/var/www/html/rsat/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/reports/peak-motifs_timelog.txt


start_time done_time elapsed seconds task prefix file
2026-03-19.185614 2026-03-19.185614 NA 0.13 1nt_test_profiles peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/composition/peak-motifs_test_profiles-1str-ovlp_1nt_ci20.tab
NA NA NA NA 1nt_test_freq peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/composition/peak-motifs_test_freq-1str-ovlp_1nt.tab
2026-03-19.185615 2026-03-19.185615 NA 0.12 2nt_test_profiles peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
NA NA NA NA 2nt_test_freq peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/composition/peak-motifs_test_freq-1str-ovlp_2nt.tab
2026-03-19.185633 2026-03-19.185634 NA 0.1 positions_6nt_2pssm peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_log.txt
2026-03-19.185632 2026-03-19.185632 NA 0.31 positions_6nt peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50.tab
2026-03-19.185635 2026-03-19.185635 NA 0.09 positions_7nt_2pssm peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_log.txt
2026-03-19.185634 2026-03-19.185634 NA 0.42 positions_7nt peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50.tab
2026-03-19.185629 2026-03-19.185632 NA 0.09 dyads_2pssm peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/dyads/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_log.txt
2026-03-19.185626 2026-03-19.185629 NA 3.39 dyads peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/dyads/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads.tab
2026-03-19.185637 2026-03-19.185646 NA 0.4 motifs_disco_compa peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab
2026-03-19.185657 2026-03-19.185701 NA 0.32 motifs_vs_db_regulonDB peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/discovered_vs_db/peak-motifs_motifs_vs_db_regulonDB.tab
NA NA NA NA motifs_vs_db_regulonDB_tf_$RSAT/public_html/motif_databases/REGULONDB/regulonDB_2025-05.tf_-task_purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,motifs_vs_db_-prefix_peak-motifs_-noov_-img_format_png__-outdir_$RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq_|_perl_-pe_'s|$RSAT/(public_html/)*||g'_>>_$RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/peak-motifs_synthesis.html;_echo_'[RSAT]_peak-motifs_2026-03-19.185612___Command:_nice_-n_19_$RSAT/perl-scripts/peak-motifs__-v_1_-title_'Fis_RegulonDB_sites'__-i_$RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/peak-motifspeak_seq_-markov_auto_-disco_oligos,dyads,positions_-nmotifs_5__-minol_6_-maxol_7__-no_merge_lengths_-2str__-origin_center__-motif_db_regulonDB_tf_$RSAT/public_html/motif_databases/REGULONDB/regulonDB_2015-08-07.tf_-motif_db_regulonDB peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/discovered_vs_db/peak-motifs_motifs_vs_db_regulonDB_tf_$RSAT/public_html/motif_databases/REGULONDB/regulonDB_2025-05.tf_-task_purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,motifs_vs_db_-prefix_peak-motifs_-noov_-img_format_png__-outdir_$RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq_|_perl_-pe_'s|$RSAT/(public_html/)*||g'_>>_$RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/peak-motifs_synthesis.html;_echo_'[RSAT]_peak-motifs_2026-03-19.185612___Command:_nice_-n_19_$RSAT/perl-scripts/peak-motifs__-v_1_-title_'Fis_RegulonDB_sites'__-i_$RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/peak-motifspeak_seq_-markov_auto_-disco_oligos,dyads,positions_-nmotifs_5__-minol_6_-maxol_7__-no_merge_lengths_-2str__-origin_center__-motif_db_regulonDB_tf_$RSAT/public_html/motif_databases/REGULONDB/regulonDB_2015-08-07.tf_-motif_db_regulonDB.tab
2026-03-19.185614 2026-03-19.185614 NA 0.13 1nt_test_profiles peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/composition/peak-motifs_test_profiles-1str-ovlp_1nt_ci20.tab
NA NA NA NA 1nt_test_freq peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/composition/peak-motifs_test_freq-1str-ovlp_1nt.tab
2026-03-19.185615 2026-03-19.185615 NA 0.12 2nt_test_profiles peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
NA NA NA NA 2nt_test_freq peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/composition/peak-motifs_test_freq-1str-ovlp_2nt.tab
2026-03-19.185619 2026-03-19.185621 NA 0.08 oligos_6nt_mkv1_2pssm peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/oligos_6nt_mkv1/peak-motifs_oligos-2str-noov_6nt_mkv1_pssm_log.txt
2026-03-19.185618 2026-03-19.185619 NA 0.38 oligos_6nt_mkv1 peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/oligos_6nt_mkv1/peak-motifs_oligos-2str-noov_6nt_mkv1.tab
2026-03-19.185633 2026-03-19.185634 NA 0.1 positions_6nt_2pssm peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_log.txt
2026-03-19.185632 2026-03-19.185632 NA 0.31 positions_6nt peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50.tab
2026-03-19.185622 2026-03-19.185626 NA 0.08 oligos_7nt_mkv1_2pssm peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_log.txt
2026-03-19.185622 2026-03-19.185622 NA 0.63 oligos_7nt_mkv1 peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1.tab
2026-03-19.185635 2026-03-19.185635 NA 0.09 positions_7nt_2pssm peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_log.txt
2026-03-19.185634 2026-03-19.185634 NA 0.42 positions_7nt peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50.tab
2026-03-19.185629 2026-03-19.185632 NA 0.09 dyads_2pssm peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/dyads/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_log.txt
2026-03-19.185626 2026-03-19.185629 NA 3.39 dyads peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/dyads/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads.tab
2026-03-19.185637 2026-03-19.185646 NA 0.4 motifs_disco_compa peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab
2026-03-19.185657 2026-03-19.185701 NA 0.32 motifs_vs_db_regulonDB peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/discovered_vs_db/peak-motifs_motifs_vs_db_regulonDB.tab
NA NA NA NA motifs_vs_db_regulonDB_tf_$RSAT/public_html/motif_databases/REGULONDB/regulonDB_2025-05.tf_-task_purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,motifs_vs_db_-prefix_peak-motifs_-noov_-img_format_png__-outdir_$RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq_|_perl_-pe_'s|$RSAT/(public_html/)*||g'_>>_$RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/peak-motifs_synthesis.html;_echo_'[RSAT]_peak-motifs_2026-03-19.185612___Command:_nice_-n_19_$RSAT/perl-scripts/peak-motifs__-v_1_-title_'Fis_RegulonDB_sites'__-i_$RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/peak-motifspeak_seq_-markov_auto_-disco_oligos,dyads,positions_-nmotifs_5__-minol_6_-maxol_7__-no_merge_lengths_-2str__-origin_center__-motif_db_regulonDB_tf_$RSAT/public_html/motif_databases/REGULONDB/regulonDB_2015-08-07.tf_-motif_db_regulonDB peak-motifs $RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/results/discovered_vs_db/peak-motifs_motifs_vs_db_regulonDB_tf_$RSAT/public_html/motif_databases/REGULONDB/regulonDB_2025-05.tf_-task_purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,motifs_vs_db_-prefix_peak-motifs_-noov_-img_format_png__-outdir_$RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq_|_perl_-pe_'s|$RSAT/(public_html/)*||g'_>>_$RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/peak-motifs_synthesis.html;_echo_'[RSAT]_peak-motifs_2026-03-19.185612___Command:_nice_-n_19_$RSAT/perl-scripts/peak-motifs__-v_1_-title_'Fis_RegulonDB_sites'__-i_$RSAT/public_html/tmp/www-data/2026/03/19/peak-motifs.2026-03-19.185612_2026-03-19.185612_KDREbq/peak-motifspeak_seq_-markov_auto_-disco_oligos,dyads,positions_-nmotifs_5__-minol_6_-maxol_7__-no_merge_lengths_-2str__-origin_center__-motif_db_regulonDB_tf_$RSAT/public_html/motif_databases/REGULONDB/regulonDB_2015-08-07.tf_-motif_db_regulonDB.tab