strand=R; shift=7; score= 643.8; -------wwtgrCGGCk--- ; cor=0.795; Ncor=0.489; logoDP=0.192; NsEucl=0.904; NSW=0.926; rcor=529; rNcor=758; rlogoDP=1066; rNsEucl=521; rNSW=345; rank_mean=643.800; match_rank= a 0 0 0 0 0 0 0 31 32 20 13 27 1 6 0 4 16 0 0 0 c 0 0 0 0 0 0 0 20 20 21 7 13 88 4 8 87 14 0 0 0 g 0 0 0 0 0 0 0 21 20 17 59 45 2 77 87 1 44 0 0 0 t 0 0 0 0 0 0 0 28 28 42 21 15 9 13 5 8 26 0 0 0
LOC_Os08g36920_M0044_1.02_CISBP_rc_shift9 (LOC_Os08g36920:M0044_1.02:CISBP_rc)	0.713	0.648	0.298	0.905	0.909	991	196	1002	501	536	645.200	; assembly_17 versus LOC_Os08g36920_M0044_1.02_CISBP_rc (LOC_Os08g36920:M0044_1.02:CISBP_rc); m=147/237; ncol2=10; w=0; offset=0; strand=R; shift=9; score= 645.2; ---------tkrCGsCgsv- ; cor=0.713; Ncor=0.648; logoDP=0.298; NsEucl=0.905; NSW=0.909; rcor=991; rNcor=196; rlogoDP=1002; rNsEucl=501; rNSW=536; rank_mean=645.200; match_rank= a 0 0 0 0 0 0 0 0 0 23 22 30 0 0 3 4 19 24 27 0 c 0 0 0 0 0 0 0 0 0 23 16 0 100 0 31 79 24 25 25 0 g 0 0 0 0 0 0 0 0 0 19 32 49 0 100 64 0 34 32 25 0 t 0 0 0 0 0 0 0 0 0 35 30 21 0 0 2 17 23 19 23 0
ERF7_MA0993.1_JASPAR_rc_shift7 (ERF7:MA0993.1:JASPAR_rc)	0.794	0.489	0.194	0.904	0.926	531	762	1064	522	348	645.400	; assembly_17 versus ERF7_MA0993.1_JASPAR_rc (ERF7:MA0993.1:JASPAR_rc); m=148/237; ncol2=10; w=-2; offset=-2; strand=R; shift=7; score= 645.4; -------wwtgrCGGCk--- ; cor=0.794; Ncor=0.489; logoDP=0.194; NsEucl=0.904; NSW=0.926; rcor=531; rNcor=762; rlogoDP=1064; rNsEucl=522; rNSW=348; rank_mean=645.400; match_rank= a 0 0 0 0 0 0 0 312 317 198 128 266 10 65 0 35 156 0 0 0 c 0 0 0 0 0 0 0 201 198 210 66 132 875 36 84 874 140 0 0 0 g 0 0 0 0 0 0 0 209 208 174 593 456 25 770 868 14 442 0 0 0 t 0 0 0 0 0 0 0 279 276 419 212 146 90 129 48 77 263 0 0 0
ERF105_MA1000.3_JASPAR_shift11 (ERF105:MA1000.3:JASPAR)	0.755	0.566	5.541	0.882	0.876	741	475	286	864	884	650.000	; assembly_17 versus ERF105_MA1000.3_JASPAR (ERF105:MA1000.3:JASPAR); m=149/237; ncol2=10; w=0; offset=2; strand=D; shift=11; score= 650; -----------ryGGCGGCG ; cor=0.755; Ncor=0.566; logoDP=5.541; NsEucl=0.882; NSW=0.876; rcor=741; rNcor=475; rlogoDP=286; rNsEucl=864; rNSW=884; rank_mean=650.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 189 50 0 21 1 0 0 21 1 c 0 0 0 0 0 0 0 0 0 0 0 37 307 0 0 569 0 1 544 0 g 0 0 0 0 0 0 0 0 0 0 0 312 0 586 565 0 586 585 0 523 t 0 0 0 0 0 0 0 0 0 0 0 48 229 0 0 16 0 0 21 62
AT4G18450_MA1228.1_JASPAR_shift8 (AT4G18450:MA1228.1:JASPAR)	0.747	0.483	5.345	0.900	0.889	783	773	322	605	767	650.000	; assembly_17 versus AT4G18450_MA1228.1_JASPAR (AT4G18450:MA1228.1:JASPAR); m=150/237; ncol2=17; w=-1; offset=-1; strand=D; shift=8; score= 650; --------ryGGCGGCGGmg ; cor=0.747; Ncor=0.483; logoDP=5.345; NsEucl=0.900; NSW=0.889; rcor=783; rNcor=773; rlogoDP=322; rNsEucl=605; rNSW=767; rank_mean=650.000; match_rank= a 0 0 0 0 0 0 0 0 187 78 0 34 0 0 0 13 6 85 179 91 c 0 0 0 0 0 0 0 0 52 289 0 0 526 0 0 505 7 69 205 25 g 0 0 0 0 0 0 0 0 263 0 534 503 0 537 537 0 472 378 32 337 t 0 0 0 0 0 0 0 0 35 170 3 0 11 0 0 19 52 5 121 84
EREB87_Mo17_1_EEAD0358_EEADannot_rc_shift9 (EREB87_Mo17_1:EEAD0358:EEADannot_rc)	0.718	0.718	4.618	0.889	0.863	961	74	436	799	987	651.400	; assembly_17 versus EREB87_Mo17_1_EEAD0358_EEADannot_rc (EREB87_Mo17_1:EEAD0358:EEADannot_rc); m=151/237; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 651.4; ---------cGGCGGCGGCG ; cor=0.718; Ncor=0.718; logoDP=4.618; NsEucl=0.889; NSW=0.863; rcor=961; rNcor=74; rlogoDP=436; rNsEucl=799; rNSW=987; rank_mean=651.400; match_rank= a 0 0 0 0 0 0 0 0 0 9 2 13 3 1 5 1 0 1 4 4 c 0 0 0 0 0 0 0 0 0 65 4 4 82 0 2 97 0 6 91 2 g 0 0 0 0 0 0 0 0 0 12 90 78 2 99 92 0 99 93 0 93 t 0 0 0 0 0 0 0 0 0 14 4 5 13 0 1 2 1 0 5 1
RAP2.6_M0010_1.02_CISBP_rc_shift10 (RAP2.6:M0010_1.02:CISBP_rc)	0.787	0.572	0.213	0.895	0.912	569	453	1054	693	506	655.000	; assembly_17 versus RAP2.6_M0010_1.02_CISBP_rc (RAP2.6:M0010_1.02:CISBP_rc); m=152/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 655; ----------gmCgGCrs-- ; cor=0.787; Ncor=0.572; logoDP=0.213; NsEucl=0.895; NSW=0.912; rcor=569; rNcor=453; rlogoDP=1054; rNsEucl=693; rNSW=506; rank_mean=655.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 22 27 7 23 13 0 33 24 0 0 c 0 0 0 0 0 0 0 0 0 0 10 36 70 11 5 95 18 32 0 0 g 0 0 0 0 0 0 0 0 0 0 48 19 9 63 78 0 38 26 0 0 t 0 0 0 0 0 0 0 0 0 0 20 18 14 3 4 5 11 18 0 0
AT2G33710_MA1245.2_JASPAR_rc_shift8 (AT2G33710:MA1245.2:JASPAR_rc)	0.737	0.614	2.855	0.893	0.886	837	290	665	723	792	661.400	; assembly_17 versus AT2G33710_MA1245.2_JASPAR_rc (AT2G33710:MA1245.2:JASPAR_rc); m=153/237; ncol2=11; w=-1; offset=-1; strand=R; shift=8; score= 661.4; --------ryGGCGGCGgh- ; cor=0.737; Ncor=0.614; logoDP=2.855; NsEucl=0.893; NSW=0.886; rcor=837; rNcor=290; rlogoDP=665; rNsEucl=723; rNSW=792; rank_mean=661.400; match_rank= a 0 0 0 0 0 0 0 0 783 327 48 28 37 7 3 49 48 410 657 0 c 0 0 0 0 0 0 0 0 243 1264 3 14 2236 1 37 2173 33 361 895 0 g 0 0 0 0 0 0 0 0 1165 73 2406 2446 3 2449 2454 20 2246 1507 302 0 t 0 0 0 0 0 0 0 0 304 831 38 7 219 38 1 253 168 217 641 0
RAP211.ampDAP_M0019_AthalianaCistrome_rc_shift6 (RAP211.ampDAP:M0019:AthalianaCistrome_rc)	0.736	0.539	1.701	0.905	0.901	852	571	768	487	630	661.600	; assembly_17 versus RAP211.ampDAP_M0019_AthalianaCistrome_rc (RAP211.ampDAP:M0019:AthalianaCistrome_rc); m=154/237; ncol2=15; w=-3; offset=-3; strand=R; shift=6; score= 661.6; ------mwywGCCGGCsaar ; cor=0.736; Ncor=0.539; logoDP=1.701; NsEucl=0.905; NSW=0.901; rcor=852; rNcor=571; rlogoDP=768; rNsEucl=487; rNSW=630; rank_mean=661.600; match_rank= a 0 0 0 0 0 0 220 201 142 191 18 0 0 0 4 1 63 267 229 214 c 0 0 0 0 0 0 179 78 167 142 0 586 587 0 7 586 340 69 90 90 g 0 0 0 0 0 0 70 144 86 105 568 1 0 587 485 0 158 140 138 178 t 0 0 0 0 0 0 118 164 192 149 1 0 0 0 91 0 26 111 130 105
LBD18_MA1673.1_JASPAR_rc_shift6 (LBD18:MA1673.1:JASPAR_rc)	0.786	0.505	0.330	0.902	0.913	573	700	986	562	492	662.600	; assembly_17 versus LBD18_MA1673.1_JASPAR_rc (LBD18:MA1673.1:JASPAR_rc); m=155/237; ncol2=12; w=-3; offset=-3; strand=R; shift=6; score= 662.6; ------wwTTTCCGGCga-- ; cor=0.786; Ncor=0.505; logoDP=0.330; NsEucl=0.902; NSW=0.913; rcor=573; rNcor=700; rlogoDP=986; rNsEucl=562; rNSW=492; rank_mean=662.600; match_rank= a 0 0 0 0 0 0 1910 1735 679 668 240 251 166 153 130 286 1449 2177 0 0 c 0 0 0 0 0 0 1247 671 384 1009 159 5338 5531 316 290 4833 833 922 0 0 g 0 0 0 0 0 0 1189 1201 472 191 93 171 40 5168 5323 245 2201 1402 0 0 t 0 0 0 0 0 0 1519 2258 4330 3997 5373 105 128 228 122 501 1382 1364 0 0
Os05g0497200_MA1034.1_JASPAR_rc_shift12 (Os05g0497200:MA1034.1:JASPAR_rc)	0.776	0.564	4.983	0.876	0.877	641	485	391	934	874	665.000	; assembly_17 versus Os05g0497200_MA1034.1_JASPAR_rc (Os05g0497200:MA1034.1:JASPAR_rc); m=156/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 665; ------------yGGCGsCG ; cor=0.776; Ncor=0.564; logoDP=4.983; NsEucl=0.876; NSW=0.877; rcor=641; rNcor=485; rlogoDP=391; rNsEucl=934; rNSW=874; rank_mean=665.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 5 3 3 3 3 3 3 3 c 0 0 0 0 0 0 0 0 0 0 0 0 495 3 3 990 3 332 990 3 g 0 0 0 0 0 0 0 0 0 0 0 0 5 990 990 3 990 661 3 990 t 0 0 0 0 0 0 0 0 0 0 0 0 495 3 3 3 3 3 3 3
LOC_Os05g41760_M0043_1.02_CISBP_rc_shift12 (LOC_Os05g41760:M0043_1.02:CISBP_rc)	0.775	0.564	5.118	0.875	0.875	643	488	360	945	894	666.000	; assembly_17 versus LOC_Os05g41760_M0043_1.02_CISBP_rc (LOC_Os05g41760:M0043_1.02:CISBP_rc); m=157/237; ncol2=8; w=0; offset=3; strand=R; shift=12; score= 666; ------------yGGCGsCG ; cor=0.775; Ncor=0.564; logoDP=5.118; NsEucl=0.875; NSW=0.875; rcor=643; rNcor=488; rlogoDP=360; rNsEucl=945; rNSW=894; rank_mean=666.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 50 0 0 99 0 34 99 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 100 99 0 100 66 0 100 t 0 0 0 0 0 0 0 0 0 0 0 0 50 0 0 1 0 0 1 0
ERF3_MA1005.2_JASPAR_rc_shift8 (ERF3:MA1005.2:JASPAR_rc)	0.736	0.614	2.953	0.892	0.884	843	292	647	739	810	666.200	; assembly_17 versus ERF3_MA1005.2_JASPAR_rc (ERF3:MA1005.2:JASPAR_rc); m=158/237; ncol2=11; w=-1; offset=-1; strand=R; shift=8; score= 666.2; --------ryGGCGGCGgh- ; cor=0.736; Ncor=0.614; logoDP=2.953; NsEucl=0.892; NSW=0.884; rcor=843; rNcor=292; rlogoDP=647; rNsEucl=739; rNSW=810; rank_mean=666.200; match_rank= a 0 0 0 0 0 0 0 0 563 252 18 22 35 8 2 31 41 319 491 0 c 0 0 0 0 0 0 0 0 194 925 1 7 1697 1 3 1658 16 257 644 0 g 0 0 0 0 0 0 0 0 887 48 1852 1852 2 1844 1878 8 1713 1145 229 0 t 0 0 0 0 0 0 0 0 239 658 12 2 149 30 0 186 113 162 519 0
ERF2_MA1262.2_JASPAR_rc_shift8 (ERF2:MA1262.2:JASPAR_rc)	0.714	0.604	3.440	0.898	0.885	989	329	587	639	801	669.000	; assembly_17 versus ERF2_MA1262.2_JASPAR_rc (ERF2:MA1262.2:JASPAR_rc); m=159/237; ncol2=13; w=-1; offset=-1; strand=R; shift=8; score= 669; --------ryGGCGGCGghg ; cor=0.714; Ncor=0.604; logoDP=3.440; NsEucl=0.898; NSW=0.885; rcor=989; rNcor=329; rlogoDP=587; rNsEucl=639; rNSW=801; rank_mean=669.000; match_rank= a 0 0 0 0 0 0 0 0 212 65 0 30 2 0 2 44 17 109 197 118 c 0 0 0 0 0 0 0 0 52 353 0 0 550 0 0 509 9 85 190 27 g 0 0 0 0 0 0 0 0 305 0 595 565 0 588 590 0 451 367 46 348 t 0 0 0 0 0 0 0 0 26 177 0 0 43 7 3 42 118 34 162 102
RAP2.6_RAP2.6_ArabidopsisPBM_rc_shift12 (RAP2.6:RAP2.6:ArabidopsisPBM_rc)	0.826	0.508	0.685	0.890	0.903	363	693	906	778	612	670.400	; assembly_17 versus RAP2.6_RAP2.6_ArabidopsisPBM_rc (RAP2.6:RAP2.6:ArabidopsisPBM_rc); m=160/237; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 670.4; ------------yGGCGGCG ; cor=0.826; Ncor=0.508; logoDP=0.685; NsEucl=0.890; NSW=0.903; rcor=363; rNcor=693; rlogoDP=906; rNsEucl=778; rNSW=612; rank_mean=670.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 6 1 2 0 0 0 0 1 c 0 0 0 0 0 0 0 0 0 0 0 0 61 0 1 100 0 10 99 1 g 0 0 0 0 0 0 0 0 0 0 0 0 3 92 95 0 98 90 0 95 t 0 0 0 0 0 0 0 0 0 0 0 0 30 7 2 0 2 0 1 3
ERF2_MA1262.1_JASPAR_rc_shift9 (ERF2:MA1262.1:JASPAR_rc)	0.791	0.414	0.280	0.913	0.917	547	1021	1017	324	454	672.600	; assembly_17 versus ERF2_MA1262.1_JASPAR_rc (ERF2:MA1262.1:JASPAR_rc); m=161/237; ncol2=21; w=0; offset=0; strand=R; shift=9; score= 672.6; ---------ygryGGCGGCG ; cor=0.791; Ncor=0.414; logoDP=0.280; NsEucl=0.913; NSW=0.917; rcor=547; rNcor=1021; rlogoDP=1017; rNsEucl=324; rNSW=454; rank_mean=672.600; match_rank= a 0 0 0 0 0 0 0 0 0 136 144 212 65 0 30 2 0 2 44 17 c 0 0 0 0 0 0 0 0 0 212 78 52 353 0 0 550 0 0 509 9 g 0 0 0 0 0 0 0 0 0 29 251 305 0 595 565 0 588 590 0 451 t 0 0 0 0 0 0 0 0 0 218 122 26 177 0 0 43 7 3 42 118
Zm00001d020267_MA1817.2_JASPAR_rc_shift10 (Zm00001d020267:MA1817.2:JASPAR_rc)	0.736	0.670	2.829	0.888	0.875	842	152	672	803	895	672.800	; assembly_17 versus Zm00001d020267_MA1817.2_JASPAR_rc (Zm00001d020267:MA1817.2:JASPAR_rc); m=162/237; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 672.8; ----------GGCGGCGGCg ; cor=0.736; Ncor=0.670; logoDP=2.829; NsEucl=0.888; NSW=0.875; rcor=842; rNcor=152; rlogoDP=672; rNsEucl=803; rNSW=895; rank_mean=672.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 420 508 471 329 399 331 351 403 488 1929 c 0 0 0 0 0 0 0 0 0 0 760 657 13639 446 632 13656 555 683 13149 2985 g 0 0 0 0 0 0 0 0 0 0 13267 13257 233 13749 13462 247 13624 13416 711 8346 t 0 0 0 0 0 0 0 0 0 0 354 379 458 277 308 567 271 299 453 1541
EREB46_ZmSHINE_Mo17_1_EEAD0350_EEADannot_rc_shift9 (EREB46_ZmSHINE_Mo17_1:EEAD0350:EEADannot_rc)	0.707	0.707	4.108	0.889	0.865	1044	99	503	785	966	679.400	; assembly_17 versus EREB46_ZmSHINE_Mo17_1_EEAD0350_EEADannot_rc (EREB46_ZmSHINE_Mo17_1:EEAD0350:EEADannot_rc); m=163/237; ncol2=11; w=0; offset=0; strand=R; shift=9; score= 679.4; ---------cGGCGGCGGCG ; cor=0.707; Ncor=0.707; logoDP=4.108; NsEucl=0.889; NSW=0.865; rcor=1044; rNcor=99; rlogoDP=503; rNsEucl=785; rNSW=966; rank_mean=679.400; match_rank= a 0 0 0 0 0 0 0 0 0 10 3 11 6 1 3 0 0 3 8 4 c 0 0 0 0 0 0 0 0 0 67 0 0 81 0 0 84 0 7 76 2 g 0 0 0 0 0 0 0 0 0 7 95 81 0 99 94 1 100 88 3 94 t 0 0 0 0 0 0 0 0 0 16 2 8 13 0 3 15 0 2 13 0
ERF5_M0039_1.02_CISBP_rc_shift9 (ERF5:M0039_1.02:CISBP_rc)	0.710	0.646	0.220	0.903	0.906	1021	205	1051	539	583	679.800	; assembly_17 versus ERF5_M0039_1.02_CISBP_rc (ERF5:M0039_1.02:CISBP_rc); m=164/237; ncol2=10; w=0; offset=0; strand=R; shift=9; score= 679.8; ---------kggcggCksd- ; cor=0.710; Ncor=0.646; logoDP=0.220; NsEucl=0.903; NSW=0.906; rcor=1021; rNcor=205; rlogoDP=1051; rNsEucl=539; rNSW=583; rank_mean=679.800; match_rank= a 0 0 0 0 0 0 0 0 0 21 12 24 8 7 9 5 17 23 25 0 c 0 0 0 0 0 0 0 0 0 17 11 21 59 7 18 75 18 27 20 0 g 0 0 0 0 0 0 0 0 0 30 60 35 12 67 61 6 37 27 28 0 t 0 0 0 0 0 0 0 0 0 32 17 20 21 19 12 14 28 23 27 0
ERF73.DAP_M0117_AthalianaCistrome_rc_shift3 (ERF73.DAP:M0117:AthalianaCistrome_rc)	0.778	0.408	3.076	0.905	0.901	625	1047	632	483	627	682.800	; assembly_17 versus ERF73.DAP_M0117_AthalianaCistrome_rc (ERF73.DAP:M0117:AthalianaCistrome_rc); m=165/237; ncol2=21; w=-6; offset=-6; strand=R; shift=3; score= 682.8; ---ygrhdryGGCGGCGGmg ; cor=0.778; Ncor=0.408; logoDP=3.076; NsEucl=0.905; NSW=0.901; rcor=625; rNcor=1047; rlogoDP=632; rNsEucl=483; rNSW=627; rank_mean=682.800; match_rank= a 0 0 0 134 131 181 213 208 232 64 31 29 7 0 4 0 0 39 206 80 c 0 0 0 182 65 61 149 35 47 214 8 0 549 0 0 545 0 87 212 16 g 0 0 0 100 231 236 43 165 216 0 471 534 0 563 559 0 549 418 50 365 t 0 0 0 147 136 85 158 155 68 285 53 0 7 0 0 18 14 19 95 102
ERF073_MA1754.1_JASPAR_rc_shift3 (ERF073:MA1754.1:JASPAR_rc)	0.778	0.408	3.075	0.905	0.901	627	1048	633	484	628	684.000	; assembly_17 versus ERF073_MA1754.1_JASPAR_rc (ERF073:MA1754.1:JASPAR_rc); m=166/237; ncol2=21; w=-6; offset=-6; strand=R; shift=3; score= 684; ---ygrhdryGGCGGCGGmg ; cor=0.778; Ncor=0.408; logoDP=3.075; NsEucl=0.905; NSW=0.901; rcor=627; rNcor=1048; rlogoDP=633; rNsEucl=484; rNSW=628; rank_mean=684.000; match_rank= a 0 0 0 238 233 321 378.33 369 412 114 55.062 51.51 12.433 0 7.105 0 0 69.272 366 142 c 0 0 0 323 115 108 265 62.167 83.481 380 14.21 0 975 0 0 968 0 155 377 28.419 g 0 0 0 177.62 410 419 76.377 293 384 0 836.59 948.49 0 1000 993 0 975 742 88.81 648 t 0 0 0 261 242 151 281 275 121 506 94.139 0 12.433 0 0 31.972 24.867 33.748 169 181
EREB201_ZmCRF3_Mo17_1_EEAD0340_EEADannot_shift8 (EREB201_ZmCRF3_Mo17_1:EEAD0340:EEADannot)	0.718	0.599	5.055	0.887	0.872	956	355	379	817	922	685.800	; assembly_17 versus EREB201_ZmCRF3_Mo17_1_EEAD0340_EEADannot (EREB201_ZmCRF3_Mo17_1:EEAD0340:EEADannot); m=167/237; ncol2=11; w=-1; offset=-1; strand=D; shift=8; score= 685.8; --------cGGCCGGCmGs- ; cor=0.718; Ncor=0.599; logoDP=5.055; NsEucl=0.887; NSW=0.872; rcor=956; rNcor=355; rlogoDP=379; rNsEucl=817; rNSW=922; rank_mean=685.800; match_rank= a 0 0 0 0 0 0 0 0 18 6 0 8 0 0 0 0 42 16 4 0 c 0 0 0 0 0 0 0 0 58 17 0 88 99 0 0 100 36 10 46 0 g 0 0 0 0 0 0 0 0 6 77 100 4 1 98 100 0 20 71 43 0 t 0 0 0 0 0 0 0 0 18 0 0 0 0 2 0 0 2 3 7 0
ATERF-1_M0028_1.02_CISBP_rc_shift9 (ATERF-1:M0028_1.02:CISBP_rc)	0.724	0.592	0.862	0.897	0.904	915	376	883	661	605	688.000	; assembly_17 versus ATERF-1_M0028_1.02_CISBP_rc (ATERF-1:M0028_1.02:CISBP_rc); m=168/237; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 688; ---------kGrcGGCks-- ; cor=0.724; Ncor=0.592; logoDP=0.862; NsEucl=0.897; NSW=0.904; rcor=915; rNcor=376; rlogoDP=883; rNsEucl=661; rNSW=605; rank_mean=688.000; match_rank= a 0 0 0 0 0 0 0 0 0 23 12 28 8 6 6 0 12 20 0 0 c 0 0 0 0 0 0 0 0 0 14 7 13 62 3 5 95 11 26 0 0 g 0 0 0 0 0 0 0 0 0 32 68 35 9 78 83 0 47 32 0 0 t 0 0 0 0 0 0 0 0 0 31 13 24 21 13 6 5 30 22 0 0
AT1G75490_MA1250.1_JASPAR_rc_shift9 (AT1G75490:MA1250.1:JASPAR_rc)	0.734	0.539	1.069	0.904	0.898	857	574	839	518	668	691.200	; assembly_17 versus AT1G75490_MA1250.1_JASPAR_rc (AT1G75490:MA1250.1:JASPAR_rc); m=169/237; ncol2=15; w=0; offset=0; strand=R; shift=9; score= 691.2; ---------wGgCGGYGGmg ; cor=0.734; Ncor=0.539; logoDP=1.069; NsEucl=0.904; NSW=0.898; rcor=857; rNcor=574; rlogoDP=839; rNsEucl=518; rNSW=668; rank_mean=691.200; match_rank= a 0 0 0 0 0 0 0 0 0 172 133 107 6 0 2 1 0 31 221 93 c 0 0 0 0 0 0 0 0 0 127 8 10 519 0 1 160 0 18 205 30 g 0 0 0 0 0 0 0 0 0 21 395 366 0 556 554 0 551 489 13 360 t 0 0 0 0 0 0 0 0 0 237 21 74 32 1 0 396 6 19 118 74
Solyc04g078640.3.1_AP2EREBP_1_AT1G46768_EEAD0649_EEADannot_shift13 (Solyc04g078640.3.1_AP2EREBP_1_AT1G46768:EEAD0649:EEADannot)	0.784	0.457	3.992	0.882	0.902	591	862	517	872	618	692.000	; assembly_17 versus Solyc04g078640.3.1_AP2EREBP_1_AT1G46768_EEAD0649_EEADannot (Solyc04g078640.3.1_AP2EREBP_1_AT1G46768:EEAD0649:EEADannot); m=170/237; ncol2=8; w=0; offset=4; strand=D; shift=13; score= 692; -------------GtCGGTG ; cor=0.784; Ncor=0.457; logoDP=3.992; NsEucl=0.882; NSW=0.902; rcor=591; rNcor=862; rlogoDP=517; rNsEucl=872; rNSW=618; rank_mean=692.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 2 23 0 0 0 5 7 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 93 0 0 18 6 g 0 0 0 0 0 0 0 0 0 0 0 0 0 91 18 0 100 100 0 70 t 0 0 0 0 0 0 0 0 0 0 0 0 0 7 51 7 0 0 77 17
Zm00001d024324_MA1820.1_JASPAR_rc_shift9 (Zm00001d024324:MA1820.1:JASPAR_rc)	0.735	0.622	0.766	0.898	0.885	855	272	895	640	805	693.400	; assembly_17 versus Zm00001d024324_MA1820.1_JASPAR_rc (Zm00001d024324:MA1820.1:JASPAR_rc); m=171/237; ncol2=13; w=0; offset=0; strand=R; shift=9; score= 693.4; ---------cgGCGGCGGCG ; cor=0.735; Ncor=0.622; logoDP=0.766; NsEucl=0.898; NSW=0.885; rcor=855; rNcor=272; rlogoDP=895; rNsEucl=640; rNSW=805; rank_mean=693.400; match_rank= a 0 0 0 0 0 0 0 0 0 3206 2945 949 761 623 792 609 593 627 714 676 c 0 0 0 0 0 0 0 0 0 11092 5360 1113 20848 864 1100 21141 695 934 20748 959 g 0 0 0 0 0 0 0 0 0 5407 11929 19965 425 20733 20319 350 20957 20683 627 20536 t 0 0 0 0 0 0 0 0 0 3014 2485 692 685 499 508 619 474 475 630 548
ABI4_ABI4_Athamap_rc_shift10 (ABI4:ABI4:Athamap_rc)	0.717	0.652	3.158	0.888	0.875	964	187	625	804	896	695.200	; assembly_17 versus ABI4_ABI4_Athamap_rc (ABI4:ABI4:Athamap_rc); m=172/237; ncol2=10; w=0; offset=1; strand=R; shift=10; score= 695.2; ----------sggGGCGGyG ; cor=0.717; Ncor=0.652; logoDP=3.158; NsEucl=0.888; NSW=0.875; rcor=964; rNcor=187; rlogoDP=625; rNsEucl=804; rNSW=896; rank_mean=695.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 4 2 1 0 0 0 0 0 0 1 c 0 0 0 0 0 0 0 0 0 0 6 4 5 0 0 20 0 0 9 0 g 0 0 0 0 0 0 0 0 0 0 7 13 14 20 21 0 21 21 0 20 t 0 0 0 0 0 0 0 0 0 0 4 2 1 1 0 1 0 0 12 0
AT5G07580_M0035_1.02_CISBP_shift12 (AT5G07580:M0035_1.02:CISBP)	0.764	0.509	1.065	0.893	0.909	702	685	840	721	539	697.400	; assembly_17 versus AT5G07580_M0035_1.02_CISBP (AT5G07580:M0035_1.02:CISBP); m=173/237; ncol2=9; w=0; offset=3; strand=D; shift=12; score= 697.4; ------------ygsYGgcy ; cor=0.764; Ncor=0.509; logoDP=1.065; NsEucl=0.893; NSW=0.909; rcor=702; rNcor=685; rlogoDP=840; rNsEucl=721; rNSW=539; rank_mean=697.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 13 9 11 1 13 12 16 17 c 0 0 0 0 0 0 0 0 0 0 0 0 27 10 35 68 6 19 48 32 g 0 0 0 0 0 0 0 0 0 0 0 0 20 67 36 0 70 48 13 21 t 0 0 0 0 0 0 0 0 0 0 0 0 40 14 18 31 11 21 23 30
ERF104_MA1239.2_JASPAR_rc_shift8 (ERF104:MA1239.2:JASPAR_rc)	0.743	0.511	1.846	0.902	0.895	802	679	760	554	697	698.400	; assembly_17 versus ERF104_MA1239.2_JASPAR_rc (ERF104:MA1239.2:JASPAR_rc); m=174/237; ncol2=16; w=-1; offset=-1; strand=R; shift=8; score= 698.4; --------ryGGCGGCGgmg ; cor=0.743; Ncor=0.511; logoDP=1.846; NsEucl=0.902; NSW=0.895; rcor=802; rNcor=679; rlogoDP=760; rNsEucl=554; rNSW=697; rank_mean=698.400; match_rank= a 0 0 0 0 0 0 0 0 192 62 0 89 3 0 0 25 5 90 169 75 c 0 0 0 0 0 0 0 0 51 281 0 0 527 0 2 496 6 76 213 33 g 0 0 0 0 0 0 0 0 274 0 553 466 0 557 555 0 464 369 50 363 t 0 0 0 0 0 0 0 0 40 214 4 2 27 0 0 36 82 22 125 86
RAP2-6_MA1052.1_JASPAR_rc_shift13 (RAP2-6:MA1052.1:JASPAR_rc)	0.840	0.490	0.649	0.880	0.900	303	753	911	890	651	701.600	; assembly_17 versus RAP2-6_MA1052.1_JASPAR_rc (RAP2-6:MA1052.1:JASPAR_rc); m=175/237; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 701.6; -------------GGCGGCG ; cor=0.840; Ncor=0.490; logoDP=0.649; NsEucl=0.880; NSW=0.900; rcor=303; rNcor=753; rlogoDP=911; rNsEucl=890; rNSW=651; rank_mean=701.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 10 20 3 1 1 2 8 c 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 990 2 104 989 7 g 0 0 0 0 0 0 0 0 0 0 0 0 0 921 947 3 985 894 2 958 t 0 0 0 0 0 0 0 0 0 0 0 0 0 66 20 4 12 2 7 27
ESE1.ampDAP_M0133_AthalianaCistrome_shift7 (ESE1.ampDAP:M0133:AthalianaCistrome)	0.747	0.411	5.366	0.899	0.889	790	1039	316	608	772	705.000	; assembly_17 versus ESE1.ampDAP_M0133_AthalianaCistrome (ESE1.ampDAP:M0133:AthalianaCistrome); m=176/237; ncol2=20; w=-2; offset=-2; strand=D; shift=7; score= 705; -------rryGGCGGCGGcg ; cor=0.747; Ncor=0.411; logoDP=5.366; NsEucl=0.899; NSW=0.889; rcor=790; rNcor=1039; rlogoDP=316; rNsEucl=608; rNSW=772; rank_mean=705.000; match_rank= a 0 0 0 0 0 0 0 68 96 48 0 21 0 0 0 7 4 27 61 40 c 0 0 0 0 0 0 0 28 15 122 0 0 254 0 0 246 2 50 123 11 g 0 0 0 0 0 0 0 111 131 4 260 239 0 255 260 0 239 182 20 167 t 0 0 0 0 0 0 0 53 18 86 0 0 6 5 0 7 15 1 56 42
RAP2.3_RAP2.3_ArabidopsisPBM_rc_shift9 (RAP2.3:RAP2.3:ArabidopsisPBM_rc)	0.711	0.646	0.618	0.896	0.893	1016	202	917	666	725	705.200	; assembly_17 versus RAP2.3_RAP2.3_ArabidopsisPBM_rc (RAP2.3:RAP2.3:ArabidopsisPBM_rc); m=177/237; ncol2=10; w=0; offset=0; strand=R; shift=9; score= 705.2; ---------wkGCGGCGcy- ; cor=0.711; Ncor=0.646; logoDP=0.618; NsEucl=0.896; NSW=0.893; rcor=1016; rNcor=202; rlogoDP=917; rNsEucl=666; rNSW=725; rank_mean=705.200; match_rank= a 0 0 0 0 0 0 0 0 0 25 7 8 1 0 0 0 6 11 15 0 c 0 0 0 0 0 0 0 0 0 17 1 3 98 0 24 98 3 54 47 0 g 0 0 0 0 0 0 0 0 0 9 66 78 0 98 75 1 76 23 13 0 t 0 0 0 0 0 0 0 0 0 49 26 11 1 2 1 1 15 12 25 0
AT3G11100_UN0353.2_JASPAR_shift11 (AT3G11100:UN0353.2:JASPAR)	0.782	0.498	4.840	0.871	0.883	601	721	416	971	820	705.800	; assembly_17 versus AT3G11100_UN0353.2_JASPAR (AT3G11100:UN0353.2:JASPAR); m=178/237; ncol2=7; w=0; offset=2; strand=D; shift=11; score= 705.8; -----------mCGGCGA-- ; cor=0.782; Ncor=0.498; logoDP=4.840; NsEucl=0.871; NSW=0.883; rcor=601; rNcor=721; rlogoDP=416; rNsEucl=971; rNSW=820; rank_mean=705.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 1432 16 24 57 102 73 2127 0 0 c 0 0 0 0 0 0 0 0 0 0 0 652 2413 13 26 2298 55 58 0 0 g 0 0 0 0 0 0 0 0 0 0 0 254 6 2445 2394 12 2311 198 0 0 t 0 0 0 0 0 0 0 0 0 0 0 158 61 14 19 84 57 113 0 0
ERF15_MA1231.2_JASPAR_rc_shift10 (ERF15:MA1231.2:JASPAR_rc)	0.771	0.514	0.171	0.902	0.904	662	667	1070	558	600	711.400	; assembly_17 versus ERF15_MA1231.2_JASPAR_rc (ERF15:MA1231.2:JASPAR_rc); m=179/237; ncol2=14; w=0; offset=1; strand=R; shift=10; score= 711.4; ----------rrhGGCGGCk ; cor=0.771; Ncor=0.514; logoDP=0.171; NsEucl=0.902; NSW=0.904; rcor=662; rNcor=667; rlogoDP=1070; rNsEucl=558; rNSW=600; rank_mean=711.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 581 754 581 8 39 12 9 5 18 87 c 0 0 0 0 0 0 0 0 0 0 348 236 911 8 14 2067 3 1 2078 94 g 0 0 0 0 0 0 0 0 0 0 695 929 62 2107 2066 3 2062 2124 7 942 t 0 0 0 0 0 0 0 0 0 0 509 214 579 10 14 51 59 3 30 1010
ERF096_MA0998.1_JASPAR_rc_shift11 (ERF096:MA0998.1:JASPAR_rc)	0.725	0.544	2.753	0.893	0.896	905	553	689	731	684	712.400	; assembly_17 versus ERF096_MA0998.1_JASPAR_rc (ERF096:MA0998.1:JASPAR_rc); m=180/237; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 712.4; -----------rtGgCGGCk ; cor=0.725; Ncor=0.544; logoDP=2.753; NsEucl=0.893; NSW=0.896; rcor=905; rNcor=553; rlogoDP=689; rNsEucl=731; rNSW=684; rank_mean=712.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 290 200 38 149 19 32 27 13 76 c 0 0 0 0 0 0 0 0 0 0 0 223 240 24 131 928 21 36 939 167 g 0 0 0 0 0 0 0 0 0 0 0 254 176 903 591 10 850 905 13 468 t 0 0 0 0 0 0 0 0 0 0 0 233 384 35 129 43 97 32 34 289
AT5G43410_M0037_1.02_CISBP_rc_shift11 (AT5G43410:M0037_1.02:CISBP_rc)	0.725	0.544	2.816	0.892	0.896	908	559	678	738	688	714.200	; assembly_17 versus AT5G43410_M0037_1.02_CISBP_rc (AT5G43410:M0037_1.02:CISBP_rc); m=181/237; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 714.2; -----------rtGgCGGCk ; cor=0.725; Ncor=0.544; logoDP=2.816; NsEucl=0.892; NSW=0.896; rcor=908; rNcor=559; rlogoDP=678; rNsEucl=738; rNSW=688; rank_mean=714.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 29 20 4 15 2 3 2 1 8 c 0 0 0 0 0 0 0 0 0 0 0 23 24 2 13 93 2 4 95 16 g 0 0 0 0 0 0 0 0 0 0 0 25 18 90 59 1 85 91 1 47 t 0 0 0 0 0 0 0 0 0 0 0 23 38 4 13 4 10 3 3 29
Zm00001d049364_MA1833.1_JASPAR_rc_shift7 (Zm00001d049364:MA1833.1:JASPAR_rc)	0.739	0.508	2.935	0.899	0.887	819	692	651	626	784	714.400	; assembly_17 versus Zm00001d049364_MA1833.1_JASPAR_rc (Zm00001d049364:MA1833.1:JASPAR_rc); m=182/237; ncol2=16; w=-2; offset=-2; strand=R; shift=7; score= 714.4; -------ggyGGCGGCGGCg ; cor=0.739; Ncor=0.508; logoDP=2.935; NsEucl=0.899; NSW=0.887; rcor=819; rNcor=692; rlogoDP=651; rNsEucl=626; rNSW=784; rank_mean=714.400; match_rank= a 0 0 0 0 0 0 0 2459 3070 2162 624 544 559 516 441 525 510 424 681 2187 c 0 0 0 0 0 0 0 4550 4110 8879 1008 777 17121 612 593 17063 607 601 16187 2975 g 0 0 0 0 0 0 0 9497 9179 2765 16513 16869 321 17013 17272 366 17025 17229 1027 9771 t 0 0 0 0 0 0 0 2100 2247 4800 461 416 605 465 300 652 464 352 711 3673
EREB201_ZmCRF3_B73_1_m1_EEAD0339_EEADannot_shift6 (EREB201_ZmCRF3_B73_1_m1:EEAD0339:EEADannot)	0.710	0.521	5.054	0.895	0.878	1023	636	380	696	856	718.200	; assembly_17 versus EREB201_ZmCRF3_B73_1_m1_EEAD0339_EEADannot (EREB201_ZmCRF3_B73_1_m1:EEAD0339:EEADannot); m=183/237; ncol2=15; w=-3; offset=-3; strand=D; shift=6; score= 718.2; ------ssCGGCCGGCmGss ; cor=0.710; Ncor=0.521; logoDP=5.054; NsEucl=0.895; NSW=0.878; rcor=1023; rNcor=636; rlogoDP=380; rNsEucl=696; rNSW=856; rank_mean=718.200; match_rank= a 0 0 0 0 0 0 6 10 14 9 0 7 0 1 0 0 28 19 7 12 c 0 0 0 0 0 0 28 53 72 7 0 89 100 0 0 100 48 9 37 39 g 0 0 0 0 0 0 61 29 3 83 100 4 0 96 100 0 23 71 43 35 t 0 0 0 0 0 0 5 8 11 1 0 0 0 3 0 0 1 1 13 14
ERF112_MA1245.3_JASPAR_rc_shift9 (ERF112:MA1245.3:JASPAR_rc)	0.738	0.604	2.854	0.882	0.874	830	330	666	873	900	719.800	; assembly_17 versus ERF112_MA1245.3_JASPAR_rc (ERF112:MA1245.3:JASPAR_rc); m=184/237; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 719.8; ---------yGGCGGCGg-- ; cor=0.738; Ncor=0.604; logoDP=2.854; NsEucl=0.882; NSW=0.874; rcor=830; rNcor=330; rlogoDP=666; rNsEucl=873; rNSW=900; rank_mean=719.800; match_rank= a 0 0 0 0 0 0 0 0 0 327 48 28 37 7 3 49 48 410 0 0 c 0 0 0 0 0 0 0 0 0 1264 3 14 2236 1 37 2173 33 361 0 0 g 0 0 0 0 0 0 0 0 0 73 2406 2446 3 2449 2454 20 2246 1507 0 0 t 0 0 0 0 0 0 0 0 0 831 38 7 219 38 1 253 168 217 0 0
LBD13_MA2021.2_JASPAR_rc_shift11 (LBD13:MA2021.2:JASPAR_rc)	0.764	0.555	2.528	0.881	0.887	705	520	715	884	782	721.200	; assembly_17 versus LBD13_MA2021.2_JASPAR_rc (LBD13:MA2021.2:JASPAR_rc); m=185/237; ncol2=8; w=0; offset=2; strand=R; shift=11; score= 721.2; -----------aCGGTGGa- ; cor=0.764; Ncor=0.555; logoDP=2.528; NsEucl=0.881; NSW=0.887; rcor=705; rNcor=520; rlogoDP=715; rNsEucl=884; rNSW=782; rank_mean=721.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 628 18 8 9 72 17 39 635 0 c 0 0 0 0 0 0 0 0 0 0 0 143 980 16 8 168 4 20 145 0 g 0 0 0 0 0 0 0 0 0 0 0 227 11 1021 1031 6 1018 979 44 0 t 0 0 0 0 0 0 0 0 0 0 0 57 46 10 7 809 16 17 231 0
ERF082_MA1005.3_JASPAR_rc_shift9 (ERF082:MA1005.3:JASPAR_rc)	0.737	0.603	2.952	0.881	0.872	834	334	648	888	920	724.800	; assembly_17 versus ERF082_MA1005.3_JASPAR_rc (ERF082:MA1005.3:JASPAR_rc); m=186/237; ncol2=9; w=0; offset=0; strand=R; shift=9; score= 724.8; ---------yGGCGGCGg-- ; cor=0.737; Ncor=0.603; logoDP=2.952; NsEucl=0.881; NSW=0.872; rcor=834; rNcor=334; rlogoDP=648; rNsEucl=888; rNSW=920; rank_mean=724.800; match_rank= a 0 0 0 0 0 0 0 0 0 252 18 22 35 8 2 31 41 319 0 0 c 0 0 0 0 0 0 0 0 0 925 1 7 1697 1 3 1658 16 257 0 0 g 0 0 0 0 0 0 0 0 0 48 1852 1852 2 1844 1878 8 1713 1145 0 0 t 0 0 0 0 0 0 0 0 0 658 12 2 149 30 0 186 113 162 0 0
ATERF1_ATERF1_2_ArabidopsisPBM_rc_shift8 (ATERF1:ATERF1_2:ArabidopsisPBM_rc)	0.725	0.544	3.916	0.886	0.883	906	554	523	827	823	726.600	; assembly_17 versus ATERF1_ATERF1_2_ArabidopsisPBM_rc (ATERF1:ATERF1_2:ArabidopsisPBM_rc); m=187/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 726.6; --------ytGCCGGCar-- ; cor=0.725; Ncor=0.544; logoDP=3.916; NsEucl=0.886; NSW=0.883; rcor=906; rNcor=554; rlogoDP=523; rNsEucl=827; rNSW=823; rank_mean=726.600; match_rank= a 0 0 0 0 0 0 0 0 16 14 4 3 1 4 1 1 59 29 0 0 c 0 0 0 0 0 0 0 0 29 15 0 90 95 0 6 94 12 24 0 0 g 0 0 0 0 0 0 0 0 20 12 94 6 1 95 90 1 15 33 0 0 t 0 0 0 0 0 0 0 0 35 59 2 1 3 1 3 4 14 14 0 0
DEAR3_DEAR3_ArabidopsisPBM_rc_shift11 (DEAR3:DEAR3:ArabidopsisPBM_rc)	0.720	0.540	2.465	0.893	0.896	945	569	721	736	687	731.600	; assembly_17 versus DEAR3_DEAR3_ArabidopsisPBM_rc (DEAR3:DEAR3:ArabidopsisPBM_rc); m=188/237; ncol2=10; w=0; offset=2; strand=R; shift=11; score= 731.6; -----------wsGkCGGyG ; cor=0.720; Ncor=0.540; logoDP=2.465; NsEucl=0.893; NSW=0.896; rcor=945; rNcor=569; rlogoDP=721; rNsEucl=736; rNSW=687; rank_mean=731.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 30 15 3 10 3 1 2 2 4 c 0 0 0 0 0 0 0 0 0 0 0 15 33 7 6 86 2 6 64 2 g 0 0 0 0 0 0 0 0 0 0 0 23 42 83 52 4 93 89 1 79 t 0 0 0 0 0 0 0 0 0 0 0 32 10 7 32 7 4 3 33 15
LBD19_IG1_AS2_Mo17_1_EEAD0422_EEADannot_rc_shift4 (LBD19_IG1_AS2_Mo17_1:EEAD0422:EEADannot_rc)	0.737	0.461	3.663	0.896	0.891	832	852	562	680	745	734.200	; assembly_17 versus LBD19_IG1_AS2_Mo17_1_EEAD0422_EEADannot_rc (LBD19_IG1_AS2_Mo17_1:EEAD0422:EEADannot_rc); m=189/237; ncol2=15; w=-5; offset=-5; strand=R; shift=4; score= 734.2; ----GGCGGCGGCGGCGGc- ; cor=0.737; Ncor=0.461; logoDP=3.663; NsEucl=0.896; NSW=0.891; rcor=832; rNcor=852; rlogoDP=562; rNsEucl=680; rNSW=745; rank_mean=734.200; match_rank= a 0 0 0 0 4 3 6 0 7 15 6 7 17 3 11 12 1 4 17 0 c 0 0 0 0 10 10 94 0 7 72 4 4 74 1 6 80 0 6 63 0 g 0 0 0 0 79 87 0 100 82 5 86 86 4 93 80 2 99 88 15 0 t 0 0 0 0 7 0 0 0 4 8 4 3 5 3 3 6 0 2 5 0
Zm00001d024324_MA1820.2_JASPAR_rc_shift11 (Zm00001d024324:MA1820.2:JASPAR_rc)	0.756	0.619	0.763	0.882	0.874	736	277	896	878	904	738.200	; assembly_17 versus Zm00001d024324_MA1820.2_JASPAR_rc (Zm00001d024324:MA1820.2:JASPAR_rc); m=190/237; ncol2=9; w=0; offset=2; strand=R; shift=11; score= 738.2; -----------GCGGCGGCG ; cor=0.756; Ncor=0.619; logoDP=0.763; NsEucl=0.882; NSW=0.874; rcor=736; rNcor=277; rlogoDP=896; rNsEucl=878; rNSW=904; rank_mean=738.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 949 761 623 792 609 593 627 714 676 c 0 0 0 0 0 0 0 0 0 0 0 1113 20848 864 1100 21141 695 934 20748 959 g 0 0 0 0 0 0 0 0 0 0 0 19965 425 20733 20319 350 20957 20683 627 20536 t 0 0 0 0 0 0 0 0 0 0 0 692 685 499 508 619 474 475 630 548
RRTF1_RRTF1_2_ArabidopsisPBM_rc_shift8 (RRTF1:RRTF1_2:ArabidopsisPBM_rc)	0.743	0.557	3.360	0.882	0.874	804	512	597	876	903	738.400	; assembly_17 versus RRTF1_RRTF1_2_ArabidopsisPBM_rc (RRTF1:RRTF1_2:ArabidopsisPBM_rc); m=191/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 738.4; --------wTkGCGGCGs-- ; cor=0.743; Ncor=0.557; logoDP=3.360; NsEucl=0.882; NSW=0.874; rcor=804; rNcor=512; rlogoDP=597; rNsEucl=876; rNSW=903; rank_mean=738.400; match_rank= a 0 0 0 0 0 0 0 0 48 5 1 5 1 0 0 0 1 4 0 0 c 0 0 0 0 0 0 0 0 8 3 1 2 98 1 3 99 2 43 0 0 g 0 0 0 0 0 0 0 0 17 2 54 91 1 98 97 1 87 46 0 0 t 0 0 0 0 0 0 0 0 27 90 44 2 0 1 0 0 10 7 0 0
Zm00001d049364_MA1833.2_JASPAR_rc_shift10 (Zm00001d049364:MA1833.2:JASPAR_rc)	0.741	0.618	0.377	0.890	0.878	808	282	967	779	858	738.800	; assembly_17 versus Zm00001d049364_MA1833.2_JASPAR_rc (Zm00001d049364:MA1833.2:JASPAR_rc); m=192/237; ncol2=11; w=0; offset=1; strand=R; shift=10; score= 738.8; ----------GGCGGCGGCg ; cor=0.741; Ncor=0.618; logoDP=0.377; NsEucl=0.890; NSW=0.878; rcor=808; rNcor=282; rlogoDP=967; rNsEucl=779; rNSW=858; rank_mean=738.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 624 544 559 516 441 525 510 424 681 2187 c 0 0 0 0 0 0 0 0 0 0 1008 777 17121 612 593 17063 607 601 16187 2975 g 0 0 0 0 0 0 0 0 0 0 16513 16869 321 17013 17272 366 17025 17229 1027 9771 t 0 0 0 0 0 0 0 0 0 0 461 416 605 465 300 652 464 352 711 3673
CRF4.DAP_M0131_AthalianaCistrome_rc_shift0 (CRF4.DAP:M0131:AthalianaCistrome_rc)	0.767	0.402	0.620	0.907	0.905	687	1078	916	455	596	746.400	; assembly_17 versus CRF4.DAP_M0131_AthalianaCistrome_rc (CRF4.DAP:M0131:AthalianaCistrome_rc); m=193/237; ncol2=21; w=-9; offset=-9; strand=R; shift=0; score= 746.4; cgGmgghgGyGGCGGCGGmg ; cor=0.767; Ncor=0.402; logoDP=0.620; NsEucl=0.907; NSW=0.905; rcor=687; rNcor=1078; rlogoDP=916; rNsEucl=455; rNSW=596; rank_mean=746.400; match_rank= a 51 46 26 65 39 47 62 44 45 24 3 36 6 0 0 24 7 8 92 34 c 91 22 25 95 24 17 88 26 9 105 0 0 208 0 0 174 0 22 77 0 g 34 144 162 18 107 127 10 125 159 10 207 190 0 226 226 2 207 185 13 144 t 50 14 13 48 56 35 66 31 13 87 16 0 12 0 0 26 12 11 44 48
ERF076_MA1001.4_JASPAR_rc_shift8 (ERF076:MA1001.4:JASPAR_rc)	0.729	0.547	3.797	0.881	0.873	884	544	548	881	914	754.200	; assembly_17 versus ERF076_MA1001.4_JASPAR_rc (ERF076:MA1001.4:JASPAR_rc); m=194/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 754.2; --------GyGGCGGCGg-- ; cor=0.729; Ncor=0.547; logoDP=3.797; NsEucl=0.881; NSW=0.873; rcor=884; rNcor=544; rlogoDP=548; rNsEucl=881; rNSW=914; rank_mean=754.200; match_rank= a 0 0 0 0 0 0 0 0 157 81 18 74 24 6 9 38 109 224 0 0 c 0 0 0 0 0 0 0 0 45 435 11 9 1271 5 13 1270 63 181 0 0 g 0 0 0 0 0 0 0 0 1086 5 1304 1281 2 1346 1347 6 1008 830 0 0 t 0 0 0 0 0 0 0 0 85 852 40 9 76 16 4 59 193 138 0 0
ERF057_MA1753.2_JASPAR_rc_shift10 (ERF057:MA1753.2:JASPAR_rc)	0.755	0.503	0.366	0.897	0.894	747	706	972	648	700	754.600	; assembly_17 versus ERF057_MA1753.2_JASPAR_rc (ERF057:MA1753.2:JASPAR_rc); m=195/237; ncol2=14; w=0; offset=1; strand=R; shift=10; score= 754.6; ----------GGCGGyGGhG ; cor=0.755; Ncor=0.503; logoDP=0.366; NsEucl=0.897; NSW=0.894; rcor=747; rNcor=706; rlogoDP=972; rNsEucl=648; rNSW=700; rank_mean=754.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 92 171 33 0 0 10 3 59 337 93 c 0 0 0 0 0 0 0 0 0 0 0 12 874 0 0 578 12 45 389 31 g 0 0 0 0 0 0 0 0 0 0 856 694 3 1000 995 2 983 862 3 803 t 0 0 0 0 0 0 0 0 0 0 52 123 90 0 5 410 2 35 270 73
ERF2_M0038_1.02_CISBP_rc_shift12 (ERF2:M0038_1.02:CISBP_rc)	0.761	0.468	0.147	0.896	0.914	715	832	1077	667	485	755.200	; assembly_17 versus ERF2_M0038_1.02_CISBP_rc (ERF2:M0038_1.02:CISBP_rc); m=196/237; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 755.2; ------------tGgCGGCk ; cor=0.761; Ncor=0.468; logoDP=0.147; NsEucl=0.896; NSW=0.914; rcor=715; rNcor=832; rlogoDP=1077; rNsEucl=667; rNSW=485; rank_mean=755.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 22 11 21 4 9 7 6 15 c 0 0 0 0 0 0 0 0 0 0 0 0 22 9 15 78 4 14 72 24 g 0 0 0 0 0 0 0 0 0 0 0 0 22 68 46 2 70 69 8 32 t 0 0 0 0 0 0 0 0 0 0 0 0 34 12 18 16 17 10 14 29
CRF4_MA0976.3_JASPAR_rc_shift8 (CRF4:MA0976.3:JASPAR_rc)	0.729	0.546	3.748	0.881	0.874	888	548	555	879	907	755.400	; assembly_17 versus CRF4_MA0976.3_JASPAR_rc (CRF4:MA0976.3:JASPAR_rc); m=197/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 755.4; --------GyGGCGGCGg-- ; cor=0.729; Ncor=0.546; logoDP=3.748; NsEucl=0.881; NSW=0.874; rcor=888; rNcor=548; rlogoDP=555; rNsEucl=879; rNSW=907; rank_mean=755.400; match_rank= a 0 0 0 0 0 0 0 0 134 131 25 87 51 9 9 63 163 321 0 0 c 0 0 0 0 0 0 0 0 40 653 16 9 1734 15 22 1744 111 247 0 0 g 0 0 0 0 0 0 0 0 1659 12 1804 1794 2 1866 1865 4 1377 1167 0 0 t 0 0 0 0 0 0 0 0 67 1104 55 10 113 10 4 89 249 165 0 0
LBD4_M1274_1.02_CISBP_shift8 (LBD4:M1274_1.02:CISBP)	0.714	0.535	1.198	0.893	0.897	986	584	822	729	678	759.800	; assembly_17 versus LBD4_M1274_1.02_CISBP (LBD4:M1274_1.02:CISBP); m=198/237; ncol2=10; w=-1; offset=-1; strand=D; shift=8; score= 759.8; --------rahsCGgsrr-- ; cor=0.714; Ncor=0.535; logoDP=1.198; NsEucl=0.893; NSW=0.897; rcor=986; rNcor=584; rlogoDP=822; rNsEucl=729; rNSW=678; rank_mean=759.800; match_rank= a 0 0 0 0 0 0 0 0 39 47 25 20 7 6 9 21 28 30 0 0 c 0 0 0 0 0 0 0 0 20 11 35 36 76 14 23 30 18 18 0 0 g 0 0 0 0 0 0 0 0 29 24 14 37 15 78 64 36 36 30 0 0 t 0 0 0 0 0 0 0 0 12 18 26 7 2 2 4 13 18 22 0 0
EREB87_B73_1_m1_EEAD0357_EEADannot_shift9 (EREB87_B73_1_m1:EEAD0357:EEADannot)	0.709	0.520	4.828	0.889	0.865	1032	639	417	786	967	768.200	; assembly_17 versus EREB87_B73_1_m1_EEAD0357_EEADannot (EREB87_B73_1_m1:EEAD0357:EEADannot); m=199/237; ncol2=15; w=0; offset=0; strand=D; shift=9; score= 768.2; ---------cGGCGGCGGCG ; cor=0.709; Ncor=0.520; logoDP=4.828; NsEucl=0.889; NSW=0.865; rcor=1032; rNcor=639; rlogoDP=417; rNsEucl=786; rNSW=967; rank_mean=768.200; match_rank= a 0 0 0 0 0 0 0 0 0 10 4 8 5 2 4 3 0 4 6 3 c 0 0 0 0 0 0 0 0 0 57 0 6 86 1 3 89 1 12 84 0 g 0 0 0 0 0 0 0 0 0 13 93 86 1 96 91 0 98 84 2 97 t 0 0 0 0 0 0 0 0 0 20 3 0 8 1 2 8 1 0 8 0
EREB183_ZmPUCHI_B73_1_m1_EEAD0337_EEADannot_rc_shift11 (EREB183_ZmPUCHI_B73_1_m1:EEAD0337:EEADannot_rc)	0.784	0.415	0.768	0.894	0.900	590	1019	894	708	654	773.000	; assembly_17 versus EREB183_ZmPUCHI_B73_1_m1_EEAD0337_EEADannot_rc (EREB183_ZmPUCHI_B73_1_m1:EEAD0337:EEADannot_rc); m=200/237; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 773; -----------GCGGCGGCG ; cor=0.784; Ncor=0.415; logoDP=0.768; NsEucl=0.894; NSW=0.900; rcor=590; rNcor=1019; rlogoDP=894; rNsEucl=708; rNSW=654; rank_mean=773.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 17 2 2 4 2 2 9 5 5 c 0 0 0 0 0 0 0 0 0 0 0 5 88 4 1 92 2 8 76 1 g 0 0 0 0 0 0 0 0 0 0 0 70 4 92 92 0 94 77 7 92 t 0 0 0 0 0 0 0 0 0 0 0 8 6 2 3 6 2 6 12 2
ERF104_MA1239.1_JASPAR_rc_shift7 (ERF104:MA1239.1:JASPAR_rc)	0.743	0.430	0.937	0.902	0.895	802	955	868	554	697	775.200	; assembly_17 versus ERF104_MA1239.1_JASPAR_rc (ERF104:MA1239.1:JASPAR_rc); m=201/237; ncol2=19; w=-2; offset=-2; strand=R; shift=7; score= 775.2; -------rryGGCGGCGgmg ; cor=0.743; Ncor=0.430; logoDP=0.937; NsEucl=0.902; NSW=0.895; rcor=802; rNcor=955; rlogoDP=868; rNsEucl=554; rNSW=697; rank_mean=775.200; match_rank= a 0 0 0 0 0 0 0 149 192 62 0 89 3 0 0 25 5 90 169 75 c 0 0 0 0 0 0 0 60 51 281 0 0 527 0 2 496 6 76 213 33 g 0 0 0 0 0 0 0 218 274 0 553 466 0 557 555 0 464 369 50 363 t 0 0 0 0 0 0 0 130 40 214 4 2 27 0 0 36 82 22 125 86
ERF054_MA1232.2_JASPAR_shift10 (ERF054:MA1232.2:JASPAR)	0.722	0.525	4.588	0.872	0.868	927	616	442	965	948	779.600	; assembly_17 versus ERF054_MA1232.2_JASPAR (ERF054:MA1232.2:JASPAR); m=202/237; ncol2=8; w=0; offset=1; strand=D; shift=10; score= 779.6; ----------GdCGGyGg-- ; cor=0.722; Ncor=0.525; logoDP=4.588; NsEucl=0.872; NSW=0.868; rcor=927; rNcor=616; rlogoDP=442; rNsEucl=965; rNSW=948; rank_mean=779.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 11 153 1 0 0 0 23 77 0 0 c 0 0 0 0 0 0 0 0 0 0 3 21 564 0 2 213 12 96 0 0 g 0 0 0 0 0 0 0 0 0 0 546 199 0 567 565 0 484 374 0 0 t 0 0 0 0 0 0 0 0 0 0 7 194 2 0 0 354 48 20 0 0
EREB138_B73_1_m1_EEAD0331_EEADannot_rc_shift8 (EREB138_B73_1_m1:EEAD0331:EEADannot_rc)	0.715	0.524	0.687	0.899	0.887	978	623	905	625	780	782.200	; assembly_17 versus EREB138_B73_1_m1_EEAD0331_EEADannot_rc (EREB138_B73_1_m1:EEAD0331:EEADannot_rc); m=203/237; ncol2=15; w=-1; offset=-1; strand=R; shift=8; score= 782.2; --------rcGgCGGCGGCG ; cor=0.715; Ncor=0.524; logoDP=0.687; NsEucl=0.899; NSW=0.887; rcor=978; rNcor=623; rlogoDP=905; rNsEucl=625; rNSW=780; rank_mean=782.200; match_rank= a 0 0 0 0 0 0 0 0 30 14 6 21 8 3 17 4 1 16 0 7 c 0 0 0 0 0 0 0 0 8 62 10 9 71 0 2 88 0 3 90 1 g 0 0 0 0 0 0 0 0 44 12 77 60 2 97 78 0 97 78 2 91 t 0 0 0 0 0 0 0 0 18 12 7 10 19 0 3 8 2 3 8 1
RRTF1_RRTF1_ArabidopsisPBM_rc_shift9 (RRTF1:RRTF1:ArabidopsisPBM_rc)	0.701	0.638	0.908	0.887	0.872	1082	222	873	819	925	784.200	; assembly_17 versus RRTF1_RRTF1_ArabidopsisPBM_rc (RRTF1:RRTF1:ArabidopsisPBM_rc); m=204/237; ncol2=10; w=0; offset=0; strand=R; shift=9; score= 784.2; ---------TGGCGGCGsc- ; cor=0.701; Ncor=0.638; logoDP=0.908; NsEucl=0.887; NSW=0.872; rcor=1082; rNcor=222; rlogoDP=873; rNsEucl=819; rNSW=925; rank_mean=784.200; match_rank= a 0 0 0 0 0 0 0 0 0 8 2 9 0 0 0 0 0 1 15 0 c 0 0 0 0 0 0 0 0 0 21 0 1 99 1 17 99 1 66 46 0 g 0 0 0 0 0 0 0 0 0 2 77 86 1 98 83 1 94 29 15 0 t 0 0 0 0 0 0 0 0 0 69 21 4 0 1 0 0 5 4 24 0
EREB2_Mo17_1_EEAD0346_EEADannot_rc_shift10 (EREB2_Mo17_1:EEAD0346:EEADannot_rc)	0.737	0.461	2.981	0.891	0.881	835	853	641	762	837	785.600	; assembly_17 versus EREB2_Mo17_1_EEAD0346_EEADannot_rc (EREB2_Mo17_1:EEAD0346:EEADannot_rc); m=205/237; ncol2=15; w=0; offset=1; strand=R; shift=10; score= 785.6; ----------GrCGGCGGCG ; cor=0.737; Ncor=0.461; logoDP=2.981; NsEucl=0.891; NSW=0.881; rcor=835; rNcor=853; rlogoDP=641; rNsEucl=762; rNSW=837; rank_mean=785.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 4 25 13 3 7 1 0 8 6 3 c 0 0 0 0 0 0 0 0 0 0 10 8 71 0 0 95 1 4 86 0 g 0 0 0 0 0 0 0 0 0 0 79 60 2 97 89 0 97 85 0 96 t 0 0 0 0 0 0 0 0 0 0 7 7 14 0 4 4 2 3 8 1
HRD_M0019_1.02_CISBP_rc_shift12 (HRD:M0019_1.02:CISBP_rc)	0.723	0.482	1.384	0.889	0.901	920	774	799	798	640	786.200	; assembly_17 versus HRD_M0019_1.02_CISBP_rc (HRD:M0019_1.02:CISBP_rc); m=206/237; ncol2=9; w=0; offset=3; strand=R; shift=12; score= 786.2; ------------tGtCGGya ; cor=0.723; Ncor=0.482; logoDP=1.384; NsEucl=0.889; NSW=0.901; rcor=920; rNcor=774; rlogoDP=799; rNsEucl=798; rNSW=640; rank_mean=786.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 20 10 15 3 3 9 8 41 c 0 0 0 0 0 0 0 0 0 0 0 0 22 10 8 90 5 2 57 19 g 0 0 0 0 0 0 0 0 0 0 0 0 16 71 23 3 88 89 4 23 t 0 0 0 0 0 0 0 0 0 0 0 0 42 9 54 4 4 0 31 17
IG1_MA2418.1_JASPAR_rc_shift12 (IG1:MA2418.1:JASPAR_rc)	0.755	0.503	2.495	0.877	0.878	748	707	718	922	855	790.000	; assembly_17 versus IG1_MA2418.1_JASPAR_rc (IG1:MA2418.1:JASPAR_rc); m=207/237; ncol2=9; w=0; offset=3; strand=R; shift=12; score= 790; ------------TGGCGGCa ; cor=0.755; Ncor=0.503; logoDP=2.495; NsEucl=0.877; NSW=0.878; rcor=748; rNcor=707; rlogoDP=718; rNsEucl=922; rNSW=855; rank_mean=790.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 274 103 110 151 194 106 142 5426 c 0 0 0 0 0 0 0 0 0 0 0 0 1478 218 188 7736 237 293 7717 663 g 0 0 0 0 0 0 0 0 0 0 0 0 443 7732 7805 114 7586 7665 217 1865 t 0 0 0 0 0 0 0 0 0 0 0 0 5972 114 64 166 150 103 91 213
GEBP_UN0399.1_JASPAR_rc_shift11 (GEBP:UN0399.1:JASPAR_rc)	0.722	0.525	4.618	0.868	0.861	930	619	435	977	995	791.200	; assembly_17 versus GEBP_UN0399.1_JASPAR_rc (GEBP:UN0399.1:JASPAR_rc); m=208/237; ncol2=8; w=0; offset=2; strand=R; shift=11; score= 791.2; -----------cCGGCCGc- ; cor=0.722; Ncor=0.525; logoDP=4.618; NsEucl=0.868; NSW=0.861; rcor=930; rNcor=619; rlogoDP=435; rNsEucl=977; rNSW=995; rank_mean=791.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 240 135 25 0.25 50 0.25 0.27 214 0 c 0 0 0 0 0 0 0 0 0 0 0 560 810 0.25 0.25 949 999 0.27 607 0 g 0 0 0 0 0 0 0 0 0 0 0 40 0.27 974 999 0.25 0.25 972 36.02 0 t 0 0 0 0 0 0 0 0 0 0 0 160 54 0.25 0.25 0.25 0.25 27 143.01 0
AT5G18450_MA1226.1_JASPAR_shift4 (AT5G18450:MA1226.1:JASPAR)	0.707	0.442	5.000	0.890	0.878	1041	919	387	780	862	797.800	; assembly_17 versus AT5G18450_MA1226.1_JASPAR (AT5G18450:MA1226.1:JASPAR); m=209/237; ncol2=15; w=-5; offset=-5; strand=D; shift=4; score= 797.8; ----ggyggarGCGGYGGm- ; cor=0.707; Ncor=0.442; logoDP=5.000; NsEucl=0.890; NSW=0.878; rcor=1041; rNcor=919; rlogoDP=387; rNsEucl=780; rNSW=862; rank_mean=797.800; match_rank= a 0 0 0 0 95 88 137 84 98 304 185 34 21 0 0 25 0 54 237 0 c 0 0 0 0 41 54 179 49 42 133 0 0 509 0 0 156 0 38 156 0 g 0 0 0 0 357 371 58 312 386 12 395 531 0 587 587 0 584 491 50 0 t 0 0 0 0 94 74 213 142 61 138 7 22 57 0 0 406 3 4 144 0
CRF2_M0029_1.02_CISBP_rc_shift10 (CRF2:M0029_1.02:CISBP_rc)	0.759	0.552	0.485	0.876	0.878	722	530	946	927	864	797.800	; assembly_17 versus CRF2_M0029_1.02_CISBP_rc (CRF2:M0029_1.02:CISBP_rc); m=210/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 797.8; ----------GGCGGCGs-- ; cor=0.759; Ncor=0.552; logoDP=0.485; NsEucl=0.876; NSW=0.878; rcor=722; rNcor=530; rlogoDP=946; rNsEucl=927; rNSW=864; rank_mean=797.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 3 13 0 0 c 0 0 0 0 0 0 0 0 0 0 6 0 100 0 2 100 8 35 0 0 g 0 0 0 0 0 0 0 0 0 0 73 93 0 100 98 0 78 48 0 0 t 0 0 0 0 0 0 0 0 0 0 12 2 0 0 0 0 11 4 0 0
CRF2_MA0975.1_JASPAR_rc_shift10 (CRF2:MA0975.1:JASPAR_rc)	0.758	0.551	0.494	0.876	0.877	726	531	945	931	871	800.800	; assembly_17 versus CRF2_MA0975.1_JASPAR_rc (CRF2:MA0975.1:JASPAR_rc); m=211/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 800.8; ----------GGCGGCGs-- ; cor=0.758; Ncor=0.551; logoDP=0.494; NsEucl=0.876; NSW=0.877; rcor=726; rNcor=531; rlogoDP=945; rNsEucl=931; rNSW=871; rank_mean=800.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 88 46 0 0 0 0 27 131 0 0 c 0 0 0 0 0 0 0 0 0 0 59 0 999 0 23 999 81 348 0 0 g 0 0 0 0 0 0 0 0 0 0 735 931 0 999 977 0 783 478 0 0 t 0 0 0 0 0 0 0 0 0 0 118 23 0 0 0 0 108 44 0 0
AT4G00270_M1620_1.02_CISBP_shift11 (AT4G00270:M1620_1.02:CISBP)	0.721	0.524	4.339	0.868	0.861	941	624	466	978	999	801.600	; assembly_17 versus AT4G00270_M1620_1.02_CISBP (AT4G00270:M1620_1.02:CISBP); m=212/237; ncol2=8; w=0; offset=2; strand=D; shift=11; score= 801.6; -----------cCGGCCGc- ; cor=0.721; Ncor=0.524; logoDP=4.339; NsEucl=0.868; NSW=0.861; rcor=941; rNcor=624; rlogoDP=466; rNsEucl=978; rNSW=999; rank_mean=801.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 24 14 3 0 5 0 0 21 0 c 0 0 0 0 0 0 0 0 0 0 0 56 81 0 0 95 100 0 61 0 g 0 0 0 0 0 0 0 0 0 0 0 4 0 97 100 0 0 97 4 0 t 0 0 0 0 0 0 0 0 0 0 0 16 5 0 0 0 0 3 14 0
EREB145_ZmSHINE_B73_1_m1_EEAD0333_EEADannot_rc_shift11 (EREB145_ZmSHINE_B73_1_m1:EEAD0333:EEADannot_rc)	0.751	0.451	4.193	0.877	0.865	767	888	485	908	971	803.800	; assembly_17 versus EREB145_ZmSHINE_B73_1_m1_EEAD0333_EEADannot_rc (EREB145_ZmSHINE_B73_1_m1:EEAD0333:EEADannot_rc); m=213/237; ncol2=13; w=0; offset=2; strand=R; shift=11; score= 803.8; -----------GCGGCGGCG ; cor=0.751; Ncor=0.451; logoDP=4.193; NsEucl=0.877; NSW=0.865; rcor=767; rNcor=888; rlogoDP=485; rNsEucl=908; rNSW=971; rank_mean=803.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 6 2 0 1 3 0 4 6 2 c 0 0 0 0 0 0 0 0 0 0 0 0 90 0 1 83 0 3 87 1 g 0 0 0 0 0 0 0 0 0 0 0 92 1 99 96 0 100 92 1 96 t 0 0 0 0 0 0 0 0 0 0 0 2 7 1 2 14 0 1 6 1
JUB1_MA2017.2_JASPAR_shift11 (JUB1:MA2017.2:JASPAR)	0.747	0.475	4.683	0.860	0.864	786	801	430	1026	982	805.000	; assembly_17 versus JUB1_MA2017.2_JASPAR (JUB1:MA2017.2:JASPAR); m=214/237; ncol2=7; w=0; offset=2; strand=D; shift=11; score= 805; -----------ACGGCGa-- ; cor=0.747; Ncor=0.475; logoDP=4.683; NsEucl=0.860; NSW=0.864; rcor=786; rNcor=801; rlogoDP=430; rNsEucl=1026; rNSW=982; rank_mean=805.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 458 9 9 3 12 33 288 0 0 c 0 0 0 0 0 0 0 0 0 0 0 30 492 8 12 476 10 36 0 0 g 0 0 0 0 0 0 0 0 0 0 0 10 0 489 492 0 457 82 0 0 t 0 0 0 0 0 0 0 0 0 0 0 11 8 3 2 21 9 103 0 0
ERF15_MA1231.1_JASPAR_rc_shift8 (ERF15:MA1231.1:JASPAR_rc)	0.717	0.526	0.279	0.898	0.885	965	610	1020	642	808	809.000	; assembly_17 versus ERF15_MA1231.1_JASPAR_rc (ERF15:MA1231.1:JASPAR_rc); m=215/237; ncol2=15; w=-1; offset=-1; strand=R; shift=8; score= 809; --------ryGGCGGCKghg ; cor=0.717; Ncor=0.526; logoDP=0.279; NsEucl=0.898; NSW=0.885; rcor=965; rNcor=610; rlogoDP=1020; rNsEucl=642; rNSW=808; rank_mean=809.000; match_rank= a 0 0 0 0 0 0 0 0 205 66 1 26 5 0 0 11 0 134 198 140 c 0 0 0 0 0 0 0 0 33 322 0 0 575 0 0 550 8 69 172 9 g 0 0 0 0 0 0 0 0 332 0 593 570 0 572 596 0 432 369 45 335 t 0 0 0 0 0 0 0 0 26 208 2 0 16 24 0 35 156 24 181 112
RRTF1_RRTF1_3_ArabidopsisPBM_rc_shift8 (RRTF1:RRTF1_3:ArabidopsisPBM_rc)	0.716	0.537	3.493	0.876	0.863	971	580	582	924	990	809.400	; assembly_17 versus RRTF1_RRTF1_3_ArabidopsisPBM_rc (RRTF1:RRTF1_3:ArabidopsisPBM_rc); m=216/237; ncol2=10; w=-1; offset=-1; strand=R; shift=8; score= 809.4; --------aTGGCGGCGs-- ; cor=0.716; Ncor=0.537; logoDP=3.493; NsEucl=0.876; NSW=0.863; rcor=971; rNcor=580; rlogoDP=582; rNsEucl=924; rNSW=990; rank_mean=809.400; match_rank= a 0 0 0 0 0 0 0 0 67 7 6 11 0 1 0 1 1 4 0 0 c 0 0 0 0 0 0 0 0 3 8 0 1 98 0 3 99 2 60 0 0 g 0 0 0 0 0 0 0 0 8 4 77 81 1 97 97 0 92 30 0 0 t 0 0 0 0 0 0 0 0 22 81 17 7 1 2 0 0 5 6 0 0
CRF4_MA0976.1_JASPAR_rc_shift10 (CRF4:MA0976.1:JASPAR_rc)	0.748	0.544	0.522	0.876	0.877	776	551	942	932	873	814.800	; assembly_17 versus CRF4_MA0976.1_JASPAR_rc (CRF4:MA0976.1:JASPAR_rc); m=217/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 814.8; ----------GGCGGCGs-- ; cor=0.748; Ncor=0.544; logoDP=0.522; NsEucl=0.876; NSW=0.877; rcor=776; rNcor=551; rlogoDP=942; rNsEucl=932; rNSW=873; rank_mean=814.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 49 108 0 0 0 0 62 70 0 0 c 0 0 0 0 0 0 0 0 0 0 65 68 987 0 25 1000 62 535 0 0 g 0 0 0 0 0 0 0 0 0 0 790 756 13 1000 974 0 769 326 0 0 t 0 0 0 0 0 0 0 0 0 0 97 68 0 0 0 0 108 70 0 0
CRF4_M0033_1.02_CISBP_rc_shift10 (CRF4:M0033_1.02:CISBP_rc)	0.748	0.544	0.522	0.876	0.876	780	557	943	935	876	818.200	; assembly_17 versus CRF4_M0033_1.02_CISBP_rc (CRF4:M0033_1.02:CISBP_rc); m=218/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 818.2; ----------GGCGGCGs-- ; cor=0.748; Ncor=0.544; logoDP=0.522; NsEucl=0.876; NSW=0.876; rcor=780; rNcor=557; rlogoDP=943; rNsEucl=935; rNSW=876; rank_mean=818.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 6 7 0 0 c 0 0 0 0 0 0 0 0 0 0 6 6 99 0 3 100 6 53 0 0 g 0 0 0 0 0 0 0 0 0 0 79 76 1 100 97 0 77 33 0 0 t 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 11 7 0 0
AT3G23230_M0024_1.02_CISBP_rc_shift10 (AT3G23230:M0024_1.02:CISBP_rc)	0.724	0.526	0.290	0.884	0.893	914	609	1006	842	724	819.000	; assembly_17 versus AT3G23230_M0024_1.02_CISBP_rc (AT3G23230:M0024_1.02:CISBP_rc); m=219/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 819; ----------GgCGGCks-- ; cor=0.724; Ncor=0.526; logoDP=0.290; NsEucl=0.884; NSW=0.893; rcor=914; rNcor=609; rlogoDP=1006; rNsEucl=842; rNSW=724; rank_mean=819.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 10 19 1 7 6 4 17 20 0 0 c 0 0 0 0 0 0 0 0 0 0 10 17 76 1 16 80 22 27 0 0 g 0 0 0 0 0 0 0 0 0 0 68 45 4 77 75 6 36 32 0 0 t 0 0 0 0 0 0 0 0 0 0 12 19 19 15 3 10 25 21 0 0
DREB2D_MA1250.2_JASPAR_rc_shift10 (DREB2D:MA1250.2:JASPAR_rc)	0.734	0.489	0.279	0.895	0.889	860	757	1019	700	769	821.000	; assembly_17 versus DREB2D_MA1250.2_JASPAR_rc (DREB2D:MA1250.2:JASPAR_rc); m=220/237; ncol2=14; w=0; offset=1; strand=R; shift=10; score= 821; ----------GgCGGYGGmg ; cor=0.734; Ncor=0.489; logoDP=0.279; NsEucl=0.895; NSW=0.889; rcor=860; rNcor=757; rlogoDP=1019; rNsEucl=700; rNSW=769; rank_mean=821.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 133 107 6 0 2 1 0 31 221 93 c 0 0 0 0 0 0 0 0 0 0 8 10 519 0 1 160 0 18 205 30 g 0 0 0 0 0 0 0 0 0 0 395 366 0 556 554 0 551 489 13 360 t 0 0 0 0 0 0 0 0 0 0 21 74 32 1 0 396 6 19 118 74
ERF098_MA0999.1_JASPAR_rc_shift10 (ERF098:MA0999.1:JASPAR_rc)	0.722	0.525	0.294	0.884	0.892	929	618	1004	844	733	825.600	; assembly_17 versus ERF098_MA0999.1_JASPAR_rc (ERF098:MA0999.1:JASPAR_rc); m=221/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 825.6; ----------ggCGGCgs-- ; cor=0.722; Ncor=0.525; logoDP=0.294; NsEucl=0.884; NSW=0.892; rcor=929; rNcor=618; rlogoDP=1004; rNsEucl=844; rNSW=733; rank_mean=825.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 98 192 13 70 62 37 173 198 0 0 c 0 0 0 0 0 0 0 0 0 0 99 170 756 10 166 804 222 270 0 0 g 0 0 0 0 0 0 0 0 0 0 677 448 39 769 746 63 356 317 0 0 t 0 0 0 0 0 0 0 0 0 0 125 190 192 151 26 96 248 215 0 0
EREB183_ZmPUCHI_Mo17_1_EEAD0338_EEADannot_rc_shift11 (EREB183_ZmPUCHI_Mo17_1:EEAD0338:EEADannot_rc)	0.775	0.410	0.742	0.889	0.889	648	1041	900	788	764	828.200	; assembly_17 versus EREB183_ZmPUCHI_Mo17_1_EEAD0338_EEADannot_rc (EREB183_ZmPUCHI_Mo17_1:EEAD0338:EEADannot_rc); m=222/237; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 828.2; -----------GCGGCGGCG ; cor=0.775; Ncor=0.410; logoDP=0.742; NsEucl=0.889; NSW=0.889; rcor=648; rNcor=1041; rlogoDP=900; rNsEucl=788; rNSW=764; rank_mean=828.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 15 4 3 9 2 2 5 4 3 c 0 0 0 0 0 0 0 0 0 0 0 4 84 0 1 94 0 0 84 0 g 0 0 0 0 0 0 0 0 0 0 0 69 4 93 88 0 97 90 3 95 t 0 0 0 0 0 0 0 0 0 0 0 12 8 4 2 4 1 5 9 2
LBD16_RA2_Mo17_1_EEAD0420_EEADannot_rc_shift10 (LBD16_RA2_Mo17_1:EEAD0420:EEADannot_rc)	0.726	0.454	4.136	0.881	0.859	902	875	501	883	1006	833.400	; assembly_17 versus LBD16_RA2_Mo17_1_EEAD0420_EEADannot_rc (LBD16_RA2_Mo17_1:EEAD0420:EEADannot_rc); m=223/237; ncol2=15; w=0; offset=1; strand=R; shift=10; score= 833.4; ----------GGCGGCGGCG ; cor=0.726; Ncor=0.454; logoDP=4.136; NsEucl=0.881; NSW=0.859; rcor=902; rNcor=875; rlogoDP=501; rNsEucl=883; rNSW=1006; rank_mean=833.400; match_rank= a 0 0 0 0 0 0 0 0 0 0 6 1 2 1 3 9 2 0 8 0 c 0 0 0 0 0 0 0 0 0 0 6 9 98 1 14 86 0 2 87 1 g 0 0 0 0 0 0 0 0 0 0 84 90 0 96 81 3 97 98 3 97 t 0 0 0 0 0 0 0 0 0 0 4 0 0 2 2 2 1 0 2 2
EREB149_Mo17_1_EEAD0336_EEADannot_shift10 (EREB149_Mo17_1:EEAD0336:EEADannot)	0.702	0.468	4.167	0.884	0.864	1078	833	490	846	973	844.000	; assembly_17 versus EREB149_Mo17_1_EEAD0336_EEADannot (EREB149_Mo17_1:EEAD0336:EEADannot); m=224/237; ncol2=14; w=0; offset=1; strand=D; shift=10; score= 844; ----------GGCGGCGGCG ; cor=0.702; Ncor=0.468; logoDP=4.167; NsEucl=0.884; NSW=0.864; rcor=1078; rNcor=833; rlogoDP=490; rNsEucl=846; rNSW=973; rank_mean=844.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 3 17 4 6 12 5 1 12 6 4 c 0 0 0 0 0 0 0 0 0 0 4 0 86 0 2 82 0 3 86 0 g 0 0 0 0 0 0 0 0 0 0 85 79 1 90 84 1 97 83 2 95 t 0 0 0 0 0 0 0 0 0 0 8 4 9 4 2 12 2 2 6 1
ERF1_ERF1_ArabidopsisPBM_rc_shift12 (ERF1:ERF1:ArabidopsisPBM_rc)	0.770	0.474	0.248	0.879	0.882	669	812	1041	902	826	850.000	; assembly_17 versus ERF1_ERF1_ArabidopsisPBM_rc (ERF1:ERF1:ArabidopsisPBM_rc); m=225/237; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 850; ------------tGGCGGCG ; cor=0.770; Ncor=0.474; logoDP=0.248; NsEucl=0.879; NSW=0.882; rcor=669; rNcor=812; rlogoDP=1041; rNsEucl=902; rNSW=826; rank_mean=850.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 13 1 3 1 1 1 1 2 c 0 0 0 0 0 0 0 0 0 0 0 0 24 1 2 97 0 2 97 1 g 0 0 0 0 0 0 0 0 0 0 0 0 5 97 90 0 95 96 1 82 t 0 0 0 0 0 0 0 0 0 0 0 0 58 1 5 2 4 1 1 15
ERF13_MA1254.1_JASPAR_rc_shift8 (ERF13:MA1254.1:JASPAR_rc)	0.701	0.514	0.358	0.895	0.879	1081	666	974	688	848	851.400	; assembly_17 versus ERF13_MA1254.1_JASPAR_rc (ERF13:MA1254.1:JASPAR_rc); m=226/237; ncol2=15; w=-1; offset=-1; strand=R; shift=8; score= 851.4; --------rwaayGGCGGCk ; cor=0.701; Ncor=0.514; logoDP=0.358; NsEucl=0.895; NSW=0.879; rcor=1081; rNcor=666; rlogoDP=974; rNsEucl=688; rNSW=848; rank_mean=851.400; match_rank= a 0 0 0 0 0 0 0 0 178 253 267 345 103 0 32 0 0 0 0 1 c 0 0 0 0 0 0 0 0 77 127 37 16 151 0 0 567 0 0 567 28 g 0 0 0 0 0 0 0 0 231 47 126 124 7 570 518 0 570 570 0 300 t 0 0 0 0 0 0 0 0 84 143 140 85 309 0 20 3 0 0 3 241
CRF4_MA0976.2_JASPAR_rc_shift6 (CRF4:MA0976.2:JASPAR_rc)	0.729	0.468	1.834	0.881	0.874	888	830	761	879	907	853.000	; assembly_17 versus CRF4_MA0976.2_JASPAR_rc (CRF4:MA0976.2:JASPAR_rc); m=227/237; ncol2=12; w=-3; offset=-3; strand=R; shift=6; score= 853; ------ygGyGGCGGCGg-- ; cor=0.729; Ncor=0.468; logoDP=1.834; NsEucl=0.881; NSW=0.874; rcor=888; rNcor=830; rlogoDP=761; rNsEucl=879; rNSW=907; rank_mean=853.000; match_rank= a 0 0 0 0 0 0 363 369 134 131 25 87 51 9 9 63 163 321 0 0 c 0 0 0 0 0 0 757 198 40 653 16 9 1734 15 22 1744 111 247 0 0 g 0 0 0 0 0 0 168 1002 1659 12 1804 1794 2 1866 1865 4 1377 1167 0 0 t 0 0 0 0 0 0 612 331 67 1104 55 10 113 10 4 89 249 165 0 0
EREB46_ZmSHINE_B73_1_m1_EEAD0349_EEADannot_shift10 (EREB46_ZmSHINE_B73_1_m1:EEAD0349:EEADannot)	0.702	0.439	4.147	0.886	0.869	1079	929	498	828	941	855.000	; assembly_17 versus EREB46_ZmSHINE_B73_1_m1_EEAD0349_EEADannot (EREB46_ZmSHINE_B73_1_m1:EEAD0349:EEADannot); m=228/237; ncol2=15; w=0; offset=1; strand=D; shift=10; score= 855; ----------GGCGGCGGCG ; cor=0.702; Ncor=0.439; logoDP=4.147; NsEucl=0.886; NSW=0.869; rcor=1079; rNcor=929; rlogoDP=498; rNsEucl=828; rNSW=941; rank_mean=855.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 7 13 9 2 9 5 1 6 9 2 c 0 0 0 0 0 0 0 0 0 0 9 0 77 0 3 71 0 2 77 2 g 0 0 0 0 0 0 0 0 0 0 79 82 1 95 83 3 99 88 2 96 t 0 0 0 0 0 0 0 0 0 0 5 5 13 3 5 21 0 4 12 0
ERF11_MA1001.3_JASPAR_rc_shift6 (ERF11:MA1001.3:JASPAR_rc)	0.729	0.469	1.610	0.881	0.873	884	829	782	881	914	858.000	; assembly_17 versus ERF11_MA1001.3_JASPAR_rc (ERF11:MA1001.3:JASPAR_rc); m=229/237; ncol2=12; w=-3; offset=-3; strand=R; shift=6; score= 858; ------ygGyGGCGGCGg-- ; cor=0.729; Ncor=0.469; logoDP=1.610; NsEucl=0.881; NSW=0.873; rcor=884; rNcor=829; rlogoDP=782; rNsEucl=881; rNSW=914; rank_mean=858.000; match_rank= a 0 0 0 0 0 0 290 286 157 81 18 74 24 6 9 38 109 224 0 0 c 0 0 0 0 0 0 522 144 45 435 11 9 1271 5 13 1270 63 181 0 0 g 0 0 0 0 0 0 126 653 1086 5 1304 1281 2 1346 1347 6 1008 830 0 0 t 0 0 0 0 0 0 435 290 85 852 40 9 76 16 4 59 193 138 0 0
ETHYLENE_1gcc_A_3D-footprint_shift12 (ETHYLENE:1gcc_A:3D-footprint)	0.709	0.473	4.983	0.861	0.845	1029	817	392	1024	1052	862.800	; assembly_17 versus ETHYLENE_1gcc_A_3D-footprint (ETHYLENE:1gcc_A:3D-footprint); m=230/237; ncol2=9; w=0; offset=3; strand=D; shift=12; score= 862.8; ------------TGGCGGCT ; cor=0.709; Ncor=0.473; logoDP=4.983; NsEucl=0.861; NSW=0.845; rcor=1029; rNcor=817; rlogoDP=392; rNsEucl=1024; rNSW=1052; rank_mean=862.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 8 0 8 0 0 0 0 8 c 0 0 0 0 0 0 0 0 0 0 0 0 8 0 8 96 0 0 96 0 g 0 0 0 0 0 0 0 0 0 0 0 0 8 96 72 0 96 96 0 8 t 0 0 0 0 0 0 0 0 0 0 0 0 72 0 8 0 0 0 0 80
RAP2-3_MA1051.1_JASPAR_rc_shift10 (RAP2-3:MA1051.1:JASPAR_rc)	0.719	0.523	0.613	0.874	0.874	949	629	919	948	906	870.200	; assembly_17 versus RAP2-3_MA1051.1_JASPAR_rc (RAP2-3:MA1051.1:JASPAR_rc); m=231/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 870.2; ----------kGCGGCGc-- ; cor=0.719; Ncor=0.523; logoDP=0.613; NsEucl=0.874; NSW=0.874; rcor=949; rNcor=629; rlogoDP=919; rNsEucl=948; rNSW=906; rank_mean=870.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 73 85 15 3 4 5 58 107 0 0 c 0 0 0 0 0 0 0 0 0 0 6 26 976 4 244 982 33 543 0 0 g 0 0 0 0 0 0 0 0 0 0 664 780 3 977 746 6 761 232 0 0 t 0 0 0 0 0 0 0 0 0 0 257 109 6 16 6 7 147 119 0 0
EREB145_ZmSHINE_Mo17_1_EEAD0334_EEADannot_rc_shift11 (EREB145_ZmSHINE_Mo17_1:EEAD0334:EEADannot_rc)	0.763	0.404	0.769	0.883	0.877	706	1070	893	850	867	877.200	; assembly_17 versus EREB145_ZmSHINE_Mo17_1_EEAD0334_EEADannot_rc (EREB145_ZmSHINE_Mo17_1:EEAD0334:EEADannot_rc); m=232/237; ncol2=15; w=0; offset=2; strand=R; shift=11; score= 877.2; -----------GCGGCGGCG ; cor=0.763; Ncor=0.404; logoDP=0.769; NsEucl=0.883; NSW=0.877; rcor=706; rNcor=1070; rlogoDP=893; rNsEucl=850; rNSW=867; rank_mean=877.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 12 6 1 4 2 0 3 5 0 c 0 0 0 0 0 0 0 0 0 0 0 2 83 0 0 86 1 2 83 1 g 0 0 0 0 0 0 0 0 0 0 0 80 4 98 94 0 99 93 3 98 t 0 0 0 0 0 0 0 0 0 0 0 6 7 1 2 12 0 2 9 1
RAP2.2_M0021_1.02_CISBP_rc_shift13 (RAP2.2:M0021_1.02:CISBP_rc)	0.716	0.417	0.094	0.883	0.905	974	1010	1083	847	591	901.000	; assembly_17 versus RAP2.2_M0021_1.02_CISBP_rc (RAP2.2:M0021_1.02:CISBP_rc); m=233/237; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 901; -------------gsCrscm ; cor=0.716; Ncor=0.417; logoDP=0.094; NsEucl=0.883; NSW=0.905; rcor=974; rNcor=1010; rlogoDP=1083; rNsEucl=847; rNSW=591; rank_mean=901.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 19 24 1 33 14 13 28 c 0 0 0 0 0 0 0 0 0 0 0 0 0 23 28 78 0 25 58 26 g 0 0 0 0 0 0 0 0 0 0 0 0 0 35 33 0 66 50 7 22 t 0 0 0 0 0 0 0 0 0 0 0 0 0 23 15 21 1 11 22 24
ERF109_MA1053.1_JASPAR_rc_shift10 (ERF109:MA1053.1:JASPAR_rc)	0.715	0.520	0.873	0.866	0.856	976	637	881	998	1023	903.000	; assembly_17 versus ERF109_MA1053.1_JASPAR_rc (ERF109:MA1053.1:JASPAR_rc); m=234/237; ncol2=8; w=0; offset=1; strand=R; shift=10; score= 903; ----------GGCGGCGs-- ; cor=0.715; Ncor=0.520; logoDP=0.873; NsEucl=0.866; NSW=0.856; rcor=976; rNcor=637; rlogoDP=881; rNsEucl=998; rNSW=1023; rank_mean=903.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 18 86 5 3 2 3 6 13 0 0 c 0 0 0 0 0 0 0 0 0 0 2 13 978 2 168 989 8 661 0 0 g 0 0 0 0 0 0 0 0 0 0 773 862 13 982 827 5 936 287 0 0 t 0 0 0 0 0 0 0 0 0 0 207 38 4 13 3 3 50 38 0 0
DEAR4_DEAR4_2_ArabidopsisPBM_rc_shift12 (DEAR4:DEAR4_2:ArabidopsisPBM_rc)	0.732	0.450	0.701	0.873	0.872	875	890	904	951	924	908.800	; assembly_17 versus DEAR4_DEAR4_2_ArabidopsisPBM_rc (DEAR4:DEAR4_2:ArabidopsisPBM_rc); m=235/237; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 908.8; ------------aGGCGGCG ; cor=0.732; Ncor=0.450; logoDP=0.701; NsEucl=0.873; NSW=0.872; rcor=875; rNcor=890; rlogoDP=904; rNsEucl=951; rNSW=924; rank_mean=908.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 61 9 7 3 1 0 1 2 c 0 0 0 0 0 0 0 0 0 0 0 0 15 2 9 95 1 8 87 2 g 0 0 0 0 0 0 0 0 0 0 0 0 20 86 83 1 98 91 0 94 t 0 0 0 0 0 0 0 0 0 0 0 0 4 3 1 1 0 1 12 2
ORA47_ORA47_2_ArabidopsisPBM_rc_shift12 (ORA47:ORA47_2:ArabidopsisPBM_rc)	0.721	0.444	0.584	0.871	0.867	935	915	928	969	959	941.200	; assembly_17 versus ORA47_ORA47_2_ArabidopsisPBM_rc (ORA47:ORA47_2:ArabidopsisPBM_rc); m=236/237; ncol2=10; w=0; offset=3; strand=R; shift=12; score= 941.2; ------------rGkCGGCG ; cor=0.721; Ncor=0.444; logoDP=0.584; NsEucl=0.871; NSW=0.867; rcor=935; rNcor=915; rlogoDP=928; rNsEucl=969; rNSW=959; rank_mean=941.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 42 2 5 1 0 0 0 4 c 0 0 0 0 0 0 0 0 0 0 0 0 12 1 5 98 1 3 92 2 g 0 0 0 0 0 0 0 0 0 0 0 0 25 93 65 0 98 97 1 93 t 0 0 0 0 0 0 0 0 0 0 0 0 21 4 25 1 1 0 7 1
ERF012_MA1248.2_JASPAR_rc_shift13 (ERF012:MA1248.2:JASPAR_rc)	0.752	0.439	0.228	0.859	0.861	764	928	1047	1028	994	952.200	; assembly_17 versus ERF012_MA1248.2_JASPAR_rc (ERF012:MA1248.2:JASPAR_rc); m=237/237; ncol2=8; w=0; offset=4; strand=R; shift=13; score= 952.2; -------------GkCGGTG ; cor=0.752; Ncor=0.439; logoDP=0.228; NsEucl=0.859; NSW=0.861; rcor=764; rNcor=928; rlogoDP=1047; rNsEucl=1028; rNSW=994; rank_mean=952.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 10 98 0 0 0 2 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 563 0 0 36 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 558 171 1 567 568 0 568 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 299 4 1 0 530 0

One-to-n matrix alignment; reference matrix: assembly_3_shift2 ; 35 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
assembly_3_shift2 (assembly_3)
; assembly_3; m=0 (reference); ncol1=11; shift=2; ncol=13; --wwTGGACCAww ; Alignment reference a 0 0 586 566 72 88 140 1462 97 122 1670 726 668 c 0 0 272 228 35 46 43 100 1530 1562 43 287 305 g 0 0 331 320 66 1520 1555 100 62 38 41 236 287 t 0 0 609 684 1625 144 60 136 109 76 44 549 538

Zm00001d038683_MA1828.1_JASPAR_rc_shift2 (Zm00001d038683:MA1828.1:JASPAR_rc) 0.876 0.803 2.066 0.934 0.953 164 21 737 106 118 229.200
; assembly_3 versus Zm00001d038683_MA1828.1_JASPAR_rc (Zm00001d038683:MA1828.1:JASPAR_rc); m=1/34; ncol2=12; w=0; offset=0; strand=R; shift=2; score= 229.2; --sstGGACCACs ; cor=0.876; Ncor=0.803; logoDP=2.066; NsEucl=0.934; NSW=0.953; rcor=164; rNcor=21; rlogoDP=737; rNsEucl=106; rNSW=118; rank_mean=229.200; match_rank= a 0 0 355 372 221 8 4 1462 9 15 1664 58 385 c 0 0 654 550 189 18 28 111 1768 1727 50 1406 521 g 0 0 492 569 265 1746 1755 85 9 42 65 197 540 t 0 0 295 305 1121 24 9 138 10 12 17 135 350

Zm00001d038683_MA1828.2_JASPAR_rc_shift4 (Zm00001d038683:MA1828.2:JASPAR_rc) 0.909 0.661 2.065 0.923 0.952 96 171 738 190 121 263.200
; assembly_3 versus Zm00001d038683_MA1828.2_JASPAR_rc (Zm00001d038683:MA1828.2:JASPAR_rc); m=2/34; ncol2=8; w=0; offset=2; strand=R; shift=4; score= 263.2; ----tGGACCAC- ; cor=0.909; Ncor=0.661; logoDP=2.065; NsEucl=0.923; NSW=0.952; rcor=96; rNcor=171; rlogoDP=738; rNsEucl=190; rNSW=121; rank_mean=263.200; match_rank= a 0 0 0 0 221 8 4 1462 9 15 1664 58 0 c 0 0 0 0 189 18 28 111 1768 1727 50 1406 0 g 0 0 0 0 265 1746 1755 85 9 42 65 197 0 t 0 0 0 0 1121 24 9 138 10 12 17 135 0

TCP3_M1645_1.02_CISBP_shift3 (TCP3:M1645_1.02:CISBP) 0.797 0.725 3.501 0.915 0.928 511 64 580 292 318 353.000
; assembly_3 versus TCP3_M1645_1.02_CISBP (TCP3:M1645_1.02:CISBP); m=3/34; ncol2=10; w=0; offset=1; strand=D; shift=3; score= 353; ---kgGGaCCAch ; cor=0.797; Ncor=0.725; logoDP=3.501; NsEucl=0.915; NSW=0.928; rcor=511; rNcor=64; rlogoDP=580; rNsEucl=292; rNSW=318; rank_mean=353.000; match_rank= a 0 0 0 17 17 3 3 62 2 3 80 8 28 c 0 0 0 24 5 2 12 24 96 97 7 67 30 g 0 0 0 31 58 91 80 3 2 0 11 11 16 t 0 0 0 28 20 4 5 11 0 0 2 14 26

LjT20A21.20.nc_M1663_1.02_CISBP_shift4 (LjT20A21.20.nc:M1663_1.02:CISBP) 0.832 0.605 5.529 0.893 0.909 341 325 289 719 535 441.800
; assembly_3 versus LjT20A21.20.nc_M1663_1.02_CISBP (LjT20A21.20.nc:M1663_1.02:CISBP); m=4/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score= 441.8; ----GGGACCAy- ; cor=0.832; Ncor=0.605; logoDP=5.529; NsEucl=0.893; NSW=0.909; rcor=341; rNcor=325; rlogoDP=289; rNsEucl=719; rNSW=535; rank_mean=441.800; match_rank= a 0 0 0 0 5 0 0 93 0 0 88 6 0 c 0 0 0 0 0 0 0 7 100 100 4 59 0 g 0 0 0 0 75 100 100 0 0 0 8 6 0 t 0 0 0 0 20 0 0 0 0 0 0 29 0

TCP3.ampDAP_M0750_AthalianaCistrome_shift1 (TCP3.ampDAP:M0750:AthalianaCistrome) 0.737 0.676 5.882 0.895 0.879 836 140 240 687 847 550.000
; assembly_3 versus TCP3.ampDAP_M0750_AthalianaCistrome (TCP3.ampDAP:M0750:AthalianaCistrome); m=5/34; ncol2=12; w=-1; offset=-1; strand=D; shift=1; score= 550; -dtkGGGACCACh ; cor=0.737; Ncor=0.676; logoDP=5.882; NsEucl=0.895; NSW=0.879; rcor=836; rNcor=140; rlogoDP=240; rNsEucl=687; rNSW=847; rank_mean=550.000; match_rank= a 0 168 138 80 5 0 0 543 0 0 584 11 215 c 0 72 106 89 0 0 0 34 592 592 1 553 161 g 0 204 69 197 563 592 592 0 0 0 7 9 47 t 0 148 279 226 24 0 0 15 0 0 0 19 169

PTF1.ampDAP_M0760_AthalianaCistrome_rc_shift1 (PTF1.ampDAP:M0760:AthalianaCistrome_rc) 0.748 0.633 5.181 0.899 0.887 782 231 348 620 778 551.800
; assembly_3 versus PTF1.ampDAP_M0760_AthalianaCistrome_rc (PTF1.ampDAP:M0760:AthalianaCistrome_rc); m=6/34; ncol2=13; w=-1; offset=-1; strand=R; shift=1; score= 551.8; -ktkGGGACCACw ; cor=0.748; Ncor=0.633; logoDP=5.181; NsEucl=0.899; NSW=0.887; rcor=782; rNcor=231; rlogoDP=348; rNsEucl=620; rNSW=778; rank_mean=551.800; match_rank= a 0 120 100 65 55 0 0 464 0 1 514 15 240 c 0 67 66 89 0 0 0 40 527 526 1 489 94 g 0 204 82 194 445 527 527 0 0 0 10 7 27 t 0 136 279 179 27 0 0 23 0 0 2 16 166

LEAFY_EEAD0005_EEADannot_rc_shift0 (LEAFY:EEAD0005:EEADannot_rc) 0.796 0.461 0.567 0.920 0.929 519 851 931 232 304 567.400
; assembly_3 versus LEAFY_EEAD0005_EEADannot_rc (LEAFY:EEAD0005:EEADannot_rc); m=7/34; ncol2=19; w=-2; offset=-2; strand=R; shift=0; score= 567.4; wwtwTkGwCCrtT ; cor=0.796; Ncor=0.461; logoDP=0.567; NsEucl=0.920; NSW=0.929; rcor=519; rNcor=851; rlogoDP=931; rNsEucl=232; rNSW=304; rank_mean=567.400; match_rank= a 111 96 50 144 27 21 35 208 7 7 166 62 15 c 65 66 62 5 24 3 2 15 353 333 6 43 24 g 80 65 39 13 16 223 327 6 2 2 151 18 8 t 116 145 221 210 305 125 8 143 10 30 49 249 325

TCP24_MA1286.1_JASPAR_shift1 (TCP24:MA1286.1:JASPAR) 0.729 0.668 5.628 0.895 0.879 886 155 271 694 851 571.400
; assembly_3 versus TCP24_MA1286.1_JASPAR (TCP24:MA1286.1:JASPAR); m=8/34; ncol2=12; w=-1; offset=-1; strand=D; shift=1; score= 571.4; -rtkGGGACCACh ; cor=0.729; Ncor=0.668; logoDP=5.628; NsEucl=0.895; NSW=0.879; rcor=886; rNcor=155; rlogoDP=271; rNsEucl=694; rNSW=851; rank_mean=571.400; match_rank= a 0 153 113 74 12 0 0 527 0 0 567 16 195 c 0 81 108 100 11 0 0 24 594 594 0 560 192 g 0 214 94 196 553 593 594 26 0 0 27 9 40 t 0 146 279 224 18 1 0 17 0 0 0 9 167

TCP3_MA1289.1_JASPAR_shift1 (TCP3:MA1289.1:JASPAR) 0.720 0.609 5.555 0.893 0.873 946 309 283 734 913 637.000
; assembly_3 versus TCP3_MA1289.1_JASPAR (TCP3:MA1289.1:JASPAR); m=9/34; ncol2=13; w=-1; offset=-1; strand=D; shift=1; score= 637; -rtkGGGACCACh ; cor=0.720; Ncor=0.609; logoDP=5.555; NsEucl=0.893; NSW=0.873; rcor=946; rNcor=309; rlogoDP=283; rNsEucl=734; rNSW=913; rank_mean=637.000; match_rank= a 0 165 122 58 2 0 0 503 0 0 544 1 215 c 0 69 95 89 2 0 0 51 582 582 0 561 154 g 0 209 77 185 563 582 582 0 0 0 38 6 51 t 0 139 288 250 15 0 0 28 0 0 0 14 162

ARALYDRAFT_897773_MA1054.1_JASPAR_shift2 (ARALYDRAFT_897773:MA1054.1:JASPAR) 0.703 0.639 4.282 0.887 0.873 1075 219 472 814 917 699.400
; assembly_3 versus ARALYDRAFT_897773_MA1054.1_JASPAR (ARALYDRAFT_897773:MA1054.1:JASPAR); m=10/34; ncol2=10; w=0; offset=0; strand=D; shift=2; score= 699.4; --ykGGGACCAC- ; cor=0.703; Ncor=0.639; logoDP=4.282; NsEucl=0.887; NSW=0.873; rcor=1075; rNcor=219; rlogoDP=472; rNsEucl=814; rNSW=917; rank_mean=699.400; match_rank= a 0 0 92 27 36 17 40 756 2 1 862 20 0 c 0 0 278 79 4 7 125 215 949 995 2 907 0 g 0 0 167 491 877 957 826 7 47 2 132 6 0 t 0 0 463 402 83 19 9 22 2 1 4 67 0

scaffold_301743.1_M1659_1.02_CISBP_shift2 (scaffold_301743.1:M1659_1.02:CISBP) 0.703 0.639 4.349 0.887 0.872 1076 220 465 816 921 699.600
; assembly_3 versus scaffold_301743.1_M1659_1.02_CISBP (scaffold_301743.1:M1659_1.02:CISBP); m=11/34; ncol2=10; w=0; offset=0; strand=D; shift=2; score= 699.6; --ykGGGACCAC- ; cor=0.703; Ncor=0.639; logoDP=4.349; NsEucl=0.887; NSW=0.872; rcor=1076; rNcor=220; rlogoDP=465; rNsEucl=816; rNSW=921; rank_mean=699.600; match_rank= a 0 0 9 3 4 2 4 76 0 0 87 1 0 c 0 0 28 8 0 1 12 21 95 100 0 91 0 g 0 0 17 49 88 95 83 1 5 0 13 1 0 t 0 0 46 40 8 2 1 2 0 0 0 7 0

TCP4_MA1035.1_JASPAR_shift4 (TCP4:MA1035.1:JASPAR) 0.758 0.551 5.763 0.866 0.857 727 533 257 991 1016 704.800
; assembly_3 versus TCP4_MA1035.1_JASPAR (TCP4:MA1035.1:JASPAR); m=12/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score= 704.8; ----GGGACCAC- ; cor=0.758; Ncor=0.551; logoDP=5.763; NsEucl=0.866; NSW=0.857; rcor=727; rNcor=533; rlogoDP=257; rNsEucl=991; rNSW=1016; rank_mean=704.800; match_rank= a 0 0 0 0 112 1 1 831 1 1 997 1 0 c 0 0 0 0 1 1 1 167 998 998 1 996 0 g 0 0 0 0 775 998 998 1 1 1 1 1 0 t 0 0 0 0 112 1 1 1 1 1 1 1 0

MEE35_M1646_1.02_CISBP_shift4 (MEE35:M1646_1.02:CISBP) 0.757 0.550 5.875 0.866 0.856 733 535 241 999 1024 706.400
; assembly_3 versus MEE35_M1646_1.02_CISBP (MEE35:M1646_1.02:CISBP); m=13/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score= 706.4; ----GGGACCAC- ; cor=0.757; Ncor=0.550; logoDP=5.875; NsEucl=0.866; NSW=0.856; rcor=733; rNcor=535; rlogoDP=241; rNsEucl=999; rNSW=1024; rank_mean=706.400; match_rank= a 0 0 0 0 11 0 0 83 0 0 100 0 0 c 0 0 0 0 0 0 0 17 100 100 0 100 0 g 0 0 0 0 78 100 100 0 0 0 0 0 0 t 0 0 0 0 11 0 0 0 0 0 0 0 0

TCP5_M1650_1.02_CISBP_shift4 (TCP5:M1650_1.02:CISBP) 0.756 0.550 6.169 0.863 0.849 739 538 220 1016 1042 711.000
; assembly_3 versus TCP5_M1650_1.02_CISBP (TCP5:M1650_1.02:CISBP); m=14/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score= 711; ----GGGACCAY- ; cor=0.756; Ncor=0.550; logoDP=6.169; NsEucl=0.863; NSW=0.849; rcor=739; rNcor=538; rlogoDP=220; rNsEucl=1016; rNSW=1042; rank_mean=711.000; match_rank= a 0 0 0 0 0 0 0 100 0 0 100 0 0 c 0 0 0 0 1 0 0 0 100 100 0 74 0 g 0 0 0 0 99 100 100 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 26 0

TCP5_MA1067.1_JASPAR_shift4 (TCP5:MA1067.1:JASPAR) 0.753 0.548 5.948 0.863 0.849 754 542 236 1015 1040 717.400
; assembly_3 versus TCP5_MA1067.1_JASPAR (TCP5:MA1067.1:JASPAR); m=15/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score= 717.4; ----GGGACCAY- ; cor=0.753; Ncor=0.548; logoDP=5.948; NsEucl=0.863; NSW=0.849; rcor=754; rNcor=542; rlogoDP=236; rNsEucl=1015; rNSW=1040; rank_mean=717.400; match_rank= a 0 0 0 0 2 2 2 995 2 2 995 2 0 c 0 0 0 0 2 2 2 2 995 995 2 745 0 g 0 0 0 0 993 995 995 2 2 2 2 2 0 t 0 0 0 0 2 2 2 2 2 2 2 250 0

TCP17.ampDAP_M0766_AthalianaCistrome_shift1 (TCP17.ampDAP:M0766:AthalianaCistrome) 0.711 0.592 5.733 0.877 0.849 1018 373 262 909 1041 720.600
; assembly_3 versus TCP17.ampDAP_M0766_AthalianaCistrome (TCP17.ampDAP:M0766:AthalianaCistrome); m=16/34; ncol2=11; w=-1; offset=-1; strand=D; shift=1; score= 720.6; -gTGGGGACCAC- ; cor=0.711; Ncor=0.592; logoDP=5.733; NsEucl=0.877; NSW=0.849; rcor=1018; rNcor=373; rlogoDP=262; rNsEucl=909; rNSW=1041; rank_mean=720.600; match_rank= a 0 16 7 6 2 1 1 79 0 0 81 5 0 c 0 9 6 3 0 0 0 3 83 83 2 66 0 g 0 52 5 58 80 81 82 0 0 0 0 6 0 t 0 6 65 16 1 1 0 1 0 0 0 6 0

TCP16.ampDAP_M0753_AthalianaCistrome_rc_shift1 (TCP16.ampDAP:M0753:AthalianaCistrome_rc) 0.727 0.606 1.267 0.890 0.880 898 321 809 768 841 727.400
; assembly_3 versus TCP16.ampDAP_M0753_AthalianaCistrome_rc (TCP16.ampDAP:M0753:AthalianaCistrome_rc); m=17/34; ncol2=11; w=-1; offset=-1; strand=R; shift=1; score= 727.4; -wkGTGGaCCyr- ; cor=0.727; Ncor=0.606; logoDP=1.267; NsEucl=0.890; NSW=0.880; rcor=898; rNcor=321; rlogoDP=809; rNsEucl=768; rNSW=841; rank_mean=727.400; match_rank= a 0 160 89 11 0 2 0 307 3 0 38 240 0 c 0 92 24 1 4 2 0 39 546 545 321 69 0 g 0 88 242 539 0 547 551 82 2 0 9 161 0 t 0 211 196 0 547 0 0 123 0 6 183 81 0

TCP24_MA1286.2_JASPAR_shift4 (TCP24:MA1286.2:JASPAR) 0.736 0.535 5.622 0.859 0.841 851 586 272 1029 1056 758.800
; assembly_3 versus TCP24_MA1286.2_JASPAR (TCP24:MA1286.2:JASPAR); m=18/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score= 758.8; ----GGGACCAC- ; cor=0.736; Ncor=0.535; logoDP=5.622; NsEucl=0.859; NSW=0.841; rcor=851; rNcor=586; rlogoDP=272; rNsEucl=1029; rNSW=1056; rank_mean=758.800; match_rank= a 0 0 0 0 12 0 0 527 0 0 567 16 0 c 0 0 0 0 11 0 0 24 594 594 0 560 0 g 0 0 0 0 553 593 594 26 0 0 27 9 0 t 0 0 0 0 18 1 0 17 0 0 0 9 0

ARALYDRAFT_897773_MA1054.2_JASPAR_shift3 (ARALYDRAFT_897773:MA1054.2:JASPAR) 0.709 0.580 4.280 0.877 0.863 1030 425 474 920 988 767.400
; assembly_3 versus ARALYDRAFT_897773_MA1054.2_JASPAR (ARALYDRAFT_897773:MA1054.2:JASPAR); m=19/34; ncol2=9; w=0; offset=1; strand=D; shift=3; score= 767.4; ---kGGGACCAC- ; cor=0.709; Ncor=0.580; logoDP=4.280; NsEucl=0.877; NSW=0.863; rcor=1030; rNcor=425; rlogoDP=474; rNsEucl=920; rNSW=988; rank_mean=767.400; match_rank= a 0 0 0 27 36 17 40 756 2 1 862 20 0 c 0 0 0 79 4 7 125 215 949 995 2 907 0 g 0 0 0 491 877 957 826 7 47 2 132 6 0 t 0 0 0 402 83 19 9 22 2 1 4 67 0

Probable_6j4f_F_3D-footprint_rc_shift2 (Probable:6j4f_F:3D-footprint_rc) 0.721 0.524 1.518 0.885 0.894 939 622 789 837 708 779.000
; assembly_3 versus Probable_6j4f_F_3D-footprint_rc (Probable:6j4f_F:3D-footprint_rc); m=20/34; ncol2=8; w=0; offset=0; strand=R; shift=2; score= 779; --CTTnnACC--- ; cor=0.721; Ncor=0.524; logoDP=1.518; NsEucl=0.885; NSW=0.894; rcor=939; rNcor=622; rlogoDP=789; rNsEucl=837; rNSW=708; rank_mean=779.000; match_rank= a 0 0 11 11 9 24 24 96 0 0 0 0 0 c 0 0 67 9 11 24 24 0 96 96 0 0 0 g 0 0 9 9 9 24 24 0 0 0 0 0 0 t 0 0 9 67 67 24 24 0 0 0 0 0 0

ARALYDRAFT_496250_MA1096.1_JASPAR_shift4 (ARALYDRAFT_496250:MA1096.1:JASPAR) 0.723 0.526 5.953 0.851 0.823 923 613 234 1058 1081 781.800
; assembly_3 versus ARALYDRAFT_496250_MA1096.1_JASPAR (ARALYDRAFT_496250:MA1096.1:JASPAR); m=21/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score= 781.8; ----GGGACCAC- ; cor=0.723; Ncor=0.526; logoDP=5.953; NsEucl=0.851; NSW=0.823; rcor=923; rNcor=613; rlogoDP=234; rNsEucl=1058; rNSW=1081; rank_mean=781.800; match_rank= a 0 0 0 0 3 2 2 994 2 2 994 3 0 c 0 0 0 0 3 2 2 2 994 994 2 990 0 g 0 0 0 0 990 994 994 2 2 2 2 3 0 t 0 0 0 0 3 2 2 2 2 2 2 3 0

TCP3_MA1289.2_JASPAR_shift4 (TCP3:MA1289.2:JASPAR) 0.724 0.526 5.547 0.856 0.833 913 608 284 1044 1073 784.400
; assembly_3 versus TCP3_MA1289.2_JASPAR (TCP3:MA1289.2:JASPAR); m=22/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score= 784.4; ----GGGACCAC- ; cor=0.724; Ncor=0.526; logoDP=5.547; NsEucl=0.856; NSW=0.833; rcor=913; rNcor=608; rlogoDP=284; rNsEucl=1044; rNSW=1073; rank_mean=784.400; match_rank= a 0 0 0 0 2 0 0 503 0 0 544 1 0 c 0 0 0 0 2 0 0 51 582 582 0 561 0 g 0 0 0 0 563 582 582 0 0 0 38 6 0 t 0 0 0 0 15 0 0 28 0 0 0 14 0

TCP16_TCP16_ArabidopsisPBM_rc_shift2 (TCP16:TCP16:ArabidopsisPBM_rc) 0.703 0.639 2.079 0.879 0.854 1074 215 736 897 1026 789.600
; assembly_3 versus TCP16_TCP16_ArabidopsisPBM_rc (TCP16:TCP16:ArabidopsisPBM_rc); m=23/34; ncol2=10; w=0; offset=0; strand=R; shift=2; score= 789.6; --kGTGGACCCR- ; cor=0.703; Ncor=0.639; logoDP=2.079; NsEucl=0.879; NSW=0.854; rcor=1074; rNcor=215; rlogoDP=736; rNsEucl=897; rNSW=1026; rank_mean=789.600; match_rank= a 0 0 12 1 0 0 1 74 1 1 1 70 0 c 0 0 1 1 2 1 0 3 99 99 87 3 0 g 0 0 42 98 0 99 99 11 0 0 0 25 0 t 0 0 45 0 98 0 0 12 0 0 12 2 0

XM_002866361.1_M1655_1.02_CISBP_shift4 (XM_002866361.1:M1655_1.02:CISBP) 0.720 0.523 5.994 0.850 0.820 947 628 231 1061 1083 790.000
; assembly_3 versus XM_002866361.1_M1655_1.02_CISBP (XM_002866361.1:M1655_1.02:CISBP); m=24/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score= 790; ----GGGACCAC- ; cor=0.720; Ncor=0.523; logoDP=5.994; NsEucl=0.850; NSW=0.820; rcor=947; rNcor=628; rlogoDP=231; rNsEucl=1061; rNSW=1083; rank_mean=790.000; match_rank= a 0 0 0 0 0 1 0 99 0 0 100 0 0 c 0 0 0 0 0 0 1 0 99 100 0 100 0 g 0 0 0 0 100 99 99 1 0 0 0 0 0 t 0 0 0 0 0 0 0 0 1 0 0 0 0

NFYA1_LEC1_CA5P16_B73_1_m1_EEAD0493_EEADannot_rc_shift1 (NFYA1_LEC1_CA5P16_B73_1_m1:EEAD0493:EEADannot_rc) 0.706 0.518 0.400 0.901 0.891 1050 651 959 584 742 797.200
; assembly_3 versus NFYA1_LEC1_CA5P16_B73_1_m1_EEAD0493_EEADannot_rc (NFYA1_LEC1_CA5P16_B73_1_m1:EEAD0493:EEADannot_rc); m=25/34; ncol2=15; w=-1; offset=-1; strand=R; shift=1; score= 797.2; -amryyrACCAAT ; cor=0.706; Ncor=0.518; logoDP=0.400; NsEucl=0.901; NSW=0.891; rcor=1050; rNcor=651; rlogoDP=959; rNsEucl=584; rNSW=742; rank_mean=797.200; match_rank= a 0 37 37 35 8 2 31 69 0 0 100 100 0 c 0 24 27 16 29 43 11 10 100 100 0 0 2 g 0 23 13 25 21 23 56 19 0 0 0 0 0 t 0 16 23 24 42 32 2 2 0 0 0 0 98

WRKY62_MA1091.1_JASPAR_rc_shift3 (WRKY62:MA1091.1:JASPAR_rc) 0.737 0.536 1.425 0.867 0.859 839 583 794 981 1004 840.200
; assembly_3 versus WRKY62_MA1091.1_JASPAR_rc (WRKY62:MA1091.1:JASPAR_rc); m=26/34; ncol2=8; w=0; offset=1; strand=R; shift=3; score= 840.2; ---KTTGACYA-- ; cor=0.737; Ncor=0.536; logoDP=1.425; NsEucl=0.867; NSW=0.859; rcor=839; rNcor=583; rlogoDP=794; rNsEucl=981; rNSW=1004; rank_mean=840.200; match_rank= a 0 0 0 1 1 1 1 998 1 1 748 0 0 c 0 0 0 1 1 1 1 1 998 691 1 0 0 g 0 0 0 726 1 1 998 1 1 1 126 0 0 t 0 0 0 273 998 998 1 1 1 308 126 0 0

WRKY62_M1695_1.02_CISBP_rc_shift3 (WRKY62:M1695_1.02:CISBP_rc) 0.736 0.535 1.447 0.867 0.858 845 585 792 984 1008 842.800
; assembly_3 versus WRKY62_M1695_1.02_CISBP_rc (WRKY62:M1695_1.02:CISBP_rc); m=27/34; ncol2=8; w=0; offset=1; strand=R; shift=3; score= 842.8; ---KTTGACYA-- ; cor=0.736; Ncor=0.535; logoDP=1.447; NsEucl=0.867; NSW=0.858; rcor=845; rNcor=585; rlogoDP=792; rNsEucl=984; rNSW=1008; rank_mean=842.800; match_rank= a 0 0 0 0 0 0 0 100 0 0 75 0 0 c 0 0 0 0 0 0 0 0 100 69 0 0 0 g 0 0 0 73 0 0 100 0 0 0 13 0 0 t 0 0 0 27 100 100 0 0 0 31 12 0 0

bHLH64.DAP_M0178_AthalianaCistrome_shift7 (bHLH64.DAP:M0178:AthalianaCistrome) 0.776 0.423 4.182 0.841 0.848 639 992 488 1080 1046 849.000
; assembly_3 versus bHLH64.DAP_M0178_AthalianaCistrome (bHLH64.DAP:M0178:AthalianaCistrome); m=28/34; ncol2=6; w=0; offset=5; strand=D; shift=7; score= 849; -------ACCAGT ; cor=0.776; Ncor=0.423; logoDP=4.182; NsEucl=0.841; NSW=0.848; rcor=639; rNcor=992; rlogoDP=488; rNsEucl=1080; rNSW=1046; rank_mean=849.000; match_rank= a 0 0 0 0 0 0 0 64 0 0 64 0 0 c 0 0 0 0 0 0 0 0 64 64 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 64 0 t 0 0 0 0 0 0 0 0 0 0 0 0 64

WRKY51_MA2368.1_JASPAR_rc_shift4 (WRKY51:MA2368.1:JASPAR_rc) 0.757 0.413 0.759 0.866 0.892 732 1026 897 993 727 875.000
; assembly_3 versus WRKY51_MA2368.1_JASPAR_rc (WRKY51:MA2368.1:JASPAR_rc); m=29/34; ncol2=6; w=0; offset=2; strand=R; shift=4; score= 875; ----TTGACy--- ; cor=0.757; Ncor=0.413; logoDP=0.759; NsEucl=0.866; NSW=0.892; rcor=732; rNcor=1026; rlogoDP=897; rNsEucl=993; rNSW=727; rank_mean=875.000; match_rank= a 0 0 0 0 144 96 27 873 103 62 0 0 0 c 0 0 0 0 93 47 27 0 851 440 0 0 0 g 0 0 0 0 66 145 821 1 1 110 0 0 0 t 0 0 0 0 695 711 124 125 43 386 0 0 0

WRKY60_MA1090.2_JASPAR_rc_shift3 (WRKY60:MA1090.2:JASPAR_rc) 0.748 0.476 1.208 0.859 0.860 777 798 820 1031 1000 885.200
; assembly_3 versus WRKY60_MA1090.2_JASPAR_rc (WRKY60:MA1090.2:JASPAR_rc); m=30/34; ncol2=7; w=0; offset=1; strand=R; shift=3; score= 885.2; ---kTTGACC--- ; cor=0.748; Ncor=0.476; logoDP=1.208; NsEucl=0.859; NSW=0.860; rcor=777; rNcor=798; rlogoDP=820; rNsEucl=1031; rNSW=1000; rank_mean=885.200; match_rank= a 0 0 0 67 0 0 0 1000 0 22 0 0 0 c 0 0 0 67 0 0 0 0 1000 820 0 0 0 g 0 0 0 608 0 0 1000 0 0 22 0 0 0 t 0 0 0 258 1000 1000 0 0 0 136 0 0 0

WRKY2_MA1078.2_JASPAR_rc_shift3 (WRKY2:MA1078.2:JASPAR_rc) 0.733 0.467 0.974 0.862 0.868 866 836 861 1018 953 906.800
; assembly_3 versus WRKY2_MA1078.2_JASPAR_rc (WRKY2:MA1078.2:JASPAR_rc); m=31/34; ncol2=7; w=0; offset=1; strand=R; shift=3; score= 906.8; ---kTTGACY--- ; cor=0.733; Ncor=0.467; logoDP=0.974; NsEucl=0.862; NSW=0.868; rcor=866; rNcor=836; rlogoDP=861; rNsEucl=1018; rNSW=953; rank_mean=906.800; match_rank= a 0 0 0 129 31 0 0 1000 0 0 0 0 0 c 0 0 0 72 163 19 0 0 1000 713 0 0 0 g 0 0 0 528 0 19 1000 0 0 11 0 0 0 t 0 0 0 271 806 961 0 0 0 277 0 0 0

WRKY63_MA1092.2_JASPAR_rc_shift4 (WRKY63:MA1092.2:JASPAR_rc) 0.775 0.423 1.202 0.847 0.859 645 993 821 1071 1005 907.000
; assembly_3 versus WRKY63_MA1092.2_JASPAR_rc (WRKY63:MA1092.2:JASPAR_rc); m=32/34; ncol2=6; w=0; offset=2; strand=R; shift=4; score= 907; ----TTGACC--- ; cor=0.775; Ncor=0.423; logoDP=1.202; NsEucl=0.847; NSW=0.859; rcor=645; rNcor=993; rlogoDP=821; rNsEucl=1071; rNSW=1005; rank_mean=907.000; match_rank= a 0 0 0 0 19 0 0 999 0 0 0 0 0 c 0 0 0 0 0 0 0 0 999 843 0 0 0 g 0 0 0 0 0 0 999 0 0 0 0 0 0 t 0 0 0 0 981 999 0 0 0 157 0 0 0

MYB93_MA2025.2_JASPAR_shift6 (MYB93:MA2025.2:JASPAR) 0.715 0.417 2.936 0.861 0.864 977 1012 650 1025 978 928.400
; assembly_3 versus MYB93_MA2025.2_JASPAR (MYB93:MA2025.2:JASPAR); m=33/34; ncol2=8; w=0; offset=4; strand=D; shift=6; score= 928.4; ------tACCAAA ; cor=0.715; Ncor=0.417; logoDP=2.936; NsEucl=0.861; NSW=0.864; rcor=977; rNcor=1012; rlogoDP=650; rNsEucl=1025; rNSW=978; rank_mean=928.400; match_rank= a 0 0 0 0 0 0 111 516 12 7 400 516 483 c 0 0 0 0 0 0 107 4 511 519 11 2 32 g 0 0 0 0 0 0 32 8 4 0 17 2 7 t 0 0 0 0 0 0 283 5 6 7 105 13 11

WRKY18_MA1077.2_JASPAR_rc_shift4 (WRKY18:MA1077.2:JASPAR_rc) 0.738 0.403 1.137 0.841 0.848 826 1072 830 1081 1047 971.200
; assembly_3 versus WRKY18_MA1077.2_JASPAR_rc (WRKY18:MA1077.2:JASPAR_rc); m=34/34; ncol2=6; w=0; offset=2; strand=R; shift=4; score= 971.2; ----TTGACy--- ; cor=0.738; Ncor=0.403; logoDP=1.137; NsEucl=0.841; NSW=0.848; rcor=826; rNcor=1072; rlogoDP=830; rNsEucl=1081; rNSW=1047; rank_mean=971.200; match_rank= a 0 0 0 0 16 5 2 997 11 8 0 0 0 c 0 0 0 0 11 2 0 2 988 585 0 0 0 g 0 0 0 0 10 8 997 0 1 16 0 0 0 t 0 0 0 0 964 985 1 0 1 392 0 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	Aligned matrices
assembly_3_shift2 (assembly_3)												; assembly_3; m=0 (reference); ncol1=11; shift=2; ncol=13; --wwTGGACCAww ; Alignment reference a 0 0 586 566 72 88 140 1462 97 122 1670 726 668 c 0 0 272 228 35 46 43 100 1530 1562 43 287 305 g 0 0 331 320 66 1520 1555 100 62 38 41 236 287 t 0 0 609 684 1625 144 60 136 109 76 44 549 538
Zm00001d038683_MA1828.1_JASPAR_rc_shift2 (Zm00001d038683:MA1828.1:JASPAR_rc)	0.876	0.803	2.066	0.934	0.953	164	21	737	106	118	229.200	; assembly_3 versus Zm00001d038683_MA1828.1_JASPAR_rc (Zm00001d038683:MA1828.1:JASPAR_rc); m=1/34; ncol2=12; w=0; offset=0; strand=R; shift=2; score= 229.2; --sstGGACCACs ; cor=0.876; Ncor=0.803; logoDP=2.066; NsEucl=0.934; NSW=0.953; rcor=164; rNcor=21; rlogoDP=737; rNsEucl=106; rNSW=118; rank_mean=229.200; match_rank= a 0 0 355 372 221 8 4 1462 9 15 1664 58 385 c 0 0 654 550 189 18 28 111 1768 1727 50 1406 521 g 0 0 492 569 265 1746 1755 85 9 42 65 197 540 t 0 0 295 305 1121 24 9 138 10 12 17 135 350
Zm00001d038683_MA1828.2_JASPAR_rc_shift4 (Zm00001d038683:MA1828.2:JASPAR_rc)	0.909	0.661	2.065	0.923	0.952	96	171	738	190	121	263.200	; assembly_3 versus Zm00001d038683_MA1828.2_JASPAR_rc (Zm00001d038683:MA1828.2:JASPAR_rc); m=2/34; ncol2=8; w=0; offset=2; strand=R; shift=4; score= 263.2; ----tGGACCAC- ; cor=0.909; Ncor=0.661; logoDP=2.065; NsEucl=0.923; NSW=0.952; rcor=96; rNcor=171; rlogoDP=738; rNsEucl=190; rNSW=121; rank_mean=263.200; match_rank= a 0 0 0 0 221 8 4 1462 9 15 1664 58 0 c 0 0 0 0 189 18 28 111 1768 1727 50 1406 0 g 0 0 0 0 265 1746 1755 85 9 42 65 197 0 t 0 0 0 0 1121 24 9 138 10 12 17 135 0
TCP3_M1645_1.02_CISBP_shift3 (TCP3:M1645_1.02:CISBP)	0.797	0.725	3.501	0.915	0.928	511	64	580	292	318	353.000	; assembly_3 versus TCP3_M1645_1.02_CISBP (TCP3:M1645_1.02:CISBP); m=3/34; ncol2=10; w=0; offset=1; strand=D; shift=3; score= 353; ---kgGGaCCAch ; cor=0.797; Ncor=0.725; logoDP=3.501; NsEucl=0.915; NSW=0.928; rcor=511; rNcor=64; rlogoDP=580; rNsEucl=292; rNSW=318; rank_mean=353.000; match_rank= a 0 0 0 17 17 3 3 62 2 3 80 8 28 c 0 0 0 24 5 2 12 24 96 97 7 67 30 g 0 0 0 31 58 91 80 3 2 0 11 11 16 t 0 0 0 28 20 4 5 11 0 0 2 14 26
LjT20A21.20.nc_M1663_1.02_CISBP_shift4 (LjT20A21.20.nc:M1663_1.02:CISBP)	0.832	0.605	5.529	0.893	0.909	341	325	289	719	535	441.800	; assembly_3 versus LjT20A21.20.nc_M1663_1.02_CISBP (LjT20A21.20.nc:M1663_1.02:CISBP); m=4/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score= 441.8; ----GGGACCAy- ; cor=0.832; Ncor=0.605; logoDP=5.529; NsEucl=0.893; NSW=0.909; rcor=341; rNcor=325; rlogoDP=289; rNsEucl=719; rNSW=535; rank_mean=441.800; match_rank= a 0 0 0 0 5 0 0 93 0 0 88 6 0 c 0 0 0 0 0 0 0 7 100 100 4 59 0 g 0 0 0 0 75 100 100 0 0 0 8 6 0 t 0 0 0 0 20 0 0 0 0 0 0 29 0
TCP3.ampDAP_M0750_AthalianaCistrome_shift1 (TCP3.ampDAP:M0750:AthalianaCistrome)	0.737	0.676	5.882	0.895	0.879	836	140	240	687	847	550.000	; assembly_3 versus TCP3.ampDAP_M0750_AthalianaCistrome (TCP3.ampDAP:M0750:AthalianaCistrome); m=5/34; ncol2=12; w=-1; offset=-1; strand=D; shift=1; score= 550; -dtkGGGACCACh ; cor=0.737; Ncor=0.676; logoDP=5.882; NsEucl=0.895; NSW=0.879; rcor=836; rNcor=140; rlogoDP=240; rNsEucl=687; rNSW=847; rank_mean=550.000; match_rank= a 0 168 138 80 5 0 0 543 0 0 584 11 215 c 0 72 106 89 0 0 0 34 592 592 1 553 161 g 0 204 69 197 563 592 592 0 0 0 7 9 47 t 0 148 279 226 24 0 0 15 0 0 0 19 169
PTF1.ampDAP_M0760_AthalianaCistrome_rc_shift1 (PTF1.ampDAP:M0760:AthalianaCistrome_rc)	0.748	0.633	5.181	0.899	0.887	782	231	348	620	778	551.800	; assembly_3 versus PTF1.ampDAP_M0760_AthalianaCistrome_rc (PTF1.ampDAP:M0760:AthalianaCistrome_rc); m=6/34; ncol2=13; w=-1; offset=-1; strand=R; shift=1; score= 551.8; -ktkGGGACCACw ; cor=0.748; Ncor=0.633; logoDP=5.181; NsEucl=0.899; NSW=0.887; rcor=782; rNcor=231; rlogoDP=348; rNsEucl=620; rNSW=778; rank_mean=551.800; match_rank= a 0 120 100 65 55 0 0 464 0 1 514 15 240 c 0 67 66 89 0 0 0 40 527 526 1 489 94 g 0 204 82 194 445 527 527 0 0 0 10 7 27 t 0 136 279 179 27 0 0 23 0 0 2 16 166
LEAFY_EEAD0005_EEADannot_rc_shift0 (LEAFY:EEAD0005:EEADannot_rc)	0.796	0.461	0.567	0.920	0.929	519	851	931	232	304	567.400	; assembly_3 versus LEAFY_EEAD0005_EEADannot_rc (LEAFY:EEAD0005:EEADannot_rc); m=7/34; ncol2=19; w=-2; offset=-2; strand=R; shift=0; score= 567.4; wwtwTkGwCCrtT ; cor=0.796; Ncor=0.461; logoDP=0.567; NsEucl=0.920; NSW=0.929; rcor=519; rNcor=851; rlogoDP=931; rNsEucl=232; rNSW=304; rank_mean=567.400; match_rank= a 111 96 50 144 27 21 35 208 7 7 166 62 15 c 65 66 62 5 24 3 2 15 353 333 6 43 24 g 80 65 39 13 16 223 327 6 2 2 151 18 8 t 116 145 221 210 305 125 8 143 10 30 49 249 325
TCP24_MA1286.1_JASPAR_shift1 (TCP24:MA1286.1:JASPAR)	0.729	0.668	5.628	0.895	0.879	886	155	271	694	851	571.400	; assembly_3 versus TCP24_MA1286.1_JASPAR (TCP24:MA1286.1:JASPAR); m=8/34; ncol2=12; w=-1; offset=-1; strand=D; shift=1; score= 571.4; -rtkGGGACCACh ; cor=0.729; Ncor=0.668; logoDP=5.628; NsEucl=0.895; NSW=0.879; rcor=886; rNcor=155; rlogoDP=271; rNsEucl=694; rNSW=851; rank_mean=571.400; match_rank= a 0 153 113 74 12 0 0 527 0 0 567 16 195 c 0 81 108 100 11 0 0 24 594 594 0 560 192 g 0 214 94 196 553 593 594 26 0 0 27 9 40 t 0 146 279 224 18 1 0 17 0 0 0 9 167
TCP3_MA1289.1_JASPAR_shift1 (TCP3:MA1289.1:JASPAR)	0.720	0.609	5.555	0.893	0.873	946	309	283	734	913	637.000	; assembly_3 versus TCP3_MA1289.1_JASPAR (TCP3:MA1289.1:JASPAR); m=9/34; ncol2=13; w=-1; offset=-1; strand=D; shift=1; score= 637; -rtkGGGACCACh ; cor=0.720; Ncor=0.609; logoDP=5.555; NsEucl=0.893; NSW=0.873; rcor=946; rNcor=309; rlogoDP=283; rNsEucl=734; rNSW=913; rank_mean=637.000; match_rank= a 0 165 122 58 2 0 0 503 0 0 544 1 215 c 0 69 95 89 2 0 0 51 582 582 0 561 154 g 0 209 77 185 563 582 582 0 0 0 38 6 51 t 0 139 288 250 15 0 0 28 0 0 0 14 162
ARALYDRAFT_897773_MA1054.1_JASPAR_shift2 (ARALYDRAFT_897773:MA1054.1:JASPAR)	0.703	0.639	4.282	0.887	0.873	1075	219	472	814	917	699.400	; assembly_3 versus ARALYDRAFT_897773_MA1054.1_JASPAR (ARALYDRAFT_897773:MA1054.1:JASPAR); m=10/34; ncol2=10; w=0; offset=0; strand=D; shift=2; score= 699.4; --ykGGGACCAC- ; cor=0.703; Ncor=0.639; logoDP=4.282; NsEucl=0.887; NSW=0.873; rcor=1075; rNcor=219; rlogoDP=472; rNsEucl=814; rNSW=917; rank_mean=699.400; match_rank= a 0 0 92 27 36 17 40 756 2 1 862 20 0 c 0 0 278 79 4 7 125 215 949 995 2 907 0 g 0 0 167 491 877 957 826 7 47 2 132 6 0 t 0 0 463 402 83 19 9 22 2 1 4 67 0
scaffold_301743.1_M1659_1.02_CISBP_shift2 (scaffold_301743.1:M1659_1.02:CISBP)	0.703	0.639	4.349	0.887	0.872	1076	220	465	816	921	699.600	; assembly_3 versus scaffold_301743.1_M1659_1.02_CISBP (scaffold_301743.1:M1659_1.02:CISBP); m=11/34; ncol2=10; w=0; offset=0; strand=D; shift=2; score= 699.6; --ykGGGACCAC- ; cor=0.703; Ncor=0.639; logoDP=4.349; NsEucl=0.887; NSW=0.872; rcor=1076; rNcor=220; rlogoDP=465; rNsEucl=816; rNSW=921; rank_mean=699.600; match_rank= a 0 0 9 3 4 2 4 76 0 0 87 1 0 c 0 0 28 8 0 1 12 21 95 100 0 91 0 g 0 0 17 49 88 95 83 1 5 0 13 1 0 t 0 0 46 40 8 2 1 2 0 0 0 7 0
TCP4_MA1035.1_JASPAR_shift4 (TCP4:MA1035.1:JASPAR)	0.758	0.551	5.763	0.866	0.857	727	533	257	991	1016	704.800	; assembly_3 versus TCP4_MA1035.1_JASPAR (TCP4:MA1035.1:JASPAR); m=12/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score= 704.8; ----GGGACCAC- ; cor=0.758; Ncor=0.551; logoDP=5.763; NsEucl=0.866; NSW=0.857; rcor=727; rNcor=533; rlogoDP=257; rNsEucl=991; rNSW=1016; rank_mean=704.800; match_rank= a 0 0 0 0 112 1 1 831 1 1 997 1 0 c 0 0 0 0 1 1 1 167 998 998 1 996 0 g 0 0 0 0 775 998 998 1 1 1 1 1 0 t 0 0 0 0 112 1 1 1 1 1 1 1 0
MEE35_M1646_1.02_CISBP_shift4 (MEE35:M1646_1.02:CISBP)	0.757	0.550	5.875	0.866	0.856	733	535	241	999	1024	706.400	; assembly_3 versus MEE35_M1646_1.02_CISBP (MEE35:M1646_1.02:CISBP); m=13/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score= 706.4; ----GGGACCAC- ; cor=0.757; Ncor=0.550; logoDP=5.875; NsEucl=0.866; NSW=0.856; rcor=733; rNcor=535; rlogoDP=241; rNsEucl=999; rNSW=1024; rank_mean=706.400; match_rank= a 0 0 0 0 11 0 0 83 0 0 100 0 0 c 0 0 0 0 0 0 0 17 100 100 0 100 0 g 0 0 0 0 78 100 100 0 0 0 0 0 0 t 0 0 0 0 11 0 0 0 0 0 0 0 0
TCP5_M1650_1.02_CISBP_shift4 (TCP5:M1650_1.02:CISBP)	0.756	0.550	6.169	0.863	0.849	739	538	220	1016	1042	711.000	; assembly_3 versus TCP5_M1650_1.02_CISBP (TCP5:M1650_1.02:CISBP); m=14/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score= 711; ----GGGACCAY- ; cor=0.756; Ncor=0.550; logoDP=6.169; NsEucl=0.863; NSW=0.849; rcor=739; rNcor=538; rlogoDP=220; rNsEucl=1016; rNSW=1042; rank_mean=711.000; match_rank= a 0 0 0 0 0 0 0 100 0 0 100 0 0 c 0 0 0 0 1 0 0 0 100 100 0 74 0 g 0 0 0 0 99 100 100 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 26 0
TCP5_MA1067.1_JASPAR_shift4 (TCP5:MA1067.1:JASPAR)	0.753	0.548	5.948	0.863	0.849	754	542	236	1015	1040	717.400	; assembly_3 versus TCP5_MA1067.1_JASPAR (TCP5:MA1067.1:JASPAR); m=15/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score= 717.4; ----GGGACCAY- ; cor=0.753; Ncor=0.548; logoDP=5.948; NsEucl=0.863; NSW=0.849; rcor=754; rNcor=542; rlogoDP=236; rNsEucl=1015; rNSW=1040; rank_mean=717.400; match_rank= a 0 0 0 0 2 2 2 995 2 2 995 2 0 c 0 0 0 0 2 2 2 2 995 995 2 745 0 g 0 0 0 0 993 995 995 2 2 2 2 2 0 t 0 0 0 0 2 2 2 2 2 2 2 250 0
TCP17.ampDAP_M0766_AthalianaCistrome_shift1 (TCP17.ampDAP:M0766:AthalianaCistrome)	0.711	0.592	5.733	0.877	0.849	1018	373	262	909	1041	720.600	; assembly_3 versus TCP17.ampDAP_M0766_AthalianaCistrome (TCP17.ampDAP:M0766:AthalianaCistrome); m=16/34; ncol2=11; w=-1; offset=-1; strand=D; shift=1; score= 720.6; -gTGGGGACCAC- ; cor=0.711; Ncor=0.592; logoDP=5.733; NsEucl=0.877; NSW=0.849; rcor=1018; rNcor=373; rlogoDP=262; rNsEucl=909; rNSW=1041; rank_mean=720.600; match_rank= a 0 16 7 6 2 1 1 79 0 0 81 5 0 c 0 9 6 3 0 0 0 3 83 83 2 66 0 g 0 52 5 58 80 81 82 0 0 0 0 6 0 t 0 6 65 16 1 1 0 1 0 0 0 6 0
TCP16.ampDAP_M0753_AthalianaCistrome_rc_shift1 (TCP16.ampDAP:M0753:AthalianaCistrome_rc)	0.727	0.606	1.267	0.890	0.880	898	321	809	768	841	727.400	; assembly_3 versus TCP16.ampDAP_M0753_AthalianaCistrome_rc (TCP16.ampDAP:M0753:AthalianaCistrome_rc); m=17/34; ncol2=11; w=-1; offset=-1; strand=R; shift=1; score= 727.4; -wkGTGGaCCyr- ; cor=0.727; Ncor=0.606; logoDP=1.267; NsEucl=0.890; NSW=0.880; rcor=898; rNcor=321; rlogoDP=809; rNsEucl=768; rNSW=841; rank_mean=727.400; match_rank= a 0 160 89 11 0 2 0 307 3 0 38 240 0 c 0 92 24 1 4 2 0 39 546 545 321 69 0 g 0 88 242 539 0 547 551 82 2 0 9 161 0 t 0 211 196 0 547 0 0 123 0 6 183 81 0
TCP24_MA1286.2_JASPAR_shift4 (TCP24:MA1286.2:JASPAR)	0.736	0.535	5.622	0.859	0.841	851	586	272	1029	1056	758.800	; assembly_3 versus TCP24_MA1286.2_JASPAR (TCP24:MA1286.2:JASPAR); m=18/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score= 758.8; ----GGGACCAC- ; cor=0.736; Ncor=0.535; logoDP=5.622; NsEucl=0.859; NSW=0.841; rcor=851; rNcor=586; rlogoDP=272; rNsEucl=1029; rNSW=1056; rank_mean=758.800; match_rank= a 0 0 0 0 12 0 0 527 0 0 567 16 0 c 0 0 0 0 11 0 0 24 594 594 0 560 0 g 0 0 0 0 553 593 594 26 0 0 27 9 0 t 0 0 0 0 18 1 0 17 0 0 0 9 0
ARALYDRAFT_897773_MA1054.2_JASPAR_shift3 (ARALYDRAFT_897773:MA1054.2:JASPAR)	0.709	0.580	4.280	0.877	0.863	1030	425	474	920	988	767.400	; assembly_3 versus ARALYDRAFT_897773_MA1054.2_JASPAR (ARALYDRAFT_897773:MA1054.2:JASPAR); m=19/34; ncol2=9; w=0; offset=1; strand=D; shift=3; score= 767.4; ---kGGGACCAC- ; cor=0.709; Ncor=0.580; logoDP=4.280; NsEucl=0.877; NSW=0.863; rcor=1030; rNcor=425; rlogoDP=474; rNsEucl=920; rNSW=988; rank_mean=767.400; match_rank= a 0 0 0 27 36 17 40 756 2 1 862 20 0 c 0 0 0 79 4 7 125 215 949 995 2 907 0 g 0 0 0 491 877 957 826 7 47 2 132 6 0 t 0 0 0 402 83 19 9 22 2 1 4 67 0
Probable_6j4f_F_3D-footprint_rc_shift2 (Probable:6j4f_F:3D-footprint_rc)	0.721	0.524	1.518	0.885	0.894	939	622	789	837	708	779.000	; assembly_3 versus Probable_6j4f_F_3D-footprint_rc (Probable:6j4f_F:3D-footprint_rc); m=20/34; ncol2=8; w=0; offset=0; strand=R; shift=2; score= 779; --CTTnnACC--- ; cor=0.721; Ncor=0.524; logoDP=1.518; NsEucl=0.885; NSW=0.894; rcor=939; rNcor=622; rlogoDP=789; rNsEucl=837; rNSW=708; rank_mean=779.000; match_rank= a 0 0 11 11 9 24 24 96 0 0 0 0 0 c 0 0 67 9 11 24 24 0 96 96 0 0 0 g 0 0 9 9 9 24 24 0 0 0 0 0 0 t 0 0 9 67 67 24 24 0 0 0 0 0 0
ARALYDRAFT_496250_MA1096.1_JASPAR_shift4 (ARALYDRAFT_496250:MA1096.1:JASPAR)	0.723	0.526	5.953	0.851	0.823	923	613	234	1058	1081	781.800	; assembly_3 versus ARALYDRAFT_496250_MA1096.1_JASPAR (ARALYDRAFT_496250:MA1096.1:JASPAR); m=21/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score= 781.8; ----GGGACCAC- ; cor=0.723; Ncor=0.526; logoDP=5.953; NsEucl=0.851; NSW=0.823; rcor=923; rNcor=613; rlogoDP=234; rNsEucl=1058; rNSW=1081; rank_mean=781.800; match_rank= a 0 0 0 0 3 2 2 994 2 2 994 3 0 c 0 0 0 0 3 2 2 2 994 994 2 990 0 g 0 0 0 0 990 994 994 2 2 2 2 3 0 t 0 0 0 0 3 2 2 2 2 2 2 3 0
TCP3_MA1289.2_JASPAR_shift4 (TCP3:MA1289.2:JASPAR)	0.724	0.526	5.547	0.856	0.833	913	608	284	1044	1073	784.400	; assembly_3 versus TCP3_MA1289.2_JASPAR (TCP3:MA1289.2:JASPAR); m=22/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score= 784.4; ----GGGACCAC- ; cor=0.724; Ncor=0.526; logoDP=5.547; NsEucl=0.856; NSW=0.833; rcor=913; rNcor=608; rlogoDP=284; rNsEucl=1044; rNSW=1073; rank_mean=784.400; match_rank= a 0 0 0 0 2 0 0 503 0 0 544 1 0 c 0 0 0 0 2 0 0 51 582 582 0 561 0 g 0 0 0 0 563 582 582 0 0 0 38 6 0 t 0 0 0 0 15 0 0 28 0 0 0 14 0
TCP16_TCP16_ArabidopsisPBM_rc_shift2 (TCP16:TCP16:ArabidopsisPBM_rc)	0.703	0.639	2.079	0.879	0.854	1074	215	736	897	1026	789.600	; assembly_3 versus TCP16_TCP16_ArabidopsisPBM_rc (TCP16:TCP16:ArabidopsisPBM_rc); m=23/34; ncol2=10; w=0; offset=0; strand=R; shift=2; score= 789.6; --kGTGGACCCR- ; cor=0.703; Ncor=0.639; logoDP=2.079; NsEucl=0.879; NSW=0.854; rcor=1074; rNcor=215; rlogoDP=736; rNsEucl=897; rNSW=1026; rank_mean=789.600; match_rank= a 0 0 12 1 0 0 1 74 1 1 1 70 0 c 0 0 1 1 2 1 0 3 99 99 87 3 0 g 0 0 42 98 0 99 99 11 0 0 0 25 0 t 0 0 45 0 98 0 0 12 0 0 12 2 0
XM_002866361.1_M1655_1.02_CISBP_shift4 (XM_002866361.1:M1655_1.02:CISBP)	0.720	0.523	5.994	0.850	0.820	947	628	231	1061	1083	790.000	; assembly_3 versus XM_002866361.1_M1655_1.02_CISBP (XM_002866361.1:M1655_1.02:CISBP); m=24/34; ncol2=8; w=0; offset=2; strand=D; shift=4; score= 790; ----GGGACCAC- ; cor=0.720; Ncor=0.523; logoDP=5.994; NsEucl=0.850; NSW=0.820; rcor=947; rNcor=628; rlogoDP=231; rNsEucl=1061; rNSW=1083; rank_mean=790.000; match_rank= a 0 0 0 0 0 1 0 99 0 0 100 0 0 c 0 0 0 0 0 0 1 0 99 100 0 100 0 g 0 0 0 0 100 99 99 1 0 0 0 0 0 t 0 0 0 0 0 0 0 0 1 0 0 0 0
NFYA1_LEC1_CA5P16_B73_1_m1_EEAD0493_EEADannot_rc_shift1 (NFYA1_LEC1_CA5P16_B73_1_m1:EEAD0493:EEADannot_rc)	0.706	0.518	0.400	0.901	0.891	1050	651	959	584	742	797.200	; assembly_3 versus NFYA1_LEC1_CA5P16_B73_1_m1_EEAD0493_EEADannot_rc (NFYA1_LEC1_CA5P16_B73_1_m1:EEAD0493:EEADannot_rc); m=25/34; ncol2=15; w=-1; offset=-1; strand=R; shift=1; score= 797.2; -amryyrACCAAT ; cor=0.706; Ncor=0.518; logoDP=0.400; NsEucl=0.901; NSW=0.891; rcor=1050; rNcor=651; rlogoDP=959; rNsEucl=584; rNSW=742; rank_mean=797.200; match_rank= a 0 37 37 35 8 2 31 69 0 0 100 100 0 c 0 24 27 16 29 43 11 10 100 100 0 0 2 g 0 23 13 25 21 23 56 19 0 0 0 0 0 t 0 16 23 24 42 32 2 2 0 0 0 0 98
WRKY62_MA1091.1_JASPAR_rc_shift3 (WRKY62:MA1091.1:JASPAR_rc)	0.737	0.536	1.425	0.867	0.859	839	583	794	981	1004	840.200	; assembly_3 versus WRKY62_MA1091.1_JASPAR_rc (WRKY62:MA1091.1:JASPAR_rc); m=26/34; ncol2=8; w=0; offset=1; strand=R; shift=3; score= 840.2; ---KTTGACYA-- ; cor=0.737; Ncor=0.536; logoDP=1.425; NsEucl=0.867; NSW=0.859; rcor=839; rNcor=583; rlogoDP=794; rNsEucl=981; rNSW=1004; rank_mean=840.200; match_rank= a 0 0 0 1 1 1 1 998 1 1 748 0 0 c 0 0 0 1 1 1 1 1 998 691 1 0 0 g 0 0 0 726 1 1 998 1 1 1 126 0 0 t 0 0 0 273 998 998 1 1 1 308 126 0 0
WRKY62_M1695_1.02_CISBP_rc_shift3 (WRKY62:M1695_1.02:CISBP_rc)	0.736	0.535	1.447	0.867	0.858	845	585	792	984	1008	842.800	; assembly_3 versus WRKY62_M1695_1.02_CISBP_rc (WRKY62:M1695_1.02:CISBP_rc); m=27/34; ncol2=8; w=0; offset=1; strand=R; shift=3; score= 842.8; ---KTTGACYA-- ; cor=0.736; Ncor=0.535; logoDP=1.447; NsEucl=0.867; NSW=0.858; rcor=845; rNcor=585; rlogoDP=792; rNsEucl=984; rNSW=1008; rank_mean=842.800; match_rank= a 0 0 0 0 0 0 0 100 0 0 75 0 0 c 0 0 0 0 0 0 0 0 100 69 0 0 0 g 0 0 0 73 0 0 100 0 0 0 13 0 0 t 0 0 0 27 100 100 0 0 0 31 12 0 0
bHLH64.DAP_M0178_AthalianaCistrome_shift7 (bHLH64.DAP:M0178:AthalianaCistrome)	0.776	0.423	4.182	0.841	0.848	639	992	488	1080	1046	849.000	; assembly_3 versus bHLH64.DAP_M0178_AthalianaCistrome (bHLH64.DAP:M0178:AthalianaCistrome); m=28/34; ncol2=6; w=0; offset=5; strand=D; shift=7; score= 849; -------ACCAGT ; cor=0.776; Ncor=0.423; logoDP=4.182; NsEucl=0.841; NSW=0.848; rcor=639; rNcor=992; rlogoDP=488; rNsEucl=1080; rNSW=1046; rank_mean=849.000; match_rank= a 0 0 0 0 0 0 0 64 0 0 64 0 0 c 0 0 0 0 0 0 0 0 64 64 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0 64 0 t 0 0 0 0 0 0 0 0 0 0 0 0 64
WRKY51_MA2368.1_JASPAR_rc_shift4 (WRKY51:MA2368.1:JASPAR_rc)	0.757	0.413	0.759	0.866	0.892	732	1026	897	993	727	875.000	; assembly_3 versus WRKY51_MA2368.1_JASPAR_rc (WRKY51:MA2368.1:JASPAR_rc); m=29/34; ncol2=6; w=0; offset=2; strand=R; shift=4; score= 875; ----TTGACy--- ; cor=0.757; Ncor=0.413; logoDP=0.759; NsEucl=0.866; NSW=0.892; rcor=732; rNcor=1026; rlogoDP=897; rNsEucl=993; rNSW=727; rank_mean=875.000; match_rank= a 0 0 0 0 144 96 27 873 103 62 0 0 0 c 0 0 0 0 93 47 27 0 851 440 0 0 0 g 0 0 0 0 66 145 821 1 1 110 0 0 0 t 0 0 0 0 695 711 124 125 43 386 0 0 0
WRKY60_MA1090.2_JASPAR_rc_shift3 (WRKY60:MA1090.2:JASPAR_rc)	0.748	0.476	1.208	0.859	0.860	777	798	820	1031	1000	885.200	; assembly_3 versus WRKY60_MA1090.2_JASPAR_rc (WRKY60:MA1090.2:JASPAR_rc); m=30/34; ncol2=7; w=0; offset=1; strand=R; shift=3; score= 885.2; ---kTTGACC--- ; cor=0.748; Ncor=0.476; logoDP=1.208; NsEucl=0.859; NSW=0.860; rcor=777; rNcor=798; rlogoDP=820; rNsEucl=1031; rNSW=1000; rank_mean=885.200; match_rank= a 0 0 0 67 0 0 0 1000 0 22 0 0 0 c 0 0 0 67 0 0 0 0 1000 820 0 0 0 g 0 0 0 608 0 0 1000 0 0 22 0 0 0 t 0 0 0 258 1000 1000 0 0 0 136 0 0 0
WRKY2_MA1078.2_JASPAR_rc_shift3 (WRKY2:MA1078.2:JASPAR_rc)	0.733	0.467	0.974	0.862	0.868	866	836	861	1018	953	906.800	; assembly_3 versus WRKY2_MA1078.2_JASPAR_rc (WRKY2:MA1078.2:JASPAR_rc); m=31/34; ncol2=7; w=0; offset=1; strand=R; shift=3; score= 906.8; ---kTTGACY--- ; cor=0.733; Ncor=0.467; logoDP=0.974; NsEucl=0.862; NSW=0.868; rcor=866; rNcor=836; rlogoDP=861; rNsEucl=1018; rNSW=953; rank_mean=906.800; match_rank= a 0 0 0 129 31 0 0 1000 0 0 0 0 0 c 0 0 0 72 163 19 0 0 1000 713 0 0 0 g 0 0 0 528 0 19 1000 0 0 11 0 0 0 t 0 0 0 271 806 961 0 0 0 277 0 0 0
WRKY63_MA1092.2_JASPAR_rc_shift4 (WRKY63:MA1092.2:JASPAR_rc)	0.775	0.423	1.202	0.847	0.859	645	993	821	1071	1005	907.000	; assembly_3 versus WRKY63_MA1092.2_JASPAR_rc (WRKY63:MA1092.2:JASPAR_rc); m=32/34; ncol2=6; w=0; offset=2; strand=R; shift=4; score= 907; ----TTGACC--- ; cor=0.775; Ncor=0.423; logoDP=1.202; NsEucl=0.847; NSW=0.859; rcor=645; rNcor=993; rlogoDP=821; rNsEucl=1071; rNSW=1005; rank_mean=907.000; match_rank= a 0 0 0 0 19 0 0 999 0 0 0 0 0 c 0 0 0 0 0 0 0 0 999 843 0 0 0 g 0 0 0 0 0 0 999 0 0 0 0 0 0 t 0 0 0 0 981 999 0 0 0 157 0 0 0
MYB93_MA2025.2_JASPAR_shift6 (MYB93:MA2025.2:JASPAR)	0.715	0.417	2.936	0.861	0.864	977	1012	650	1025	978	928.400	; assembly_3 versus MYB93_MA2025.2_JASPAR (MYB93:MA2025.2:JASPAR); m=33/34; ncol2=8; w=0; offset=4; strand=D; shift=6; score= 928.4; ------tACCAAA ; cor=0.715; Ncor=0.417; logoDP=2.936; NsEucl=0.861; NSW=0.864; rcor=977; rNcor=1012; rlogoDP=650; rNsEucl=1025; rNSW=978; rank_mean=928.400; match_rank= a 0 0 0 0 0 0 111 516 12 7 400 516 483 c 0 0 0 0 0 0 107 4 511 519 11 2 32 g 0 0 0 0 0 0 32 8 4 0 17 2 7 t 0 0 0 0 0 0 283 5 6 7 105 13 11
WRKY18_MA1077.2_JASPAR_rc_shift4 (WRKY18:MA1077.2:JASPAR_rc)	0.738	0.403	1.137	0.841	0.848	826	1072	830	1081	1047	971.200	; assembly_3 versus WRKY18_MA1077.2_JASPAR_rc (WRKY18:MA1077.2:JASPAR_rc); m=34/34; ncol2=6; w=0; offset=2; strand=R; shift=4; score= 971.2; ----TTGACy--- ; cor=0.738; Ncor=0.403; logoDP=1.137; NsEucl=0.841; NSW=0.848; rcor=826; rNcor=1072; rlogoDP=830; rNsEucl=1081; rNSW=1047; rank_mean=971.200; match_rank= a 0 0 0 0 16 5 2 997 11 8 0 0 0 c 0 0 0 0 11 2 0 2 988 585 0 0 0 g 0 0 0 0 10 8 997 0 1 16 0 0 0 t 0 0 0 0 964 985 1 0 1 392 0 0 0

One-to-n matrix alignment; reference matrix: assembly_18_shift5 ; 14 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
assembly_18_shift5 (assembly_18)
; assembly_18; m=0 (reference); ncol1=14; shift=5; ncol=19; -----rwrGAAGAAGAgra ; Alignment reference a 0 0 0 0 0 462 569 328 192 1178 1139 147 1170 1139 144 1190 303 554 563 c 0 0 0 0 0 130 140 77 40 22 26 45 44 30 24 31 70 137 192 g 0 0 0 0 0 388 251 757 991 64 80 1059 46 68 1076 26 812 331 257 t 0 0 0 0 0 315 335 133 72 31 50 44 35 58 51 48 110 273 283

ONAC127_UN0429.2_JASPAR_shift6 (ONAC127:UN0429.2:JASPAR) 0.948 0.474 3.913 0.930 0.966 41 810 525 127 71 314.800
; assembly_18 versus ONAC127_UN0429.2_JASPAR (ONAC127:UN0429.2:JASPAR); m=1/13; ncol2=7; w=0; offset=1; strand=D; shift=6; score= 314.8; ------AGGAAGA------ ; cor=0.948; Ncor=0.474; logoDP=3.913; NsEucl=0.930; NSW=0.966; rcor=41; rNcor=810; rlogoDP=525; rNsEucl=127; rNSW=71; rank_mean=314.800; match_rank= a 0 0 0 0 0 0 49 0 1 50 53 1 51 0 0 0 0 0 0 c 0 0 0 0 0 0 0 3 0 0 1 1 0 0 0 0 0 0 0 g 0 0 0 0 0 0 1 46 48 0 1 52 2 0 0 0 0 0 0 t 0 0 0 0 0 0 5 6 6 5 0 1 2 0 0 0 0 0 0

ONAC127_UN0430.1_JASPAR_shift7 (ONAC127:UN0430.1:JASPAR) 0.797 0.683 4.897 0.919 0.922 517 131 406 238 390 336.400
; assembly_18 versus ONAC127_UN0430.1_JASPAR (ONAC127:UN0430.1:JASPAR); m=2/13; ncol2=12; w=0; offset=2; strand=D; shift=7; score= 336.4; -------dgAAGAAAAGgr ; cor=0.797; Ncor=0.683; logoDP=4.897; NsEucl=0.919; NSW=0.922; rcor=517; rNcor=131; rlogoDP=406; rNsEucl=238; rNSW=390; rank_mean=336.400; match_rank= a 0 0 0 0 0 0 0 20 16 65 67 4 57 61 63 58 3 16 25 c 0 0 0 0 0 0 0 8 16 0 0 0 2 5 0 1 7 14 9 g 0 0 0 0 0 0 0 20 22 0 0 62 7 1 5 3 56 30 19 t 0 0 0 0 0 0 0 20 14 3 1 2 2 1 0 6 2 8 15

ONAC127_UN0429.1_JASPAR_shift7 (ONAC127:UN0429.1:JASPAR) 0.765 0.601 4.799 0.908 0.907 696 344 422 426 565 490.600
; assembly_18 versus ONAC127_UN0429.1_JASPAR (ONAC127:UN0429.1:JASPAR); m=3/13; ncol2=11; w=0; offset=2; strand=D; shift=7; score= 490.6; -------rgAGGAAGAyv- ; cor=0.765; Ncor=0.601; logoDP=4.799; NsEucl=0.908; NSW=0.907; rcor=696; rNcor=344; rlogoDP=422; rNsEucl=426; rNSW=565; rank_mean=490.600; match_rank= a 0 0 0 0 0 0 0 21 11 49 0 1 50 53 1 51 12 14 0 c 0 0 0 0 0 0 0 9 10 0 3 0 0 1 1 0 15 15 0 g 0 0 0 0 0 0 0 15 27 1 46 48 0 1 52 2 11 21 0 t 0 0 0 0 0 0 0 10 7 5 6 6 5 0 1 2 17 5 0

ONAC127_UN0430.2_JASPAR_shift9 (ONAC127:UN0430.2:JASPAR) 0.839 0.480 4.884 0.896 0.914 305 781 409 668 487 530.000
; assembly_18 versus ONAC127_UN0430.2_JASPAR (ONAC127:UN0430.2:JASPAR); m=4/13; ncol2=8; w=0; offset=4; strand=D; shift=9; score= 530; ---------AAGAAAAG-- ; cor=0.839; Ncor=0.480; logoDP=4.884; NsEucl=0.896; NSW=0.914; rcor=305; rNcor=781; rlogoDP=409; rNsEucl=668; rNSW=487; rank_mean=530.000; match_rank= a 0 0 0 0 0 0 0 0 0 65 67 4 57 61 63 58 3 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 1 7 0 0 g 0 0 0 0 0 0 0 0 0 0 0 62 7 1 5 3 56 0 0 t 0 0 0 0 0 0 0 0 0 3 1 2 2 1 0 6 2 0 0

ANAC004.DAP_M0664_AthalianaCistrome_rc_shift1 (ANAC004.DAP:M0664:AthalianaCistrome_rc) 0.795 0.442 1.644 0.915 0.927 521 920 775 295 322 566.600
; assembly_18 versus ANAC004.DAP_M0664_AthalianaCistrome_rc (ANAC004.DAP:M0664:AthalianaCistrome_rc); m=5/13; ncol2=14; w=-4; offset=-4; strand=R; shift=1; score= 566.6; -aCTTrywraRsAAG---- ; cor=0.795; Ncor=0.442; logoDP=1.644; NsEucl=0.915; NSW=0.927; rcor=521; rNcor=920; rlogoDP=775; rNsEucl=295; rNSW=322; rank_mean=566.600; match_rank= a 0 369 0 0 0 219 21 220 212 328 427 13 598 598 0 0 0 0 0 c 0 46 598 0 0 19 195 95 55 89 3 220 0 0 0 0 0 0 0 g 0 145 0 0 0 360 57 127 283 102 154 222 0 0 598 0 0 0 0 t 0 38 0 598 598 0 325 156 48 79 14 143 0 0 0 0 0 0 0

NAC073_MA1790.1_JASPAR_rc_shift0 (NAC073:MA1790.1:JASPAR_rc) 0.782 0.412 1.223 0.915 0.927 597 1033 814 299 323 613.200
; assembly_18 versus NAC073_MA1790.1_JASPAR_rc (NAC073:MA1790.1:JASPAR_rc); m=6/13; ncol2=15; w=-5; offset=-5; strand=R; shift=0; score= 613.2; wrCkTrwrgawsAAG---- ; cor=0.782; Ncor=0.412; logoDP=1.223; NsEucl=0.915; NSW=0.927; rcor=597; rNcor=1033; rlogoDP=814; rNsEucl=299; rNSW=323; rank_mean=613.200; match_rank= a 524 291 95.477 0 6.7 275 504 370 199.33 391.96 538 25.126 992 796 11.725 0 0 0 0 c 3.35 53.601 838 0 0 119 46.901 126 218 189.28 40.201 388.61 1.675 199.33 0 0 0 0 0 g 221 575 0 558 8.375 586 26.801 260 397 240 102 452 6.7 0 985 0 0 0 0 t 251 80.402 67.002 442 985 20.101 422 245 185.93 179 320 134 0 5.025 3.35 0 0 0 0

SND2.DAP_M0707_AthalianaCistrome_rc_shift0 (SND2.DAP:M0707:AthalianaCistrome_rc) 0.782 0.412 1.223 0.915 0.927 599 1034 813 300 324 614.000
; assembly_18 versus SND2.DAP_M0707_AthalianaCistrome_rc (SND2.DAP:M0707:AthalianaCistrome_rc); m=7/13; ncol2=15; w=-5; offset=-5; strand=R; shift=0; score= 614; wrCkTrwrgawsAAG---- ; cor=0.782; Ncor=0.412; logoDP=1.223; NsEucl=0.915; NSW=0.927; rcor=599; rNcor=1034; rlogoDP=813; rNsEucl=300; rNSW=324; rank_mean=614.000; match_rank= a 313 174 57 0 4 164 301 221 119 234 321 15 592 475 7 0 0 0 0 c 2 32 500 0 0 71 28 75 130 113 24 232 1 119 0 0 0 0 0 g 132 343 0 333 5 350 16 155 237 143 61 270 4 0 588 0 0 0 0 t 150 48 40 264 588 12 252 146 111 107 191 80 0 3 2 0 0 0 0

Zm00001d027846_MA1823.1_JASPAR_shift6 (Zm00001d027846:MA1823.1:JASPAR) 0.708 0.607 4.302 0.904 0.890 1037 316 469 508 757 617.400
; assembly_18 versus Zm00001d027846_MA1823.1_JASPAR (Zm00001d027846:MA1823.1:JASPAR); m=8/13; ncol2=12; w=0; offset=1; strand=D; shift=6; score= 617.4; ------arAAAGAAAAar- ; cor=0.708; Ncor=0.607; logoDP=4.302; NsEucl=0.904; NSW=0.890; rcor=1037; rNcor=316; rlogoDP=469; rNsEucl=508; rNSW=757; rank_mean=617.400; match_rank= a 0 0 0 0 0 0 430 399 818 893 929 23 896 915 914 752 429 424 0 c 0 0 0 0 0 0 159 157 46 17 6 24 29 11 27 53 154 130 0 g 0 0 0 0 0 0 223 264 86 44 30 866 38 28 33 123 233 261 0 t 0 0 0 0 0 0 175 167 37 33 22 74 24 33 13 59 171 172 0

ANAC075.DAP_M0685_AthalianaCistrome_shift0 (ANAC075.DAP:M0685:AthalianaCistrome) 0.767 0.404 2.954 0.912 0.922 684 1069 646 348 389 627.200
; assembly_18 versus ANAC075.DAP_M0685_AthalianaCistrome (ANAC075.DAP:M0685:AthalianaCistrome); m=9/13; ncol2=15; w=-5; offset=-5; strand=D; shift=0; score= 627.2; ArCkTgwwgawsAAG---- ; cor=0.767; Ncor=0.404; logoDP=2.954; NsEucl=0.912; NSW=0.922; rcor=684; rNcor=1069; rlogoDP=646; rNsEucl=348; rNSW=389; rank_mean=627.200; match_rank= a 433 165 34 0 0 148 291 196 127 214 327 15 596 456 0 0 0 0 0 c 0 0 542 0 0 76 52 97 134 117 9 253 0 143 0 0 0 0 0 g 101 369 0 363 0 369 6 136 255 139 63 299 3 0 599 0 0 0 0 t 65 65 23 236 599 6 250 170 83 129 200 32 0 0 0 0 0 0 0

TGA5_2_EEAD0137_EEADannot_shift1 (TGA5_2:EEAD0137:EEADannot) 0.723 0.442 3.243 0.903 0.896 921 921 617 546 690 739.000
; assembly_18 versus TGA5_2_EEAD0137_EEADannot (TGA5_2:EEAD0137:EEADannot); m=10/13; ncol2=15; w=-4; offset=-4; strand=D; shift=1; score= 739; -tGrwGawGRwGAwGa--- ; cor=0.723; Ncor=0.442; logoDP=3.243; NsEucl=0.903; NSW=0.896; rcor=921; rNcor=921; rlogoDP=617; rNsEucl=546; rNSW=690; rank_mean=739.000; match_rank= a 0 32 11 110 84 3 137 60 0 146 72 0 148 93 41 118 0 0 0 c 0 47 1 12 18 0 6 47 0 0 29 0 9 30 0 38 0 0 0 g 0 18 188 70 26 201 38 15 204 53 19 204 47 13 163 40 0 0 0 t 0 107 4 12 76 0 23 82 0 5 84 0 0 68 0 8 0 0 0

Zm00001d027846_MA1823.2_JASPAR_shift8 (Zm00001d027846:MA1823.2:JASPAR) 0.728 0.416 4.280 0.866 0.857 891 1013 476 989 1012 876.200
; assembly_18 versus Zm00001d027846_MA1823.2_JASPAR (Zm00001d027846:MA1823.2:JASPAR); m=11/13; ncol2=8; w=0; offset=3; strand=D; shift=8; score= 876.2; --------AAAGAAAA--- ; cor=0.728; Ncor=0.416; logoDP=4.280; NsEucl=0.866; NSW=0.857; rcor=891; rNcor=1013; rlogoDP=476; rNsEucl=989; rNSW=1012; rank_mean=876.200; match_rank= a 0 0 0 0 0 0 0 0 818 893 929 23 896 915 914 752 0 0 0 c 0 0 0 0 0 0 0 0 46 17 6 24 29 11 27 53 0 0 0 g 0 0 0 0 0 0 0 0 86 44 30 866 38 28 33 123 0 0 0 t 0 0 0 0 0 0 0 0 37 33 22 74 24 33 13 59 0 0 0

NTL8_MA1678.3_JASPAR_shift11 (NTL8:MA1678.3:JASPAR) 0.731 0.418 3.522 0.871 0.866 876 1009 577 970 963 879.000
; assembly_18 versus NTL8_MA1678.3_JASPAR (NTL8:MA1678.3:JASPAR); m=12/13; ncol2=8; w=0; offset=6; strand=D; shift=11; score= 879; -----------GAAGAAAC ; cor=0.731; Ncor=0.418; logoDP=3.522; NsEucl=0.871; NSW=0.866; rcor=876; rNcor=1009; rlogoDP=577; rNsEucl=970; rNSW=963; rank_mean=879.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 64 958 912 8 795 957 933 45 c 0 0 0 0 0 0 0 0 0 0 0 171 5 12 6 79 4 10 850 g 0 0 0 0 0 0 0 0 0 0 0 669 10 42 956 35 3 16 40 t 0 0 0 0 0 0 0 0 0 0 0 78 9 16 12 73 18 23 47

TRANSCRIPTION_1qnc_B_3D-footprint_rc_shift9 (TRANSCRIPTION:1qnc_B:3D-footprint_rc) 0.721 0.412 0.400 0.862 0.848 934 1029 960 1019 1044 997.200
; assembly_18 versus TRANSCRIPTION_1qnc_B_3D-footprint_rc (TRANSCRIPTION:1qnc_B:3D-footprint_rc); m=13/13; ncol2=8; w=0; offset=4; strand=R; shift=9; score= 997.2; ---------AATAAmAs-- ; cor=0.721; Ncor=0.412; logoDP=0.400; NsEucl=0.862; NSW=0.848; rcor=934; rNcor=1029; rlogoDP=960; rNsEucl=1019; rNSW=1044; rank_mean=997.200; match_rank= a 0 0 0 0 0 0 0 0 0 96 96 0 96 96 43 96 13 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 27 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 54 0 0 t 0 0 0 0 0 0 0 0 0 0 0 96 0 0 13 0 2 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	Aligned matrices
assembly_18_shift5 (assembly_18)												; assembly_18; m=0 (reference); ncol1=14; shift=5; ncol=19; -----rwrGAAGAAGAgra ; Alignment reference a 0 0 0 0 0 462 569 328 192 1178 1139 147 1170 1139 144 1190 303 554 563 c 0 0 0 0 0 130 140 77 40 22 26 45 44 30 24 31 70 137 192 g 0 0 0 0 0 388 251 757 991 64 80 1059 46 68 1076 26 812 331 257 t 0 0 0 0 0 315 335 133 72 31 50 44 35 58 51 48 110 273 283
ONAC127_UN0429.2_JASPAR_shift6 (ONAC127:UN0429.2:JASPAR)	0.948	0.474	3.913	0.930	0.966	41	810	525	127	71	314.800	; assembly_18 versus ONAC127_UN0429.2_JASPAR (ONAC127:UN0429.2:JASPAR); m=1/13; ncol2=7; w=0; offset=1; strand=D; shift=6; score= 314.8; ------AGGAAGA------ ; cor=0.948; Ncor=0.474; logoDP=3.913; NsEucl=0.930; NSW=0.966; rcor=41; rNcor=810; rlogoDP=525; rNsEucl=127; rNSW=71; rank_mean=314.800; match_rank= a 0 0 0 0 0 0 49 0 1 50 53 1 51 0 0 0 0 0 0 c 0 0 0 0 0 0 0 3 0 0 1 1 0 0 0 0 0 0 0 g 0 0 0 0 0 0 1 46 48 0 1 52 2 0 0 0 0 0 0 t 0 0 0 0 0 0 5 6 6 5 0 1 2 0 0 0 0 0 0
ONAC127_UN0430.1_JASPAR_shift7 (ONAC127:UN0430.1:JASPAR)	0.797	0.683	4.897	0.919	0.922	517	131	406	238	390	336.400	; assembly_18 versus ONAC127_UN0430.1_JASPAR (ONAC127:UN0430.1:JASPAR); m=2/13; ncol2=12; w=0; offset=2; strand=D; shift=7; score= 336.4; -------dgAAGAAAAGgr ; cor=0.797; Ncor=0.683; logoDP=4.897; NsEucl=0.919; NSW=0.922; rcor=517; rNcor=131; rlogoDP=406; rNsEucl=238; rNSW=390; rank_mean=336.400; match_rank= a 0 0 0 0 0 0 0 20 16 65 67 4 57 61 63 58 3 16 25 c 0 0 0 0 0 0 0 8 16 0 0 0 2 5 0 1 7 14 9 g 0 0 0 0 0 0 0 20 22 0 0 62 7 1 5 3 56 30 19 t 0 0 0 0 0 0 0 20 14 3 1 2 2 1 0 6 2 8 15
ONAC127_UN0429.1_JASPAR_shift7 (ONAC127:UN0429.1:JASPAR)	0.765	0.601	4.799	0.908	0.907	696	344	422	426	565	490.600	; assembly_18 versus ONAC127_UN0429.1_JASPAR (ONAC127:UN0429.1:JASPAR); m=3/13; ncol2=11; w=0; offset=2; strand=D; shift=7; score= 490.6; -------rgAGGAAGAyv- ; cor=0.765; Ncor=0.601; logoDP=4.799; NsEucl=0.908; NSW=0.907; rcor=696; rNcor=344; rlogoDP=422; rNsEucl=426; rNSW=565; rank_mean=490.600; match_rank= a 0 0 0 0 0 0 0 21 11 49 0 1 50 53 1 51 12 14 0 c 0 0 0 0 0 0 0 9 10 0 3 0 0 1 1 0 15 15 0 g 0 0 0 0 0 0 0 15 27 1 46 48 0 1 52 2 11 21 0 t 0 0 0 0 0 0 0 10 7 5 6 6 5 0 1 2 17 5 0
ONAC127_UN0430.2_JASPAR_shift9 (ONAC127:UN0430.2:JASPAR)	0.839	0.480	4.884	0.896	0.914	305	781	409	668	487	530.000	; assembly_18 versus ONAC127_UN0430.2_JASPAR (ONAC127:UN0430.2:JASPAR); m=4/13; ncol2=8; w=0; offset=4; strand=D; shift=9; score= 530; ---------AAGAAAAG-- ; cor=0.839; Ncor=0.480; logoDP=4.884; NsEucl=0.896; NSW=0.914; rcor=305; rNcor=781; rlogoDP=409; rNsEucl=668; rNSW=487; rank_mean=530.000; match_rank= a 0 0 0 0 0 0 0 0 0 65 67 4 57 61 63 58 3 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 1 7 0 0 g 0 0 0 0 0 0 0 0 0 0 0 62 7 1 5 3 56 0 0 t 0 0 0 0 0 0 0 0 0 3 1 2 2 1 0 6 2 0 0
ANAC004.DAP_M0664_AthalianaCistrome_rc_shift1 (ANAC004.DAP:M0664:AthalianaCistrome_rc)	0.795	0.442	1.644	0.915	0.927	521	920	775	295	322	566.600	; assembly_18 versus ANAC004.DAP_M0664_AthalianaCistrome_rc (ANAC004.DAP:M0664:AthalianaCistrome_rc); m=5/13; ncol2=14; w=-4; offset=-4; strand=R; shift=1; score= 566.6; -aCTTrywraRsAAG---- ; cor=0.795; Ncor=0.442; logoDP=1.644; NsEucl=0.915; NSW=0.927; rcor=521; rNcor=920; rlogoDP=775; rNsEucl=295; rNSW=322; rank_mean=566.600; match_rank= a 0 369 0 0 0 219 21 220 212 328 427 13 598 598 0 0 0 0 0 c 0 46 598 0 0 19 195 95 55 89 3 220 0 0 0 0 0 0 0 g 0 145 0 0 0 360 57 127 283 102 154 222 0 0 598 0 0 0 0 t 0 38 0 598 598 0 325 156 48 79 14 143 0 0 0 0 0 0 0
NAC073_MA1790.1_JASPAR_rc_shift0 (NAC073:MA1790.1:JASPAR_rc)	0.782	0.412	1.223	0.915	0.927	597	1033	814	299	323	613.200	; assembly_18 versus NAC073_MA1790.1_JASPAR_rc (NAC073:MA1790.1:JASPAR_rc); m=6/13; ncol2=15; w=-5; offset=-5; strand=R; shift=0; score= 613.2; wrCkTrwrgawsAAG---- ; cor=0.782; Ncor=0.412; logoDP=1.223; NsEucl=0.915; NSW=0.927; rcor=597; rNcor=1033; rlogoDP=814; rNsEucl=299; rNSW=323; rank_mean=613.200; match_rank= a 524 291 95.477 0 6.7 275 504 370 199.33 391.96 538 25.126 992 796 11.725 0 0 0 0 c 3.35 53.601 838 0 0 119 46.901 126 218 189.28 40.201 388.61 1.675 199.33 0 0 0 0 0 g 221 575 0 558 8.375 586 26.801 260 397 240 102 452 6.7 0 985 0 0 0 0 t 251 80.402 67.002 442 985 20.101 422 245 185.93 179 320 134 0 5.025 3.35 0 0 0 0
SND2.DAP_M0707_AthalianaCistrome_rc_shift0 (SND2.DAP:M0707:AthalianaCistrome_rc)	0.782	0.412	1.223	0.915	0.927	599	1034	813	300	324	614.000	; assembly_18 versus SND2.DAP_M0707_AthalianaCistrome_rc (SND2.DAP:M0707:AthalianaCistrome_rc); m=7/13; ncol2=15; w=-5; offset=-5; strand=R; shift=0; score= 614; wrCkTrwrgawsAAG---- ; cor=0.782; Ncor=0.412; logoDP=1.223; NsEucl=0.915; NSW=0.927; rcor=599; rNcor=1034; rlogoDP=813; rNsEucl=300; rNSW=324; rank_mean=614.000; match_rank= a 313 174 57 0 4 164 301 221 119 234 321 15 592 475 7 0 0 0 0 c 2 32 500 0 0 71 28 75 130 113 24 232 1 119 0 0 0 0 0 g 132 343 0 333 5 350 16 155 237 143 61 270 4 0 588 0 0 0 0 t 150 48 40 264 588 12 252 146 111 107 191 80 0 3 2 0 0 0 0
Zm00001d027846_MA1823.1_JASPAR_shift6 (Zm00001d027846:MA1823.1:JASPAR)	0.708	0.607	4.302	0.904	0.890	1037	316	469	508	757	617.400	; assembly_18 versus Zm00001d027846_MA1823.1_JASPAR (Zm00001d027846:MA1823.1:JASPAR); m=8/13; ncol2=12; w=0; offset=1; strand=D; shift=6; score= 617.4; ------arAAAGAAAAar- ; cor=0.708; Ncor=0.607; logoDP=4.302; NsEucl=0.904; NSW=0.890; rcor=1037; rNcor=316; rlogoDP=469; rNsEucl=508; rNSW=757; rank_mean=617.400; match_rank= a 0 0 0 0 0 0 430 399 818 893 929 23 896 915 914 752 429 424 0 c 0 0 0 0 0 0 159 157 46 17 6 24 29 11 27 53 154 130 0 g 0 0 0 0 0 0 223 264 86 44 30 866 38 28 33 123 233 261 0 t 0 0 0 0 0 0 175 167 37 33 22 74 24 33 13 59 171 172 0
ANAC075.DAP_M0685_AthalianaCistrome_shift0 (ANAC075.DAP:M0685:AthalianaCistrome)	0.767	0.404	2.954	0.912	0.922	684	1069	646	348	389	627.200	; assembly_18 versus ANAC075.DAP_M0685_AthalianaCistrome (ANAC075.DAP:M0685:AthalianaCistrome); m=9/13; ncol2=15; w=-5; offset=-5; strand=D; shift=0; score= 627.2; ArCkTgwwgawsAAG---- ; cor=0.767; Ncor=0.404; logoDP=2.954; NsEucl=0.912; NSW=0.922; rcor=684; rNcor=1069; rlogoDP=646; rNsEucl=348; rNSW=389; rank_mean=627.200; match_rank= a 433 165 34 0 0 148 291 196 127 214 327 15 596 456 0 0 0 0 0 c 0 0 542 0 0 76 52 97 134 117 9 253 0 143 0 0 0 0 0 g 101 369 0 363 0 369 6 136 255 139 63 299 3 0 599 0 0 0 0 t 65 65 23 236 599 6 250 170 83 129 200 32 0 0 0 0 0 0 0
TGA5_2_EEAD0137_EEADannot_shift1 (TGA5_2:EEAD0137:EEADannot)	0.723	0.442	3.243	0.903	0.896	921	921	617	546	690	739.000	; assembly_18 versus TGA5_2_EEAD0137_EEADannot (TGA5_2:EEAD0137:EEADannot); m=10/13; ncol2=15; w=-4; offset=-4; strand=D; shift=1; score= 739; -tGrwGawGRwGAwGa--- ; cor=0.723; Ncor=0.442; logoDP=3.243; NsEucl=0.903; NSW=0.896; rcor=921; rNcor=921; rlogoDP=617; rNsEucl=546; rNSW=690; rank_mean=739.000; match_rank= a 0 32 11 110 84 3 137 60 0 146 72 0 148 93 41 118 0 0 0 c 0 47 1 12 18 0 6 47 0 0 29 0 9 30 0 38 0 0 0 g 0 18 188 70 26 201 38 15 204 53 19 204 47 13 163 40 0 0 0 t 0 107 4 12 76 0 23 82 0 5 84 0 0 68 0 8 0 0 0
Zm00001d027846_MA1823.2_JASPAR_shift8 (Zm00001d027846:MA1823.2:JASPAR)	0.728	0.416	4.280	0.866	0.857	891	1013	476	989	1012	876.200	; assembly_18 versus Zm00001d027846_MA1823.2_JASPAR (Zm00001d027846:MA1823.2:JASPAR); m=11/13; ncol2=8; w=0; offset=3; strand=D; shift=8; score= 876.2; --------AAAGAAAA--- ; cor=0.728; Ncor=0.416; logoDP=4.280; NsEucl=0.866; NSW=0.857; rcor=891; rNcor=1013; rlogoDP=476; rNsEucl=989; rNSW=1012; rank_mean=876.200; match_rank= a 0 0 0 0 0 0 0 0 818 893 929 23 896 915 914 752 0 0 0 c 0 0 0 0 0 0 0 0 46 17 6 24 29 11 27 53 0 0 0 g 0 0 0 0 0 0 0 0 86 44 30 866 38 28 33 123 0 0 0 t 0 0 0 0 0 0 0 0 37 33 22 74 24 33 13 59 0 0 0
NTL8_MA1678.3_JASPAR_shift11 (NTL8:MA1678.3:JASPAR)	0.731	0.418	3.522	0.871	0.866	876	1009	577	970	963	879.000	; assembly_18 versus NTL8_MA1678.3_JASPAR (NTL8:MA1678.3:JASPAR); m=12/13; ncol2=8; w=0; offset=6; strand=D; shift=11; score= 879; -----------GAAGAAAC ; cor=0.731; Ncor=0.418; logoDP=3.522; NsEucl=0.871; NSW=0.866; rcor=876; rNcor=1009; rlogoDP=577; rNsEucl=970; rNSW=963; rank_mean=879.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 64 958 912 8 795 957 933 45 c 0 0 0 0 0 0 0 0 0 0 0 171 5 12 6 79 4 10 850 g 0 0 0 0 0 0 0 0 0 0 0 669 10 42 956 35 3 16 40 t 0 0 0 0 0 0 0 0 0 0 0 78 9 16 12 73 18 23 47
TRANSCRIPTION_1qnc_B_3D-footprint_rc_shift9 (TRANSCRIPTION:1qnc_B:3D-footprint_rc)	0.721	0.412	0.400	0.862	0.848	934	1029	960	1019	1044	997.200	; assembly_18 versus TRANSCRIPTION_1qnc_B_3D-footprint_rc (TRANSCRIPTION:1qnc_B:3D-footprint_rc); m=13/13; ncol2=8; w=0; offset=4; strand=R; shift=9; score= 997.2; ---------AATAAmAs-- ; cor=0.721; Ncor=0.412; logoDP=0.400; NsEucl=0.862; NSW=0.848; rcor=934; rNcor=1029; rlogoDP=960; rNsEucl=1019; rNSW=1044; rank_mean=997.200; match_rank= a 0 0 0 0 0 0 0 0 0 96 96 0 96 96 43 96 13 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 27 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 54 0 0 t 0 0 0 0 0 0 0 0 0 0 0 96 0 0 13 0 2 0 0

One-to-n matrix alignment; reference matrix: assembly_16_shift2 ; 28 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
assembly_16_shift2 (assembly_16)
; assembly_16; m=0 (reference); ncol1=10; shift=2; ncol=12; --wtCTTCACww ; Alignment reference a 0 0 116 96 0 0 0 0 404 0 123 131 c 0 0 80 76 404 0 0 404 0 404 86 81 g 0 0 58 68 0 0 0 0 0 0 69 60 t 0 0 150 164 0 404 404 0 0 0 126 132

AT5G04390_MA1736.1_JASPAR_shift1 (AT5G04390:MA1736.1:JASPAR) 0.780 0.709 5.908 0.905 0.909 617 94 239 503 541 398.800
; assembly_16 versus AT5G04390_MA1736.1_JASPAR (AT5G04390:MA1736.1:JASPAR); m=1/27; ncol2=11; w=-1; offset=-1; strand=D; shift=1; score= 398.8; -ywmywwCACTh ; cor=0.780; Ncor=0.709; logoDP=5.908; NsEucl=0.905; NSW=0.909; rcor=617; rNcor=94; rlogoDP=239; rNsEucl=503; rNSW=541; rank_mean=398.800; match_rank= a 0 175 401 382 145 270 270 0 1000 0 0 289 c 0 404 214 294 441 132 170 985 0 963 0 277 g 0 83.472 58.431 119 120.2 88.481 0 0 0 36.728 0 180 t 0 337 327 205 294 509 559 15.025 0 0 1000 254

CORE_EEAD0078_EEADannot_shift6 (CORE:EEAD0078:EEADannot) 0.908 0.454 7.700 0.885 0.934 98 874 71 833 248 424.800
; assembly_16 versus CORE_EEAD0078_EEADannot (CORE:EEAD0078:EEADannot); m=2/27; ncol2=5; w=0; offset=4; strand=D; shift=6; score= 424.8; ------TCACA- ; cor=0.908; Ncor=0.454; logoDP=7.700; NsEucl=0.885; NSW=0.934; rcor=98; rNcor=874; rlogoDP=71; rNsEucl=833; rNSW=248; rank_mean=424.800; match_rank= a 0 0 0 0 0 0 0 0 2 0 2 0 c 0 0 0 0 0 0 0 2 0 2 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 2 0 0 0 0 0

AT3G46070_MA1381.2_JASPAR_shift6 (AT3G46070:MA1381.2:JASPAR) 0.870 0.475 7.187 0.886 0.922 190 807 128 823 392 468.000
; assembly_16 versus AT3G46070_MA1381.2_JASPAR (AT3G46070:MA1381.2:JASPAR); m=3/27; ncol2=7; w=0; offset=4; strand=D; shift=6; score= 468; ------TCACTc ; cor=0.870; Ncor=0.475; logoDP=7.187; NsEucl=0.886; NSW=0.922; rcor=190; rNcor=807; rlogoDP=128; rNsEucl=823; rNSW=392; rank_mean=468.000; match_rank= a 0 0 0 0 0 0 9 0 200 2 0 14 c 0 0 0 0 0 0 0 202 0 200 0 131 g 0 0 0 0 0 0 0 0 0 0 0 22 t 0 0 0 0 0 0 193 0 2 0 202 35

HSFA1B_MA2019.2_JASPAR_shift0 (HSFA1B:MA2019.2:JASPAR) 0.872 0.436 5.577 0.894 0.932 181 940 280 711 262 474.800
; assembly_16 versus HSFA1B_MA2019.2_JASPAR (HSFA1B:MA2019.2:JASPAR); m=4/27; ncol2=8; w=-2; offset=-2; strand=D; shift=0; score= 474.8; GAArCTTC---- ; cor=0.872; Ncor=0.436; logoDP=5.577; NsEucl=0.894; NSW=0.932; rcor=181; rNcor=940; rlogoDP=280; rNsEucl=711; rNSW=262; rank_mean=474.800; match_rank= a 155 7359 7308 3914 216 345 122 95 0 0 0 0 c 105 86 54 804 6814 133 108 7300 0 0 0 0 g 7327 95 124 1940 401 77 101 122 0 0 0 0 t 73 120 174 1002 229 7105 7329 143 0 0 0 0

NTL8.DAP_M0671_AthalianaCistrome_shift0 (NTL8.DAP:M0671:AthalianaCistrome) 0.811 0.427 5.814 0.911 0.921 450 968 251 359 405 486.600
; assembly_16 versus NTL8.DAP_M0671_AthalianaCistrome (NTL8.DAP:M0671:AthalianaCistrome); m=5/27; ncol2=19; w=-2; offset=-2; strand=D; shift=0; score= 486.6; kTTyCTTCwyyy ; cor=0.811; Ncor=0.427; logoDP=5.814; NsEucl=0.911; NSW=0.921; rcor=450; rNcor=968; rlogoDP=251; rNsEucl=359; rNSW=405; rank_mean=486.600; match_rank= a 136 23 86 101 0 0 0 36 291 121 78 146 c 116 4 5 184 591 71 5 456 67 162 236 151 g 189 21 10 87 0 0 0 46 81 71 110 96 t 150 543 490 219 0 520 586 53 152 237 167 198

STZ.ampDAP_M0304_AthalianaCistrome_shift3 (STZ.ampDAP:M0304:AthalianaCistrome) 0.785 0.628 5.598 0.882 0.890 579 254 278 863 762 547.200
; assembly_16 versus STZ.ampDAP_M0304_AthalianaCistrome (STZ.ampDAP:M0304:AthalianaCistrome); m=6/27; ncol2=8; w=0; offset=1; strand=D; shift=3; score= 547.2; ---wsttCACT- ; cor=0.785; Ncor=0.628; logoDP=5.598; NsEucl=0.882; NSW=0.890; rcor=579; rNcor=254; rlogoDP=278; rNsEucl=863; rNSW=762; rank_mean=547.200; match_rank= a 0 0 0 323 36 102 122 0 599 0 0 0 c 0 0 0 66 275 135 131 580 0 532 0 0 g 0 0 0 21 212 24 0 0 0 67 0 0 t 0 0 0 189 76 338 346 19 0 0 599 0

At5g04390.DAP_M0308_AthalianaCistrome_rc_shift1 (At5g04390.DAP:M0308:AthalianaCistrome_rc) 0.780 0.709 0.285 0.904 0.909 618 95 1011 504 542 554.000
; assembly_16 versus At5g04390.DAP_M0308_AthalianaCistrome_rc (At5g04390.DAP:M0308:AthalianaCistrome_rc); m=7/27; ncol2=11; w=-1; offset=-1; strand=R; shift=1; score= 554; -ywmywwCACTh ; cor=0.780; Ncor=0.709; logoDP=0.285; NsEucl=0.904; NSW=0.909; rcor=618; rNcor=95; rlogoDP=1011; rNsEucl=504; rNSW=542; rank_mean=554.000; match_rank= a 0 105 240 229 87 162 162 0 599 0 0 173 c 0 242 128 176 264 79 102 590 0 577 0 166 g 0 50 35 71 72 53 0 0 0 22 0 108 t 0 202 196 123 176 305 335 9 0 0 599 152

AT3G46070_MA1381.1_JASPAR_shift0 (AT3G46070:MA1381.1:JASPAR) 0.754 0.503 7.377 0.896 0.892 751 708 103 672 732 593.200
; assembly_16 versus AT3G46070_MA1381.1_JASPAR (AT3G46070:MA1381.1:JASPAR); m=8/27; ncol2=15; w=-2; offset=-2; strand=D; shift=0; score= 593.2; yywhyyTCACTc ; cor=0.754; Ncor=0.503; logoDP=7.377; NsEucl=0.896; NSW=0.892; rcor=751; rNcor=708; rlogoDP=103; rNsEucl=672; rNSW=732; rank_mean=593.200; match_rank= a 45 27 78 63 18 48 9 0 200 2 0 14 c 53 91 47 55 79 64 0 202 0 200 0 131 g 14 15 8 16 14 19 0 0 0 0 0 22 t 90 69 69 68 91 71 193 0 2 0 202 35

NTL8_MA1678.3_JASPAR_rc_shift0 (NTL8:MA1678.3:JASPAR_rc) 0.867 0.433 1.192 0.890 0.928 196 947 823 770 319 611.000
; assembly_16 versus NTL8_MA1678.3_JASPAR_rc (NTL8:MA1678.3:JASPAR_rc); m=9/27; ncol2=8; w=-2; offset=-2; strand=R; shift=0; score= 611; GTTTCTTC---- ; cor=0.867; Ncor=0.433; logoDP=1.192; NsEucl=0.890; NSW=0.928; rcor=196; rNcor=947; rlogoDP=823; rNsEucl=770; rNSW=319; rank_mean=611.000; match_rank= a 47 23 18 73 12 16 9 78 0 0 0 0 c 40 16 3 35 956 42 10 669 0 0 0 0 g 850 10 4 79 6 12 5 171 0 0 0 0 t 45 933 957 795 8 912 958 64 0 0 0 0

AGL80_UN0852.1_JASPAR_shift6 (AGL80:UN0852.1:JASPAR) 0.821 0.493 7.719 0.857 0.878 387 740 69 1033 859 617.600
; assembly_16 versus AGL80_UN0852.1_JASPAR (AGL80:UN0852.1:JASPAR); m=10/27; ncol2=6; w=0; offset=4; strand=D; shift=6; score= 617.6; ------TCACCA ; cor=0.821; Ncor=0.493; logoDP=7.719; NsEucl=0.857; NSW=0.878; rcor=387; rNcor=740; rlogoDP=69; rNsEucl=1033; rNSW=859; rank_mean=617.600; match_rank= a 0 0 0 0 0 0 0 0 1000 0 0 1000 c 0 0 0 0 0 0 0 1000 0 1000 1000 0 g 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 1000 0 0 0 0 0

AT5G04390_MA1736.2_JASPAR_shift6 (AT5G04390:MA1736.2:JASPAR) 0.845 0.423 5.676 0.863 0.906 277 995 269 1014 579 626.800
; assembly_16 versus AT5G04390_MA1736.2_JASPAR (AT5G04390:MA1736.2:JASPAR); m=11/27; ncol2=5; w=0; offset=4; strand=D; shift=6; score= 626.8; ------wCACT- ; cor=0.845; Ncor=0.423; logoDP=5.676; NsEucl=0.863; NSW=0.906; rcor=277; rNcor=995; rlogoDP=269; rNsEucl=1014; rNSW=579; rank_mean=626.800; match_rank= a 0 0 0 0 0 0 270 0 1000 0 0 0 c 0 0 0 0 0 0 170 985 0 963 0 0 g 0 0 0 0 0 0 0 0 0 37 0 0 t 0 0 0 0 0 0 559 15 0 0 1000 0

At3g59060_MA0562.1_JASPAR_shift6 (At3g59060:MA0562.1:JASPAR) 0.829 0.414 6.600 0.872 0.902 351 1020 187 957 620 627.000
; assembly_16 versus At3g59060_MA0562.1_JASPAR (At3g59060:MA0562.1:JASPAR); m=12/27; ncol2=8; w=0; offset=4; strand=D; shift=6; score= 627; ------YCACRT ; cor=0.829; Ncor=0.414; logoDP=6.600; NsEucl=0.872; NSW=0.902; rcor=351; rNcor=1020; rlogoDP=187; rNsEucl=957; rNSW=620; rank_mean=627.000; match_rank= a 0 0 0 0 0 0 0 0 286 0 91 0 c 0 0 0 0 0 0 78 286 0 286 0 0 g 0 0 0 0 0 0 0 0 0 0 195 0 t 0 0 0 0 0 0 208 0 0 0 0 286

AGL55_MA1202.1_JASPAR_shift6 (AGL55:MA1202.1:JASPAR) 0.811 0.487 7.035 0.857 0.877 447 768 142 1036 875 653.600
; assembly_16 versus AGL55_MA1202.1_JASPAR (AGL55:MA1202.1:JASPAR); m=13/27; ncol2=6; w=0; offset=4; strand=D; shift=6; score= 653.6; ------TCACCA ; cor=0.811; Ncor=0.487; logoDP=7.035; NsEucl=0.857; NSW=0.877; rcor=447; rNcor=768; rlogoDP=142; rNsEucl=1036; rNSW=875; rank_mean=653.600; match_rank= a 0 0 0 0 0 0 0 0 90 0 0 90 c 0 0 0 0 0 0 5 90 0 90 90 0 g 0 0 0 0 0 0 4 0 0 0 0 0 t 0 0 0 0 0 0 81 0 0 0 0 0

At2g48100.DAP_M0339_AthalianaCistrome_shift6 (At2g48100.DAP:M0339:AthalianaCistrome) 0.810 0.486 7.099 0.856 0.876 457 770 138 1040 879 656.800
; assembly_16 versus At2g48100.DAP_M0339_AthalianaCistrome (At2g48100.DAP:M0339:AthalianaCistrome); m=14/27; ncol2=6; w=0; offset=4; strand=D; shift=6; score= 656.8; ------TCACCA ; cor=0.810; Ncor=0.486; logoDP=7.099; NsEucl=0.856; NSW=0.876; rcor=457; rNcor=770; rlogoDP=138; rNsEucl=1040; rNSW=879; rank_mean=656.800; match_rank= a 0 0 0 0 0 0 4 0 38 0 0 38 c 0 0 0 0 0 0 0 38 0 38 38 0 g 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 34 0 0 0 0 0

NAC86_B73_1_m1_EEAD0489_EEADannot_shift1 (NAC86_B73_1_m1:EEAD0489:EEADannot) 0.719 0.480 5.572 0.891 0.882 950 784 281 756 829 720.000
; assembly_16 versus NAC86_B73_1_m1_EEAD0489_EEADannot (NAC86_B73_1_m1:EEAD0489:EEADannot); m=15/27; ncol2=15; w=-1; offset=-1; strand=D; shift=1; score= 720; -TTGCTTcamww ; cor=0.719; Ncor=0.480; logoDP=5.572; NsEucl=0.891; NSW=0.882; rcor=950; rNcor=784; rlogoDP=281; rNsEucl=756; rNSW=829; rank_mean=720.000; match_rank= a 0 3 4 0 0 0 0 13 46 28 31 31 c 0 0 4 5 100 0 0 64 14 40 19 17 g 0 0 0 95 0 12 0 17 24 20 18 17 t 0 97 92 0 0 88 100 6 16 12 32 35

ASHR1.DAP_M0716_AthalianaCistrome_shift0 (ASHR1.DAP:M0716:AthalianaCistrome) 0.715 0.477 7.421 0.886 0.870 975 792 97 826 936 725.200
; assembly_16 versus ASHR1.DAP_M0716_AthalianaCistrome (ASHR1.DAP:M0716:AthalianaCistrome); m=16/27; ncol2=15; w=-2; offset=-2; strand=D; shift=0; score= 725.2; tyatcwTCACCA ; cor=0.715; Ncor=0.477; logoDP=7.421; NsEucl=0.886; NSW=0.870; rcor=975; rNcor=792; rlogoDP=97; rNsEucl=826; rNSW=936; rank_mean=725.200; match_rank= a 67 50 93 64 43 112 10 0 270 0 0 270 c 67 91 54 53 134 50 2 270 0 268 270 0 g 32 39 58 49 40 38 0 0 0 0 0 0 t 104 90 65 104 53 70 258 0 0 2 0 0

NAC71_Mo17_1_EEAD0486_EEADannot_shift1 (NAC71_Mo17_1:EEAD0486:EEADannot) 0.712 0.474 5.315 0.891 0.880 1005 809 328 765 839 749.200
; assembly_16 versus NAC71_Mo17_1_EEAD0486_EEADannot (NAC71_Mo17_1:EEAD0486:EEADannot); m=17/27; ncol2=15; w=-1; offset=-1; strand=D; shift=1; score= 749.2; -TTGCTTcamtd ; cor=0.712; Ncor=0.474; logoDP=5.315; NsEucl=0.891; NSW=0.880; rcor=1005; rNcor=809; rlogoDP=328; rNsEucl=765; rNSW=839; rank_mean=749.200; match_rank= a 0 4 3 5 0 0 0 15 47 30 24 28 c 0 1 5 2 100 0 0 59 16 42 16 16 g 0 1 0 93 0 18 0 21 17 14 18 25 t 0 94 92 0 0 82 100 5 20 14 42 31

At1g70910.DAP_M0349_AthalianaCistrome_shift5 (At1g70910.DAP:M0349:AthalianaCistrome) 0.728 0.510 7.766 0.847 0.836 890 681 62 1068 1065 753.200
; assembly_16 versus At1g70910.DAP_M0349_AthalianaCistrome (At1g70910.DAP:M0349:AthalianaCistrome); m=18/27; ncol2=7; w=0; offset=3; strand=D; shift=5; score= 753.2; -----mTCACCA ; cor=0.728; Ncor=0.510; logoDP=7.766; NsEucl=0.847; NSW=0.836; rcor=890; rNcor=681; rlogoDP=62; rNsEucl=1068; rNSW=1065; rank_mean=753.200; match_rank= a 0 0 0 0 0 19 0 0 50 0 0 50 c 0 0 0 0 0 16 0 50 0 50 50 0 g 0 0 0 0 0 3 0 0 0 0 0 0 t 0 0 0 0 0 12 50 0 0 0 0 0

DEP_UN0855.1_JASPAR_rc_shift6 (DEP:UN0855.1:JASPAR_rc) 0.821 0.493 1.951 0.857 0.878 387 740 748 1033 859 753.400
; assembly_16 versus DEP_UN0855.1_JASPAR_rc (DEP:UN0855.1:JASPAR_rc); m=19/27; ncol2=6; w=0; offset=4; strand=R; shift=6; score= 753.4; ------TCACCA ; cor=0.821; Ncor=0.493; logoDP=1.951; NsEucl=0.857; NSW=0.878; rcor=387; rNcor=740; rlogoDP=748; rNsEucl=1033; rNSW=859; rank_mean=753.400; match_rank= a 0 0 0 0 0 0 0 0 1000 0 0 1000 c 0 0 0 0 0 0 0 1000 0 1000 1000 0 g 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 1000 0 0 0 0 0

FEM111.DAP_M0491_AthalianaCistrome_rc_shift6 (FEM111.DAP:M0491:AthalianaCistrome_rc) 0.821 0.493 1.951 0.857 0.878 387 740 748 1033 859 753.400
; assembly_16 versus FEM111.DAP_M0491_AthalianaCistrome_rc (FEM111.DAP:M0491:AthalianaCistrome_rc); m=20/27; ncol2=6; w=0; offset=4; strand=R; shift=6; score= 753.4; ------TCACCA ; cor=0.821; Ncor=0.493; logoDP=1.951; NsEucl=0.857; NSW=0.878; rcor=387; rNcor=740; rlogoDP=748; rNsEucl=1033; rNSW=859; rank_mean=753.400; match_rank= a 0 0 0 0 0 0 0 0 54 0 0 54 c 0 0 0 0 0 0 0 54 0 54 54 0 g 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 54 0 0 0 0 0

BHLH113_Mo17_1_EEAD0210_EEADannot_shift1 (BHLH113_Mo17_1:EEAD0210:EEADannot) 0.709 0.473 5.949 0.888 0.875 1031 820 235 806 898 758.000
; assembly_16 versus BHLH113_Mo17_1_EEAD0210_EEADannot (BHLH113_Mo17_1:EEAD0210:EEADannot); m=21/27; ncol2=15; w=-1; offset=-1; strand=D; shift=1; score= 758; -aaymtTCAyCA ; cor=0.709; Ncor=0.473; logoDP=5.949; NsEucl=0.888; NSW=0.875; rcor=1031; rNcor=820; rlogoDP=235; rNsEucl=806; rNSW=898; rank_mean=758.000; match_rank= a 0 59 42 0 31 19 10 0 100 0 0 76 c 0 12 22 28 47 20 0 99 0 54 100 0 g 0 10 15 7 18 7 0 0 0 0 0 24 t 0 19 21 65 4 54 90 1 0 46 0 0

NAC115_Mo17_1_EEAD0464_EEADannot_rc_shift1 (NAC115_Mo17_1:EEAD0464:EEADannot_rc) 0.755 0.503 0.321 0.897 0.893 742 704 993 663 720 764.400
; assembly_16 versus NAC115_Mo17_1_EEAD0464_EEADannot_rc (NAC115_Mo17_1:EEAD0464:EEADannot_rc); m=22/27; ncol2=15; w=-1; offset=-1; strand=R; shift=1; score= 764.4; -TTGCTTCamwd ; cor=0.755; Ncor=0.503; logoDP=0.321; NsEucl=0.897; NSW=0.893; rcor=742; rNcor=704; rlogoDP=993; rNsEucl=663; rNSW=720; rank_mean=764.400; match_rank= a 0 2 2 2 0 0 0 9 53 27 30 32 c 0 1 1 2 100 0 0 75 9 49 16 11 g 0 0 0 96 0 6 0 10 20 11 16 28 t 0 97 97 0 0 94 100 6 18 13 38 29

AT2G48100_UN0843.1_JASPAR_rc_shift6 (AT2G48100:UN0843.1:JASPAR_rc) 0.810 0.486 1.946 0.856 0.876 455 769 750 1039 878 778.200
; assembly_16 versus AT2G48100_UN0843.1_JASPAR_rc (AT2G48100:UN0843.1:JASPAR_rc); m=23/27; ncol2=6; w=0; offset=4; strand=R; shift=6; score= 778.2; ------TCACCA ; cor=0.810; Ncor=0.486; logoDP=1.946; NsEucl=0.856; NSW=0.876; rcor=455; rNcor=769; rlogoDP=750; rNsEucl=1039; rNSW=878; rank_mean=778.200; match_rank= a 0 0 0 0 0 0 105 0 1000 0 0 1000 c 0 0 0 0 0 0 0 1000 0 1000 1000 0 g 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 895 0 0 0 0 0

ANAC096.DAP_M0645_AthalianaCistrome_rc_shift1 (ANAC096.DAP:M0645:AthalianaCistrome_rc) 0.728 0.455 0.242 0.895 0.890 894 871 1044 685 753 849.400
; assembly_16 versus ANAC096.DAP_M0645_AthalianaCistrome_rc (ANAC096.DAP:M0645:AthalianaCistrome_rc); m=24/27; ncol2=16; w=-1; offset=-1; strand=R; shift=1; score= 849.4; -TTrCTTswtyy ; cor=0.728; Ncor=0.455; logoDP=0.242; NsEucl=0.895; NSW=0.890; rcor=894; rNcor=871; rlogoDP=1044; rNsEucl=685; rNSW=753; rank_mean=849.400; match_rank= a 0 6 53 190 3 0 0 42 283 138 88 105 c 0 0 0 84 594 0 0 271 65 136 212 172 g 0 0 17 195 0 44 0 217 48 109 106 59 t 0 591 527 128 0 553 597 67 201 214 191 261

ANAC062.DAP_M0684_AthalianaCistrome_rc_shift2 (ANAC062.DAP:M0684:AthalianaCistrome_rc) 0.709 0.473 0.156 0.891 0.882 1027 816 1072 757 830 900.400
; assembly_16 versus ANAC062.DAP_M0684_AthalianaCistrome_rc (ANAC062.DAP:M0684:AthalianaCistrome_rc); m=25/27; ncol2=15; w=0; offset=0; strand=R; shift=2; score= 900.4; --TmCTTmatmr ; cor=0.709; Ncor=0.473; logoDP=0.156; NsEucl=0.891; NSW=0.882; rcor=1027; rNcor=816; rlogoDP=1072; rNsEucl=757; rNSW=830; rank_mean=900.400; match_rank= a 0 0 83 234 1 0 0 349 291 74 153 226 c 0 0 0 156 597 0 0 226 74 149 236 83 g 0 0 11 104 0 0 0 19 99 109 94 157 t 0 0 504 104 0 598 598 4 134 266 115 132

WRKY57_MA1089.2_JASPAR_rc_shift5 (WRKY57:MA1089.2:JASPAR_rc) 0.703 0.422 0.267 0.833 0.832 1072 999 1024 1083 1074 1050.400
; assembly_16 versus WRKY57_MA1089.2_JASPAR_rc (WRKY57:MA1089.2:JASPAR_rc); m=26/27; ncol2=6; w=0; offset=3; strand=R; shift=5; score= 1050.4; -----TTGACy- ; cor=0.703; Ncor=0.422; logoDP=0.267; NsEucl=0.833; NSW=0.832; rcor=1072; rNcor=999; rlogoDP=1024; rNsEucl=1083; rNSW=1074; rank_mean=1050.400; match_rank= a 0 0 0 0 0 56 50 27 969 75 114 0 c 0 0 0 0 0 113 23 7 0 870 312 0 g 0 0 0 0 0 14 48 914 0 17 76 0 t 0 0 0 0 0 817 879 52 30 38 499 0

WRKY18_MA1077.2_JASPAR_rc_shift5 (WRKY18:MA1077.2:JASPAR_rc) 0.705 0.423 0.054 0.823 0.812 1063 996 1087 1084 1084 1062.800
; assembly_16 versus WRKY18_MA1077.2_JASPAR_rc (WRKY18:MA1077.2:JASPAR_rc); m=27/27; ncol2=6; w=0; offset=3; strand=R; shift=5; score= 1062.8; -----TTGACy- ; cor=0.705; Ncor=0.423; logoDP=0.054; NsEucl=0.823; NSW=0.812; rcor=1063; rNcor=996; rlogoDP=1087; rNsEucl=1084; rNSW=1084; rank_mean=1062.800; match_rank= a 0 0 0 0 0 16 5 2 997 11 8 0 c 0 0 0 0 0 11 2 0 2 988 585 0 g 0 0 0 0 0 10 8 997 0 1 16 0 t 0 0 0 0 0 964 985 1 0 1 392 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	Aligned matrices
assembly_16_shift2 (assembly_16)												; assembly_16; m=0 (reference); ncol1=10; shift=2; ncol=12; --wtCTTCACww ; Alignment reference a 0 0 116 96 0 0 0 0 404 0 123 131 c 0 0 80 76 404 0 0 404 0 404 86 81 g 0 0 58 68 0 0 0 0 0 0 69 60 t 0 0 150 164 0 404 404 0 0 0 126 132
AT5G04390_MA1736.1_JASPAR_shift1 (AT5G04390:MA1736.1:JASPAR)	0.780	0.709	5.908	0.905	0.909	617	94	239	503	541	398.800	; assembly_16 versus AT5G04390_MA1736.1_JASPAR (AT5G04390:MA1736.1:JASPAR); m=1/27; ncol2=11; w=-1; offset=-1; strand=D; shift=1; score= 398.8; -ywmywwCACTh ; cor=0.780; Ncor=0.709; logoDP=5.908; NsEucl=0.905; NSW=0.909; rcor=617; rNcor=94; rlogoDP=239; rNsEucl=503; rNSW=541; rank_mean=398.800; match_rank= a 0 175 401 382 145 270 270 0 1000 0 0 289 c 0 404 214 294 441 132 170 985 0 963 0 277 g 0 83.472 58.431 119 120.2 88.481 0 0 0 36.728 0 180 t 0 337 327 205 294 509 559 15.025 0 0 1000 254
CORE_EEAD0078_EEADannot_shift6 (CORE:EEAD0078:EEADannot)	0.908	0.454	7.700	0.885	0.934	98	874	71	833	248	424.800	; assembly_16 versus CORE_EEAD0078_EEADannot (CORE:EEAD0078:EEADannot); m=2/27; ncol2=5; w=0; offset=4; strand=D; shift=6; score= 424.8; ------TCACA- ; cor=0.908; Ncor=0.454; logoDP=7.700; NsEucl=0.885; NSW=0.934; rcor=98; rNcor=874; rlogoDP=71; rNsEucl=833; rNSW=248; rank_mean=424.800; match_rank= a 0 0 0 0 0 0 0 0 2 0 2 0 c 0 0 0 0 0 0 0 2 0 2 0 0 g 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 2 0 0 0 0 0
AT3G46070_MA1381.2_JASPAR_shift6 (AT3G46070:MA1381.2:JASPAR)	0.870	0.475	7.187	0.886	0.922	190	807	128	823	392	468.000	; assembly_16 versus AT3G46070_MA1381.2_JASPAR (AT3G46070:MA1381.2:JASPAR); m=3/27; ncol2=7; w=0; offset=4; strand=D; shift=6; score= 468; ------TCACTc ; cor=0.870; Ncor=0.475; logoDP=7.187; NsEucl=0.886; NSW=0.922; rcor=190; rNcor=807; rlogoDP=128; rNsEucl=823; rNSW=392; rank_mean=468.000; match_rank= a 0 0 0 0 0 0 9 0 200 2 0 14 c 0 0 0 0 0 0 0 202 0 200 0 131 g 0 0 0 0 0 0 0 0 0 0 0 22 t 0 0 0 0 0 0 193 0 2 0 202 35
HSFA1B_MA2019.2_JASPAR_shift0 (HSFA1B:MA2019.2:JASPAR)	0.872	0.436	5.577	0.894	0.932	181	940	280	711	262	474.800	; assembly_16 versus HSFA1B_MA2019.2_JASPAR (HSFA1B:MA2019.2:JASPAR); m=4/27; ncol2=8; w=-2; offset=-2; strand=D; shift=0; score= 474.8; GAArCTTC---- ; cor=0.872; Ncor=0.436; logoDP=5.577; NsEucl=0.894; NSW=0.932; rcor=181; rNcor=940; rlogoDP=280; rNsEucl=711; rNSW=262; rank_mean=474.800; match_rank= a 155 7359 7308 3914 216 345 122 95 0 0 0 0 c 105 86 54 804 6814 133 108 7300 0 0 0 0 g 7327 95 124 1940 401 77 101 122 0 0 0 0 t 73 120 174 1002 229 7105 7329 143 0 0 0 0
NTL8.DAP_M0671_AthalianaCistrome_shift0 (NTL8.DAP:M0671:AthalianaCistrome)	0.811	0.427	5.814	0.911	0.921	450	968	251	359	405	486.600	; assembly_16 versus NTL8.DAP_M0671_AthalianaCistrome (NTL8.DAP:M0671:AthalianaCistrome); m=5/27; ncol2=19; w=-2; offset=-2; strand=D; shift=0; score= 486.6; kTTyCTTCwyyy ; cor=0.811; Ncor=0.427; logoDP=5.814; NsEucl=0.911; NSW=0.921; rcor=450; rNcor=968; rlogoDP=251; rNsEucl=359; rNSW=405; rank_mean=486.600; match_rank= a 136 23 86 101 0 0 0 36 291 121 78 146 c 116 4 5 184 591 71 5 456 67 162 236 151 g 189 21 10 87 0 0 0 46 81 71 110 96 t 150 543 490 219 0 520 586 53 152 237 167 198
STZ.ampDAP_M0304_AthalianaCistrome_shift3 (STZ.ampDAP:M0304:AthalianaCistrome)	0.785	0.628	5.598	0.882	0.890	579	254	278	863	762	547.200	; assembly_16 versus STZ.ampDAP_M0304_AthalianaCistrome (STZ.ampDAP:M0304:AthalianaCistrome); m=6/27; ncol2=8; w=0; offset=1; strand=D; shift=3; score= 547.2; ---wsttCACT- ; cor=0.785; Ncor=0.628; logoDP=5.598; NsEucl=0.882; NSW=0.890; rcor=579; rNcor=254; rlogoDP=278; rNsEucl=863; rNSW=762; rank_mean=547.200; match_rank= a 0 0 0 323 36 102 122 0 599 0 0 0 c 0 0 0 66 275 135 131 580 0 532 0 0 g 0 0 0 21 212 24 0 0 0 67 0 0 t 0 0 0 189 76 338 346 19 0 0 599 0
At5g04390.DAP_M0308_AthalianaCistrome_rc_shift1 (At5g04390.DAP:M0308:AthalianaCistrome_rc)	0.780	0.709	0.285	0.904	0.909	618	95	1011	504	542	554.000	; assembly_16 versus At5g04390.DAP_M0308_AthalianaCistrome_rc (At5g04390.DAP:M0308:AthalianaCistrome_rc); m=7/27; ncol2=11; w=-1; offset=-1; strand=R; shift=1; score= 554; -ywmywwCACTh ; cor=0.780; Ncor=0.709; logoDP=0.285; NsEucl=0.904; NSW=0.909; rcor=618; rNcor=95; rlogoDP=1011; rNsEucl=504; rNSW=542; rank_mean=554.000; match_rank= a 0 105 240 229 87 162 162 0 599 0 0 173 c 0 242 128 176 264 79 102 590 0 577 0 166 g 0 50 35 71 72 53 0 0 0 22 0 108 t 0 202 196 123 176 305 335 9 0 0 599 152
AT3G46070_MA1381.1_JASPAR_shift0 (AT3G46070:MA1381.1:JASPAR)	0.754	0.503	7.377	0.896	0.892	751	708	103	672	732	593.200	; assembly_16 versus AT3G46070_MA1381.1_JASPAR (AT3G46070:MA1381.1:JASPAR); m=8/27; ncol2=15; w=-2; offset=-2; strand=D; shift=0; score= 593.2; yywhyyTCACTc ; cor=0.754; Ncor=0.503; logoDP=7.377; NsEucl=0.896; NSW=0.892; rcor=751; rNcor=708; rlogoDP=103; rNsEucl=672; rNSW=732; rank_mean=593.200; match_rank= a 45 27 78 63 18 48 9 0 200 2 0 14 c 53 91 47 55 79 64 0 202 0 200 0 131 g 14 15 8 16 14 19 0 0 0 0 0 22 t 90 69 69 68 91 71 193 0 2 0 202 35
NTL8_MA1678.3_JASPAR_rc_shift0 (NTL8:MA1678.3:JASPAR_rc)	0.867	0.433	1.192	0.890	0.928	196	947	823	770	319	611.000	; assembly_16 versus NTL8_MA1678.3_JASPAR_rc (NTL8:MA1678.3:JASPAR_rc); m=9/27; ncol2=8; w=-2; offset=-2; strand=R; shift=0; score= 611; GTTTCTTC---- ; cor=0.867; Ncor=0.433; logoDP=1.192; NsEucl=0.890; NSW=0.928; rcor=196; rNcor=947; rlogoDP=823; rNsEucl=770; rNSW=319; rank_mean=611.000; match_rank= a 47 23 18 73 12 16 9 78 0 0 0 0 c 40 16 3 35 956 42 10 669 0 0 0 0 g 850 10 4 79 6 12 5 171 0 0 0 0 t 45 933 957 795 8 912 958 64 0 0 0 0
AGL80_UN0852.1_JASPAR_shift6 (AGL80:UN0852.1:JASPAR)	0.821	0.493	7.719	0.857	0.878	387	740	69	1033	859	617.600	; assembly_16 versus AGL80_UN0852.1_JASPAR (AGL80:UN0852.1:JASPAR); m=10/27; ncol2=6; w=0; offset=4; strand=D; shift=6; score= 617.6; ------TCACCA ; cor=0.821; Ncor=0.493; logoDP=7.719; NsEucl=0.857; NSW=0.878; rcor=387; rNcor=740; rlogoDP=69; rNsEucl=1033; rNSW=859; rank_mean=617.600; match_rank= a 0 0 0 0 0 0 0 0 1000 0 0 1000 c 0 0 0 0 0 0 0 1000 0 1000 1000 0 g 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 1000 0 0 0 0 0
AT5G04390_MA1736.2_JASPAR_shift6 (AT5G04390:MA1736.2:JASPAR)	0.845	0.423	5.676	0.863	0.906	277	995	269	1014	579	626.800	; assembly_16 versus AT5G04390_MA1736.2_JASPAR (AT5G04390:MA1736.2:JASPAR); m=11/27; ncol2=5; w=0; offset=4; strand=D; shift=6; score= 626.8; ------wCACT- ; cor=0.845; Ncor=0.423; logoDP=5.676; NsEucl=0.863; NSW=0.906; rcor=277; rNcor=995; rlogoDP=269; rNsEucl=1014; rNSW=579; rank_mean=626.800; match_rank= a 0 0 0 0 0 0 270 0 1000 0 0 0 c 0 0 0 0 0 0 170 985 0 963 0 0 g 0 0 0 0 0 0 0 0 0 37 0 0 t 0 0 0 0 0 0 559 15 0 0 1000 0
At3g59060_MA0562.1_JASPAR_shift6 (At3g59060:MA0562.1:JASPAR)	0.829	0.414	6.600	0.872	0.902	351	1020	187	957	620	627.000	; assembly_16 versus At3g59060_MA0562.1_JASPAR (At3g59060:MA0562.1:JASPAR); m=12/27; ncol2=8; w=0; offset=4; strand=D; shift=6; score= 627; ------YCACRT ; cor=0.829; Ncor=0.414; logoDP=6.600; NsEucl=0.872; NSW=0.902; rcor=351; rNcor=1020; rlogoDP=187; rNsEucl=957; rNSW=620; rank_mean=627.000; match_rank= a 0 0 0 0 0 0 0 0 286 0 91 0 c 0 0 0 0 0 0 78 286 0 286 0 0 g 0 0 0 0 0 0 0 0 0 0 195 0 t 0 0 0 0 0 0 208 0 0 0 0 286
AGL55_MA1202.1_JASPAR_shift6 (AGL55:MA1202.1:JASPAR)	0.811	0.487	7.035	0.857	0.877	447	768	142	1036	875	653.600	; assembly_16 versus AGL55_MA1202.1_JASPAR (AGL55:MA1202.1:JASPAR); m=13/27; ncol2=6; w=0; offset=4; strand=D; shift=6; score= 653.6; ------TCACCA ; cor=0.811; Ncor=0.487; logoDP=7.035; NsEucl=0.857; NSW=0.877; rcor=447; rNcor=768; rlogoDP=142; rNsEucl=1036; rNSW=875; rank_mean=653.600; match_rank= a 0 0 0 0 0 0 0 0 90 0 0 90 c 0 0 0 0 0 0 5 90 0 90 90 0 g 0 0 0 0 0 0 4 0 0 0 0 0 t 0 0 0 0 0 0 81 0 0 0 0 0
At2g48100.DAP_M0339_AthalianaCistrome_shift6 (At2g48100.DAP:M0339:AthalianaCistrome)	0.810	0.486	7.099	0.856	0.876	457	770	138	1040	879	656.800	; assembly_16 versus At2g48100.DAP_M0339_AthalianaCistrome (At2g48100.DAP:M0339:AthalianaCistrome); m=14/27; ncol2=6; w=0; offset=4; strand=D; shift=6; score= 656.8; ------TCACCA ; cor=0.810; Ncor=0.486; logoDP=7.099; NsEucl=0.856; NSW=0.876; rcor=457; rNcor=770; rlogoDP=138; rNsEucl=1040; rNSW=879; rank_mean=656.800; match_rank= a 0 0 0 0 0 0 4 0 38 0 0 38 c 0 0 0 0 0 0 0 38 0 38 38 0 g 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 34 0 0 0 0 0
NAC86_B73_1_m1_EEAD0489_EEADannot_shift1 (NAC86_B73_1_m1:EEAD0489:EEADannot)	0.719	0.480	5.572	0.891	0.882	950	784	281	756	829	720.000	; assembly_16 versus NAC86_B73_1_m1_EEAD0489_EEADannot (NAC86_B73_1_m1:EEAD0489:EEADannot); m=15/27; ncol2=15; w=-1; offset=-1; strand=D; shift=1; score= 720; -TTGCTTcamww ; cor=0.719; Ncor=0.480; logoDP=5.572; NsEucl=0.891; NSW=0.882; rcor=950; rNcor=784; rlogoDP=281; rNsEucl=756; rNSW=829; rank_mean=720.000; match_rank= a 0 3 4 0 0 0 0 13 46 28 31 31 c 0 0 4 5 100 0 0 64 14 40 19 17 g 0 0 0 95 0 12 0 17 24 20 18 17 t 0 97 92 0 0 88 100 6 16 12 32 35
ASHR1.DAP_M0716_AthalianaCistrome_shift0 (ASHR1.DAP:M0716:AthalianaCistrome)	0.715	0.477	7.421	0.886	0.870	975	792	97	826	936	725.200	; assembly_16 versus ASHR1.DAP_M0716_AthalianaCistrome (ASHR1.DAP:M0716:AthalianaCistrome); m=16/27; ncol2=15; w=-2; offset=-2; strand=D; shift=0; score= 725.2; tyatcwTCACCA ; cor=0.715; Ncor=0.477; logoDP=7.421; NsEucl=0.886; NSW=0.870; rcor=975; rNcor=792; rlogoDP=97; rNsEucl=826; rNSW=936; rank_mean=725.200; match_rank= a 67 50 93 64 43 112 10 0 270 0 0 270 c 67 91 54 53 134 50 2 270 0 268 270 0 g 32 39 58 49 40 38 0 0 0 0 0 0 t 104 90 65 104 53 70 258 0 0 2 0 0
NAC71_Mo17_1_EEAD0486_EEADannot_shift1 (NAC71_Mo17_1:EEAD0486:EEADannot)	0.712	0.474	5.315	0.891	0.880	1005	809	328	765	839	749.200	; assembly_16 versus NAC71_Mo17_1_EEAD0486_EEADannot (NAC71_Mo17_1:EEAD0486:EEADannot); m=17/27; ncol2=15; w=-1; offset=-1; strand=D; shift=1; score= 749.2; -TTGCTTcamtd ; cor=0.712; Ncor=0.474; logoDP=5.315; NsEucl=0.891; NSW=0.880; rcor=1005; rNcor=809; rlogoDP=328; rNsEucl=765; rNSW=839; rank_mean=749.200; match_rank= a 0 4 3 5 0 0 0 15 47 30 24 28 c 0 1 5 2 100 0 0 59 16 42 16 16 g 0 1 0 93 0 18 0 21 17 14 18 25 t 0 94 92 0 0 82 100 5 20 14 42 31
At1g70910.DAP_M0349_AthalianaCistrome_shift5 (At1g70910.DAP:M0349:AthalianaCistrome)	0.728	0.510	7.766	0.847	0.836	890	681	62	1068	1065	753.200	; assembly_16 versus At1g70910.DAP_M0349_AthalianaCistrome (At1g70910.DAP:M0349:AthalianaCistrome); m=18/27; ncol2=7; w=0; offset=3; strand=D; shift=5; score= 753.2; -----mTCACCA ; cor=0.728; Ncor=0.510; logoDP=7.766; NsEucl=0.847; NSW=0.836; rcor=890; rNcor=681; rlogoDP=62; rNsEucl=1068; rNSW=1065; rank_mean=753.200; match_rank= a 0 0 0 0 0 19 0 0 50 0 0 50 c 0 0 0 0 0 16 0 50 0 50 50 0 g 0 0 0 0 0 3 0 0 0 0 0 0 t 0 0 0 0 0 12 50 0 0 0 0 0
DEP_UN0855.1_JASPAR_rc_shift6 (DEP:UN0855.1:JASPAR_rc)	0.821	0.493	1.951	0.857	0.878	387	740	748	1033	859	753.400	; assembly_16 versus DEP_UN0855.1_JASPAR_rc (DEP:UN0855.1:JASPAR_rc); m=19/27; ncol2=6; w=0; offset=4; strand=R; shift=6; score= 753.4; ------TCACCA ; cor=0.821; Ncor=0.493; logoDP=1.951; NsEucl=0.857; NSW=0.878; rcor=387; rNcor=740; rlogoDP=748; rNsEucl=1033; rNSW=859; rank_mean=753.400; match_rank= a 0 0 0 0 0 0 0 0 1000 0 0 1000 c 0 0 0 0 0 0 0 1000 0 1000 1000 0 g 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 1000 0 0 0 0 0
FEM111.DAP_M0491_AthalianaCistrome_rc_shift6 (FEM111.DAP:M0491:AthalianaCistrome_rc)	0.821	0.493	1.951	0.857	0.878	387	740	748	1033	859	753.400	; assembly_16 versus FEM111.DAP_M0491_AthalianaCistrome_rc (FEM111.DAP:M0491:AthalianaCistrome_rc); m=20/27; ncol2=6; w=0; offset=4; strand=R; shift=6; score= 753.4; ------TCACCA ; cor=0.821; Ncor=0.493; logoDP=1.951; NsEucl=0.857; NSW=0.878; rcor=387; rNcor=740; rlogoDP=748; rNsEucl=1033; rNSW=859; rank_mean=753.400; match_rank= a 0 0 0 0 0 0 0 0 54 0 0 54 c 0 0 0 0 0 0 0 54 0 54 54 0 g 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 54 0 0 0 0 0
BHLH113_Mo17_1_EEAD0210_EEADannot_shift1 (BHLH113_Mo17_1:EEAD0210:EEADannot)	0.709	0.473	5.949	0.888	0.875	1031	820	235	806	898	758.000	; assembly_16 versus BHLH113_Mo17_1_EEAD0210_EEADannot (BHLH113_Mo17_1:EEAD0210:EEADannot); m=21/27; ncol2=15; w=-1; offset=-1; strand=D; shift=1; score= 758; -aaymtTCAyCA ; cor=0.709; Ncor=0.473; logoDP=5.949; NsEucl=0.888; NSW=0.875; rcor=1031; rNcor=820; rlogoDP=235; rNsEucl=806; rNSW=898; rank_mean=758.000; match_rank= a 0 59 42 0 31 19 10 0 100 0 0 76 c 0 12 22 28 47 20 0 99 0 54 100 0 g 0 10 15 7 18 7 0 0 0 0 0 24 t 0 19 21 65 4 54 90 1 0 46 0 0
NAC115_Mo17_1_EEAD0464_EEADannot_rc_shift1 (NAC115_Mo17_1:EEAD0464:EEADannot_rc)	0.755	0.503	0.321	0.897	0.893	742	704	993	663	720	764.400	; assembly_16 versus NAC115_Mo17_1_EEAD0464_EEADannot_rc (NAC115_Mo17_1:EEAD0464:EEADannot_rc); m=22/27; ncol2=15; w=-1; offset=-1; strand=R; shift=1; score= 764.4; -TTGCTTCamwd ; cor=0.755; Ncor=0.503; logoDP=0.321; NsEucl=0.897; NSW=0.893; rcor=742; rNcor=704; rlogoDP=993; rNsEucl=663; rNSW=720; rank_mean=764.400; match_rank= a 0 2 2 2 0 0 0 9 53 27 30 32 c 0 1 1 2 100 0 0 75 9 49 16 11 g 0 0 0 96 0 6 0 10 20 11 16 28 t 0 97 97 0 0 94 100 6 18 13 38 29
AT2G48100_UN0843.1_JASPAR_rc_shift6 (AT2G48100:UN0843.1:JASPAR_rc)	0.810	0.486	1.946	0.856	0.876	455	769	750	1039	878	778.200	; assembly_16 versus AT2G48100_UN0843.1_JASPAR_rc (AT2G48100:UN0843.1:JASPAR_rc); m=23/27; ncol2=6; w=0; offset=4; strand=R; shift=6; score= 778.2; ------TCACCA ; cor=0.810; Ncor=0.486; logoDP=1.946; NsEucl=0.856; NSW=0.876; rcor=455; rNcor=769; rlogoDP=750; rNsEucl=1039; rNSW=878; rank_mean=778.200; match_rank= a 0 0 0 0 0 0 105 0 1000 0 0 1000 c 0 0 0 0 0 0 0 1000 0 1000 1000 0 g 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 895 0 0 0 0 0
ANAC096.DAP_M0645_AthalianaCistrome_rc_shift1 (ANAC096.DAP:M0645:AthalianaCistrome_rc)	0.728	0.455	0.242	0.895	0.890	894	871	1044	685	753	849.400	; assembly_16 versus ANAC096.DAP_M0645_AthalianaCistrome_rc (ANAC096.DAP:M0645:AthalianaCistrome_rc); m=24/27; ncol2=16; w=-1; offset=-1; strand=R; shift=1; score= 849.4; -TTrCTTswtyy ; cor=0.728; Ncor=0.455; logoDP=0.242; NsEucl=0.895; NSW=0.890; rcor=894; rNcor=871; rlogoDP=1044; rNsEucl=685; rNSW=753; rank_mean=849.400; match_rank= a 0 6 53 190 3 0 0 42 283 138 88 105 c 0 0 0 84 594 0 0 271 65 136 212 172 g 0 0 17 195 0 44 0 217 48 109 106 59 t 0 591 527 128 0 553 597 67 201 214 191 261
ANAC062.DAP_M0684_AthalianaCistrome_rc_shift2 (ANAC062.DAP:M0684:AthalianaCistrome_rc)	0.709	0.473	0.156	0.891	0.882	1027	816	1072	757	830	900.400	; assembly_16 versus ANAC062.DAP_M0684_AthalianaCistrome_rc (ANAC062.DAP:M0684:AthalianaCistrome_rc); m=25/27; ncol2=15; w=0; offset=0; strand=R; shift=2; score= 900.4; --TmCTTmatmr ; cor=0.709; Ncor=0.473; logoDP=0.156; NsEucl=0.891; NSW=0.882; rcor=1027; rNcor=816; rlogoDP=1072; rNsEucl=757; rNSW=830; rank_mean=900.400; match_rank= a 0 0 83 234 1 0 0 349 291 74 153 226 c 0 0 0 156 597 0 0 226 74 149 236 83 g 0 0 11 104 0 0 0 19 99 109 94 157 t 0 0 504 104 0 598 598 4 134 266 115 132
WRKY57_MA1089.2_JASPAR_rc_shift5 (WRKY57:MA1089.2:JASPAR_rc)	0.703	0.422	0.267	0.833	0.832	1072	999	1024	1083	1074	1050.400	; assembly_16 versus WRKY57_MA1089.2_JASPAR_rc (WRKY57:MA1089.2:JASPAR_rc); m=26/27; ncol2=6; w=0; offset=3; strand=R; shift=5; score= 1050.4; -----TTGACy- ; cor=0.703; Ncor=0.422; logoDP=0.267; NsEucl=0.833; NSW=0.832; rcor=1072; rNcor=999; rlogoDP=1024; rNsEucl=1083; rNSW=1074; rank_mean=1050.400; match_rank= a 0 0 0 0 0 56 50 27 969 75 114 0 c 0 0 0 0 0 113 23 7 0 870 312 0 g 0 0 0 0 0 14 48 914 0 17 76 0 t 0 0 0 0 0 817 879 52 30 38 499 0
WRKY18_MA1077.2_JASPAR_rc_shift5 (WRKY18:MA1077.2:JASPAR_rc)	0.705	0.423	0.054	0.823	0.812	1063	996	1087	1084	1084	1062.800	; assembly_16 versus WRKY18_MA1077.2_JASPAR_rc (WRKY18:MA1077.2:JASPAR_rc); m=27/27; ncol2=6; w=0; offset=3; strand=R; shift=5; score= 1062.8; -----TTGACy- ; cor=0.705; Ncor=0.423; logoDP=0.054; NsEucl=0.823; NSW=0.812; rcor=1063; rNcor=996; rlogoDP=1087; rNsEucl=1084; rNSW=1084; rank_mean=1062.800; match_rank= a 0 0 0 0 0 16 5 2 997 11 8 0 c 0 0 0 0 0 11 2 0 2 988 585 0 g 0 0 0 0 0 10 8 997 0 1 16 0 t 0 0 0 0 0 964 985 1 0 1 392 0

One-to-n matrix alignment; reference matrix: assembly_20_shift6 ; 28 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
assembly_20_shift6 (assembly_20)
; assembly_20; m=0 (reference); ncol1=10; shift=6; ncol=16; ------wwCTGAGAaw ; Alignment reference a 0 0 0 0 0 0 106 79 0 0 0 275 0 275 118 95 c 0 0 0 0 0 0 50 41 275 0 0 0 0 0 35 35 g 0 0 0 0 0 0 45 63 0 0 275 0 275 0 56 45 t 0 0 0 0 0 0 74 92 0 275 0 0 0 0 66 100

GRF6_MA2016.1_JASPAR_shift6 (GRF6:MA2016.1:JASPAR) 0.758 0.758 9.406 0.893 0.886 728 42 8 728 796 460.400
; assembly_20 versus GRF6_MA2016.1_JASPAR (GRF6:MA2016.1:JASPAR); m=1/27; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 460.4; ------ttCTGACAma ; cor=0.758; Ncor=0.758; logoDP=9.406; NsEucl=0.893; NSW=0.886; rcor=728; rNcor=42; rlogoDP=8; rNsEucl=728; rNSW=796; rank_mean=460.400; match_rank= a 0 0 0 0 0 0 276 205 0 0 1 1245 0 1228 391 500 c 0 0 0 0 0 0 305 146 1246 3 0 1 1245 1 398 185 g 0 0 0 0 0 0 166 54 0 3 1245 0 0 17 193 265 t 0 0 0 0 0 0 499 841 0 1240 0 0 1 0 264 296

GRF3_B73_1_m1_EEAD0385_EEADannot_shift5 (GRF3_B73_1_m1:EEAD0385:EEADannot) 0.756 0.687 8.760 0.895 0.890 737 119 14 689 760 463.800
; assembly_20 versus GRF3_B73_1_m1_EEAD0385_EEADannot (GRF3_B73_1_m1:EEAD0385:EEADannot); m=2/27; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score= 463.8; -----wmwCTGACArg ; cor=0.756; Ncor=0.687; logoDP=8.760; NsEucl=0.895; NSW=0.890; rcor=737; rNcor=119; rlogoDP=14; rNsEucl=689; rNSW=760; rank_mean=463.800; match_rank= a 0 0 0 0 0 35 26 27 1 0 0 100 0 87 34 20 c 0 0 0 0 0 18 28 20 99 0 0 0 100 0 9 22 g 0 0 0 0 0 19 22 7 0 0 100 0 0 12 33 34 t 0 0 0 0 0 28 24 46 0 100 0 0 0 1 24 24

ARF13_B73_1_m1_EEAD0179_EEADannot_shift7 (ARF13_B73_1_m1:EEAD0179:EEADannot) 0.835 0.470 9.601 0.899 0.908 326 827 3 618 549 464.600
; assembly_20 versus ARF13_B73_1_m1_EEAD0179_EEADannot (ARF13_B73_1_m1:EEAD0179:EEADannot); m=3/27; ncol2=15; w=0; offset=1; strand=D; shift=7; score= 464.6; -------yCTGAGACr ; cor=0.835; Ncor=0.470; logoDP=9.601; NsEucl=0.899; NSW=0.908; rcor=326; rNcor=827; rlogoDP=3; rNsEucl=618; rNSW=549; rank_mean=464.600; match_rank= a 0 0 0 0 0 0 0 1 2 1 6 94 0 98 0 64 c 0 0 0 0 0 0 0 62 92 2 0 2 1 0 98 0 g 0 0 0 0 0 0 0 0 0 0 94 4 99 2 0 36 t 0 0 0 0 0 0 0 37 6 97 0 0 0 0 2 0

GRF3_Mo17_1_EEAD0386_EEADannot_shift5 (GRF3_Mo17_1:EEAD0386:EEADannot) 0.752 0.684 8.620 0.895 0.889 765 127 19 704 771 477.200
; assembly_20 versus GRF3_Mo17_1_EEAD0386_EEADannot (GRF3_Mo17_1:EEAD0386:EEADannot); m=4/27; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score= 477.2; -----wchCTGACAdk ; cor=0.752; Ncor=0.684; logoDP=8.620; NsEucl=0.895; NSW=0.889; rcor=765; rNcor=127; rlogoDP=19; rNsEucl=704; rNSW=771; rank_mean=477.200; match_rank= a 0 0 0 0 0 33 23 28 0 0 0 98 0 86 31 18 c 0 0 0 0 0 21 32 25 100 0 0 2 100 2 12 22 g 0 0 0 0 0 19 22 10 0 0 100 0 0 12 32 35 t 0 0 0 0 0 27 23 37 0 100 0 0 0 0 25 25

ARF14_Mo17_1_EEAD0182_EEADannot_shift3 (ARF14_Mo17_1:EEAD0182:EEADannot) 0.786 0.605 9.575 0.891 0.882 572 326 5 758 832 498.600
; assembly_20 versus ARF14_Mo17_1_EEAD0182_EEADannot (ARF14_Mo17_1:EEAD0182:EEADannot); m=5/27; ncol2=13; w=-3; offset=-3; strand=D; shift=3; score= 498.6; ---CGCRCCTGAGACA ; cor=0.786; Ncor=0.605; logoDP=9.575; NsEucl=0.891; NSW=0.882; rcor=572; rNcor=326; rlogoDP=5; rNsEucl=758; rNSW=832; rank_mean=498.600; match_rank= a 0 0 0 0 6 0 71 1 2 1 8 92 0 99 0 88 c 0 0 0 94 0 96 0 84 93 2 0 1 0 0 99 0 g 0 0 0 0 94 1 29 0 0 1 92 7 100 1 0 12 t 0 0 0 6 0 3 0 15 5 96 0 0 0 0 1 0

ARF7_Mo17_1_EEAD0204_EEADannot_rc_shift2 (ARF7_Mo17_1:EEAD0204:EEADannot_rc) 0.819 0.546 3.307 0.903 0.906 406 549 605 530 569 531.800
; assembly_20 versus ARF7_Mo17_1_EEAD0204_EEADannot_rc (ARF7_Mo17_1:EEAD0204:EEADannot_rc); m=6/27; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score= 531.8; --TCGCryCTGAGACr ; cor=0.819; Ncor=0.546; logoDP=3.307; NsEucl=0.903; NSW=0.906; rcor=406; rNcor=549; rlogoDP=605; rNsEucl=530; rNSW=569; rank_mean=531.800; match_rank= a 0 0 0 0 6 0 51 0 2 1 6 96 0 98 0 62 c 0 0 4 95 0 98 0 63 91 2 0 0 0 0 97 0 g 0 0 0 0 94 0 49 0 0 1 94 4 99 2 0 38 t 0 0 96 5 0 2 0 37 7 96 0 0 1 0 3 0

ARF36_Mo17_1_EEAD0198_EEADannot_rc_shift2 (ARF36_Mo17_1:EEAD0198:EEADannot_rc) 0.798 0.532 3.243 0.896 0.892 507 595 616 669 728 623.000
; assembly_20 versus ARF36_Mo17_1_EEAD0198_EEADannot_rc (ARF36_Mo17_1:EEAD0198:EEADannot_rc); m=7/27; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score= 623; --TCGCrCCTGAGACA ; cor=0.798; Ncor=0.532; logoDP=3.243; NsEucl=0.896; NSW=0.892; rcor=507; rNcor=595; rlogoDP=616; rNsEucl=669; rNSW=728; rank_mean=623.000; match_rank= a 0 0 1 0 6 0 59 1 2 1 5 93 0 99 0 76 c 0 0 2 97 0 96 0 81 93 4 1 1 0 0 98 0 g 0 0 0 0 94 0 41 0 0 0 94 6 99 1 0 24 t 0 0 97 3 0 4 0 18 5 95 0 0 1 0 2 0

GRF6_MA2016.2_JASPAR_shift7 (GRF6:MA2016.2:JASPAR) 0.765 0.536 9.402 0.851 0.845 693 582 9 1057 1051 678.400
; assembly_20 versus GRF6_MA2016.2_JASPAR (GRF6:MA2016.2:JASPAR); m=8/27; ncol2=7; w=0; offset=1; strand=D; shift=7; score= 678.4; -------tCTGACA-- ; cor=0.765; Ncor=0.536; logoDP=9.402; NsEucl=0.851; NSW=0.845; rcor=693; rNcor=582; rlogoDP=9; rNsEucl=1057; rNSW=1051; rank_mean=678.400; match_rank= a 0 0 0 0 0 0 0 205 0 0 1 1245 0 1228 0 0 c 0 0 0 0 0 0 0 146 1246 3 0 1 1245 1 0 0 g 0 0 0 0 0 0 0 54 0 3 1245 0 0 17 0 0 t 0 0 0 0 0 0 0 841 0 1240 0 0 1 0 0 0

LOC_Os10g02584.3_BBRBPC_1_AT2G01930_EEAD0637_EEADannot_shift10 (LOC_Os10g02584.3_BBRBPC_1_AT2G01930:EEAD0637:EEADannot) 0.813 0.407 6.458 0.861 0.884 436 1052 198 1023 809 703.600
; assembly_20 versus LOC_Os10g02584.3_BBRBPC_1_AT2G01930_EEAD0637_EEADannot (LOC_Os10g02584.3_BBRBPC_1_AT2G01930:EEAD0637:EEADannot); m=9/27; ncol2=8; w=0; offset=4; strand=D; shift=10; score= 703.6; ----------GAGAGA ; cor=0.813; Ncor=0.407; logoDP=6.458; NsEucl=0.861; NSW=0.884; rcor=436; rNcor=1052; rlogoDP=198; rNsEucl=1023; rNSW=809; rank_mean=703.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 7 96 3 100 3 98 c 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 g 0 0 0 0 0 0 0 0 0 0 91 1 96 0 96 1 t 0 0 0 0 0 0 0 0 0 0 1 3 0 0 1 0

GRF6_B73_1_m1_EEAD0387_EEADannot_shift7 (GRF6_B73_1_m1:EEAD0387:EEADannot) 0.714 0.571 7.048 0.863 0.850 985 461 141 1013 1037 727.400
; assembly_20 versus GRF6_B73_1_m1_EEAD0387_EEADannot (GRF6_B73_1_m1:EEAD0387:EEADannot); m=10/27; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 727.4; -------tCTGACRc- ; cor=0.714; Ncor=0.571; logoDP=7.048; NsEucl=0.863; NSW=0.850; rcor=985; rNcor=461; rlogoDP=141; rNsEucl=1013; rNSW=1037; rank_mean=727.400; match_rank= a 0 0 0 0 0 0 0 24 0 0 0 72 0 73 19 0 c 0 0 0 0 0 0 0 23 100 0 0 18 100 0 39 0 g 0 0 0 0 0 0 0 15 0 0 100 5 0 25 23 0 t 0 0 0 0 0 0 0 38 0 100 0 5 0 2 19 0

GRF2_B73_1_m1_EEAD0383_EEADannot_rc_shift7 (GRF2_B73_1_m1:EEAD0383:EEADannot_rc) 0.755 0.566 2.019 0.883 0.877 749 477 744 854 872 739.200
; assembly_20 versus GRF2_B73_1_m1_EEAD0383_EEADannot_rc (GRF2_B73_1_m1:EEAD0383:EEADannot_rc); m=11/27; ncol2=11; w=0; offset=1; strand=R; shift=7; score= 739.2; -------tCTGACAdg ; cor=0.755; Ncor=0.566; logoDP=2.019; NsEucl=0.883; NSW=0.877; rcor=749; rNcor=477; rlogoDP=744; rNsEucl=854; rNSW=872; rank_mean=739.200; match_rank= a 0 0 0 0 0 0 0 22 1 0 0 100 0 86 33 19 c 0 0 0 0 0 0 0 23 99 0 0 0 100 1 8 23 g 0 0 0 0 0 0 0 6 0 0 100 0 0 13 33 34 t 0 0 0 0 0 0 0 49 0 100 0 0 0 0 26 24

SuRE_EEAD0069_EEADannot_rc_shift10 (SuRE:EEAD0069:EEADannot_rc) 0.851 0.425 1.938 0.855 0.896 256 977 754 1045 691 744.600
; assembly_20 versus SuRE_EEAD0069_EEADannot_rc (SuRE:EEAD0069:EEADannot_rc); m=12/27; ncol2=5; w=0; offset=4; strand=R; shift=10; score= 744.6; ----------GAGAC- ; cor=0.851; Ncor=0.425; logoDP=1.938; NsEucl=0.855; NSW=0.896; rcor=256; rNcor=977; rlogoDP=754; rNsEucl=1045; rNSW=691; rank_mean=744.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 g 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

GRF9_MA1756.2_JASPAR_rc_shift7 (GRF9:MA1756.2:JASPAR_rc) 0.736 0.515 6.145 0.846 0.834 844 660 223 1073 1070 774.000
; assembly_20 versus GRF9_MA1756.2_JASPAR_rc (GRF9:MA1756.2:JASPAR_rc); m=13/27; ncol2=7; w=0; offset=1; strand=R; shift=7; score= 774; -------TCTGACA-- ; cor=0.736; Ncor=0.515; logoDP=6.145; NsEucl=0.846; NSW=0.834; rcor=844; rNcor=660; rlogoDP=223; rNsEucl=1073; rNSW=1070; rank_mean=774.000; match_rank= a 0 0 0 0 0 0 0 109 0 0 98 1000 0 815 0 0 c 0 0 0 0 0 0 0 98 1000 0 0 0 1000 43 0 0 g 0 0 0 0 0 0 0 33 0 33 902 0 0 109 0 0 t 0 0 0 0 0 0 0 761 0 967 0 0 0 33 0 0

Lysine-specific_6a57_A_3D-footprint_shift7 (Lysine-specific:6a57_A:3D-footprint) 0.756 0.454 5.910 0.847 0.859 735 877 238 1069 1003 784.400
; assembly_20 versus Lysine-specific_6a57_A_3D-footprint (Lysine-specific:6a57_A:3D-footprint); m=14/27; ncol2=6; w=0; offset=1; strand=D; shift=7; score= 784.4; -------ACAGAG--- ; cor=0.756; Ncor=0.454; logoDP=5.910; NsEucl=0.847; NSW=0.859; rcor=735; rNcor=877; rlogoDP=238; rNsEucl=1069; rNSW=1003; rank_mean=784.400; match_rank= a 0 0 0 0 0 0 0 69 10 69 10 86 0 0 0 0 c 0 0 0 0 0 0 0 9 86 9 0 0 0 0 0 0 g 0 0 0 0 0 0 0 9 0 9 86 10 96 0 0 0 t 0 0 0 0 0 0 0 9 0 9 0 0 0 0 0 0

GRF9.ampDAP_M0406_AthalianaCistrome_rc_shift6 (GRF9.ampDAP:M0406:AthalianaCistrome_rc) 0.755 0.604 0.185 0.866 0.857 744 328 1068 992 1017 829.800
; assembly_20 versus GRF9.ampDAP_M0406_AthalianaCistrome_rc (GRF9.ampDAP:M0406:AthalianaCistrome_rc); m=15/27; ncol2=8; w=0; offset=0; strand=R; shift=6; score= 829.8; ------tTCTGACA-- ; cor=0.755; Ncor=0.604; logoDP=0.185; NsEucl=0.866; NSW=0.857; rcor=744; rNcor=328; rlogoDP=1068; rNsEucl=992; rNSW=1017; rank_mean=829.800; match_rank= a 0 0 0 0 0 0 132 72 4 0 1 598 0 577 0 0 c 0 0 0 0 0 0 124 66 594 0 0 0 598 4 0 0 g 0 0 0 0 0 0 75 20 0 0 597 0 0 9 0 0 t 0 0 0 0 0 0 267 440 0 598 0 0 0 8 0 0

GRF9_B73_1_m1_EEAD0391_EEADannot_rc_shift7 (GRF9_B73_1_m1:EEAD0391:EEADannot_rc) 0.734 0.587 0.372 0.866 0.856 859 399 968 997 1021 848.800
; assembly_20 versus GRF9_B73_1_m1_EEAD0391_EEADannot_rc (GRF9_B73_1_m1:EEAD0391:EEADannot_rc); m=16/27; ncol2=8; w=0; offset=1; strand=R; shift=7; score= 848.8; -------wCTGACRc- ; cor=0.734; Ncor=0.587; logoDP=0.372; NsEucl=0.866; NSW=0.856; rcor=859; rNcor=399; rlogoDP=968; rNsEucl=997; rNSW=1021; rank_mean=848.800; match_rank= a 0 0 0 0 0 0 0 26 3 0 0 96 0 73 22 0 c 0 0 0 0 0 0 0 21 97 0 0 4 100 0 39 0 g 0 0 0 0 0 0 0 10 0 0 100 0 0 27 24 0 t 0 0 0 0 0 0 0 43 0 100 0 0 0 0 15 0

GRF2_Mo17_1_EEAD0384_EEADannot_rc_shift7 (GRF2_Mo17_1:EEAD0384:EEADannot_rc) 0.761 0.456 0.101 0.884 0.880 714 864 1081 839 843 868.200
; assembly_20 versus GRF2_Mo17_1_EEAD0384_EEADannot_rc (GRF2_Mo17_1:EEAD0384:EEADannot_rc); m=17/27; ncol2=14; w=0; offset=1; strand=R; shift=7; score= 868.2; -------wCTGACArk ; cor=0.761; Ncor=0.456; logoDP=0.101; NsEucl=0.884; NSW=0.880; rcor=714; rNcor=864; rlogoDP=1081; rNsEucl=839; rNSW=843; rank_mean=868.200; match_rank= a 0 0 0 0 0 0 0 27 0 0 0 100 0 90 30 18 c 0 0 0 0 0 0 0 21 100 0 0 0 100 0 12 23 g 0 0 0 0 0 0 0 8 0 0 100 0 0 10 34 32 t 0 0 0 0 0 0 0 44 0 100 0 0 0 0 24 27

AL5G11070.t1_BBRBPC_1_AT2G01930_EEAD0593_EEADannot_rc_shift10 (AL5G11070.t1_BBRBPC_1_AT2G01930:EEAD0593:EEADannot_rc) 0.811 0.405 0.109 0.864 0.889 449 1060 1080 1008 774 874.200
; assembly_20 versus AL5G11070.t1_BBRBPC_1_AT2G01930_EEAD0593_EEADannot_rc (AL5G11070.t1_BBRBPC_1_AT2G01930:EEAD0593:EEADannot_rc); m=18/27; ncol2=8; w=0; offset=4; strand=R; shift=10; score= 874.2; ----------GAGAGA ; cor=0.811; Ncor=0.405; logoDP=0.109; NsEucl=0.864; NSW=0.889; rcor=449; rNcor=1060; rlogoDP=1080; rNsEucl=1008; rNSW=774; rank_mean=874.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 13 92 4 99 5 97 c 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 g 0 0 0 0 0 0 0 0 0 0 86 5 96 0 93 2 t 0 0 0 0 0 0 0 0 0 0 0 3 0 0 2 1

GRF9_Mo17_1_EEAD0392_EEADannot_rc_shift7 (GRF9_Mo17_1:EEAD0392:EEADannot_rc) 0.724 0.579 0.311 0.864 0.851 912 428 997 1009 1035 876.200
; assembly_20 versus GRF9_Mo17_1_EEAD0392_EEADannot_rc (GRF9_Mo17_1:EEAD0392:EEADannot_rc); m=19/27; ncol2=8; w=0; offset=1; strand=R; shift=7; score= 876.2; -------wCTGACRc- ; cor=0.724; Ncor=0.579; logoDP=0.311; NsEucl=0.864; NSW=0.851; rcor=912; rNcor=428; rlogoDP=997; rNsEucl=1009; rNSW=1035; rank_mean=876.200; match_rank= a 0 0 0 0 0 0 0 31 10 0 0 100 0 72 16 0 c 0 0 0 0 0 0 0 24 90 0 0 0 100 0 44 0 g 0 0 0 0 0 0 0 9 0 0 100 0 0 28 24 0 t 0 0 0 0 0 0 0 36 0 100 0 0 0 0 16 0

XP_013599843.1_BBRBPC_1_AT2G01930_EEAD0670_EEADannot_rc_shift10 (XP_013599843.1_BBRBPC_1_AT2G01930:EEAD0670:EEADannot_rc) 0.818 0.409 0.060 0.860 0.882 411 1045 1085 1027 825 878.600
; assembly_20 versus XP_013599843.1_BBRBPC_1_AT2G01930_EEAD0670_EEADannot_rc (XP_013599843.1_BBRBPC_1_AT2G01930:EEAD0670:EEADannot_rc); m=20/27; ncol2=8; w=0; offset=4; strand=R; shift=10; score= 878.6; ----------GAGAGA ; cor=0.818; Ncor=0.409; logoDP=0.060; NsEucl=0.860; NSW=0.882; rcor=411; rNcor=1045; rlogoDP=1085; rNsEucl=1027; rNSW=825; rank_mean=878.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 3 99 2 99 3 99 c 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 g 0 0 0 0 0 0 0 0 0 0 97 0 96 1 97 1 t 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0

GRF7_Mo17_1_EEAD0390_EEADannot_rc_shift7 (GRF7_Mo17_1:EEAD0390:EEADannot_rc) 0.714 0.571 0.580 0.863 0.849 982 460 929 1017 1043 886.200
; assembly_20 versus GRF7_Mo17_1_EEAD0390_EEADannot_rc (GRF7_Mo17_1:EEAD0390:EEADannot_rc); m=21/27; ncol2=8; w=0; offset=1; strand=R; shift=7; score= 886.2; -------tCTGACRs- ; cor=0.714; Ncor=0.571; logoDP=0.580; NsEucl=0.863; NSW=0.849; rcor=982; rNcor=460; rlogoDP=929; rNsEucl=1017; rNSW=1043; rank_mean=886.200; match_rank= a 0 0 0 0 0 0 0 23 0 0 0 78 0 71 19 0 c 0 0 0 0 0 0 0 24 100 0 0 22 100 0 38 0 g 0 0 0 0 0 0 0 13 0 0 100 0 0 29 25 0 t 0 0 0 0 0 0 0 40 0 100 0 0 0 0 18 0

AtGRF6_M1677_1.02_CISBP_shift7 (AtGRF6:M1677_1.02:CISBP) 0.704 0.563 0.998 0.851 0.824 1069 490 856 1055 1079 909.800
; assembly_20 versus AtGRF6_M1677_1.02_CISBP (AtGRF6:M1677_1.02:CISBP); m=22/27; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 909.8; -------hctGmmaa- ; cor=0.704; Ncor=0.563; logoDP=0.998; NsEucl=0.851; NSW=0.824; rcor=1069; rNcor=490; rlogoDP=856; rNsEucl=1055; rNSW=1079; rank_mean=909.800; match_rank= a 0 0 0 0 0 0 0 25 15 22 21 38 34 34 28 0 c 0 0 0 0 0 0 0 28 52 20 1 26 31 23 24 0 g 0 0 0 0 0 0 0 16 19 0 68 16 17 24 24 0 t 0 0 0 0 0 0 0 31 14 58 10 20 18 19 24 0

GRF7_B73_1_m1_EEAD0389_EEADannot_rc_shift7 (GRF7_B73_1_m1:EEAD0389:EEADannot_rc) 0.720 0.499 0.060 0.877 0.865 943 718 1084 907 969 924.200
; assembly_20 versus GRF7_B73_1_m1_EEAD0389_EEADannot_rc (GRF7_B73_1_m1:EEAD0389:EEADannot_rc); m=23/27; ncol2=12; w=0; offset=1; strand=R; shift=7; score= 924.2; -------tCTGACRcr ; cor=0.720; Ncor=0.499; logoDP=0.060; NsEucl=0.877; NSW=0.865; rcor=943; rNcor=718; rlogoDP=1084; rNsEucl=907; rNSW=969; rank_mean=924.200; match_rank= a 0 0 0 0 0 0 0 18 0 0 0 91 0 69 22 31 c 0 0 0 0 0 0 0 22 100 0 0 8 100 0 38 22 g 0 0 0 0 0 0 0 7 0 0 100 0 0 31 22 25 t 0 0 0 0 0 0 0 53 0 100 0 1 0 0 18 22

AtGRF6.DAP_M0405_AthalianaCistrome_rc_shift7 (AtGRF6.DAP:M0405:AthalianaCistrome_rc) 0.730 0.438 0.152 0.876 0.861 879 932 1074 936 996 963.400
; assembly_20 versus AtGRF6.DAP_M0405_AthalianaCistrome_rc (AtGRF6.DAP:M0405:AthalianaCistrome_rc); m=24/27; ncol2=14; w=0; offset=1; strand=R; shift=7; score= 963.4; -------TCTGACAmw ; cor=0.730; Ncor=0.438; logoDP=0.152; NsEucl=0.876; NSW=0.861; rcor=879; rNcor=932; rlogoDP=1074; rNsEucl=936; rNSW=996; rank_mean=963.400; match_rank= a 0 0 0 0 0 0 0 68 1 1 0 592 0 482 164 255 c 0 0 0 0 0 0 0 48 595 0 0 2 593 0 251 74 g 0 0 0 0 0 0 0 1 0 0 595 0 1 111 75 117 t 0 0 0 0 0 0 0 479 0 595 1 2 2 3 106 150

GRF9.DAP_M0407_AthalianaCistrome_rc_shift0 (GRF9.DAP:M0407:AthalianaCistrome_rc) 0.730 0.411 0.151 0.877 0.864 880 1037 1075 911 976 975.800
; assembly_20 versus GRF9.DAP_M0407_AthalianaCistrome_rc (GRF9.DAP:M0407:AthalianaCistrome_rc); m=25/27; ncol2=15; w=-6; offset=-6; strand=R; shift=0; score= 975.8; tgwrwytTCTGACAa- ; cor=0.730; Ncor=0.411; logoDP=0.151; NsEucl=0.877; NSW=0.864; rcor=880; rNcor=1037; rlogoDP=1075; rNsEucl=911; rNSW=976; rank_mean=975.800; match_rank= a 17 10 31 35 24 21 14 10 0 0 9 92 0 75 48 0 c 11 22 12 22 11 28 19 9 92 0 0 0 92 4 17 0 g 20 38 15 23 15 12 15 3 0 3 83 0 0 10 12 0 t 44 22 34 12 42 31 44 70 0 89 0 0 0 3 15 0

GRF9_MA1756.1_JASPAR_rc_shift0 (GRF9:MA1756.1:JASPAR_rc) 0.730 0.411 0.151 0.877 0.864 881 1038 1076 912 977 976.800
; assembly_20 versus GRF9_MA1756.1_JASPAR_rc (GRF9:MA1756.1:JASPAR_rc); m=26/27; ncol2=15; w=-6; offset=-6; strand=R; shift=0; score= 976.8; tgwrwytTCTGACAa- ; cor=0.730; Ncor=0.411; logoDP=0.151; NsEucl=0.877; NSW=0.864; rcor=881; rNcor=1038; rlogoDP=1076; rNsEucl=912; rNSW=977; rank_mean=976.800; match_rank= a 185 109 337 380 260.87 228 152 109 0 0 97.826 1000 0 815 522 0 c 120 239.13 130 239.13 120 304 207 97.826 1000 0 0 0 1000 43.478 185 0 g 217 413 163 250 163 130 163 32.609 0 32.609 902 0 0 109 130 0 t 478 239.13 370 130 457 337 478 760.87 0 967 0 0 0 32.609 163 0

GRF6_Mo17_1_EEAD0388_EEADannot_rc_shift8 (GRF6_Mo17_1:EEAD0388:EEADannot_rc) 0.722 0.433 0.608 0.821 0.808 925 946 923 1085 1085 992.800
; assembly_20 versus GRF6_Mo17_1_EEAD0388_EEADannot_rc (GRF6_Mo17_1:EEAD0388:EEADannot_rc); m=27/27; ncol2=6; w=0; offset=2; strand=R; shift=8; score= 992.8; --------CTGMCR-- ; cor=0.722; Ncor=0.433; logoDP=0.608; NsEucl=0.821; NSW=0.808; rcor=925; rNcor=946; rlogoDP=923; rNsEucl=1085; rNSW=1085; rank_mean=992.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 70 0 75 0 0 c 0 0 0 0 0 0 0 0 100 0 0 30 100 0 0 0 g 0 0 0 0 0 0 0 0 0 0 100 0 0 25 0 0 t 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	Aligned matrices
assembly_20_shift6 (assembly_20)												; assembly_20; m=0 (reference); ncol1=10; shift=6; ncol=16; ------wwCTGAGAaw ; Alignment reference a 0 0 0 0 0 0 106 79 0 0 0 275 0 275 118 95 c 0 0 0 0 0 0 50 41 275 0 0 0 0 0 35 35 g 0 0 0 0 0 0 45 63 0 0 275 0 275 0 56 45 t 0 0 0 0 0 0 74 92 0 275 0 0 0 0 66 100
GRF6_MA2016.1_JASPAR_shift6 (GRF6:MA2016.1:JASPAR)	0.758	0.758	9.406	0.893	0.886	728	42	8	728	796	460.400	; assembly_20 versus GRF6_MA2016.1_JASPAR (GRF6:MA2016.1:JASPAR); m=1/27; ncol2=10; w=0; offset=0; strand=D; shift=6; score= 460.4; ------ttCTGACAma ; cor=0.758; Ncor=0.758; logoDP=9.406; NsEucl=0.893; NSW=0.886; rcor=728; rNcor=42; rlogoDP=8; rNsEucl=728; rNSW=796; rank_mean=460.400; match_rank= a 0 0 0 0 0 0 276 205 0 0 1 1245 0 1228 391 500 c 0 0 0 0 0 0 305 146 1246 3 0 1 1245 1 398 185 g 0 0 0 0 0 0 166 54 0 3 1245 0 0 17 193 265 t 0 0 0 0 0 0 499 841 0 1240 0 0 1 0 264 296
GRF3_B73_1_m1_EEAD0385_EEADannot_shift5 (GRF3_B73_1_m1:EEAD0385:EEADannot)	0.756	0.687	8.760	0.895	0.890	737	119	14	689	760	463.800	; assembly_20 versus GRF3_B73_1_m1_EEAD0385_EEADannot (GRF3_B73_1_m1:EEAD0385:EEADannot); m=2/27; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score= 463.8; -----wmwCTGACArg ; cor=0.756; Ncor=0.687; logoDP=8.760; NsEucl=0.895; NSW=0.890; rcor=737; rNcor=119; rlogoDP=14; rNsEucl=689; rNSW=760; rank_mean=463.800; match_rank= a 0 0 0 0 0 35 26 27 1 0 0 100 0 87 34 20 c 0 0 0 0 0 18 28 20 99 0 0 0 100 0 9 22 g 0 0 0 0 0 19 22 7 0 0 100 0 0 12 33 34 t 0 0 0 0 0 28 24 46 0 100 0 0 0 1 24 24
ARF13_B73_1_m1_EEAD0179_EEADannot_shift7 (ARF13_B73_1_m1:EEAD0179:EEADannot)	0.835	0.470	9.601	0.899	0.908	326	827	3	618	549	464.600	; assembly_20 versus ARF13_B73_1_m1_EEAD0179_EEADannot (ARF13_B73_1_m1:EEAD0179:EEADannot); m=3/27; ncol2=15; w=0; offset=1; strand=D; shift=7; score= 464.6; -------yCTGAGACr ; cor=0.835; Ncor=0.470; logoDP=9.601; NsEucl=0.899; NSW=0.908; rcor=326; rNcor=827; rlogoDP=3; rNsEucl=618; rNSW=549; rank_mean=464.600; match_rank= a 0 0 0 0 0 0 0 1 2 1 6 94 0 98 0 64 c 0 0 0 0 0 0 0 62 92 2 0 2 1 0 98 0 g 0 0 0 0 0 0 0 0 0 0 94 4 99 2 0 36 t 0 0 0 0 0 0 0 37 6 97 0 0 0 0 2 0
GRF3_Mo17_1_EEAD0386_EEADannot_shift5 (GRF3_Mo17_1:EEAD0386:EEADannot)	0.752	0.684	8.620	0.895	0.889	765	127	19	704	771	477.200	; assembly_20 versus GRF3_Mo17_1_EEAD0386_EEADannot (GRF3_Mo17_1:EEAD0386:EEADannot); m=4/27; ncol2=11; w=-1; offset=-1; strand=D; shift=5; score= 477.2; -----wchCTGACAdk ; cor=0.752; Ncor=0.684; logoDP=8.620; NsEucl=0.895; NSW=0.889; rcor=765; rNcor=127; rlogoDP=19; rNsEucl=704; rNSW=771; rank_mean=477.200; match_rank= a 0 0 0 0 0 33 23 28 0 0 0 98 0 86 31 18 c 0 0 0 0 0 21 32 25 100 0 0 2 100 2 12 22 g 0 0 0 0 0 19 22 10 0 0 100 0 0 12 32 35 t 0 0 0 0 0 27 23 37 0 100 0 0 0 0 25 25
ARF14_Mo17_1_EEAD0182_EEADannot_shift3 (ARF14_Mo17_1:EEAD0182:EEADannot)	0.786	0.605	9.575	0.891	0.882	572	326	5	758	832	498.600	; assembly_20 versus ARF14_Mo17_1_EEAD0182_EEADannot (ARF14_Mo17_1:EEAD0182:EEADannot); m=5/27; ncol2=13; w=-3; offset=-3; strand=D; shift=3; score= 498.6; ---CGCRCCTGAGACA ; cor=0.786; Ncor=0.605; logoDP=9.575; NsEucl=0.891; NSW=0.882; rcor=572; rNcor=326; rlogoDP=5; rNsEucl=758; rNSW=832; rank_mean=498.600; match_rank= a 0 0 0 0 6 0 71 1 2 1 8 92 0 99 0 88 c 0 0 0 94 0 96 0 84 93 2 0 1 0 0 99 0 g 0 0 0 0 94 1 29 0 0 1 92 7 100 1 0 12 t 0 0 0 6 0 3 0 15 5 96 0 0 0 0 1 0
ARF7_Mo17_1_EEAD0204_EEADannot_rc_shift2 (ARF7_Mo17_1:EEAD0204:EEADannot_rc)	0.819	0.546	3.307	0.903	0.906	406	549	605	530	569	531.800	; assembly_20 versus ARF7_Mo17_1_EEAD0204_EEADannot_rc (ARF7_Mo17_1:EEAD0204:EEADannot_rc); m=6/27; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score= 531.8; --TCGCryCTGAGACr ; cor=0.819; Ncor=0.546; logoDP=3.307; NsEucl=0.903; NSW=0.906; rcor=406; rNcor=549; rlogoDP=605; rNsEucl=530; rNSW=569; rank_mean=531.800; match_rank= a 0 0 0 0 6 0 51 0 2 1 6 96 0 98 0 62 c 0 0 4 95 0 98 0 63 91 2 0 0 0 0 97 0 g 0 0 0 0 94 0 49 0 0 1 94 4 99 2 0 38 t 0 0 96 5 0 2 0 37 7 96 0 0 1 0 3 0
ARF36_Mo17_1_EEAD0198_EEADannot_rc_shift2 (ARF36_Mo17_1:EEAD0198:EEADannot_rc)	0.798	0.532	3.243	0.896	0.892	507	595	616	669	728	623.000	; assembly_20 versus ARF36_Mo17_1_EEAD0198_EEADannot_rc (ARF36_Mo17_1:EEAD0198:EEADannot_rc); m=7/27; ncol2=15; w=-4; offset=-4; strand=R; shift=2; score= 623; --TCGCrCCTGAGACA ; cor=0.798; Ncor=0.532; logoDP=3.243; NsEucl=0.896; NSW=0.892; rcor=507; rNcor=595; rlogoDP=616; rNsEucl=669; rNSW=728; rank_mean=623.000; match_rank= a 0 0 1 0 6 0 59 1 2 1 5 93 0 99 0 76 c 0 0 2 97 0 96 0 81 93 4 1 1 0 0 98 0 g 0 0 0 0 94 0 41 0 0 0 94 6 99 1 0 24 t 0 0 97 3 0 4 0 18 5 95 0 0 1 0 2 0
GRF6_MA2016.2_JASPAR_shift7 (GRF6:MA2016.2:JASPAR)	0.765	0.536	9.402	0.851	0.845	693	582	9	1057	1051	678.400	; assembly_20 versus GRF6_MA2016.2_JASPAR (GRF6:MA2016.2:JASPAR); m=8/27; ncol2=7; w=0; offset=1; strand=D; shift=7; score= 678.4; -------tCTGACA-- ; cor=0.765; Ncor=0.536; logoDP=9.402; NsEucl=0.851; NSW=0.845; rcor=693; rNcor=582; rlogoDP=9; rNsEucl=1057; rNSW=1051; rank_mean=678.400; match_rank= a 0 0 0 0 0 0 0 205 0 0 1 1245 0 1228 0 0 c 0 0 0 0 0 0 0 146 1246 3 0 1 1245 1 0 0 g 0 0 0 0 0 0 0 54 0 3 1245 0 0 17 0 0 t 0 0 0 0 0 0 0 841 0 1240 0 0 1 0 0 0
LOC_Os10g02584.3_BBRBPC_1_AT2G01930_EEAD0637_EEADannot_shift10 (LOC_Os10g02584.3_BBRBPC_1_AT2G01930:EEAD0637:EEADannot)	0.813	0.407	6.458	0.861	0.884	436	1052	198	1023	809	703.600	; assembly_20 versus LOC_Os10g02584.3_BBRBPC_1_AT2G01930_EEAD0637_EEADannot (LOC_Os10g02584.3_BBRBPC_1_AT2G01930:EEAD0637:EEADannot); m=9/27; ncol2=8; w=0; offset=4; strand=D; shift=10; score= 703.6; ----------GAGAGA ; cor=0.813; Ncor=0.407; logoDP=6.458; NsEucl=0.861; NSW=0.884; rcor=436; rNcor=1052; rlogoDP=198; rNsEucl=1023; rNSW=809; rank_mean=703.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 7 96 3 100 3 98 c 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 g 0 0 0 0 0 0 0 0 0 0 91 1 96 0 96 1 t 0 0 0 0 0 0 0 0 0 0 1 3 0 0 1 0
GRF6_B73_1_m1_EEAD0387_EEADannot_shift7 (GRF6_B73_1_m1:EEAD0387:EEADannot)	0.714	0.571	7.048	0.863	0.850	985	461	141	1013	1037	727.400	; assembly_20 versus GRF6_B73_1_m1_EEAD0387_EEADannot (GRF6_B73_1_m1:EEAD0387:EEADannot); m=10/27; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 727.4; -------tCTGACRc- ; cor=0.714; Ncor=0.571; logoDP=7.048; NsEucl=0.863; NSW=0.850; rcor=985; rNcor=461; rlogoDP=141; rNsEucl=1013; rNSW=1037; rank_mean=727.400; match_rank= a 0 0 0 0 0 0 0 24 0 0 0 72 0 73 19 0 c 0 0 0 0 0 0 0 23 100 0 0 18 100 0 39 0 g 0 0 0 0 0 0 0 15 0 0 100 5 0 25 23 0 t 0 0 0 0 0 0 0 38 0 100 0 5 0 2 19 0
GRF2_B73_1_m1_EEAD0383_EEADannot_rc_shift7 (GRF2_B73_1_m1:EEAD0383:EEADannot_rc)	0.755	0.566	2.019	0.883	0.877	749	477	744	854	872	739.200	; assembly_20 versus GRF2_B73_1_m1_EEAD0383_EEADannot_rc (GRF2_B73_1_m1:EEAD0383:EEADannot_rc); m=11/27; ncol2=11; w=0; offset=1; strand=R; shift=7; score= 739.2; -------tCTGACAdg ; cor=0.755; Ncor=0.566; logoDP=2.019; NsEucl=0.883; NSW=0.877; rcor=749; rNcor=477; rlogoDP=744; rNsEucl=854; rNSW=872; rank_mean=739.200; match_rank= a 0 0 0 0 0 0 0 22 1 0 0 100 0 86 33 19 c 0 0 0 0 0 0 0 23 99 0 0 0 100 1 8 23 g 0 0 0 0 0 0 0 6 0 0 100 0 0 13 33 34 t 0 0 0 0 0 0 0 49 0 100 0 0 0 0 26 24
SuRE_EEAD0069_EEADannot_rc_shift10 (SuRE:EEAD0069:EEADannot_rc)	0.851	0.425	1.938	0.855	0.896	256	977	754	1045	691	744.600	; assembly_20 versus SuRE_EEAD0069_EEADannot_rc (SuRE:EEAD0069:EEADannot_rc); m=12/27; ncol2=5; w=0; offset=4; strand=R; shift=10; score= 744.6; ----------GAGAC- ; cor=0.851; Ncor=0.425; logoDP=1.938; NsEucl=0.855; NSW=0.896; rcor=256; rNcor=977; rlogoDP=754; rNsEucl=1045; rNSW=691; rank_mean=744.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 g 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GRF9_MA1756.2_JASPAR_rc_shift7 (GRF9:MA1756.2:JASPAR_rc)	0.736	0.515	6.145	0.846	0.834	844	660	223	1073	1070	774.000	; assembly_20 versus GRF9_MA1756.2_JASPAR_rc (GRF9:MA1756.2:JASPAR_rc); m=13/27; ncol2=7; w=0; offset=1; strand=R; shift=7; score= 774; -------TCTGACA-- ; cor=0.736; Ncor=0.515; logoDP=6.145; NsEucl=0.846; NSW=0.834; rcor=844; rNcor=660; rlogoDP=223; rNsEucl=1073; rNSW=1070; rank_mean=774.000; match_rank= a 0 0 0 0 0 0 0 109 0 0 98 1000 0 815 0 0 c 0 0 0 0 0 0 0 98 1000 0 0 0 1000 43 0 0 g 0 0 0 0 0 0 0 33 0 33 902 0 0 109 0 0 t 0 0 0 0 0 0 0 761 0 967 0 0 0 33 0 0
Lysine-specific_6a57_A_3D-footprint_shift7 (Lysine-specific:6a57_A:3D-footprint)	0.756	0.454	5.910	0.847	0.859	735	877	238	1069	1003	784.400	; assembly_20 versus Lysine-specific_6a57_A_3D-footprint (Lysine-specific:6a57_A:3D-footprint); m=14/27; ncol2=6; w=0; offset=1; strand=D; shift=7; score= 784.4; -------ACAGAG--- ; cor=0.756; Ncor=0.454; logoDP=5.910; NsEucl=0.847; NSW=0.859; rcor=735; rNcor=877; rlogoDP=238; rNsEucl=1069; rNSW=1003; rank_mean=784.400; match_rank= a 0 0 0 0 0 0 0 69 10 69 10 86 0 0 0 0 c 0 0 0 0 0 0 0 9 86 9 0 0 0 0 0 0 g 0 0 0 0 0 0 0 9 0 9 86 10 96 0 0 0 t 0 0 0 0 0 0 0 9 0 9 0 0 0 0 0 0
GRF9.ampDAP_M0406_AthalianaCistrome_rc_shift6 (GRF9.ampDAP:M0406:AthalianaCistrome_rc)	0.755	0.604	0.185	0.866	0.857	744	328	1068	992	1017	829.800	; assembly_20 versus GRF9.ampDAP_M0406_AthalianaCistrome_rc (GRF9.ampDAP:M0406:AthalianaCistrome_rc); m=15/27; ncol2=8; w=0; offset=0; strand=R; shift=6; score= 829.8; ------tTCTGACA-- ; cor=0.755; Ncor=0.604; logoDP=0.185; NsEucl=0.866; NSW=0.857; rcor=744; rNcor=328; rlogoDP=1068; rNsEucl=992; rNSW=1017; rank_mean=829.800; match_rank= a 0 0 0 0 0 0 132 72 4 0 1 598 0 577 0 0 c 0 0 0 0 0 0 124 66 594 0 0 0 598 4 0 0 g 0 0 0 0 0 0 75 20 0 0 597 0 0 9 0 0 t 0 0 0 0 0 0 267 440 0 598 0 0 0 8 0 0
GRF9_B73_1_m1_EEAD0391_EEADannot_rc_shift7 (GRF9_B73_1_m1:EEAD0391:EEADannot_rc)	0.734	0.587	0.372	0.866	0.856	859	399	968	997	1021	848.800	; assembly_20 versus GRF9_B73_1_m1_EEAD0391_EEADannot_rc (GRF9_B73_1_m1:EEAD0391:EEADannot_rc); m=16/27; ncol2=8; w=0; offset=1; strand=R; shift=7; score= 848.8; -------wCTGACRc- ; cor=0.734; Ncor=0.587; logoDP=0.372; NsEucl=0.866; NSW=0.856; rcor=859; rNcor=399; rlogoDP=968; rNsEucl=997; rNSW=1021; rank_mean=848.800; match_rank= a 0 0 0 0 0 0 0 26 3 0 0 96 0 73 22 0 c 0 0 0 0 0 0 0 21 97 0 0 4 100 0 39 0 g 0 0 0 0 0 0 0 10 0 0 100 0 0 27 24 0 t 0 0 0 0 0 0 0 43 0 100 0 0 0 0 15 0
GRF2_Mo17_1_EEAD0384_EEADannot_rc_shift7 (GRF2_Mo17_1:EEAD0384:EEADannot_rc)	0.761	0.456	0.101	0.884	0.880	714	864	1081	839	843	868.200	; assembly_20 versus GRF2_Mo17_1_EEAD0384_EEADannot_rc (GRF2_Mo17_1:EEAD0384:EEADannot_rc); m=17/27; ncol2=14; w=0; offset=1; strand=R; shift=7; score= 868.2; -------wCTGACArk ; cor=0.761; Ncor=0.456; logoDP=0.101; NsEucl=0.884; NSW=0.880; rcor=714; rNcor=864; rlogoDP=1081; rNsEucl=839; rNSW=843; rank_mean=868.200; match_rank= a 0 0 0 0 0 0 0 27 0 0 0 100 0 90 30 18 c 0 0 0 0 0 0 0 21 100 0 0 0 100 0 12 23 g 0 0 0 0 0 0 0 8 0 0 100 0 0 10 34 32 t 0 0 0 0 0 0 0 44 0 100 0 0 0 0 24 27
AL5G11070.t1_BBRBPC_1_AT2G01930_EEAD0593_EEADannot_rc_shift10 (AL5G11070.t1_BBRBPC_1_AT2G01930:EEAD0593:EEADannot_rc)	0.811	0.405	0.109	0.864	0.889	449	1060	1080	1008	774	874.200	; assembly_20 versus AL5G11070.t1_BBRBPC_1_AT2G01930_EEAD0593_EEADannot_rc (AL5G11070.t1_BBRBPC_1_AT2G01930:EEAD0593:EEADannot_rc); m=18/27; ncol2=8; w=0; offset=4; strand=R; shift=10; score= 874.2; ----------GAGAGA ; cor=0.811; Ncor=0.405; logoDP=0.109; NsEucl=0.864; NSW=0.889; rcor=449; rNcor=1060; rlogoDP=1080; rNsEucl=1008; rNSW=774; rank_mean=874.200; match_rank= a 0 0 0 0 0 0 0 0 0 0 13 92 4 99 5 97 c 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 g 0 0 0 0 0 0 0 0 0 0 86 5 96 0 93 2 t 0 0 0 0 0 0 0 0 0 0 0 3 0 0 2 1
GRF9_Mo17_1_EEAD0392_EEADannot_rc_shift7 (GRF9_Mo17_1:EEAD0392:EEADannot_rc)	0.724	0.579	0.311	0.864	0.851	912	428	997	1009	1035	876.200	; assembly_20 versus GRF9_Mo17_1_EEAD0392_EEADannot_rc (GRF9_Mo17_1:EEAD0392:EEADannot_rc); m=19/27; ncol2=8; w=0; offset=1; strand=R; shift=7; score= 876.2; -------wCTGACRc- ; cor=0.724; Ncor=0.579; logoDP=0.311; NsEucl=0.864; NSW=0.851; rcor=912; rNcor=428; rlogoDP=997; rNsEucl=1009; rNSW=1035; rank_mean=876.200; match_rank= a 0 0 0 0 0 0 0 31 10 0 0 100 0 72 16 0 c 0 0 0 0 0 0 0 24 90 0 0 0 100 0 44 0 g 0 0 0 0 0 0 0 9 0 0 100 0 0 28 24 0 t 0 0 0 0 0 0 0 36 0 100 0 0 0 0 16 0
XP_013599843.1_BBRBPC_1_AT2G01930_EEAD0670_EEADannot_rc_shift10 (XP_013599843.1_BBRBPC_1_AT2G01930:EEAD0670:EEADannot_rc)	0.818	0.409	0.060	0.860	0.882	411	1045	1085	1027	825	878.600	; assembly_20 versus XP_013599843.1_BBRBPC_1_AT2G01930_EEAD0670_EEADannot_rc (XP_013599843.1_BBRBPC_1_AT2G01930:EEAD0670:EEADannot_rc); m=20/27; ncol2=8; w=0; offset=4; strand=R; shift=10; score= 878.6; ----------GAGAGA ; cor=0.818; Ncor=0.409; logoDP=0.060; NsEucl=0.860; NSW=0.882; rcor=411; rNcor=1045; rlogoDP=1085; rNsEucl=1027; rNSW=825; rank_mean=878.600; match_rank= a 0 0 0 0 0 0 0 0 0 0 3 99 2 99 3 99 c 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 g 0 0 0 0 0 0 0 0 0 0 97 0 96 1 97 1 t 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0
GRF7_Mo17_1_EEAD0390_EEADannot_rc_shift7 (GRF7_Mo17_1:EEAD0390:EEADannot_rc)	0.714	0.571	0.580	0.863	0.849	982	460	929	1017	1043	886.200	; assembly_20 versus GRF7_Mo17_1_EEAD0390_EEADannot_rc (GRF7_Mo17_1:EEAD0390:EEADannot_rc); m=21/27; ncol2=8; w=0; offset=1; strand=R; shift=7; score= 886.2; -------tCTGACRs- ; cor=0.714; Ncor=0.571; logoDP=0.580; NsEucl=0.863; NSW=0.849; rcor=982; rNcor=460; rlogoDP=929; rNsEucl=1017; rNSW=1043; rank_mean=886.200; match_rank= a 0 0 0 0 0 0 0 23 0 0 0 78 0 71 19 0 c 0 0 0 0 0 0 0 24 100 0 0 22 100 0 38 0 g 0 0 0 0 0 0 0 13 0 0 100 0 0 29 25 0 t 0 0 0 0 0 0 0 40 0 100 0 0 0 0 18 0
AtGRF6_M1677_1.02_CISBP_shift7 (AtGRF6:M1677_1.02:CISBP)	0.704	0.563	0.998	0.851	0.824	1069	490	856	1055	1079	909.800	; assembly_20 versus AtGRF6_M1677_1.02_CISBP (AtGRF6:M1677_1.02:CISBP); m=22/27; ncol2=8; w=0; offset=1; strand=D; shift=7; score= 909.8; -------hctGmmaa- ; cor=0.704; Ncor=0.563; logoDP=0.998; NsEucl=0.851; NSW=0.824; rcor=1069; rNcor=490; rlogoDP=856; rNsEucl=1055; rNSW=1079; rank_mean=909.800; match_rank= a 0 0 0 0 0 0 0 25 15 22 21 38 34 34 28 0 c 0 0 0 0 0 0 0 28 52 20 1 26 31 23 24 0 g 0 0 0 0 0 0 0 16 19 0 68 16 17 24 24 0 t 0 0 0 0 0 0 0 31 14 58 10 20 18 19 24 0
GRF7_B73_1_m1_EEAD0389_EEADannot_rc_shift7 (GRF7_B73_1_m1:EEAD0389:EEADannot_rc)	0.720	0.499	0.060	0.877	0.865	943	718	1084	907	969	924.200	; assembly_20 versus GRF7_B73_1_m1_EEAD0389_EEADannot_rc (GRF7_B73_1_m1:EEAD0389:EEADannot_rc); m=23/27; ncol2=12; w=0; offset=1; strand=R; shift=7; score= 924.2; -------tCTGACRcr ; cor=0.720; Ncor=0.499; logoDP=0.060; NsEucl=0.877; NSW=0.865; rcor=943; rNcor=718; rlogoDP=1084; rNsEucl=907; rNSW=969; rank_mean=924.200; match_rank= a 0 0 0 0 0 0 0 18 0 0 0 91 0 69 22 31 c 0 0 0 0 0 0 0 22 100 0 0 8 100 0 38 22 g 0 0 0 0 0 0 0 7 0 0 100 0 0 31 22 25 t 0 0 0 0 0 0 0 53 0 100 0 1 0 0 18 22
AtGRF6.DAP_M0405_AthalianaCistrome_rc_shift7 (AtGRF6.DAP:M0405:AthalianaCistrome_rc)	0.730	0.438	0.152	0.876	0.861	879	932	1074	936	996	963.400	; assembly_20 versus AtGRF6.DAP_M0405_AthalianaCistrome_rc (AtGRF6.DAP:M0405:AthalianaCistrome_rc); m=24/27; ncol2=14; w=0; offset=1; strand=R; shift=7; score= 963.4; -------TCTGACAmw ; cor=0.730; Ncor=0.438; logoDP=0.152; NsEucl=0.876; NSW=0.861; rcor=879; rNcor=932; rlogoDP=1074; rNsEucl=936; rNSW=996; rank_mean=963.400; match_rank= a 0 0 0 0 0 0 0 68 1 1 0 592 0 482 164 255 c 0 0 0 0 0 0 0 48 595 0 0 2 593 0 251 74 g 0 0 0 0 0 0 0 1 0 0 595 0 1 111 75 117 t 0 0 0 0 0 0 0 479 0 595 1 2 2 3 106 150
GRF9.DAP_M0407_AthalianaCistrome_rc_shift0 (GRF9.DAP:M0407:AthalianaCistrome_rc)	0.730	0.411	0.151	0.877	0.864	880	1037	1075	911	976	975.800	; assembly_20 versus GRF9.DAP_M0407_AthalianaCistrome_rc (GRF9.DAP:M0407:AthalianaCistrome_rc); m=25/27; ncol2=15; w=-6; offset=-6; strand=R; shift=0; score= 975.8; tgwrwytTCTGACAa- ; cor=0.730; Ncor=0.411; logoDP=0.151; NsEucl=0.877; NSW=0.864; rcor=880; rNcor=1037; rlogoDP=1075; rNsEucl=911; rNSW=976; rank_mean=975.800; match_rank= a 17 10 31 35 24 21 14 10 0 0 9 92 0 75 48 0 c 11 22 12 22 11 28 19 9 92 0 0 0 92 4 17 0 g 20 38 15 23 15 12 15 3 0 3 83 0 0 10 12 0 t 44 22 34 12 42 31 44 70 0 89 0 0 0 3 15 0
GRF9_MA1756.1_JASPAR_rc_shift0 (GRF9:MA1756.1:JASPAR_rc)	0.730	0.411	0.151	0.877	0.864	881	1038	1076	912	977	976.800	; assembly_20 versus GRF9_MA1756.1_JASPAR_rc (GRF9:MA1756.1:JASPAR_rc); m=26/27; ncol2=15; w=-6; offset=-6; strand=R; shift=0; score= 976.8; tgwrwytTCTGACAa- ; cor=0.730; Ncor=0.411; logoDP=0.151; NsEucl=0.877; NSW=0.864; rcor=881; rNcor=1038; rlogoDP=1076; rNsEucl=912; rNSW=977; rank_mean=976.800; match_rank= a 185 109 337 380 260.87 228 152 109 0 0 97.826 1000 0 815 522 0 c 120 239.13 130 239.13 120 304 207 97.826 1000 0 0 0 1000 43.478 185 0 g 217 413 163 250 163 130 163 32.609 0 32.609 902 0 0 109 130 0 t 478 239.13 370 130 457 337 478 760.87 0 967 0 0 0 32.609 163 0
GRF6_Mo17_1_EEAD0388_EEADannot_rc_shift8 (GRF6_Mo17_1:EEAD0388:EEADannot_rc)	0.722	0.433	0.608	0.821	0.808	925	946	923	1085	1085	992.800	; assembly_20 versus GRF6_Mo17_1_EEAD0388_EEADannot_rc (GRF6_Mo17_1:EEAD0388:EEADannot_rc); m=27/27; ncol2=6; w=0; offset=2; strand=R; shift=8; score= 992.8; --------CTGMCR-- ; cor=0.722; Ncor=0.433; logoDP=0.608; NsEucl=0.821; NSW=0.808; rcor=925; rNcor=946; rlogoDP=923; rNsEucl=1085; rNSW=1085; rank_mean=992.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 70 0 75 0 0 c 0 0 0 0 0 0 0 0 100 0 0 30 100 0 0 0 g 0 0 0 0 0 0 0 0 0 0 100 0 0 25 0 0 t 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0

One-to-n matrix alignment; reference matrix: assembly_2_shift0 ; 6 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
assembly_2_shift0 (assembly_2)
; assembly_2; m=0 (reference); ncol1=18; shift=0; ncol=18; armmGrAGAAGAAGmrra ; Alignment reference a 187 129 149 144 73 146 391 20 404 410 34 408 401 51 193 151 155 171 c 75 55 132 169 13 16 10 12 10 5 7 6 7 17 141 42 42 81 g 68 154 66 46 310 240 12 397 16 11 388 14 13 351 46 167 135 90 t 106 98 89 77 40 34 23 7 6 10 7 8 15 17 56 76 104 94

TGA5_2_EEAD0137_EEADannot_shift3 (TGA5_2:EEAD0137:EEADannot) 0.728 0.607 4.608 0.921 0.907 893 318 437 205 559 482.400
; assembly_2 versus TGA5_2_EEAD0137_EEADannot (TGA5_2:EEAD0137:EEADannot); m=1/5; ncol2=15; w=0; offset=3; strand=D; shift=3; score= 482.4; ---tGrwGawGRwGAwGa ; cor=0.728; Ncor=0.607; logoDP=4.608; NsEucl=0.921; NSW=0.907; rcor=893; rNcor=318; rlogoDP=437; rNsEucl=205; rNSW=559; rank_mean=482.400; match_rank= a 0 0 0 32 11 110 84 3 137 60 0 146 72 0 148 93 41 118 c 0 0 0 47 1 12 18 0 6 47 0 0 29 0 9 30 0 38 g 0 0 0 18 188 70 26 201 38 15 204 53 19 204 47 13 163 40 t 0 0 0 107 4 12 76 0 23 82 0 5 84 0 0 68 0 8

AT5G18090.DAP_M0009_AthalianaCistrome_shift4 (AT5G18090.DAP:M0009:AthalianaCistrome) 0.704 0.519 6.541 0.913 0.894 1070 649 193 329 706 589.400
; assembly_2 versus AT5G18090.DAP_M0009_AthalianaCistrome (AT5G18090.DAP:M0009:AthalianaCistrome); m=2/5; ncol2=15; w=0; offset=4; strand=D; shift=4; score= 589.4; ----gawGATGAArmara ; cor=0.704; Ncor=0.519; logoDP=6.541; NsEucl=0.913; NSW=0.894; rcor=1070; rNcor=649; rlogoDP=193; rNsEucl=329; rNSW=706; rank_mean=589.400; match_rank= a 0 0 0 0 36 61 46 0 147 0 0 147 147 43 58 56 50 64 c 0 0 0 0 24 22 26 0 0 0 1 0 0 18 38 28 24 21 g 0 0 0 0 59 35 19 147 0 0 146 0 0 53 26 30 41 31 t 0 0 0 0 28 29 56 0 0 147 0 0 0 33 25 33 32 31

ONAC127_UN0430.1_JASPAR_shift6 (ONAC127:UN0430.1:JASPAR) 0.701 0.467 4.998 0.901 0.882 1086 835 389 575 824 741.800
; assembly_2 versus ONAC127_UN0430.1_JASPAR (ONAC127:UN0430.1:JASPAR); m=3/5; ncol2=12; w=0; offset=6; strand=D; shift=6; score= 741.8; ------dgAAGAAAAGgr ; cor=0.701; Ncor=0.467; logoDP=4.998; NsEucl=0.901; NSW=0.882; rcor=1086; rNcor=835; rlogoDP=389; rNsEucl=575; rNSW=824; rank_mean=741.800; match_rank= a 0 0 0 0 0 0 20 16 65 67 4 57 61 63 58 3 16 25 c 0 0 0 0 0 0 8 16 0 0 0 2 5 0 1 7 14 9 g 0 0 0 0 0 0 20 22 0 0 62 7 1 5 3 56 30 19 t 0 0 0 0 0 0 20 14 3 1 2 2 1 0 6 2 8 15

REM21_UN0408.1_JASPAR_rc_shift4 (REM21:UN0408.1:JASPAR_rc) 0.704 0.519 0.290 0.913 0.894 1068 648 1007 328 705 751.200
; assembly_2 versus REM21_UN0408.1_JASPAR_rc (REM21:UN0408.1:JASPAR_rc); m=4/5; ncol2=15; w=0; offset=4; strand=R; shift=4; score= 751.2; ----gawGATGAArmara ; cor=0.704; Ncor=0.519; logoDP=0.290; NsEucl=0.913; NSW=0.894; rcor=1068; rNcor=648; rlogoDP=1007; rNsEucl=328; rNSW=705; rank_mean=751.200; match_rank= a 0 0 0 0 245 415 313 0 1000 0 0 1000 1000 293 395 381 340 435 c 0 0 0 0 163 149.66 177 0 0 0 6.803 0 0 122 259 190 163 143 g 0 0 0 0 401 238 129 1000 0 0 993 0 0 361 177 204 279 211 t 0 0 0 0 190 197 381 0 0 1000 0 0 0 224.49 170 224.49 218 211

PEND_MA0127.1_JASPAR_rc_shift5 (PEND:MA0127.1:JASPAR_rc) 0.757 0.421 0.917 0.896 0.892 731 1003 871 674 736 803.000
; assembly_2 versus PEND_MA0127.1_JASPAR_rc (PEND:MA0127.1:JASPAR_rc); m=5/5; ncol2=10; w=0; offset=5; strand=R; shift=5; score= 803; -----mATAAGAAgT--- ; cor=0.757; Ncor=0.421; logoDP=0.917; NsEucl=0.896; NSW=0.892; rcor=731; rNcor=1003; rlogoDP=871; rNsEucl=674; rNSW=736; rank_mean=803.000; match_rank= a 0 0 0 0 0 21 35 1 39 38 4 34 39 10 2 0 0 0 c 0 0 0 0 0 14 0 2 1 2 2 4 2 7 8 0 0 0 g 0 0 0 0 0 5 3 7 0 2 33 0 0 19 2 0 0 0 t 0 0 0 0 0 2 4 32 2 0 3 4 1 6 30 0 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	Aligned matrices
assembly_2_shift0 (assembly_2)												; assembly_2; m=0 (reference); ncol1=18; shift=0; ncol=18; armmGrAGAAGAAGmrra ; Alignment reference a 187 129 149 144 73 146 391 20 404 410 34 408 401 51 193 151 155 171 c 75 55 132 169 13 16 10 12 10 5 7 6 7 17 141 42 42 81 g 68 154 66 46 310 240 12 397 16 11 388 14 13 351 46 167 135 90 t 106 98 89 77 40 34 23 7 6 10 7 8 15 17 56 76 104 94
TGA5_2_EEAD0137_EEADannot_shift3 (TGA5_2:EEAD0137:EEADannot)	0.728	0.607	4.608	0.921	0.907	893	318	437	205	559	482.400	; assembly_2 versus TGA5_2_EEAD0137_EEADannot (TGA5_2:EEAD0137:EEADannot); m=1/5; ncol2=15; w=0; offset=3; strand=D; shift=3; score= 482.4; ---tGrwGawGRwGAwGa ; cor=0.728; Ncor=0.607; logoDP=4.608; NsEucl=0.921; NSW=0.907; rcor=893; rNcor=318; rlogoDP=437; rNsEucl=205; rNSW=559; rank_mean=482.400; match_rank= a 0 0 0 32 11 110 84 3 137 60 0 146 72 0 148 93 41 118 c 0 0 0 47 1 12 18 0 6 47 0 0 29 0 9 30 0 38 g 0 0 0 18 188 70 26 201 38 15 204 53 19 204 47 13 163 40 t 0 0 0 107 4 12 76 0 23 82 0 5 84 0 0 68 0 8
AT5G18090.DAP_M0009_AthalianaCistrome_shift4 (AT5G18090.DAP:M0009:AthalianaCistrome)	0.704	0.519	6.541	0.913	0.894	1070	649	193	329	706	589.400	; assembly_2 versus AT5G18090.DAP_M0009_AthalianaCistrome (AT5G18090.DAP:M0009:AthalianaCistrome); m=2/5; ncol2=15; w=0; offset=4; strand=D; shift=4; score= 589.4; ----gawGATGAArmara ; cor=0.704; Ncor=0.519; logoDP=6.541; NsEucl=0.913; NSW=0.894; rcor=1070; rNcor=649; rlogoDP=193; rNsEucl=329; rNSW=706; rank_mean=589.400; match_rank= a 0 0 0 0 36 61 46 0 147 0 0 147 147 43 58 56 50 64 c 0 0 0 0 24 22 26 0 0 0 1 0 0 18 38 28 24 21 g 0 0 0 0 59 35 19 147 0 0 146 0 0 53 26 30 41 31 t 0 0 0 0 28 29 56 0 0 147 0 0 0 33 25 33 32 31
ONAC127_UN0430.1_JASPAR_shift6 (ONAC127:UN0430.1:JASPAR)	0.701	0.467	4.998	0.901	0.882	1086	835	389	575	824	741.800	; assembly_2 versus ONAC127_UN0430.1_JASPAR (ONAC127:UN0430.1:JASPAR); m=3/5; ncol2=12; w=0; offset=6; strand=D; shift=6; score= 741.8; ------dgAAGAAAAGgr ; cor=0.701; Ncor=0.467; logoDP=4.998; NsEucl=0.901; NSW=0.882; rcor=1086; rNcor=835; rlogoDP=389; rNsEucl=575; rNSW=824; rank_mean=741.800; match_rank= a 0 0 0 0 0 0 20 16 65 67 4 57 61 63 58 3 16 25 c 0 0 0 0 0 0 8 16 0 0 0 2 5 0 1 7 14 9 g 0 0 0 0 0 0 20 22 0 0 62 7 1 5 3 56 30 19 t 0 0 0 0 0 0 20 14 3 1 2 2 1 0 6 2 8 15
REM21_UN0408.1_JASPAR_rc_shift4 (REM21:UN0408.1:JASPAR_rc)	0.704	0.519	0.290	0.913	0.894	1068	648	1007	328	705	751.200	; assembly_2 versus REM21_UN0408.1_JASPAR_rc (REM21:UN0408.1:JASPAR_rc); m=4/5; ncol2=15; w=0; offset=4; strand=R; shift=4; score= 751.2; ----gawGATGAArmara ; cor=0.704; Ncor=0.519; logoDP=0.290; NsEucl=0.913; NSW=0.894; rcor=1068; rNcor=648; rlogoDP=1007; rNsEucl=328; rNSW=705; rank_mean=751.200; match_rank= a 0 0 0 0 245 415 313 0 1000 0 0 1000 1000 293 395 381 340 435 c 0 0 0 0 163 149.66 177 0 0 0 6.803 0 0 122 259 190 163 143 g 0 0 0 0 401 238 129 1000 0 0 993 0 0 361 177 204 279 211 t 0 0 0 0 190 197 381 0 0 1000 0 0 0 224.49 170 224.49 218 211
PEND_MA0127.1_JASPAR_rc_shift5 (PEND:MA0127.1:JASPAR_rc)	0.757	0.421	0.917	0.896	0.892	731	1003	871	674	736	803.000	; assembly_2 versus PEND_MA0127.1_JASPAR_rc (PEND:MA0127.1:JASPAR_rc); m=5/5; ncol2=10; w=0; offset=5; strand=R; shift=5; score= 803; -----mATAAGAAgT--- ; cor=0.757; Ncor=0.421; logoDP=0.917; NsEucl=0.896; NSW=0.892; rcor=731; rNcor=1003; rlogoDP=871; rNsEucl=674; rNSW=736; rank_mean=803.000; match_rank= a 0 0 0 0 0 21 35 1 39 38 4 34 39 10 2 0 0 0 c 0 0 0 0 0 14 0 2 1 2 2 4 2 7 8 0 0 0 g 0 0 0 0 0 5 3 7 0 2 33 0 0 19 2 0 0 0 t 0 0 0 0 0 2 4 32 2 0 3 4 1 6 30 0 0 0

One-to-n matrix alignment; reference matrix: assembly_9_shift0 ; 4 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
assembly_9_shift0 (assembly_9)
; assembly_9; m=0 (reference); ncol1=20; shift=0; ncol=20; wwykcTTCTTCTCTcTkyty ; Alignment reference a 77 77 56 40 32 12 9 11 6 7 12 18 26 22 26 23 26 45 65 67 c 68 66 117 40 192 15 12 229 12 18 247 8 206 20 200 27 65 138 70 81 g 48 36 37 104 18 9 6 14 12 6 10 3 13 7 17 2 123 21 42 39 t 105 119 88 114 56 262 271 44 268 267 29 269 53 249 55 246 84 94 121 111

CURE3UTR1_EEAD0076_EEADannot_shift9 (CURE3UTR1:EEAD0076:EEADannot) 0.871 0.435 6.038 0.904 0.908 188 941 228 510 553 484.000
; assembly_9 versus CURE3UTR1_EEAD0076_EEADannot (CURE3UTR1:EEAD0076:EEADannot); m=1/3; ncol2=10; w=0; offset=9; strand=D; shift=9; score= 484; ---------TCTCTCTCTy- ; cor=0.871; Ncor=0.435; logoDP=6.038; NsEucl=0.904; NSW=0.908; rcor=188; rNcor=941; rlogoDP=228; rNsEucl=510; rNSW=553; rank_mean=484.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 5 0 5 0 5 0 5 1 3 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 5 0 5 0 5 0 5 0 4 2 0

ONAC127_UN0430.1_JASPAR_rc_shift0 (ONAC127:UN0430.1:JASPAR_rc) 0.710 0.426 0.327 0.906 0.895 1024 974 989 462 694 828.600
; assembly_9 versus ONAC127_UN0430.1_JASPAR_rc (ONAC127:UN0430.1:JASPAR_rc); m=2/3; ncol2=12; w=0; offset=0; strand=R; shift=0; score= 828.6; ycCTTTTCTTch-------- ; cor=0.710; Ncor=0.426; logoDP=0.327; NsEucl=0.906; NSW=0.895; rcor=1024; rNcor=974; rlogoDP=989; rNsEucl=462; rNSW=694; rank_mean=828.600; match_rank= a 15 8 2 6 0 1 2 2 1 3 14 20 0 0 0 0 0 0 0 0 c 19 30 56 3 5 1 7 62 0 0 22 20 0 0 0 0 0 0 0 0 g 9 14 7 1 0 5 2 0 0 0 16 8 0 0 0 0 0 0 0 0 t 25 16 3 58 63 61 57 4 67 65 16 20 0 0 0 0 0 0 0 0

Carub.0005s0095.1_BBRBPC_1_AT2G01930_EEAD0614_EEADannot_rc_shift8 (Carub.0005s0095.1_BBRBPC_1_AT2G01930:EEAD0614:EEADannot_rc) 0.738 0.406 0.502 0.887 0.861 823 1055 944 810 997 925.800
; assembly_9 versus Carub.0005s0095.1_BBRBPC_1_AT2G01930_EEAD0614_EEADannot_rc (Carub.0005s0095.1_BBRBPC_1_AT2G01930:EEAD0614:EEADannot_rc); m=3/3; ncol2=11; w=0; offset=8; strand=R; shift=8; score= 925.8; --------yTyTCTCTCTC- ; cor=0.738; Ncor=0.406; logoDP=0.502; NsEucl=0.887; NSW=0.861; rcor=823; rNcor=1055; rlogoDP=944; rNsEucl=810; rNSW=997; rank_mean=925.800; match_rank= a 0 0 0 0 0 0 0 0 2 0 2 0 0 0 0 0 1 2 4 0 c 0 0 0 0 0 0 0 0 59 2 64 1 99 1 98 0 99 1 84 0 g 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 1 0 0 0 0 t 0 0 0 0 0 0 0 0 35 98 34 99 1 99 2 99 0 97 12 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	Aligned matrices
assembly_9_shift0 (assembly_9)												; assembly_9; m=0 (reference); ncol1=20; shift=0; ncol=20; wwykcTTCTTCTCTcTkyty ; Alignment reference a 77 77 56 40 32 12 9 11 6 7 12 18 26 22 26 23 26 45 65 67 c 68 66 117 40 192 15 12 229 12 18 247 8 206 20 200 27 65 138 70 81 g 48 36 37 104 18 9 6 14 12 6 10 3 13 7 17 2 123 21 42 39 t 105 119 88 114 56 262 271 44 268 267 29 269 53 249 55 246 84 94 121 111
CURE3UTR1_EEAD0076_EEADannot_shift9 (CURE3UTR1:EEAD0076:EEADannot)	0.871	0.435	6.038	0.904	0.908	188	941	228	510	553	484.000	; assembly_9 versus CURE3UTR1_EEAD0076_EEADannot (CURE3UTR1:EEAD0076:EEADannot); m=1/3; ncol2=10; w=0; offset=9; strand=D; shift=9; score= 484; ---------TCTCTCTCTy- ; cor=0.871; Ncor=0.435; logoDP=6.038; NsEucl=0.904; NSW=0.908; rcor=188; rNcor=941; rlogoDP=228; rNsEucl=510; rNSW=553; rank_mean=484.000; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 5 0 5 0 5 0 5 1 3 0 g 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 5 0 5 0 5 0 5 0 4 2 0
ONAC127_UN0430.1_JASPAR_rc_shift0 (ONAC127:UN0430.1:JASPAR_rc)	0.710	0.426	0.327	0.906	0.895	1024	974	989	462	694	828.600	; assembly_9 versus ONAC127_UN0430.1_JASPAR_rc (ONAC127:UN0430.1:JASPAR_rc); m=2/3; ncol2=12; w=0; offset=0; strand=R; shift=0; score= 828.6; ycCTTTTCTTch-------- ; cor=0.710; Ncor=0.426; logoDP=0.327; NsEucl=0.906; NSW=0.895; rcor=1024; rNcor=974; rlogoDP=989; rNsEucl=462; rNSW=694; rank_mean=828.600; match_rank= a 15 8 2 6 0 1 2 2 1 3 14 20 0 0 0 0 0 0 0 0 c 19 30 56 3 5 1 7 62 0 0 22 20 0 0 0 0 0 0 0 0 g 9 14 7 1 0 5 2 0 0 0 16 8 0 0 0 0 0 0 0 0 t 25 16 3 58 63 61 57 4 67 65 16 20 0 0 0 0 0 0 0 0
Carub.0005s0095.1_BBRBPC_1_AT2G01930_EEAD0614_EEADannot_rc_shift8 (Carub.0005s0095.1_BBRBPC_1_AT2G01930:EEAD0614:EEADannot_rc)	0.738	0.406	0.502	0.887	0.861	823	1055	944	810	997	925.800	; assembly_9 versus Carub.0005s0095.1_BBRBPC_1_AT2G01930_EEAD0614_EEADannot_rc (Carub.0005s0095.1_BBRBPC_1_AT2G01930:EEAD0614:EEADannot_rc); m=3/3; ncol2=11; w=0; offset=8; strand=R; shift=8; score= 925.8; --------yTyTCTCTCTC- ; cor=0.738; Ncor=0.406; logoDP=0.502; NsEucl=0.887; NSW=0.861; rcor=823; rNcor=1055; rlogoDP=944; rNsEucl=810; rNSW=997; rank_mean=925.800; match_rank= a 0 0 0 0 0 0 0 0 2 0 2 0 0 0 0 0 1 2 4 0 c 0 0 0 0 0 0 0 0 59 2 64 1 99 1 98 0 99 1 84 0 g 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 1 0 0 0 0 t 0 0 0 0 0 0 0 0 35 98 34 99 1 99 2 99 0 97 12 0

One-to-n matrix alignment; reference matrix: assembly_10_shift3 ; 5 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
assembly_10_shift3 (assembly_10)
; assembly_10; m=0 (reference); ncol1=11; shift=3; ncol=14; ---raAGAGGAGaw ; Alignment reference a 0 0 0 774 797 1782 143 1848 265 283 1848 172 844 803 c 0 0 0 251 289 30 31 19 51 47 26 63 247 266 g 0 0 0 493 483 107 1723 19 1520 1559 32 1611 437 384 t 0 0 0 443 392 42 64 75 125 72 55 115 433 508

Lysine-specific_6jnl_A_3D-footprint_shift3 (Lysine-specific:6jnl_A:3D-footprint) 0.867 0.473 4.050 0.893 0.931 198 819 510 727 275 505.800
; assembly_10 versus Lysine-specific_6jnl_A_3D-footprint (Lysine-specific:6jnl_A:3D-footprint); m=1/4; ncol2=6; w=0; offset=0; strand=D; shift=3; score= 505.8; ---aCAGAG----- ; cor=0.867; Ncor=0.473; logoDP=4.050; NsEucl=0.893; NSW=0.931; rcor=198; rNcor=819; rlogoDP=510; rNsEucl=727; rNSW=275; rank_mean=505.800; match_rank= a 0 0 0 48 0 96 16 96 0 0 0 0 0 0 c 0 0 0 16 80 0 0 0 0 0 0 0 0 0 g 0 0 0 16 0 0 80 0 96 0 0 0 0 0 t 0 0 0 16 16 0 0 0 0 0 0 0 0 0

Lysine-specific_6a57_A_3D-footprint_shift3 (Lysine-specific:6a57_A:3D-footprint) 0.811 0.443 2.788 0.880 0.913 446 917 683 896 491 686.600
; assembly_10 versus Lysine-specific_6a57_A_3D-footprint (Lysine-specific:6a57_A:3D-footprint); m=2/4; ncol2=6; w=0; offset=0; strand=D; shift=3; score= 686.6; ---ACAGAG----- ; cor=0.811; Ncor=0.443; logoDP=2.788; NsEucl=0.880; NSW=0.913; rcor=446; rNcor=917; rlogoDP=683; rNsEucl=896; rNSW=491; rank_mean=686.600; match_rank= a 0 0 0 69 10 69 10 86 0 0 0 0 0 0 c 0 0 0 9 86 9 0 0 0 0 0 0 0 0 g 0 0 0 9 0 9 86 10 96 0 0 0 0 0 t 0 0 0 9 0 9 0 0 0 0 0 0 0 0

MYB88_MA2029.2_JASPAR_rc_shift6 (MYB88:MA2029.2:JASPAR_rc) 0.765 0.510 0.867 0.875 0.876 699 684 882 939 881 817.000
; assembly_10 versus MYB88_MA2029.2_JASPAR_rc (MYB88:MA2029.2:JASPAR_rc); m=3/4; ncol2=9; w=0; offset=3; strand=R; shift=6; score= 817; ------GAGGAGCG ; cor=0.765; Ncor=0.510; logoDP=0.867; NsEucl=0.875; NSW=0.876; rcor=699; rNcor=684; rlogoDP=882; rNsEucl=939; rNSW=881; rank_mean=817.000; match_rank= a 0 0 0 0 0 0 17 141 13 0 139 0 1 0 c 0 0 0 0 0 0 6 3 3 2 27 1 165 6 g 0 0 0 0 0 0 138 6 152 165 1 167 1 159 t 0 0 0 0 0 0 7 18 0 1 1 0 1 3

REF6_MA1415.1_JASPAR_shift0 (REF6:MA1415.1:JASPAR) 0.737 0.421 4.165 0.873 0.871 838 1002 491 952 929 842.400
; assembly_10 versus REF6_MA1415.1_JASPAR (REF6:MA1415.1:JASPAR); m=4/4; ncol2=11; w=-3; offset=-3; strand=D; shift=0; score= 842.4; rAAACAGAGya--- ; cor=0.737; Ncor=0.421; logoDP=4.165; NsEucl=0.873; NSW=0.871; rcor=838; rNcor=1002; rlogoDP=491; rNsEucl=952; rNSW=929; rank_mean=842.400; match_rank= a 1983 2634 3458 3511 1 3622 6 3533 45 752 2249 0 0 0 c 209 137 27 34 3661 25 21 21 10 1063 473 0 0 0 g 1144 577 24 118 1 30 3625 105 3581 884 441 0 0 0 t 351 339 178 24 24 10 35 28 51 988 524 0 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	Aligned matrices
assembly_10_shift3 (assembly_10)												; assembly_10; m=0 (reference); ncol1=11; shift=3; ncol=14; ---raAGAGGAGaw ; Alignment reference a 0 0 0 774 797 1782 143 1848 265 283 1848 172 844 803 c 0 0 0 251 289 30 31 19 51 47 26 63 247 266 g 0 0 0 493 483 107 1723 19 1520 1559 32 1611 437 384 t 0 0 0 443 392 42 64 75 125 72 55 115 433 508
Lysine-specific_6jnl_A_3D-footprint_shift3 (Lysine-specific:6jnl_A:3D-footprint)	0.867	0.473	4.050	0.893	0.931	198	819	510	727	275	505.800	; assembly_10 versus Lysine-specific_6jnl_A_3D-footprint (Lysine-specific:6jnl_A:3D-footprint); m=1/4; ncol2=6; w=0; offset=0; strand=D; shift=3; score= 505.8; ---aCAGAG----- ; cor=0.867; Ncor=0.473; logoDP=4.050; NsEucl=0.893; NSW=0.931; rcor=198; rNcor=819; rlogoDP=510; rNsEucl=727; rNSW=275; rank_mean=505.800; match_rank= a 0 0 0 48 0 96 16 96 0 0 0 0 0 0 c 0 0 0 16 80 0 0 0 0 0 0 0 0 0 g 0 0 0 16 0 0 80 0 96 0 0 0 0 0 t 0 0 0 16 16 0 0 0 0 0 0 0 0 0
Lysine-specific_6a57_A_3D-footprint_shift3 (Lysine-specific:6a57_A:3D-footprint)	0.811	0.443	2.788	0.880	0.913	446	917	683	896	491	686.600	; assembly_10 versus Lysine-specific_6a57_A_3D-footprint (Lysine-specific:6a57_A:3D-footprint); m=2/4; ncol2=6; w=0; offset=0; strand=D; shift=3; score= 686.6; ---ACAGAG----- ; cor=0.811; Ncor=0.443; logoDP=2.788; NsEucl=0.880; NSW=0.913; rcor=446; rNcor=917; rlogoDP=683; rNsEucl=896; rNSW=491; rank_mean=686.600; match_rank= a 0 0 0 69 10 69 10 86 0 0 0 0 0 0 c 0 0 0 9 86 9 0 0 0 0 0 0 0 0 g 0 0 0 9 0 9 86 10 96 0 0 0 0 0 t 0 0 0 9 0 9 0 0 0 0 0 0 0 0
MYB88_MA2029.2_JASPAR_rc_shift6 (MYB88:MA2029.2:JASPAR_rc)	0.765	0.510	0.867	0.875	0.876	699	684	882	939	881	817.000	; assembly_10 versus MYB88_MA2029.2_JASPAR_rc (MYB88:MA2029.2:JASPAR_rc); m=3/4; ncol2=9; w=0; offset=3; strand=R; shift=6; score= 817; ------GAGGAGCG ; cor=0.765; Ncor=0.510; logoDP=0.867; NsEucl=0.875; NSW=0.876; rcor=699; rNcor=684; rlogoDP=882; rNsEucl=939; rNSW=881; rank_mean=817.000; match_rank= a 0 0 0 0 0 0 17 141 13 0 139 0 1 0 c 0 0 0 0 0 0 6 3 3 2 27 1 165 6 g 0 0 0 0 0 0 138 6 152 165 1 167 1 159 t 0 0 0 0 0 0 7 18 0 1 1 0 1 3
REF6_MA1415.1_JASPAR_shift0 (REF6:MA1415.1:JASPAR)	0.737	0.421	4.165	0.873	0.871	838	1002	491	952	929	842.400	; assembly_10 versus REF6_MA1415.1_JASPAR (REF6:MA1415.1:JASPAR); m=4/4; ncol2=11; w=-3; offset=-3; strand=D; shift=0; score= 842.4; rAAACAGAGya--- ; cor=0.737; Ncor=0.421; logoDP=4.165; NsEucl=0.873; NSW=0.871; rcor=838; rNcor=1002; rlogoDP=491; rNsEucl=952; rNSW=929; rank_mean=842.400; match_rank= a 1983 2634 3458 3511 1 3622 6 3533 45 752 2249 0 0 0 c 209 137 27 34 3661 25 21 21 10 1063 473 0 0 0 g 1144 577 24 118 1 30 3625 105 3581 884 441 0 0 0 t 351 339 178 24 24 10 35 28 51 988 524 0 0 0

One-to-n matrix alignment; reference matrix: assembly_14_shift4 ; 8 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
assembly_14_shift4 (assembly_14)
; assembly_14; m=0 (reference); ncol1=11; shift=4; ncol=15; ----dwGGAGGAGaw ; Alignment reference a 0 0 0 0 417 485 125 117 1180 127 150 1207 91 551 508 c 0 0 0 0 132 197 30 30 23 29 26 18 23 162 198 g 0 0 0 0 390 194 1081 1090 22 1058 1066 22 1093 295 233 t 0 0 0 0 339 402 42 41 53 64 36 31 71 270 339

TF3A.DAP_M0328_AthalianaCistrome_rc_shift4 (TF3A.DAP:M0328:AthalianaCistrome_rc) 0.818 0.474 0.352 0.922 0.934 407 814 976 192 249 527.600
; assembly_14 versus TF3A.DAP_M0328_AthalianaCistrome_rc (TF3A.DAP:M0328:AthalianaCistrome_rc); m=1/7; ncol2=19; w=0; offset=0; strand=R; shift=4; score= 527.6; ----GAGGAGGAgGA ; cor=0.818; Ncor=0.474; logoDP=0.352; NsEucl=0.922; NSW=0.934; rcor=407; rNcor=814; rlogoDP=976; rNsEucl=192; rNSW=249; rank_mean=527.600; match_rank= a 0 0 0 0 49 430 82 71 478 95 40 490 107 62 465 c 0 0 0 0 12 34 15 8 40 9 3 9 19 11 32 g 0 0 0 0 515 29 420 496 32 418 531 28 378 495 39 t 0 0 0 0 24 107 83 25 50 78 26 73 96 32 64

MYB88_MA2029.1_JASPAR_rc_shift5 (MYB88:MA2029.1:JASPAR_rc) 0.747 0.533 1.044 0.895 0.889 789 591 843 699 765 737.400
; assembly_14 versus MYB88_MA2029.1_JASPAR_rc (MYB88:MA2029.1:JASPAR_rc); m=2/7; ncol2=13; w=0; offset=1; strand=R; shift=5; score= 737.4; -----kgGAGGAGCG ; cor=0.747; Ncor=0.533; logoDP=1.044; NsEucl=0.895; NSW=0.889; rcor=789; rNcor=591; rlogoDP=843; rNsEucl=699; rNSW=765; rank_mean=737.400; match_rank= a 0 0 0 0 0 40 37 17 141 13 0 139 0 1 0 c 0 0 0 0 0 37 21 6 3 3 2 27 1 165 6 g 0 0 0 0 0 42 72 138 6 152 165 1 167 1 159 t 0 0 0 0 0 49 38 7 18 0 1 1 0 1 3

ChCUC1-chipseq_EEAD0152_EEADannot_rc_shift5 (ChCUC1-chipseq:EEAD0152:EEADannot_rc) 0.757 0.551 0.435 0.884 0.892 730 534 956 843 730 758.600
; assembly_14 versus ChCUC1-chipseq_EEAD0152_EEADannot_rc (ChCUC1-chipseq:EEAD0152:EEADannot_rc); m=3/7; ncol2=8; w=0; offset=1; strand=R; shift=5; score= 758.6; -----yGGYsGAG-- ; cor=0.757; Ncor=0.551; logoDP=0.435; NsEucl=0.884; NSW=0.892; rcor=730; rNcor=534; rlogoDP=956; rNsEucl=843; rNSW=730; rank_mean=758.600; match_rank= a 0 0 0 0 0 156 0 0 59 9 238 837 7 0 0 c 0 0 0 0 0 500 1 51 324 402 0 178 0 0 0 g 0 0 0 0 0 27 1212 1161 0 802 914 0 1165 0 0 t 0 0 0 0 0 530 0 0 830 0 60 198 41 0 0

NAC_EEAD0003_EEADannot_rc_shift3 (NAC:EEAD0003:EEADannot_rc) 0.724 0.603 2.822 0.875 0.845 910 333 677 938 1053 782.200
; assembly_14 versus NAC_EEAD0003_EEADannot_rc (NAC:EEAD0003:EEADannot_rc); m=4/7; ncol2=11; w=-1; offset=-1; strand=R; shift=3; score= 782.2; ---sCTGsmGGAGA- ; cor=0.724; Ncor=0.603; logoDP=2.822; NsEucl=0.875; NSW=0.845; rcor=910; rNcor=333; rlogoDP=677; rNsEucl=938; rNSW=1053; rank_mean=782.200; match_rank= a 0 0 0 0 0 0 0 0 50 0 0 100 0 100 0 c 0 0 0 50 100 0 0 50 50 0 0 0 0 0 0 g 0 0 0 50 0 0 100 50 0 100 100 0 100 0 0 t 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0

MYB88_MA2029.2_JASPAR_rc_shift7 (MYB88:MA2029.2:JASPAR_rc) 0.771 0.514 1.031 0.877 0.879 663 668 845 919 853 789.600
; assembly_14 versus MYB88_MA2029.2_JASPAR_rc (MYB88:MA2029.2:JASPAR_rc); m=5/7; ncol2=9; w=0; offset=3; strand=R; shift=7; score= 789.6; -------GAGGAGCG ; cor=0.771; Ncor=0.514; logoDP=1.031; NsEucl=0.877; NSW=0.879; rcor=663; rNcor=668; rlogoDP=845; rNsEucl=919; rNSW=853; rank_mean=789.600; match_rank= a 0 0 0 0 0 0 0 17 141 13 0 139 0 1 0 c 0 0 0 0 0 0 0 6 3 3 2 27 1 165 6 g 0 0 0 0 0 0 0 138 6 152 165 1 167 1 159 t 0 0 0 0 0 0 0 7 18 0 1 1 0 1 3

ONAC127_UN0429.2_JASPAR_shift5 (ONAC127:UN0429.2:JASPAR) 0.755 0.480 3.919 0.864 0.870 746 777 522 1007 932 796.800
; assembly_14 versus ONAC127_UN0429.2_JASPAR (ONAC127:UN0429.2:JASPAR); m=6/7; ncol2=7; w=0; offset=1; strand=D; shift=5; score= 796.8; -----AGGAAGA--- ; cor=0.755; Ncor=0.480; logoDP=3.919; NsEucl=0.864; NSW=0.870; rcor=746; rNcor=777; rlogoDP=522; rNsEucl=1007; rNSW=932; rank_mean=796.800; match_rank= a 0 0 0 0 0 49 0 1 50 53 1 51 0 0 0 c 0 0 0 0 0 0 3 0 0 1 1 0 0 0 0 g 0 0 0 0 0 1 46 48 0 1 52 2 0 0 0 t 0 0 0 0 0 5 6 6 5 0 1 2 0 0 0

ERF003_UN0363.1_JASPAR_rc_shift0 (ERF003:UN0363.1:JASPAR_rc) 0.724 0.434 1.347 0.888 0.887 909 943 802 807 779 848.000
; assembly_14 versus ERF003_UN0363.1_JASPAR_rc (ERF003:UN0363.1:JASPAR_rc); m=7/7; ncol2=13; w=-4; offset=-4; strand=R; shift=0; score= 848; ggCGGCGGaGgwg-- ; cor=0.724; Ncor=0.434; logoDP=1.347; NsEucl=0.888; NSW=0.887; rcor=909; rNcor=943; rlogoDP=802; rNsEucl=807; rNSW=779; rank_mean=848.000; match_rank= a 427 484 50 7 23 119 17 14 1442 95 399 837 524 0 0 c 166 214 2055 4 52 1796 4 31 463 23 224 480 174 0 0 g 1095 1288 4 2165 2086 9 2127 2112 19 1992 1383 277 1104 0 0 t 489 191 68 1 16 253 29 20 253 67 171 583 375 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	Aligned matrices
assembly_14_shift4 (assembly_14)												; assembly_14; m=0 (reference); ncol1=11; shift=4; ncol=15; ----dwGGAGGAGaw ; Alignment reference a 0 0 0 0 417 485 125 117 1180 127 150 1207 91 551 508 c 0 0 0 0 132 197 30 30 23 29 26 18 23 162 198 g 0 0 0 0 390 194 1081 1090 22 1058 1066 22 1093 295 233 t 0 0 0 0 339 402 42 41 53 64 36 31 71 270 339
TF3A.DAP_M0328_AthalianaCistrome_rc_shift4 (TF3A.DAP:M0328:AthalianaCistrome_rc)	0.818	0.474	0.352	0.922	0.934	407	814	976	192	249	527.600	; assembly_14 versus TF3A.DAP_M0328_AthalianaCistrome_rc (TF3A.DAP:M0328:AthalianaCistrome_rc); m=1/7; ncol2=19; w=0; offset=0; strand=R; shift=4; score= 527.6; ----GAGGAGGAgGA ; cor=0.818; Ncor=0.474; logoDP=0.352; NsEucl=0.922; NSW=0.934; rcor=407; rNcor=814; rlogoDP=976; rNsEucl=192; rNSW=249; rank_mean=527.600; match_rank= a 0 0 0 0 49 430 82 71 478 95 40 490 107 62 465 c 0 0 0 0 12 34 15 8 40 9 3 9 19 11 32 g 0 0 0 0 515 29 420 496 32 418 531 28 378 495 39 t 0 0 0 0 24 107 83 25 50 78 26 73 96 32 64
MYB88_MA2029.1_JASPAR_rc_shift5 (MYB88:MA2029.1:JASPAR_rc)	0.747	0.533	1.044	0.895	0.889	789	591	843	699	765	737.400	; assembly_14 versus MYB88_MA2029.1_JASPAR_rc (MYB88:MA2029.1:JASPAR_rc); m=2/7; ncol2=13; w=0; offset=1; strand=R; shift=5; score= 737.4; -----kgGAGGAGCG ; cor=0.747; Ncor=0.533; logoDP=1.044; NsEucl=0.895; NSW=0.889; rcor=789; rNcor=591; rlogoDP=843; rNsEucl=699; rNSW=765; rank_mean=737.400; match_rank= a 0 0 0 0 0 40 37 17 141 13 0 139 0 1 0 c 0 0 0 0 0 37 21 6 3 3 2 27 1 165 6 g 0 0 0 0 0 42 72 138 6 152 165 1 167 1 159 t 0 0 0 0 0 49 38 7 18 0 1 1 0 1 3
ChCUC1-chipseq_EEAD0152_EEADannot_rc_shift5 (ChCUC1-chipseq:EEAD0152:EEADannot_rc)	0.757	0.551	0.435	0.884	0.892	730	534	956	843	730	758.600	; assembly_14 versus ChCUC1-chipseq_EEAD0152_EEADannot_rc (ChCUC1-chipseq:EEAD0152:EEADannot_rc); m=3/7; ncol2=8; w=0; offset=1; strand=R; shift=5; score= 758.6; -----yGGYsGAG-- ; cor=0.757; Ncor=0.551; logoDP=0.435; NsEucl=0.884; NSW=0.892; rcor=730; rNcor=534; rlogoDP=956; rNsEucl=843; rNSW=730; rank_mean=758.600; match_rank= a 0 0 0 0 0 156 0 0 59 9 238 837 7 0 0 c 0 0 0 0 0 500 1 51 324 402 0 178 0 0 0 g 0 0 0 0 0 27 1212 1161 0 802 914 0 1165 0 0 t 0 0 0 0 0 530 0 0 830 0 60 198 41 0 0
NAC_EEAD0003_EEADannot_rc_shift3 (NAC:EEAD0003:EEADannot_rc)	0.724	0.603	2.822	0.875	0.845	910	333	677	938	1053	782.200	; assembly_14 versus NAC_EEAD0003_EEADannot_rc (NAC:EEAD0003:EEADannot_rc); m=4/7; ncol2=11; w=-1; offset=-1; strand=R; shift=3; score= 782.2; ---sCTGsmGGAGA- ; cor=0.724; Ncor=0.603; logoDP=2.822; NsEucl=0.875; NSW=0.845; rcor=910; rNcor=333; rlogoDP=677; rNsEucl=938; rNSW=1053; rank_mean=782.200; match_rank= a 0 0 0 0 0 0 0 0 50 0 0 100 0 100 0 c 0 0 0 50 100 0 0 50 50 0 0 0 0 0 0 g 0 0 0 50 0 0 100 50 0 100 100 0 100 0 0 t 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0
MYB88_MA2029.2_JASPAR_rc_shift7 (MYB88:MA2029.2:JASPAR_rc)	0.771	0.514	1.031	0.877	0.879	663	668	845	919	853	789.600	; assembly_14 versus MYB88_MA2029.2_JASPAR_rc (MYB88:MA2029.2:JASPAR_rc); m=5/7; ncol2=9; w=0; offset=3; strand=R; shift=7; score= 789.6; -------GAGGAGCG ; cor=0.771; Ncor=0.514; logoDP=1.031; NsEucl=0.877; NSW=0.879; rcor=663; rNcor=668; rlogoDP=845; rNsEucl=919; rNSW=853; rank_mean=789.600; match_rank= a 0 0 0 0 0 0 0 17 141 13 0 139 0 1 0 c 0 0 0 0 0 0 0 6 3 3 2 27 1 165 6 g 0 0 0 0 0 0 0 138 6 152 165 1 167 1 159 t 0 0 0 0 0 0 0 7 18 0 1 1 0 1 3
ONAC127_UN0429.2_JASPAR_shift5 (ONAC127:UN0429.2:JASPAR)	0.755	0.480	3.919	0.864	0.870	746	777	522	1007	932	796.800	; assembly_14 versus ONAC127_UN0429.2_JASPAR (ONAC127:UN0429.2:JASPAR); m=6/7; ncol2=7; w=0; offset=1; strand=D; shift=5; score= 796.8; -----AGGAAGA--- ; cor=0.755; Ncor=0.480; logoDP=3.919; NsEucl=0.864; NSW=0.870; rcor=746; rNcor=777; rlogoDP=522; rNsEucl=1007; rNSW=932; rank_mean=796.800; match_rank= a 0 0 0 0 0 49 0 1 50 53 1 51 0 0 0 c 0 0 0 0 0 0 3 0 0 1 1 0 0 0 0 g 0 0 0 0 0 1 46 48 0 1 52 2 0 0 0 t 0 0 0 0 0 5 6 6 5 0 1 2 0 0 0
ERF003_UN0363.1_JASPAR_rc_shift0 (ERF003:UN0363.1:JASPAR_rc)	0.724	0.434	1.347	0.888	0.887	909	943	802	807	779	848.000	; assembly_14 versus ERF003_UN0363.1_JASPAR_rc (ERF003:UN0363.1:JASPAR_rc); m=7/7; ncol2=13; w=-4; offset=-4; strand=R; shift=0; score= 848; ggCGGCGGaGgwg-- ; cor=0.724; Ncor=0.434; logoDP=1.347; NsEucl=0.888; NSW=0.887; rcor=909; rNcor=943; rlogoDP=802; rNsEucl=807; rNSW=779; rank_mean=848.000; match_rank= a 427 484 50 7 23 119 17 14 1442 95 399 837 524 0 0 c 166 214 2055 4 52 1796 4 31 463 23 224 480 174 0 0 g 1095 1288 4 2165 2086 9 2127 2112 19 1992 1383 277 1104 0 0 t 489 191 68 1 16 253 29 20 253 67 171 583 375 0 0

One-to-n matrix alignment; reference matrix: assembly_5_shift0 ; 8 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
assembly_5_shift0 (assembly_5)
; assembly_5; m=0 (reference); ncol1=20; shift=0; ncol=20; raAvAgAgAGAAGAAgmraa ; Alignment reference a 172 174 330 115 363 104 352 93 391 50 398 384 68 403 384 104 170 159 170 160 c 53 62 21 168 13 26 13 26 10 20 7 16 18 9 8 23 140 42 51 88 g 123 105 37 114 31 271 39 281 11 346 18 19 326 13 28 265 59 137 104 84 t 85 92 45 36 26 32 29 33 21 17 10 14 21 8 13 41 64 95 108 101

CURE3UTR1_EEAD0076_EEADannot_rc_shift1 (CURE3UTR1:EEAD0076:EEADannot_rc) 0.899 0.449 0.287 0.912 0.923 114 892 1010 341 383 548.000
; assembly_5 versus CURE3UTR1_EEAD0076_EEADannot_rc (CURE3UTR1:EEAD0076:EEADannot_rc); m=1/7; ncol2=10; w=0; offset=1; strand=R; shift=1; score= 548; -rAGAGAGAGA--------- ; cor=0.899; Ncor=0.449; logoDP=0.287; NsEucl=0.912; NSW=0.923; rcor=114; rNcor=892; rlogoDP=1010; rNsEucl=341; rNSW=383; rank_mean=548.000; match_rank= a 0 2 4 0 5 0 5 0 5 0 5 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 3 1 5 0 5 0 5 0 5 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Carub.0005s0095.1_BBRBPC_1_AT2G01930_EEAD0614_EEADannot_shift1 (Carub.0005s0095.1_BBRBPC_1_AT2G01930:EEAD0614:EEADannot) 0.803 0.442 5.616 0.900 0.891 488 922 274 592 752 605.600
; assembly_5 versus Carub.0005s0095.1_BBRBPC_1_AT2G01930_EEAD0614_EEADannot (Carub.0005s0095.1_BBRBPC_1_AT2G01930:EEAD0614:EEADannot); m=2/7; ncol2=11; w=0; offset=1; strand=D; shift=1; score= 605.6; -GAGAGAGArAr-------- ; cor=0.803; Ncor=0.442; logoDP=5.616; NsEucl=0.900; NSW=0.891; rcor=488; rNcor=922; rlogoDP=274; rNsEucl=592; rNSW=752; rank_mean=605.600; match_rank= a 0 12 97 0 99 2 99 1 99 34 98 35 0 0 0 0 0 0 0 0 c 0 0 0 0 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 g 0 84 1 99 0 98 1 99 1 64 2 59 0 0 0 0 0 0 0 0 t 0 4 2 1 0 0 0 0 0 2 0 2 0 0 0 0 0 0 0 0

NTL8_MA1678.2_JASPAR_shift7 (NTL8:MA1678.2:JASPAR) 0.710 0.461 4.370 0.912 0.900 1025 849 464 340 647 665.000
; assembly_5 versus NTL8_MA1678.2_JASPAR (NTL8:MA1678.2:JASPAR); m=3/7; ncol2=13; w=0; offset=7; strand=D; shift=7; score= 665; -------wtGAAGAAACctw ; cor=0.710; Ncor=0.461; logoDP=4.370; NsEucl=0.912; NSW=0.900; rcor=1025; rNcor=849; rlogoDP=464; rNsEucl=340; rNSW=647; rank_mean=665.000; match_rank= a 0 0 0 0 0 0 0 324 245 64 958 912 8 795 957 933 45 220 245 324 c 0 0 0 0 0 0 0 197 165 171 5 12 6 79 4 10 850 468 189 201 g 0 0 0 0 0 0 0 197 175 669 10 42 956 35 3 16 40 96 142 154 t 0 0 0 0 0 0 0 264 397 78 9 16 12 73 18 23 47 198 406 303

TAGL1_UN0426.1_JASPAR_shift6 (TAGL1:UN0426.1:JASPAR) 0.707 0.460 4.414 0.909 0.893 1042 854 460 400 716 694.400
; assembly_5 versus TAGL1_UN0426.1_JASPAR (TAGL1:UN0426.1:JASPAR); m=4/7; ncol2=13; w=0; offset=6; strand=D; shift=6; score= 694.4; ------waagAAAAAGGaa- ; cor=0.707; Ncor=0.460; logoDP=4.414; NsEucl=0.909; NSW=0.893; rcor=1042; rNcor=854; rlogoDP=460; rNsEucl=400; rNSW=716; rank_mean=694.400; match_rank= a 0 0 0 0 0 0 2178 2082 2930 1091 4576 4641 4647 4590 4562 320 461 2263 2526 0 c 0 0 0 0 0 0 657 806 676 351 61 47 23 14 37 46 83 587 536 0 g 0 0 0 0 0 0 789 785 401 2722 106 85 83 109 85 4328 4129 893 797 0 t 0 0 0 0 0 0 1227 1178 844 687 108 78 98 138 167 157 178 1108 992 0

ONAC127_UN0430.1_JASPAR_shift8 (ONAC127:UN0430.1:JASPAR) 0.714 0.429 4.122 0.907 0.897 983 958 502 446 680 713.800
; assembly_5 versus ONAC127_UN0430.1_JASPAR (ONAC127:UN0430.1:JASPAR); m=5/7; ncol2=12; w=0; offset=8; strand=D; shift=8; score= 713.8; --------dgAAGAAAAGgr ; cor=0.714; Ncor=0.429; logoDP=4.122; NsEucl=0.907; NSW=0.897; rcor=983; rNcor=958; rlogoDP=502; rNsEucl=446; rNSW=680; rank_mean=713.800; match_rank= a 0 0 0 0 0 0 0 0 20 16 65 67 4 57 61 63 58 3 16 25 c 0 0 0 0 0 0 0 0 8 16 0 0 0 2 5 0 1 7 14 9 g 0 0 0 0 0 0 0 0 20 22 0 0 62 7 1 5 3 56 30 19 t 0 0 0 0 0 0 0 0 20 14 3 1 2 2 1 0 6 2 8 15

Zm00001d027846_MA1823.1_JASPAR_shift4 (Zm00001d027846:MA1823.1:JASPAR) 0.706 0.424 4.076 0.900 0.881 1053 988 507 587 834 793.800
; assembly_5 versus Zm00001d027846_MA1823.1_JASPAR (Zm00001d027846:MA1823.1:JASPAR); m=6/7; ncol2=12; w=0; offset=4; strand=D; shift=4; score= 793.8; ----arAAAGAAAAar---- ; cor=0.706; Ncor=0.424; logoDP=4.076; NsEucl=0.900; NSW=0.881; rcor=1053; rNcor=988; rlogoDP=507; rNsEucl=587; rNSW=834; rank_mean=793.800; match_rank= a 0 0 0 0 430 399 818 893 929 23 896 915 914 752 429 424 0 0 0 0 c 0 0 0 0 159 157 46 17 6 24 29 11 27 53 154 130 0 0 0 0 g 0 0 0 0 223 264 86 44 30 866 38 28 33 123 233 261 0 0 0 0 t 0 0 0 0 175 167 37 33 22 74 24 33 13 59 171 172 0 0 0 0

BPC1.ampDAP_M0149_AthalianaCistrome_rc_shift1 (BPC1.ampDAP:M0149:AthalianaCistrome_rc) 0.710 0.533 0.547 0.905 0.864 1022 593 935 495 975 804.000
; assembly_5 versus BPC1.ampDAP_M0149_AthalianaCistrome_rc (BPC1.ampDAP:M0149:AthalianaCistrome_rc); m=7/7; ncol2=15; w=0; offset=1; strand=R; shift=1; score= 804; -rAGAGAGAGArAGAg---- ; cor=0.710; Ncor=0.533; logoDP=0.547; NsEucl=0.905; NSW=0.864; rcor=1022; rNcor=593; rlogoDP=935; rNsEucl=495; rNSW=975; rank_mean=804.000; match_rank= a 0 160 550 36 587 68 598 9 592 16 586 190 534 75 469 109 0 0 0 0 c 0 7 1 10 0 5 0 3 0 1 0 12 0 25 24 14 0 0 0 0 g 0 337 46 550 6 523 0 576 3 572 12 380 44 468 53 398 0 0 0 0 t 0 94 1 2 5 2 0 10 3 9 0 16 20 30 52 77 0 0 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	Aligned matrices
assembly_5_shift0 (assembly_5)												; assembly_5; m=0 (reference); ncol1=20; shift=0; ncol=20; raAvAgAgAGAAGAAgmraa ; Alignment reference a 172 174 330 115 363 104 352 93 391 50 398 384 68 403 384 104 170 159 170 160 c 53 62 21 168 13 26 13 26 10 20 7 16 18 9 8 23 140 42 51 88 g 123 105 37 114 31 271 39 281 11 346 18 19 326 13 28 265 59 137 104 84 t 85 92 45 36 26 32 29 33 21 17 10 14 21 8 13 41 64 95 108 101
CURE3UTR1_EEAD0076_EEADannot_rc_shift1 (CURE3UTR1:EEAD0076:EEADannot_rc)	0.899	0.449	0.287	0.912	0.923	114	892	1010	341	383	548.000	; assembly_5 versus CURE3UTR1_EEAD0076_EEADannot_rc (CURE3UTR1:EEAD0076:EEADannot_rc); m=1/7; ncol2=10; w=0; offset=1; strand=R; shift=1; score= 548; -rAGAGAGAGA--------- ; cor=0.899; Ncor=0.449; logoDP=0.287; NsEucl=0.912; NSW=0.923; rcor=114; rNcor=892; rlogoDP=1010; rNsEucl=341; rNSW=383; rank_mean=548.000; match_rank= a 0 2 4 0 5 0 5 0 5 0 5 0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 g 0 3 1 5 0 5 0 5 0 5 0 0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Carub.0005s0095.1_BBRBPC_1_AT2G01930_EEAD0614_EEADannot_shift1 (Carub.0005s0095.1_BBRBPC_1_AT2G01930:EEAD0614:EEADannot)	0.803	0.442	5.616	0.900	0.891	488	922	274	592	752	605.600	; assembly_5 versus Carub.0005s0095.1_BBRBPC_1_AT2G01930_EEAD0614_EEADannot (Carub.0005s0095.1_BBRBPC_1_AT2G01930:EEAD0614:EEADannot); m=2/7; ncol2=11; w=0; offset=1; strand=D; shift=1; score= 605.6; -GAGAGAGArAr-------- ; cor=0.803; Ncor=0.442; logoDP=5.616; NsEucl=0.900; NSW=0.891; rcor=488; rNcor=922; rlogoDP=274; rNsEucl=592; rNSW=752; rank_mean=605.600; match_rank= a 0 12 97 0 99 2 99 1 99 34 98 35 0 0 0 0 0 0 0 0 c 0 0 0 0 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 g 0 84 1 99 0 98 1 99 1 64 2 59 0 0 0 0 0 0 0 0 t 0 4 2 1 0 0 0 0 0 2 0 2 0 0 0 0 0 0 0 0
NTL8_MA1678.2_JASPAR_shift7 (NTL8:MA1678.2:JASPAR)	0.710	0.461	4.370	0.912	0.900	1025	849	464	340	647	665.000	; assembly_5 versus NTL8_MA1678.2_JASPAR (NTL8:MA1678.2:JASPAR); m=3/7; ncol2=13; w=0; offset=7; strand=D; shift=7; score= 665; -------wtGAAGAAACctw ; cor=0.710; Ncor=0.461; logoDP=4.370; NsEucl=0.912; NSW=0.900; rcor=1025; rNcor=849; rlogoDP=464; rNsEucl=340; rNSW=647; rank_mean=665.000; match_rank= a 0 0 0 0 0 0 0 324 245 64 958 912 8 795 957 933 45 220 245 324 c 0 0 0 0 0 0 0 197 165 171 5 12 6 79 4 10 850 468 189 201 g 0 0 0 0 0 0 0 197 175 669 10 42 956 35 3 16 40 96 142 154 t 0 0 0 0 0 0 0 264 397 78 9 16 12 73 18 23 47 198 406 303
TAGL1_UN0426.1_JASPAR_shift6 (TAGL1:UN0426.1:JASPAR)	0.707	0.460	4.414	0.909	0.893	1042	854	460	400	716	694.400	; assembly_5 versus TAGL1_UN0426.1_JASPAR (TAGL1:UN0426.1:JASPAR); m=4/7; ncol2=13; w=0; offset=6; strand=D; shift=6; score= 694.4; ------waagAAAAAGGaa- ; cor=0.707; Ncor=0.460; logoDP=4.414; NsEucl=0.909; NSW=0.893; rcor=1042; rNcor=854; rlogoDP=460; rNsEucl=400; rNSW=716; rank_mean=694.400; match_rank= a 0 0 0 0 0 0 2178 2082 2930 1091 4576 4641 4647 4590 4562 320 461 2263 2526 0 c 0 0 0 0 0 0 657 806 676 351 61 47 23 14 37 46 83 587 536 0 g 0 0 0 0 0 0 789 785 401 2722 106 85 83 109 85 4328 4129 893 797 0 t 0 0 0 0 0 0 1227 1178 844 687 108 78 98 138 167 157 178 1108 992 0
ONAC127_UN0430.1_JASPAR_shift8 (ONAC127:UN0430.1:JASPAR)	0.714	0.429	4.122	0.907	0.897	983	958	502	446	680	713.800	; assembly_5 versus ONAC127_UN0430.1_JASPAR (ONAC127:UN0430.1:JASPAR); m=5/7; ncol2=12; w=0; offset=8; strand=D; shift=8; score= 713.8; --------dgAAGAAAAGgr ; cor=0.714; Ncor=0.429; logoDP=4.122; NsEucl=0.907; NSW=0.897; rcor=983; rNcor=958; rlogoDP=502; rNsEucl=446; rNSW=680; rank_mean=713.800; match_rank= a 0 0 0 0 0 0 0 0 20 16 65 67 4 57 61 63 58 3 16 25 c 0 0 0 0 0 0 0 0 8 16 0 0 0 2 5 0 1 7 14 9 g 0 0 0 0 0 0 0 0 20 22 0 0 62 7 1 5 3 56 30 19 t 0 0 0 0 0 0 0 0 20 14 3 1 2 2 1 0 6 2 8 15
Zm00001d027846_MA1823.1_JASPAR_shift4 (Zm00001d027846:MA1823.1:JASPAR)	0.706	0.424	4.076	0.900	0.881	1053	988	507	587	834	793.800	; assembly_5 versus Zm00001d027846_MA1823.1_JASPAR (Zm00001d027846:MA1823.1:JASPAR); m=6/7; ncol2=12; w=0; offset=4; strand=D; shift=4; score= 793.8; ----arAAAGAAAAar---- ; cor=0.706; Ncor=0.424; logoDP=4.076; NsEucl=0.900; NSW=0.881; rcor=1053; rNcor=988; rlogoDP=507; rNsEucl=587; rNSW=834; rank_mean=793.800; match_rank= a 0 0 0 0 430 399 818 893 929 23 896 915 914 752 429 424 0 0 0 0 c 0 0 0 0 159 157 46 17 6 24 29 11 27 53 154 130 0 0 0 0 g 0 0 0 0 223 264 86 44 30 866 38 28 33 123 233 261 0 0 0 0 t 0 0 0 0 175 167 37 33 22 74 24 33 13 59 171 172 0 0 0 0
BPC1.ampDAP_M0149_AthalianaCistrome_rc_shift1 (BPC1.ampDAP:M0149:AthalianaCistrome_rc)	0.710	0.533	0.547	0.905	0.864	1022	593	935	495	975	804.000	; assembly_5 versus BPC1.ampDAP_M0149_AthalianaCistrome_rc (BPC1.ampDAP:M0149:AthalianaCistrome_rc); m=7/7; ncol2=15; w=0; offset=1; strand=R; shift=1; score= 804; -rAGAGAGAGArAGAg---- ; cor=0.710; Ncor=0.533; logoDP=0.547; NsEucl=0.905; NSW=0.864; rcor=1022; rNcor=593; rlogoDP=935; rNsEucl=495; rNSW=975; rank_mean=804.000; match_rank= a 0 160 550 36 587 68 598 9 592 16 586 190 534 75 469 109 0 0 0 0 c 0 7 1 10 0 5 0 3 0 1 0 12 0 25 24 14 0 0 0 0 g 0 337 46 550 6 523 0 576 3 572 12 380 44 468 53 398 0 0 0 0 t 0 94 1 2 5 2 0 10 3 9 0 16 20 30 52 77 0 0 0 0

One-to-n matrix alignment; reference matrix: assembly_15_shift3 ; 10 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
assembly_15_shift3 (assembly_15)
; assembly_15; m=0 (reference); ncol1=13; shift=3; ncol=16; ---wdwCGGAGAAAww ; Alignment reference a 0 0 0 265 238 231 80 67 52 661 45 690 668 627 268 257 c 0 0 0 139 99 152 500 36 8 14 17 3 8 13 111 131 g 0 0 0 117 178 123 38 564 624 13 635 10 19 34 145 113 t 0 0 0 189 195 204 92 43 26 22 13 7 15 36 186 209

AtGRP7iCLIP_EEAD0145_EEADannot_rc_shift9 (AtGRP7iCLIP:EEAD0145:EEADannot_rc) 0.833 0.448 0.750 0.901 0.932 338 897 898 567 264 592.800
; assembly_15 versus AtGRP7iCLIP_EEAD0145_EEADannot_rc (AtGRP7iCLIP:EEAD0145:EEADannot_rc); m=1/9; ncol2=7; w=0; offset=6; strand=R; shift=9; score= 592.8; ---------aGAAACa ; cor=0.833; Ncor=0.448; logoDP=0.750; NsEucl=0.901; NSW=0.932; rcor=338; rNcor=897; rlogoDP=898; rNsEucl=567; rNSW=264; rank_mean=592.800; match_rank= a 0 0 0 0 0 0 0 0 0 55 4 97 77 77 8 60 c 0 0 0 0 0 0 0 0 0 20 19 1 0 1 77 8 g 0 0 0 0 0 0 0 0 0 13 68 0 11 17 0 15 t 0 0 0 0 0 0 0 0 0 12 9 2 12 5 15 17

Carub.0006s0445.1_TRIHELIX_4_AT5G05550_EEAD0616_EEADannot_shift3 (Carub.0006s0445.1_TRIHELIX_4_AT5G05550:EEAD0616:EEADannot) 0.767 0.472 2.618 0.893 0.909 689 823 703 718 533 693.200
; assembly_15 versus Carub.0006s0445.1_TRIHELIX_4_AT5G05550_EEAD0616_EEADannot (Carub.0006s0445.1_TRIHELIX_4_AT5G05550:EEAD0616:EEADannot); m=2/9; ncol2=8; w=0; offset=0; strand=D; shift=3; score= 693.2; ---CrCCGGMr----- ; cor=0.767; Ncor=0.472; logoDP=2.618; NsEucl=0.893; NSW=0.909; rcor=689; rNcor=823; rlogoDP=703; rNsEucl=718; rNSW=533; rank_mean=693.200; match_rank= a 0 0 0 10 41 6 0 1 2 71 35 0 0 0 0 0 c 0 0 0 73 2 76 100 0 7 28 4 0 0 0 0 0 g 0 0 0 4 56 0 0 99 88 1 60 0 0 0 0 0 t 0 0 0 13 1 18 0 0 3 0 1 0 0 0 0 0

NAC_EEAD0003_EEADannot_rc_shift1 (NAC:EEAD0003:EEADannot_rc) 0.787 0.472 2.827 0.883 0.878 566 821 673 848 865 754.600
; assembly_15 versus NAC_EEAD0003_EEADannot_rc (NAC:EEAD0003:EEADannot_rc); m=3/9; ncol2=11; w=-2; offset=-2; strand=R; shift=1; score= 754.6; -sCTGsmGGAGA---- ; cor=0.787; Ncor=0.472; logoDP=2.827; NsEucl=0.883; NSW=0.878; rcor=566; rNcor=821; rlogoDP=673; rNsEucl=848; rNSW=865; rank_mean=754.600; match_rank= a 0 0 0 0 0 0 50 0 0 100 0 100 0 0 0 0 c 0 50 100 0 0 50 50 0 0 0 0 0 0 0 0 0 g 0 50 0 0 100 50 0 100 100 0 100 0 0 0 0 0 t 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0

At3g14180.DAP_M0777_AthalianaCistrome_shift2 (At3g14180.DAP:M0777:AthalianaCistrome) 0.714 0.510 3.899 0.889 0.876 988 682 529 800 882 776.200
; assembly_15 versus At3g14180.DAP_M0777_AthalianaCistrome (At3g14180.DAP:M0777:AthalianaCistrome); m=4/9; ncol2=11; w=-1; offset=-1; strand=D; shift=2; score= 776.2; --TCrCCGGArAw--- ; cor=0.714; Ncor=0.510; logoDP=3.899; NsEucl=0.889; NSW=0.876; rcor=988; rNcor=682; rlogoDP=529; rNsEucl=800; rNSW=882; rank_mean=776.200; match_rank= a 0 0 33 23 194 11 0 0 0 533 304 418 303 0 0 0 c 0 0 80 490 0 556 598 0 0 32 6 32 90 0 0 0 g 0 0 34 23 404 1 0 598 598 8 273 47 37 0 0 0 t 0 0 451 62 0 30 0 0 0 25 15 101 168 0 0 0

WER_WER_Athamap_rc_shift0 (WER:WER:Athamap_rc) 0.711 0.444 1.276 0.901 0.901 1015 913 808 583 634 790.600
; assembly_15 versus WER_WER_Athamap_rc (WER:WER:Athamap_rc); m=5/9; ncol2=13; w=-3; offset=-3; strand=R; shift=0; score= 790.6; kACwrrcrkwrwA--- ; cor=0.711; Ncor=0.444; logoDP=1.276; NsEucl=0.901; NSW=0.901; rcor=1015; rNcor=913; rlogoDP=808; rNsEucl=583; rNSW=634; rank_mean=790.600; match_rank= a 0 5 0 4 2 3 1 4 0 4 2 4 5 0 0 0 c 0 0 5 0 0 0 4 0 0 0 0 0 0 0 0 0 g 4 1 1 0 4 2 0 2 3 0 4 0 1 0 0 0 t 2 0 0 2 0 1 1 0 3 2 0 2 0 0 0 0

AT3G58630_UN0391.2_JASPAR_shift2 (AT3G58630:UN0391.2:JASPAR) 0.724 0.465 3.388 0.882 0.874 911 839 593 874 901 823.600
; assembly_15 versus AT3G58630_UN0391.2_JASPAR (AT3G58630:UN0391.2:JASPAR); m=6/9; ncol2=10; w=-1; offset=-1; strand=D; shift=2; score= 823.6; --TCGCCGGAGa---- ; cor=0.724; Ncor=0.465; logoDP=3.388; NsEucl=0.882; NSW=0.874; rcor=911; rNcor=839; rlogoDP=593; rNsEucl=874; rNSW=901; rank_mean=823.600; match_rank= a 0 0 97 38 139 29 0 0 0 793 241 575 0 0 0 0 c 0 0 150 804 2 950 1000 0 0 101 27 105 0 0 0 0 g 0 0 59 45 859 0 0 1000 1000 29 701 114 0 0 0 0 t 0 0 694 114 0 22 0 0 0 77 31 207 0 0 0 0

NTL8_MA1678.3_JASPAR_shift7 (NTL8:MA1678.3:JASPAR) 0.728 0.448 5.066 0.865 0.854 897 901 376 1002 1029 841.000
; assembly_15 versus NTL8_MA1678.3_JASPAR (NTL8:MA1678.3:JASPAR); m=7/9; ncol2=8; w=0; offset=4; strand=D; shift=7; score= 841; -------GAAGAAAC- ; cor=0.728; Ncor=0.448; logoDP=5.066; NsEucl=0.865; NSW=0.854; rcor=897; rNcor=901; rlogoDP=376; rNsEucl=1002; rNSW=1029; rank_mean=841.000; match_rank= a 0 0 0 0 0 0 0 64 958 912 8 795 957 933 45 0 c 0 0 0 0 0 0 0 171 5 12 6 79 4 10 850 0 g 0 0 0 0 0 0 0 669 10 42 956 35 3 16 40 0 t 0 0 0 0 0 0 0 78 9 16 12 73 18 23 47 0

ASIL2_MA2039.2_JASPAR_rc_shift2 (ASIL2:MA2039.2:JASPAR_rc) 0.751 0.429 0.631 0.875 0.874 771 956 914 946 905 898.400
; assembly_15 versus ASIL2_MA2039.2_JASPAR_rc (ASIL2:MA2039.2:JASPAR_rc); m=8/9; ncol2=9; w=-1; offset=-1; strand=R; shift=2; score= 898.4; --tCGCCGGAG----- ; cor=0.751; Ncor=0.429; logoDP=0.631; NsEucl=0.875; NSW=0.874; rcor=771; rNcor=956; rlogoDP=914; rNsEucl=946; rNSW=905; rank_mean=898.400; match_rank= a 0 0 174 40 134 31 1 2 6 1168 244 0 0 0 0 0 c 0 0 228 1217 7 1244 1382 0 14 147 33 0 0 0 0 0 g 0 0 144 59 1233 61 2 1391 1367 10 1089 0 0 0 0 0 t 0 0 853 83 25 63 14 6 12 74 33 0 0 0 0 0

ENAP2_MA2040.2_JASPAR_rc_shift2 (ENAP2:MA2040.2:JASPAR_rc) 0.745 0.426 0.611 0.874 0.872 793 975 922 950 919 911.800
; assembly_15 versus ENAP2_MA2040.2_JASPAR_rc (ENAP2:MA2040.2:JASPAR_rc); m=9/9; ncol2=9; w=-1; offset=-1; strand=R; shift=2; score= 911.8; --tCGCCGGAG----- ; cor=0.745; Ncor=0.426; logoDP=0.611; NsEucl=0.874; NSW=0.872; rcor=793; rNcor=975; rlogoDP=922; rNsEucl=950; rNSW=919; rank_mean=911.800; match_rank= a 0 0 299 65 191 57 4 8 15 1797 351 0 0 0 0 0 c 0 0 428 2037 10 2017 2281 0 15 328 43 0 0 0 0 0 g 0 0 208 68 2038 119 0 2283 2244 13 1863 0 0 0 0 0 t 0 0 1363 128 59 105 13 7 24 160 41 0 0 0 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	Aligned matrices
assembly_15_shift3 (assembly_15)												; assembly_15; m=0 (reference); ncol1=13; shift=3; ncol=16; ---wdwCGGAGAAAww ; Alignment reference a 0 0 0 265 238 231 80 67 52 661 45 690 668 627 268 257 c 0 0 0 139 99 152 500 36 8 14 17 3 8 13 111 131 g 0 0 0 117 178 123 38 564 624 13 635 10 19 34 145 113 t 0 0 0 189 195 204 92 43 26 22 13 7 15 36 186 209
AtGRP7iCLIP_EEAD0145_EEADannot_rc_shift9 (AtGRP7iCLIP:EEAD0145:EEADannot_rc)	0.833	0.448	0.750	0.901	0.932	338	897	898	567	264	592.800	; assembly_15 versus AtGRP7iCLIP_EEAD0145_EEADannot_rc (AtGRP7iCLIP:EEAD0145:EEADannot_rc); m=1/9; ncol2=7; w=0; offset=6; strand=R; shift=9; score= 592.8; ---------aGAAACa ; cor=0.833; Ncor=0.448; logoDP=0.750; NsEucl=0.901; NSW=0.932; rcor=338; rNcor=897; rlogoDP=898; rNsEucl=567; rNSW=264; rank_mean=592.800; match_rank= a 0 0 0 0 0 0 0 0 0 55 4 97 77 77 8 60 c 0 0 0 0 0 0 0 0 0 20 19 1 0 1 77 8 g 0 0 0 0 0 0 0 0 0 13 68 0 11 17 0 15 t 0 0 0 0 0 0 0 0 0 12 9 2 12 5 15 17
Carub.0006s0445.1_TRIHELIX_4_AT5G05550_EEAD0616_EEADannot_shift3 (Carub.0006s0445.1_TRIHELIX_4_AT5G05550:EEAD0616:EEADannot)	0.767	0.472	2.618	0.893	0.909	689	823	703	718	533	693.200	; assembly_15 versus Carub.0006s0445.1_TRIHELIX_4_AT5G05550_EEAD0616_EEADannot (Carub.0006s0445.1_TRIHELIX_4_AT5G05550:EEAD0616:EEADannot); m=2/9; ncol2=8; w=0; offset=0; strand=D; shift=3; score= 693.2; ---CrCCGGMr----- ; cor=0.767; Ncor=0.472; logoDP=2.618; NsEucl=0.893; NSW=0.909; rcor=689; rNcor=823; rlogoDP=703; rNsEucl=718; rNSW=533; rank_mean=693.200; match_rank= a 0 0 0 10 41 6 0 1 2 71 35 0 0 0 0 0 c 0 0 0 73 2 76 100 0 7 28 4 0 0 0 0 0 g 0 0 0 4 56 0 0 99 88 1 60 0 0 0 0 0 t 0 0 0 13 1 18 0 0 3 0 1 0 0 0 0 0
NAC_EEAD0003_EEADannot_rc_shift1 (NAC:EEAD0003:EEADannot_rc)	0.787	0.472	2.827	0.883	0.878	566	821	673	848	865	754.600	; assembly_15 versus NAC_EEAD0003_EEADannot_rc (NAC:EEAD0003:EEADannot_rc); m=3/9; ncol2=11; w=-2; offset=-2; strand=R; shift=1; score= 754.6; -sCTGsmGGAGA---- ; cor=0.787; Ncor=0.472; logoDP=2.827; NsEucl=0.883; NSW=0.878; rcor=566; rNcor=821; rlogoDP=673; rNsEucl=848; rNSW=865; rank_mean=754.600; match_rank= a 0 0 0 0 0 0 50 0 0 100 0 100 0 0 0 0 c 0 50 100 0 0 50 50 0 0 0 0 0 0 0 0 0 g 0 50 0 0 100 50 0 100 100 0 100 0 0 0 0 0 t 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0
At3g14180.DAP_M0777_AthalianaCistrome_shift2 (At3g14180.DAP:M0777:AthalianaCistrome)	0.714	0.510	3.899	0.889	0.876	988	682	529	800	882	776.200	; assembly_15 versus At3g14180.DAP_M0777_AthalianaCistrome (At3g14180.DAP:M0777:AthalianaCistrome); m=4/9; ncol2=11; w=-1; offset=-1; strand=D; shift=2; score= 776.2; --TCrCCGGArAw--- ; cor=0.714; Ncor=0.510; logoDP=3.899; NsEucl=0.889; NSW=0.876; rcor=988; rNcor=682; rlogoDP=529; rNsEucl=800; rNSW=882; rank_mean=776.200; match_rank= a 0 0 33 23 194 11 0 0 0 533 304 418 303 0 0 0 c 0 0 80 490 0 556 598 0 0 32 6 32 90 0 0 0 g 0 0 34 23 404 1 0 598 598 8 273 47 37 0 0 0 t 0 0 451 62 0 30 0 0 0 25 15 101 168 0 0 0
WER_WER_Athamap_rc_shift0 (WER:WER:Athamap_rc)	0.711	0.444	1.276	0.901	0.901	1015	913	808	583	634	790.600	; assembly_15 versus WER_WER_Athamap_rc (WER:WER:Athamap_rc); m=5/9; ncol2=13; w=-3; offset=-3; strand=R; shift=0; score= 790.6; kACwrrcrkwrwA--- ; cor=0.711; Ncor=0.444; logoDP=1.276; NsEucl=0.901; NSW=0.901; rcor=1015; rNcor=913; rlogoDP=808; rNsEucl=583; rNSW=634; rank_mean=790.600; match_rank= a 0 5 0 4 2 3 1 4 0 4 2 4 5 0 0 0 c 0 0 5 0 0 0 4 0 0 0 0 0 0 0 0 0 g 4 1 1 0 4 2 0 2 3 0 4 0 1 0 0 0 t 2 0 0 2 0 1 1 0 3 2 0 2 0 0 0 0
AT3G58630_UN0391.2_JASPAR_shift2 (AT3G58630:UN0391.2:JASPAR)	0.724	0.465	3.388	0.882	0.874	911	839	593	874	901	823.600	; assembly_15 versus AT3G58630_UN0391.2_JASPAR (AT3G58630:UN0391.2:JASPAR); m=6/9; ncol2=10; w=-1; offset=-1; strand=D; shift=2; score= 823.6; --TCGCCGGAGa---- ; cor=0.724; Ncor=0.465; logoDP=3.388; NsEucl=0.882; NSW=0.874; rcor=911; rNcor=839; rlogoDP=593; rNsEucl=874; rNSW=901; rank_mean=823.600; match_rank= a 0 0 97 38 139 29 0 0 0 793 241 575 0 0 0 0 c 0 0 150 804 2 950 1000 0 0 101 27 105 0 0 0 0 g 0 0 59 45 859 0 0 1000 1000 29 701 114 0 0 0 0 t 0 0 694 114 0 22 0 0 0 77 31 207 0 0 0 0
NTL8_MA1678.3_JASPAR_shift7 (NTL8:MA1678.3:JASPAR)	0.728	0.448	5.066	0.865	0.854	897	901	376	1002	1029	841.000	; assembly_15 versus NTL8_MA1678.3_JASPAR (NTL8:MA1678.3:JASPAR); m=7/9; ncol2=8; w=0; offset=4; strand=D; shift=7; score= 841; -------GAAGAAAC- ; cor=0.728; Ncor=0.448; logoDP=5.066; NsEucl=0.865; NSW=0.854; rcor=897; rNcor=901; rlogoDP=376; rNsEucl=1002; rNSW=1029; rank_mean=841.000; match_rank= a 0 0 0 0 0 0 0 64 958 912 8 795 957 933 45 0 c 0 0 0 0 0 0 0 171 5 12 6 79 4 10 850 0 g 0 0 0 0 0 0 0 669 10 42 956 35 3 16 40 0 t 0 0 0 0 0 0 0 78 9 16 12 73 18 23 47 0
ASIL2_MA2039.2_JASPAR_rc_shift2 (ASIL2:MA2039.2:JASPAR_rc)	0.751	0.429	0.631	0.875	0.874	771	956	914	946	905	898.400	; assembly_15 versus ASIL2_MA2039.2_JASPAR_rc (ASIL2:MA2039.2:JASPAR_rc); m=8/9; ncol2=9; w=-1; offset=-1; strand=R; shift=2; score= 898.4; --tCGCCGGAG----- ; cor=0.751; Ncor=0.429; logoDP=0.631; NsEucl=0.875; NSW=0.874; rcor=771; rNcor=956; rlogoDP=914; rNsEucl=946; rNSW=905; rank_mean=898.400; match_rank= a 0 0 174 40 134 31 1 2 6 1168 244 0 0 0 0 0 c 0 0 228 1217 7 1244 1382 0 14 147 33 0 0 0 0 0 g 0 0 144 59 1233 61 2 1391 1367 10 1089 0 0 0 0 0 t 0 0 853 83 25 63 14 6 12 74 33 0 0 0 0 0
ENAP2_MA2040.2_JASPAR_rc_shift2 (ENAP2:MA2040.2:JASPAR_rc)	0.745	0.426	0.611	0.874	0.872	793	975	922	950	919	911.800	; assembly_15 versus ENAP2_MA2040.2_JASPAR_rc (ENAP2:MA2040.2:JASPAR_rc); m=9/9; ncol2=9; w=-1; offset=-1; strand=R; shift=2; score= 911.8; --tCGCCGGAG----- ; cor=0.745; Ncor=0.426; logoDP=0.611; NsEucl=0.874; NSW=0.872; rcor=793; rNcor=975; rlogoDP=922; rNsEucl=950; rNSW=919; rank_mean=911.800; match_rank= a 0 0 299 65 191 57 4 8 15 1797 351 0 0 0 0 0 c 0 0 428 2037 10 2017 2281 0 15 328 43 0 0 0 0 0 g 0 0 208 68 2038 119 0 2283 2244 13 1863 0 0 0 0 0 t 0 0 1363 128 59 105 13 7 24 160 41 0 0 0 0 0

One-to-n matrix alignment; reference matrix: assembly_7_shift0 ; 4 matrices ; sort_field=rank_mean

Matrix name Aligned logos cor Ncor logoDP NsEucl NSW rcor rNcor rlogoDP rNsEucl rNSW rank_mean match_rank Aligned matrices
assembly_7_shift0 (assembly_7)
; assembly_7; m=0 (reference); ncol1=15; shift=0; ncol=15; tyCTCTTCTCcktyw ; Alignment reference a 104 91 37 14 13 18 6 10 14 19 47 92 103 106 129 c 103 129 336 7 429 16 8 430 9 360 313 51 110 142 87 g 67 47 16 8 4 7 11 6 4 8 23 210 90 57 72 t 201 208 86 446 29 434 450 29 448 88 92 122 172 170 187

WER_WER_Athamap_shift5 (WER:WER:Athamap) 0.734 0.408 2.605 0.910 0.918 861 1046 704 396 442 689.800
; assembly_7 versus WER_WER_Athamap (WER:WER:Athamap); m=1/3; ncol2=13; w=0; offset=5; strand=D; shift=5; score= 689.8; -----Twywmygyyw ; cor=0.734; Ncor=0.408; logoDP=2.605; NsEucl=0.910; NSW=0.918; rcor=861; rNcor=1046; rlogoDP=704; rNsEucl=396; rNSW=442; rank_mean=689.800; match_rank= a 0 0 0 0 0 0 2 0 2 3 0 1 1 0 2 c 0 0 0 0 0 1 0 4 0 3 2 0 2 4 0 g 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 t 0 0 0 0 0 5 4 2 4 0 4 1 3 2 4

NAC_EEAD0003_EEADannot_shift6 (NAC:EEAD0003:EEADannot) 0.800 0.423 5.341 0.884 0.880 504 991 325 840 844 700.800
; assembly_7 versus NAC_EEAD0003_EEADannot (NAC:EEAD0003:EEADannot); m=2/3; ncol2=11; w=0; offset=6; strand=D; shift=6; score= 700.8; ------TCTCCksCA ; cor=0.800; Ncor=0.423; logoDP=5.341; NsEucl=0.884; NSW=0.880; rcor=504; rNcor=991; rlogoDP=325; rNsEucl=840; rNSW=844; rank_mean=700.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 c 0 0 0 0 0 0 0 100 0 100 100 0 50 100 0 g 0 0 0 0 0 0 0 0 0 0 0 50 50 0 0 t 0 0 0 0 0 0 100 0 100 0 0 50 0 0 0

KUA1_MA1398.3_JASPAR_shift4 (KUA1:MA1398.3:JASPAR) 0.751 0.401 4.477 0.875 0.876 768 1082 451 940 883 824.800
; assembly_7 versus KUA1_MA1398.3_JASPAR (KUA1:MA1398.3:JASPAR); m=3/3; ncol2=8; w=0; offset=4; strand=D; shift=4; score= 824.8; ----CTTATCCa--- ; cor=0.751; Ncor=0.401; logoDP=4.477; NsEucl=0.875; NSW=0.876; rcor=768; rNcor=1082; rlogoDP=451; rNsEucl=940; rNSW=883; rank_mean=824.800; match_rank= a 0 0 0 0 69 127 107 1751 14 15 35 943 0 0 0 c 0 0 0 0 1567 61 40 29 14 1771 1502 102 0 0 0 g 0 0 0 0 112 18 41 11 9 17 27 335 0 0 0 t 0 0 0 0 69 1611 1629 26 1780 14 253 437 0 0 0

Matrix name	cor	Ncor	logoDP	NsEucl	NSW	rcor	rNcor	rlogoDP	rNsEucl	rNSW	rank_mean	Aligned matrices
assembly_7_shift0 (assembly_7)												; assembly_7; m=0 (reference); ncol1=15; shift=0; ncol=15; tyCTCTTCTCcktyw ; Alignment reference a 104 91 37 14 13 18 6 10 14 19 47 92 103 106 129 c 103 129 336 7 429 16 8 430 9 360 313 51 110 142 87 g 67 47 16 8 4 7 11 6 4 8 23 210 90 57 72 t 201 208 86 446 29 434 450 29 448 88 92 122 172 170 187
WER_WER_Athamap_shift5 (WER:WER:Athamap)	0.734	0.408	2.605	0.910	0.918	861	1046	704	396	442	689.800	; assembly_7 versus WER_WER_Athamap (WER:WER:Athamap); m=1/3; ncol2=13; w=0; offset=5; strand=D; shift=5; score= 689.8; -----Twywmygyyw ; cor=0.734; Ncor=0.408; logoDP=2.605; NsEucl=0.910; NSW=0.918; rcor=861; rNcor=1046; rlogoDP=704; rNsEucl=396; rNSW=442; rank_mean=689.800; match_rank= a 0 0 0 0 0 0 2 0 2 3 0 1 1 0 2 c 0 0 0 0 0 1 0 4 0 3 2 0 2 4 0 g 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 t 0 0 0 0 0 5 4 2 4 0 4 1 3 2 4
NAC_EEAD0003_EEADannot_shift6 (NAC:EEAD0003:EEADannot)	0.800	0.423	5.341	0.884	0.880	504	991	325	840	844	700.800	; assembly_7 versus NAC_EEAD0003_EEADannot (NAC:EEAD0003:EEADannot); m=2/3; ncol2=11; w=0; offset=6; strand=D; shift=6; score= 700.8; ------TCTCCksCA ; cor=0.800; Ncor=0.423; logoDP=5.341; NsEucl=0.884; NSW=0.880; rcor=504; rNcor=991; rlogoDP=325; rNsEucl=840; rNSW=844; rank_mean=700.800; match_rank= a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 c 0 0 0 0 0 0 0 100 0 100 100 0 50 100 0 g 0 0 0 0 0 0 0 0 0 0 0 50 50 0 0 t 0 0 0 0 0 0 100 0 100 0 0 50 0 0 0
KUA1_MA1398.3_JASPAR_shift4 (KUA1:MA1398.3:JASPAR)	0.751	0.401	4.477	0.875	0.876	768	1082	451	940	883	824.800	; assembly_7 versus KUA1_MA1398.3_JASPAR (KUA1:MA1398.3:JASPAR); m=3/3; ncol2=8; w=0; offset=4; strand=D; shift=4; score= 824.8; ----CTTATCCa--- ; cor=0.751; Ncor=0.401; logoDP=4.477; NsEucl=0.875; NSW=0.876; rcor=768; rNcor=1082; rlogoDP=451; rNsEucl=940; rNSW=883; rank_mean=824.800; match_rank= a 0 0 0 0 69 127 107 1751 14 15 35 943 0 0 0 c 0 0 0 0 1567 61 40 29 14 1771 1502 102 0 0 0 g 0 0 0 0 112 18 41 11 9 17 27 335 0 0 0 t 0 0 0 0 69 1611 1629 26 1780 14 253 437 0 0 0