; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/03/19/oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/03/19/oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/03/19/oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/03/19/oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/03/19/oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	48	56	87	86	27	32	23	29	79	99	29	89	20	93	25	28	24	94	31	32	89	99	100	23	107	106	97	94	31	46	96	36	90	93	32	39	50	55
c	22	16	8	17	6	10	5	5	10	7	6	9	5	9	7	6	6	4	3	7	4	10	8	7	5	6	3	8	7	5	8	13	9	11	8	8	19	16
g	14	18	11	4	14	3	6	7	9	11	7	5	10	7	6	4	8	13	2	5	12	4	6	6	4	8	5	11	14	9	9	12	8	6	7	13	17	14
t	52	46	30	29	89	91	102	95	38	19	94	33	101	27	98	98	98	25	100	92	31	23	22	100	20	16	31	23	84	76	23	75	29	26	89	76	50	51
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m1_rc.png
;
a	116	102	300	16	320	21	25	7	25	12	87	105
c	67	71	18	288	1	283	7	8	7	6	76	48
g	48	76	6	7	8	7	283	1	288	18	71	67
t	105	87	12	25	7	25	21	320	16	300	102	116
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m2_rc.png
;
a	6	5	11	2	10	1	8	3	11	2	9	2	12	11	15	3	14	11	2	11	0	2	2	13	3	1	10	10	1	2	6	2	11	4	6	3	4	6	5	6
c	1	1	0	8	2	5	1	0	1	0	2	0	0	0	1	0	1	1	2	1	0	0	1	0	0	1	2	1	0	0	0	1	1	5	0	0	2	1	3	3
g	1	6	2	0	1	0	3	2	0	1	2	0	0	1	0	0	0	0	1	1	3	1	1	1	1	0	1	0	2	3	1	0	2	4	5	1	7	3	1	2
t	8	4	3	6	3	10	4	11	4	13	3	14	4	4	0	13	1	4	11	3	13	13	12	2	12	14	3	5	13	11	9	13	2	3	5	12	3	6	7	5
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m3_rc.png
;
a	110	177	83	246	97	292	30	301	42	167	43	317	37	162	181	320	35	315	170	317	51	310	47	305	29	185	82	221	107	166
c	51	40	33	26	89	18	18	15	13	12	19	15	13	12	24	9	14	8	24	14	14	14	27	9	13	26	24	27	29	44
g	34	52	29	29	19	23	9	18	11	18	11	13	14	20	13	15	19	16	13	14	5	21	11	17	13	91	24	38	50	53
t	182	108	232	76	172	44	320	43	311	180	304	32	313	183	159	33	309	38	170	32	307	32	292	46	322	75	247	91	191	114
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m4_rc.png
;
a	39	43	35	52	68	71	23	34	65	22	60	65	19	27	13	23	60	63	18	75	26	74	22	21	16	73	19	21	65	70	76	77	79	26	71	73	67	31	32	62	37	48	41	36
c	11	13	10	13	3	6	7	4	10	10	5	7	5	2	4	4	9	10	6	3	5	5	1	4	8	6	3	4	5	6	5	8	3	4	4	4	3	5	13	8	11	11	14	11
g	11	9	17	10	8	4	7	10	5	9	9	7	9	7	4	4	5	6	6	3	4	5	4	7	4	5	3	6	7	4	4	4	2	4	9	4	5	3	26	1	10	6	12	13
t	39	35	38	25	21	19	63	52	20	59	26	21	67	64	79	69	26	21	70	19	65	16	73	68	72	16	75	69	23	20	15	11	16	66	16	19	25	61	29	29	42	35	33	40
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m5_rc.png
;
a	21	16	22	25	16	8	41	11	38	4	38	42	46	9	43	42	5	41	6	7	9	38	8	4	32	32	10	9	26	10	39	17	20	7	13	19	20	15
c	1	10	6	6	18	7	1	4	5	2	3	0	3	2	3	3	6	2	2	3	3	4	2	2	5	4	3	1	5	3	5	20	1	2	5	6	7	7
g	7	5	4	3	3	5	1	4	7	3	3	3	3	4	2	1	7	1	5	1	3	2	2	3	5	6	3	5	6	3	4	5	13	5	19	5	9	9
t	25	23	22	20	17	34	11	35	4	45	10	9	2	39	6	8	36	10	41	43	39	10	42	45	12	12	38	39	17	38	6	12	20	40	17	24	18	23
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m6_rc.png
;
a	80	96	60	126	76	54	136	174	31	172	145	171	37	177	29	177	28	53	41	173	32	42	151	153	38	60	146	51	144	161	55	82	100
c	31	20	25	16	41	14	19	11	11	12	17	9	12	7	5	8	11	11	8	8	12	10	19	12	14	19	16	16	9	10	17	28	24
g	30	31	17	15	28	20	20	11	10	14	9	17	9	10	11	14	10	15	8	13	8	15	13	16	17	12	16	21	22	13	12	30	23
t	89	83	128	73	85	142	55	34	178	32	59	33	172	36	185	31	181	151	173	36	178	163	47	49	161	139	52	142	55	46	146	90	83
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m7_rc.png
;
a	50	37	79	14	115	14	10	2	120	9	20	6	17	25	40	39
c	18	30	18	94	3	89	4	5	1	105	5	4	3	6	21	21
g	21	21	6	3	4	5	105	1	5	4	89	3	94	18	30	18
t	39	40	25	17	6	20	9	120	2	10	14	115	14	79	37	50
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m8_rc.png
;
a	29	31	30	17	11	12	61	18	20	11	62	71	21	73	63	65	23	65	19	58	17	25	55	72	67	54	15	21	57	16	56	55	18	16	17	10	62	27	29	36
c	9	16	9	5	3	5	7	5	2	6	6	4	7	3	4	5	6	4	4	7	9	4	4	4	2	11	9	6	4	9	8	6	6	5	4	11	3	18	9	14
g	5	4	10	4	2	3	1	7	5	4	4	3	4	4	3	6	3	5	0	5	4	2	2	3	5	4	9	9	4	5	9	9	9	3	5	8	8	10	14	7
t	47	39	41	64	74	70	21	60	63	69	18	12	58	10	20	14	58	16	67	20	60	59	29	11	16	21	57	54	25	60	17	20	57	66	64	61	17	35	38	33
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m9_rc.png
;
a	94	108	80	144	102	61	35	205	38	71	42	210	44	223	61	224	208	224	60	217	215	70	208	66	65	207	208	60	69	185	83	109	88
c	30	26	37	24	52	17	8	8	13	14	17	11	21	13	15	14	10	12	17	16	11	11	20	16	16	15	10	16	18	18	16	44	36
g	35	39	21	30	27	14	19	18	11	15	15	25	19	20	16	17	16	17	17	14	15	15	17	23	20	15	20	15	21	27	14	43	42
t	141	127	162	102	119	208	238	69	238	200	226	54	216	44	208	45	66	47	206	53	59	204	55	195	199	63	62	209	192	70	187	104	134
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m10_rc.png
;
a	119	176	153	244	78	303	55	288	32	300	33	163	36	295	32	152	180	307	35	305	182	304	48	308	42	173	85	225	115	178
c	52	49	38	21	88	13	13	12	21	7	14	13	9	18	9	12	16	12	11	10	14	13	10	10	22	23	26	30	44	33
g	45	34	27	20	27	13	10	22	12	14	16	19	13	18	10	21	13	9	17	10	12	15	16	20	17	82	23	31	42	38
t	151	108	149	82	174	38	289	45	302	46	304	172	309	36	316	182	158	39	304	42	159	35	293	29	286	89	233	81	166	118
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m11_rc.png
;
a	195	284	93	448	100	223	343	493	70	475	321	488	88	502	65	478	58	233	72	463	58	183	145	376	180	270
c	81	72	36	29	38	31	40	17	18	21	25	19	35	28	23	19	14	22	16	23	22	26	131	41	67	75
g	59	64	29	29	35	38	23	26	16	23	17	24	19	23	16	23	17	25	27	32	27	34	59	48	57	65
t	269	184	446	98	431	312	198	68	500	85	241	73	462	51	500	84	515	324	489	86	497	361	269	139	300	194
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m12_rc.png
;
a	29	26	25	34	12	21	51	56	13	55	53	56	15	56	12	53	15	18	9	61	10	12	44	57	54	54	12	26	51	13	48	52	12	18	14	19	53	49	31	30	29	30
c	4	9	13	6	6	8	4	1	4	8	7	3	9	3	5	5	2	2	0	5	5	5	5	3	0	3	8	5	1	4	9	5	5	4	7	6	5	6	11	6	4	7
g	10	14	9	10	7	4	4	3	12	3	2	4	3	6	6	6	3	1	3	2	0	6	3	4	4	1	9	1	4	5	3	4	9	4	1	8	2	7	9	8	10	13
t	33	27	29	26	51	43	17	16	47	10	14	13	49	11	53	12	56	55	64	8	61	53	24	12	18	18	47	44	20	54	16	15	50	50	54	43	16	14	25	32	33	26
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m13_rc.png
;
a	45	41	47	93	94	91	101	26	99	83	103	34	44	80	103	25	109	23	91	23	34	22	85	23	22	77	33	76	97	27	24	25	33	85	79	94	81	79	52	51
c	17	19	33	2	5	3	9	7	4	7	5	3	8	11	1	12	3	9	6	5	3	10	11	10	9	11	10	10	11	10	7	9	7	9	9	8	11	13	11	14
g	25	23	12	9	9	7	7	8	7	4	6	10	5	6	10	11	2	4	6	6	10	7	10	5	11	8	13	6	11	6	12	7	7	12	13	9	6	6	15	22
t	43	47	38	26	22	29	13	89	20	36	16	83	73	33	16	82	16	94	27	96	83	91	24	92	88	34	74	38	11	87	87	89	83	24	29	19	32	32	52	43
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m14_rc.png
;
a	111	156	80	228	89	275	25	285	37	144	37	286	33	143	184	299	41	292	182	290	48	291	43	275	40	153	153	150	148	148	119
c	45	41	34	22	85	14	15	12	9	12	14	18	10	13	21	9	17	9	19	20	17	11	22	12	14	27	25	23	23	41	37
g	32	45	29	28	17	18	10	11	11	13	9	12	10	15	13	9	18	10	13	13	7	20	17	16	14	87	30	34	37	50	42
t	167	113	212	77	164	48	305	47	298	186	295	39	302	184	137	38	279	44	141	32	283	33	273	52	287	88	147	148	147	116	157
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m15_rc.png
;
a	26	22	25	17	45	19	16	11	42	18	43	41	19	13	43	42	9	45	46	47	9	40	10	6	44	4	14	9	44	3	39	12	44	15	34	13	29	21
c	9	8	6	21	4	19	7	6	3	4	7	6	3	6	3	5	3	3	2	5	3	6	1	4	4	3	3	2	4	7	5	0	4	3	2	7	4	8
g	6	7	5	4	3	2	18	4	6	3	3	3	3	5	4	1	2	2	2	1	2	4	2	4	2	4	1	3	4	5	3	2	6	17	8	4	11	1
t	18	22	23	17	7	19	18	38	8	34	6	9	34	35	9	11	45	9	9	6	45	9	46	45	9	48	41	45	7	44	12	45	5	24	15	35	15	29
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m16_rc.png
;
a	24	19	32	30	21	9	44	14	44	6	42	42	48	10	44	41	5	42	5	11	9	41	8	7	28	33	10	6	29	10	41	17	23	6	14	16	23	18
c	2	8	7	6	17	8	1	1	4	4	3	2	3	2	3	4	6	2	1	1	2	4	2	4	6	5	3	2	3	3	3	19	0	2	5	7	6	5
g	7	6	4	2	2	6	2	3	3	2	2	3	4	1	4	2	4	2	6	2	2	2	4	3	6	7	3	6	6	3	7	7	15	6	22	9	8	11
t	24	24	14	19	17	34	10	39	6	45	10	10	2	44	6	10	42	11	45	43	44	10	43	43	17	12	41	43	19	41	6	14	19	43	16	25	20	23
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/03/19//oligo-analysis_2026-03-19.154439_RQU4FE_pssm_count_matrices_logo_m17_rc.png
;
; Host name	rsat
; Job started	2026-03-19.154457
; Job done	2026-03-19.154504
; Seconds	0.37
;	user	0.37
;	system	0.17
;	cuser	5.59
;	csystem	0.76