/var/www/html/rsat/public_html/tmp/www-data/2026/03/24/peak-motifs.2026-03-24.175732_2026-03-24.175732_d4HBn3/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab 
 position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2026/03/24/peak-motifs.2026-03-24.175732_2026-03-24.175732_d4HBn3/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 2 -ci 20 -img_format png -title Ets97D -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2026/03/24/peak-motifs.2026-03-24.175732_2026-03-24.175732_d4HBn3/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Citation: van Helden, et al. (2000).  Nucleic Acids Res 28, 1000-1010.
 Sequence file                	$RSAT/public_html/tmp/www-data/2026/03/24/peak-motifs.2026-03-24.175732_2026-03-24.175732_d4HBn3/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta
 Sequence format              	fasta
 Sequence type                	dna
 Output file                  	$RSAT/public_html/tmp/www-data/2026/03/24/peak-motifs.2026-03-24.175732_2026-03-24.175732_d4HBn3/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Oligo length                 	2
 Occurrences counted  on a single  strands
 Conditions of applicability checked.
 Background model estimation: homogeneous repartition
 Sequence statistics:
	Nb of sequences              	302
	Sum of sequence lengths      	90600
	Min sequence length          	0
	Max sequence length          	300
	Average sequence length      	300
	Possible positions           	90298
 Oligonucleotide statistics:
	Total occurrences    	84145
 Position interval parameters:
	Position interval    	20
	Number of windows    	16
	Total positions      	90298
	Degrees of freedom   	15
 K-mer clustering parameters:
	Number of clusters   	0
	Clustering method    	complete
 Position intervals:
	window	[min,max]	mid	seq	occ
	1	-8	[-159,-140]	-149.5	302	3020
	2	-7	[-139,-120]	-129.5	302	6040
	3	-6	[-119,-100]	-109.5	302	6040
	4	-5	[-99,-80]	-89.5	302	6040
	5	-4	[-79,-60]	-69.5	302	6040
	6	-3	[-59,-40]	-49.5	302	6040
	7	-2	[-39,-20]	-29.5	302	6040
	8	-1	[-19,0]	-9.5	302	6040
	9	0	[1,20]	10.5	302	6040
	10	1	[21,40]	30.5	302	6040
	11	2	[41,60]	50.5	302	6040
	12	3	[61,80]	70.5	302	6040
	13	4	[81,100]	90.5	302	6040
	14	5	[101,120]	110.5	302	6040
	15	6	[121,140]	130.5	302	6040
	16	7	[141,160]	150.5	302	2718

 Column headers
	1	seq            	pattern sequence
	2	id             	pattern identifier
	3	occ            	pattern occurrences
	4	chi2           	observed chi-square
	5	df             	degrees of freedom
	6	Pval           	P-value (probability for one word to be a false positive)
	7	Eval           	E-value; expected number of false positives (Eval = Pval * nb_tests)
	8	sig            	Significance (sig = -log10(Eval))
	9	rank           	rank of the pattern according to sorting criterion
	10	-149.5         	occurrences in window	1	[-159,-140]
	11	-129.5         	occurrences in window	2	[-139,-120]
	12	-109.5         	occurrences in window	3	[-119,-100]
	13	-89.5          	occurrences in window	4	[-99,-80]
	14	-69.5          	occurrences in window	5	[-79,-60]
	15	-49.5          	occurrences in window	6	[-59,-40]
	16	-29.5          	occurrences in window	7	[-39,-20]
	17	-9.5           	occurrences in window	8	[-19,0]
	18	10.5           	occurrences in window	9	[1,20]
	19	30.5           	occurrences in window	10	[21,40]
	20	50.5           	occurrences in window	11	[41,60]
	21	70.5           	occurrences in window	12	[61,80]
	22	90.5           	occurrences in window	13	[81,100]
	23	110.5          	occurrences in window	14	[101,120]
	24	130.5          	occurrences in window	15	[121,140]
	25	150.5          	occurrences in window	16	[141,160]
seq id occ chi2 df Pval Eval sig rank -149.5 -129.5 -109.5 -89.5 -69.5 -49.5 -29.5 -9.5 10.5 30.5 50.5 70.5 90.5 110.5 130.5 150.5
tt tt 8881 54.3 15 2.3e-06 3.7e-05 4.43 1 282 674 596 583 533 563 534 511 618 575 599 608 657 654 631 263
gg gg 3771 44.5 15 9.1e-05 0.0014 2.84 2 137 231 257 256 270 267 251 267 321 274 241 248 219 212 212 108
aa aa 8783 24.4 15 5.9e-02 0.94 0.03 3 293 575 560 594 582 619 567 613 528 611 625 561 633 616 571 235
gt gt 4581 24.0 15 6.4e-02 1 -0.01 4 168 300 286 271 329 292 320 309 348 290 283 319 307 314 285 160
ac ac 4420 21.2 15 1.3e-01 2.1 -0.32 5 156 282 269 277 303 326 292 299 260 301 304 341 287 283 310 130
ag ag 4518 18.3 15 2.5e-01 4 -0.60 6 140 307 316 300 340 286 341 313 295 274 297 293 288 295 286 147
ga ga 4527 16.4 15 3.6e-01 5.7 -0.76 7 148 297 325 290 315 332 337 293 283 281 312 288 309 279 294 144
cc cc 3666 15.6 15 4.1e-01 6.5 -0.82 8 116 246 251 247 216 228 228 257 243 230 267 264 252 234 259 128
ta ta 5645 15.2 15 4.4e-01 7 -0.85 9 179 395 359 341 383 377 387 403 350 399 399 363 378 395 383 154
tc tc 4666 14.3 15 5.0e-01 8 -0.90 10 160 299 301 340 288 290 305 305 340 324 303 332 298 303 325 153
cg cg 3640 13.3 15 5.8e-01 9.3 -0.97 11 117 217 244 229 231 237 247 237 245 272 262 257 248 224 255 118
at at 6840 12.1 15 6.7e-01 11 -1.03 12 235 451 443 449 426 467 464 447 446 479 482 426 467 474 490 194
tg tg 5556 11.8 15 6.9e-01 11 -1.04 13 195 348 381 352 384 381 375 367 392 361 338 361 378 393 366 184
ct ct 4445 11.4 15 7.2e-01 12 -1.06 14 126 310 292 323 302 281 285 309 302 306 277 307 285 305 294 141
gc gc 4605 11.3 15 7.3e-01 12 -1.07 15 137 277 330 319 306 281 306 315 310 322 305 314 305 324 314 140
ca ca 5601 10.0 15 8.2e-01 13 -1.12 16 196 351 350 389 367 369 372 377 359 369 386 398 369 375 408 166 
 Host name	rsat
 Job started	2026-03-24.175735
 Job done	2026-03-24.175736
 Seconds	0.59
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	system	0.01
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