position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2026/03/24/peak-motifs.2026-03-24.175732_2026-03-24.175732_d4HBn3/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 1 -ci 20 -img_format png -title Ets97D -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2026/03/24/peak-motifs.2026-03-24.175732_2026-03-24.175732_d4HBn3/results/composition/peak-motifs_test_profiles-1str-ovlp_1nt_ci20.tab Citation: van Helden, et al. (2000). Nucleic Acids Res 28, 1000-1010. Sequence file $RSAT/public_html/tmp/www-data/2026/03/24/peak-motifs.2026-03-24.175732_2026-03-24.175732_d4HBn3/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta Sequence format fasta Sequence type dna Output file $RSAT/public_html/tmp/www-data/2026/03/24/peak-motifs.2026-03-24.175732_2026-03-24.175732_d4HBn3/results/composition/peak-motifs_test_profiles-1str-ovlp_1nt_ci20.tab Oligo length 1 Occurrences counted on a single strands Conditions of applicability checked. Background model estimation: homogeneous repartition Sequence statistics: Nb of sequences 302 Sum of sequence lengths 90600 Min sequence length 0 Max sequence length 300 Average sequence length 300 Possible positions 90600 Oligonucleotide statistics: Total occurrences 84433 Position interval parameters: Position interval 20 Number of windows 16 Total positions 90600 Degrees of freedom 15 K-mer clustering parameters: Number of clusters 0 Clustering method complete Position intervals: window [min,max] mid seq occ 1 -8 [-159,-140] -149.5 302 3020 2 -7 [-139,-120] -129.5 302 6040 3 -6 [-119,-100] -109.5 302 6040 4 -5 [-99,-80] -89.5 302 6040 5 -4 [-79,-60] -69.5 302 6040 6 -3 [-59,-40] -49.5 302 6040 7 -2 [-39,-20] -29.5 302 6040 8 -1 [-19,0] -9.5 302 6040 9 0 [1,20] 10.5 302 6040 10 1 [21,40] 30.5 302 6040 11 2 [41,60] 50.5 302 6040 12 3 [61,80] 70.5 302 6040 13 4 [81,100] 90.5 302 6040 14 5 [101,120] 110.5 302 6040 15 6 [121,140] 130.5 302 6040 16 7 [141,160] 150.5 302 3020 Column headers 1 seq pattern sequence 2 id pattern identifier 3 occ pattern occurrences 4 chi2 observed chi-square 5 df degrees of freedom 6 Pval P-value (probability for one word to be a false positive) 7 Eval E-value; expected number of false positives (Eval = Pval * nb_tests) 8 sig Significance (sig = -log10(Eval)) 9 rank rank of the pattern according to sorting criterion 10 -149.5 occurrences in window 1 [-159,-140] 11 -129.5 occurrences in window 2 [-139,-120] 12 -109.5 occurrences in window 3 [-119,-100] 13 -89.5 occurrences in window 4 [-99,-80] 14 -69.5 occurrences in window 5 [-79,-60] 15 -49.5 occurrences in window 6 [-59,-40] 16 -29.5 occurrences in window 7 [-39,-20] 17 -9.5 occurrences in window 8 [-19,0] 18 10.5 occurrences in window 9 [1,20] 19 30.5 occurrences in window 10 [21,40] 20 50.5 occurrences in window 11 [41,60] 21 70.5 occurrences in window 12 [61,80] 22 90.5 occurrences in window 13 [81,100] 23 110.5 occurrences in window 14 [101,120] 24 130.5 occurrences in window 15 [121,140] 25 150.5 occurrences in window 16 [141,160]
| seq | id | occ | chi2 | df | Pval | Eval | sig | rank | -149.5 | -129.5 | -109.5 | -89.5 | -69.5 | -49.5 | -29.5 | -9.5 | 10.5 | 30.5 | 50.5 | 70.5 | 90.5 | 110.5 | 130.5 | 150.5 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| g | g | 17545 | 24.4 | 15 | 5.9e-02 | 0.23 | 0.63 | 1 | 590 | 1105 | 1198 | 1136 | 1220 | 1172 | 1214 | 1184 | 1262 | 1167 | 1141 | 1169 | 1140 | 1129 | 1105 | 613 |
| t | t | 24834 | 21.8 | 15 | 1.1e-01 | 0.45 | 0.35 | 2 | 816 | 1716 | 1637 | 1616 | 1589 | 1611 | 1601 | 1586 | 1700 | 1659 | 1639 | 1664 | 1711 | 1745 | 1705 | 839 |
| a | a | 24644 | 18.8 | 15 | 2.2e-01 | 0.89 | 0.05 | 3 | 824 | 1615 | 1588 | 1620 | 1651 | 1698 | 1664 | 1672 | 1529 | 1665 | 1708 | 1621 | 1675 | 1668 | 1657 | 789 |
| c | c | 17410 | 17.2 | 15 | 3.1e-01 | 1.2 | -0.09 | 4 | 556 | 1124 | 1137 | 1188 | 1116 | 1116 | 1132 | 1180 | 1149 | 1177 | 1192 | 1226 | 1154 | 1138 | 1216 | 609 |
Host name rsat Job started 2026-03-24.175734 Job done 2026-03-24.175734 Seconds 0.54 user 0.54 system 0.01 cuser 0 ; csystem 0