/var/www/html/rsat/public_html/tmp/www-data/2026/03/24/peak-motifs.2026-03-24.173120_2026-03-24.173120_dVE4vB/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab 
 position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2026/03/24/peak-motifs.2026-03-24.173120_2026-03-24.173120_dVE4vB/data/sequences/peak-motifs_test_maxlen600_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 2 -ci 20 -img_format png -title ewg -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2026/03/24/peak-motifs.2026-03-24.173120_2026-03-24.173120_dVE4vB/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Citation: van Helden, et al. (2000).  Nucleic Acids Res 28, 1000-1010.
 Sequence file                	$RSAT/public_html/tmp/www-data/2026/03/24/peak-motifs.2026-03-24.173120_2026-03-24.173120_dVE4vB/data/sequences/peak-motifs_test_maxlen600_purged_ml40_mis3.fasta
 Sequence format              	fasta
 Sequence type                	dna
 Output file                  	$RSAT/public_html/tmp/www-data/2026/03/24/peak-motifs.2026-03-24.173120_2026-03-24.173120_dVE4vB/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Oligo length                 	2
 Occurrences counted  on a single  strands
 Conditions of applicability checked.
 Background model estimation: homogeneous repartition
 Sequence statistics:
	Nb of sequences              	1117
	Sum of sequence lengths      	335100
	Min sequence length          	0
	Max sequence length          	300
	Average sequence length      	300
	Possible positions           	333983
 Oligonucleotide statistics:
	Total occurrences    	311470
 Position interval parameters:
	Position interval    	20
	Number of windows    	16
	Total positions      	333983
	Degrees of freedom   	15
 K-mer clustering parameters:
	Number of clusters   	0
	Clustering method    	complete
 Position intervals:
	window	[min,max]	mid	seq	occ
	1	-8	[-159,-140]	-149.5	1117	11170
	2	-7	[-139,-120]	-129.5	1117	22340
	3	-6	[-119,-100]	-109.5	1117	22340
	4	-5	[-99,-80]	-89.5	1117	22340
	5	-4	[-79,-60]	-69.5	1117	22340
	6	-3	[-59,-40]	-49.5	1117	22340
	7	-2	[-39,-20]	-29.5	1117	22340
	8	-1	[-19,0]	-9.5	1117	22340
	9	0	[1,20]	10.5	1117	22340
	10	1	[21,40]	30.5	1117	22340
	11	2	[41,60]	50.5	1117	22340
	12	3	[61,80]	70.5	1117	22340
	13	4	[81,100]	90.5	1117	22340
	14	5	[101,120]	110.5	1117	22340
	15	6	[121,140]	130.5	1117	22340
	16	7	[141,160]	150.5	1117	10053

 Column headers
	1	seq            	pattern sequence
	2	id             	pattern identifier
	3	occ            	pattern occurrences
	4	chi2           	observed chi-square
	5	df             	degrees of freedom
	6	Pval           	P-value (probability for one word to be a false positive)
	7	Eval           	E-value; expected number of false positives (Eval = Pval * nb_tests)
	8	sig            	Significance (sig = -log10(Eval))
	9	rank           	rank of the pattern according to sorting criterion
	10	-149.5         	occurrences in window	1	[-159,-140]
	11	-129.5         	occurrences in window	2	[-139,-120]
	12	-109.5         	occurrences in window	3	[-119,-100]
	13	-89.5          	occurrences in window	4	[-99,-80]
	14	-69.5          	occurrences in window	5	[-79,-60]
	15	-49.5          	occurrences in window	6	[-59,-40]
	16	-29.5          	occurrences in window	7	[-39,-20]
	17	-9.5           	occurrences in window	8	[-19,0]
	18	10.5           	occurrences in window	9	[1,20]
	19	30.5           	occurrences in window	10	[21,40]
	20	50.5           	occurrences in window	11	[41,60]
	21	70.5           	occurrences in window	12	[61,80]
	22	90.5           	occurrences in window	13	[81,100]
	23	110.5          	occurrences in window	14	[101,120]
	24	130.5          	occurrences in window	15	[121,140]
	25	150.5          	occurrences in window	16	[141,160]
seq id occ chi2 df Pval Eval sig rank -149.5 -129.5 -109.5 -89.5 -69.5 -49.5 -29.5 -9.5 10.5 30.5 50.5 70.5 90.5 110.5 130.5 150.5
ta ta 19899 66.1 15 2.2e-08 3.6e-07 6.45 1 578 1272 1273 1301 1335 1388 1430 1453 1387 1411 1407 1321 1251 1230 1261 601
cc cc 14011 53.9 15 2.8e-06 4.4e-05 4.35 2 441 927 939 870 928 857 883 904 896 907 976 1000 1076 975 1008 424
tt tt 31298 49.8 15 1.3e-05 0.00021 3.68 3 934 2014 1943 2052 2090 2132 2138 2182 2180 2163 2191 2162 2097 2104 2021 895
gg gg 14545 47.0 15 3.7e-05 0.00059 3.23 4 491 897 1048 1026 946 983 940 867 962 992 905 1003 968 994 1019 504
at at 24696 42.9 15 1.6e-04 0.0026 2.59 5 766 1650 1605 1588 1639 1685 1741 1801 1668 1723 1714 1636 1565 1608 1568 739
gt gt 16635 28.5 15 1.9e-02 0.3 0.52 6 544 1081 1141 1054 1078 1092 1128 1104 1113 1032 1105 1101 1134 1201 1181 546
ca ca 21097 27.2 15 2.7e-02 0.44 0.36 7 791 1436 1383 1429 1451 1322 1337 1419 1369 1383 1406 1438 1430 1449 1440 614
tc tc 17143 26.6 15 3.2e-02 0.51 0.29 8 553 1184 1104 1157 1164 1107 1146 1225 1083 1078 1174 1100 1166 1154 1186 562
aa aa 31240 24.7 15 5.5e-02 0.88 0.06 9 1054 2043 2065 2024 2133 2180 2237 2044 2083 2065 2134 2042 2072 2051 2111 902
gc gc 18195 23.4 15 7.6e-02 1.2 -0.08 10 659 1195 1226 1199 1187 1218 1135 1218 1252 1243 1162 1256 1279 1262 1172 532
ga ga 17205 21.4 15 1.2e-01 2 -0.30 11 594 1169 1142 1195 1130 1180 1203 1078 1170 1209 1109 1123 1097 1106 1184 516
tg tg 21366 20.8 15 1.4e-01 2.3 -0.36 12 694 1390 1455 1355 1367 1427 1420 1421 1462 1442 1381 1446 1483 1530 1445 648
ct ct 17107 17.8 15 2.7e-01 4.4 -0.64 13 521 1107 1089 1172 1171 1150 1123 1191 1159 1156 1142 1141 1206 1104 1142 533
ac ac 16388 17.6 15 2.8e-01 4.6 -0.66 14 599 1084 1083 1133 1113 1026 1039 1060 1111 1098 1131 1119 1084 1093 1109 506
cg cg 13495 13.9 15 5.3e-01 8.5 -0.93 15 477 941 922 914 833 899 865 888 894 891 880 923 900 939 913 416
ag ag 17150 12.4 15 6.5e-01 10 -1.02 16 598 1140 1125 1184 1173 1193 1155 1092 1171 1153 1123 1110 1115 1120 1177 521 
 Host name	rsat
 Job started	2026-03-24.173124
 Job done	2026-03-24.173126
 Seconds	2.04
	user	2.04
	system	0.02
	cuser	0
;	csystem	0